Query psy15639
Match_columns 135
No_of_seqs 11 out of 13
Neff 1.7
Searched_HMMs 29240
Date Fri Aug 16 17:50:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zbd_B Rabphilin-3A; G protein 98.2 5.2E-07 1.8E-11 66.0 1.9 55 10-66 55-110 (134)
2 2zet_C Melanophilin; complex, 97.8 9.3E-06 3.2E-10 60.6 2.5 51 10-65 68-119 (153)
3 2a20_A Regulating synaptic mem 97.1 0.00024 8.3E-09 48.4 2.8 53 9-63 8-60 (62)
4 2csz_A Synaptotagmin-like prot 96.9 0.00021 7.3E-09 49.5 0.9 47 11-63 26-73 (76)
5 2yw8_A RUN and FYVE domain-con 96.6 0.0015 5.2E-08 43.1 3.3 64 6-69 15-78 (82)
6 2ect_A Ring finger protein 126 96.5 0.0012 4.1E-08 40.8 2.1 55 7-68 12-66 (78)
7 2egp_A Tripartite motif-contai 96.3 0.0024 8.1E-08 39.1 2.6 58 7-68 9-67 (79)
8 2ecm_A Ring finger and CHY zin 96.1 0.0005 1.7E-08 39.7 -1.3 51 9-65 4-54 (55)
9 2ecw_A Tripartite motif-contai 96.0 0.0016 5.5E-08 39.7 0.9 57 8-68 17-73 (85)
10 2ecv_A Tripartite motif-contai 96.0 0.0012 4E-08 40.4 0.0 57 8-68 17-73 (85)
11 1joc_A EEA1, early endosomal a 95.8 0.0059 2E-07 43.4 3.2 61 5-65 64-124 (125)
12 1iym_A EL5; ring-H2 finger, ub 95.8 0.0016 5.3E-08 37.7 0.0 49 10-64 5-53 (55)
13 3t7l_A Zinc finger FYVE domain 95.8 0.0044 1.5E-07 41.8 2.1 62 6-67 16-77 (90)
14 2ecn_A Ring finger protein 141 95.7 0.0062 2.1E-07 36.8 2.3 51 8-69 13-63 (70)
15 2ea5_A Cell growth regulator w 95.5 0.0037 1.3E-07 39.6 1.0 50 7-70 12-62 (68)
16 2l0b_A E3 ubiquitin-protein li 95.4 0.0025 8.6E-08 41.3 -0.1 51 9-66 39-89 (91)
17 1wfk_A Zinc finger, FYVE domai 95.4 0.0073 2.5E-07 40.8 2.2 61 10-70 9-70 (88)
18 1z2q_A LM5-1; membrane protein 95.1 0.011 3.8E-07 39.1 2.4 64 5-68 16-81 (84)
19 2kiz_A E3 ubiquitin-protein li 95.1 0.0035 1.2E-07 37.8 -0.0 54 8-68 12-65 (69)
20 3l11_A E3 ubiquitin-protein li 95.0 0.005 1.7E-07 40.7 0.5 72 10-93 15-86 (115)
21 2ep4_A Ring finger protein 24; 95.0 0.0035 1.2E-07 38.3 -0.3 55 8-69 13-67 (74)
22 2ysl_A Tripartite motif-contai 94.7 0.0082 2.8E-07 36.3 0.8 53 8-67 18-70 (73)
23 2yho_A E3 ubiquitin-protein li 94.6 0.0063 2.1E-07 39.3 0.1 49 11-73 19-68 (79)
24 3lrq_A E3 ubiquitin-protein li 94.3 0.0034 1.2E-07 41.3 -1.7 71 11-100 23-93 (100)
25 1we9_A PHD finger family prote 94.2 0.017 5.7E-07 35.9 1.4 55 10-65 6-60 (64)
26 2ct2_A Tripartite motif protei 94.2 0.0087 3E-07 37.0 0.0 57 8-67 13-69 (88)
27 1x4j_A Ring finger protein 38; 94.1 0.0045 1.5E-07 38.2 -1.3 52 8-66 21-72 (75)
28 2d8t_A Dactylidin, ring finger 94.0 0.013 4.3E-07 35.9 0.5 53 6-68 11-63 (71)
29 2ecg_A Baculoviral IAP repeat- 94.0 0.007 2.4E-07 37.9 -0.7 45 11-69 26-71 (75)
30 4ic3_A E3 ubiquitin-protein li 93.9 0.0083 2.8E-07 37.7 -0.4 46 11-70 25-71 (74)
31 1jm7_A BRCA1, breast cancer ty 93.8 0.017 5.7E-07 37.3 0.8 51 11-68 22-72 (112)
32 1x4u_A Zinc finger, FYVE domai 93.7 0.054 1.8E-06 35.7 3.2 64 5-68 9-80 (84)
33 2vje_B MDM4 protein; proto-onc 93.6 0.0036 1.2E-07 38.7 -2.4 55 6-68 3-58 (63)
34 2vje_A E3 ubiquitin-protein li 93.6 0.004 1.4E-07 38.6 -2.4 56 6-69 4-60 (64)
35 1e4u_A Transcriptional repress 93.4 0.024 8.1E-07 36.9 1.0 54 9-68 10-64 (78)
36 1vfy_A Phosphatidylinositol-3- 93.0 0.023 8E-07 36.7 0.6 55 11-65 12-68 (73)
37 2xb1_A Pygopus homolog 2, B-ce 92.9 0.027 9.1E-07 39.0 0.8 57 10-66 3-64 (105)
38 2ecy_A TNF receptor-associated 92.3 0.024 8.1E-07 34.1 -0.1 52 7-67 12-63 (66)
39 1chc_A Equine herpes virus-1 r 92.2 0.017 5.9E-07 34.5 -0.8 53 9-70 4-56 (68)
40 3mpx_A FYVE, rhogef and PH dom 92.0 0.028 9.6E-07 43.9 0.0 59 8-66 373-432 (434)
41 1bor_A Transcription factor PM 92.0 0.039 1.3E-06 32.9 0.6 45 10-67 6-50 (56)
42 2ri7_A Nucleosome-remodeling f 91.7 0.028 9.5E-07 40.1 -0.3 55 10-66 8-62 (174)
43 4ayc_A E3 ubiquitin-protein li 91.6 0.011 3.6E-07 40.8 -2.6 48 12-69 55-102 (138)
44 2csy_A Zinc finger protein 183 91.1 0.025 8.6E-07 35.2 -0.9 48 8-65 13-60 (81)
45 2ea6_A Ring finger protein 4; 90.9 0.009 3.1E-07 35.3 -3.0 56 6-67 11-69 (69)
46 3fl2_A E3 ubiquitin-protein li 90.9 0.024 8.2E-07 38.0 -1.2 48 11-67 53-100 (124)
47 1wep_A PHF8; structural genomi 90.9 0.074 2.5E-06 34.5 1.1 60 4-65 6-65 (79)
48 2k16_A Transcription initiatio 90.7 0.1 3.6E-06 33.1 1.7 54 11-67 19-72 (75)
49 3zyq_A Hepatocyte growth facto 90.6 0.05 1.7E-06 41.3 0.1 58 10-67 164-223 (226)
50 3t6p_A Baculoviral IAP repeat- 90.1 0.061 2.1E-06 43.7 0.2 46 10-69 295-341 (345)
51 1y02_A CARP2, FYVE-ring finger 89.9 0.15 5.2E-06 36.7 2.2 55 5-65 14-68 (120)
52 1dvp_A HRS, hepatocyte growth 89.7 0.081 2.8E-06 39.4 0.6 56 10-65 161-218 (220)
53 2ckl_B Ubiquitin ligase protei 89.2 0.036 1.2E-06 38.8 -1.6 48 12-67 56-103 (165)
54 2ecl_A Ring-box protein 2; RNF 88.5 0.049 1.7E-06 34.7 -1.1 52 10-67 15-77 (81)
55 1g25_A CDK-activating kinase a 88.5 0.027 9.2E-07 33.7 -2.3 53 11-68 4-57 (65)
56 2puy_A PHD finger protein 21A; 88.5 0.33 1.1E-05 29.9 2.7 51 10-68 5-57 (60)
57 3lqh_A Histone-lysine N-methyl 88.3 0.0092 3.2E-07 45.3 -5.5 55 11-65 3-65 (183)
58 2djb_A Polycomb group ring fin 87.8 0.042 1.4E-06 33.6 -1.8 51 9-68 14-64 (72)
59 1wee_A PHD finger family prote 87.8 0.29 1E-05 31.2 2.2 52 10-64 16-67 (72)
60 2y43_A E3 ubiquitin-protein li 87.7 0.034 1.2E-06 35.8 -2.3 48 11-67 23-70 (99)
61 2ctu_A Zinc finger protein 483 87.3 0.19 6.6E-06 28.4 1.0 37 9-68 17-53 (73)
62 2xeu_A Ring finger protein 4; 86.3 0.029 1E-06 32.6 -3.0 53 10-68 3-58 (64)
63 2d8s_A Cellular modulator of i 85.4 0.15 5.1E-06 33.4 -0.2 57 8-68 13-72 (80)
64 2yt5_A Metal-response element- 84.9 0.2 6.9E-06 30.9 0.3 57 10-67 6-65 (66)
65 2lv9_A Histone-lysine N-methyl 84.8 0.37 1.3E-05 32.7 1.6 47 12-63 30-76 (98)
66 3ng2_A RNF4, snurf, ring finge 84.2 0.038 1.3E-06 32.9 -3.2 55 7-67 7-64 (71)
67 1v87_A Deltex protein 2; ring- 84.1 0.084 2.9E-06 34.4 -1.8 56 11-67 26-95 (114)
68 3o70_A PHD finger protein 13; 84.1 0.72 2.4E-05 29.7 2.6 49 9-62 18-66 (68)
69 3v43_A Histone acetyltransfera 83.8 0.5 1.7E-05 32.2 1.9 48 12-63 63-112 (112)
70 3hct_A TNF receptor-associated 83.8 0.036 1.2E-06 37.1 -3.8 49 9-66 17-65 (118)
71 1t1h_A Gspef-atpub14, armadill 83.7 0.19 6.3E-06 30.7 -0.3 51 8-67 6-56 (78)
72 1jm7_B BARD1, BRCA1-associated 82.9 0.31 1.1E-05 32.4 0.5 45 11-66 23-67 (117)
73 3kqi_A GRC5, PHD finger protei 82.7 0.47 1.6E-05 30.5 1.3 56 10-67 10-65 (75)
74 2ee8_A Protein ODD-skipped-rel 82.4 0.3 1E-05 29.8 0.3 16 7-22 14-29 (106)
75 1wew_A DNA-binding family prot 82.2 0.56 1.9E-05 30.4 1.6 55 9-65 15-74 (78)
76 2ckl_A Polycomb group ring fin 82.2 0.15 5.2E-06 33.2 -1.2 49 10-67 15-63 (108)
77 6rxn_A Rubredoxin; electron tr 80.6 0.49 1.7E-05 29.5 0.8 14 50-63 26-39 (46)
78 2ku3_A Bromodomain-containing 80.6 0.78 2.7E-05 29.9 1.8 52 9-64 15-67 (71)
79 1wim_A KIAA0161 protein; ring 79.0 0.062 2.1E-06 34.6 -3.9 77 9-92 4-84 (94)
80 1xwh_A Autoimmune regulator; P 79.0 1.1 3.7E-05 28.2 2.0 52 9-68 7-60 (66)
81 2kgg_A Histone demethylase jar 78.4 0.2 6.8E-06 30.4 -1.5 48 12-61 4-52 (52)
82 4ap4_A E3 ubiquitin ligase RNF 78.2 0.14 4.7E-06 33.1 -2.4 54 9-68 6-62 (133)
83 1z6u_A NP95-like ring finger p 78.2 0.18 6.2E-06 35.7 -2.0 48 11-67 79-126 (150)
84 2yur_A Retinoblastoma-binding 77.9 0.33 1.1E-05 29.8 -0.6 54 7-67 12-65 (74)
85 1wem_A Death associated transc 77.4 0.36 1.2E-05 30.8 -0.6 55 10-66 16-73 (76)
86 2vpb_A Hpygo1, pygopus homolog 76.0 0.32 1.1E-05 31.3 -1.1 51 11-61 9-64 (65)
87 1ard_A Yeast transcription fac 76.0 1 3.6E-05 20.9 1.1 13 10-22 2-14 (29)
88 2jun_A Midline-1; B-BOX, TRIM, 75.0 0.66 2.3E-05 29.8 0.2 31 11-42 4-34 (101)
89 3o36_A Transcription intermedi 74.6 1.7 5.8E-05 31.3 2.3 52 10-67 4-55 (184)
90 3knv_A TNF receptor-associated 74.1 1.1 3.9E-05 31.4 1.2 47 10-65 31-77 (141)
91 2lvu_A Zinc finger and BTB dom 75.4 0.72 2.4E-05 21.5 0.0 13 10-22 2-14 (26)
92 2kwj_A Zinc finger protein DPF 72.7 2 6.8E-05 29.4 2.2 15 53-67 98-112 (114)
93 2lri_C Autoimmune regulator; Z 72.3 2 6.8E-05 27.6 2.0 54 4-63 6-59 (66)
94 3ztg_A E3 ubiquitin-protein li 71.4 0.45 1.5E-05 29.8 -1.2 52 7-65 10-61 (92)
95 2elr_A Zinc finger protein 406 71.0 2.6 8.9E-05 20.7 1.9 16 7-22 6-21 (36)
96 2l43_A N-teminal domain from h 70.3 1.5 5.1E-05 29.4 1.1 54 10-67 25-79 (88)
97 2csh_A Zinc finger protein 297 69.6 0.85 2.9E-05 28.1 -0.2 16 52-67 63-78 (110)
98 1mm2_A MI2-beta; PHD, zinc fin 69.3 4.1 0.00014 25.2 2.9 51 8-64 7-57 (61)
99 3kv5_D JMJC domain-containing 68.9 1.1 3.9E-05 38.1 0.3 56 8-65 35-90 (488)
100 2ysj_A Tripartite motif-contai 68.9 2.4 8.1E-05 24.7 1.7 31 8-42 18-48 (63)
101 2m0e_A Zinc finger and BTB dom 68.8 1.7 5.7E-05 19.9 0.8 14 10-23 2-15 (29)
102 1wev_A Riken cDNA 1110020M19; 68.3 2.5 8.7E-05 28.0 1.9 57 11-68 17-77 (88)
103 2yql_A PHD finger protein 21A; 67.6 3.8 0.00013 24.8 2.4 47 8-62 7-55 (56)
104 2kvf_A Zinc finger and BTB dom 66.8 1.2 4E-05 20.8 -0.0 13 10-22 3-15 (28)
105 1rmd_A RAG1; V(D)J recombinati 66.8 0.46 1.6E-05 31.2 -2.0 49 11-68 24-72 (116)
106 1klr_A Zinc finger Y-chromosom 66.8 2 6.8E-05 19.8 0.8 13 11-23 3-15 (30)
107 2kdx_A HYPA, hydrogenase/ureas 66.7 1.4 4.8E-05 30.2 0.4 24 11-34 74-98 (119)
108 1znf_A 31ST zinc finger from X 66.7 1.5 5.3E-05 20.1 0.4 11 12-22 3-13 (27)
109 1paa_A Yeast transcription fac 66.6 2.3 7.9E-05 19.9 1.1 12 11-22 3-14 (30)
110 2yte_A Zinc finger protein 473 66.3 2.6 8.9E-05 21.5 1.3 16 8-23 8-23 (42)
111 2m0d_A Zinc finger and BTB dom 65.8 1.4 4.9E-05 20.3 0.2 13 10-22 3-15 (30)
112 2els_A Zinc finger protein 406 65.4 2.3 7.8E-05 21.1 1.0 16 7-22 6-21 (36)
113 2lvt_A Zinc finger and BTB dom 68.8 1.3 4.5E-05 20.8 0.0 12 11-22 3-14 (29)
114 2en7_A Zinc finger protein 268 64.5 3.1 0.00011 21.4 1.4 16 8-23 10-25 (44)
115 2ytb_A Zinc finger protein 32; 64.5 3 0.0001 21.3 1.3 15 8-22 9-23 (42)
116 2elo_A Zinc finger protein 406 64.5 2.1 7E-05 21.3 0.7 15 8-22 7-21 (37)
117 2kvh_A Zinc finger and BTB dom 64.3 1.4 4.7E-05 20.6 -0.0 13 10-22 3-15 (27)
118 1p7a_A BF3, BKLF, kruppel-like 64.2 3.1 0.00011 20.6 1.3 15 8-22 9-23 (37)
119 2m0f_A Zinc finger and BTB dom 63.9 1.6 5.5E-05 20.1 0.2 12 11-22 3-14 (29)
120 3asl_A E3 ubiquitin-protein li 63.7 2.6 9E-05 27.1 1.2 48 12-63 20-69 (70)
121 2kvg_A Zinc finger and BTB dom 63.7 1.4 4.9E-05 20.8 -0.0 13 10-22 3-15 (27)
122 3o7a_A PHD finger protein 13 v 63.3 3.2 0.00011 24.9 1.5 44 15-62 8-51 (52)
123 2eos_A B-cell lymphoma 6 prote 63.0 2.8 9.7E-05 21.5 1.1 15 8-22 9-23 (42)
124 2elx_A Zinc finger protein 406 62.6 1.8 6.1E-05 21.1 0.2 15 8-22 5-19 (35)
125 2eou_A Zinc finger protein 473 61.9 3.5 0.00012 21.5 1.4 15 8-22 10-24 (44)
126 2l5u_A Chromodomain-helicase-D 61.1 7.1 0.00024 24.2 2.9 52 6-63 7-58 (61)
127 3iuf_A Zinc finger protein UBI 61.0 2.2 7.6E-05 23.4 0.4 15 8-22 5-19 (48)
128 1z60_A TFIIH basal transcripti 60.8 2.1 7.1E-05 27.8 0.3 33 11-44 16-48 (59)
129 1rim_A E6APC2 peptide; E6-bind 60.5 3 0.0001 20.8 0.9 13 10-22 2-14 (33)
130 2eop_A Zinc finger protein 268 60.4 3.8 0.00013 21.4 1.3 16 8-23 10-25 (46)
131 2ytr_A Zinc finger protein 347 60.3 3.8 0.00013 21.3 1.3 16 8-23 10-25 (46)
132 2enh_A Zinc finger protein 28 60.3 3.9 0.00013 21.5 1.4 17 8-24 10-26 (46)
133 2ecj_A Tripartite motif-contai 60.1 3.8 0.00013 23.1 1.4 32 8-43 13-44 (58)
134 3ec4_A Putative acetyltransfer 60.1 7.9 0.00027 27.4 3.3 25 77-101 4-28 (228)
135 2eoj_A Zinc finger protein 268 60.1 2.8 9.6E-05 21.7 0.7 16 8-23 10-25 (44)
136 2y1n_A E3 ubiquitin-protein li 60.0 0.94 3.2E-05 38.1 -1.8 49 11-68 333-381 (389)
137 3hcs_A TNF receptor-associated 59.9 0.59 2E-05 32.6 -2.6 49 9-66 17-65 (170)
138 3ny3_A E3 ubiquitin-protein li 59.7 3.9 0.00013 27.3 1.5 21 14-34 5-25 (75)
139 1srk_A Zinc finger protein ZFP 59.4 2.2 7.5E-05 21.0 0.2 15 8-22 5-19 (35)
140 2en9_A Zinc finger protein 28 59.2 4.1 0.00014 21.4 1.3 15 8-22 10-24 (46)
141 2eq1_A Zinc finger protein 347 58.8 4.3 0.00015 21.2 1.4 15 8-22 10-24 (46)
142 2enf_A Zinc finger protein 347 58.5 3.7 0.00013 21.5 1.1 16 8-23 10-25 (46)
143 2eq2_A Zinc finger protein 347 58.4 4 0.00014 21.4 1.2 16 8-23 10-25 (46)
144 2ro1_A Transcription intermedi 58.2 4.2 0.00014 30.0 1.7 47 11-65 3-51 (189)
145 2emg_A Zinc finger protein 484 58.2 4.4 0.00015 21.2 1.3 16 8-23 10-25 (46)
146 2epx_A Zinc finger protein 28 58.2 3.8 0.00013 21.3 1.1 17 8-24 10-26 (47)
147 2elv_A Zinc finger protein 406 58.1 2.3 8E-05 21.1 0.2 15 8-22 7-21 (36)
148 2epc_A Zinc finger protein 32; 58.1 2.4 8.2E-05 21.6 0.2 15 8-22 9-23 (42)
149 1rik_A E6APC1 peptide; E6-bind 57.8 2.1 7.1E-05 19.9 -0.0 12 11-22 3-14 (29)
150 2ytm_A Zinc finger protein 28 57.8 4.9 0.00017 21.2 1.5 16 8-23 10-25 (46)
151 2eon_A ZFP-95, zinc finger pro 57.7 4 0.00014 21.6 1.1 16 8-23 10-25 (46)
152 2ep1_A Zinc finger protein 484 57.5 4.1 0.00014 21.2 1.1 15 8-22 10-24 (46)
153 2lvr_A Zinc finger and BTB dom 62.1 2.2 7.5E-05 19.8 0.0 12 11-22 4-15 (30)
154 3nis_A E3 ubiquitin-protein li 57.3 2.7 9.2E-05 28.6 0.4 29 14-42 9-41 (82)
155 2yti_A Zinc finger protein 347 57.3 4 0.00014 21.4 1.1 15 8-22 10-24 (46)
156 1weu_A Inhibitor of growth fam 57.2 3.8 0.00013 28.2 1.2 51 10-67 36-89 (91)
157 2em6_A Zinc finger protein 224 57.2 4 0.00014 21.4 1.1 15 8-22 10-24 (46)
158 2ytn_A Zinc finger protein 347 57.2 4.7 0.00016 21.1 1.3 16 8-23 10-25 (46)
159 2eoq_A Zinc finger protein 224 57.2 4.2 0.00014 21.3 1.1 15 8-22 10-24 (46)
160 2eoh_A Zinc finger protein 28 56.7 4.3 0.00015 21.3 1.1 16 8-23 10-25 (46)
161 2eq4_A Zinc finger protein 224 56.5 5.1 0.00017 20.8 1.4 16 8-23 10-25 (46)
162 2eov_A Zinc finger protein 484 56.4 4.3 0.00015 21.1 1.1 16 8-23 10-25 (46)
163 2epr_A POZ-, at HOOK-, and zin 56.3 4.2 0.00014 21.8 1.1 19 5-23 7-25 (48)
164 2epz_A Zinc finger protein 28 56.2 4.9 0.00017 21.0 1.3 16 8-23 10-25 (46)
165 2elz_A Zinc finger protein 224 55.5 4.5 0.00016 21.2 1.1 16 8-23 10-25 (46)
166 2el5_A Zinc finger protein 268 55.5 2.8 9.7E-05 21.5 0.2 15 8-22 8-22 (42)
167 2ytq_A Zinc finger protein 268 55.4 4.5 0.00015 21.2 1.1 16 8-23 10-25 (46)
168 2emz_A ZFP-95, zinc finger pro 55.3 4.6 0.00016 21.2 1.1 16 8-23 10-25 (46)
169 2eq3_A Zinc finger protein 347 55.3 3.7 0.00013 21.4 0.7 16 8-23 10-25 (46)
170 2eom_A ZFP-95, zinc finger pro 55.0 4.7 0.00016 21.2 1.1 16 8-23 10-25 (46)
171 2yth_A Zinc finger protein 224 54.9 4.7 0.00016 21.1 1.1 16 8-23 10-25 (46)
172 2kn9_A Rubredoxin; metalloprot 54.6 5.3 0.00018 27.4 1.6 13 50-62 56-68 (81)
173 2ely_A Zinc finger protein 224 54.5 4.7 0.00016 21.1 1.1 18 8-25 10-27 (46)
174 2emk_A Zinc finger protein 28 54.5 4.9 0.00017 21.1 1.1 16 8-23 10-25 (46)
175 2elt_A Zinc finger protein 406 54.4 3 0.0001 20.5 0.2 15 8-22 7-21 (36)
176 2e6r_A Jumonji/ARID domain-con 54.4 16 0.00053 24.4 3.9 54 9-67 15-70 (92)
177 2rsd_A E3 SUMO-protein ligase 54.4 8.9 0.0003 24.0 2.5 52 12-65 12-67 (68)
178 2en2_A B-cell lymphoma 6 prote 54.3 3.5 0.00012 21.1 0.5 15 8-22 9-23 (42)
179 2elq_A Zinc finger protein 406 54.1 3 0.0001 20.6 0.2 16 7-22 6-21 (36)
180 2eoe_A Zinc finger protein 347 53.9 4.1 0.00014 21.2 0.7 16 8-23 10-25 (46)
181 3u5n_A E3 ubiquitin-protein li 53.5 3.6 0.00012 30.3 0.6 49 10-66 7-57 (207)
182 2vrw_B P95VAV, VAV1, proto-onc 53.4 6.4 0.00022 30.6 2.0 38 7-44 354-392 (406)
183 2em0_A Zinc finger protein 224 53.2 5.2 0.00018 20.9 1.1 16 8-23 10-25 (46)
184 2emy_A Zinc finger protein 268 53.2 3.2 0.00011 21.7 0.2 15 8-22 10-24 (46)
185 1njq_A Superman protein; zinc- 53.1 3.8 0.00013 20.8 0.5 14 9-22 5-18 (39)
186 2eow_A Zinc finger protein 347 53.0 3.5 0.00012 21.5 0.4 15 8-22 10-24 (46)
187 2eq0_A Zinc finger protein 347 53.0 3.6 0.00012 21.5 0.4 16 8-23 10-25 (46)
188 2eor_A Zinc finger protein 224 53.0 3.7 0.00013 21.4 0.4 15 8-22 10-24 (46)
189 2ytt_A Zinc finger protein 473 52.4 5.3 0.00018 20.9 1.1 17 7-23 9-25 (46)
190 2eoy_A Zinc finger protein 473 52.4 3.3 0.00011 21.8 0.2 16 8-23 10-25 (46)
191 2elp_A Zinc finger protein 406 52.3 3.3 0.00011 20.6 0.2 16 8-23 7-22 (37)
192 2epv_A Zinc finger protein 268 52.2 3.4 0.00012 21.6 0.2 15 8-22 10-24 (44)
193 2kfq_A FP1; protein, de novo p 52.1 3.8 0.00013 20.2 0.4 11 11-21 3-13 (32)
194 2emx_A Zinc finger protein 268 51.7 3.5 0.00012 21.4 0.2 16 8-23 8-23 (44)
195 2emh_A Zinc finger protein 484 51.5 4 0.00014 21.3 0.4 16 8-23 10-25 (46)
196 2eox_A Zinc finger protein 473 51.3 3.6 0.00012 21.4 0.2 16 8-23 10-25 (44)
197 4bbq_A Lysine-specific demethy 51.3 6.1 0.00021 26.2 1.4 36 27-62 76-113 (117)
198 1v5n_A PDI-like hypothetical p 50.9 5.8 0.0002 26.5 1.3 36 10-47 47-82 (89)
199 3shb_A E3 ubiquitin-protein li 50.7 6.5 0.00022 25.9 1.5 47 12-62 28-76 (77)
200 2emi_A Zinc finger protein 484 50.6 3.7 0.00013 21.5 0.2 15 8-22 10-24 (46)
201 2ytp_A Zinc finger protein 484 50.5 3.7 0.00013 21.6 0.2 15 8-22 10-24 (46)
202 2em7_A Zinc finger protein 224 50.5 3.7 0.00013 21.5 0.2 16 8-23 10-25 (46)
203 2elm_A Zinc finger protein 406 50.5 2.5 8.7E-05 21.5 -0.5 15 8-22 7-21 (37)
204 2yso_A ZFP-95, zinc finger pro 50.0 4.3 0.00015 21.2 0.4 16 8-23 10-25 (46)
205 2en8_A Zinc finger protein 224 49.9 4.4 0.00015 21.1 0.5 16 8-23 10-25 (46)
206 2ytg_A ZFP-95, zinc finger pro 49.8 4.5 0.00015 21.1 0.5 17 8-24 10-26 (46)
207 2eof_A Zinc finger protein 268 49.7 4.4 0.00015 20.8 0.4 16 8-23 10-25 (44)
208 2yu5_A Zinc finger protein 473 49.7 3.9 0.00013 21.2 0.2 17 8-24 10-26 (44)
209 2yts_A Zinc finger protein 484 49.7 3.9 0.00013 21.3 0.2 15 8-22 10-24 (46)
210 2emb_A Zinc finger protein 473 49.7 4.5 0.00015 20.9 0.5 15 8-22 10-24 (44)
211 2em3_A Zinc finger protein 28 49.6 4 0.00014 21.4 0.2 16 8-23 10-25 (46)
212 2enc_A Zinc finger protein 224 49.6 3.9 0.00013 21.4 0.2 16 8-23 10-25 (46)
213 2ytf_A Zinc finger protein 268 49.5 3.9 0.00013 21.3 0.2 15 8-22 10-24 (46)
214 2em9_A Zinc finger protein 224 49.5 3.9 0.00013 21.3 0.2 16 8-23 10-25 (46)
215 2yrm_A B-cell lymphoma 6 prote 49.5 6.4 0.00022 20.5 1.1 15 8-22 8-22 (43)
216 2en1_A Zinc finger protein 224 49.4 4 0.00014 21.3 0.2 16 8-23 10-25 (46)
217 2emj_A Zinc finger protein 28 49.3 4 0.00014 21.5 0.2 15 8-22 10-24 (46)
218 4b6d_A RAC GTPase-activating p 48.9 4.9 0.00017 25.4 0.6 33 7-39 16-51 (61)
219 2eoo_A ZFP-95, zinc finger pro 48.8 4 0.00014 21.4 0.2 16 8-23 10-25 (46)
220 2eoz_A Zinc finger protein 473 48.7 4.2 0.00015 21.3 0.3 16 8-23 10-25 (46)
221 2em4_A Zinc finger protein 28 48.6 4.2 0.00015 21.3 0.3 16 8-23 10-25 (46)
222 2emp_A Zinc finger protein 347 48.6 4.2 0.00014 21.3 0.2 16 8-23 10-25 (46)
223 1fv5_A First zinc finger of U- 48.5 5.4 0.00018 22.3 0.7 15 8-22 6-20 (36)
224 3tov_A Glycosyl transferase fa 48.5 5.7 0.0002 30.4 1.1 27 74-100 17-43 (349)
225 2ytk_A Zinc finger protein 347 48.4 4.3 0.00015 21.2 0.3 15 8-22 10-24 (46)
226 2ept_A Zinc finger protein 32; 48.4 4.2 0.00014 20.8 0.2 15 8-22 8-22 (41)
227 2epw_A Zinc finger protein 268 48.3 4.2 0.00014 21.2 0.2 16 8-23 10-25 (46)
228 2yrj_A Zinc finger protein 473 48.2 4.2 0.00014 21.2 0.2 15 8-22 10-24 (46)
229 2epu_A Zinc finger protein 32; 48.1 4.4 0.00015 21.2 0.3 15 8-22 10-24 (45)
230 2lce_A B-cell lymphoma 6 prote 48.1 8.9 0.0003 21.9 1.6 47 5-67 12-58 (74)
231 2el4_A Zinc finger protein 268 47.9 4.3 0.00015 21.1 0.2 16 8-23 10-25 (46)
232 2eml_A Zinc finger protein 28 47.8 4.4 0.00015 21.2 0.2 15 8-22 10-24 (46)
233 3a43_A HYPD, hydrogenase nicke 47.8 3.2 0.00011 29.6 -0.4 14 11-24 71-84 (139)
234 2emf_A Zinc finger protein 484 47.7 4.4 0.00015 21.3 0.2 16 8-23 10-25 (46)
235 2yu8_A Zinc finger protein 347 47.6 4.5 0.00015 21.2 0.2 17 8-24 10-26 (46)
236 1f62_A Transcription factor WS 47.6 6.3 0.00021 23.1 0.9 46 12-62 2-49 (51)
237 4a0k_B E3 ubiquitin-protein li 47.4 4 0.00014 28.7 0.0 48 11-64 49-110 (117)
238 2ytj_A Zinc finger protein 484 47.4 4.5 0.00015 21.1 0.2 16 8-23 10-25 (46)
239 2en6_A Zinc finger protein 268 47.1 4.6 0.00016 21.1 0.3 16 8-23 10-25 (46)
240 2ysp_A Zinc finger protein 224 46.9 4.7 0.00016 21.1 0.3 16 8-23 10-25 (46)
241 2emm_A ZFP-95, zinc finger pro 46.7 4.6 0.00016 21.0 0.2 15 8-22 10-24 (46)
242 2em5_A ZFP-95, zinc finger pro 46.6 4.7 0.00016 21.2 0.2 15 8-22 10-24 (46)
243 1sp2_A SP1F2; zinc finger, tra 46.6 7 0.00024 18.6 0.9 12 11-22 3-16 (31)
244 2ene_A Zinc finger protein 347 46.2 4.9 0.00017 21.0 0.3 16 8-23 10-25 (46)
245 2em8_A Zinc finger protein 224 46.1 4.9 0.00017 21.1 0.2 15 8-22 10-24 (46)
246 2ep2_A Zinc finger protein 484 46.1 4.8 0.00016 21.0 0.2 15 8-22 10-24 (46)
247 2en3_A ZFP-95, zinc finger pro 46.0 4.8 0.00017 21.0 0.2 16 8-23 10-25 (46)
248 2yto_A Zinc finger protein 484 45.9 4.8 0.00017 21.1 0.2 15 8-22 10-24 (46)
249 2epq_A POZ-, at HOOK-, and zin 45.9 6.5 0.00022 20.5 0.7 16 7-22 7-22 (45)
250 2eme_A Zinc finger protein 473 45.7 4.9 0.00017 20.9 0.2 16 8-23 10-25 (46)
251 2gt1_A Lipopolysaccharide hept 45.5 6 0.0002 28.9 0.7 25 76-100 11-35 (326)
252 3uk3_C Zinc finger protein 217 45.2 7.1 0.00024 21.0 0.8 42 9-66 3-44 (57)
253 3gj3_B Nuclear pore complex pr 45.2 6.1 0.00021 23.0 0.6 11 51-61 4-14 (33)
254 2eps_A POZ-, at HOOK-, and zin 45.2 7.9 0.00027 21.3 1.1 12 10-21 41-52 (54)
255 2em2_A Zinc finger protein 28 45.1 5.1 0.00017 21.0 0.2 16 8-23 10-25 (46)
256 2ep3_A Zinc finger protein 484 45.0 5.1 0.00017 20.9 0.2 16 8-23 10-25 (46)
257 1e8j_A Rubredoxin; iron-sulfur 45.0 6.9 0.00024 24.4 0.9 13 50-62 32-44 (52)
258 2ep0_A Zinc finger protein 28 44.9 5.1 0.00018 20.9 0.2 16 8-23 10-25 (46)
259 2ysm_A Myeloid/lymphoid or mix 44.8 10 0.00034 25.2 1.7 50 12-64 56-105 (111)
260 2ema_A Zinc finger protein 347 44.8 5.2 0.00018 20.9 0.2 16 8-23 10-25 (46)
261 1wen_A Inhibitor of growth fam 44.5 7.6 0.00026 25.1 1.0 52 9-67 15-69 (71)
262 3gj5_B Nuclear pore complex pr 44.5 6.3 0.00022 23.2 0.6 11 51-61 4-14 (34)
263 1psw_A ADP-heptose LPS heptosy 44.3 6.4 0.00022 28.6 0.7 24 77-100 12-35 (348)
264 2ytd_A Zinc finger protein 473 43.3 5.6 0.00019 20.7 0.2 16 8-23 10-25 (46)
265 2ab3_A ZNF29; zinc finger prot 43.1 4.7 0.00016 18.4 -0.1 12 11-22 3-16 (29)
266 3c6w_A P28ING5, inhibitor of g 43.0 8.9 0.0003 23.8 1.1 46 11-63 10-58 (59)
267 2el6_A Zinc finger protein 268 42.9 5.7 0.0002 20.8 0.2 16 8-23 10-25 (46)
268 2cot_A Zinc finger protein 435 42.8 14 0.00048 21.2 1.9 46 6-67 14-59 (77)
269 1zfd_A SWI5; DNA binding motif 42.7 8.8 0.0003 18.2 0.9 14 10-23 3-18 (32)
270 1dl6_A Transcription factor II 42.6 7.1 0.00024 24.4 0.6 32 36-68 13-44 (58)
271 2adr_A ADR1; transcription reg 42.0 9.5 0.00032 20.7 1.0 42 10-67 2-43 (60)
272 1yui_A GAGA-factor; complex (D 40.6 7.5 0.00026 21.3 0.5 14 9-22 23-36 (54)
273 3i2d_A E3 SUMO-protein ligase 40.1 2.1 7.2E-05 36.1 -2.8 37 27-65 263-299 (371)
274 2e6s_A E3 ubiquitin-protein li 40.0 10 0.00034 24.9 1.1 8 54-61 68-75 (77)
275 3kv4_A PHD finger protein 8; e 39.5 3.8 0.00013 34.8 -1.3 52 15-67 9-60 (447)
276 3ask_A E3 ubiquitin-protein li 39.0 12 0.0004 29.6 1.5 9 54-62 216-224 (226)
277 1dx8_A Rubredoxin; electron tr 38.6 8.8 0.0003 25.3 0.6 15 49-63 35-49 (70)
278 2vnf_A ING 4, P29ING4, inhibit 37.2 13 0.00044 23.0 1.2 47 10-63 10-59 (60)
279 4gzn_C ZFP-57, zinc finger pro 36.8 8 0.00027 23.3 0.2 43 9-67 3-45 (60)
280 4fo9_A E3 SUMO-protein ligase 35.9 2.4 8.4E-05 35.6 -3.0 34 30-65 232-265 (360)
281 1fp0_A KAP-1 corepressor; PHD 35.8 22 0.00074 24.3 2.3 47 8-62 23-71 (88)
282 2epp_A POZ-, at HOOK-, and zin 35.5 22 0.00074 22.1 2.1 16 7-22 10-25 (66)
283 3htk_C E3 SUMO-protein ligase 34.6 6.5 0.00022 31.9 -0.6 53 9-68 180-234 (267)
284 1f2i_G Fusion of N-terminal 17 33.4 11 0.00038 21.3 0.4 14 7-20 16-31 (73)
285 2ct1_A Transcriptional repress 32.8 12 0.0004 21.6 0.4 46 8-67 13-58 (77)
286 1x5w_A Zinc finger protein 64, 32.3 14 0.00047 20.9 0.7 45 7-67 6-50 (70)
287 3f3q_A Thioredoxin-1; His TAG, 32.1 29 0.00099 21.2 2.2 16 84-99 44-59 (109)
288 1x4i_A Inhibitor of growth pro 32.1 18 0.00062 23.2 1.3 50 11-67 7-59 (70)
289 2drp_A Protein (tramtrack DNA- 31.7 13 0.00043 20.6 0.4 13 9-21 39-51 (66)
290 2lv2_A Insulinoma-associated p 31.5 17 0.00057 23.2 1.1 17 52-68 54-70 (85)
291 2qsx_A Putative transcriptiona 31.3 20 0.0007 23.8 1.5 21 80-100 32-52 (218)
292 2ctd_A Zinc finger protein 512 30.6 16 0.00054 23.0 0.9 9 12-20 36-44 (96)
293 1yuz_A Nigerythrin; rubrythrin 29.4 16 0.00054 27.4 0.8 16 50-65 167-182 (202)
294 3a9j_C Mitogen-activated prote 29.3 19 0.00066 19.9 1.0 13 50-62 4-16 (34)
295 1gh9_A 8.3 kDa protein (gene M 28.8 12 0.00041 24.9 0.0 42 36-83 6-47 (71)
296 1bbo_A Human enhancer-binding 28.2 18 0.0006 19.3 0.7 40 12-67 3-42 (57)
297 2co8_A NEDD9 interacting prote 27.9 51 0.0017 20.3 2.9 18 9-26 14-31 (82)
298 2gqj_A Zinc finger protein KIA 27.9 24 0.00082 21.6 1.3 14 8-21 22-35 (98)
299 3k7a_M Transcription initiatio 27.9 26 0.00088 27.6 1.8 33 36-68 23-56 (345)
300 2epa_A Krueppel-like factor 10 27.5 23 0.0008 19.9 1.1 19 5-23 12-32 (72)
301 2d9h_A Zinc finger protein 692 27.3 15 0.0005 21.1 0.2 47 8-67 5-51 (78)
302 1va1_A Transcription factor SP 27.3 14 0.0005 18.4 0.2 15 8-22 6-22 (37)
303 2c6a_A Ubiquitin-protein ligas 27.1 19 0.00064 22.9 0.7 23 43-66 2-24 (46)
304 2d9g_A YY1-associated factor 2 26.6 20 0.00068 22.3 0.8 11 51-61 8-18 (53)
305 4gne_A Histone-lysine N-methyl 26.5 23 0.0008 24.7 1.2 38 13-57 61-98 (107)
306 3ky9_A Proto-oncogene VAV; cal 26.5 29 0.001 28.6 2.0 38 7-44 526-564 (587)
307 2ffw_A Midline-1; B-BOX, ring 26.4 29 0.001 22.2 1.6 32 10-42 30-61 (78)
308 4rxn_A Rubredoxin; electron tr 26.4 16 0.00056 23.1 0.4 14 50-63 32-45 (54)
309 1yk4_A Rubredoxin, RD; electro 26.3 19 0.00064 22.4 0.6 14 50-63 31-44 (52)
310 2jmi_A Protein YNG1, ING1 homo 26.0 35 0.0012 23.2 2.0 49 10-65 26-78 (90)
311 1pft_A TFIIB, PFTFIIBN; N-term 25.4 34 0.0012 19.9 1.6 30 36-66 7-36 (50)
312 2g6q_A Inhibitor of growth pro 24.4 30 0.001 21.6 1.3 48 10-64 11-61 (62)
313 1x6e_A Zinc finger protein 24; 23.8 18 0.00063 20.5 0.2 44 8-67 12-55 (72)
314 2k0a_A PRE-mRNA-splicing facto 23.8 23 0.00079 26.0 0.8 62 10-76 29-96 (109)
315 2v3b_B Rubredoxin 2, rubredoxi 23.6 22 0.00074 22.3 0.5 14 50-63 32-45 (55)
316 1vd4_A Transcription initiatio 23.3 19 0.00064 20.5 0.1 27 8-34 12-47 (62)
317 2ghf_A ZHX1, zinc fingers and 23.1 22 0.00074 23.4 0.5 19 4-22 12-30 (102)
318 2dmi_A Teashirt homolog 3; zin 22.9 30 0.001 21.0 1.1 8 13-20 53-60 (115)
319 2eln_A Zinc finger protein 406 22.8 19 0.00067 19.9 0.2 15 8-22 7-23 (38)
320 2yvr_A Transcription intermedi 22.8 15 0.0005 21.0 -0.4 19 24-42 16-34 (50)
321 1ovx_A ATP-dependent CLP prote 22.7 19 0.00063 24.1 0.1 22 52-74 16-37 (67)
322 2eod_A TNF receptor-associated 22.7 16 0.00054 20.6 -0.2 15 7-21 7-21 (66)
323 1bhi_A CRE-BP1, ATF-2; CRE bin 22.6 22 0.00075 17.5 0.3 14 9-22 5-20 (38)
324 2kmk_A Zinc finger protein GFI 22.4 23 0.00078 19.9 0.4 9 12-20 31-39 (82)
325 2dlq_A GLI-kruppel family memb 22.1 45 0.0016 20.0 1.8 15 7-21 4-18 (124)
326 2ehe_A Four and A half LIM dom 21.7 36 0.0012 20.5 1.3 13 54-66 43-55 (82)
327 2jtn_A LIM domain-binding prot 21.6 34 0.0012 24.0 1.3 12 55-66 148-159 (182)
328 3kos_A HTH-type transcriptiona 21.5 38 0.0013 21.7 1.4 19 82-100 27-45 (219)
329 2ct0_A Non-SMC element 1 homol 21.2 30 0.001 22.4 0.9 53 8-68 13-66 (74)
330 2dmd_A Zinc finger protein 64, 21.1 41 0.0014 19.6 1.4 15 8-22 6-20 (96)
331 2ebq_A Nuclear pore complex pr 20.7 35 0.0012 21.3 1.1 10 52-61 9-18 (47)
332 3hhf_B Transcriptional regulat 20.6 41 0.0014 21.1 1.4 21 81-101 21-41 (213)
333 1llm_C Chimera of ZIF23-GCN4; 20.4 24 0.00081 20.7 0.2 13 10-22 3-15 (88)
334 3jv9_A OXYR, transcriptional r 20.3 45 0.0015 21.0 1.5 20 81-100 18-37 (219)
335 2ql3_A Probable transcriptiona 20.3 42 0.0014 21.3 1.4 19 81-99 19-37 (209)
336 2wbt_A B-129; zinc finger; 2.7 20.3 24 0.00082 22.0 0.2 15 9-23 73-87 (129)
337 2yt9_A Zinc finger-containing 20.1 30 0.001 20.1 0.6 17 7-23 4-20 (95)
338 1nj3_A NPL4; NZF domain, rubre 20.0 29 0.001 18.8 0.5 11 51-61 3-13 (31)
No 1
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=98.17 E-value=5.2e-07 Score=66.01 Aligned_cols=55 Identities=24% Similarity=0.669 Sum_probs=45.3
Q ss_pred CCCchhhccccC-CCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 10 LGNCRVCLKSFK-PDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 10 ~g~CRVClKsfk-P~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
...|-+|.+.|. -+...++|.+|+++||.+|..|+... .....|.|.+|+....-
T Consensus 55 ~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~--~~~~~W~C~vC~k~rel 110 (134)
T 1zbd_B 55 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNN--RPHPVWLCKICLEQREV 110 (134)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCS--SSSCCEEEHHHHHHHHH
T ss_pred CccccccCCCcccccCCCCCCCCCCcccccccCCccCCC--CCccceechhhHHHHHH
Confidence 356999999994 66678999999999999999998643 34678999999987543
No 2
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=97.78 E-value=9.3e-06 Score=60.57 Aligned_cols=51 Identities=27% Similarity=0.677 Sum_probs=42.7
Q ss_pred CCCchhhccccCCC-CccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 10 LGNCRVCLKSFKPD-DYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 10 ~g~CRVClKsfkP~-e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
...|-+|.+.|+.- .-.++|.+|+++||-.|..|++. ...|.|.+|+....
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~-----~~~W~C~vC~k~re 119 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPE-----EQGWLCDPCHLARV 119 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSS-----SSSCEEHHHHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccccccCC-----CCcEeeHHHHHHHH
Confidence 56799999988643 55789999999999999999873 46899999997654
No 3
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=97.14 E-value=0.00024 Score=48.40 Aligned_cols=53 Identities=26% Similarity=0.743 Sum_probs=46.9
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
-...|.||+|.=-.|..-|+|.-|+-++|--|-.+-.+.. .-..|.|++||++
T Consensus 8 d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~--~k~~WvC~lC~k~ 60 (62)
T 2a20_A 8 DAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRS--NKVMWVCNLCRKQ 60 (62)
T ss_dssp CCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESST--TCEEEEEHHHHHH
T ss_pred CcchhhhhccceeccCCCccccccCCeeecccCCEeeecC--CeEEEEehhhhhc
Confidence 3567999999988999999999999999999999988754 3678999999975
No 4
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.91 E-value=0.00021 Score=49.45 Aligned_cols=47 Identities=30% Similarity=0.800 Sum_probs=37.9
Q ss_pred CCchhhccccCC-CCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 11 GNCRVCLKSFKP-DDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 11 g~CRVClKsfkP-~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
-.|--|.++|-. ..-.-+|..|+++||-+|-.|++. ..|.|.||-.-
T Consensus 26 r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~~~~------~~W~C~VC~k~ 73 (76)
T 2csz_A 26 RTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQESN------GTWRCKVCSGP 73 (76)
T ss_dssp CBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEECST------TCEEEHHHHSS
T ss_pred cchhhhCccccccccCCCcCcccChhhcccccccCCC------CCEEEeeCchh
Confidence 358888888853 345678999999999999999865 68999999653
No 5
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=96.61 E-value=0.0015 Score=43.14 Aligned_cols=64 Identities=22% Similarity=0.458 Sum_probs=50.0
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
|..-...|.+|.+.|..-.-.|-|-.|.+.||.+|.++...-.......--|..|-.+|..|.+
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~~~~ 78 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLLQRCS 78 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCEEECCTTCSSCEEECHHHHHHTTC---
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCCeeecCCCCCcCEECHHHHHHHHHhcc
Confidence 4455678999999999888889999999999999999864333345667889999998877753
No 6
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.50 E-value=0.0012 Score=40.75 Aligned_cols=55 Identities=18% Similarity=0.413 Sum_probs=40.1
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
......|.||+..|...+...+- .|.|..|.+|..-.-. ...+|.+||.++..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~-~C~H~fc~~Ci~~~~~------~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQL-PCNHLFHDSCIVPWLE------QHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEEC-TTSCEEETTTTHHHHT------TTCSCTTTCCCCCCSC
T ss_pred CCCCCCCeeCCccccCCCCEEEe-CCCCeecHHHHHHHHH------cCCcCcCcCCccCCcc
Confidence 44567899999999876644332 4999999999753221 1248999999988766
No 7
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=96.29 E-value=0.0024 Score=39.06 Aligned_cols=58 Identities=16% Similarity=0.409 Sum_probs=39.7
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccc-cCCCCCCCCCceeehhhhhhhhccc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASY-SKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASY-Skl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
......|.||+..|+- ... ..|.|..|.+|..- .+.........-+|.+||..+....
T Consensus 9 ~~~~~~C~IC~~~~~~--p~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 67 (79)
T 2egp_A 9 VQEEVTCPICLELLTE--PLS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67 (79)
T ss_dssp CCCCCEETTTTEECSS--CCC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSG
T ss_pred cccCCCCcCCCcccCC--eeE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhh
Confidence 3445679999999864 322 27999999999863 2222222345679999999887643
No 8
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=96.08 E-value=0.0005 Score=39.70 Aligned_cols=51 Identities=16% Similarity=0.455 Sum_probs=37.9
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
....|.||+..|+.++-..+-..|.|..|.+|..---.. ..+|.+||+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~------~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE------GYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH------TCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc------CCcCCCCCCcCC
Confidence 356899999999876655666779999999998532111 168999998764
No 9
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.04 E-value=0.0016 Score=39.72 Aligned_cols=57 Identities=18% Similarity=0.489 Sum_probs=39.0
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.....|.||+..|+--- + ..|.|..|.+|..-.-.....+.....|.+||..+....
T Consensus 17 ~~~~~C~IC~~~~~~p~---~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPV---S-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGN 73 (85)
T ss_dssp CTTTSCTTTCSCCSSCE---E-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTC
T ss_pred ccCCCCcCCChhhCcce---e-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHh
Confidence 34568999999986432 2 359999999997532211112345789999999887543
No 10
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.98 E-value=0.0012 Score=40.37 Aligned_cols=57 Identities=19% Similarity=0.520 Sum_probs=38.2
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.....|.||+..|+- ...+ .|.|..|.+|..-.-.....+....+|.+||..+....
T Consensus 17 ~~~~~C~IC~~~~~~--p~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 17 KEEVTCPICLELLTQ--PLSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCCTTTCSCCSS--CBCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred cCCCCCCCCCcccCC--ceeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 345689999999864 3333 79999999997432111001123678999999987654
No 11
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=95.84 E-value=0.0059 Score=43.38 Aligned_cols=61 Identities=23% Similarity=0.538 Sum_probs=48.5
Q ss_pred CCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 5 KPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
.|..-...|.+|.+.|..---.|-|--|.+-||..|.++...-.......-.|..|-.+|+
T Consensus 64 ~~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~~~~p~~~~p~RVC~~C~~~l~ 124 (125)
T 1joc_A 64 AEDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKNALTPSSKKPVRVCDACFNDLQ 124 (125)
T ss_dssp CCGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEECCTTCSSCEEECHHHHHHTT
T ss_pred ccCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCCccccCCCCCCCEeCHHHHHHhc
Confidence 3455667899999999987778999999999999999987544444556677888877664
No 12
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=95.80 E-value=0.0016 Score=37.71 Aligned_cols=49 Identities=20% Similarity=0.492 Sum_probs=37.9
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
...|.||+..|..++...+-..|.|..|.+|..-.- ....+|.+||+.+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~------~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWL------GSHSTCPLCRLTV 53 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTT------TTCCSCSSSCCCS
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHH------HcCCcCcCCCCEe
Confidence 467999999999988777766799999999974321 1235799999764
No 13
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=95.76 E-value=0.0044 Score=41.76 Aligned_cols=62 Identities=18% Similarity=0.446 Sum_probs=48.5
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
|..-...|.+|.+.|..-.-.|.|-.|.+.||.+|.++...-...+...-.|..|-.+|...
T Consensus 16 ~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~~l~~~~~~~RVC~~C~~~l~~~ 77 (90)
T 3t7l_A 16 PDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKCKLQYLEKEARVCVVCYETISKA 77 (90)
T ss_dssp CGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEEEETTTTEEEEECHHHHHHHHHH
T ss_pred ccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCeeecCCCCCCCeECHHHHHHHHHH
Confidence 44456679999999998777899999999999999998754333335567788998877644
No 14
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.66 E-value=0.0062 Score=36.81 Aligned_cols=51 Identities=18% Similarity=0.542 Sum_probs=38.4
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
.....|.||+..|+. +-..|.|..|.+|..---. ...+|.+||..+.+...
T Consensus 13 ~~~~~C~IC~~~~~~-----~~~~CgH~fc~~Ci~~~~~------~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-----LILPCAHSFCQKCIDKWSD------RHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCSSSCCSCCS-----EEETTTEEECHHHHHHSSC------CCSSCHHHHHCTTCCCC
T ss_pred CCCCCCeeCCcCccC-----cccCCCCcccHHHHHHHHH------CcCcCCCcCCcccCCCc
Confidence 445789999999876 3356899999999853211 36789999999886653
No 15
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.52 E-value=0.0037 Score=39.55 Aligned_cols=50 Identities=22% Similarity=0.567 Sum_probs=38.0
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhccccc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQP 70 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp 70 (135)
......|.||+..++ .-+-.-|.|. .|.+|+. ..+.|.+||..+..+++=
T Consensus 12 ~~~~~~C~IC~~~~~----~~v~~pCgH~~~C~~C~~----------~~~~CP~CR~~i~~~~~i 62 (68)
T 2ea5_A 12 EENSKDCVVCQNGTV----NWVLLPCRHTCLCDGCVK----------YFQQCPMCRQFVQESFAL 62 (68)
T ss_dssp CCCSSCCSSSSSSCC----CCEETTTTBCCSCTTHHH----------HCSSCTTTCCCCCCEECC
T ss_pred CCCCCCCCCcCcCCC----CEEEECCCChhhhHHHHh----------cCCCCCCCCcchhceEEe
Confidence 344678999998654 2334579999 9999997 248999999999887643
No 16
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=95.39 E-value=0.0025 Score=41.29 Aligned_cols=51 Identities=20% Similarity=0.445 Sum_probs=38.0
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
....|.||+..|..++...+-. |.|..|.+|..---.. .-.|.+||+.+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~-C~H~Fh~~Ci~~wl~~------~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELP-CHHYFHKPCVSIWLQK------SGTCPVCRCMFPP 89 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEET-TTEEEEHHHHHHHHTT------TCBCTTTCCBSSC
T ss_pred CCCCCcccChhhcCCCcEEecC-CCChHHHHHHHHHHHc------CCcCcCcCccCCC
Confidence 3456999999999988766554 9999999997532211 2389999988754
No 17
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=95.38 E-value=0.0073 Score=40.84 Aligned_cols=61 Identities=20% Similarity=0.442 Sum_probs=48.2
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccC-CCCCCCCCceeehhhhhhhhccccc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSK-LDENQDENTWRCSICRRKLQSRAQP 70 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSk-l~~~ed~~~WrCSvCRRK~~sr~qp 70 (135)
...|.+|.+.|..-.-.|-|-.|.+.+|.+|.++.. ++.......-.|..|-.+|..+..+
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~lp~~g~~~~RVC~~C~~~l~~~~~~ 70 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRGSSD 70 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEEEEETTTTSEEEEECHHHHHHHHHCCCC
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcCCceeccccCCCcCEECHHHHHHHHhcccc
Confidence 457999999999888889999999999999999843 3322234567799999988877644
No 18
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=95.13 E-value=0.011 Score=39.09 Aligned_cols=64 Identities=20% Similarity=0.387 Sum_probs=49.4
Q ss_pred CCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCC-CCCC-CCCceeehhhhhhhhccc
Q psy15639 5 KPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKL-DENQ-DENTWRCSICRRKLQSRA 68 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl-~~~e-d~~~WrCSvCRRK~~sr~ 68 (135)
.|......|.+|.+.|..-.-.|-|-.|.+.||.+|.++... +... ....--|..|-.++.+..
T Consensus 16 ~pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~~~~ 81 (84)
T 1z2q_A 16 QEDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHRAAIPMRGITEPERVCDACYLALRSSN 81 (84)
T ss_dssp CCTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCEEEETTTTEEEEEECCHHHHHHHHTSC
T ss_pred ccCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCeEeccCCCCCCCCEECHHHHHHHhhcc
Confidence 345567789999999998888899999999999999998532 2211 344667999988877654
No 19
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=95.13 E-value=0.0035 Score=37.80 Aligned_cols=54 Identities=19% Similarity=0.493 Sum_probs=37.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.....|.||+..|..++...+ ..|.|..|.+|..---.. ..+|.+||..+....
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~-~~C~H~fc~~Ci~~~~~~------~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRR-LPCMHLFHQVCVDQWLIT------NKKCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEE-CTTSCEEEHHHHHHHHHH------CSBCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEE-eCCCCHHHHHHHHHHHHc------CCCCcCcCccccCcC
Confidence 445689999999987654433 359999999997421111 236999999876644
No 20
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=95.04 E-value=0.005 Score=40.73 Aligned_cols=72 Identities=19% Similarity=0.525 Sum_probs=44.7
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccccccccccccccccchHHHHHH
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPVLSQNSTDSLLDVPVLEAL 89 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp~~~q~stds~l~vpvleal 89 (135)
...|.||+.-|. +...+ .|.|..|.+|..-.-. .....|.+||..+.....+. ...+..++.-+.+.+
T Consensus 15 ~~~C~iC~~~~~--~p~~~--~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~~~~~---~~~~~~~n~~l~~~i 82 (115)
T 3l11_A 15 ECQCGICMEILV--EPVTL--PCNHTLCKPCFQSTVE-----KASLCCPFCRRRVSSWTRYH---TRRNSLVNVELWTII 82 (115)
T ss_dssp HHBCTTTCSBCS--SCEEC--TTSCEECHHHHCCCCC-----TTTSBCTTTCCBCHHHHHHH---HHTTCCBCHHHHHHH
T ss_pred CCCCccCCcccC--ceeEc--CCCCHHhHHHHHHHHh-----HCcCCCCCCCcccCcccccc---ccccchhhHHHHHHH
Confidence 356999999886 34344 7999999999753321 23478999999887632111 112234445555555
Q ss_pred Hhhc
Q psy15639 90 QRRH 93 (135)
Q Consensus 90 qrrh 93 (135)
++-.
T Consensus 83 ~~~~ 86 (115)
T 3l11_A 83 QKHY 86 (115)
T ss_dssp HHHS
T ss_pred HHHC
Confidence 4443
No 21
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.01 E-value=0.0035 Score=38.28 Aligned_cols=55 Identities=27% Similarity=0.507 Sum_probs=39.5
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
.-...|.||+..|...+...+. .|.|..|.+|..---.. ..+|.+||+.+..-.+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~~------~~~CP~Cr~~~~~~~~ 67 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLEV------RKVCPLCNMPVLQLAQ 67 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHHH------CSBCTTTCCBCSSCCS
T ss_pred CCCCCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHHc------CCcCCCcCcccccccc
Confidence 3456899999999887766554 49999999997532111 1279999998866543
No 22
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.72 E-value=0.0082 Score=36.25 Aligned_cols=53 Identities=15% Similarity=0.538 Sum_probs=37.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.....|.||+..|+ +...+ .|.|..|.+|..-.-.. ....-+|.+||..+...
T Consensus 18 ~~~~~C~IC~~~~~--~~~~~--~CgH~fC~~Ci~~~~~~---~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 18 QEEVICPICLDILQ--KPVTI--DCGHNFCLKCITQIGET---SCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCBCTTTCSBCS--SEEEC--TTCCEEEHHHHHHHCSS---SCSCCCCSSSCCCCCCC
T ss_pred ccCCEeccCCcccC--CeEEc--CCCChhhHHHHHHHHHc---CCCCCCCCCCCCcCCcc
Confidence 44568999999887 33333 89999999998643321 13456899999887643
No 23
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=94.61 E-value=0.0063 Score=39.34 Aligned_cols=49 Identities=24% Similarity=0.564 Sum_probs=36.3
Q ss_pred CCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhcccccccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPVLS 73 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp~~~ 73 (135)
..|.||+..++- -+=.-|.|. .|.+|+.- .|.|.+||..+..+.+-+++
T Consensus 19 ~~C~IC~~~~~~----~v~~pCgH~~~C~~C~~~----------~~~CP~Cr~~i~~~~~i~~p 68 (79)
T 2yho_A 19 MLCMVCCEEEIN----STFCPCGHTVCCESCAAQ----------LQSCPVCRSRVEHVQHVYLP 68 (79)
T ss_dssp TBCTTTSSSBCC----EEEETTCBCCBCHHHHTT----------CSBCTTTCCBCCEEEECBCT
T ss_pred CEeEEeCcccCc----EEEECCCCHHHHHHHHHh----------cCcCCCCCchhhCeEEEEeC
Confidence 479999876542 222479999 89999862 36999999999998754443
No 24
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=94.30 E-value=0.0034 Score=41.28 Aligned_cols=71 Identities=21% Similarity=0.523 Sum_probs=47.1
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccccccccccccccccchHHHHHHH
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPVLSQNSTDSLLDVPVLEALQ 90 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp~~~q~stds~l~vpvlealq 90 (135)
..|.||+..|+- -.+|..|.|..|.+|..-.-... ...|.+||..+.. +.+....+++.+.
T Consensus 23 ~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~-----~~~CP~Cr~~~~~-----------~~l~~~~~~~~i~ 83 (100)
T 3lrq_A 23 FRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQ-----RAQCPHCRAPLQL-----------RELVNCRWAEEVT 83 (100)
T ss_dssp TBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHT-----CSBCTTTCCBCCG-----------GGCEECTTHHHHH
T ss_pred CCCccCCccccC---ccccCCCCChhhHHHHHHHHHHC-----cCCCCCCCCcCCH-----------HHhHhhHHHHHHH
Confidence 469999999973 45668999999999975221111 1689999988743 3455556666666
Q ss_pred hhcccccccc
Q psy15639 91 RRHSDVKIGS 100 (135)
Q Consensus 91 rrhsd~klg~ 100 (135)
......++++
T Consensus 84 ~~~~~l~~~~ 93 (100)
T 3lrq_A 84 QQLDTLQLCS 93 (100)
T ss_dssp HHHHHHCC--
T ss_pred HHHHHHHHHH
Confidence 6666666555
No 25
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=94.20 E-value=0.017 Score=35.88 Aligned_cols=55 Identities=20% Similarity=0.541 Sum_probs=42.8
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
...|.+|.+.+.++++---|..|..-.=..|...+.... +....|.|..|+.|.+
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~-~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARA-EHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGG-GGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHh-cCCCcEECCCCcCcCC
Confidence 346899999998888888899998776677888765432 3357899999998754
No 26
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.15 E-value=0.0087 Score=37.04 Aligned_cols=57 Identities=19% Similarity=0.538 Sum_probs=39.6
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.....|.||+..|..++..-+-..|.|..|.+|..-.-... ....+|.+||+.+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~---~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS---INGVRCPFCSKITRIT 69 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC---SSCBCCTTTCCCBCCS
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC---CCCcCCCCCCCcccch
Confidence 34567999999998776423333799999999975322111 2467999999876543
No 27
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.14 E-value=0.0045 Score=38.17 Aligned_cols=52 Identities=23% Similarity=0.514 Sum_probs=36.6
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
.....|.||+..|..++...+ ..|.|..|.+|..---. ....|.+||+.+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~-l~C~H~fh~~Ci~~w~~------~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRV-LPCNHEFHAKCVDKWLK------ANRTCPICRADSGP 72 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEE-ETTTEEEETTHHHHHHH------HCSSCTTTCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEE-ECCCCHhHHHHHHHHHH------cCCcCcCcCCcCCC
Confidence 345679999999988764443 34999999999753211 12479999977643
No 28
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.98 E-value=0.013 Score=35.89 Aligned_cols=53 Identities=21% Similarity=0.564 Sum_probs=36.9
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
+......|.||+..|+- ...+ .|.|..|.+|..-.-.. ..+|.+||..+....
T Consensus 11 ~~~~~~~C~IC~~~~~~--~~~~--~CgH~fC~~Ci~~~~~~------~~~CP~Cr~~~~~~~ 63 (71)
T 2d8t_A 11 PSLTVPECAICLQTCVH--PVSL--PCKHVFCYLCVKGASWL------GKRCALCRQEIPEDF 63 (71)
T ss_dssp SSSSCCBCSSSSSBCSS--EEEE--TTTEEEEHHHHHHCTTC------SSBCSSSCCBCCHHH
T ss_pred cCCCCCCCccCCcccCC--CEEc--cCCCHHHHHHHHHHHHC------CCcCcCcCchhCHhh
Confidence 34456789999998853 2222 69999999998532211 268999999887543
No 29
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.97 E-value=0.007 Score=37.93 Aligned_cols=45 Identities=18% Similarity=0.564 Sum_probs=34.1
Q ss_pred CCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
..|.||+..|+-- . =..|.|. .|.+|+. ....|.+||.++..++.
T Consensus 26 ~~C~IC~~~~~~~--~--~~pCgH~~~C~~C~~----------~~~~CP~Cr~~i~~~~~ 71 (75)
T 2ecg_A 26 KLCKICMDRNIAI--V--FVPCGHLVTCKQCAE----------AVDKCPMCYTVITFKQK 71 (75)
T ss_dssp HSCSSSCSSCCCB--C--CSSSCCCCBCHHHHH----------HCSBCTTTCCBCCCCCB
T ss_pred CCCCcCCCCCCCE--E--EecCCCHHHHHHHhh----------CCCCCccCCceecCcEE
Confidence 4699999887532 2 2479999 9999983 23789999999887654
No 30
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=93.90 E-value=0.0083 Score=37.73 Aligned_cols=46 Identities=20% Similarity=0.566 Sum_probs=35.1
Q ss_pred CCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhccccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQP 70 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp 70 (135)
..|.||+..|+- . +-..|.|. .|.+|+.-. ++|.+||..+..+++-
T Consensus 25 ~~C~iC~~~~~~--~--~~~pCgH~~~C~~C~~~~----------~~CP~Cr~~i~~~~~i 71 (74)
T 4ic3_A 25 KLCKICMDRNIA--I--VFVPCGHLVTCKQCAEAV----------DKCPMCYTVITFKQKI 71 (74)
T ss_dssp TBCTTTSSSBCC--E--EEETTCCBCCCHHHHTTC----------SBCTTTCCBCSEEEEC
T ss_pred CCCCCCCCCCCC--E--EEcCCCChhHHHHhhhcC----------ccCCCcCcCccCcEEE
Confidence 579999987653 2 22479999 999997633 8999999999887643
No 31
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.75 E-value=0.017 Score=37.33 Aligned_cols=51 Identities=20% Similarity=0.540 Sum_probs=35.7
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
-.|.||+..|+- ... ..|.|..|..|..-.-... ....+|.+||..+..+.
T Consensus 22 ~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~~~---~~~~~CP~Cr~~~~~~~ 72 (112)
T 1jm7_A 22 LECPICLELIKE--PVS--TKCDHIFCKFCMLKLLNQK---KGPSQCPLCKNDITKRS 72 (112)
T ss_dssp TSCSSSCCCCSS--CCB--CTTSCCCCSHHHHHHHHSS---SSSCCCTTTSCCCCTTT
T ss_pred CCCcccChhhcC--eEE--CCCCCHHHHHHHHHHHHhC---CCCCCCcCCCCcCCHhh
Confidence 479999998863 322 3799999999975332211 23578999998877654
No 32
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.68 E-value=0.054 Score=35.66 Aligned_cols=64 Identities=27% Similarity=0.662 Sum_probs=48.2
Q ss_pred CCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCC--------CCCCceeehhhhhhhhccc
Q psy15639 5 KPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDEN--------QDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~--------ed~~~WrCSvCRRK~~sr~ 68 (135)
.|..-...|.+|.+.|..-.-.|-|-.|.+-+|..|.++...-.. .....-.|..|-.+|..+.
T Consensus 9 ~pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~~~l~~~g~~~p~~~~~~~RVC~~C~~~l~~~~ 80 (84)
T 1x4u_A 9 YPTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFKVPKSSMGATAPEAQRETVFVCASCNQTLSKSG 80 (84)
T ss_dssp CSCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEEECSTTTSCCCSSCSSCCEEECHHHHHHHHSCC
T ss_pred ccCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhcCCceecccccccCccccCCccEECHHHHHHHhccC
Confidence 355667789999999988777899999999999999987533211 1234567999988876543
No 33
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=93.62 E-value=0.0036 Score=38.70 Aligned_cols=55 Identities=22% Similarity=0.392 Sum_probs=37.5
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
+....+.|.||+..++---+ +=.-|.|. .|.+|+.--+. ..++|.+||+++...+
T Consensus 3 ~~~~~~~C~IC~~~~~~~~~--~~~pCgH~~~C~~C~~~~~~------~~~~CPiCR~~i~~~i 58 (63)
T 2vje_B 3 CQNLLKPCSLCEKRPRDGNI--IHGRTGHLVTCFHCARRLKK------AGASCPICKKEIQLVI 58 (63)
T ss_dssp CGGGGSBCTTTSSSBSCEEE--EETTEEEEEECHHHHHHHHH------TTCBCTTTCCBCCEEE
T ss_pred CCCcCCCCcccCCcCCCeEE--EecCCCCHhHHHHHHHHHHH------hCCcCCCcCchhhceE
Confidence 34456789999986542221 11278998 79999874331 2379999999987655
No 34
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=93.55 E-value=0.004 Score=38.64 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=38.0
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
|......|.||+..++---+- --.|.|. .|.+|+.--.. ..++|.+||+++...++
T Consensus 4 ~~~~~~~C~IC~~~~~~~~~~--~~pCgH~~~C~~C~~~~~~------~~~~CPiCR~~i~~~i~ 60 (64)
T 2vje_A 4 PLNAIEPCVICQGRPKNGCIV--HGKTGHLMACFTCAKKLKK------RNKPCPVCRQPIQMIVL 60 (64)
T ss_dssp -CGGGSCCTTTSSSCSCEEEE--ETTEEEEEECHHHHHHHHH------TTCCCTTTCCCCCEEEE
T ss_pred CCCCcCCCCcCCCCCCCEEEE--CCCCCChhhHHHHHHHHHH------cCCcCCCcCcchhceEe
Confidence 445667899999876532111 1269999 69999874432 34789999999876553
No 35
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=93.38 E-value=0.024 Score=36.95 Aligned_cols=54 Identities=22% Similarity=0.587 Sum_probs=39.1
Q ss_pred CCCCchhhccccCCCCcc-chhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPDDYS-RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~-~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
....|.||+--|.-.+.. ..| .|.|..|-.|..-.... ...+|.+||+.+..+.
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~-----~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD-----ENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS-----SCSBCTTTCCBCSSCS
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc-----CCCCCCCCCCccCCCc
Confidence 446899999988654433 334 79999999997544321 4579999999988765
No 36
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=93.03 E-value=0.023 Score=36.67 Aligned_cols=55 Identities=22% Similarity=0.440 Sum_probs=42.6
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCC-CCCC-CCCceeehhhhhhhh
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKL-DENQ-DENTWRCSICRRKLQ 65 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl-~~~e-d~~~WrCSvCRRK~~ 65 (135)
..|.+|.+.|..-.-.|-|--|.+.||.+|.++... +... ....--|..|-.++.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~~~~lp~~~~~~~~RVC~~C~~~l~ 68 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSSNSIPLPDLGIYEPVRVCDSCFEDYE 68 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSCEEEEEGGGTEEEEEEECHHHHHHHH
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccCCeEEcccCCCCCCCEECHHHHHHHH
Confidence 589999999998888899999999999999987532 2211 234577888877664
No 37
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=92.94 E-value=0.027 Score=39.03 Aligned_cols=57 Identities=16% Similarity=0.553 Sum_probs=43.6
Q ss_pred CCCchhhccccCCCCccchhh-hhhhhhhcccccccCCCC----CCCCCceeehhhhhhhhc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCY-ECHQKVCEDCASYSKLDE----NQDENTWRCSICRRKLQS 66 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~-eCqqkVCEDCASYSkl~~----~ed~~~WrCSvCRRK~~s 66 (135)
.-.|.+|+|.+.+++..-.|+ .|+.-.=-+|...+...- .+....|.|..|+++...
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~~ 64 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKEG 64 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCCC
Confidence 457999999999988888998 898777778888775221 022378999999987653
No 38
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.28 E-value=0.024 Score=34.07 Aligned_cols=52 Identities=17% Similarity=0.457 Sum_probs=37.1
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
....-.|.||+..|+- ... ..|.|..|..|..-.-. .....|.+||..+..+
T Consensus 12 ~~~~~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCS--PKQ--TECGHRFCESCMAALLS-----SSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCCEECTTTCCEESS--CCC--CSSSCCCCHHHHHHHHT-----TSSCCCTTTCCCCCTT
T ss_pred CCcCCCCCCCChHhcC--eeE--CCCCCHHHHHHHHHHHH-----hCcCCCCCCCcCCChh
Confidence 3445679999999863 222 38999999999754321 2356799999987654
No 39
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=92.17 E-value=0.017 Score=34.47 Aligned_cols=53 Identities=17% Similarity=0.432 Sum_probs=36.9
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccccc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQP 70 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp 70 (135)
....|.||+..|+..- +-..|.|..|.+|..-.-. ....|.+||..+.+....
T Consensus 4 ~~~~C~IC~~~~~~~~---~~~~C~H~fc~~Ci~~~~~------~~~~CP~Cr~~~~~~~~~ 56 (68)
T 1chc_A 4 VAERCPICLEDPSNYS---MALPCLHAFCYVCITRWIR------QNPTCPLCKVPVESVVHT 56 (68)
T ss_dssp CCCCCSSCCSCCCSCE---EETTTTEEESTTHHHHHHH------HSCSTTTTCCCCCCEECC
T ss_pred CCCCCeeCCccccCCc---EecCCCCeeHHHHHHHHHh------CcCcCcCCChhhHhhhhc
Confidence 3568999999986322 3446999999999843211 124899999998765543
No 40
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=92.03 E-value=0.028 Score=43.90 Aligned_cols=59 Identities=20% Similarity=0.380 Sum_probs=0.0
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCC-CCCCceeehhhhhhhhc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDEN-QDENTWRCSICRRKLQS 66 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~-ed~~~WrCSvCRRK~~s 66 (135)
.-...|.+|.+.|..---.|.|-.|.+-||..|.++.-.-.. .....=-|..|-.++..
T Consensus 373 ~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l~~ 432 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKK 432 (434)
T ss_dssp ------------------------------------------------------------
T ss_pred ccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHHHh
Confidence 345689999999987666799999999999999987543221 12233457777766643
No 41
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=91.97 E-value=0.039 Score=32.94 Aligned_cols=45 Identities=20% Similarity=0.496 Sum_probs=33.6
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.-.|.||+..|+- . +--.|.|..|..|..- ....|.+||..+...
T Consensus 6 ~~~C~IC~~~~~~--p--~~l~CgH~fC~~Ci~~---------~~~~CP~Cr~~~~~~ 50 (56)
T 1bor_A 6 FLRCQQCQAEAKC--P--KLLPCLHTLCSGCLEA---------SGMQCPICQAPWPLG 50 (56)
T ss_dssp CSSCSSSCSSCBC--C--SCSTTSCCSBTTTCSS---------SSSSCSSCCSSSSCC
T ss_pred CCCceEeCCccCC--e--EEcCCCCcccHHHHcc---------CCCCCCcCCcEeecC
Confidence 4579999998873 2 2246999999999754 345799999877543
No 42
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=91.73 E-value=0.028 Score=40.05 Aligned_cols=55 Identities=13% Similarity=0.359 Sum_probs=41.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
...| +|++....+++---|..|..-.=..|...+... .+....|.|..|+++-..
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~-~~~~~~~~C~~C~~~~~~ 62 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSE-AELIDEYVCPQCQSTEDA 62 (174)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHH-HTTCSSCCCHHHHHHHHH
T ss_pred CcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhh-ccCccCeecCCCcchhcc
Confidence 3469 999988878888889999877777888765432 234678999999987543
No 43
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=91.58 E-value=0.011 Score=40.81 Aligned_cols=48 Identities=23% Similarity=0.640 Sum_probs=34.3
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
.|.||+.-|. ++.. ..|.|..|.+|..-.-. ..-.|.+||..+.++..
T Consensus 55 ~C~iC~~~~~--~~~~--~~CgH~fc~~Ci~~~~~------~~~~CP~Cr~~~~~~~~ 102 (138)
T 4ayc_A 55 QCIICSEYFI--EAVT--LNCAHSFCSYCINEWMK------RKIECPICRKDIKSKTY 102 (138)
T ss_dssp BCTTTCSBCS--SEEE--ETTSCEEEHHHHHHHTT------TCSBCTTTCCBCCCEEE
T ss_pred CCcccCcccC--CceE--CCCCCCccHHHHHHHHH------cCCcCCCCCCcCCCCCC
Confidence 5999999885 3332 36999999999752211 23469999998877653
No 44
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.15 E-value=0.025 Score=35.18 Aligned_cols=48 Identities=27% Similarity=0.488 Sum_probs=34.6
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
...-.|.||+..|.- ... ..|.|..|..|..-.-. ...+|.+||..+.
T Consensus 13 ~~~~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~------~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQN--PVV--TKCRHYFCESCALEHFR------ATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCS--EEE--CTTSCEEEHHHHHHHHH------HCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcC--eeE--ccCCCHhHHHHHHHHHH------CCCcCCCcCcccc
Confidence 345679999999853 322 47999999999743321 1458999999886
No 45
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.95 E-value=0.009 Score=35.31 Aligned_cols=56 Identities=21% Similarity=0.522 Sum_probs=36.9
Q ss_pred CCCCCCCchhhccccCCCC---ccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 6 PAARLGNCRVCLKSFKPDD---YSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e---~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.......|.||+..|+... -..+-..|.|..|.+|..---.. .-+|.+||..+..|
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~------~~~CP~Cr~~~~~r 69 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN------ANTCPTCRKKINHK 69 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH------CSSCTTTCCCCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc------CCCCCCCCCccCcC
Confidence 3445678999999886431 11134579999999997422111 23799999887653
No 46
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=90.92 E-value=0.024 Score=37.97 Aligned_cols=48 Identities=25% Similarity=0.535 Sum_probs=34.9
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..|.||+.-|. +...+ .|.|..|.+|..-.-. .....|.+||..+..+
T Consensus 53 ~~C~IC~~~~~--~p~~~--~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~ 100 (124)
T 3fl2_A 53 FQCICCQELVF--RPITT--VCQHNVCKDCLDRSFR-----AQVFSCPACRYDLGRS 100 (124)
T ss_dssp TBCTTTSSBCS--SEEEC--TTSCEEEHHHHHHHHH-----TTCCBCTTTCCBCCTT
T ss_pred CCCCcCChHHc--CcEEe--eCCCcccHHHHHHHHh-----HCcCCCCCCCccCCCC
Confidence 46999999987 33333 8999999999742211 2345899999988763
No 47
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=90.88 E-value=0.074 Score=34.52 Aligned_cols=60 Identities=15% Similarity=0.394 Sum_probs=44.3
Q ss_pred CCCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 4 DKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 4 ~kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
-.+....-.| ||++...++++---|..|+.-.=.+|..++..+. ++...|.|..|+++..
T Consensus 6 ~~~~~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~-~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 6 SGMALVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENA-VDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCCCCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHH-TTCSBBCCTTTTTTSC
T ss_pred cCccCCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccc-cCCCeEECCCcccccC
Confidence 3455666778 9999988888888899997666667777765332 3357899999998654
No 48
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=90.71 E-value=0.1 Score=33.11 Aligned_cols=54 Identities=20% Similarity=0.389 Sum_probs=37.5
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..|.||++.-. +++--.|+.|..-.=-.|...+.... ....|.|..|..++..+
T Consensus 19 ~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~--~~~~w~C~~C~~~~~k~ 72 (75)
T 2k16_A 19 WICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPP--EEMQWFCPKCANKIKKD 72 (75)
T ss_dssp ECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCC--SSSCCCCTTTHHHHCSC
T ss_pred cCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCC--CCCCEEChhccCchhhc
Confidence 45999998764 55677788887554455666654432 23689999999988654
No 49
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=90.60 E-value=0.05 Score=41.26 Aligned_cols=58 Identities=21% Similarity=0.460 Sum_probs=44.5
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCC--CCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDEN--QDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~--ed~~~WrCSvCRRK~~sr 67 (135)
...|.+|.+.|..---.|-|--|.+-||..|.++...-.. .....--|..|-.++..+
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~~~~p~~~~~~~~RVC~~C~~~l~~~ 223 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRK 223 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEEEEEGGGTEEEEEEECHHHHHHHCC-
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCCcccCCCCCCCCCCEeCHHHHHHhhhh
Confidence 4689999999998777899999999999999998543221 123466789998877654
No 50
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=90.11 E-value=0.061 Score=43.73 Aligned_cols=46 Identities=26% Similarity=0.689 Sum_probs=35.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhh-hhcccccccCCCCCCCCCceeehhhhhhhhcccc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQK-VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQ 69 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqk-VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~q 69 (135)
...|.||+-.|+ +.. -.-|.|. .|..|+.-- +.|.+||..+..+++
T Consensus 295 ~~~C~IC~~~~~--~~v--~lpCgH~~fC~~C~~~~----------~~CP~CR~~i~~~~~ 341 (345)
T 3t6p_A 295 ERTCKVCMDKEV--SVV--FIPCGHLVVCQECAPSL----------RKCPICRGIIKGTVR 341 (345)
T ss_dssp TCBCTTTSSSBC--CEE--EETTCCEEECTTTGGGC----------SBCTTTCCBCCEEEE
T ss_pred CCCCCccCCcCC--ceE--EcCCCChhHhHHHHhcC----------CcCCCCCCCccCeEE
Confidence 357999998875 222 2379999 999998732 799999999887764
No 51
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=89.92 E-value=0.15 Score=36.69 Aligned_cols=55 Identities=22% Similarity=0.577 Sum_probs=40.0
Q ss_pred CCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 5 KPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
.|..-+..|..|.+.|..---.|.|-.|.+.+|..|.++... ..-.|..|-..+.
T Consensus 14 ~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~------~vRVC~~C~~~~~ 68 (120)
T 1y02_A 14 SPTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGN------GPRLCLLCQRFRA 68 (120)
T ss_dssp ------CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----------CCEEHHHHHHHH
T ss_pred cCccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCC------CceECHHHHHHHh
Confidence 366777899999999987777799999999999999998754 2677999987653
No 52
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=89.69 E-value=0.081 Score=39.39 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=42.9
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCC-CCC-CCCCceeehhhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKL-DEN-QDENTWRCSICRRKLQ 65 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl-~~~-ed~~~WrCSvCRRK~~ 65 (135)
...|.+|.+.|..-.-.|-|--|.+-||.+|.++... +.. .....--|..|-.+++
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~~~~~~~~~~~~~RvC~~C~~~l~ 218 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYGIEKEVRVCDGCFAALQ 218 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEEEEEGGGTEEEEEEECHHHHHHHH
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCCeeecCcCCCCCCCEeCHHHHHHHh
Confidence 4689999999998777899999999999999997532 211 1234567888877665
No 53
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=89.15 E-value=0.036 Score=38.79 Aligned_cols=48 Identities=31% Similarity=0.720 Sum_probs=35.4
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.|.||+..|.- ..+...|.|..|..|..-.-. .....|.+||..+.++
T Consensus 56 ~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~ 103 (165)
T 2ckl_B 56 MCPICLDMLKN---TMTTKECLHRFCADCIITALR-----SGNKECPTCRKKLVSK 103 (165)
T ss_dssp BCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHH-----TTCCBCTTTCCBCCSG
T ss_pred CCcccChHhhC---cCEeCCCCChhHHHHHHHHHH-----hCcCCCCCCCCcCCCc
Confidence 79999999874 344568999999999754322 1246799999988654
No 54
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.53 E-value=0.049 Score=34.66 Aligned_cols=52 Identities=21% Similarity=0.463 Sum_probs=34.1
Q ss_pred CCCchhhccccCC-----------CCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKP-----------DDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP-----------~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...|-||+..|.. ++.-.+-..|.|..+.+|..---..+ -+|.+||+.+..+
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~------~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN------NRCPLCQQDWVVQ 77 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC------CBCTTTCCBCCEE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC------CCCCCcCCCcchh
Confidence 4568888888853 34333444699999999975322211 2899999876543
No 55
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=88.48 E-value=0.027 Score=33.72 Aligned_cols=53 Identities=17% Similarity=0.501 Sum_probs=34.4
Q ss_pred CCchhhcc-ccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 11 GNCRVCLK-SFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 11 g~CRVClK-sfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
..|.||+. .|.-......=..|.|..|..|..-... ....+|.+||+.+..+.
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-----RGAGNCPECGTPLRKSN 57 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-----TTSSSCTTTCCCCSSCC
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-----cCCCcCCCCCCcccccc
Confidence 46999998 5543321111147999999999753311 12468999999987654
No 56
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=88.47 E-value=0.33 Score=29.92 Aligned_cols=51 Identities=24% Similarity=0.602 Sum_probs=35.6
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
...|.||.++ + ---.|+.|..-.=-.|.. ....+ ...|.|..|..++..+.
T Consensus 5 ~~~C~vC~~~---g-~ll~Cd~C~~~fH~~Cl~ppl~~~p----~g~W~C~~C~~~~~~~~ 57 (60)
T 2puy_A 5 EDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIP----KGMWICPRCQDQMLKKE 57 (60)
T ss_dssp CSSCTTTCCC---S-SCEECSSSSCEECGGGSSSCCSSCC----CSCCCCHHHHHHHHHTT
T ss_pred CCCCcCCCCC---C-cEEEcCCCCcCEECCcCCCCcCCCC----CCceEChhccChhhchh
Confidence 4579999984 4 356688887666566665 33322 35899999999887665
No 57
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=88.30 E-value=0.0092 Score=45.29 Aligned_cols=55 Identities=24% Similarity=0.577 Sum_probs=39.4
Q ss_pred CCchhhccccCCCCc---cchhhhhhhhhhcccccccCC-----CCCCCCCceeehhhhhhhh
Q psy15639 11 GNCRVCLKSFKPDDY---SRVCYECHQKVCEDCASYSKL-----DENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 11 g~CRVClKsfkP~e~---~~tC~eCqqkVCEDCASYSkl-----~~~ed~~~WrCSvCRRK~~ 65 (135)
..|.||.|.+.++|+ ---|+.|+.-+=-.|...+.. .+..+...|.|..|+++-.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 469999999999997 667999997776667665531 0000124899999988743
No 58
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.82 E-value=0.042 Score=33.59 Aligned_cols=51 Identities=18% Similarity=0.405 Sum_probs=35.6
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
....|.||+..|+- -.+-..|.|..|..|..-.-.. .-+|.+||..+..+.
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~------~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 14 PYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY------SNRCPKCNIVVHQTQ 64 (72)
T ss_dssp GGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH------CSSCTTTCCCCCSSC
T ss_pred CCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc------CCcCCCcCcccCccc
Confidence 35679999998874 1223479999999997432211 357999999887654
No 59
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=87.81 E-value=0.29 Score=31.15 Aligned_cols=52 Identities=15% Similarity=0.265 Sum_probs=38.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
.-.| ||++....+++---|..|..-.=-.|..++.... ....|.|..|+++.
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~--~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA--LPSKFLCFRCIELS 67 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC--CCSCCCCHHHHHHC
T ss_pred ceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc--CCCcEECCCccCCC
Confidence 4468 8998876777888888886555557888876432 35789999998764
No 60
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=87.68 E-value=0.034 Score=35.78 Aligned_cols=48 Identities=17% Similarity=0.422 Sum_probs=34.2
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..|.||+..|+- . .+...|.|..|..|..-.-.. .-+|.+||..+...
T Consensus 23 ~~C~IC~~~~~~--p-~~~~~CgH~fC~~Ci~~~~~~------~~~CP~Cr~~~~~~ 70 (99)
T 2y43_A 23 LRCGICFEYFNI--A-MIIPQCSHNYCSLCIRKFLSY------KTQCPTCCVTVTEP 70 (99)
T ss_dssp TBCTTTCSBCSS--E-EECTTTCCEEEHHHHHHHHTT------CCBCTTTCCBCCGG
T ss_pred CCcccCChhhCC--c-CEECCCCCHhhHHHHHHHHHC------CCCCCCCCCcCChh
Confidence 579999999873 2 233579999999997432221 24899999887653
No 61
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.30 E-value=0.19 Score=28.37 Aligned_cols=37 Identities=24% Similarity=0.341 Sum_probs=25.2
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
+.-.|.+|.|+|.-...... ...+.|.+|++....+.
T Consensus 17 ~~~~C~~C~k~f~~~~~l~~-----------------------~~~~~C~~C~~~f~~~~ 53 (73)
T 2ctu_A 17 RSQKCSKCGIIFIRRSTLSR-----------------------RKTPMCEKCRKDSCQEA 53 (73)
T ss_dssp SEEECSSSCCEEECCCCCCC-----------------------SSSCCCHHHHHTCSCCC
T ss_pred CCeeCCcccchhCCHHHhCc-----------------------CCCCCCCCCChhhcCHH
Confidence 45678888888875544333 45688899988765544
No 62
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=86.27 E-value=0.029 Score=32.59 Aligned_cols=53 Identities=25% Similarity=0.605 Sum_probs=35.7
Q ss_pred CCCchhhccccCCC---CccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 10 LGNCRVCLKSFKPD---DYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 10 ~g~CRVClKsfkP~---e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
...|.||+..|+.. +-..+-..|.|..|.+|..-.-. ...+|.+||..+..+.
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~------~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK------NANTCPTCRKKINHKR 58 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHH------HCSBCTTTCCBCTTTC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHH------cCCCCCCCCccCCccc
Confidence 45799999988642 11224457999999999742211 1348999999877643
No 63
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.39 E-value=0.15 Score=33.41 Aligned_cols=57 Identities=16% Similarity=0.317 Sum_probs=36.9
Q ss_pred CCCCCchhhccccCCCCccchhhhh---hhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYEC---HQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eC---qqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.-...|+||+-.|..++.-..=+.| .|.+-.+|..--- .. .+..+|.+||..+.-..
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl-~~---~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWI-KS---SDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHH-HH---HCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHH-hh---CCCCCCCCCCCeeecCc
Confidence 3457899999999887764321122 4888888864221 11 12468999999876443
No 64
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=84.88 E-value=0.2 Score=30.94 Aligned_cols=57 Identities=19% Similarity=0.595 Sum_probs=37.7
Q ss_pred CCCchhhccccC-CCCccchhhhhhhhhhcccccccCCCCC--CCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFK-PDDYSRVCYECHQKVCEDCASYSKLDEN--QDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfk-P~e~~~tC~eCqqkVCEDCASYSkl~~~--ed~~~WrCSvCRRK~~sr 67 (135)
...|.||.+.+. .++.--.|..|..-+=-.|-.-. ++.. .....|.|..|..+.+.|
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~-l~~~~~~p~~~W~C~~C~~~~~~k 65 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPH-IDSSVIDSDEKWLCRQCVFATTTK 65 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSC-CCHHHHHSSCCCCCHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCc-ccccccCCCCCEECCCCcCccccC
Confidence 467999998863 45666778888766555555432 2211 134689999999877654
No 65
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=84.77 E-value=0.37 Score=32.66 Aligned_cols=47 Identities=21% Similarity=0.562 Sum_probs=32.2
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
.| ||++.... .+--.|..|..-.=-.|..+... +.+..|.|..|+.+
T Consensus 30 rC-iC~~~~~~-~~mi~Cd~C~~w~H~~C~~~~~~---~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 30 RC-ICGFTHDD-GYMICCDKCSVWQHIDCMGIDRQ---HIPDTYLCERCQPR 76 (98)
T ss_dssp CC-TTSCCSCS-SCEEEBTTTCBEEETTTTTCCTT---SCCSSBCCTTTSSS
T ss_pred Ee-ECCCccCC-CcEEEcCCCCCcCcCcCCCCCcc---CCCCCEECCCCcCC
Confidence 48 89887654 45566888876666677776433 23457999999743
No 66
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=84.21 E-value=0.038 Score=32.94 Aligned_cols=55 Identities=22% Similarity=0.547 Sum_probs=36.9
Q ss_pred CCCCCCchhhccccCCC---CccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 7 AARLGNCRVCLKSFKPD---DYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~---e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..-...|.||+..|... +-..+-..|.|..|.+|..-.-. . .-+|.+||..+...
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-~-----~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-N-----ANTCPTCRKKINHK 64 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHH-H-----CSBCTTTCCBCCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHH-c-----CCCCCCCCCccChh
Confidence 34456799999988542 22224568999999999842211 1 13899999887654
No 67
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=84.15 E-value=0.084 Score=34.45 Aligned_cols=56 Identities=11% Similarity=0.324 Sum_probs=36.4
Q ss_pred CCchhhccccCCCCc--------------cchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDY--------------SRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~--------------~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..|-||+..|...+. ...-..|.|..|.+|..--- .+......-.|.+||+.+..+
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl-~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMY-CNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHH-HHTCCSSCCBCTTTCCBSSSC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHH-HcccCCCCCcCCCCCCccCCC
Confidence 589999999965431 11145699999999965221 111112345899999887655
No 68
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=84.06 E-value=0.72 Score=29.70 Aligned_cols=49 Identities=31% Similarity=0.650 Sum_probs=37.5
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhh
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRR 62 (135)
....| ||++... +++---|..|+.-.=..|...+... -...|.|+.|++
T Consensus 18 ~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~---~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSN---VPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTS---CCSSCCCHHHHT
T ss_pred CceEe-ECCCcCC-CCCEEECCCCCccccccccCcCccc---CCCcEECCCCCC
Confidence 45578 9998765 7788889998877667788877642 356999999975
No 69
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=83.84 E-value=0.5 Score=32.25 Aligned_cols=48 Identities=25% Similarity=0.717 Sum_probs=26.6
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccc--cccCCCCCCCCCceeehhhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCA--SYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCA--SYSkl~~~ed~~~WrCSvCRRK 63 (135)
.|.||++.-..++..-.|+.|....=-.|. .+.+.++ ..|.|..|+.|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~----~~W~C~~C~~k 112 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPK----GMWICQICRPR 112 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCS----SCCCCTTTSCC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCC----CCeECCCCCCc
Confidence 466666543333445556666555545554 2333332 37999998764
No 70
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=83.83 E-value=0.036 Score=37.07 Aligned_cols=49 Identities=20% Similarity=0.499 Sum_probs=33.7
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
....|.||+..|+. ... ..|.|..|.+|..-.-... ..+|.+||..+..
T Consensus 17 ~~~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~~~-----~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALRE--AVQ--TPCGHRFCKACIIKSIRDA-----GHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSS--EEE--CTTSCEEEHHHHHHHHHHH-----CSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcC--eEE--CCcCChhhHHHHHHHHhhC-----CCCCCCCCCCcCH
Confidence 34589999999863 222 2799999999975322111 1289999977654
No 71
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=83.70 E-value=0.19 Score=30.72 Aligned_cols=51 Identities=16% Similarity=0.100 Sum_probs=36.2
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...-.|.||+.-|+ +...+ .|.|..|..|..-.-. ....+|.+||..+...
T Consensus 6 ~~~~~C~IC~~~~~--~Pv~~--~CgH~fc~~Ci~~~~~-----~~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 6 PEYFRCPISLELMK--DPVIV--STGQTYERSSIQKWLD-----AGHKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSSCTTTSCCCS--SEEEE--TTTEEEEHHHHHHHHT-----TTCCBCTTTCCBCSSC
T ss_pred cccCCCCCcccccc--CCEEc--CCCCeecHHHHHHHHH-----HCcCCCCCCcCCCChh
Confidence 44678999999886 33333 7999999999743221 1256899999887654
No 72
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=82.85 E-value=0.31 Score=32.37 Aligned_cols=45 Identities=18% Similarity=0.391 Sum_probs=32.4
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
-.|.||+..|+- ...+ ..|.|..|..|..-.-. ..|.+||..+..
T Consensus 23 ~~C~IC~~~~~~--pv~~-~~CgH~fC~~Ci~~~~~--------~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 23 LRCSRCTNILRE--PVCL-GGCEHIFCSNCVSDCIG--------TGCPVCYTPAWI 67 (117)
T ss_dssp TSCSSSCSCCSS--CBCC-CSSSCCBCTTTGGGGTT--------TBCSSSCCBCSC
T ss_pred CCCCCCChHhhC--ccEe-CCCCCHHHHHHHHHHhc--------CCCcCCCCcCcc
Confidence 479999999852 2222 26999999999853321 579999998743
No 73
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=82.71 E-value=0.47 Score=30.49 Aligned_cols=56 Identities=16% Similarity=0.455 Sum_probs=41.0
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.-.| ||++.+.++++---|..|+.-.=.+|...+..+. ++...|.|..|+++....
T Consensus 10 ~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~-~~~~~~~C~~C~~~~~~~ 65 (75)
T 3kqi_A 10 PVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEA-PDIDIYHCPNCEKTHGKS 65 (75)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTG-GGBSSCCCHHHHHHHCCC
T ss_pred eeEE-ECCCcCCCCCCEEEcCCCCCCEeccccccccccc-CCCCEEECCCCcccCCCC
Confidence 3445 8999888888888899988766667777765432 234689999999886543
No 74
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=82.38 E-value=0.3 Score=29.81 Aligned_cols=16 Identities=19% Similarity=0.470 Sum_probs=12.2
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..+.-.|.+|.|.|.-
T Consensus 14 ~~~~~~C~~C~~~f~~ 29 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTK 29 (106)
T ss_dssp CCCCCBCSSSCCBCSS
T ss_pred CCcCeECCCCCCccCC
Confidence 3455689999999964
No 75
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=82.25 E-value=0.56 Score=30.39 Aligned_cols=55 Identities=24% Similarity=0.413 Sum_probs=37.8
Q ss_pred CCCCchhhccccCCCCccchhh--hhhhhhhcccccccCCCCC---CCCCceeehhhhhhhh
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCY--ECHQKVCEDCASYSKLDEN---QDENTWRCSICRRKLQ 65 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~--eCqqkVCEDCASYSkl~~~---ed~~~WrCSvCRRK~~ 65 (135)
-.-.| ||++.. .+.+---|. .|+.-.=-.|..++..... +....|.|..|+++.+
T Consensus 15 ~~~~C-iC~~~~-~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 15 IKVRC-VCGNSL-ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCCC-SSCCCC-CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCEEe-ECCCcC-CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccC
Confidence 34568 899873 455666677 6755444568888776532 4568999999998754
No 76
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=82.17 E-value=0.15 Score=33.24 Aligned_cols=49 Identities=20% Similarity=0.416 Sum_probs=34.8
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.-.|.||+..|+- . .+...|.|..|..|..-.-.. .-.|.+||..+...
T Consensus 15 ~~~C~IC~~~~~~--p-~~~~~CgH~fC~~Ci~~~~~~------~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 15 HLMCVLCGGYFID--A-TTIIECLHSFCKTCIVRYLET------SKYCPICDVQVHKT 63 (108)
T ss_dssp GTBCTTTSSBCSS--E-EEETTTCCEEEHHHHHHHHTS------CSBCTTTCCBSCSS
T ss_pred cCCCccCChHHhC--c-CEeCCCCChhhHHHHHHHHHh------CCcCcCCCcccccc
Confidence 4579999999863 2 333589999999997432111 25899999988764
No 77
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=80.61 E-value=0.49 Score=29.47 Aligned_cols=14 Identities=29% Similarity=0.857 Sum_probs=10.6
Q ss_pred CCCCceeehhhhhh
Q psy15639 50 QDENTWRCSICRRK 63 (135)
Q Consensus 50 ed~~~WrCSvCRRK 63 (135)
+-+..|+|.+|+-.
T Consensus 26 ~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 26 QLPDDWCCPVCGVS 39 (46)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred hCCCCCcCcCCCCc
Confidence 44667999999853
No 78
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=80.59 E-value=0.78 Score=29.91 Aligned_cols=52 Identities=19% Similarity=0.548 Sum_probs=37.6
Q ss_pred CCCCchhhcccc-CCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 9 RLGNCRVCLKSF-KPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 9 r~g~CRVClKsf-kP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
-...|.||.+.- ..++.--.|+.|..-+=-.|......+ ...|.|..|..+.
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP----~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIP----EGQWLCRHCLQSR 67 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCC----SSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCC----CCCcCCccCcCcC
Confidence 356799999874 455566788888877767776665433 3589999998754
No 79
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=78.96 E-value=0.062 Score=34.57 Aligned_cols=77 Identities=17% Similarity=0.469 Sum_probs=46.3
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhccccc-ccCCCCCC-CCCceeehh--hhhhhhccccccccccccccccchH
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS-YSKLDENQ-DENTWRCSI--CRRKLQSRAQPVLSQNSTDSLLDVP 84 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS-YSkl~~~e-d~~~WrCSv--CRRK~~sr~qp~~~q~stds~l~vp 84 (135)
..-.|.||+-.|+..++.. -..|.|..|.+|.. |-+..-.+ .....+|.. |+... .++++.-..+|.--
T Consensus 4 ~~~~C~IC~~~~~~~~~~~-l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~------~~~~~~i~~ll~~~ 76 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTT-IAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQG------HLQENEIECMVAAE 76 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEE-ETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCC------EECHHHHHHHSCHH
T ss_pred CCcCCcccCcccccccceE-cCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCC------ccCHHHHHHHCCHH
Confidence 3457999999887665543 24699999999964 32221111 124689999 98761 13333334555555
Q ss_pred HHHHHHhh
Q psy15639 85 VLEALQRR 92 (135)
Q Consensus 85 vlealqrr 92 (135)
++|.+++.
T Consensus 77 ~~~ky~~~ 84 (94)
T 1wim_A 77 IMQRYKKL 84 (94)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655553
No 80
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=78.96 E-value=1.1 Score=28.20 Aligned_cols=52 Identities=25% Similarity=0.604 Sum_probs=33.4
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
-...|.||.++ ++ --.|+.|..-.=-.|.. .... ....|.|..|..+...|.
T Consensus 7 ~~~~C~vC~~~---g~-ll~CD~C~~~fH~~Cl~ppl~~~----P~g~W~C~~C~~~~~~~~ 60 (66)
T 1xwh_A 7 NEDECAVCRDG---GE-LICCDGCPRAFHLACLSPPLREI----PSGTWRCSSCLQATVQEV 60 (66)
T ss_dssp CCCSBSSSSCC---SS-CEECSSCCCEECTTTSSSCCSSC----CSSCCCCHHHHHTCCCCC
T ss_pred CCCCCccCCCC---CC-EEEcCCCChhhcccccCCCcCcC----CCCCeECccccCcccccC
Confidence 45679999974 43 45677776544445554 2222 236899999998766655
No 81
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=78.42 E-value=0.2 Score=30.42 Aligned_cols=48 Identities=17% Similarity=0.326 Sum_probs=35.8
Q ss_pred CchhhccccCCCCccchhh-hhhhhhhcccccccCCCCCCCCCceeehhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCY-ECHQKVCEDCASYSKLDENQDENTWRCSICR 61 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~-eCqqkVCEDCASYSkl~~~ed~~~WrCSvCR 61 (135)
+|-+|++...++++--.|. .|+.-.=..|...+..... ...|.|..|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~--~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAE--NEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHH--HSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccC--CCCEECCCCC
Confidence 5889999998888888888 7886666678877654321 2679999885
No 82
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=78.24 E-value=0.14 Score=33.11 Aligned_cols=54 Identities=22% Similarity=0.553 Sum_probs=36.5
Q ss_pred CCCCchhhccccCCC---CccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPD---DYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~---e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
....|.||+..|+-. +-..+-..|.|..|.+|..-.-.. .-.|.+||+.+..+.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~------~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN------ANTCPTCRKKINHKR 62 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTT------CSBCTTTCCBCTTTC
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHh------CCCCCCCCCcCcccc
Confidence 346799999988632 111244579999999998533211 128999999887655
No 83
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=78.18 E-value=0.18 Score=35.74 Aligned_cols=48 Identities=27% Similarity=0.570 Sum_probs=34.5
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..|.||+.-|.- ... ..|.|..|..|..-.-. ....+|.+||..+..+
T Consensus 79 ~~C~IC~~~~~~--pv~--~~CgH~fC~~Ci~~~~~-----~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 79 FMCVCCQELVYQ--PVT--TECFHNVCKDCLQRSFK-----AQVFSCPACRHDLGQN 126 (150)
T ss_dssp TBCTTTSSBCSS--EEE--CTTSCEEEHHHHHHHHH-----TTCCBCTTTCCBCCTT
T ss_pred CEeecCChhhcC--CEE--cCCCCchhHHHHHHHHH-----hCCCcCCCCCccCCCC
Confidence 469999998863 333 48999999999743221 1345899999988765
No 84
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=77.86 E-value=0.33 Score=29.83 Aligned_cols=54 Identities=19% Similarity=0.417 Sum_probs=35.3
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
......|.||+..|+- .. +-..|.|..|..|..-.-.. ....+|.+||..+...
T Consensus 12 ~~~~~~C~IC~~~~~~--p~-~~~~CgH~fC~~Ci~~~~~~----~~~~~CP~Cr~~~~~~ 65 (74)
T 2yur_A 12 IPDELLCLICKDIMTD--AV-VIPCCGNSYCDECIRTALLE----SDEHTCPTCHQNDVSP 65 (74)
T ss_dssp SCGGGSCSSSCCCCTT--CE-ECSSSCCEECTTHHHHHHHH----SSSSCCSSSCCSSCCT
T ss_pred CCCCCCCcCCChHHhC--Ce-EcCCCCCHHHHHHHHHHHHh----cCCCcCCCCCCcCCCc
Confidence 3445689999999873 22 22349999999997432211 1246899999865433
No 85
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=77.42 E-value=0.36 Score=30.82 Aligned_cols=55 Identities=16% Similarity=0.462 Sum_probs=37.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCC---CCCCceeehhhhhhhhc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDEN---QDENTWRCSICRRKLQS 66 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~---ed~~~WrCSvCRRK~~s 66 (135)
.-.| ||++... +++---|..|+.-.=.+|..++..... +....|.|..|+.+...
T Consensus 16 ~~~C-~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 16 ALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCEE-ECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 4568 8998765 567777888876655667776643210 12568999999987644
No 86
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=76.02 E-value=0.32 Score=31.30 Aligned_cols=51 Identities=18% Similarity=0.554 Sum_probs=39.6
Q ss_pred CCchhhccccCCCCccchhh-hhhhhhhcccccccCCCC----CCCCCceeehhhh
Q psy15639 11 GNCRVCLKSFKPDDYSRVCY-ECHQKVCEDCASYSKLDE----NQDENTWRCSICR 61 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~-eCqqkVCEDCASYSkl~~----~ed~~~WrCSvCR 61 (135)
..|-+|+|.+.++++---|. .|+.-.=-+|...+...- .+....|.|..|.
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 47999999999999999999 998777778887765211 1223589999996
No 87
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=75.96 E-value=1 Score=20.86 Aligned_cols=13 Identities=31% Similarity=0.654 Sum_probs=10.1
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 2 ~~~C~~C~~~f~~ 14 (29)
T 1ard_A 2 SFVCEVCTRAFAR 14 (29)
T ss_dssp CCBCTTTCCBCSS
T ss_pred CeECCCCCcccCC
Confidence 3568999999874
No 88
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=74.96 E-value=0.66 Score=29.81 Aligned_cols=31 Identities=23% Similarity=0.690 Sum_probs=25.5
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhccccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS 42 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS 42 (135)
-.|.||...|+ .+....|.+|.+..|+.|..
T Consensus 4 ~~C~~C~~~~~-~~av~~C~~C~~~~C~~Cl~ 34 (101)
T 2jun_A 4 VLCQFCDQDPA-QDAVKTCVTCEVSYCDECLK 34 (101)
T ss_dssp CBCTTCCSSSC-CBCCEEETTTTEEECHHHHH
T ss_pred CCCcCCCCCCC-CCceEECCcCChHHhHHHCH
Confidence 46999998753 35678899999999999976
No 89
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=74.59 E-value=1.7 Score=31.26 Aligned_cols=52 Identities=23% Similarity=0.560 Sum_probs=33.1
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...|.||.++ ++ --.|+.|..-.-..|-.-. +. .-....|.|..|+.+...-
T Consensus 4 ~~~C~~C~~~---g~-ll~Cd~C~~~~H~~C~~p~-l~-~~p~~~W~C~~C~~~~~~~ 55 (184)
T 3o36_A 4 EDWCAVCQNG---GE-LLCCEKCPKVFHLSCHVPT-LT-NFPSGEWICTFCRDLSKPE 55 (184)
T ss_dssp CSSCTTTCCC---SS-CEECSSSSCEECTTTSSSC-CS-SCCSSCCCCTTTSCSSSCS
T ss_pred CCccccCCCC---Ce-eeecCCCCcccCccccCCC-CC-CCCCCCEECccccCccccc
Confidence 3679999865 66 4567778766666664221 11 1123569999999877543
No 90
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=74.06 E-value=1.1 Score=31.40 Aligned_cols=47 Identities=15% Similarity=0.366 Sum_probs=34.0
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
.-.|.||+..|+.- .. ..|.|..|..|..-.-. .....|.+||..+.
T Consensus 31 ~~~C~IC~~~~~~p--v~--~~CgH~FC~~Ci~~~~~-----~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 31 KYLCSACRNVLRRP--FQ--AQCGHRYCSFCLASILS-----SGPQNCAACVHEGI 77 (141)
T ss_dssp GGBCTTTCSBCSSE--EE--CTTSCEEEHHHHHHHGG-----GSCEECHHHHHTTC
T ss_pred CcCCCCCChhhcCc--EE--CCCCCccCHHHHHHHHh-----cCCCCCCCCCCccc
Confidence 45799999998643 22 38999999999754321 23468999999764
No 91
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=75.37 E-value=0.72 Score=21.47 Aligned_cols=13 Identities=31% Similarity=0.427 Sum_probs=9.9
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 3468899998864
No 92
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=72.74 E-value=2 Score=29.39 Aligned_cols=15 Identities=27% Similarity=1.035 Sum_probs=12.2
Q ss_pred Cceeehhhhhhhhcc
Q psy15639 53 NTWRCSICRRKLQSR 67 (135)
Q Consensus 53 ~~WrCSvCRRK~~sr 67 (135)
..|.|..|..+++.+
T Consensus 98 g~W~C~~C~~~~~~k 112 (114)
T 2kwj_A 98 GSWSCHLCWELLKEK 112 (114)
T ss_dssp SCCCCHHHHHHHHHT
T ss_pred CCeECccccchhhcc
Confidence 579999999887654
No 93
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=72.35 E-value=2 Score=27.57 Aligned_cols=54 Identities=20% Similarity=0.380 Sum_probs=35.1
Q ss_pred CCCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 4 DKPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 4 ~kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
+..+.-...|.||.++ ++ --.|..|..-.=-.|....-. + --...|.|..|...
T Consensus 6 ~~~~~~~~~C~vC~~~---~~-ll~Cd~C~~~~H~~Cl~P~l~-~-~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 6 QQNLAPGARCGVCGDG---TD-VLRCTHCAAAFHWRCHFPAGT-S-RPGTGLRCRSCSGD 59 (66)
T ss_dssp TTCCCTTCCCTTTSCC---TT-CEECSSSCCEECHHHHCTTTC-C-CCSSSCCCTTTTTC
T ss_pred ccCCCCCCCcCCCCCC---Ce-EEECCCCCCceecccCCCccC-c-CCCCCEECccccCC
Confidence 3444555679999864 55 567888887777777643211 1 12356999999754
No 94
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=71.37 E-value=0.45 Score=29.80 Aligned_cols=52 Identities=19% Similarity=0.459 Sum_probs=35.0
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
....-.|.||+.-|. +.. +-..|.|..|..|..-.-.. .....|.+||..+.
T Consensus 10 ~~~~~~C~IC~~~~~--~p~-~~~~CgH~fC~~Ci~~~~~~----~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 10 IPDELLCLICKDIMT--DAV-VIPCCGNSYCDECIRTALLE----SDEHTCPTCHQNDV 61 (92)
T ss_dssp CCTTTEETTTTEECS--SCE-ECTTTCCEECHHHHHHHHHH----CTTCCCTTTCCSSC
T ss_pred CCcCCCCCCCChhhc--Cce-ECCCCCCHHHHHHHHHHHHh----cCCCcCcCCCCcCC
Confidence 345567999999987 333 22349999999997422111 12368999998763
No 95
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.00 E-value=2.6 Score=20.69 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=12.5
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..+.-.|.+|.|+|.-
T Consensus 6 ~~~~~~C~~C~k~f~~ 21 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKS 21 (36)
T ss_dssp CCSSCBCTTTCCBCSS
T ss_pred CCCCeecCcCCCCcCc
Confidence 3466789999999974
No 96
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=70.33 E-value=1.5 Score=29.37 Aligned_cols=54 Identities=19% Similarity=0.517 Sum_probs=38.5
Q ss_pred CCCchhhcccc-CCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSF-KPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsf-kP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...|.||.++- ..++.--.|+.|..-+=-.|......+ ...|.|..|..+....
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP----~g~W~C~~C~~~~~~~ 79 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIP----EGQWLCRHCLQSRARP 79 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCC----SSCCCCHHHHHHTTSC
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccC----CCceECccccCccchh
Confidence 46799999864 345566778888877666776655433 3689999998876544
No 97
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.63 E-value=0.85 Score=28.06 Aligned_cols=16 Identities=25% Similarity=0.787 Sum_probs=11.5
Q ss_pred CCceeehhhhhhhhcc
Q psy15639 52 ENTWRCSICRRKLQSR 67 (135)
Q Consensus 52 ~~~WrCSvCRRK~~sr 67 (135)
...|.|.+|.+....+
T Consensus 63 ~~~~~C~~C~~~f~~~ 78 (110)
T 2csh_A 63 IKPYECNICAKRFMWR 78 (110)
T ss_dssp CCCEECSSSCCEESCH
T ss_pred CCCeeCCCCcchhcCH
Confidence 4568999998765543
No 98
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=69.27 E-value=4.1 Score=25.24 Aligned_cols=51 Identities=24% Similarity=0.518 Sum_probs=31.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
.-...|.||.+. + ---.|+.|..-.=-.|..-. +++ -....|.|..|..+.
T Consensus 7 ~~~~~C~vC~~~---g-~ll~Cd~C~~~fH~~Cl~pp-l~~-~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 7 HHMEFCRVCKDG---G-ELLCCDTCPSSYHIHCLNPP-LPE-IPNGEWLCPRCTCPA 57 (61)
T ss_dssp SSCSSCTTTCCC---S-SCBCCSSSCCCBCSSSSSSC-CSS-CCSSCCCCTTTTTTC
T ss_pred CCCCcCCCCCCC---C-CEEEcCCCCHHHcccccCCC-cCc-CCCCccCChhhcCch
Confidence 345679999863 3 35667777766555665522 111 123589999998653
No 99
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=68.90 E-value=1.1 Score=38.05 Aligned_cols=56 Identities=16% Similarity=0.403 Sum_probs=41.1
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
...-.| +|++.+.++++---|+.|+.-.=.+|...+.... ++...|.|..|+.+..
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~-~~~~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHA-VDIDLYHCPNCAVLHG 90 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGG-GGEEEBCCHHHHHHHC
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccc-cCCCEEECCCCcCCcC
Confidence 334457 9999988888888899888666667877654332 3356899999997653
No 100
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.87 E-value=2.4 Score=24.74 Aligned_cols=31 Identities=19% Similarity=0.627 Sum_probs=23.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhccccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS 42 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS 42 (135)
.....|.||+..|+ +...+ .|.|..|.+|..
T Consensus 18 ~~~~~C~IC~~~~~--~p~~~--~CgH~fC~~Ci~ 48 (63)
T 2ysj_A 18 QEEVICPICLDILQ--KPVTI--DCGHNFCLKCIT 48 (63)
T ss_dssp CCCCBCTTTCSBCS--SCEEC--TTSSEECHHHHH
T ss_pred ccCCCCCcCCchhC--CeEEe--CCCCcchHHHHH
Confidence 34568999999887 34444 799999999974
No 101
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=68.79 E-value=1.7 Score=19.90 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=10.2
Q ss_pred CCCchhhccccCCC
Q psy15639 10 LGNCRVCLKSFKPD 23 (135)
Q Consensus 10 ~g~CRVClKsfkP~ 23 (135)
+-.|.+|.|+|.-.
T Consensus 2 ~~~C~~C~~~f~~~ 15 (29)
T 2m0e_A 2 EHKCPHCDKKFNQV 15 (29)
T ss_dssp CCCCSSCCCCCCTT
T ss_pred CCcCCCCCcccCCH
Confidence 34688999988643
No 102
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=68.32 E-value=2.5 Score=28.05 Aligned_cols=57 Identities=26% Similarity=0.590 Sum_probs=36.8
Q ss_pred CCchhhccccCC-CCccchhhhhhhhhhcccccccCCCC---CCCCCceeehhhhhhhhccc
Q psy15639 11 GNCRVCLKSFKP-DDYSRVCYECHQKVCEDCASYSKLDE---NQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 11 g~CRVClKsfkP-~e~~~tC~eCqqkVCEDCASYSkl~~---~ed~~~WrCSvCRRK~~sr~ 68 (135)
..|.||.+.-.+ ++.--.|+.|..-+=-.|-.-. +.. ......|.|..|..+++.+.
T Consensus 17 ~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Pp-l~~~~~~~p~g~W~C~~C~~~~~~~~ 77 (88)
T 1wev_A 17 LACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQ-VTDKEVNDPRLVWYCARCTRQMKRMA 77 (88)
T ss_dssp CSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSC-CCHHHHHCTTCCCCCHHHHHHHCCST
T ss_pred CcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCc-ccccccCCCCCCeeCccccchhhhhc
Confidence 469999987543 3556677777765555554321 221 13457899999998876555
No 103
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.59 E-value=3.8 Score=24.79 Aligned_cols=47 Identities=26% Similarity=0.622 Sum_probs=31.3
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhh
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRR 62 (135)
.....|.||.+. + .--.|+.|..-.=-.|.. ....+ ...|.|..|..
T Consensus 7 ~~~~~C~vC~~~---g-~ll~Cd~C~~~~H~~Cl~ppl~~~p----~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIP----KGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS---S-CCEECSSSSCEECSSSSSSCCCSCC----CSSCCCHHHHC
T ss_pred CCCCCCccCCCC---C-eEEEcCCCCcceECccCCCCcCCCC----CCceEChhhhC
Confidence 445679999984 4 345678777666666665 23222 35899999964
No 104
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=66.84 E-value=1.2 Score=20.85 Aligned_cols=13 Identities=38% Similarity=0.621 Sum_probs=10.0
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (28)
T 2kvf_A 3 PYSCSVCGKRFSL 15 (28)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCCCcccCC
Confidence 4568999999874
No 105
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=66.80 E-value=0.46 Score=31.16 Aligned_cols=49 Identities=16% Similarity=0.314 Sum_probs=34.0
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
..|.||+..|+. ... ..|.|..|..|..-.-.. ..-.|.+||..+....
T Consensus 24 ~~C~IC~~~~~~--p~~--~~CgH~fC~~Ci~~~~~~-----~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 24 ISCQICEHILAD--PVE--TSCKHLFCRICILRCLKV-----MGSYCPSCRYPCFPTD 72 (116)
T ss_dssp TBCTTTCSBCSS--EEE--CTTSCEEEHHHHHHHHHH-----TCSBCTTTCCBCCGGG
T ss_pred CCCCCCCcHhcC--cEE--cCCCCcccHHHHHHHHhH-----CcCcCCCCCCCCCHhh
Confidence 469999999863 333 379999999997422111 1247999999877644
No 106
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=66.78 E-value=2 Score=19.79 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=10.0
Q ss_pred CCchhhccccCCC
Q psy15639 11 GNCRVCLKSFKPD 23 (135)
Q Consensus 11 g~CRVClKsfkP~ 23 (135)
-.|.+|.|+|.-.
T Consensus 3 ~~C~~C~k~f~~~ 15 (30)
T 1klr_A 3 YQCQYCEFRSADS 15 (30)
T ss_dssp CCCSSSSCCCSCS
T ss_pred ccCCCCCCccCCH
Confidence 4688999998753
No 107
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=66.71 E-value=1.4 Score=30.16 Aligned_cols=24 Identities=38% Similarity=0.920 Sum_probs=18.6
Q ss_pred CCchhhccccCCCCccc-hhhhhhh
Q psy15639 11 GNCRVCLKSFKPDDYSR-VCYECHQ 34 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~-tC~eCqq 34 (135)
.-|+-|++-|..+++.. .|..|+.
T Consensus 74 ~~C~~CG~~~e~~~~~~~~CP~Cgs 98 (119)
T 2kdx_A 74 LECKDCSHVFKPNALDYGVCEKCHS 98 (119)
T ss_dssp EECSSSSCEECSCCSTTCCCSSSSS
T ss_pred EEcCCCCCEEeCCCCCCCcCccccC
Confidence 46999999999988866 6666654
No 108
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=66.69 E-value=1.5 Score=20.11 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=9.1
Q ss_pred CchhhccccCC
Q psy15639 12 NCRVCLKSFKP 22 (135)
Q Consensus 12 ~CRVClKsfkP 22 (135)
.|.+|.|+|.-
T Consensus 3 ~C~~C~k~f~~ 13 (27)
T 1znf_A 3 KCGLCERSFVE 13 (27)
T ss_dssp BCSSSCCBCSS
T ss_pred cCCCCCCcCCC
Confidence 58899999974
No 109
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=66.63 E-value=2.3 Score=19.85 Aligned_cols=12 Identities=25% Similarity=0.736 Sum_probs=9.3
Q ss_pred CCchhhccccCC
Q psy15639 11 GNCRVCLKSFKP 22 (135)
Q Consensus 11 g~CRVClKsfkP 22 (135)
-.|.+|.|+|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1paa_A 3 YACGLCNRAFTR 14 (30)
T ss_dssp SBCTTTCCBCSS
T ss_pred cCCcccCcccCC
Confidence 468889988864
No 110
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.30 E-value=2.6 Score=21.49 Aligned_cols=16 Identities=19% Similarity=0.563 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.++-.|.+|.|+|.-.
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (42)
T 2yte_A 8 EKPYSCAECKETFSDN 23 (42)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeECCCCCCccCCH
Confidence 3567899999999753
No 111
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=65.77 E-value=1.4 Score=20.32 Aligned_cols=13 Identities=31% Similarity=0.588 Sum_probs=9.7
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 3 ~~~C~~C~~~f~~ 15 (30)
T 2m0d_A 3 PYQCDYCGRSFSD 15 (30)
T ss_dssp CEECTTTCCEESC
T ss_pred CccCCCCCcccCC
Confidence 3568899998863
No 112
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.43 E-value=2.3 Score=21.11 Aligned_cols=16 Identities=31% Similarity=0.631 Sum_probs=12.2
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..+.-.|.+|.|+|.-
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2els_A 6 SGKIFTCEYCNKVFKF 21 (36)
T ss_dssp CCCCEECTTTCCEESS
T ss_pred CCCCEECCCCCceeCC
Confidence 4456789999999863
No 113
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=68.85 E-value=1.3 Score=20.81 Aligned_cols=12 Identities=33% Similarity=0.780 Sum_probs=9.0
Q ss_pred CCchhhccccCC
Q psy15639 11 GNCRVCLKSFKP 22 (135)
Q Consensus 11 g~CRVClKsfkP 22 (135)
-.|.+|.|+|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 468888888864
No 114
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.55 E-value=3.1 Score=21.41 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2en7_A 10 MKPYVCNECGKAFRSK 25 (44)
T ss_dssp SSSSCCTTTCCCCSSH
T ss_pred CcCeECCCCCCccCCH
Confidence 4567899999999753
No 115
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.52 E-value=3 Score=21.27 Aligned_cols=15 Identities=27% Similarity=0.549 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 9 EKPYRCDQCGKAFSQ 23 (42)
T ss_dssp CCSBCCTTTTCCBSS
T ss_pred CCCeeCCCccchhCC
Confidence 456789999999974
No 116
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.49 E-value=2.1 Score=21.32 Aligned_cols=15 Identities=47% Similarity=0.771 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (37)
T 2elo_A 7 GRSYSCPVCEKSFSE 21 (37)
T ss_dssp CCCCEETTTTEECSS
T ss_pred CCCcCCCCCCCccCC
Confidence 355679999999974
No 117
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=64.30 E-value=1.4 Score=20.62 Aligned_cols=13 Identities=15% Similarity=0.416 Sum_probs=9.9
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvh_A 3 PFSCSLCPQRSRD 15 (27)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCcChhhCC
Confidence 4568899998863
No 118
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=64.15 E-value=3.1 Score=20.62 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.++-.|.+|.|+|.-
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSR 23 (37)
T ss_dssp SSSBCCTTTCCCBSS
T ss_pred CCCccCCCCCcccCc
Confidence 355679999999964
No 119
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=63.94 E-value=1.6 Score=20.06 Aligned_cols=12 Identities=42% Similarity=0.789 Sum_probs=9.1
Q ss_pred CCchhhccccCC
Q psy15639 11 GNCRVCLKSFKP 22 (135)
Q Consensus 11 g~CRVClKsfkP 22 (135)
-.|.+|.|+|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2m0f_A 3 LKCRECGKQFTT 14 (29)
T ss_dssp EECTTTSCEESC
T ss_pred ccCCCCCCccCC
Confidence 468888888864
No 120
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=63.73 E-value=2.6 Score=27.06 Aligned_cols=48 Identities=29% Similarity=0.726 Sum_probs=27.5
Q ss_pred CchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK 63 (135)
.|.||+++-..++ .-.|+.|..-.=-.|.. ..+.++ ...|.|..|..+
T Consensus 20 ~C~~C~~~~~~~~-ll~CD~C~~~yH~~Cl~Ppl~~~P~---g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDK-QLMCDECDMAFHIYCLDPPLSSVPS---EDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGG-EEECTTTCCEEEGGGSSSCCSSCCS---SSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCC-EEEcCCCCCceecccCCCCcCCCCC---CCCcCCcCccCc
Confidence 4667777654443 34677666444344544 333332 238999999753
No 121
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=63.69 E-value=1.4 Score=20.83 Aligned_cols=13 Identities=15% Similarity=0.378 Sum_probs=10.0
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (27)
T 2kvg_A 3 PYRCPLCRAGCPS 15 (27)
T ss_dssp TEEETTTTEEESC
T ss_pred CcCCCCCCcccCC
Confidence 3568999999864
No 122
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=63.32 E-value=3.2 Score=24.86 Aligned_cols=44 Identities=30% Similarity=0.624 Sum_probs=30.8
Q ss_pred hhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhh
Q psy15639 15 VCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 15 VClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRR 62 (135)
||++... +++---|..|+.-.=..|..++.. +-...|.|..|++
T Consensus 8 ~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~---~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFA-GRPMIECNECHTWIHLSCAKIRKS---NVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCBCT-TCCEEECTTTCCEEETTTTTCCGG---GCCSSCCCHHHHT
T ss_pred EeCCcCC-CCCEEEcCCCCccccccccCCCcc---cCCCcEECcCCCC
Confidence 6777544 567777888876555677777664 2357999999975
No 123
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.99 E-value=2.8 Score=21.54 Aligned_cols=15 Identities=20% Similarity=0.580 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2eos_A 9 EKPYPCEICGTRFRH 23 (42)
T ss_dssp SCCBCCSSSCCCBSS
T ss_pred CCCEECCCCCCccCC
Confidence 456789999999975
No 124
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=62.64 E-value=1.8 Score=21.10 Aligned_cols=15 Identities=33% Similarity=0.611 Sum_probs=11.3
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 5 ~k~~~C~~C~k~f~~ 19 (35)
T 2elx_A 5 SSGYVCALCLKKFVS 19 (35)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeECCCCcchhCC
Confidence 345679999999864
No 125
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.87 E-value=3.5 Score=21.46 Aligned_cols=15 Identities=27% Similarity=0.614 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (44)
T 2eou_A 10 KTTSECQECGKIFRH 24 (44)
T ss_dssp SCCCCCTTTCCCCSS
T ss_pred CcCeECCCCCcccCC
Confidence 456789999999974
No 126
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=61.13 E-value=7.1 Score=24.15 Aligned_cols=52 Identities=19% Similarity=0.578 Sum_probs=31.2
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
+......|.||.+. + ---.|+.|..-.=-.|.... +++ -....|.|..|.++
T Consensus 7 ~~~~~~~C~vC~~~---g-~ll~CD~C~~~fH~~Cl~p~-l~~-~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG---G-EIILCDTCPRAYHMVCLDPD-MEK-APEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC---S-SEEECSSSSCEEEHHHHCTT-CCS-CCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC---C-cEEECCCCChhhhhhccCCC-CCC-CCCCceECcccccc
Confidence 34456789999973 3 34556666654444554432 111 22468999999764
No 127
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=61.01 E-value=2.2 Score=23.40 Aligned_cols=15 Identities=27% Similarity=0.614 Sum_probs=11.3
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 5 ~kp~~C~~C~k~F~~ 19 (48)
T 3iuf_A 5 DKPYACDICGKRYKN 19 (48)
T ss_dssp TSCEECTTTCCEESS
T ss_pred CcCEECCCcCcccCC
Confidence 355679999999864
No 128
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=60.84 E-value=2.1 Score=27.78 Aligned_cols=33 Identities=27% Similarity=0.662 Sum_probs=26.4
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhccccccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYS 44 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYS 44 (135)
..|.-|.+.|.... ...|..|++-.|-||--|-
T Consensus 16 ~~C~~C~~~~~~~~-~y~C~~C~~~FC~dCD~fi 48 (59)
T 1z60_A 16 RFCYGCQGELKDQH-VYVCAVCQNVFCVDCDVFV 48 (59)
T ss_dssp CEETTTTEECTTSE-EECCTTTTCCBCHHHHHTT
T ss_pred CcccccCcccCCCc-cEECCccCcCcccchhHHH
Confidence 35999999995322 2579999999999998774
No 129
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=60.47 E-value=3 Score=20.85 Aligned_cols=13 Identities=31% Similarity=0.462 Sum_probs=9.7
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 2 p~~C~~C~k~F~~ 14 (33)
T 1rim_A 2 KFACPECPKRFMR 14 (33)
T ss_dssp CCCCSSSCCCCSS
T ss_pred cccCCCCCchhCC
Confidence 3468889998863
No 130
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.44 E-value=3.8 Score=21.35 Aligned_cols=16 Identities=38% Similarity=0.671 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 10 EKPHECRECGKSFSFN 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeeCCCCCchhCCH
Confidence 4567899999999753
No 131
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.31 E-value=3.8 Score=21.33 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQT 25 (46)
T ss_dssp CCTTCCTTTCCCCSSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 4567899999999753
No 132
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.26 E-value=3.9 Score=21.50 Aligned_cols=17 Identities=29% Similarity=0.620 Sum_probs=12.9
Q ss_pred CCCCCchhhccccCCCC
Q psy15639 8 ARLGNCRVCLKSFKPDD 24 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e 24 (135)
.+.-.|.+|.|+|.-..
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (46)
T 2enh_A 10 EKPYECDVCRKAFSHHA 26 (46)
T ss_dssp SSSCBCTTTCCBCSSSH
T ss_pred CCCcCCCCcCchhCCHH
Confidence 45678999999997543
No 133
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.14 E-value=3.8 Score=23.07 Aligned_cols=32 Identities=28% Similarity=0.671 Sum_probs=23.9
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASY 43 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASY 43 (135)
.....|.||+..|+-. .. ..|.|..|.+|..-
T Consensus 13 ~~~~~C~IC~~~~~~p--~~--~~CgH~fC~~Ci~~ 44 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP--VI--IECGHNFCKACITR 44 (58)
T ss_dssp CCCCBCSSSCCBCSSC--CC--CSSCCCCCHHHHHH
T ss_pred ccCCCCccCCcccCcc--Ee--CCCCCccCHHHHHH
Confidence 3456899999998743 22 37999999999753
No 134
>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=60.10 E-value=7.9 Score=27.44 Aligned_cols=25 Identities=32% Similarity=0.493 Sum_probs=19.0
Q ss_pred cccccchHHHHHHHhhccccccccC
Q psy15639 77 TDSLLDVPVLEALQRRHSDVKIGSA 101 (135)
Q Consensus 77 tds~l~vpvlealqrrhsd~klg~~ 101 (135)
.+..||-||..+|.-+|...-+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (228)
T 3ec4_A 4 EDHPLDRPVWNSLGGPQSELDVASG 28 (228)
T ss_dssp -CCGGGSHHHHHHHTTTGGGBCCCT
T ss_pred cccccchhHHHhhcchhhhhcccCC
Confidence 3568999999999999965555543
No 135
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.08 E-value=2.8 Score=21.68 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eoj_A 10 ENPYECCECGKVFSRK 25 (44)
T ss_dssp CCSCEETTTTEECSSH
T ss_pred CcCeeCCCCCCccCCH
Confidence 3557899999999753
No 136
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=59.99 E-value=0.94 Score=38.09 Aligned_cols=49 Identities=18% Similarity=0.495 Sum_probs=35.4
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
..|.||+..|+- -+...|.|..|.+|..--.. ...-.|.+||..+....
T Consensus 333 ~~C~ICle~~~~----pv~lpCGH~FC~~Ci~~wl~-----~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 333 QLCKICAENDKD----VKIEPCGHLMCTSCLTSWQE-----SEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SBCTTTSSSBCC----EEEETTCCEECHHHHHHHHH-----HTCSBCTTTCCBCCEEE
T ss_pred CCCCccCcCCCC----eEEeCCCChhhHHHHHHHHh-----cCCCCCCCCCCccCCce
Confidence 589999988742 24468999999999843211 02347999999988765
No 137
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=59.88 E-value=0.59 Score=32.57 Aligned_cols=49 Identities=20% Similarity=0.495 Sum_probs=33.8
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
..-.|.||+..|+.- .++ .|.|..|.+|..-.-... ..+|.+||..+..
T Consensus 17 ~~~~C~IC~~~~~~p---v~~-~CgH~fC~~Ci~~~~~~~-----~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALREA---VQT-PCGHRFCKACIIKSIRDA-----GHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSSE---EEC-TTSCEEEHHHHHHHHHHH-----CSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcCc---EEC-CCCCHHHHHHHHHHHHhC-----CCCCCCCccCcch
Confidence 345799999998743 233 799999999975432111 1289999877654
No 138
>3ny3_A E3 ubiquitin-protein ligase UBR2; zinc finger-like, ubiquitin ligase, protein binding, lygase,; 1.60A {Homo sapiens} PDB: 3ny2_A 3ny1_A
Probab=59.72 E-value=3.9 Score=27.27 Aligned_cols=21 Identities=24% Similarity=0.616 Sum_probs=18.3
Q ss_pred hhhccccCCCCccchhhhhhh
Q psy15639 14 RVCLKSFKPDDYSRVCYECHQ 34 (135)
Q Consensus 14 RVClKsfkP~e~~~tC~eCqq 34 (135)
.+|.+-|+++|+...|.+|.-
T Consensus 5 ~~Cg~vf~~ge~~Y~C~~C~~ 25 (75)
T 3ny3_A 5 SLCGRVFKVGEPTYSCRDCAV 25 (75)
T ss_dssp -CCCCBCCTTCEEEEETTTBS
T ss_pred CccCCcccCCCEEEECccCCC
Confidence 479999999999999999974
No 139
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=59.44 E-value=2.2 Score=20.95 Aligned_cols=15 Identities=40% Similarity=0.839 Sum_probs=11.4
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 5 ~k~~~C~~C~k~f~~ 19 (35)
T 1srk_A 5 KRPFVCRICLSAFTT 19 (35)
T ss_dssp CSCEECSSSCCEESS
T ss_pred CcCeeCCCCCcccCC
Confidence 345679999999864
No 140
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.21 E-value=4.1 Score=21.39 Aligned_cols=15 Identities=33% Similarity=0.729 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2en9_A 10 KKLFKCNECKKTFTQ 24 (46)
T ss_dssp SCCCBCTTTCCBCSS
T ss_pred CCCEECCccCcccCC
Confidence 456789999999974
No 141
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.81 E-value=4.3 Score=21.23 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eq1_A 10 EKPYKCNECGKAFRA 24 (46)
T ss_dssp SCCCCCTTTTCCCSS
T ss_pred CCCeECCcCChhhCC
Confidence 456789999999975
No 142
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.52 E-value=3.7 Score=21.47 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enf_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4567899999999753
No 143
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.40 E-value=4 Score=21.36 Aligned_cols=16 Identities=25% Similarity=0.538 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq2_A 10 GKPYQCNECGKAFSQT 25 (46)
T ss_dssp SCSSSCCSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4567899999999753
No 144
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=58.24 E-value=4.2 Score=29.98 Aligned_cols=47 Identities=30% Similarity=0.695 Sum_probs=32.5
Q ss_pred CCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhhhh
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
..|.||+++ ++ --.|+.|..-.--+|.. ....+ ...|.|..|+.+..
T Consensus 3 ~~C~~C~~~---g~-ll~Cd~C~~~~H~~Cl~p~l~~~p----~g~W~C~~C~~~~~ 51 (189)
T 2ro1_A 3 TICRVCQKP---GD-LVMCNQCEFCFHLDCHLPALQDVP----GEEWSCSLCHVLPD 51 (189)
T ss_dssp CCBTTTCCC---SS-CCCCTTTCCBCCSTTSTTCCSSCC----CTTCCTTTTSCSCC
T ss_pred CcCccCCCC---Cc-eeECCCCCchhccccCCCCcccCC----CCCCCCcCccCCCC
Confidence 579999965 44 44588888777777763 22222 46799999987754
No 145
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.23 E-value=4.4 Score=21.18 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emg_A 10 ENPFICSECGKVFTHK 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCEECCccCcccCCH
Confidence 4567899999999753
No 146
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.22 E-value=3.8 Score=21.34 Aligned_cols=17 Identities=24% Similarity=0.440 Sum_probs=13.1
Q ss_pred CCCCCchhhccccCCCC
Q psy15639 8 ARLGNCRVCLKSFKPDD 24 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e 24 (135)
.+.-.|.+|.|+|.-..
T Consensus 10 ~k~~~C~~C~k~F~~~~ 26 (47)
T 2epx_A 10 KKPYECIECGKAFIQNT 26 (47)
T ss_dssp CCSBCCSSSCCCBSSHH
T ss_pred CCCEECCccCchhCChH
Confidence 45678999999998543
No 147
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.12 E-value=2.3 Score=21.07 Aligned_cols=15 Identities=33% Similarity=0.811 Sum_probs=11.5
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (36)
T 2elv_A 7 GLLYDCHICERKFKN 21 (36)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCCCCCccCC
Confidence 355679999999874
No 148
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=58.10 E-value=2.4 Score=21.64 Aligned_cols=15 Identities=33% Similarity=0.421 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.++-.|.+|.|+|.-
T Consensus 9 ~~~~~C~~C~k~f~~ 23 (42)
T 2epc_A 9 ETPYLCGQCGKSFTQ 23 (42)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CCCeECCCCCcccCC
Confidence 455789999999974
No 149
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=57.85 E-value=2.1 Score=19.86 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=8.8
Q ss_pred CCchhhccccCC
Q psy15639 11 GNCRVCLKSFKP 22 (135)
Q Consensus 11 g~CRVClKsfkP 22 (135)
-.|.+|.|+|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 458888888864
No 150
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.81 E-value=4.9 Score=21.19 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=12.7
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytm_A 10 EKPYKCMECGKAFGDN 25 (46)
T ss_dssp CCSSSBTTTTBCCSSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 4567899999999753
No 151
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.70 E-value=4 Score=21.56 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eon_A 10 EKPYKCQVCGKAFRVS 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CcccCCCCCCcccCcH
Confidence 4567899999999753
No 152
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.50 E-value=4.1 Score=21.19 Aligned_cols=15 Identities=33% Similarity=0.501 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ep1_A 10 EKPYECSDCGKSFIK 24 (46)
T ss_dssp CCSSCCSSSCCCCSS
T ss_pred CCCcCCCCCCchhCC
Confidence 456789999999974
No 153
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=62.12 E-value=2.2 Score=19.83 Aligned_cols=12 Identities=25% Similarity=0.545 Sum_probs=9.0
Q ss_pred CCchhhccccCC
Q psy15639 11 GNCRVCLKSFKP 22 (135)
Q Consensus 11 g~CRVClKsfkP 22 (135)
-.|.+|.|+|.-
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 468888888863
No 154
>3nis_A E3 ubiquitin-protein ligase UBR1; E3 ubiquitin ligase, UBR BOX, zinc-binding protein, N-END RU ligase, metal binding protein; 1.68A {Saccharomyces cerevisiae} PDB: 3nii_A 3nij_A 3nih_A 3nik_A 3nim_A 3nin_A 3nil_A 3nit_A
Probab=57.28 E-value=2.7 Score=28.62 Aligned_cols=29 Identities=31% Similarity=0.619 Sum_probs=23.2
Q ss_pred hhhccccCCCCccchhhhhhh----hhhccccc
Q psy15639 14 RVCLKSFKPDDYSRVCYECHQ----KVCEDCAS 42 (135)
Q Consensus 14 RVClKsfkP~e~~~tC~eCqq----kVCEDCAS 42 (135)
++|.+.|+++|+...|.+|.- -.|++|--
T Consensus 9 ~~Cg~vf~~ge~~Y~C~~C~~d~tcvlC~~CF~ 41 (82)
T 3nis_A 9 RNCGRKFKIGEPLYRCHECGCDDTCVLCIHCFN 41 (82)
T ss_dssp SCCCCBCCTTCEEEEETTTBSSTTCCBCTTTCC
T ss_pred CCCCCcccCCCEEEEeeccCCCCCceEchhhCC
Confidence 579999999999999999964 25666643
No 155
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.27 E-value=4 Score=21.35 Aligned_cols=15 Identities=27% Similarity=0.518 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2yti_A 10 EKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCTTCCSSSCCCCSS
T ss_pred CcCeECCCCCcccCC
Confidence 456789999999975
No 156
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.20 E-value=3.8 Score=28.16 Aligned_cols=51 Identities=16% Similarity=0.400 Sum_probs=31.6
Q ss_pred CCCchhhccccCCCCccchhhh--hh-hhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYE--CH-QKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~e--Cq-qkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...| ||++..- .+---|+. |. +-.=-.|......+ ...|.|..|+++...|
T Consensus 36 ~~yC-iC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~p----~g~W~Cp~C~~~~~k~ 89 (91)
T 1weu_A 36 PTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP----RGKWFCPRCSQESGPS 89 (91)
T ss_dssp CBCS-TTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSCC----CSSCCCTTTCCCCSSS
T ss_pred CcEE-ECCCCCC--CCEeEecCCCCCCCCEecccCCcCcCC----CCCEECcCccCcCCcC
Confidence 3568 9998653 34555666 54 33333556555443 3679999998876544
No 157
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.19 E-value=4 Score=21.45 Aligned_cols=15 Identities=33% Similarity=0.667 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2em6_A 10 EKCYKCDVCGKEFSQ 24 (46)
T ss_dssp CCCCBCSSSCCBCSS
T ss_pred CCCeECCCCCcccCC
Confidence 456789999999974
No 158
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.19 E-value=4.7 Score=21.07 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=12.6
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CcCeECCCCCCeeCCH
Confidence 4567899999999753
No 159
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.16 E-value=4.2 Score=21.25 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2eoq_A 10 EKPFKCDICGKSFCG 24 (46)
T ss_dssp SCSCCCSSSCCCCSS
T ss_pred CCCcCCCcCCchhCC
Confidence 456789999999975
No 160
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.68 E-value=4.3 Score=21.32 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoh_A 10 KKPYECKECRKTFIQI 25 (46)
T ss_dssp SCSCCCSSSCCCCSSH
T ss_pred CCCcCCCCcCchhCCH
Confidence 4567899999999753
No 161
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.47 E-value=5.1 Score=20.83 Aligned_cols=16 Identities=44% Similarity=0.775 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq4_A 10 EKLYNCKECGKSFSRA 25 (46)
T ss_dssp CCCCCBTTTTBCCSCH
T ss_pred CCCeECCCCCCccCch
Confidence 3557899999999754
No 162
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.36 E-value=4.3 Score=21.11 Aligned_cols=16 Identities=31% Similarity=0.432 Sum_probs=12.5
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eov_A 10 EKPYKCSDCGKSFTWK 25 (46)
T ss_dssp CCSCBCSSSCCBCSSH
T ss_pred CCCccCCccChhhCCH
Confidence 4567899999999753
No 163
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=56.33 E-value=4.2 Score=21.75 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=14.1
Q ss_pred CCCCCCCCchhhccccCCC
Q psy15639 5 KPAARLGNCRVCLKSFKPD 23 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~ 23 (135)
....+.-.|.+|.|+|.-.
T Consensus 7 ~~~~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDV 25 (48)
T ss_dssp CCCCCSEEETTTTEEESSH
T ss_pred CCCCcCeeCCCCCcccCCH
Confidence 3455667899999999753
No 164
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.17 E-value=4.9 Score=20.99 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=12.5
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCSBCCTTTCCCBSSH
T ss_pred CCCeECCCCCceeCCH
Confidence 4567899999999753
No 165
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.47 E-value=4.5 Score=21.22 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=12.7
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRR 25 (46)
T ss_dssp CSSCBCSSSCCBCSSH
T ss_pred CCCeeCcccCchhCCH
Confidence 4567899999999754
No 166
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=55.45 E-value=2.8 Score=21.45 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 8 ~k~~~C~~C~k~f~~ 22 (42)
T 2el5_A 8 ENPYECSECGKAFNR 22 (42)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCccCCCcChhhCC
Confidence 455679999999875
No 167
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.43 E-value=4.5 Score=21.24 Aligned_cols=16 Identities=25% Similarity=0.534 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSK 25 (46)
T ss_dssp CCSCBCSSSCCBCSCH
T ss_pred CCCcCCCccChhhCCh
Confidence 4567899999999753
No 168
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.30 E-value=4.6 Score=21.20 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=12.5
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emz_A 10 ERPFKCNECGKGFGRR 25 (46)
T ss_dssp CCSCCCSSSCCCCSSH
T ss_pred CCCeECCCCCcccCCH
Confidence 4567899999999754
No 169
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.29 E-value=3.7 Score=21.37 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eq3_A 10 EKPYECNQCGKAFSVR 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCCChhhCCH
Confidence 3556799999999753
No 170
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.00 E-value=4.7 Score=21.24 Aligned_cols=16 Identities=31% Similarity=0.407 Sum_probs=12.6
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eom_A 10 ERGHRCSDCGKFFLQA 25 (46)
T ss_dssp CSSCCCSSSCCCCSSH
T ss_pred CCCcCCCCCCCeeCCh
Confidence 4567899999999753
No 171
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.93 E-value=4.7 Score=21.15 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yth_A 10 EKPFQCEECGKRFTQN 25 (46)
T ss_dssp SSSBCCSSSCCCBSSH
T ss_pred CcCCCCCCCCcccCCH
Confidence 4567899999999753
No 172
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=54.56 E-value=5.3 Score=27.42 Aligned_cols=13 Identities=23% Similarity=0.790 Sum_probs=9.7
Q ss_pred CCCCceeehhhhh
Q psy15639 50 QDENTWRCSICRR 62 (135)
Q Consensus 50 ed~~~WrCSvCRR 62 (135)
+-+..|+|.+|+.
T Consensus 56 dlPddW~CPvCga 68 (81)
T 2kn9_A 56 DIPDDWSCPDCGA 68 (81)
T ss_dssp TSCTTCCCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 4467888888875
No 173
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=54.50 E-value=4.7 Score=21.15 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=13.6
Q ss_pred CCCCCchhhccccCCCCc
Q psy15639 8 ARLGNCRVCLKSFKPDDY 25 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~ 25 (135)
.+.-.|.+|.|+|.-...
T Consensus 10 ~k~~~C~~C~k~f~~~~~ 27 (46)
T 2ely_A 10 EKPFKCVECGKGFSRRSA 27 (46)
T ss_dssp CCSBCCSSSCCCBSSTTH
T ss_pred CCCcccCccCcccCCHHH
Confidence 456789999999986443
No 174
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=54.45 E-value=4.9 Score=21.09 Aligned_cols=16 Identities=25% Similarity=0.582 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emk_A 10 EKPYECKECGKAFSQT 25 (46)
T ss_dssp SCSCBCSSSCCBCSCH
T ss_pred CCceECCCCCchhCCH
Confidence 4567899999999753
No 175
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.41 E-value=3 Score=20.47 Aligned_cols=15 Identities=13% Similarity=0.211 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (36)
T 2elt_A 7 GKPYKCPQCSYASAI 21 (36)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCCCCCCCCCcccCC
Confidence 455679999999864
No 176
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.39 E-value=16 Score=24.40 Aligned_cols=54 Identities=22% Similarity=0.465 Sum_probs=35.0
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
....|.||.+.-. ++..-.|+.|..-.=-.|.. ....+ ...|.|..|..+...+
T Consensus 15 ~~~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~~~P----~g~W~C~~C~~~~~~~ 70 (92)
T 2e6r_A 15 DSYICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLPEIP----RGIWRCPKCILAECKQ 70 (92)
T ss_dssp CCCCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCSSCC----SSCCCCHHHHHHHHSC
T ss_pred CCCCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcccCC----CCCcCCccCcCccccC
Confidence 3457999998743 34566788887655555654 33322 3579999998765443
No 177
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=54.38 E-value=8.9 Score=24.02 Aligned_cols=52 Identities=17% Similarity=0.451 Sum_probs=28.5
Q ss_pred CchhhccccCCCCccchhh--hhhhhhhcccccccCCCC--CCCCCceeehhhhhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCY--ECHQKVCEDCASYSKLDE--NQDENTWRCSICRRKLQ 65 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~--eCqqkVCEDCASYSkl~~--~ed~~~WrCSvCRRK~~ 65 (135)
.| ||++... +.+---|. .|..-.=-.|..++.... .+.+..|.|..||.+.+
T Consensus 12 ~C-~C~~~~~-~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r~ 67 (68)
T 2rsd_A 12 RC-ICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSRA 67 (68)
T ss_dssp CC-TTCCCSC-CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHHT
T ss_pred Ee-ECCCCcC-CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCccc
Confidence 47 7876543 23333444 263322234566654432 22346899999997643
No 178
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.25 E-value=3.5 Score=21.07 Aligned_cols=15 Identities=20% Similarity=0.461 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 9 ~k~~~C~~C~k~f~~ 23 (42)
T 2en2_A 9 EKPYKCETCGARFVQ 23 (42)
T ss_dssp SCSEECTTTCCEESS
T ss_pred CCCEeCCCcChhhCC
Confidence 455679999999874
No 179
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.12 E-value=3 Score=20.64 Aligned_cols=16 Identities=13% Similarity=0.403 Sum_probs=12.3
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..+.-.|.+|.|+|.-
T Consensus 6 ~~k~~~C~~C~k~f~~ 21 (36)
T 2elq_A 6 SGKPFKCSLCEYATRS 21 (36)
T ss_dssp CCCSEECSSSSCEESC
T ss_pred CCCCccCCCCCchhCC
Confidence 3456789999999975
No 180
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.88 E-value=4.1 Score=21.22 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCcChhhCCH
Confidence 4567899999999753
No 181
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=53.48 E-value=3.6 Score=30.26 Aligned_cols=49 Identities=22% Similarity=0.562 Sum_probs=32.1
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhhhhhc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
...|.||.++ ++ --.|+.|..-.--.|.. ....+ ...|.|..|+.+...
T Consensus 7 ~~~C~~C~~~---g~-ll~Cd~C~~~~H~~Cl~p~l~~~p----~~~W~C~~C~~~~~~ 57 (207)
T 3u5n_A 7 EDWCAVCQNG---GD-LLCCEKCPKVFHLTCHVPTLLSFP----SGDWICTFCRDIGKP 57 (207)
T ss_dssp CSSBTTTCCC---EE-EEECSSSSCEECTTTSSSCCSSCC----SSCCCCTTTSCSSSC
T ss_pred CCCCCCCCCC---Cc-eEEcCCCCCccCCccCCCCCCCCC----CCCEEeCceeCcccc
Confidence 4679999854 55 45677777666666653 22222 356999999976543
No 182
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=53.40 E-value=6.4 Score=30.58 Aligned_cols=38 Identities=16% Similarity=0.451 Sum_probs=30.2
Q ss_pred CCCCCCchhhccccC-CCCccchhhhhhhhhhccccccc
Q psy15639 7 AARLGNCRVCLKSFK-PDDYSRVCYECHQKVCEDCASYS 44 (135)
Q Consensus 7 ~~r~g~CRVClKsfk-P~e~~~tC~eCqqkVCEDCASYS 44 (135)
..++-.|.+|.+.|. -.---+.|..|...||..|+..-
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 456788999999885 44455679999999999998743
No 183
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=53.25 E-value=5.2 Score=20.90 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 10 EKTWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 3557899999999753
No 184
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.16 E-value=3.2 Score=21.73 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emy_A 10 ENPYECHECGKAFSR 24 (46)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CcCcCCCCCCcccCc
Confidence 455679999999975
No 185
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=53.06 E-value=3.8 Score=20.81 Aligned_cols=14 Identities=29% Similarity=0.783 Sum_probs=10.6
Q ss_pred CCCCchhhccccCC
Q psy15639 9 RLGNCRVCLKSFKP 22 (135)
Q Consensus 9 r~g~CRVClKsfkP 22 (135)
+.-.|.+|.|+|.-
T Consensus 5 k~~~C~~C~k~f~~ 18 (39)
T 1njq_A 5 RSYTCSFCKREFRS 18 (39)
T ss_dssp SSEECTTTCCEESS
T ss_pred CceECCCCCcccCC
Confidence 44678999998864
No 186
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.04 E-value=3.5 Score=21.50 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eow_A 10 EKPYKCNECGKAFRA 24 (46)
T ss_dssp CCCEECTTSCCEESS
T ss_pred CCCeeccccCChhcC
Confidence 355679999999874
No 187
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.99 E-value=3.6 Score=21.53 Aligned_cols=16 Identities=25% Similarity=0.578 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRN 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4567799999999753
No 188
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.98 E-value=3.7 Score=21.40 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2eor_A 10 EKPYNCEECGKAFIH 24 (46)
T ss_dssp CCSEECTTTCCEESS
T ss_pred CcCccCCCCCCCcCC
Confidence 355679999999975
No 189
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.44 E-value=5.3 Score=20.93 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=13.0
Q ss_pred CCCCCCchhhccccCCC
Q psy15639 7 AARLGNCRVCLKSFKPD 23 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~ 23 (135)
..+.-.|.+|.|+|.-.
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGS 25 (46)
T ss_dssp CCCTTCCSSSCCCCSSH
T ss_pred CCCCeeCCCCCcccCCH
Confidence 34567899999999754
No 190
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.38 E-value=3.3 Score=21.77 Aligned_cols=16 Identities=25% Similarity=0.517 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.++-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoy_A 10 EKCFKCNKCEKTFSCS 25 (46)
T ss_dssp SCCEECSSSCCEESSS
T ss_pred CCCEECcCCCCcCCCH
Confidence 3556799999999754
No 191
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.26 E-value=3.3 Score=20.62 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 7 ~k~~~C~~C~k~f~~~ 22 (37)
T 2elp_A 7 GRAMKCPYCDFYFMKN 22 (37)
T ss_dssp CCCEECSSSSCEECSS
T ss_pred CCCeECCCCChhhccC
Confidence 3456799999999753
No 192
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.17 E-value=3.4 Score=21.65 Aligned_cols=15 Identities=27% Similarity=0.412 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (44)
T 2epv_A 10 EKPYECNECGKAFIW 24 (44)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCeECCCCCcccCc
Confidence 455679999999874
No 193
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=52.14 E-value=3.8 Score=20.18 Aligned_cols=11 Identities=36% Similarity=0.697 Sum_probs=7.8
Q ss_pred CCchhhccccC
Q psy15639 11 GNCRVCLKSFK 21 (135)
Q Consensus 11 g~CRVClKsfk 21 (135)
-.|.+|.|+|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 45778888775
No 194
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.73 E-value=3.5 Score=21.41 Aligned_cols=16 Identities=25% Similarity=0.582 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 8 ~k~~~C~~C~k~f~~~ 23 (44)
T 2emx_A 8 EKPFGCSCCEKAFSSK 23 (44)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CcCccCCCCCcccCCH
Confidence 4557899999999754
No 195
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.49 E-value=4 Score=21.35 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emh_A 10 ERPYICTVCGKAFTDR 25 (46)
T ss_dssp CCSEECTTTCCEESSH
T ss_pred CCCcCCCCCCchhCCH
Confidence 3567899999999753
No 196
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.34 E-value=3.6 Score=21.36 Aligned_cols=16 Identities=31% Similarity=0.526 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (44)
T 2eox_A 10 SKSYNCNECGKAFTRI 25 (44)
T ss_dssp CCCEEETTTTEEESSS
T ss_pred CCCeECcccCcccCCH
Confidence 3556799999999754
No 197
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=51.30 E-value=6.1 Score=26.24 Aligned_cols=36 Identities=22% Similarity=0.552 Sum_probs=21.7
Q ss_pred chhhhhhhhhhcccccccCC--CCCCCCCceeehhhhh
Q psy15639 27 RVCYECHQKVCEDCASYSKL--DENQDENTWRCSICRR 62 (135)
Q Consensus 27 ~tC~eCqqkVCEDCASYSkl--~~~ed~~~WrCSvCRR 62 (135)
..|..|..-+=..|..+... .+++..+.|.|..|+.
T Consensus 76 ~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~ 113 (117)
T 4bbq_A 76 MECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQ 113 (117)
T ss_dssp EEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC-
T ss_pred EEeeecCCeEECCCCCCCccccccccCCCCeECCCCcC
Confidence 34555555555557766532 3455567799988864
No 198
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=50.91 E-value=5.8 Score=26.47 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=29.3
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCC
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLD 47 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~ 47 (135)
...|.+|.+.. ..++.+|.+|.-.+=..||......
T Consensus 47 ~~~C~~C~~~~--~~~~Y~C~~C~f~lH~~Ca~~p~~~ 82 (89)
T 1v5n_A 47 VYTCDKCEEEG--TIWSYHCDECDFDLHAKCALNEDTK 82 (89)
T ss_dssp SCCCTTTSCCC--CSCEEECTTTCCCCCHHHHHCSSCS
T ss_pred CeEeCCCCCcC--CCcEEEcCCCCCeEcHHhcCCCCcc
Confidence 46799999875 5789999999988889999876543
No 199
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=50.68 E-value=6.5 Score=25.94 Aligned_cols=47 Identities=30% Similarity=0.719 Sum_probs=22.9
Q ss_pred CchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRR 62 (135)
.|.||.++-.++ ..-.|+.|..-.=-.|.. ..+.++ .+.|.|..|+.
T Consensus 28 ~C~vC~~~~d~~-~ll~CD~C~~~yH~~Cl~PpL~~~P~---g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPD-KQLMCDECDMAFHIYCLDPPLSSVPS---EDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGG-GEEECTTTCCEEETTTSSSCCSSCCS---SSCCCCTTTC-
T ss_pred cCCccCCCCCCc-ceeEeCCCCCccCcccCCCcccCCCC---CCceECcCccc
Confidence 466666654333 234455554433333433 222222 34499998864
No 200
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.57 E-value=3.7 Score=21.48 Aligned_cols=15 Identities=33% Similarity=0.561 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~~~~~C~~C~k~F~~ 24 (46)
T 2emi_A 10 ERHYECSECGKAFIQ 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCCCCCCCCcccCC
Confidence 355679999999974
No 201
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.53 E-value=3.7 Score=21.60 Aligned_cols=15 Identities=33% Similarity=0.583 Sum_probs=11.5
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2ytp_A 10 ERHYECSECGKAFAR 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCcCCcccCC
Confidence 355679999999874
No 202
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.52 E-value=3.7 Score=21.48 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 10 EKPYKCEECGKGFICR 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCccCCCccchhCCH
Confidence 3566799999999753
No 203
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.49 E-value=2.5 Score=21.45 Aligned_cols=15 Identities=27% Similarity=0.321 Sum_probs=11.1
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.++-.|.+|.|+|.-
T Consensus 7 ~k~~~C~~C~k~f~~ 21 (37)
T 2elm_A 7 GHLYYCSQCHYSSIT 21 (37)
T ss_dssp SCEEECSSSSCEEEC
T ss_pred CcCeECCCCCcccCC
Confidence 345678999998864
No 204
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.99 E-value=4.3 Score=21.21 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2yso_A 10 EKSHQCRECGEIFFQY 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCEEccccChhhCCH
Confidence 3556799999999753
No 205
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.91 E-value=4.4 Score=21.06 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en8_A 10 EKSHTCDECGKNFCYI 25 (46)
T ss_dssp CSSEECTTTCCEESSH
T ss_pred CCCeECCCcCcccCCH
Confidence 3556799999999753
No 206
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.82 E-value=4.5 Score=21.15 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=12.8
Q ss_pred CCCCCchhhccccCCCC
Q psy15639 8 ARLGNCRVCLKSFKPDD 24 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e 24 (135)
.+.-.|.+|.|+|.-..
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRV 26 (46)
T ss_dssp CCSEECTTTCCEESSSH
T ss_pred CCCeECCCCCcccCCHH
Confidence 45678999999997543
No 207
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.75 E-value=4.4 Score=20.77 Aligned_cols=16 Identities=25% Similarity=0.621 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (44)
T 2eof_A 10 EKPYECNECQKAFNTK 25 (44)
T ss_dssp CCSEECTTTCCEESCH
T ss_pred CCCeECCCCCcccCCH
Confidence 3456799999998753
No 208
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.74 E-value=3.9 Score=21.21 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=12.5
Q ss_pred CCCCCchhhccccCCCC
Q psy15639 8 ARLGNCRVCLKSFKPDD 24 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e 24 (135)
.++-.|.+|.|+|.-..
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (44)
T 2yu5_A 10 ENPFKCSKCDRVFTQRN 26 (44)
T ss_dssp CCSEECSSSSCEESSSH
T ss_pred CCCeECCCCCchhCCHH
Confidence 35567999999997543
No 209
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.74 E-value=3.9 Score=21.28 Aligned_cols=15 Identities=33% Similarity=0.461 Sum_probs=11.5
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2yts_A 10 EKPYICNECGKSFIQ 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCEECCCCChhhCC
Confidence 355679999999875
No 210
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.66 E-value=4.5 Score=20.94 Aligned_cols=15 Identities=20% Similarity=0.510 Sum_probs=11.5
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (44)
T 2emb_A 10 RKRYECSKCQATFNL 24 (44)
T ss_dssp CSSEECTTTCCEESC
T ss_pred CCCeECCCCCCccCC
Confidence 345679999999974
No 211
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.65 E-value=4 Score=21.37 Aligned_cols=16 Identities=31% Similarity=0.750 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2em3_A 10 EKPYECKVCSKAFTQK 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCcccCCH
Confidence 3556799999999753
No 212
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.64 E-value=3.9 Score=21.39 Aligned_cols=16 Identities=25% Similarity=0.499 Sum_probs=12.4
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2enc_A 10 EKPFKCEECGKGFYTN 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCcCCCCCCCcCCCh
Confidence 4567899999999753
No 213
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.55 E-value=3.9 Score=21.28 Aligned_cols=15 Identities=27% Similarity=0.614 Sum_probs=11.5
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 10 EKPFECSECQKAFNT 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCcCCCCCCcccCC
Confidence 355679999999864
No 214
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=49.55 E-value=3.9 Score=21.28 Aligned_cols=16 Identities=38% Similarity=0.613 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 10 EKPYNCKECGKSFRWA 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCccccccCCh
Confidence 3567899999999753
No 215
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.54 E-value=6.4 Score=20.49 Aligned_cols=15 Identities=20% Similarity=0.228 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 8 ~k~~~C~~C~k~f~~ 22 (43)
T 2yrm_A 8 NGAFFCNECDCRFSE 22 (43)
T ss_dssp SCCBCCSSSCCCBSS
T ss_pred CCCEECCCCCCeeCC
Confidence 456789999999974
No 216
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.42 E-value=4 Score=21.34 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en1_A 10 EKPFKCEECGKRFTQN 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeeCCCCCcccCCH
Confidence 4556799999999753
No 217
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=49.30 E-value=4 Score=21.46 Aligned_cols=15 Identities=33% Similarity=0.492 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emj_A 10 EKPFECAECGKSFSI 24 (46)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCCEECCCCCcccCC
Confidence 355679999999974
No 218
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=48.88 E-value=4.9 Score=25.44 Aligned_cols=33 Identities=27% Similarity=0.573 Sum_probs=23.7
Q ss_pred CCCCCCchhhccccCCCCccchhhhhh---hhhhcc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECH---QKVCED 39 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCq---qkVCED 39 (135)
..++..|.+|.+.+.-+--...|.+|. |+.|.+
T Consensus 16 ~~~~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~ 51 (61)
T 4b6d_A 16 VIKPESCVPCGKRIKFGKLSLKCRDCRVVSHPECRD 51 (61)
T ss_dssp CCSCEECTTTCCEECTTCEEEEESSSSCEECGGGGG
T ss_pred ccCCcccccccCEEEEeeEeeECCCCCCeEchhHhh
Confidence 457789999999887555556788887 555544
No 219
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.83 E-value=4 Score=21.43 Aligned_cols=16 Identities=31% Similarity=0.528 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eoo_A 10 ERPYGCNECGKNFGRH 25 (46)
T ss_dssp CCCEECSSSCCEESSH
T ss_pred CCCEEccccCcccCCH
Confidence 3556799999999753
No 220
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.69 E-value=4.2 Score=21.34 Aligned_cols=16 Identities=31% Similarity=0.571 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eoz_A 10 EKPYSCNVCGKAFVLS 25 (46)
T ss_dssp CCSEEETTTTEEESSH
T ss_pred CCCeECcccChhhCCH
Confidence 3556799999999753
No 221
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.62 E-value=4.2 Score=21.34 Aligned_cols=16 Identities=38% Similarity=0.594 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em4_A 10 QRPYECIECGKAFKTK 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 3556799999999753
No 222
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.56 E-value=4.2 Score=21.28 Aligned_cols=16 Identities=25% Similarity=0.378 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2emp_A 10 VKPYMCNECGKAFSVY 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCeECCCCCchhCCH
Confidence 3556799999999753
No 223
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=48.54 E-value=5.4 Score=22.32 Aligned_cols=15 Identities=20% Similarity=0.250 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.++-.|.+|.|+|.-
T Consensus 6 ekp~~C~~CgK~F~~ 20 (36)
T 1fv5_A 6 PARFMCLPCGIAFSS 20 (36)
T ss_dssp CCCCEETTTTEECSC
T ss_pred ccCeECCCCCCccCC
Confidence 356789999999974
No 224
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=48.53 E-value=5.7 Score=30.39 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=23.2
Q ss_pred ccccccccchHHHHHHHhhcccccccc
Q psy15639 74 QNSTDSLLDVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 74 q~stds~l~vpvlealqrrhsd~klg~ 100 (135)
+.--|-++-.|++.+|++++++++|..
T Consensus 17 ~~lGD~i~~~P~l~~L~~~~P~a~I~~ 43 (349)
T 3tov_A 17 MHLGDVILTTPFLEVLRKAAPHSHITY 43 (349)
T ss_dssp CCHHHHHTTHHHHHHHHHHCTTSEEEE
T ss_pred CcccHHHHHHHHHHHHHHHCCCCEEEE
Confidence 344678899999999999999999875
No 225
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=4.3 Score=21.22 Aligned_cols=15 Identities=27% Similarity=0.518 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQ 24 (46)
T ss_dssp SCSEECSSSCCEESS
T ss_pred CCCEeCCcCCCccCC
Confidence 455679999999975
No 226
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.37 E-value=4.2 Score=20.76 Aligned_cols=15 Identities=40% Similarity=0.806 Sum_probs=11.3
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 8 ~k~~~C~~C~k~f~~ 22 (41)
T 2ept_A 8 QRVYECQECGKSFRQ 22 (41)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCCCCCCcCC
Confidence 345679999999864
No 227
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.34 E-value=4.2 Score=21.16 Aligned_cols=16 Identities=25% Similarity=0.412 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 10 EKPCKCTECGKAFCWK 25 (46)
T ss_dssp CCSEECSSSCCEESSS
T ss_pred CCCeeCCCCCCccCCH
Confidence 3556799999999754
No 228
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.20 E-value=4.2 Score=21.16 Aligned_cols=15 Identities=27% Similarity=0.514 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 10 EKPYRCGECGKAFAQ 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCeECCCCCCccCC
Confidence 355679999999875
No 229
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.14 E-value=4.4 Score=21.19 Aligned_cols=15 Identities=33% Similarity=0.616 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (45)
T 2epu_A 10 QKPFECTHCGKSFRA 24 (45)
T ss_dssp CCSEEETTTTEEESS
T ss_pred CcCccCCCCCCccCC
Confidence 355679999999975
No 230
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=48.13 E-value=8.9 Score=21.94 Aligned_cols=47 Identities=23% Similarity=0.515 Sum_probs=28.4
Q ss_pred CCCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 5 KPAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 5 kp~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
....+.-.|.+|.|.|.-...... .+++= .....+.|.+|.+....+
T Consensus 12 ~~~~~~~~C~~C~k~f~~~~~l~~----H~~~H------------~~~~~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 12 THSDKPYKCDRCQASFRYKGNLAS----HKTVH------------TGEKPYRCNICGAQFNRP 58 (74)
T ss_dssp CCCCCSBCCTTSSCCBSCHHHHHH----HHHHH------------CCCCSEECTTTCCEESCH
T ss_pred cCCCCCeECCCCCceeCCHHHHHH----HHHHc------------CCCCCEECCCCCchhCCH
Confidence 345567789999999975432211 11110 123469999999876544
No 231
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=47.93 E-value=4.3 Score=21.12 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCceECCCCCchhCCH
Confidence 4556799999999754
No 232
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.84 E-value=4.4 Score=21.18 Aligned_cols=15 Identities=33% Similarity=0.654 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eml_A 10 EKPYECSVCGKAFSH 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCCCcCCccCC
Confidence 355679999999975
No 233
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=47.82 E-value=3.2 Score=29.62 Aligned_cols=14 Identities=29% Similarity=0.570 Sum_probs=11.0
Q ss_pred CCchhhccccCCCC
Q psy15639 11 GNCRVCLKSFKPDD 24 (135)
Q Consensus 11 g~CRVClKsfkP~e 24 (135)
.-|+.|+.-|..++
T Consensus 71 ~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 71 FKCRNCNYEWKLKE 84 (139)
T ss_dssp EEETTTCCEEEGGG
T ss_pred EECCCCCCEEeccc
Confidence 45888888888877
No 234
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.71 E-value=4.4 Score=21.26 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 10 GKHFECTECGKAFTRK 25 (46)
T ss_dssp SCCEECSSSCCEESCH
T ss_pred CCCeECCCCCchhCCH
Confidence 3556799999999753
No 235
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.59 E-value=4.5 Score=21.16 Aligned_cols=17 Identities=24% Similarity=0.511 Sum_probs=12.8
Q ss_pred CCCCCchhhccccCCCC
Q psy15639 8 ARLGNCRVCLKSFKPDD 24 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e 24 (135)
.+.-.|.+|.|+|.-..
T Consensus 10 ~k~~~C~~C~k~f~~~~ 26 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQNS 26 (46)
T ss_dssp CSSEECSSSCCEESSSH
T ss_pred CCCeECCcCCchhCCHH
Confidence 45578999999997543
No 236
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=47.58 E-value=6.3 Score=23.06 Aligned_cols=46 Identities=26% Similarity=0.694 Sum_probs=28.5
Q ss_pred CchhhccccCCCCccchhhhhhhhhhccccc--ccCCCCCCCCCceeehhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCAS--YSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS--YSkl~~~ed~~~WrCSvCRR 62 (135)
.|.||+++=.+ +..-.|+.|..-.=-.|.. ..+.+ ...|.|..|..
T Consensus 2 ~C~vC~~~~~~-~~ll~Cd~C~~~~H~~Cl~p~l~~~P----~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGED-DKLILCDECNKAFHLFCLRPALYEVP----DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCC-SCCEECTTTCCEECHHHHCTTCCSCC----SSCCSCTTTSC
T ss_pred CCCCCCCCCCC-CCEEECCCCChhhCcccCCCCcCCCC----CCcEECcCccc
Confidence 58999987543 3456688776544444552 22222 35899999964
No 237
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=47.41 E-value=4 Score=28.70 Aligned_cols=48 Identities=17% Similarity=0.294 Sum_probs=0.0
Q ss_pred CCchhhccccCCC--------------CccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 11 GNCRVCLKSFKPD--------------DYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 11 g~CRVClKsfkP~--------------e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
..|-||+..|.-. +...+-..|.|..+.+|..---.. .-.|.+||+..
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~------~~~CP~Cr~~~ 110 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT------RQVCPLDNREW 110 (117)
T ss_dssp --------------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc------CCcCCCCCCee
Confidence 6899999988631 111222368899999996432111 23699999874
No 238
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.39 E-value=4.5 Score=21.13 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytj_A 10 EKPYICAECGKAFTIR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCChhhCCH
Confidence 3556799999999753
No 239
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.15 E-value=4.6 Score=21.09 Aligned_cols=16 Identities=25% Similarity=0.540 Sum_probs=12.3
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2en6_A 10 EKPYGCNECGKTFSQK 25 (46)
T ss_dssp SCCEEETTTTEEESSH
T ss_pred CcCeECCCCCcccCch
Confidence 4556799999999754
No 240
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.85 E-value=4.7 Score=21.06 Aligned_cols=16 Identities=19% Similarity=0.519 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ysp_A 10 EKPYKCEKCGKGYNSK 25 (46)
T ss_dssp CCSEEETTTTEEESCH
T ss_pred CCCeECCCCCCccCCH
Confidence 4567899999999753
No 241
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.71 E-value=4.6 Score=20.99 Aligned_cols=15 Identities=40% Similarity=0.642 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 10 ERPHKCNECGKSFIQ 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCCCCChhhCC
Confidence 355679999999975
No 242
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.61 E-value=4.7 Score=21.16 Aligned_cols=15 Identities=20% Similarity=0.572 Sum_probs=11.7
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2em5_A 10 TKSHQCHECGRGFTL 24 (46)
T ss_dssp SCSEECSSSCCEESS
T ss_pred CCCeECCcCCCccCC
Confidence 355679999999975
No 243
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=46.60 E-value=7 Score=18.55 Aligned_cols=12 Identities=33% Similarity=0.531 Sum_probs=8.6
Q ss_pred CCch--hhccccCC
Q psy15639 11 GNCR--VCLKSFKP 22 (135)
Q Consensus 11 g~CR--VClKsfkP 22 (135)
-.|. +|.|+|.-
T Consensus 3 ~~C~~~~C~k~f~~ 16 (31)
T 1sp2_A 3 FMCTWSYCGKRFTR 16 (31)
T ss_dssp CBCCSTTCCCBCSS
T ss_pred cCCcCCCCCcccCC
Confidence 4576 88888863
No 244
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.18 E-value=4.9 Score=20.99 Aligned_cols=16 Identities=25% Similarity=0.567 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ene_A 10 EKPYKCNECGKVFRHN 25 (46)
T ss_dssp SSSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCh
Confidence 3556799999999753
No 245
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.09 E-value=4.9 Score=21.10 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2em8_A 10 EKPYKCVECGKGYKR 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeECcccCchhCC
Confidence 456679999999975
No 246
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.06 E-value=4.8 Score=21.02 Aligned_cols=15 Identities=33% Similarity=0.682 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|+-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 10 EKPYECSICGKSFTK 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCcCCCCCCcccCC
Confidence 455679999999875
No 247
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.98 E-value=4.8 Score=21.01 Aligned_cols=16 Identities=19% Similarity=0.364 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2en3_A 10 EKPFQCKECGMNFSWS 25 (46)
T ss_dssp CCSEECSSSCCEESSS
T ss_pred CCCeeCcccChhhCCH
Confidence 3456799999999754
No 248
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.94 E-value=4.8 Score=21.11 Aligned_cols=15 Identities=27% Similarity=0.516 Sum_probs=11.6
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|+|.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2yto_A 10 EKPYKCSDCGKAFTR 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCEECcccCCccCC
Confidence 355679999999874
No 249
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=45.91 E-value=6.5 Score=20.47 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=12.4
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..+.-.|.+|.|+|+-
T Consensus 7 ~~k~~~C~~C~k~f~~ 22 (45)
T 2epq_A 7 GEKPYSCPVCGLRFKR 22 (45)
T ss_dssp SCCSSEETTTTEECSC
T ss_pred CCCCCcCCCCCcccCC
Confidence 3456789999999974
No 250
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.66 E-value=4.9 Score=20.88 Aligned_cols=16 Identities=25% Similarity=0.413 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.++-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCChhhCCH
Confidence 3557799999999753
No 251
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=45.50 E-value=6 Score=28.89 Aligned_cols=25 Identities=24% Similarity=0.284 Sum_probs=21.7
Q ss_pred ccccccchHHHHHHHhhcccccccc
Q psy15639 76 STDSLLDVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 76 stds~l~vpvlealqrrhsd~klg~ 100 (135)
.-|-++-.|++.+|++++++++|.-
T Consensus 11 iGD~i~~~p~l~~Lk~~~P~a~I~~ 35 (326)
T 2gt1_A 11 MGDVLHTLPALTDAQQAIPGIKFDW 35 (326)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cchHHhHHHHHHHHHHhCCCCEEEE
Confidence 4577788999999999999999865
No 252
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=45.22 E-value=7.1 Score=20.97 Aligned_cols=42 Identities=19% Similarity=0.517 Sum_probs=23.4
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
+.-.|.+|.|+|.-......= +++- .....|.|.+|.+....
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H----~~~h------------~~~~~~~C~~C~~~f~~ 44 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIH----LRTH------------TGEKPYKCEFCEYAAAQ 44 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHH----HHHH------------HCCCCEECSSSSCEESS
T ss_pred CCccCCCCcchhCChHHHHHH----HHHc------------CCCCCcCCCCCcchhCC
Confidence 456799999999754432211 1110 11345889999876544
No 253
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=45.20 E-value=6.1 Score=23.05 Aligned_cols=11 Identities=36% Similarity=1.144 Sum_probs=8.0
Q ss_pred CCCceeehhhh
Q psy15639 51 DENTWRCSICR 61 (135)
Q Consensus 51 d~~~WrCSvCR 61 (135)
+...|.|++|-
T Consensus 4 ~~g~W~C~~C~ 14 (33)
T 3gj3_B 4 GSGTWDCDTCL 14 (33)
T ss_dssp --CCEECTTTC
T ss_pred CCCceeCCccc
Confidence 46789999994
No 254
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=45.18 E-value=7.9 Score=21.29 Aligned_cols=12 Identities=17% Similarity=0.310 Sum_probs=6.7
Q ss_pred CCCchhhccccC
Q psy15639 10 LGNCRVCLKSFK 21 (135)
Q Consensus 10 ~g~CRVClKsfk 21 (135)
.-.|.+|.|+|.
T Consensus 41 ~~~C~~C~k~F~ 52 (54)
T 2eps_A 41 PHKCQVWVSGPS 52 (54)
T ss_dssp CCCSSSSCCSSC
T ss_pred CccCCCCCCCCC
Confidence 345666666654
No 255
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.14 E-value=5.1 Score=21.03 Aligned_cols=16 Identities=25% Similarity=0.654 Sum_probs=12.1
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em2_A 10 EKPFKCKECGKAFRQN 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCEECCcCCchhCCH
Confidence 3556799999999753
No 256
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.03 E-value=5.1 Score=20.92 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ep3_A 10 EKPYRCAECGKAFTDR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 3456799999998753
No 257
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=45.00 E-value=6.9 Score=24.42 Aligned_cols=13 Identities=23% Similarity=0.951 Sum_probs=10.6
Q ss_pred CCCCceeehhhhh
Q psy15639 50 QDENTWRCSICRR 62 (135)
Q Consensus 50 ed~~~WrCSvCRR 62 (135)
+-+..|+|.+|+.
T Consensus 32 ~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 32 DLPDDWACPVCGA 44 (52)
T ss_dssp SSCTTCCCSSSCC
T ss_pred HCCCCCcCCCCCC
Confidence 4478999999985
No 258
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.91 E-value=5.1 Score=20.90 Aligned_cols=16 Identities=38% Similarity=0.698 Sum_probs=12.2
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRYG 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCcccCcccCCh
Confidence 4556799999999753
No 259
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=44.84 E-value=10 Score=25.20 Aligned_cols=50 Identities=24% Similarity=0.527 Sum_probs=28.3
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
.|.||.+.-.+ +.--.|+.|....=..|..-. +.+ -....|.|..|....
T Consensus 56 ~C~~C~~~~~~-~~ll~Cd~C~~~yH~~Cl~pp-l~~-~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGED-SKMLVCDTCDKGYHTFCLQPV-MKS-VPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCC-TTEEECSSSCCEEEGGGSSSC-CSS-CCSSCCCCHHHHCCS
T ss_pred cccccCccCCC-CCeeECCCCCcHHhHHhcCCc-ccc-CCCCCcCCcCCcCcC
Confidence 46677766443 345567777655555555421 111 123579999997653
No 260
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=44.75 E-value=5.2 Score=20.89 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|+-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 10 EKRYKCNECGKVFSRN 25 (46)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CcCcCCCCCcchhCCH
Confidence 3556799999998753
No 261
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=44.53 E-value=7.6 Score=25.05 Aligned_cols=52 Identities=15% Similarity=0.395 Sum_probs=31.8
Q ss_pred CCCCchhhccccCCCCccchhhh--hh-hhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYE--CH-QKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~e--Cq-qkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
-...| ||++..- .+---|.. |. +-.=-.|......+ ...|.|..|+++...|
T Consensus 15 ~~~~C-~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~~p----~g~w~Cp~C~~~~~k~ 69 (71)
T 1wen_A 15 EPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP----RGKWFCPRCSQESGPS 69 (71)
T ss_dssp SCCCS-TTCCCSC--SSEECCSCSSCSCCCEETTTTTCSSCC----SSCCCCTTTSSCSSSC
T ss_pred CCCEE-ECCCCCC--CCEeEeeCCCCCCccEecccCCcCcCC----CCCEECCCCCcccccc
Confidence 34568 8988642 34555666 55 33333555555443 3579999998876544
No 262
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=44.48 E-value=6.3 Score=23.22 Aligned_cols=11 Identities=27% Similarity=1.217 Sum_probs=7.9
Q ss_pred CCCceeehhhh
Q psy15639 51 DENTWRCSICR 61 (135)
Q Consensus 51 d~~~WrCSvCR 61 (135)
+..+|.|++|=
T Consensus 4 ~~G~W~C~~C~ 14 (34)
T 3gj5_B 4 GSGSWDCEVCL 14 (34)
T ss_dssp --CCEECTTTC
T ss_pred CCCceECCeeE
Confidence 46799999993
No 263
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=44.33 E-value=6.4 Score=28.59 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=21.7
Q ss_pred cccccchHHHHHHHhhcccccccc
Q psy15639 77 TDSLLDVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 77 tds~l~vpvlealqrrhsd~klg~ 100 (135)
-|-++-.|++.+|++++++++|-.
T Consensus 12 GD~i~~~p~l~~Lk~~~P~~~i~~ 35 (348)
T 1psw_A 12 GDMMMSQSLYRTLQARYPQAIIDV 35 (348)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEE
Confidence 677899999999999999999865
No 264
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.30 E-value=5.6 Score=20.74 Aligned_cols=16 Identities=25% Similarity=0.524 Sum_probs=12.0
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytd_A 10 EKPYKCSECGKAFHRH 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCCCCCeeCCh
Confidence 3556799999999753
No 265
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=43.13 E-value=4.7 Score=18.44 Aligned_cols=12 Identities=33% Similarity=0.634 Sum_probs=8.5
Q ss_pred CCch--hhccccCC
Q psy15639 11 GNCR--VCLKSFKP 22 (135)
Q Consensus 11 g~CR--VClKsfkP 22 (135)
-.|. +|.|+|+-
T Consensus 3 ~~C~~~~C~k~f~~ 16 (29)
T 2ab3_A 3 YVCHFENCGRSFND 16 (29)
T ss_dssp EEECSTTTCEEESS
T ss_pred CCCcCCcCcCccCC
Confidence 3577 88888863
No 266
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=43.01 E-value=8.9 Score=23.85 Aligned_cols=46 Identities=17% Similarity=0.468 Sum_probs=28.2
Q ss_pred CCchhhccccCCCCccchhhh--hh-hhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYE--CH-QKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~e--Cq-qkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
.-| ||++..- ..---|+. |. +-.=-.|...+..+. ..|.|..|++|
T Consensus 10 ~yC-~C~~~~~--g~mi~CD~~~C~~~wfH~~Cvgl~~~p~----~~w~Cp~C~~~ 58 (59)
T 3c6w_A 10 TYC-LCHQVSY--GEMIGCDNPDCPIEWFHFACVDLTTKPK----GKWFCPRCVQE 58 (59)
T ss_dssp EET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCCS----SCCCCHHHHCC
T ss_pred cEE-ECCCCCC--CCeeEeeCCCCCCCCEecccCCcccCCC----CCEECcCccCc
Confidence 456 8988642 34455666 54 233335666555443 57999999875
No 267
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=42.85 E-value=5.7 Score=20.80 Aligned_cols=16 Identities=31% Similarity=0.517 Sum_probs=11.9
Q ss_pred CCCCCchhhccccCCC
Q psy15639 8 ARLGNCRVCLKSFKPD 23 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~ 23 (135)
.+.-.|.+|.|+|.-.
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el6_A 10 VNPYKCSQCEKSFSGK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCCeECCCCCcccCCH
Confidence 3556799999998753
No 268
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.81 E-value=14 Score=21.23 Aligned_cols=46 Identities=24% Similarity=0.506 Sum_probs=27.0
Q ss_pred CCCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 6 PAARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 6 p~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
...+.-.|.+|.|.|.-...... .+++ ......+.|.+|.+....+
T Consensus 14 ~~~~~~~C~~C~~~f~~~~~l~~----H~~~------------h~~~~~~~C~~C~~~f~~~ 59 (77)
T 2cot_A 14 RERRRYKCDECGKSFSHSSDLSK----HRRT------------HTGEKPYKCDECGKAFIQR 59 (77)
T ss_dssp CCSCSSBCSSSCCBCSCHHHHHH----HHTT------------TCCSCSEECSSSCCEESSH
T ss_pred CCCCCEECCCCCcccCCHHHHHH----HHHH------------cCCCcCeeCCCCCCccCCH
Confidence 34566789999999974332111 1111 1123569999998766543
No 269
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=42.69 E-value=8.8 Score=18.21 Aligned_cols=14 Identities=29% Similarity=0.498 Sum_probs=10.1
Q ss_pred CCCch--hhccccCCC
Q psy15639 10 LGNCR--VCLKSFKPD 23 (135)
Q Consensus 10 ~g~CR--VClKsfkP~ 23 (135)
+-.|. +|.|+|.-.
T Consensus 3 ~~~C~~~~C~k~f~~~ 18 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRN 18 (32)
T ss_dssp SBCCCCTTCCCCBSSS
T ss_pred CCcCcCCCCCCccCCH
Confidence 45688 899988643
No 270
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=42.61 E-value=7.1 Score=24.44 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=22.1
Q ss_pred hhcccccccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 36 VCEDCASYSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 36 VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
+|.+|-+.. +..+.....+.|..|+.-+..+.
T Consensus 13 ~Cp~C~~~~-lv~D~~~ge~vC~~CGlVl~e~~ 44 (58)
T 1dl6_A 13 TCPNHPDAI-LVEDYRAGDMICPECGLVVGDRV 44 (58)
T ss_dssp SBTTBSSSC-CEECSSSCCEECTTTCCEECCSC
T ss_pred cCcCCCCCc-eeEeCCCCeEEeCCCCCEEeccc
Confidence 466665533 55555677899999988877665
No 271
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=41.98 E-value=9.5 Score=20.74 Aligned_cols=42 Identities=24% Similarity=0.634 Sum_probs=24.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
+-.|.+|.|+|.-...... .+++ ......+.|.+|.+...++
T Consensus 2 ~~~C~~C~~~f~~~~~l~~----H~~~------------h~~~~~~~C~~C~~~f~~~ 43 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKR----HYRS------------HTNEKPYPCGLCNRAFTRR 43 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHH----HHHT------------TTSSCSEECTTTCCEESSH
T ss_pred cCcCCCCccccCCHHHHHH----HHHH------------hCCCCCccCCCCCCccCCH
Confidence 4578999999874332211 1111 1123569999999876544
No 272
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=40.63 E-value=7.5 Score=21.30 Aligned_cols=14 Identities=14% Similarity=0.655 Sum_probs=10.6
Q ss_pred CCCCchhhccccCC
Q psy15639 9 RLGNCRVCLKSFKP 22 (135)
Q Consensus 9 r~g~CRVClKsfkP 22 (135)
+.-.|.+|.|+|.-
T Consensus 23 k~~~C~~C~k~f~~ 36 (54)
T 1yui_A 23 QPATCPICYAVIRQ 36 (54)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCccCCCCCcccCC
Confidence 44579999998864
No 273
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=40.06 E-value=2.1 Score=36.15 Aligned_cols=37 Identities=19% Similarity=0.552 Sum_probs=28.7
Q ss_pred chhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 27 RVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 27 ~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
-.-..|.|.-|-|=.+|-.. ++....|+|.||.+.+.
T Consensus 263 vRg~~C~HlQCFDl~sfL~~--~~~~~~W~CPIC~k~~~ 299 (371)
T 3i2d_A 263 SKSINCKHLQCFDALWFLHS--QLQIPTWQCPVCQIDIA 299 (371)
T ss_dssp EEETTCCSSCCEEHHHHHHH--HHHSCCCBCTTTCCBCC
T ss_pred CcCCcCCCcceECHHHHHHH--hhcCCceeCCCCCcccC
Confidence 33467999999999998654 34578999999987654
No 274
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.99 E-value=10 Score=24.90 Aligned_cols=8 Identities=38% Similarity=1.448 Sum_probs=6.5
Q ss_pred ceeehhhh
Q psy15639 54 TWRCSICR 61 (135)
Q Consensus 54 ~WrCSvCR 61 (135)
.|.|..|.
T Consensus 68 ~W~C~~C~ 75 (77)
T 2e6s_A 68 YWYCPSCK 75 (77)
T ss_dssp CCCCTTTC
T ss_pred CcCCcCcc
Confidence 79888885
No 275
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=39.55 E-value=3.8 Score=34.79 Aligned_cols=52 Identities=13% Similarity=0.381 Sum_probs=38.1
Q ss_pred hhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 15 VCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 15 VClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
+|++...++++---|..|+.-.=.+|...+.... ++...|.|..|+++...+
T Consensus 9 iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~-~~~~~y~C~~C~~~~~~~ 60 (447)
T 3kv4_A 9 LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKA-ADIDLYHCPNCEVLHGPS 60 (447)
T ss_dssp TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHH-TTEEECCCHHHHHHHCCC
T ss_pred eCCCcCCCCCCeEEcCCCCcccccccCCcCcccc-cCCCEEECCCCccccCCc
Confidence 8999888888888888887665567777654321 234789999999876543
No 276
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=38.96 E-value=12 Score=29.61 Aligned_cols=9 Identities=44% Similarity=1.405 Sum_probs=7.2
Q ss_pred ceeehhhhh
Q psy15639 54 TWRCSICRR 62 (135)
Q Consensus 54 ~WrCSvCRR 62 (135)
.|.|..|..
T Consensus 216 ~W~Cp~C~~ 224 (226)
T 3ask_A 216 EWYCPECRN 224 (226)
T ss_dssp CCCCGGGC-
T ss_pred CCCCcCCcC
Confidence 799999964
No 277
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=38.56 E-value=8.8 Score=25.29 Aligned_cols=15 Identities=20% Similarity=0.601 Sum_probs=11.7
Q ss_pred CCCCCceeehhhhhh
Q psy15639 49 NQDENTWRCSICRRK 63 (135)
Q Consensus 49 ~ed~~~WrCSvCRRK 63 (135)
.+-+..|+|.+|+..
T Consensus 35 ~~lPddw~CP~Cga~ 49 (70)
T 1dx8_A 35 VDLSDSFMCPACRSP 49 (70)
T ss_dssp GGSCTTCBCTTTCCB
T ss_pred hhCCCCCcCCCCCCC
Confidence 445778999999864
No 278
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=37.18 E-value=13 Score=23.00 Aligned_cols=47 Identities=17% Similarity=0.454 Sum_probs=27.7
Q ss_pred CCCchhhccccCCCCccchhhh--hh-hhhhcccccccCCCCCCCCCceeehhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYE--CH-QKVCEDCASYSKLDENQDENTWRCSICRRK 63 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~e--Cq-qkVCEDCASYSkl~~~ed~~~WrCSvCRRK 63 (135)
...| ||++.-. ..---|.. |. +-.=-.|...+..+ ...|.|..|.+|
T Consensus 10 ~~~C-~C~~~~~--g~mi~CD~cdC~~~wfH~~Cvgl~~~p----~g~w~C~~C~~~ 59 (60)
T 2vnf_A 10 PTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP----RGKWFCPRCSQE 59 (60)
T ss_dssp CEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC----SSCCCCHHHHC-
T ss_pred CCEE-ECCCcCC--CCEEEeCCCCCCCceEehhcCCCCcCC----CCCEECcCccCc
Confidence 3457 8988632 34555666 43 22333455555443 367999999875
No 279
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=36.84 E-value=8 Score=23.29 Aligned_cols=43 Identities=16% Similarity=0.370 Sum_probs=24.0
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
|+-.|.+|.|+|.-..-.. =.+++ ......+.|.+|++....+
T Consensus 3 Kpy~C~~C~k~F~~~~~L~----~H~~~------------Ht~ekp~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLS----RHRRA------------HLGYRPRSCPECGKCFRDQ 45 (60)
T ss_dssp CCEECTTTCCEESSHHHHH----HHHHH------------HHTCCCEECTTTCCEESSH
T ss_pred CCccCCCCCCEeCCHHHHH----HHHHH------------hCCCcCeECCCCCCCcCCH
Confidence 4567999999996432211 11111 1124568888888765443
No 280
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=35.92 E-value=2.4 Score=35.56 Aligned_cols=34 Identities=32% Similarity=0.807 Sum_probs=27.9
Q ss_pred hhhhhhhhcccccccCCCCCCCCCceeehhhhhhhh
Q psy15639 30 YECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQ 65 (135)
Q Consensus 30 ~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~ 65 (135)
..|.|.-|-|=.+|=...+ ...+|+|.||.+.+.
T Consensus 232 ~~C~HlqCFDl~sfL~~~~--~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 232 VTCTHLQCFDAALYLQMNE--KKPTWICPVCDKKAA 265 (360)
T ss_dssp TTCCCCCCEEHHHHHHHHH--HSCCCBCTTTCSBCC
T ss_pred CCCCCCccCCHHHHHHHHh--hCCCeECCCCCcccC
Confidence 5799999999999976553 467999999998764
No 281
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=35.82 E-value=22 Score=24.34 Aligned_cols=47 Identities=30% Similarity=0.731 Sum_probs=29.4
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccc--cccCCCCCCCCCceeehhhhh
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCA--SYSKLDENQDENTWRCSICRR 62 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCA--SYSkl~~~ed~~~WrCSvCRR 62 (135)
.-...|.||+++ ++ --.|+.|..-.=-.|- ..... ....|.|..|..
T Consensus 23 ~n~~~C~vC~~~---g~-LL~CD~C~~~fH~~Cl~PpL~~~----P~g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKP---GD-LVMCNQCEFCFHLDCHLPALQDV----PGEEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSS---SC-CEECTTSSCEECTTSSSTTCCCC----CSSSCCCCSCCC
T ss_pred CCCCcCcCcCCC---CC-EEECCCCCCceecccCCCCCCCC----cCCCcCCccccC
Confidence 345679999975 44 3457777655445554 22222 246899999974
No 282
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.54 E-value=22 Score=22.15 Aligned_cols=16 Identities=31% Similarity=0.561 Sum_probs=11.7
Q ss_pred CCCCCCchhhccccCC
Q psy15639 7 AARLGNCRVCLKSFKP 22 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP 22 (135)
..++-.|.+|.|+|.-
T Consensus 10 ~ekpy~C~~CgK~F~~ 25 (66)
T 2epp_A 10 EAGILPCGLCGKVFTD 25 (66)
T ss_dssp CCCCCCCTTTCCCCSC
T ss_pred CccCcCCCCCCCccCC
Confidence 3456678888888874
No 283
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=34.62 E-value=6.5 Score=31.92 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=36.9
Q ss_pred CCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehh--hhhhhhccc
Q psy15639 9 RLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSI--CRRKLQSRA 68 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSv--CRRK~~sr~ 68 (135)
..-.|.||+.-|+ ++-. -..|.|-.|-.|-.-.-. . ...|+|.| |+..+..+.
T Consensus 180 ~el~CPIcl~~f~--DPVt-s~~CGHsFcR~cI~~~~~-~---~~~~~CPvtGCr~~l~~~d 234 (267)
T 3htk_C 180 IELTCPITCKPYE--APLI-SRKCNHVFDRDGIQNYLQ-G---YTTRDCPQAACSQVVSMRD 234 (267)
T ss_dssp CCSBCTTTSSBCS--SEEE-ESSSCCEEEHHHHHHHST-T---CSCEECSGGGCSCEECGGG
T ss_pred eeeECcCccCccc--CCee-eCCCCCcccHHHHHHHHH-h---CCCCCCCcccccCcCchhh
Confidence 4457999999994 4433 246888888888642211 1 25699999 999887665
No 284
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=33.38 E-value=11 Score=21.26 Aligned_cols=14 Identities=29% Similarity=0.562 Sum_probs=7.8
Q ss_pred CCCCCCch--hhcccc
Q psy15639 7 AARLGNCR--VCLKSF 20 (135)
Q Consensus 7 ~~r~g~CR--VClKsf 20 (135)
..+.-.|. +|.|+|
T Consensus 16 ~~~~~~C~~~~C~k~f 31 (73)
T 1f2i_G 16 KMRPYACPVESCDRRF 31 (73)
T ss_dssp CCCCEECSSTTBCCEE
T ss_pred CCCccCCcCCCCCCcc
Confidence 34455665 366666
No 285
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.82 E-value=12 Score=21.59 Aligned_cols=46 Identities=11% Similarity=0.380 Sum_probs=26.6
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.+.-.|.+|.|.|.-......= .+ ..+.++...+.|.+|.+.....
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H----~~----------~~h~~~~~~~~C~~C~~~f~~~ 58 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMH----IL----------QKHTENVAKFHCPHCDTVIARK 58 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHH----HH----------HHSSSSCSSEECSSSSCEESSH
T ss_pred CCCeECCCcCchhCCHHHHHHH----HH----------HhcCCCCCccCCCCCCCccCCH
Confidence 3556799999999754332211 00 0112223579999998765443
No 286
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.30 E-value=14 Score=20.86 Aligned_cols=45 Identities=16% Similarity=0.473 Sum_probs=26.4
Q ss_pred CCCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 7 AARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
..+.-.|.+|.|.|.-...... .+++ ......+.|.+|.+....+
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~~----H~~~------------H~~~~~~~C~~C~~~f~~~ 50 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALRI----HERI------------HCTDRPFKCNYCSFDTKQP 50 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHHH----HHGG------------GCCSCSEECSSSSCEESSH
T ss_pred CCCCeECCCCCcccCCHHHHHH----HHHH------------cCCCCCEeCCCCCCccCCH
Confidence 4566789999999874332211 1111 1123459999998866544
No 287
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=32.07 E-value=29 Score=21.17 Aligned_cols=16 Identities=13% Similarity=0.335 Sum_probs=10.7
Q ss_pred HHHHHHHhhccccccc
Q psy15639 84 PVLEALQRRHSDVKIG 99 (135)
Q Consensus 84 pvlealqrrhsd~klg 99 (135)
|+++.|.+.+.++.+.
T Consensus 44 p~l~~l~~~~~~~~~~ 59 (109)
T 3f3q_A 44 PMIEKFSEQYPQADFY 59 (109)
T ss_dssp HHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHCCCCEEE
Confidence 6677777777666553
No 288
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.05 E-value=18 Score=23.16 Aligned_cols=50 Identities=18% Similarity=0.480 Sum_probs=30.6
Q ss_pred CCchhhccccCCCCccchhhhhh---hhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 11 GNCRVCLKSFKPDDYSRVCYECH---QKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 11 g~CRVClKsfkP~e~~~tC~eCq---qkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
--| +|.+.. +.+---|+.|+ .-.=-+|...+..+ ...|.|..|..++..|
T Consensus 7 ~yC-~C~~~~--~g~MI~CD~cdC~~~WfH~~Cvgl~~~p----~~~w~Cp~C~~~~~k~ 59 (70)
T 1x4i_A 7 GYC-ICNQVS--YGEMVGCDNQDCPIEWFHYGCVGLTEAP----KGKWYCPQCTAAMKRR 59 (70)
T ss_dssp CCS-TTSCCC--CSSEECCSCTTCSCCCEEHHHHTCSSCC----SSCCCCHHHHHHHHHH
T ss_pred eEE-EcCCCC--CCCEeEeCCCCCCccCCcccccccCcCC----CCCEECCCCCcccccc
Confidence 456 577752 33555566653 22223567665543 5789999999887654
No 289
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=31.70 E-value=13 Score=20.62 Aligned_cols=13 Identities=31% Similarity=0.879 Sum_probs=7.8
Q ss_pred CCCCchhhccccC
Q psy15639 9 RLGNCRVCLKSFK 21 (135)
Q Consensus 9 r~g~CRVClKsfk 21 (135)
+.-.|.+|.|+|.
T Consensus 39 ~~~~C~~C~k~f~ 51 (66)
T 2drp_A 39 KVYPCPFCFKEFT 51 (66)
T ss_dssp CCEECTTTCCEES
T ss_pred cCeECCCCCCccC
Confidence 3445666666664
No 290
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=31.54 E-value=17 Score=23.24 Aligned_cols=17 Identities=18% Similarity=0.530 Sum_probs=11.7
Q ss_pred CCceeehhhhhhhhccc
Q psy15639 52 ENTWRCSICRRKLQSRA 68 (135)
Q Consensus 52 ~~~WrCSvCRRK~~sr~ 68 (135)
...+.|.+|.+....+.
T Consensus 54 ~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 54 AQVFPCKYCPATFYSSP 70 (85)
T ss_dssp SSSEECTTSSCEESSHH
T ss_pred CCccCCCCCCCEeCCHH
Confidence 34688999987765443
No 291
>2qsx_A Putative transcriptional regulator, LYSR family; the putative transcriptional regulator, PSI-2, structure initiative, MCSG; 1.64A {Vibrio parahaemolyticus}
Probab=31.29 E-value=20 Score=23.77 Aligned_cols=21 Identities=24% Similarity=0.564 Sum_probs=16.8
Q ss_pred ccchHHHHHHHhhcccccccc
Q psy15639 80 LLDVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 80 ~l~vpvlealqrrhsd~klg~ 100 (135)
.+=.|+|..++++|++++|=.
T Consensus 32 ~~L~~~l~~f~~~~P~i~l~l 52 (218)
T 2qsx_A 32 LWLVPNINDFHQRHPNIRVKI 52 (218)
T ss_dssp HTHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEE
Confidence 344689999999999987643
No 292
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.59 E-value=16 Score=23.04 Aligned_cols=9 Identities=22% Similarity=0.549 Sum_probs=4.8
Q ss_pred Cchhhcccc
Q psy15639 12 NCRVCLKSF 20 (135)
Q Consensus 12 ~CRVClKsf 20 (135)
.|.+|.|+|
T Consensus 36 ~C~~C~k~F 44 (96)
T 2ctd_A 36 SCPTCQAVG 44 (96)
T ss_dssp ECTTTCSCE
T ss_pred CCCCCCCCc
Confidence 455555555
No 293
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=29.44 E-value=16 Score=27.35 Aligned_cols=16 Identities=25% Similarity=0.542 Sum_probs=12.0
Q ss_pred CCCCceeehhhhhhhh
Q psy15639 50 QDENTWRCSICRRKLQ 65 (135)
Q Consensus 50 ed~~~WrCSvCRRK~~ 65 (135)
++...|+|.+|+--.-
T Consensus 167 ~~~~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 167 DDDKFHLCPICGYIHK 182 (202)
T ss_dssp CSCCEEECSSSCCEEE
T ss_pred CCCcEEEECCCCCEEc
Confidence 5667899999986543
No 294
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=29.26 E-value=19 Score=19.93 Aligned_cols=13 Identities=23% Similarity=0.818 Sum_probs=9.7
Q ss_pred CCCCceeehhhhh
Q psy15639 50 QDENTWRCSICRR 62 (135)
Q Consensus 50 ed~~~WrCSvCRR 62 (135)
.+...|.|+.|--
T Consensus 4 ~~~~~W~C~~CT~ 16 (34)
T 3a9j_C 4 HMGAQWNCTACTF 16 (34)
T ss_dssp BCCCCEECTTTCC
T ss_pred CCCCcCCCCCCcc
Confidence 3456899999863
No 295
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=28.78 E-value=12 Score=24.85 Aligned_cols=42 Identities=19% Similarity=0.544 Sum_probs=30.0
Q ss_pred hhcccccccCCCCCCCCCceeehhhhhhhhccccccccccccccccch
Q psy15639 36 VCEDCASYSKLDENQDENTWRCSICRRKLQSRAQPVLSQNSTDSLLDV 83 (135)
Q Consensus 36 VCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~qp~~~q~stds~l~v 83 (135)
+|. |..++-... ...+-.|. |++.++-+--+++.+ +|+.-|.
T Consensus 6 ~C~-C~~~~~~~~--~~kT~~C~-CG~~~~~~k~rif~~--~~d~~eA 47 (71)
T 1gh9_A 6 RCD-CGRALYSRE--GAKTRKCV-CGRTVNVKDRRIFGR--ADDFEEA 47 (71)
T ss_dssp EET-TSCCEEEET--TCSEEEET-TTEEEECCSSSCBSC--CSSHHHH
T ss_pred ECC-CCCEEEEcC--CCcEEECC-CCCeeeeceEEEEEe--cCCHHHH
Confidence 577 876654433 56777896 999999888888876 5555553
No 296
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=28.22 E-value=18 Score=19.30 Aligned_cols=40 Identities=18% Similarity=0.484 Sum_probs=23.1
Q ss_pred CchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 12 NCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 12 ~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.|.+|.|.|.-...... .+++ ......|.|.+|.+....+
T Consensus 3 ~C~~C~~~f~~~~~l~~----H~~~------------h~~~~~~~C~~C~~~f~~~ 42 (57)
T 1bbo_A 3 ICEECGIRXKKPSMLKK----HIRT------------HTDVRPYHCTYCNFSFKTK 42 (57)
T ss_dssp BCTTTCCBCSSHHHHHH----HHHH------------TSSCCCEECSSSSCEESSH
T ss_pred cCCCCcCcCCCHHHHHH----HHHh------------cCCCCCccCCCCCchhcCH
Confidence 58999999974332211 0111 1123569999998766543
No 297
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.90 E-value=51 Score=20.33 Aligned_cols=18 Identities=11% Similarity=0.109 Sum_probs=13.5
Q ss_pred CCCCchhhccccCCCCcc
Q psy15639 9 RLGNCRVCLKSFKPDDYS 26 (135)
Q Consensus 9 r~g~CRVClKsfkP~e~~ 26 (135)
....|..|.|.+.+.|.-
T Consensus 14 ~~~~C~~C~~~I~~~e~v 31 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERL 31 (82)
T ss_dssp SSCBCSSSCCBCCTTTBC
T ss_pred CCCCCcccCCCcccceEE
Confidence 345699999999877644
No 298
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.88 E-value=24 Score=21.57 Aligned_cols=14 Identities=14% Similarity=0.259 Sum_probs=11.5
Q ss_pred CCCCCchhhccccC
Q psy15639 8 ARLGNCRVCLKSFK 21 (135)
Q Consensus 8 ~r~g~CRVClKsfk 21 (135)
.+.-.|.+|.|.|.
T Consensus 22 ~~~~~C~~C~k~f~ 35 (98)
T 2gqj_A 22 RGEAVCPTCNVVTR 35 (98)
T ss_dssp TSCCCCTTTCCCCS
T ss_pred CCCcCCCCCCCChh
Confidence 35678999999997
No 299
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=27.88 E-value=26 Score=27.60 Aligned_cols=33 Identities=27% Similarity=0.652 Sum_probs=22.0
Q ss_pred hhccccccc-CCCCCCCCCceeehhhhhhhhccc
Q psy15639 36 VCEDCASYS-KLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 36 VCEDCASYS-kl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.|..|.+.. .+..+......-|.-|+.-+..+.
T Consensus 23 ~Cp~Cg~~~~~iv~D~~~G~~vC~~CG~Vl~e~~ 56 (345)
T 3k7a_M 23 TCPECKVYPPKIVERFSEGDVVCALCGLVLSDKL 56 (345)
T ss_dssp CCSTTCCSCCCCCCCSSSCSCCCSSSCCCCCCCC
T ss_pred cCcCCCCCCCceEEECCCCCEecCCCCeEccccc
Confidence 466666653 455556667788888888777665
No 300
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=27.47 E-value=23 Score=19.89 Aligned_cols=19 Identities=21% Similarity=0.357 Sum_probs=13.1
Q ss_pred CCCCCCCCchh--hccccCCC
Q psy15639 5 KPAARLGNCRV--CLKSFKPD 23 (135)
Q Consensus 5 kp~~r~g~CRV--ClKsfkP~ 23 (135)
....+.-.|.+ |.|.|+-.
T Consensus 12 ~~~~~~~~C~~~~C~k~f~~~ 32 (72)
T 2epa_A 12 SSRIRSHICSHPGCGKTYFKS 32 (72)
T ss_dssp CCCCCCEECSSTTTCCEESSH
T ss_pred ccccCceeCCCCCCccccCCH
Confidence 34455667888 99988743
No 301
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.27 E-value=15 Score=21.11 Aligned_cols=47 Identities=11% Similarity=0.301 Sum_probs=26.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.+.-.|.+|.|.|.-......= +++-.+ ......|.|.+|.+....+
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H----~~~h~~---------~~~~~~~~C~~C~k~f~~~ 51 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWH----QRKHAE---------TVAALRFPCEFCGKRFEKP 51 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHH----HHHHHH---------HTTTCCEECTTTCCEESSH
T ss_pred CcCeECCCCCCeeCCHHHHHHH----HHHhhc---------cCCCcccCCCCCCchhCCH
Confidence 4566799999999754332211 111000 0124569999999876544
No 302
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=27.26 E-value=14 Score=18.42 Aligned_cols=15 Identities=20% Similarity=0.543 Sum_probs=10.9
Q ss_pred CCCCCchh--hccccCC
Q psy15639 8 ARLGNCRV--CLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRV--ClKsfkP 22 (135)
.+.-.|.+ |.|+|.-
T Consensus 6 ~k~~~C~~~~C~k~f~~ 22 (37)
T 1va1_A 6 KKQHICHIQGCGKVYGK 22 (37)
T ss_dssp CCCEECCSTTCCCEESC
T ss_pred CCCCCCCCCCCCCccCC
Confidence 35567885 9999864
No 303
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=27.11 E-value=19 Score=22.95 Aligned_cols=23 Identities=17% Similarity=0.640 Sum_probs=16.8
Q ss_pred ccCCCCCCCCCceeehhhhhhhhc
Q psy15639 43 YSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 43 YSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
+|-+++-+.+.-|.|.-|. ++.+
T Consensus 2 ~~~D~di~~~D~WkC~~C~-~~N~ 24 (46)
T 2c6a_A 2 FEEDPEISLADYWKCTSCN-EMNP 24 (46)
T ss_dssp CCCCSSSCGGGCEECTTTC-CEEC
T ss_pred CccCCccCccceEeccccc-ccCC
Confidence 4556666777899999998 5543
No 304
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.56 E-value=20 Score=22.35 Aligned_cols=11 Identities=55% Similarity=1.476 Sum_probs=8.8
Q ss_pred CCCceeehhhh
Q psy15639 51 DENTWRCSICR 61 (135)
Q Consensus 51 d~~~WrCSvCR 61 (135)
+...|.|++|-
T Consensus 8 ~~~~W~C~~CT 18 (53)
T 2d9g_A 8 DEGYWDCSVCT 18 (53)
T ss_dssp CCCCEECSSSC
T ss_pred CCCCcCCCCCc
Confidence 45689999995
No 305
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=26.54 E-value=23 Score=24.66 Aligned_cols=38 Identities=18% Similarity=0.400 Sum_probs=22.7
Q ss_pred chhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceee
Q psy15639 13 CRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRC 57 (135)
Q Consensus 13 CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrC 57 (135)
|.+|.|.-. ..|..|-.-+|+||..=.- .....+.|.|
T Consensus 61 C~~C~k~~~-----~~C~~Cp~sfC~~c~~g~l--~~~~~~~~~c 98 (107)
T 4gne_A 61 CDECSSAAV-----SFCEFCPHSFCKDHEKGAL--VPSALEGRLC 98 (107)
T ss_dssp CTTTCSBCC-----EECSSSSCEECTTTCTTSC--EECTTTTCEE
T ss_pred CCcCCCCCC-----cCcCCCCcchhhhccCCcc--eecCCCCcee
Confidence 566766533 5688888888888863211 1223556765
No 306
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=26.53 E-value=29 Score=28.65 Aligned_cols=38 Identities=13% Similarity=0.336 Sum_probs=28.4
Q ss_pred CCCCCCchhhcccc-CCCCccchhhhhhhhhhccccccc
Q psy15639 7 AARLGNCRVCLKSF-KPDDYSRVCYECHQKVCEDCASYS 44 (135)
Q Consensus 7 ~~r~g~CRVClKsf-kP~e~~~tC~eCqqkVCEDCASYS 44 (135)
..++-.|-+|.+.| --.---+.|..|.-.||..|+.+-
T Consensus 526 ~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 526 FEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp CSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS
T ss_pred CCCCcccccccccccccccCCcCCCCCCCccchhhhhcC
Confidence 45677899998876 222234789999999999998874
No 307
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=26.44 E-value=29 Score=22.17 Aligned_cols=32 Identities=22% Similarity=0.688 Sum_probs=25.4
Q ss_pred CCCchhhccccCCCCccchhhhhhhhhhccccc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS 42 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS 42 (135)
.-.|.+|... +|...-+.|..|.--.|+.|.-
T Consensus 30 ~v~C~~C~~~-~~~~A~ksCl~C~~s~C~~hl~ 61 (78)
T 2ffw_A 30 KVLCQFCDQD-PAQDAVKTCVTCEVSYCDECLK 61 (78)
T ss_dssp CCBCSSCCSS-SCCBCCEEETTTTEEECHHHHH
T ss_pred CccCCcCCCC-CCCCCeeEccCccchhhhhhhH
Confidence 3579999753 4578889999999999988865
No 308
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=26.42 E-value=16 Score=23.10 Aligned_cols=14 Identities=21% Similarity=0.788 Sum_probs=11.1
Q ss_pred CCCCceeehhhhhh
Q psy15639 50 QDENTWRCSICRRK 63 (135)
Q Consensus 50 ed~~~WrCSvCRRK 63 (135)
+-+..|+|.+|+-.
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 32 DIPDDWVCPLCGVG 45 (54)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCcCCCCc
Confidence 45778999999853
No 309
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=26.27 E-value=19 Score=22.40 Aligned_cols=14 Identities=21% Similarity=0.828 Sum_probs=11.4
Q ss_pred CCCCceeehhhhhh
Q psy15639 50 QDENTWRCSICRRK 63 (135)
Q Consensus 50 ed~~~WrCSvCRRK 63 (135)
+-+..|+|.+|+..
T Consensus 31 ~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 31 DLPDDWVCPLCGAP 44 (52)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCCCCCCC
Confidence 55789999999863
No 310
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=25.98 E-value=35 Score=23.21 Aligned_cols=49 Identities=16% Similarity=0.352 Sum_probs=28.8
Q ss_pred CCCchhhccccCCCCccchhhhhh---hhhhcccccccCCCCCCCCCceeehh-hhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECH---QKVCEDCASYSKLDENQDENTWRCSI-CRRKLQ 65 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCq---qkVCEDCASYSkl~~~ed~~~WrCSv-CRRK~~ 65 (135)
.-.| ||++..- + .---|+.|+ .-.=-.|......+ ...|.|.. |++...
T Consensus 26 ~~yC-iC~~~~~-g-~MI~CD~c~C~~eWfH~~CVgl~~~p----~~~W~Cp~cC~~~~k 78 (90)
T 2jmi_A 26 EVYC-FCRNVSY-G-PMVACDNPACPFEWFHYGCVGLKQAP----KGKWYCSKDCKEIAN 78 (90)
T ss_dssp SCCS-TTTCCCS-S-SEECCCSSSCSCSCEETTTSSCSSCT----TSCCCSSHHHHHHHH
T ss_pred CcEE-EeCCCCC-C-CEEEecCCCCccccCcCccCCCCcCC----CCCccCChhhcchhh
Confidence 3468 8987432 3 345577655 33333566655433 25899999 985443
No 311
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=25.42 E-value=34 Score=19.90 Aligned_cols=30 Identities=23% Similarity=0.572 Sum_probs=13.8
Q ss_pred hhcccccccCCCCCCCCCceeehhhhhhhhc
Q psy15639 36 VCEDCASYSKLDENQDENTWRCSICRRKLQS 66 (135)
Q Consensus 36 VCEDCASYSkl~~~ed~~~WrCSvCRRK~~s 66 (135)
+|..|-+ ..+..+.+...+.|..|+.-+..
T Consensus 7 ~CP~C~~-~~l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 7 VCPACES-AELIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp SCTTTSC-CCEEEETTTTEEEESSSCCBCCC
T ss_pred eCcCCCC-cceEEcCCCCeEECcccCCcccc
Confidence 4444433 12333334455666666554443
No 312
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=24.41 E-value=30 Score=21.61 Aligned_cols=48 Identities=21% Similarity=0.442 Sum_probs=28.7
Q ss_pred CCCchhhccccCCCCccchhhh--hh-hhhhcccccccCCCCCCCCCceeehhhhhhh
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYE--CH-QKVCEDCASYSKLDENQDENTWRCSICRRKL 64 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~e--Cq-qkVCEDCASYSkl~~~ed~~~WrCSvCRRK~ 64 (135)
..-| ||++..- .+---|+. |. .-.=-.|...+..+ ...|.|..|+++.
T Consensus 11 ~~yC-~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~p----~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 11 PTYC-LCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYKP----KGKWYCPKCRGDN 61 (62)
T ss_dssp CEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC----SSCCCCHHHHTCC
T ss_pred CcEE-ECCCCCC--CCeeeeeCCCCCcccEecccCCcCcCC----CCCEECcCcccCC
Confidence 3457 8988632 23445666 43 33333566665443 4689999998753
No 313
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.84 E-value=18 Score=20.53 Aligned_cols=44 Identities=23% Similarity=0.503 Sum_probs=25.8
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhcccccccCCCCCCCCCceeehhhhhhhhcc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCASYSKLDENQDENTWRCSICRRKLQSR 67 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr 67 (135)
.+.-.|.+|.|.|.-...... .+++ ......+.|.+|.+....+
T Consensus 12 ~k~~~C~~C~k~f~~~~~L~~----H~~~------------h~~~~~~~C~~C~~~f~~~ 55 (72)
T 1x6e_A 12 EKPYGCVECGKAFSRSSILVQ----HQRV------------HTGEKPYKCLECGKAFSQN 55 (72)
T ss_dssp CCCEECSSSCCEESSHHHHHH----HHHG------------GGCSCCEECSSSCCEESSH
T ss_pred CCCccCCCCCCccCCHHHHHH----HHHh------------cCCCCCeECCCCCcccCCH
Confidence 355679999999975433221 0111 1123569999998765543
No 314
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=23.78 E-value=23 Score=26.03 Aligned_cols=62 Identities=26% Similarity=0.557 Sum_probs=42.1
Q ss_pred CCCchhhccccCCCCccchhhhhh----hhhhcccccccCCCCCCCCCceeehhhhhhhhccc--cccccccc
Q psy15639 10 LGNCRVCLKSFKPDDYSRVCYECH----QKVCEDCASYSKLDENQDENTWRCSICRRKLQSRA--QPVLSQNS 76 (135)
Q Consensus 10 ~g~CRVClKsfkP~e~~~tC~eCq----qkVCEDCASYSkl~~~ed~~~WrCSvCRRK~~sr~--qp~~~q~s 76 (135)
-|.|-||.--.+|-..-|+|.||. |.-|--|.+.--. .+-+-|..|-+-=..|+ +-+|.+.|
T Consensus 29 dGkC~iCDs~Vrp~~~VrICdeCs~G~~~~rCIiCg~~~g~-----~dAYYC~eC~~lEKDRDGCPriiN~Gs 96 (109)
T 2k0a_A 29 DGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGV-----NDAFYCWECCRLGKDKDGCPRILNLGS 96 (109)
T ss_dssp TTCCTTTCCCCCCCEECEEEHHHHTSSTTSBCTTTSSSBCC-----EECEECHHHHHHTSTTSCCCCBCSCSS
T ss_pred CCcccccCCccCCcceEEECCcCCCCCcCCceEEcCCCCCc-----ccceehHhhhhhhccccCCCeeEecCc
Confidence 378999999999999999999996 5567777733222 22677888765444443 23444444
No 315
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=23.64 E-value=22 Score=22.33 Aligned_cols=14 Identities=21% Similarity=0.572 Sum_probs=11.3
Q ss_pred CCCCceeehhhhhh
Q psy15639 50 QDENTWRCSICRRK 63 (135)
Q Consensus 50 ed~~~WrCSvCRRK 63 (135)
+-+..|+|.+|+..
T Consensus 32 ~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 32 DIPADWVCPDCGVG 45 (55)
T ss_dssp GSCTTCCCTTTCCC
T ss_pred HCCCCCcCCCCCCC
Confidence 45788999999863
No 316
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=23.26 E-value=19 Score=20.52 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=17.7
Q ss_pred CCCCCchhhccccC---------CCCccchhhhhhh
Q psy15639 8 ARLGNCRVCLKSFK---------PDDYSRVCYECHQ 34 (135)
Q Consensus 8 ~r~g~CRVClKsfk---------P~e~~~tC~eCqq 34 (135)
.++-.|.+|.|+|. .++-...|..|..
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k 47 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHT 47 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCC
T ss_pred CCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCC
Confidence 34567999998873 3455566766653
No 317
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.13 E-value=22 Score=23.44 Aligned_cols=19 Identities=16% Similarity=0.231 Sum_probs=14.6
Q ss_pred CCCCCCCCCchhhccccCC
Q psy15639 4 DKPAARLGNCRVCLKSFKP 22 (135)
Q Consensus 4 ~kp~~r~g~CRVClKsfkP 22 (135)
.|.+.++-.|.+|.|+|.-
T Consensus 12 ~~~gekpy~C~~Cgk~F~~ 30 (102)
T 2ghf_A 12 NKKVEGGYECKYCTFQTPD 30 (102)
T ss_dssp CCCCCSSEECSSCSCEESC
T ss_pred cCCCCcCcCCCCCCCccCC
Confidence 4566677889999999864
No 318
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.86 E-value=30 Score=21.00 Aligned_cols=8 Identities=13% Similarity=-0.106 Sum_probs=5.8
Q ss_pred chhhcccc
Q psy15639 13 CRVCLKSF 20 (135)
Q Consensus 13 CRVClKsf 20 (135)
|.+|.|.|
T Consensus 53 C~~C~~~f 60 (115)
T 2dmi_A 53 DNNNPKRW 60 (115)
T ss_dssp CCCCCSCC
T ss_pred CCCCCccc
Confidence 77777776
No 319
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.82 E-value=19 Score=19.87 Aligned_cols=15 Identities=27% Similarity=0.295 Sum_probs=11.2
Q ss_pred CCCCCchh--hccccCC
Q psy15639 8 ARLGNCRV--CLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRV--ClKsfkP 22 (135)
.|+-.|.+ |.|+|.-
T Consensus 7 ekp~~C~~~~C~k~F~~ 23 (38)
T 2eln_A 7 GILLKCPTDGCDYSTPD 23 (38)
T ss_dssp CCCEECSSSSCCCEESC
T ss_pred CCCCCCCCCCCCCccCC
Confidence 45668986 9999963
No 320
>2yvr_A Transcription intermediary factor 1-beta; ZF-B_BOX domain, structural genomics, NPPSFA; 1.80A {Homo sapiens}
Probab=22.77 E-value=15 Score=21.02 Aligned_cols=19 Identities=26% Similarity=0.716 Sum_probs=15.9
Q ss_pred Cccchhhhhhhhhhccccc
Q psy15639 24 DYSRVCYECHQKVCEDCAS 42 (135)
Q Consensus 24 e~~~tC~eCqqkVCEDCAS 42 (135)
.....|.+|+..||..|..
T Consensus 16 ~l~lfC~~~~~~iC~~C~~ 34 (50)
T 2yvr_A 16 PLVLFCESCDTLTCRDCQL 34 (50)
T ss_dssp BCCEEETTTTEEECHHHHH
T ss_pred CEEEEeCCCCEEEecccCC
Confidence 3556799999999999976
No 321
>1ovx_A ATP-dependent CLP protease ATP-binding subunit CL; treble CLEF zinc finger, homodimer, metal binding protein; NMR {Escherichia coli} SCOP: g.39.1.11
Probab=22.73 E-value=19 Score=24.11 Aligned_cols=22 Identities=18% Similarity=0.498 Sum_probs=13.4
Q ss_pred CCceeehhhhhhhhccccccccc
Q psy15639 52 ENTWRCSICRRKLQSRAQPVLSQ 74 (135)
Q Consensus 52 ~~~WrCSvCRRK~~sr~qp~~~q 74 (135)
..+.+||.|+|. ++-+..+|+-
T Consensus 16 ~~~~~CSFCGK~-e~eV~~LIaG 37 (67)
T 1ovx_A 16 GKLLYCSFCGKS-QHEVRKLIAG 37 (67)
T ss_dssp --CCCCTTTCCC-TTTSSSEEEC
T ss_pred CCCcEecCCCCC-HHHHcccCCC
Confidence 445789999984 4445555644
No 322
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.70 E-value=16 Score=20.63 Aligned_cols=15 Identities=33% Similarity=0.682 Sum_probs=12.1
Q ss_pred CCCCCCchhhccccC
Q psy15639 7 AARLGNCRVCLKSFK 21 (135)
Q Consensus 7 ~~r~g~CRVClKsfk 21 (135)
+.|.-.|.+|.|+|.
T Consensus 7 ~~~~~~C~~C~k~f~ 21 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV 21 (66)
T ss_dssp CCCEEECSSSCCEEE
T ss_pred CCCCeeccccCCccC
Confidence 456678999999998
No 323
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.62 E-value=22 Score=17.46 Aligned_cols=14 Identities=21% Similarity=0.354 Sum_probs=9.9
Q ss_pred CCCCch--hhccccCC
Q psy15639 9 RLGNCR--VCLKSFKP 22 (135)
Q Consensus 9 r~g~CR--VClKsfkP 22 (135)
+.-.|. .|.|+|.-
T Consensus 5 k~~~C~~~~C~k~f~~ 20 (38)
T 1bhi_A 5 KPFLCTAPGCGQRFTN 20 (38)
T ss_dssp CCEECCCTTTCCEESS
T ss_pred cceECCCCCCCcccCC
Confidence 445788 48888864
No 324
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=22.37 E-value=23 Score=19.88 Aligned_cols=9 Identities=44% Similarity=1.039 Sum_probs=4.6
Q ss_pred Cchhhcccc
Q psy15639 12 NCRVCLKSF 20 (135)
Q Consensus 12 ~CRVClKsf 20 (135)
.|.+|.|.|
T Consensus 31 ~C~~C~~~f 39 (82)
T 2kmk_A 31 PCQYCGKRF 39 (82)
T ss_dssp ECSSSCCEE
T ss_pred eCCcCChhh
Confidence 455555554
No 325
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=22.07 E-value=45 Score=20.03 Aligned_cols=15 Identities=27% Similarity=0.512 Sum_probs=11.6
Q ss_pred CCCCCCchhhccccC
Q psy15639 7 AARLGNCRVCLKSFK 21 (135)
Q Consensus 7 ~~r~g~CRVClKsfk 21 (135)
..+.-.|.+|.|.|.
T Consensus 4 ~~~~~~C~~C~~~f~ 18 (124)
T 2dlq_A 4 GSSGVECPTCHKKFL 18 (124)
T ss_dssp CCSSCCCTTTCCCCS
T ss_pred CCCCCCCCCCCCcCC
Confidence 455678999999986
No 326
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.67 E-value=36 Score=20.54 Aligned_cols=13 Identities=38% Similarity=1.002 Sum_probs=9.0
Q ss_pred ceeehhhhhhhhc
Q psy15639 54 TWRCSICRRKLQS 66 (135)
Q Consensus 54 ~WrCSvCRRK~~s 66 (135)
=.+|++|++.|..
T Consensus 43 CF~C~~C~~~L~~ 55 (82)
T 2ehe_A 43 CFRCCRCQRSLAD 55 (82)
T ss_dssp TSBCTTTCCBCSS
T ss_pred CCeecCCCCccCC
Confidence 3578888877753
No 327
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=21.58 E-value=34 Score=23.98 Aligned_cols=12 Identities=33% Similarity=1.173 Sum_probs=8.6
Q ss_pred eeehhhhhhhhc
Q psy15639 55 WRCSICRRKLQS 66 (135)
Q Consensus 55 WrCSvCRRK~~s 66 (135)
++|..|++.|.+
T Consensus 148 F~C~~C~~~L~~ 159 (182)
T 2jtn_A 148 FACVVCKRQLAT 159 (182)
T ss_dssp CCCTTTCCCCCT
T ss_pred CcCCCCCCCCCC
Confidence 468888877764
No 328
>3kos_A HTH-type transcriptional activator AMPR; alpha-beta sandwich, DNA-binding, transcription regulation; HET: MES; 1.83A {Citrobacter freundii} PDB: 3kot_A
Probab=21.51 E-value=38 Score=21.69 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=15.9
Q ss_pred chHHHHHHHhhcccccccc
Q psy15639 82 DVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 82 ~vpvlealqrrhsd~klg~ 100 (135)
=.+++..++++|++++|=.
T Consensus 27 l~~~l~~f~~~~P~i~l~i 45 (219)
T 3kos_A 27 LFPLLSDFKRSYPHIDLHI 45 (219)
T ss_dssp HHHHHHHHHHHCTTEEEEE
T ss_pred HHhHHHHHHHHCCCceEEE
Confidence 3589999999999988754
No 329
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.18 E-value=30 Score=22.43 Aligned_cols=53 Identities=15% Similarity=0.395 Sum_probs=32.4
Q ss_pred CCCCCchhhccccCCCCccchhhhhhhhhhccccc-ccCCCCCCCCCceeehhhhhhhhccc
Q psy15639 8 ARLGNCRVCLKSFKPDDYSRVCYECHQKVCEDCAS-YSKLDENQDENTWRCSICRRKLQSRA 68 (135)
Q Consensus 8 ~r~g~CRVClKsfkP~e~~~tC~eCqqkVCEDCAS-YSkl~~~ed~~~WrCSvCRRK~~sr~ 68 (135)
.....|-||+..|.+++-+. .|.++.=.+|.. |-+.. ..=+|..||....-.+
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~---~C~h~fH~~Ci~kWl~~~-----~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCE---TCGIRMHLPCVAKYFQSN-----AEPRCPHCNDYWPHEI 66 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECS---SSCCEECHHHHHHHSTTC-----SSCCCTTTCSCCCSCC
T ss_pred CCCCcCcchhhHcccCCccC---CCCchhhHHHHHHHHHhc-----CCCCCCCCcCcCCCCC
Confidence 34578999999999887554 444444344443 22221 1136999997765443
No 330
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.08 E-value=41 Score=19.56 Aligned_cols=15 Identities=33% Similarity=0.647 Sum_probs=11.8
Q ss_pred CCCCCchhhccccCC
Q psy15639 8 ARLGNCRVCLKSFKP 22 (135)
Q Consensus 8 ~r~g~CRVClKsfkP 22 (135)
.+.-.|.+|.|.|.-
T Consensus 6 ~~~~~C~~C~~~f~~ 20 (96)
T 2dmd_A 6 SGPHKCEVCGKCFSR 20 (96)
T ss_dssp CCCCCBTTTTBCCCC
T ss_pred CcCeECCCCCCccCC
Confidence 455689999999974
No 331
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.69 E-value=35 Score=21.25 Aligned_cols=10 Identities=40% Similarity=1.159 Sum_probs=8.3
Q ss_pred CCceeehhhh
Q psy15639 52 ENTWRCSICR 61 (135)
Q Consensus 52 ~~~WrCSvCR 61 (135)
+..|.|++|-
T Consensus 9 ~g~W~C~~C~ 18 (47)
T 2ebq_A 9 IGTWDCDTCL 18 (47)
T ss_dssp SSSEECSSSC
T ss_pred CCceECCeee
Confidence 5789999994
No 332
>3hhf_B Transcriptional regulator, LYSR family; transcription factor, structur genomics, oxford protein production facility, OPPF; 2.30A {Neisseria meningitidis serogroup B}
Probab=20.55 E-value=41 Score=21.12 Aligned_cols=21 Identities=14% Similarity=0.339 Sum_probs=16.8
Q ss_pred cchHHHHHHHhhccccccccC
Q psy15639 81 LDVPVLEALQRRHSDVKIGSA 101 (135)
Q Consensus 81 l~vpvlealqrrhsd~klg~~ 101 (135)
+=.+++..++++|++++|=..
T Consensus 21 ~l~~~l~~f~~~~P~v~l~i~ 41 (213)
T 3hhf_B 21 LLAPLAAKFNERYPHIRLSLV 41 (213)
T ss_dssp THHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEE
Confidence 346899999999999887653
No 333
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=20.38 E-value=24 Score=20.74 Aligned_cols=13 Identities=31% Similarity=0.938 Sum_probs=10.2
Q ss_pred CCCchhhccccCC
Q psy15639 10 LGNCRVCLKSFKP 22 (135)
Q Consensus 10 ~g~CRVClKsfkP 22 (135)
+-.|.+|.|+|.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (88)
T 1llm_C 3 PFQCRICMRNFSR 15 (88)
T ss_dssp CEECTTTCCEESC
T ss_pred CCcCCCCCCccCC
Confidence 4579999999964
No 334
>3jv9_A OXYR, transcriptional regulator, LYSR family; LYSR-type transcriptional regulator, LTTR, redox, structural genomics, OPPF; 2.39A {Neisseria meningitidis}
Probab=20.34 E-value=45 Score=20.95 Aligned_cols=20 Identities=15% Similarity=0.164 Sum_probs=15.7
Q ss_pred cchHHHHHHHhhcccccccc
Q psy15639 81 LDVPVLEALQRRHSDVKIGS 100 (135)
Q Consensus 81 l~vpvlealqrrhsd~klg~ 100 (135)
+=.+++..++++|++++|-.
T Consensus 18 ~l~~~l~~~~~~~P~i~i~i 37 (219)
T 3jv9_A 18 LLPKLIVSLRRTAPKMPLML 37 (219)
T ss_dssp HHHHHHHHHHHHSTTCCEEE
T ss_pred HHHHHHHHHHHHCCCcEEEE
Confidence 44578999999999987743
No 335
>2ql3_A Probable transcriptional regulator, LYSR family P; APC7314, rhodococcus RHA1, structural genomics, PSI-2; HET: MSE; 2.05A {Rhodococcus SP}
Probab=20.33 E-value=42 Score=21.31 Aligned_cols=19 Identities=11% Similarity=0.088 Sum_probs=15.2
Q ss_pred cchHHHHHHHhhccccccc
Q psy15639 81 LDVPVLEALQRRHSDVKIG 99 (135)
Q Consensus 81 l~vpvlealqrrhsd~klg 99 (135)
+=.+++..++++|++++|=
T Consensus 19 ~l~~~l~~f~~~~P~i~i~ 37 (209)
T 2ql3_A 19 ILPSMLYAFTAEYPRASVE 37 (209)
T ss_dssp THHHHHHHHHHHCTTEEEE
T ss_pred hHHHHHHHHHHHCCCceEE
Confidence 3357899999999998764
No 336
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=20.32 E-value=24 Score=22.04 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=11.2
Q ss_pred CCCCchhhccccCCC
Q psy15639 9 RLGNCRVCLKSFKPD 23 (135)
Q Consensus 9 r~g~CRVClKsfkP~ 23 (135)
++-.|.+|.|+|.-.
T Consensus 73 ~~~~C~~C~k~f~~~ 87 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSS 87 (129)
T ss_dssp CSEECTTTCCEESSH
T ss_pred CCeECCCCCcccCCH
Confidence 456799999998753
No 337
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=20.10 E-value=30 Score=20.10 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=12.5
Q ss_pred CCCCCCchhhccccCCC
Q psy15639 7 AARLGNCRVCLKSFKPD 23 (135)
Q Consensus 7 ~~r~g~CRVClKsfkP~ 23 (135)
..+.-.|.+|.|.|.-.
T Consensus 4 ~~~~~~C~~C~~~f~~~ 20 (95)
T 2yt9_A 4 GSSGVACEICGKIFRDV 20 (95)
T ss_dssp CCSCEECSSSCCEESSS
T ss_pred CCCCeECCCCCCccCCh
Confidence 34566799999999643
No 338
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=20.00 E-value=29 Score=18.79 Aligned_cols=11 Identities=27% Similarity=1.020 Sum_probs=8.4
Q ss_pred CCCceeehhhh
Q psy15639 51 DENTWRCSICR 61 (135)
Q Consensus 51 d~~~WrCSvCR 61 (135)
|...|.|+.|-
T Consensus 3 ~~~~W~C~~CT 13 (31)
T 1nj3_A 3 TSAMWACQHCT 13 (31)
T ss_dssp CSCCEECSSSC
T ss_pred CCccccCCccc
Confidence 35689999885
Done!