BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15646
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=2
Length = 3053
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 107/160 (66%), Gaps = 8/160 (5%)
Query: 144 EQANESDDETPANDH----DPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRF--V 197
E AN+S + + H D P F+P++PLPD++ V TGEE+E F RAKL+RF
Sbjct: 1142 ELANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGE 1201
Query: 198 DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWF 257
KEWKERG+G +K+L++K +GK+RLLMRR+ V KICANH++ DM+L P + ++++W
Sbjct: 1202 SKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH 1261
Query: 258 AQDYADEVVSDEQLCAKFKLPEDAERFRSVTTGEENETVL 297
A DYADE+ EQL +FK PE+A F+ EE + +L
Sbjct: 1262 ALDYADELPKPEQLAIRFKTPEEAALFK--CKFEEAQNIL 1299
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 11/151 (7%)
Query: 144 EQANES------DDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFV 197
E+AN S DD D D + F+P++ +P++V + TGEE+E VL+ QR KL+RF
Sbjct: 1825 EKANTSSDLEKDDDAYKTEDSDDI-HFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRF- 1882
Query: 198 DKE---WKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 254
D E WKERG+G LK+LKN+ GK+R+LMRR+ V K+CANH++ M LKP+ + +A+
Sbjct: 1883 DAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAW 1942
Query: 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285
+W A D++D EQL AKFK PE AE F+
Sbjct: 1943 MWLASDFSDGDAKLEQLAAKFKTPELAEEFK 1973
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RAKLYR+ DK +WKERG+G +K+L+N D +V
Sbjct: 2147 FEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRY-DKDVGQWKERGIGDIKILQNYDNKQV 2205
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 2206 RIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDV 2265
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 2266 ADSFKKIFDEAKTAQEKDSLI 2286
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 5/131 (3%)
Query: 158 HDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKN 214
H+ F+PI+ LP EV V +GEE+E VLF++RAKLYR+ D+ +WKERG+G +K+L +
Sbjct: 2735 HNEDIHFEPIVSLP-EVEVKSGEEDEEVLFKERAKLYRW-DRDVSQWKERGIGDIKILWH 2792
Query: 215 KDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAK 274
R+LMRRD V K+CANH + + MELKP+ + A +W A DYAD EQL +
Sbjct: 2793 TMKKYYRILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVR 2852
Query: 275 FKLPEDAERFR 285
FK E E F+
Sbjct: 2853 FKTKEMTESFK 2863
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 277 LPEDAERFRSVTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGKVRLL 334
LP+ E V TGEE+E F RAKL+RF KEWKERG+G +K+L++K +GK+RLL
Sbjct: 1172 LPDKIE----VKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSGKIRLL 1227
Query: 335 MRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYADEV 376
MRR+ V KICANH++ DM+L P + + ++++W A DYADE+
Sbjct: 1228 MRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADEL 1269
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 74/102 (72%), Gaps = 8/102 (7%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVR 332
++PE E + TGEE+E VL+ QR KL+RF D E WKERG+G LK+LKN+ GK+R
Sbjct: 1855 QMPEKVE----LVTGEEDEKVLYSQRVKLFRF-DAEISQWKERGLGNLKILKNEVNGKLR 1909
Query: 333 LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
+LMRR+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1910 MLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSD 1951
Score = 105 bits (262), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RAKLYR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 2159 VSSGEENEQVVFSHRAKLYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 2217
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 2218 CANHRITPDMTLQTMKGTERVWVWTACDFAD 2248
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V +GEE+E VLF++RAKLYR+ D+ +WKERG+G +K+L + R+LMRRD V K+
Sbjct: 2752 VKSGEEDEEVLFKERAKLYRW-DRDVSQWKERGIGDIKILWHTMKKYYRILMRRDQVFKV 2810
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + + MELKP++ + A +W A DYAD
Sbjct: 2811 CANHVITKAMELKPLNVSNNALVWTASDYAD 2841
>sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2
Length = 3224
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 99/138 (71%), Gaps = 4/138 (2%)
Query: 162 PDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGK 219
P F+P++PLPD++ V TGEE+E F RAKL+RF KEWKERG+G +K+L++K +GK
Sbjct: 1170 PHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGK 1229
Query: 220 VRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPE 279
+RLLMRR+ V KICANH++ DM+L P + ++++W A DYADE+ EQL +FK PE
Sbjct: 1230 IRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPE 1289
Query: 280 DAERFRSVTTGEENETVL 297
+A F+ EE +++L
Sbjct: 1290 EAALFK--CKFEEAQSIL 1305
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 137/258 (53%), Gaps = 23/258 (8%)
Query: 41 FGSPAQLTSSPLGVSTTGTANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN--- 97
F P G+S G KP N G I G N G I G +
Sbjct: 1889 FSIPVSADGFKFGISEPGNQEKKSEKPLEN---GTGFQAQDISGQKNGRGVIFGQTSSTF 1945
Query: 98 TSGQLNSSQTGSGQTTPHKFQIQMPH-ESLSVIKKQLETSPLIKQSLEQANES------D 150
T L S +G G +F + P+ + S ++L +S K + +AN S D
Sbjct: 1946 TFADLAKSTSGEG----FQFGKKDPNFKGFSGAGEKLFSSQYGKMA-NKANTSGDFEKDD 2000
Query: 151 DETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERGVG 207
D D D + F+P++ +P++V + TGEE+E VL+ QR KL+RF D E WKERG+G
Sbjct: 2001 DAYKTEDSDDI-HFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLG 2058
Query: 208 QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVS 267
LK+LKN+ GK+R+LMRR+ V K+CANH++ M LKP+ + +A++W A D++D
Sbjct: 2059 NLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAK 2118
Query: 268 DEQLCAKFKLPEDAERFR 285
EQL AKFK PE AE F+
Sbjct: 2119 LEQLAAKFKTPELAEEFK 2136
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RAKLYR+ DK +WKERG+G +K+L+N D +V
Sbjct: 2310 FEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRY-DKDVGQWKERGIGDIKILQNYDNKQV 2368
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 2369 RIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLWTACDFADGERKVEHLAVRFKLQDV 2428
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 2429 ADSFKKIFDEAKTAQEKDSLI 2449
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 8/145 (5%)
Query: 144 EQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---E 200
E + SD+E H+ F+PI+ LP EV V +GEE+E +LF++RAKLYR+ D+ +
Sbjct: 2895 EDEDGSDEEVV---HNEDIHFEPIVSLP-EVEVKSGEEDEEILFKERAKLYRW-DRDVSQ 2949
Query: 201 WKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQD 260
WKERGVG +K+L + R+LMRRD V K+CANH + + MELKP+ + A +W A D
Sbjct: 2950 WKERGVGDIKILWHTMKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWTASD 3009
Query: 261 YADEVVSDEQLCAKFKLPEDAERFR 285
YAD EQL +FK E A+ F+
Sbjct: 3010 YADGEAKVEQLAVRFKTKEVADCFK 3034
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 277 LPEDAERFRSVTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGKVRLL 334
LP+ E V TGEE+E F RAKL+RF KEWKERG+G +K+L++K +GK+RLL
Sbjct: 1178 LPDKIE----VKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLL 1233
Query: 335 MRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYADEV 376
MRR+ V KICANH++ DM+L P + + ++++W A DYADE+
Sbjct: 1234 MRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADEL 1275
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 74/102 (72%), Gaps = 8/102 (7%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVR 332
++PE E + TGEE+E VL+ QR KL+RF D E WKERG+G LK+LKN+ GK+R
Sbjct: 2018 QMPEKVE----LVTGEEDEKVLYSQRVKLFRF-DAEVSQWKERGLGNLKILKNEVNGKLR 2072
Query: 333 LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
+LMRR+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 2073 MLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSD 2114
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RAKLYR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 2322 VSSGEENEQVVFSHRAKLYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 2380
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 2381 CANHRITPDMTLQNMKGTERVWLWTACDFAD 2411
Score = 101 bits (252), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V +GEE+E +LF++RAKLYR+ D+ +WKERGVG +K+L + R+LMRRD V K+
Sbjct: 2923 VKSGEEDEEILFKERAKLYRW-DRDVSQWKERGVGDIKILWHTMKNYYRILMRRDQVFKV 2981
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + + MELKP++ + A +W A DYAD
Sbjct: 2982 CANHVITKTMELKPLNVSNNALVWTASDYAD 3012
>sp|A6NKT7|RGPD3_HUMAN RanBP2-like and GRIP domain-containing protein 3 OS=Homo sapiens
GN=RGPD3 PE=2 SV=2
Length = 1758
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 149/302 (49%), Gaps = 37/302 (12%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F P G+S G
Sbjct: 872 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIPVSADGFKFGISEPG 931
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + L I G G I G + T + S +G G
Sbjct: 932 NQEKKSEKPLENDT---GLQAQDISGRKKGRGVIFGQTSSTFTFADVAKSTSGEG----- 983
Query: 116 KFQI---QMPHESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKP 166
FQ + + S ++L +S K + +AN S DD D D + F+P
Sbjct: 984 -FQFGKKDLNFKGFSGAGEKLFSSQYGKMA-NKANTSGDFEKDDDAYKTEDSDDI-HFEP 1040
Query: 167 IIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLL 223
++ +P++V + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GKVR+L
Sbjct: 1041 VVQMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERGLGNLKILKNEVNGKVRML 1099
Query: 224 MRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAER 283
M+R+ V K+CANH++ M LKP+ + +A++W A D++D E+L AKFK PE AE
Sbjct: 1100 MQREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEE 1159
Query: 284 FR 285
F+
Sbjct: 1160 FK 1161
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 95/141 (67%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RA+ YR+ DK +WKERG+G +K+L+N D V
Sbjct: 1335 FEPVVPLPDLVEVSSGEENEQVVFSHRAEFYRY-DKDVGQWKERGIGDIKILQNYDNKHV 1393
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R+LMRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1394 RILMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1453
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1454 ADSFKKIFDEAKTAQEKDSLI 1474
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 72/102 (70%), Gaps = 8/102 (7%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVR 332
++PE E + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GKVR
Sbjct: 1043 QMPEKVE----LVTGEEGEKVLYSQGVKLFRF-DAEVSQWKERGLGNLKILKNEVNGKVR 1097
Query: 333 LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
+LM+R+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1098 MLMQREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSD 1139
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RA+ YR+ DK +WKERG+G +K+L+N D VR+LMRRD V K+
Sbjct: 1347 VSSGEENEQVVFSHRAEFYRY-DKDVGQWKERGIGDIKILQNYDNKHVRILMRRDQVLKL 1405
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1406 CANHRITPDMSLQNMKGTERVWVWTACDFAD 1436
>sp|O14715|RGPD8_HUMAN RANBP2-like and GRIP domain-containing protein 8 OS=Homo sapiens
GN=RGPD8 PE=1 SV=2
Length = 1765
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 149/301 (49%), Gaps = 35/301 (11%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F P G+S G
Sbjct: 871 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIPVSADGFKFGISEPG 930
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + L I G G I G + T + S +G G
Sbjct: 931 NQEKKREKPLENDT---GLQAQDIRGRKKGRGVIFGQTSSTFTFADVAKSTSGEG----- 982
Query: 116 KFQI---QMPHESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKP 166
FQ + + S ++L +S K + +AN S DD D D + F+P
Sbjct: 983 -FQFGKKDLNFKGFSGAGEKLFSSRYGKMA-NKANTSGDFEKDDDAYKTEDSDDI-HFEP 1039
Query: 167 IIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLM 224
++ +P++V + TGEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK+R+LM
Sbjct: 1040 VVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLM 1099
Query: 225 RRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERF 284
RR+ V K+CANH++ M LKP+ + +A++W A D++D E+L AKFK PE AE F
Sbjct: 1100 RREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEF 1159
Query: 285 R 285
+
Sbjct: 1160 K 1160
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RA++YR+ DK +WKERG+G +K+L+N D +V
Sbjct: 1334 FEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY-DKDVGQWKERGIGDIKILQNYDNKQV 1392
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1393 RIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1452
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1453 ADSFKKIFDEAKTAQEKDSLI 1473
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRL 333
++PE E + TGEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK+R+
Sbjct: 1042 QMPEKVE----LVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRM 1097
Query: 334 LMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
LMRR+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1098 LMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSD 1138
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RA++YR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 1346 VSSGEENEQVVFSHRAEIYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 1404
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1405 CANHRITPDMSLQNMKGTERVWVWTACDFAD 1435
>sp|Q99666|RGPD5_HUMAN RANBP2-like and GRIP domain-containing protein 5/6 OS=Homo sapiens
GN=RGPD5 PE=1 SV=3
Length = 1765
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 148/301 (49%), Gaps = 35/301 (11%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F P G+S G
Sbjct: 871 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIPVSADGFKFGISEPG 930
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + I G G I G + T + S +G G
Sbjct: 931 NQEKKREKPLENDT---GFQAQDISGRKKGRGVIFGQTSSTFTFADVAKSTSGEG----- 982
Query: 116 KFQI---QMPHESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKP 166
FQ + + S ++L +S K + +AN S DD D D + F+P
Sbjct: 983 -FQFGKKDLNFKGFSGAGEKLFSSRYGKMA-NKANTSGDFEKDDDAYKTEDSDDI-HFEP 1039
Query: 167 IIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLM 224
++ +P++V + TGEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK+R+LM
Sbjct: 1040 VVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRMLM 1099
Query: 225 RRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERF 284
RR+ V K+CANH++ M LKP+ + +A++W A D++D E+L AKFK PE AE F
Sbjct: 1100 RREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEF 1159
Query: 285 R 285
+
Sbjct: 1160 K 1160
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RA++YR+ DK +WKERG+G +K+L+N D +V
Sbjct: 1334 FEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRY-DKDVGQWKERGIGDIKILQNYDNKQV 1392
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1393 RIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1452
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1453 ADSFKKIFDEAKTAQEKDSLI 1473
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRL 333
++PE E + TGEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK+R+
Sbjct: 1042 QMPEKVE----LVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRM 1097
Query: 334 LMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
LMRR+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1098 LMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSD 1138
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RA++YR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 1346 VSSGEENEQVVFSHRAEIYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 1404
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1405 CANHRITPDMSLQNMKGTERVWVWTACDFAD 1435
>sp|P0DJD0|RGPD1_HUMAN RANBP2-like and GRIP domain-containing protein 1 OS=Homo sapiens
GN=RGPD1 PE=2 SV=1
Length = 1748
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F G+S G
Sbjct: 856 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIAVSADGFKFGISEPG 915
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + I G N G I G + T + S +G G
Sbjct: 916 NQEKKSEKPLENDT---GFQAQDISGQKNGRGVIFGQTSSTFTFADVAKSTSGEG----F 968
Query: 116 KFQIQMPH-ESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKPII 168
+F + P+ + S ++L +S K + +AN S DD D D + F+P++
Sbjct: 969 QFGKKDPNFKGFSGAGEKLFSSQCGKMA-NKANTSGDFEKDDDACKTEDSDDI-HFEPVV 1026
Query: 169 PLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLLMR 225
+P++V + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GK R+LMR
Sbjct: 1027 QMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKILKNEVNGKPRMLMR 1085
Query: 226 RDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285
RD V K+CANH++ M LKP+ + +A++W A D++D E+L A+FK PE AE F+
Sbjct: 1086 RDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1145
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RA+LYR+ DK +WKERG+G +K+L+N D +V
Sbjct: 1319 FEPVVPLPDLVEVSSGEENEQVVFSHRAELYRY-DKDVGQWKERGIGDIKILQNYDNKQV 1377
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1378 RIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1437
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1438 ADSFKKIFDEAKTAQEKDSLI 1458
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 8/102 (7%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVR 332
++PE E + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GK R
Sbjct: 1027 QMPEKVE----LVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKILKNEVNGKPR 1081
Query: 333 LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
+LMRRD V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1082 MLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSD 1123
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RA+LYR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 1331 VSSGEENEQVVFSHRAELYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 1389
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1390 CANHRITPDMSLQNMKGTERVWVWTACDFAD 1420
>sp|P0DJD1|RGPD2_HUMAN RANBP2-like and GRIP domain-containing protein 2 OS=Homo sapiens
GN=RGPD2 PE=2 SV=1
Length = 1756
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 149/300 (49%), Gaps = 33/300 (11%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F G+S G
Sbjct: 864 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIAVSADGFKFGISEPG 923
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + I G N G I G + T + S +G G
Sbjct: 924 NQEKKSEKPLENDT---GFQAQDISGQKNGRGVIFGQTSSTFTFADVAKSTSGEG----F 976
Query: 116 KFQIQMPH-ESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKPII 168
+F + P+ + S ++L +S K + +AN S DD D D + F+P++
Sbjct: 977 QFGKKDPNFKGFSGAGEKLFSSQCGKMA-NKANTSGDFEKDDDACKTEDSDDI-HFEPVV 1034
Query: 169 PLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLLMR 225
+P++V + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GK R+LMR
Sbjct: 1035 QMPEKVELVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKILKNEVNGKPRMLMR 1093
Query: 226 RDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285
RD V K+CANH++ M LKP+ + +A++W A D++D E+L A+FK PE AE F+
Sbjct: 1094 RDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEEFK 1153
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 96/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F A+LYR+ DK +WKERG+G +K+L+N D +V
Sbjct: 1327 FEPVVPLPDLVEVSSGEENEQVVFSHMAELYRY-DKDVGQWKERGIGDIKILQNYDNKQV 1385
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1386 RIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1445
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1446 ADSFKKIFDEAKTAQEKDSLI 1466
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 71/102 (69%), Gaps = 8/102 (7%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVR 332
++PE E + TGEE E VL+ Q KL+RF D E WKERG+G LK+LKN+ GK R
Sbjct: 1035 QMPEKVE----LVTGEEGEKVLYSQGVKLFRF-DAEISQWKERGLGNLKILKNEVNGKPR 1089
Query: 333 LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
+LMRRD V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1090 MLMRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSD 1131
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F A+LYR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 1339 VSSGEENEQVVFSHMAELYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 1397
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1398 CANHRITPDMSLQNMKGTERVWVWTACDFAD 1428
>sp|Q7Z3J3|RGPD4_HUMAN RanBP2-like and GRIP domain-containing protein 4 OS=Homo sapiens
GN=RGPD4 PE=2 SV=3
Length = 1758
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 149/299 (49%), Gaps = 31/299 (10%)
Query: 9 TGPPPQLSSTTPTSSN-----ATKIPPT-STSTADVKS----FGSPAQLTSSPLGVSTTG 58
TGP S + +S A + PT +S + KS F P G+S G
Sbjct: 872 TGPSVYYSQSPAYNSQYLLRPAANVTPTKGSSNTEFKSTKEGFSIPVSADGFKFGISEPG 931
Query: 59 TANSTPIKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLN---TSGQLNSSQTGSGQTTPH 115
KP N + I G N G I G + T + S +G G
Sbjct: 932 NQEKESEKPLENDT---GFQAQDISGQKNGRGVIFGQTSSTFTFADVAKSTSGEG----F 984
Query: 116 KFQIQMPH-ESLSVIKKQLETSPLIKQSLEQANES------DDETPANDHDPLPDFKPII 168
+F + P+ + S ++L +S K + +AN S DD D D + F+P++
Sbjct: 985 QFGKKDPNFKGFSGAGEKLFSSQCGKMA-NKANTSGDFEKDDDAYKTEDSDDI-HFEPVV 1042
Query: 169 PLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRR 226
+P++V + GEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK R+LMRR
Sbjct: 1043 QMPEKVELVIGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKPRMLMRR 1102
Query: 227 DIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285
+ V K+CANH++ M LKP+ + +A++W A D++D E+L AKFK PE AE F+
Sbjct: 1103 EQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEEFK 1161
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RA+LYR+ DK +WKERG+G +K+L+N D +V
Sbjct: 1335 FEPVVPLPDLVEVSSGEENEKVVFSHRAELYRY-DKDVGQWKERGIGDIKILQNYDNKQV 1393
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 1394 RIVMRRDQVLKLCANHTITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQDV 1453
Query: 281 AERFRSV----TTGEENETVL 297
A+ F+ + T +E ++++
Sbjct: 1454 ADSFKKIFDEAKTAQEKDSLI 1474
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RA+LYR+ DK +WKERG+G +K+L+N D +VR++MRRD V K+
Sbjct: 1347 VSSGEENEKVVFSHRAELYRY-DKDVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKL 1405
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 1406 CANHTITPDMSLQNMKGTERVWVWTACDFAD 1436
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
Query: 276 KLPEDAERFRSVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRL 333
++PE E + GEE E VL+ Q KL+RF ++WKERG+G LK+LKN+ GK R+
Sbjct: 1043 QMPEKVE----LVIGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKPRM 1098
Query: 334 LMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
LMRR+ V K+CANH++ M LKP+S + +A++W A D++D
Sbjct: 1099 LMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSD 1139
>sp|P48820|RBP2_BOVIN E3 SUMO-protein ligase RanBP2 (Fragment) OS=Bos taurus GN=RANBP2
PE=2 SV=2
Length = 1085
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Query: 164 FKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKV 220
F+P++PLPD V V++GEENE V+F RAKLYR+ DK+ WKERG+G +K+L+N + +V
Sbjct: 175 FEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRY-DKDAGQWKERGIGDIKILQNYENKQV 233
Query: 221 RLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPED 280
R++MRRD V K+CANH + DM L+ M T++ ++W A D+AD E L +FKL +
Sbjct: 234 RIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWVWTACDFADGERKIEHLAVRFKLQDV 293
Query: 281 AERFRSV 287
A+ F+ +
Sbjct: 294 ADSFKKI 300
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 116/211 (54%), Gaps = 13/211 (6%)
Query: 78 NTSQIGGNLNTSGQIGGPLNTSGQLNSSQTGSGQTTPHKFQIQMPHESLSVIKKQLETSP 137
+TSQ+ T G GP + L SS +G Q + +V Q TS
Sbjct: 695 STSQVESKTVTFGFGSGPGLSFADLASSNSGDFAFGSKDKNFQWANTGAAVFGAQ-STSK 753
Query: 138 LIKQSLEQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFV 197
+ E + SD+E H+ F+PI+ LP EV V +GEE+E +LF++RAKLYR+
Sbjct: 754 V----GEDEDGSDEEVV---HNEDIHFEPIVSLP-EVEVKSGEEDEEILFKERAKLYRW- 804
Query: 198 DKE---WKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 254
D+E WK+RGVG +K+L + R+LMRRD V K+CANH + + MELKP+ + A
Sbjct: 805 DREASQWKDRGVGDIKILWHTVKNYFRILMRRDQVFKVCANHVITKTMELKPLNVSNNAL 864
Query: 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285
+W A DYAD EQL +FK E A+ F+
Sbjct: 865 VWTASDYADGEAKVEQLAVRFKTKEMADCFK 895
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 68/91 (74%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V++GEENE V+F RAKLYR+ DK+ WKERG+G +K+L+N + +VR++MRRD V K+
Sbjct: 187 VSSGEENEQVVFSHRAKLYRY-DKDAGQWKERGIGDIKILQNYENKQVRIVMRRDQVLKL 245
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + DM L+ M T++ ++W A D+AD
Sbjct: 246 CANHRITPDMTLQNMKGTERVWVWTACDFAD 276
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 66/91 (72%), Gaps = 4/91 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V +GEE+E +LF++RAKLYR+ D+E WK+RGVG +K+L + R+LMRRD V K+
Sbjct: 784 VKSGEEDEEILFKERAKLYRW-DREASQWKDRGVGDIKILWHTVKNYFRILMRRDQVFKV 842
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFAQDYAD 374
CANH + + MELKP++ + A +W A DYAD
Sbjct: 843 CANHVITKTMELKPLNVSNNALVWTASDYAD 873
>sp|Q3T0M7|RANG_BOVIN Ran-specific GTPase-activating protein OS=Bos taurus GN=RANBP1 PE=2
SV=1
Length = 206
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 15/150 (10%)
Query: 142 SLEQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK-- 199
S E A+ES+ HDP F+PI+ LP E + T EE+E LF+ RAKL+RF +
Sbjct: 14 STENADESN-------HDP--QFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASEND 63
Query: 200 --EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWF 257
EWKERG G +KLLK+K+ G +RLLMRRD KICANH++ MELKP + +A++W
Sbjct: 64 LPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWN 123
Query: 258 AQ-DYADEVVSDEQLCAKFKLPEDAERFRS 286
D+ADE E L +F E+A++F++
Sbjct: 124 THADFADECPKQELLAIRFLNAENAQKFKT 153
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 75/120 (62%), Gaps = 10/120 (8%)
Query: 262 ADEVVSDEQLCAKFKLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDK----EWKERGV 317
ADE D Q LPE + + T EE+E LF+ RAKL+RF + EWKERG
Sbjct: 18 ADESNHDPQFEPIVSLPE-----QEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGT 72
Query: 318 GQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQ-DYADEV 376
G +KLLK+K+ G +RLLMRRD KICANH++ MELKP + + +A++W D+ADE
Sbjct: 73 GDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADEC 132
>sp|P43487|RANG_HUMAN Ran-specific GTPase-activating protein OS=Homo sapiens GN=RANBP1
PE=1 SV=1
Length = 201
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 8/152 (5%)
Query: 140 KQSLEQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK 199
K + E + S + T ++HDP F+PI+ LP E + T EE+E LF+ RAKL+RF +
Sbjct: 5 KDTHEDHDTSTENTDESNHDP--QFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASE 61
Query: 200 ----EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYI 255
EWKERG G +KLLK+K+ G +RLLMRRD KICANH++ MELKP + +A++
Sbjct: 62 NDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWV 121
Query: 256 WFAQ-DYADEVVSDEQLCAKFKLPEDAERFRS 286
W D+ADE E L +F E+A++F++
Sbjct: 122 WNTHADFADECPKPELLAIRFLNAENAQKFKT 153
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 74/119 (62%), Gaps = 10/119 (8%)
Query: 263 DEVVSDEQLCAKFKLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDK----EWKERGVG 318
DE D Q LPE + + T EE+E LF+ RAKL+RF + EWKERG G
Sbjct: 19 DESNHDPQFEPIVSLPE-----QEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTG 73
Query: 319 QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQ-DYADEV 376
+KLLK+K+ G +RLLMRRD KICANH++ MELKP + + +A++W D+ADE
Sbjct: 74 DVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADEC 132
>sp|P34022|RANG_MOUSE Ran-specific GTPase-activating protein OS=Mus musculus GN=Ranbp1
PE=1 SV=2
Length = 203
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 96/152 (63%), Gaps = 8/152 (5%)
Query: 140 KQSLEQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK 199
K S E + S + ++HDP F+PI+ LP E + T EE+E LF+ RAKL+RF +
Sbjct: 5 KDSHEDHDTSTENADESNHDP--QFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASE 61
Query: 200 ----EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYI 255
EWKERG G +KLLK+K+ G +RLLMRRD KICANH++ MELKP + +A++
Sbjct: 62 NDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWV 121
Query: 256 WFAQ-DYADEVVSDEQLCAKFKLPEDAERFRS 286
W D+ADE E L +F E+A++F++
Sbjct: 122 WNTHADFADECPKPELLAIRFLNAENAQKFKT 153
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 75/120 (62%), Gaps = 10/120 (8%)
Query: 262 ADEVVSDEQLCAKFKLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDK----EWKERGV 317
ADE D Q LPE + + T EE+E LF+ RAKL+RF + EWKERG
Sbjct: 18 ADESNHDPQFEPIVSLPE-----QEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGT 72
Query: 318 GQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWFAQ-DYADEV 376
G +KLLK+K+ G +RLLMRRD KICANH++ MELKP + + +A++W D+ADE
Sbjct: 73 GDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADEC 132
>sp|P92985|RBP1C_ARATH Ran-binding protein 1 homolog c OS=Arabidopsis thaliana GN=RANBP1C
PE=2 SV=1
Length = 219
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Query: 150 DDETPAN-DHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDKE---WKERG 205
+DET N D D PI+ L +EV VTTGEE+E + + ++K+YRF DKE WKERG
Sbjct: 12 EDETEVNEDEDTGAQVAPIVRL-EEVAVTTGEEDEDAVLDLKSKMYRF-DKEGNQWKERG 69
Query: 206 VGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEV 265
G +KLLK+K+TGKVRL+MR+ KICANH + M ++ +++ +W A D++D
Sbjct: 70 AGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGE 129
Query: 266 VSDEQLCAKFKLPEDAERF 284
+ DE C +F E+ + F
Sbjct: 130 LKDELFCIRFASIENCKTF 148
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 10/110 (9%)
Query: 286 SVTTGEENETVLFEQRAKLYRFVDKE---WKERGVGQLKLLKNKDTGKVRLLMRRDIVHK 342
+VTTGEE+E + + ++K+YRF DKE WKERG G +KLLK+K+TGKVRL+MR+ K
Sbjct: 37 AVTTGEEDEDAVLDLKSKMYRF-DKEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLK 95
Query: 343 ICANHFLHQDMELKPMSNTKQAYIWFAQDYA-----DEVVSDRFDS-GNC 386
ICANH + M ++ S +++ +W A D++ DE+ RF S NC
Sbjct: 96 ICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASIENC 145
>sp|Q9LMK7|RBP1A_ARATH Ran-binding protein 1 homolog a OS=Arabidopsis thaliana GN=RANBP1A
PE=1 SV=1
Length = 228
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 91/145 (62%), Gaps = 6/145 (4%)
Query: 144 EQANESDDETPAN-DHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK--- 199
E + ++E AN D D PI+ L +EV VTTGEE+E + + ++KLYRF DK
Sbjct: 7 EHEHRDEEEAGANEDEDTGAQVAPIVRL-EEVAVTTGEEDEDAVLDLKSKLYRF-DKDAN 64
Query: 200 EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQ 259
+WKERG G +K LK+K+TGK+RL+MR+ KICANHF+ M ++ +++ +W A+
Sbjct: 65 QWKERGAGTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHAR 124
Query: 260 DYADEVVSDEQLCAKFKLPEDAERF 284
D+AD + DE C +F E+ + F
Sbjct: 125 DFADGELKDELFCIRFASIENCKTF 149
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 73/110 (66%), Gaps = 10/110 (9%)
Query: 286 SVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHK 342
+VTTGEE+E + + ++KLYRF DK +WKERG G +K LK+K+TGK+RL+MR+ K
Sbjct: 38 AVTTGEEDEDAVLDLKSKLYRF-DKDANQWKERGAGTVKFLKHKNTGKIRLVMRQSKTLK 96
Query: 343 ICANHFLHQDMELKPMSNTKQAYIWFAQDYA-----DEVVSDRFDS-GNC 386
ICANHF+ M ++ +++ +W A+D+A DE+ RF S NC
Sbjct: 97 ICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASIENC 146
>sp|Q8RWG8|RBP1B_ARATH Ran-binding protein 1 homolog b OS=Arabidopsis thaliana GN=RANBP1B
PE=1 SV=2
Length = 217
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
Query: 144 EQANESDDETPAN-DHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVDK--- 199
E+ N ++ET AN D D PI+ L +EV VTTGEE+E + + ++KLYRF DK
Sbjct: 9 ERENRDEEETGANEDEDTGAQVAPIVRL-EEVAVTTGEEDEDTILDLKSKLYRF-DKDGS 66
Query: 200 EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQ 259
+WKERG G +K LK++ +GK+RL+MR+ KICANH + M ++ ++ +W A+
Sbjct: 67 QWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHAR 126
Query: 260 DYADEVVSDEQLCAKFKLPEDAERF 284
D++D + DE C +F E+ + F
Sbjct: 127 DFSDGELKDELFCIRFASVENCKAF 151
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 10/110 (9%)
Query: 286 SVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHK 342
+VTTGEE+E + + ++KLYRF DK +WKERG G +K LK++ +GK+RL+MR+ K
Sbjct: 40 AVTTGEEDEDTILDLKSKLYRF-DKDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLK 98
Query: 343 ICANHFLHQDMELKPMSNTKQAYIWFAQDYADEVVSD-----RFDS-GNC 386
ICANH + M ++ + ++ +W A+D++D + D RF S NC
Sbjct: 99 ICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASVENC 148
>sp|P41920|YRB1_YEAST Ran-specific GTPase-activating protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YRB1 PE=1
SV=1
Length = 201
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 7/145 (4%)
Query: 144 EQANESDDETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRF-VD-KEW 201
E+ + D+ P + P F+P++ L ++V V T EE+E VL++ RAKL+RF D KEW
Sbjct: 48 EETKKEGDDAPES---PDIHFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRFDADAKEW 103
Query: 202 KERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA-QD 260
KERG G K LKNK T KVR+LMRRD KICANH + + LKP + +++++ D
Sbjct: 104 KERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTAD 163
Query: 261 YADEVVSDEQLCAKFKLPEDAERFR 285
A+ +F E+A++F+
Sbjct: 164 IAEGEAEAFTFAIRFGSKENADKFK 188
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Query: 287 VTTGEENETVLFEQRAKLYRF-VD-KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKIC 344
V T EE+E VL++ RAKL+RF D KEWKERG G K LKNK T KVR+LMRRD KIC
Sbjct: 76 VKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKIC 135
Query: 345 ANHFLHQDMELKPMSNTKQAYIW 367
ANH + + LKP + +++++
Sbjct: 136 ANHIIAPEYTLKPNVGSDRSWVY 158
>sp|Q09717|RANG_SCHPO Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sbp1 PE=1 SV=1
Length = 215
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 12/163 (7%)
Query: 146 ANESDDETPAN-DHDPLP-----DFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRF--V 197
A+ +D++ PA D D P F+PI+ L V T EE ETV F+ RAKL+RF
Sbjct: 51 ASTNDEKKPAEGDEDAEPASPEVHFEPIVKLS-AVETKTNEEEETVEFKMRAKLFRFDKA 109
Query: 198 DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW- 256
EWKERG G +LLK+K+TGK RL+MRRD K+CANH L +M+L P + ++++W
Sbjct: 110 ASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWT 169
Query: 257 FAQDYADEVVSDEQLCAKFKLPEDAERFRS--VTTGEENETVL 297
A D ++ + E +F E+A F+ EEN +L
Sbjct: 170 VAADVSEGEPTAETFAIRFANSENANLFKENFEKYQEENAKIL 212
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 9/99 (9%)
Query: 298 FEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMEL 355
F+ RAKL+RF EWKERG G +LLK+K+TGK RL+MRRD K+CANH L +M+L
Sbjct: 97 FKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVMRRDKTLKVCANHLLMPEMKL 156
Query: 356 KPMSNTKQAYIW-FAQDYAD-----EVVSDRF-DSGNCN 387
P + ++++W A D ++ E + RF +S N N
Sbjct: 157 TPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENAN 195
>sp|Q54KD9|RANG_DICDI Ran-specific GTPase-activating protein homolog OS=Dictyostelium
discoideum GN=ranbp1 PE=1 SV=1
Length = 194
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
Query: 172 DEVPVTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDI 228
D V V T EENE LFE RAKLYRF +WKERG G ++ L++KD+ ++R++MRRD
Sbjct: 56 DVVEVKTNEENEDTLFEIRAKLYRFDTDPSPQWKERGTGNVRFLEDKDSKRIRVVMRRDK 115
Query: 229 VHKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVV---SDEQLCAKFKLPEDAERF 284
K+C NH + + L M + ++++W +D++DE +E +F PE+A F
Sbjct: 116 TLKVCLNHHISPALSLGEMTGSDKSWVWKCPKDFSDEEKPEGVEELFAIRFATPENAGLF 175
Query: 285 RS 286
++
Sbjct: 176 KT 177
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 287 VTTGEENETVLFEQRAKLYRFVDK---EWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKI 343
V T EENE LFE RAKLYRF +WKERG G ++ L++KD+ ++R++MRRD K+
Sbjct: 60 VKTNEENEDTLFEIRAKLYRFDTDPSPQWKERGTGNVRFLEDKDSKRIRVVMRRDKTLKV 119
Query: 344 CANHFLHQDMELKPMSNTKQAYIWFA-QDYADE 375
C NH + + L M+ + ++++W +D++DE
Sbjct: 120 CLNHHISPALSLGEMTGSDKSWVWKCPKDFSDE 152
>sp|Q9USL4|NUP61_SCHPO Nucleoporin nup61 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nup61 PE=1 SV=2
Length = 549
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 179 GEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANH 236
GEENE +FE RAK+YRF K + + G+G LK+ ++DTG R+L R + K+ N
Sbjct: 432 GEENEDSVFETRAKIYRFDATSKSYSDIGIGPLKINVDRDTGSARILARVEGSGKLLLNV 491
Query: 237 FLHQDMEL 244
L QD E
Sbjct: 492 RLCQDFEY 499
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 290 GEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANH 347
GEENE +FE RAK+YRF K + + G+G LK+ ++DTG R+L R + K+ N
Sbjct: 432 GEENEDSVFETRAKIYRFDATSKSYSDIGIGPLKINVDRDTGSARILARVEGSGKLLLNV 491
Query: 348 FLHQDMEL 355
L QD E
Sbjct: 492 RLCQDFEY 499
>sp|P32499|NUP2_YEAST Nucleoporin NUP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NUP2 PE=1 SV=2
Length = 720
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 179 GEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDT-GKVRLLMRRDIVHKICAN 235
GEE+E LF Q+AKL F K + RGVG++KLLK KD KVRLL R D + + N
Sbjct: 602 GEEDEVALFSQKAKLMTFNAETKSYDSRGVGEMKLLKKKDDPSKVRLLCRSDGMGNVLLN 661
Query: 236 HFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLC---AKFKLPEDAERF 284
+ + +P+ I A V +D +L KFK E+ F
Sbjct: 662 ATVVDSFKYEPLAPGNDNLIK-----APTVAADGKLVTYIVKFKQKEEGRSF 708
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 290 GEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNKDT-GKVRLLMRRDIVHKICAN 346
GEE+E LF Q+AKL F K + RGVG++KLLK KD KVRLL R D + + N
Sbjct: 602 GEEDEVALFSQKAKLMTFNAETKSYDSRGVGEMKLLKKKDDPSKVRLLCRSDGMGNVLLN 661
Query: 347 HFLHQDMELKPMS 359
+ + +P++
Sbjct: 662 ATVVDSFKYEPLA 674
>sp|Q09146|HBA1_SCHPO Brefeldin A resistance protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hba1 PE=1 SV=1
Length = 399
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 176 VTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLL--KNKDTGKVRLLMRRDIVHK 231
+ TGEE E +F RA+LY D K WKERG G LK+ K + +G RLLMR D VH+
Sbjct: 268 IITGEEEEESIFSVRARLYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMRNDAVHR 327
Query: 232 ICANHFLHQDMELKPM 247
+ N L Q M K +
Sbjct: 328 VIMNVPLFQGMSKKSL 343
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 287 VTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLL--KNKDTGKVRLLMRRDIVHK 342
+ TGEE E +F RA+LY D K WKERG G LK+ K + +G RLLMR D VH+
Sbjct: 268 IITGEEEEESIFSVRARLYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMRNDAVHR 327
Query: 343 ICANHFLHQDMELKPM 358
+ N L Q M K +
Sbjct: 328 VIMNVPLFQGMSKKSL 343
>sp|P40517|YRB2_YEAST Ran-specific GTPase-activating protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YRB2 PE=1
SV=1
Length = 327
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 285 RSVTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNK-DTGKVRLLMRRDIVH 341
+ V +GEE+E +++ AKLY+ + + WKERGVG +K+ K+K D K R++MR +
Sbjct: 203 QEVKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRGIL 262
Query: 342 KICAN 346
K+ N
Sbjct: 263 KVILN 267
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 176 VTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKLLKNK-DTGKVRLLMRRDIVHKI 232
V +GEE+E +++ AKLY+ + + WKERGVG +K+ K+K D K R++MR + K+
Sbjct: 205 VKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRGILKV 264
Query: 233 CAN 235
N
Sbjct: 265 ILN 267
>sp|Q8SSI6|YRB1_ENCCU Ran-specific GTPase-activating protein 1 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=YRB1 PE=1 SV=1
Length = 219
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 180 EENET--VLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICAN 235
EEN++ +LF+ R KLY F + K +ER G + + + + ++ M RD + ++ N
Sbjct: 85 EENQSDEILFKARCKLYYFSEETKALEERAEGTMIIEMHSKSNLAKITMFRDQIGRLGCN 144
Query: 236 HFLHQDMELKPMPNTKQAYIWFAQDYADEVVSD------EQLCAKFKLPEDAERF 284
HF++ + +P ++W + + D V +D + KF ED +RF
Sbjct: 145 HFINPRFKAQPHGKVSNGWMWMSTE--DTVETDALRKKIQLFVVKFYSEEDFKRF 197
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 291 EENET--VLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICAN 346
EEN++ +LF+ R KLY F + K +ER G + + + + ++ M RD + ++ N
Sbjct: 85 EENQSDEILFKARCKLYYFSEETKALEERAEGTMIIEMHSKSNLAKITMFRDQIGRLGCN 144
Query: 347 HFLHQDMELKPMSNTKQAYIWFA 369
HF++ + +P ++W +
Sbjct: 145 HFINPRFKAQPHGKVSNGWMWMS 167
>sp|Q5R4Y2|RANB3_PONAB Ran-binding protein 3 OS=Pongo abelii GN=RANBP3 PE=2 SV=1
Length = 494
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 170 LPDEVPVTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKL--LKNKDTGKV--RLL 223
L ++V V TGEE E+ + + + KL+ F + W ERG G L+L + + D G + RL+
Sbjct: 312 LLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLV 371
Query: 224 MRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQDYADEVV 266
MR ++ N L M++ ++++ A D D+VV
Sbjct: 372 MRTQGSLRLILNTKLWAQMQIDKA--SEKSIRITAMDTEDQVV 412
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 287 VTTGEENETVLFEQRAKLYRF--VDKEWKERGVGQLKL--LKNKDTGKV--RLLMRRDIV 340
V TGEE E+ + + + KL+ F + W ERG G L+L + + D G + RL+MR
Sbjct: 318 VITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGS 377
Query: 341 HKICANHFLHQDMELKPMSNTKQAYIWFAQDYADEVV 377
++ N L M++ S +++ A D D+VV
Sbjct: 378 LRLILNTKLWAQMQIDKAS--EKSIRITAMDTEDQVV 412
>sp|O08587|NUP50_RAT Nuclear pore complex protein Nup50 OS=Rattus norvegicus GN=Nup50
PE=2 SV=2
Length = 467
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 172 DEVP--VTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD 227
DE P V T + E + ++ KL+ D E+KE+GVG L LK T K +LL+R D
Sbjct: 341 DEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLH-LKPTATQKTQLLVRAD 397
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 285 RSVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD 338
+ V T + E + ++ KL+ D E+KE+GVG L LK T K +LL+R D
Sbjct: 345 KVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLH-LKPTATQKTQLLVRAD 397
>sp|Q9JIH2|NUP50_MOUSE Nuclear pore complex protein Nup50 OS=Mus musculus GN=Nup50 PE=1
SV=3
Length = 466
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 172 DEVP--VTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRD 227
DE P V T + E + ++ KL+ D E+KE+GVG L LK T K +LL+R D
Sbjct: 340 DEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLH-LKPTATQKTQLLVRAD 396
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 272 CAKFKLPEDAERFRSVTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKV 331
C + E+ E + V T + E + ++ KL+ D E+KE+GVG L LK T K
Sbjct: 331 CRDGEEEENDEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLH-LKPTATQKT 389
Query: 332 RLLMRRD 338
+LL+R D
Sbjct: 390 QLLVRAD 396
>sp|Q9UL36|ZN236_HUMAN Zinc finger protein 236 OS=Homo sapiens GN=ZNF236 PE=2 SV=2
Length = 1845
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 8 PTGPPPQLSSTTPTSSNATKIPPTSTSTADVKSFGSPAQ--LTSSPLGVSTTGTANSTPI 65
P+G P +++ T SS + + + TA S GSP + LT S L ++ ++TP+
Sbjct: 1486 PSGGPHEITLTINNSSLSQVLAQAAGPTA-TSSSGSPQEITLTISELNTTSGSLPSTTPM 1544
Query: 66 KPSANTSLGGQLNTSQIGGN-------LNTSGQIGGPLNT 98
PSA ++ +++S +GG+ +T G + G L+T
Sbjct: 1545 SPSAISTQNLVMSSSGVGGDASVTLTLADTQGMLSGGLDT 1584
>sp|Q7Z5P9|MUC19_HUMAN Mucin-19 OS=Homo sapiens GN=MUC19 PE=1 SV=2
Length = 6254
Score = 32.7 bits (73), Expect = 4.6, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 8/110 (7%)
Query: 9 TGPPPQLSSTTPTSSNATKIPPTSTSTADVK----SFGSPAQLTSSPLGVSTTGTANSTP 64
TG QL+ T TSS + + TS +A V SF T PL S T + P
Sbjct: 2018 TGTSGQLAGVTGTSSKSAGVTVTSEKSAGVAVITGSFVERPVTTGPPLLESET----TRP 2073
Query: 65 IKPSANTSLGGQLNTSQIGGNLNTSGQIGGPLNTSGQLNSSQTGSGQTTP 114
TS T +G + +G G SG S GSG T P
Sbjct: 2074 SGGVTVTSGQSARVTETVGASAGVTGTTGPSTEGSGATGPSVVGSGTTRP 2123
>sp|A2T929|RXRAA_DANRE Retinoic acid receptor RXR-alpha-A OS=Danio rerio GN=rxraa PE=2
SV=2
Length = 430
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 13 PQLSSTTPTSSNATKIPPTSTSTADVKSFGSPAQLTSSPLG---VSTTGTANSTPIKPSA 69
P L S T + + P ST ++ + GSP + SSP+G +++ G I P
Sbjct: 3 PSLLSPTSLGPSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGVGYGPSISPQL 62
Query: 70 NTSLGGQLNTSQIGGNLNTSGQIGGPLNTSG 100
N+ + ++ I L +G + P SG
Sbjct: 63 NSHMNSVSSSEDIKPPLGLNGVMKVPAQPSG 93
>sp|A7TSV7|PAN1_VANPO Actin cytoskeleton-regulatory complex protein PAN1
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=PAN1 PE=3 SV=1
Length = 1492
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 2 ATIKPIPTGPPPQLSSTTPTSSNATK--IPPTSTSTADVKSFGSPAQLTSSPLGVSTTGT 59
+ ++P TG P S P + T + P +T SFG P Q+T PL TTG
Sbjct: 442 SVLQPQATGMIPATSFGVPLQNQMTGGMLNPQATGMMPQTSFGMPMQVTGGPLLSQTTGG 501
Query: 60 A---NSTPIKPSANTSLGGQLNTSQIGGNL 86
A +T PS TS G L T GG +
Sbjct: 502 ALQPQTTGFMPS--TSFGMPLQTQITGGAM 529
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 152,742,978
Number of Sequences: 539616
Number of extensions: 6879103
Number of successful extensions: 29308
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 526
Number of HSP's that attempted gapping in prelim test: 24406
Number of HSP's gapped (non-prelim): 3851
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)