Query psy15646
Match_columns 388
No_of_seqs 265 out of 768
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 17:59:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rrp_B Nuclear pore complex pr 100.0 2E-43 6.8E-48 308.7 14.8 124 163-286 1-126 (134)
2 3m1i_B RAN-specific GTPase-act 100.0 1.1E-42 3.9E-47 320.1 13.9 134 152-286 43-179 (191)
3 4hat_B RAN-specific GTPase-act 100.0 1.2E-42 4.2E-47 306.4 13.0 124 162-286 2-128 (140)
4 1k5d_B RAN-specific GTPase-act 100.0 1.1E-41 3.7E-46 316.2 13.8 133 153-286 16-153 (201)
5 1xke_A RAN-binding protein 2; 100.0 1E-37 3.5E-42 271.4 13.9 110 177-286 1-112 (130)
6 2crf_A RAN binding protein 3; 100.0 3E-35 1E-39 261.8 13.4 118 165-286 8-131 (150)
7 3n7c_A ABR034WP; nuclear pore 100.0 2.8E-35 9.5E-40 256.5 11.1 110 174-286 1-113 (130)
8 2y8g_A Ranbp3-B, RAN-binding p 100.0 2.3E-34 7.7E-39 252.9 11.1 110 173-286 4-119 (138)
9 2ec1_A Nucleoporin 50 kDa; ran 100.0 9.8E-34 3.3E-38 245.1 10.9 109 176-286 5-117 (125)
10 1xke_A RAN-binding protein 2; 100.0 7.5E-32 2.6E-36 234.4 11.8 99 288-386 1-107 (130)
11 4hat_B RAN-specific GTPase-act 100.0 3E-32 1E-36 240.2 8.8 102 285-386 13-123 (140)
12 1rrp_B Nuclear pore complex pr 100.0 4.1E-32 1.4E-36 237.1 8.6 101 286-386 13-121 (134)
13 3m1i_B RAN-specific GTPase-act 100.0 4.9E-31 1.7E-35 242.7 9.4 102 285-386 64-174 (191)
14 1k5d_B RAN-specific GTPase-act 100.0 9.3E-31 3.2E-35 242.9 9.2 101 286-386 37-148 (201)
15 3n7c_A ABR034WP; nuclear pore 100.0 7.2E-30 2.5E-34 222.4 6.9 100 286-386 2-108 (130)
16 2y8g_A Ranbp3-B, RAN-binding p 100.0 1.4E-29 4.8E-34 222.4 8.7 96 286-383 6-110 (138)
17 2crf_A RAN binding protein 3; 100.0 3.7E-29 1.3E-33 222.6 10.6 96 286-383 18-122 (150)
18 2ec1_A Nucleoporin 50 kDa; ran 100.0 3.8E-29 1.3E-33 216.4 6.6 98 287-386 5-112 (125)
19 1qc6_A EVH1 domain from ENA/VA 99.4 9.3E-13 3.2E-17 114.2 11.2 95 182-286 2-103 (130)
20 1qc6_A EVH1 domain from ENA/VA 99.2 6.5E-11 2.2E-15 102.6 8.4 87 293-381 2-101 (130)
21 1ddw_A GLGF-domain protein hom 99.0 3.4E-09 1.1E-13 91.0 12.0 95 182-286 2-101 (120)
22 1i2h_A PSD-ZIP45(homer-1C/VESL 98.9 1E-08 3.5E-13 92.7 10.2 95 182-286 7-106 (168)
23 1egx_A VAsp, vasodilator-stimu 98.4 8.2E-07 2.8E-11 75.5 9.5 94 183-286 3-104 (115)
24 1evh_A WH1 domain, protein (ME 98.4 1.1E-06 3.7E-11 74.4 10.1 95 182-286 2-102 (112)
25 1ddw_A GLGF-domain protein hom 98.4 8.4E-07 2.9E-11 76.1 9.5 72 293-368 2-78 (120)
26 1i2h_A PSD-ZIP45(homer-1C/VESL 98.4 6.8E-07 2.3E-11 80.8 8.4 73 293-369 7-84 (168)
27 2jp2_A Spred-2, sprouty-relate 98.1 2E-05 7E-10 68.0 10.0 96 181-286 10-115 (126)
28 1xod_A Spred1; sprouty, EVH1, 98.1 1.1E-05 3.8E-10 68.8 8.2 95 182-286 2-106 (118)
29 1evh_A WH1 domain, protein (ME 98.0 1.5E-05 5.1E-10 67.4 8.7 87 293-381 2-100 (112)
30 1egx_A VAsp, vasodilator-stimu 98.0 1.4E-05 4.8E-10 67.9 8.3 86 294-381 3-102 (115)
31 2jp2_A Spred-2, sprouty-relate 97.6 0.00022 7.7E-09 61.5 9.1 90 290-381 8-113 (126)
32 1xod_A Spred1; sprouty, EVH1, 97.6 0.00014 4.9E-09 61.9 7.7 87 293-381 2-104 (118)
33 3syx_A Sprouty-related, EVH1 d 97.1 0.0031 1E-07 54.8 10.2 92 185-286 12-113 (130)
34 3syx_A Sprouty-related, EVH1 d 94.6 0.11 3.6E-06 45.1 7.8 71 296-368 12-92 (130)
35 1mke_A WIP - N-WAsp, fusion pr 94.1 0.94 3.2E-05 40.1 13.1 91 184-286 41-134 (152)
36 2ifs_A N-WAsp, wiskott-aldrich 93.4 0.47 1.6E-05 42.7 9.9 91 184-286 58-151 (169)
37 1mke_A WIP - N-WAsp, fusion pr 89.6 0.9 3.1E-05 40.2 7.4 83 295-381 41-132 (152)
38 2ifs_A N-WAsp, wiskott-aldrich 88.9 0.87 3E-05 40.9 6.8 82 296-381 59-149 (169)
39 2lyd_A Decapping protein 1; DC 54.8 42 0.0015 28.7 7.7 63 300-367 36-102 (134)
40 2lyd_A Decapping protein 1; DC 52.6 1.1E+02 0.0037 26.1 11.8 89 184-284 30-123 (134)
41 2qkl_A DCP1 protein, SPBC3B9.2 34.5 1.1E+02 0.0036 26.0 6.9 62 300-367 31-96 (127)
42 2oqb_A Histone-arginine methyl 26.8 2.9E+02 0.0098 23.3 8.8 41 236-286 60-100 (117)
43 2qkl_A DCP1 protein, SPBC3B9.2 23.8 1.8E+02 0.0062 24.5 6.5 88 184-284 25-117 (127)
44 1tqz_A Necap1; endocytosis, st 20.8 3.1E+02 0.011 23.5 7.4 100 181-285 6-120 (133)
No 1
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=2e-43 Score=308.67 Aligned_cols=124 Identities=52% Similarity=0.999 Sum_probs=120.4
Q ss_pred CceeccCCCCccccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCCCCcEEEEEEeCCeeeeEeccccCc
Q psy15646 163 DFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQ 240 (388)
Q Consensus 163 ~f~Piv~LP~~vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~~ 240 (388)
||+|||+||++|+|+||||||++||+.|||||+|++ ++|+|||+|.||||+|++++++|||||+|+++||||||+|++
T Consensus 1 ~~~pi~~l~~~vev~tGEE~E~~lf~~raKL~~~~~~~~~WkerG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~ 80 (134)
T 1rrp_B 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISP 80 (134)
T ss_dssp CCCCSSCCCCCCCCCCSCCSEEEEEEEEEEEEEECSSSSCEEEEEEEEEEEEEESSSCCCEEEEECTTTCCEEECCBCCS
T ss_pred CcccceECCceEeecCCCcCeEEEEEEEEEEEEEcccCCCcccCcEEEEEEEEECCCCeEEEEEEEcCCCcEEEEeEecC
Confidence 799999999999999999999999999999999974 899999999999999999999999999999999999999999
Q ss_pred CceEeecCCCCcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 241 DMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 241 ~M~~~~~~~s~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+|+++++.+++++|+|++.|++|+++++++|+|||+++|.|++|+.
T Consensus 81 ~m~~~~~~~s~~~~~~~~~d~~d~~~k~~~~~irfk~~e~A~~f~~ 126 (134)
T 1rrp_B 81 DMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKC 126 (134)
T ss_dssp SCCCBCSTTCTTEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHH
T ss_pred CceEeecCCCCeEEEEEcccccCCCCceEEEEEEECCHHHHHHHHH
Confidence 9999999889999999999999999999999999999999999975
No 2
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-42 Score=320.11 Aligned_cols=134 Identities=42% Similarity=0.709 Sum_probs=111.5
Q ss_pred CCCCCCCCCCCCceeccCCCCccccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCCCCcEEEEEEeCCe
Q psy15646 152 ETPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIV 229 (388)
Q Consensus 152 ~~~~ee~~~~~~f~Piv~LP~~vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~tgk~RLLMRrdqv 229 (388)
+++++|+++.+||+|||+| ++|+|+||||||++||++|||||+|+. ++|+|||+|+||||+|++++++|||||+|++
T Consensus 43 ~~~~~ee~~~~~f~Pvv~L-~~vev~tGEEdEe~lf~~RaKLf~f~~~~~~WKERGvG~lkilk~ket~k~RllMR~d~~ 121 (191)
T 3m1i_B 43 EGDDAPESPDIHFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKT 121 (191)
T ss_dssp ------------------C-CCCCCCCSCTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTT
T ss_pred cccccccCCCCCcccceec-ccccccCCCcceeeeeEEeeEEEEEecCCCCccceeEEEEEEEEcCCCCeEEEEEEecCc
Confidence 4455677888999999999 579999999999999999999999985 7899999999999999999999999999999
Q ss_pred eeeEeccccCcCceEeecCCCCcEEEEEe-ecCCccccccceeeeecCChhhHHhhcc
Q psy15646 230 HKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 230 ~KV~lN~~I~~~M~~~~~~~s~ks~~w~a-~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+||||||+|+++|+++++.+++++|+|++ .||+|+++++++|+|||+++++|++|+.
T Consensus 122 ~kV~LN~~I~~~m~~~~~~~sdks~v~~~~~D~sdge~k~e~~aIRFk~~E~A~eF~~ 179 (191)
T 3m1i_B 122 LKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKE 179 (191)
T ss_dssp CCEEEEEECCTTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHH
T ss_pred ceEEEeeecCCCcEEeECCCCCceEEEEecCcCCCCCcceEEEEEEECCHHHHHHHHH
Confidence 99999999999999999988899999997 7999998899999999999999999985
No 3
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=100.00 E-value=1.2e-42 Score=306.38 Aligned_cols=124 Identities=44% Similarity=0.755 Sum_probs=102.9
Q ss_pred CCceeccCCCCccccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCCCCcEEEEEEeCCeeeeEeccccC
Q psy15646 162 PDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLH 239 (388)
Q Consensus 162 ~~f~Piv~LP~~vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~ 239 (388)
+||+|||+| ++|+|+||||||++||+.|||||+|++ ++|||||+|+||||+|+++|++|||||+|+++||||||+|+
T Consensus 2 ~~f~pvv~l-~~vev~tGEE~E~~lf~~raKLf~f~~~~~~WkerG~G~lkilk~k~~~k~RllmR~d~~~kv~lN~~i~ 80 (140)
T 4hat_B 2 IHFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRFDKDAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIA 80 (140)
T ss_dssp ------------------CTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECC
T ss_pred CcccceeEc-ceecccCCCcCeeEEEEEeEEEEEEcCCCCCcccccEEEEEEEEcCCCCeEEEEEEecCcceEEEEeEec
Confidence 599999999 589999999999999999999999984 78999999999999999999999999999999999999999
Q ss_pred cCceEeecCCCCcEEEEEe-ecCCccccccceeeeecCChhhHHhhcc
Q psy15646 240 QDMELKPMPNTKQAYIWFA-QDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 240 ~~M~~~~~~~s~ks~~w~a-~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
++|+++++.+++++|+|++ .||+|+++++++|+|||+++|.|++|+.
T Consensus 81 ~~m~~~~~~~s~k~~v~~~~~D~sdg~~~~~~~~iRfk~~e~A~~f~~ 128 (140)
T 4hat_B 81 PEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKE 128 (140)
T ss_dssp TTCCCBCCTTCSSEEEEEEEEECTTSSCEEEEEEEEESSHHHHHHHHH
T ss_pred CCeEEeEcCCCCceEEEEccccCCCCCCceEEEEEEECCHHHHHHHHH
Confidence 9999999988899999985 7999998999999999999999999985
No 4
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=100.00 E-value=1.1e-41 Score=316.21 Aligned_cols=133 Identities=46% Similarity=0.828 Sum_probs=120.9
Q ss_pred CCCCCCCCCCCceeccCCCCccccccCccccEEEEEEeeeEEee--c--ccccceeeeEEEEEEEeCCCCcEEEEEEeCC
Q psy15646 153 TPANDHDPLPDFKPIIPLPDEVPVTTGEENETVLFEQRAKLYRF--V--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDI 228 (388)
Q Consensus 153 ~~~ee~~~~~~f~Piv~LP~~vev~TGEEdEe~lF~~RaKLyrf--~--~k~WKERGvG~LKIlk~k~tgk~RLLMRrdq 228 (388)
+.++|+++.+||+|||+||+ ++|+||||||++||+.|||||+| + .++|||||+|.||||+|++++++|||||+|+
T Consensus 16 ~~~~~~~~~~~f~Piv~L~~-vev~TGEEdEe~lf~~RaKLf~f~~d~~~~~WKERGvG~lkIlk~k~t~k~RlvMR~d~ 94 (201)
T 1k5d_B 16 ENTDESNHDPQFEPIVSLPE-QEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDK 94 (201)
T ss_dssp ------CCCCCCCCSCCCCC-CCCCCSCSSCCCSEEEEEEEEEECCTTSSCCEEEEEEEEEEEEECSSSCCEEEEEEETT
T ss_pred ccccccCCCCcccccccccc-ccccCCCccceEEEEEeeeEEEecccccCCCccccceEEEEEEEcCCCCcEEEEEEECC
Confidence 34456777789999999986 69999999999999999999999 3 3899999999999999999999999999999
Q ss_pred eeeeEeccccCcCceEeecCCCCcEEEEEe-ecCCccccccceeeeecCChhhHHhhcc
Q psy15646 229 VHKICANHFLHQDMELKPMPNTKQAYIWFA-QDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 229 v~KV~lN~~I~~~M~~~~~~~s~ks~~w~a-~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
++||||||+|+++|+++++.+++++|+|++ .||+|++.++++|+|||+++++|++|+.
T Consensus 95 ~~kV~LN~~I~~~m~~~~~~~s~ks~v~~~~~d~ad~~~k~e~~~iRfks~e~A~~f~~ 153 (201)
T 1k5d_B 95 TLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKT 153 (201)
T ss_dssp TCCEEEEEECCSSCCCCBCSSCSSEEEEEEEEECTTSSCEEEEEEEECSSHHHHHHHHH
T ss_pred cceEEEeeEecCCceeeecCCCCceEEEEeccccCCCCCceEEEEEEECCHHHHHHHHH
Confidence 999999999999999999988999999987 8999999999999999999999999973
No 5
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=1e-37 Score=271.41 Aligned_cols=110 Identities=52% Similarity=0.942 Sum_probs=106.2
Q ss_pred ccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCCCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEE
Q psy15646 177 TTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 254 (388)
Q Consensus 177 ~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~ 254 (388)
.||||||++||+.|||||+|++ ++|||||+|+||||+|++++++|||||+|+++||||||+|+++|+++++.+++++|
T Consensus 1 gtGEE~E~~l~~~raKL~~~~~~~~~WkERG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~ 80 (130)
T 1xke_A 1 GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAW 80 (130)
T ss_dssp CCSSSCEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTSSCEEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCE
T ss_pred CCCCcceEEEEEEEEEEEEEcCCCCCcccCcEEEEEEEEcCCCCeEEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEE
Confidence 4899999999999999999975 89999999999999999999999999999999999999999999999998899999
Q ss_pred EEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 255 ~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+|++.||+|++.++++|+|||+++|+|++|+.
T Consensus 81 ~~~~~d~~d~~~~~~~~~irfks~e~a~~f~~ 112 (130)
T 1xke_A 81 MWLASDFSDGDAKLEQLAAKFKTPELAEEFKQ 112 (130)
T ss_dssp EEEEEECSSSCSEEEEEEEECSSHHHHHHHHH
T ss_pred EEEecccCCCCCceEEEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999975
No 6
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=3e-35 Score=261.82 Aligned_cols=118 Identities=25% Similarity=0.336 Sum_probs=106.7
Q ss_pred eeccCCCCccccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeC----CCCcEEEEEEeCCeeeeEecccc
Q psy15646 165 KPIIPLPDEVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNK----DTGKVRLLMRRDIVHKICANHFL 238 (388)
Q Consensus 165 ~Piv~LP~~vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k----~tgk~RLLMRrdqv~KV~lN~~I 238 (388)
.|+.++|++|+|+||||||++||++|||||+|++ ++|||||+|+||||+|+ .++++|||||+|+++||||||+|
T Consensus 8 ~~~~~~l~~vev~tGEE~E~~l~~~raKL~~fd~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i 87 (150)
T 2crf_A 8 TARKCLLEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKL 87 (150)
T ss_dssp SSCCSCSSCTTTSCCCCCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEEC
T ss_pred CccccCcccccccCCCcCeEEEEEEEeEEEEEcCCCCCcccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeec
Confidence 4466788899999999999999999999999975 89999999999999987 25789999999999999999999
Q ss_pred CcCceEeecCCCCcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 239 HQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 239 ~~~M~~~~~~~s~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+++|+++.+ ++++|+|.+.|++|+ .+++|+|||+++|+|+.|+.
T Consensus 88 ~~~m~~~~~--~~k~~~~~~~d~~d~--~~~~~lirfk~~e~a~lf~~ 131 (150)
T 2crf_A 88 WAQMQIDKA--SEKSIHITAMDTEDQ--GVKVFLISASSKDTGQLYAA 131 (150)
T ss_dssp CTTCCEECC--SSSEEEEEEEBSSSC--CEEEEEEECCHHHHHHHHHH
T ss_pred cCCceeecC--CCCEEEEEeecCCCC--ceEEEEEEECCHHHHHHHHH
Confidence 999999854 688999999998665 47799999999999999974
No 7
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=100.00 E-value=2.8e-35 Score=256.51 Aligned_cols=110 Identities=35% Similarity=0.507 Sum_probs=91.1
Q ss_pred cccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCC-CCcEEEEEEeCCeeeeEeccccCcCceEeecCCC
Q psy15646 174 VPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKD-TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNT 250 (388)
Q Consensus 174 vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~-tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s 250 (388)
|||+||||||++||+.|||||+|++ ++|||||+|+||||++++ ++++|||||+|+++|||||++|+++|+++++.++
T Consensus 1 iev~tGEE~E~~lf~~raKL~~f~~~~~~WkerG~G~lkil~~k~~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~ 80 (130)
T 3n7c_A 1 MSLTNGEENEEVLFCEKAKLLIFDSDTKGYTSRGVGELKLLRKKDDKGKVRVLCRSEGMGHVLLNTSVVKSFKYQPIDAD 80 (130)
T ss_dssp ---------CEEEEEEEEEEEEECC---CEEEEEEEEEEEEEETTEEEEEEEEEEC-CCCCEEEEEECCTTBCCEESCTT
T ss_pred CcccCCCcCeeEEEEEEEEEEEEeCCCCCchhcceEEEEEEEecCCCCEEEEEEEecCCceEEeeccccCCcEEeEcCCC
Confidence 6899999999999999999999976 689999999999999995 8999999999999999999999999999999877
Q ss_pred CcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 251 KQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 251 ~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+++|+|++. + +++++++|+|||+++|+|++|+.
T Consensus 81 ~~~~v~~~~-~--~dgk~~~~~lrfks~e~A~~f~~ 113 (130)
T 3n7c_A 81 NENLIKWPI-I--TDGKLETFIIKVKQKADGRRLVG 113 (130)
T ss_dssp CTTEEEEEE-E--ETTEEEEEEEECSSHHHHHHHHH
T ss_pred CccEEEEEe-c--CCCceEEEEEEECCHHHHHHHHH
Confidence 888998764 3 34579999999999999999974
No 8
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=100.00 E-value=2.3e-34 Score=252.94 Aligned_cols=110 Identities=24% Similarity=0.327 Sum_probs=89.8
Q ss_pred ccccccCccccEEEEEEeeeEEeecc--cccceeeeEEEEEEEeCC----CCcEEEEEEeCCeeeeEeccccCcCceEee
Q psy15646 173 EVPVTTGEENETVLFEQRAKLYRFVD--KEWKERGVGQLKLLKNKD----TGKVRLLMRRDIVHKICANHFLHQDMELKP 246 (388)
Q Consensus 173 ~vev~TGEEdEe~lF~~RaKLyrf~~--k~WKERGvG~LKIlk~k~----tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~ 246 (388)
+|+|+||||||++||++|||||+|++ ++|||||+|+||||+|+. ++++|||||+|+++||||||+|+++|+++.
T Consensus 4 ~v~v~tGEE~E~~~~~~raKL~~f~~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~ 83 (138)
T 2y8g_A 4 KVEVITGEEAESNVLQMQCKLFVFDKTSQSWVAVGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDK 83 (138)
T ss_dssp ----------CEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEECTTTCCEEEEEEEEETTTCCEEEEEECCTTCCEEE
T ss_pred cccccCCCcCcEEEEEEEeEEEEEecCCCCchhceEEEEEEEEeccCCCCCccEEEEEEEcCcceEEEeeEecCCceeec
Confidence 68999999999999999999999986 799999999999999973 478999999999999999999999999987
Q ss_pred cCCCCcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 247 MPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 247 ~~~s~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
+ ++++|+|.+.|++|++ +++|+|||+++|.|+.|+.
T Consensus 84 ~--~~k~~~~~~~d~~d~~--~~~~lirfk~~e~a~lf~~ 119 (138)
T 2y8g_A 84 A--SEKSIRITAMDTEDQG--VKVFLISASSKDTGQLYAA 119 (138)
T ss_dssp E--ETTEEEEECCC--CCC--CCEEEEECCHHHHHHHHHH
T ss_pred C--CCCEEEEEEecCCCCc--eEEEEEEECCHHHHHHHHH
Confidence 5 5789999999986654 6799999999999999974
No 9
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=9.8e-34 Score=245.12 Aligned_cols=109 Identities=24% Similarity=0.359 Sum_probs=95.3
Q ss_pred cccCccccEEEEEEeeeEEeecccccceeeeEEEEEEEeCCCCcEEEEEEeCCe-eeeEeccccCcCceEeecCCCCcEE
Q psy15646 176 VTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIV-HKICANHFLHQDMELKPMPNTKQAY 254 (388)
Q Consensus 176 v~TGEEdEe~lF~~RaKLyrf~~k~WKERGvG~LKIlk~k~tgk~RLLMRrdqv-~KV~lN~~I~~~M~~~~~~~s~ks~ 254 (388)
..||||||++||++|||||+|++++|||||+|+|||++++ ++++|||||+|++ +||||||+|+++|+++++ ++++.|
T Consensus 5 ~~tgEE~E~~lf~~raKLf~~~~~~WkERGvG~lki~~~k-~~k~RllmR~d~~~~kv~lN~~i~~~m~~~~~-g~~~~~ 82 (125)
T 2ec1_A 5 SSGEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTA-NQKTQLLVRADTNLGNILLNVLIPPNMPCTRT-GKNNVL 82 (125)
T ss_dssp ---CCCCCSCSEEEEEEEEEECSSSEEEEEEEEEEEEECS-SSSEEEEEEESSSSCCBSCCEECCSSCCEECC-TTTEEE
T ss_pred CcCCccCceeEEEEeeEEEEecCCCcccccEEEEEeeecC-CCcEEEEEEecCCCCEEEEeeEEcCCCeEEec-CCCcEE
Confidence 4799999999999999999999999999999999999886 7899999999985 899999999999999998 567788
Q ss_pred EEEe-ecCCccc--cccceeeeecCChhhHHhhcc
Q psy15646 255 IWFA-QDYADEV--VSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 255 ~w~a-~D~aDee--~k~et~~IRFKt~e~A~eFks 286 (388)
+|+. .+++|++ .++++|+|||+++|+|++|+.
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~ 117 (125)
T 2ec1_A 83 IVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHK 117 (125)
T ss_dssp EEECCSSCSCSSSSSSCEEEEEECSSHHHHHHHHH
T ss_pred EEEccCCcccCCCCCceEEEEEEECCHHHHHHHHH
Confidence 8853 3344765 469999999999999999975
No 10
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=99.97 E-value=7.5e-32 Score=234.44 Aligned_cols=99 Identities=47% Similarity=0.925 Sum_probs=90.9
Q ss_pred cccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEE
Q psy15646 288 TTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAY 365 (388)
Q Consensus 288 ~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~ 365 (388)
.+|||||++||++|||||+|+ +++|+|||+|+||||+|++++++|||||+|+++||||||+|+++|+|+++.+++++|
T Consensus 1 gtGEE~E~~l~~~raKL~~~~~~~~~WkERG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~~~ 80 (130)
T 1xke_A 1 GSGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAW 80 (130)
T ss_dssp CCSSSCEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTSSCEEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCE
T ss_pred CCCCcceEEEEEEEEEEEEEcCCCCCcccCcEEEEEEEEcCCCCeEEEEEEEcCCCeEEEecEeCCCcEEeecCCCCeEE
Confidence 489999999999999999997 479999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecCcccc--cc---ccCC-CCC
Q psy15646 366 IWFAQDYADEVV--SD---RFDS-GNC 386 (388)
Q Consensus 366 ~w~a~D~sdg~~--~~---~f~~-~~~ 386 (388)
+|++.||+||+. .. ||++ +++
T Consensus 81 ~~~~~d~~d~~~~~~~~~irfks~e~a 107 (130)
T 1xke_A 81 MWLASDFSDGDAKLEQLAAKFKTPELA 107 (130)
T ss_dssp EEEEEECSSSCSEEEEEEEECSSHHHH
T ss_pred EEEecccCCCCCceEEEEEEECCHHHH
Confidence 999999999763 22 8874 543
No 11
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=99.97 E-value=3e-32 Score=240.21 Aligned_cols=102 Identities=49% Similarity=0.774 Sum_probs=88.2
Q ss_pred ccccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCC
Q psy15646 285 RSVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTK 362 (388)
Q Consensus 285 ksV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~ 362 (388)
.+|++|||||++||++|||||+|+ +++|+|||+|+||||+|++++++|||||+|+++||||||+|+++|+++++.+++
T Consensus 13 vev~tGEE~E~~lf~~raKLf~f~~~~~~WkerG~G~lkilk~k~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~s~ 92 (140)
T 4hat_B 13 VDVKTMEEDEEVLYKVRAKLFRFDKDAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSD 92 (140)
T ss_dssp ------CTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCS
T ss_pred ecccCCCcCeeEEEEEeEEEEEEcCCCCCcccccEEEEEEEEcCCCCeEEEEEEecCcceEEEEeEecCCeEEeEcCCCC
Confidence 368999999999999999999998 568999999999999999999999999999999999999999999999998889
Q ss_pred cEEEEE-eeecCccccc-----cccCC-CCC
Q psy15646 363 QAYIWF-AQDYADEVVS-----DRFDS-GNC 386 (388)
Q Consensus 363 k~~~w~-a~D~sdg~~~-----~~f~~-~~~ 386 (388)
++|+|+ +.||+||+.. -||+. +++
T Consensus 93 k~~v~~~~~D~sdg~~~~~~~~iRfk~~e~A 123 (140)
T 4hat_B 93 RSWVYACTADIAEGEAEAFTFAIRFGSKENA 123 (140)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEEESSHHHH
T ss_pred ceEEEEccccCCCCCCceEEEEEEECCHHHH
Confidence 999997 6899998632 29984 543
No 12
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=99.97 E-value=4.1e-32 Score=237.10 Aligned_cols=101 Identities=51% Similarity=0.978 Sum_probs=93.0
Q ss_pred cccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCc
Q psy15646 286 SVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQ 363 (388)
Q Consensus 286 sV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k 363 (388)
+|++|||||++||++|||||+|+ +++|+|||+|+||||+|++++++|||||+|+++||||||+|+++|+++++.++++
T Consensus 13 ev~tGEE~E~~lf~~raKL~~~~~~~~~WkerG~G~lkil~~k~~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~s~~ 92 (134)
T 1rrp_B 13 EVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDR 92 (134)
T ss_dssp CCCCSCCSEEEEEEEEEEEEEECSSSSCEEEEEEEEEEEEEESSSCCCEEEEECTTTCCEEECCBCCSSCCCBCSTTCTT
T ss_pred eecCCCcCeEEEEEEEEEEEEEcccCCCcccCcEEEEEEEEECCCCeEEEEEEEcCCCcEEEEeEecCCceEeecCCCCe
Confidence 68999999999999999999997 5799999999999999999999999999999999999999999999999988999
Q ss_pred EEEEEeeecCcccc--cc---ccCC-CCC
Q psy15646 364 AYIWFAQDYADEVV--SD---RFDS-GNC 386 (388)
Q Consensus 364 ~~~w~a~D~sdg~~--~~---~f~~-~~~ 386 (388)
+|+|++.||+|++. .. ||+. ++|
T Consensus 93 ~~~~~~~d~~d~~~k~~~~~irfk~~e~A 121 (134)
T 1rrp_B 93 SFVWHALDYADELPKPEQLAIRFKTPEEA 121 (134)
T ss_dssp EEEEEEEECTTSSCEEEEEEEECSSHHHH
T ss_pred EEEEEcccccCCCCceEEEEEEECCHHHH
Confidence 99999999998653 22 8984 554
No 13
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-31 Score=242.75 Aligned_cols=102 Identities=49% Similarity=0.777 Sum_probs=93.1
Q ss_pred ccccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCC
Q psy15646 285 RSVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTK 362 (388)
Q Consensus 285 ksV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~ 362 (388)
.+|++|||||++||++|||||+|+ .++|+|||+|+||||+|++++++|||||+|+++||||||+|+++|+|+++.+++
T Consensus 64 vev~tGEEdEe~lf~~RaKLf~f~~~~~~WKERGvG~lkilk~ket~k~RllMR~d~~~kV~LN~~I~~~m~~~~~~~sd 143 (191)
T 3m1i_B 64 VDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSD 143 (191)
T ss_dssp CCCCCSCTTEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEETTTCCEEEEEECTTTCCEEEEEECCTTCCCBCCTTCS
T ss_pred ccccCCCcceeeeeEEeeEEEEEecCCCCccceeEEEEEEEEcCCCCeEEEEEEecCcceEEEeeecCCCcEEeECCCCC
Confidence 378999999999999999999998 468999999999999999999999999999999999999999999999998889
Q ss_pred cEEEEEe-eecCcccc-----ccccCC-CCC
Q psy15646 363 QAYIWFA-QDYADEVV-----SDRFDS-GNC 386 (388)
Q Consensus 363 k~~~w~a-~D~sdg~~-----~~~f~~-~~~ 386 (388)
++|+|++ .||+||++ .-||+. +++
T Consensus 144 ks~v~~~~~D~sdge~k~e~~aIRFk~~E~A 174 (191)
T 3m1i_B 144 RSWVYACTADIAEGEAEAFTFAIRFGSKENA 174 (191)
T ss_dssp SEEEEEEEEECTTSSCEEEEEEEECSSHHHH
T ss_pred ceEEEEecCcCCCCCcceEEEEEEECCHHHH
Confidence 9999985 79999973 229983 544
No 14
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=99.96 E-value=9.3e-31 Score=242.93 Aligned_cols=101 Identities=51% Similarity=0.859 Sum_probs=92.5
Q ss_pred cccccccccceeeeeeeeeeee--c--cccceeecceeEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCC
Q psy15646 286 SVTTGEENETVLFEQRAKLYRF--V--DKEWKERGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNT 361 (388)
Q Consensus 286 sV~tGEEdEe~lf~~RaKL~r~--d--~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~ 361 (388)
+|++|||||++||++|||||+| + .++|+|||+|+||||+|++++++|||||+|+++||||||+|+++|+|+++.++
T Consensus 37 ev~TGEEdEe~lf~~RaKLf~f~~d~~~~~WKERGvG~lkIlk~k~t~k~RlvMR~d~~~kV~LN~~I~~~m~~~~~~~s 116 (201)
T 1k5d_B 37 EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGS 116 (201)
T ss_dssp CCCCSCSSCCCSEEEEEEEEEECCTTSSCCEEEEEEEEEEEEECSSSCCEEEEEEETTTCCEEEEEECCSSCCCCBCSSC
T ss_pred cccCCCccceEEEEEeeeEEEecccccCCCccccceEEEEEEEcCCCCcEEEEEEECCcceEEEeeEecCCceeeecCCC
Confidence 6899999999999999999999 4 67999999999999999999999999999999999999999999999999889
Q ss_pred CcEEEEEe-eecCccccc-----cccCC-CCC
Q psy15646 362 KQAYIWFA-QDYADEVVS-----DRFDS-GNC 386 (388)
Q Consensus 362 ~k~~~w~a-~D~sdg~~~-----~~f~~-~~~ 386 (388)
+++|+|++ .||+||+.. -||+. ++|
T Consensus 117 ~ks~v~~~~~d~ad~~~k~e~~~iRfks~e~A 148 (201)
T 1k5d_B 117 DRAWVWNTHADFADECPKPELLAIRFLNAENA 148 (201)
T ss_dssp SSEEEEEEEEECTTSSCEEEEEEEECSSHHHH
T ss_pred CceEEEEeccccCCCCCceEEEEEEECCHHHH
Confidence 99999976 999998632 28974 554
No 15
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=99.96 E-value=7.2e-30 Score=222.36 Aligned_cols=100 Identities=35% Similarity=0.562 Sum_probs=79.9
Q ss_pred cccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCC-CCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCC
Q psy15646 286 SVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKD-TGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTK 362 (388)
Q Consensus 286 sV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~-t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~ 362 (388)
+|+||||||++||+.|||||+|+ +++|+|||+|+||||+|++ ++++|||||+|+++||||||+|+++|+|+++..++
T Consensus 2 ev~tGEE~E~~lf~~raKL~~f~~~~~~WkerG~G~lkil~~k~~~~k~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~ 81 (130)
T 3n7c_A 2 SLTNGEENEEVLFCEKAKLLIFDSDTKGYTSRGVGELKLLRKKDDKGKVRVLCRSEGMGHVLLNTSVVKSFKYQPIDADN 81 (130)
T ss_dssp --------CEEEEEEEEEEEEECC---CEEEEEEEEEEEEEETTEEEEEEEEEEC-CCCCEEEEEECCTTBCCEESCTTC
T ss_pred cccCCCcCeeEEEEEEEEEEEEeCCCCCchhcceEEEEEEEecCCCCEEEEEEEecCCceEEeeccccCCcEEeEcCCCC
Confidence 58999999999999999999997 4689999999999999995 89999999999999999999999999999988777
Q ss_pred cEEEEEeeecCcccccc---ccCC-CCC
Q psy15646 363 QAYIWFAQDYADEVVSD---RFDS-GNC 386 (388)
Q Consensus 363 k~~~w~a~D~sdg~~~~---~f~~-~~~ 386 (388)
+.|+|.+. ++||++.. ||++ ++|
T Consensus 82 ~~~v~~~~-~~dgk~~~~~lrfks~e~A 108 (130)
T 3n7c_A 82 ENLIKWPI-ITDGKLETFIIKVKQKADG 108 (130)
T ss_dssp TTEEEEEE-EETTEEEEEEEECSSHHHH
T ss_pred ccEEEEEe-cCCCceEEEEEEECCHHHH
Confidence 78888653 37888765 9984 554
No 16
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=99.96 E-value=1.4e-29 Score=222.45 Aligned_cols=96 Identities=28% Similarity=0.365 Sum_probs=77.9
Q ss_pred cccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcCC----CCcEEEEEEeCCCCcEEEceecCCCCeeeecC
Q psy15646 286 SVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNKD----TGKVRLLMRRDIVHKICANHFLHQDMELKPMS 359 (388)
Q Consensus 286 sV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k~----t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~ 359 (388)
+|.+|||||++||++|||||+|+ +++|+|||+|+||||+|+. ++++|||||+|+++||||||+|+++|+|..
T Consensus 6 ~v~tGEE~E~~~~~~raKL~~f~~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~-- 83 (138)
T 2y8g_A 6 EVITGEEAESNVLQMQCKLFVFDKTSQSWVAVGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDK-- 83 (138)
T ss_dssp --------CEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEECTTTCCEEEEEEEEETTTCCEEEEEECCTTCCEEE--
T ss_pred cccCCCcCcEEEEEEEeEEEEEecCCCCchhceEEEEEEEEeccCCCCCccEEEEEEEcCcceEEEeeEecCCceeec--
Confidence 58999999999999999999998 4789999999999999974 478999999999999999999999999997
Q ss_pred CCCcEEEEEeeecCcccccc---ccCC
Q psy15646 360 NTKQAYIWFAQDYADEVVSD---RFDS 383 (388)
Q Consensus 360 ~~~k~~~w~a~D~sdg~~~~---~f~~ 383 (388)
.++|+|+|+++|++||++.. ||+.
T Consensus 84 ~~~k~~~~~~~d~~d~~~~~~lirfk~ 110 (138)
T 2y8g_A 84 ASEKSIRITAMDTEDQGVKVFLISASS 110 (138)
T ss_dssp EETTEEEEECCC--CCCCCEEEEECCH
T ss_pred CCCCEEEEEEecCCCCceEEEEEEECC
Confidence 45789999999999987654 8873
No 17
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=99.96 E-value=3.7e-29 Score=222.62 Aligned_cols=96 Identities=30% Similarity=0.399 Sum_probs=87.4
Q ss_pred cccccccccceeeeeeeeeeeec--cccceeecceeEEEEEcC----CCCcEEEEEEeCCCCcEEEceecCCCCeeeecC
Q psy15646 286 SVTTGEENETVLFEQRAKLYRFV--DKEWKERGVGQLKLLKNK----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMS 359 (388)
Q Consensus 286 sV~tGEEdEe~lf~~RaKL~r~d--~~~WkERGvG~LkIl~~k----~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~ 359 (388)
+|.+|||||++||++|||||+|| +++|+|||+|+||||+|+ .++++|||||+|+++||||||+|+++|+|..
T Consensus 18 ev~tGEE~E~~l~~~raKL~~fd~~~~~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~-- 95 (150)
T 2crf_A 18 EVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDK-- 95 (150)
T ss_dssp TTSCCCCCCEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEECCTTCCEEC--
T ss_pred cccCCCcCeEEEEEEEeEEEEEcCCCCCcccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeeccCCceeec--
Confidence 68999999999999999999997 579999999999999987 3678999999999999999999999999986
Q ss_pred CCCcEEEEEeeecCcccccc---ccCC
Q psy15646 360 NTKQAYIWFAQDYADEVVSD---RFDS 383 (388)
Q Consensus 360 ~~~k~~~w~a~D~sdg~~~~---~f~~ 383 (388)
.++++|+|+++|++||.+.. ||+.
T Consensus 96 ~~~k~~~~~~~d~~d~~~~~~lirfk~ 122 (150)
T 2crf_A 96 ASEKSIHITAMDTEDQGVKVFLISASS 122 (150)
T ss_dssp CSSSEEEEEEEBSSSCCEEEEEEECCH
T ss_pred CCCCEEEEEeecCCCCceEEEEEEECC
Confidence 56899999999999987644 8873
No 18
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.95 E-value=3.8e-29 Score=216.38 Aligned_cols=98 Identities=23% Similarity=0.358 Sum_probs=81.7
Q ss_pred ccccccccceeeeeeeeeeeeccccceeecceeEEEEEcCCCCcEEEEEEeCCC-CcEEEceecCCCCeeeecCCCCcEE
Q psy15646 287 VTTGEENETVLFEQRAKLYRFVDKEWKERGVGQLKLLKNKDTGKVRLLMRRDIV-HKICANHFLHQDMELKPMSNTKQAY 365 (388)
Q Consensus 287 V~tGEEdEe~lf~~RaKL~r~d~~~WkERGvG~LkIl~~k~t~k~RllMR~d~v-~kV~LNh~I~~~m~~~~~~~~~k~~ 365 (388)
..||||||++||++|||||++++++|||||+|+|||++|+ ++++|||||+|++ +||||||+|+++|+++++ ..++.|
T Consensus 5 ~~tgEE~E~~lf~~raKLf~~~~~~WkERGvG~lki~~~k-~~k~RllmR~d~~~~kv~lN~~i~~~m~~~~~-g~~~~~ 82 (125)
T 2ec1_A 5 SSGEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTA-NQKTQLLVRADTNLGNILLNVLIPPNMPCTRT-GKNNVL 82 (125)
T ss_dssp ---CCCCCSCSEEEEEEEEEECSSSEEEEEEEEEEEEECS-SSSEEEEEEESSSSCCBSCCEECCSSCCEECC-TTTEEE
T ss_pred CcCCccCceeEEEEeeEEEEecCCCcccccEEEEEeeecC-CCcEEEEEEecCCCCEEEEeeEEcCCCeEEec-CCCcEE
Confidence 4689999999999999999999999999999999999887 7899999999985 899999999999999998 446788
Q ss_pred EEE-eeecCccc----ccc---ccCC-CCC
Q psy15646 366 IWF-AQDYADEV----VSD---RFDS-GNC 386 (388)
Q Consensus 366 ~w~-a~D~sdg~----~~~---~f~~-~~~ 386 (388)
+|+ ..|++||+ +.. ||+. +++
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~~lrfk~~e~a 112 (125)
T 2ec1_A 83 IVCVPNPPIDEKNATMPVTMLIRVKTSEDA 112 (125)
T ss_dssp EEECCSSCSCSSSSSSCEEEEEECSSHHHH
T ss_pred EEEccCCcccCCCCCceEEEEEEECCHHHH
Confidence 885 33345876 323 9984 544
No 19
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=99.42 E-value=9.3e-13 Score=114.20 Aligned_cols=95 Identities=18% Similarity=0.311 Sum_probs=82.4
Q ss_pred ccEEEEEEeeeEEeecc--cccceeeeE-----EEEEEEeCCCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEE
Q psy15646 182 NETVLFEQRAKLYRFVD--KEWKERGVG-----QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 254 (388)
Q Consensus 182 dEe~lF~~RaKLyrf~~--k~WKERGvG-----~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~ 254 (388)
.|++||..||+||.+++ ++|+.+|.| .++|+++..+..+|||+|+.+..+||+|+.|.++|.+... .++.+
T Consensus 2 ~E~~i~~~~A~V~~~d~~~~~W~~~g~G~~~l~~V~i~~~~~~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~~--~~~Fh 79 (130)
T 1qc6_A 2 SEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASSTFRVVGVKLQDQQVVINYSIVKGLKYNQA--TPTFH 79 (130)
T ss_dssp CCEEEEEEEEEEEEEETTTTEEEECC-----CEEEEEEEETTTTEEEEEEECTTTCCEEEEEECCTTCEEEEE--ETTEE
T ss_pred CceeEEEEEEEEEEECCCCCceeECCCCceeeeEEEEEecCCCcEEEEEEEeCCCCeEEEeeEEeCCcEEecc--CCeeE
Confidence 38899999999999986 789999998 8899999888899999999888999999999999999873 56788
Q ss_pred EEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 255 ~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
.|- ++ ...|.+.|.++++|++|+.
T Consensus 80 ~w~-----~~---~~~~GL~F~se~eA~~F~~ 103 (130)
T 1qc6_A 80 QWR-----DA---RQVYGLNFASKEEATTFSN 103 (130)
T ss_dssp EEE-----CS---SCEEEEEESCHHHHHHHHH
T ss_pred EEE-----cC---CEEEEEecCCHHHHHHHHH
Confidence 884 22 3789999999999999975
No 20
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=99.16 E-value=6.5e-11 Score=102.58 Aligned_cols=87 Identities=15% Similarity=0.295 Sum_probs=72.6
Q ss_pred ccceeeeeeeeeeeec--cccceeecce-----eEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEE
Q psy15646 293 NETVLFEQRAKLYRFV--DKEWKERGVG-----QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAY 365 (388)
Q Consensus 293 dEe~lf~~RaKL~r~d--~~~WkERGvG-----~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~ 365 (388)
.|++|+..||+||.+| .+.|..+|.| .++|++|..+..+|||+|+++..+||+|+.|+++|.|.. ....++
T Consensus 2 ~E~~i~~~~A~V~~~d~~~~~W~~~g~G~~~l~~V~i~~~~~~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~--~~~~Fh 79 (130)
T 1qc6_A 2 SEQSICQARASVMVYDDTSKKWVPIKPGQQGFSRINIYHNTASSTFRVVGVKLQDQQVVINYSIVKGLKYNQ--ATPTFH 79 (130)
T ss_dssp CCEEEEEEEEEEEEEETTTTEEEECC-----CEEEEEEEETTTTEEEEEEECTTTCCEEEEEECCTTCEEEE--EETTEE
T ss_pred CceeEEEEEEEEEEECCCCCceeECCCCceeeeEEEEEecCCCcEEEEEEEeCCCCeEEEeeEEeCCcEEec--cCCeeE
Confidence 3789999999999997 5689999998 889999998889999999988899999999999999987 677899
Q ss_pred EEE------eeecCcccccccc
Q psy15646 366 IWF------AQDYADEVVSDRF 381 (388)
Q Consensus 366 ~w~------a~D~sdg~~~~~f 381 (388)
.|- ++.|++.+-...|
T Consensus 80 ~w~~~~~~~GL~F~se~eA~~F 101 (130)
T 1qc6_A 80 QWRDARQVYGLNFASKEEATTF 101 (130)
T ss_dssp EEECSSCEEEEEESCHHHHHHH
T ss_pred EEEcCCEEEEEecCCHHHHHHH
Confidence 994 5566665544444
No 21
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=99.00 E-value=3.4e-09 Score=91.00 Aligned_cols=95 Identities=14% Similarity=0.255 Sum_probs=79.2
Q ss_pred ccEEEEEEeeeEEeecc---cccceeee--EEEEEEEeCCCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEEEE
Q psy15646 182 NETVLFEQRAKLYRFVD---KEWKERGV--GQLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW 256 (388)
Q Consensus 182 dEe~lF~~RaKLyrf~~---k~WKERGv--G~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w 256 (388)
.|..||..||.||.+|+ +.|..+|. |.+.|.++...+.|||+.|++ ++|++|+.|.++|++.+. ++....|
T Consensus 2 ~E~~i~~~rA~V~~~D~~tk~~W~p~g~~~~~V~~~~d~~~~~yRIv~~~~--~~vv~n~~i~~~l~y~~a--~p~FhqW 77 (120)
T 1ddw_A 2 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTKT--SQKFGQW 77 (120)
T ss_dssp CEEEEEEEEEEEEEECTTTSCSEEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCCEEC--SSSEEEE
T ss_pred CceEEEEEEEEEEEEcCCCCCceEeCCCCceEEEEEEcCCCCEEEEEEccC--CEEEEeCEecCCcEEeeC--CccccEE
Confidence 48899999999999987 49999554 445578887777899999985 699999999999999874 5778999
Q ss_pred EeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 257 FAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 257 ~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
-. +.....|-+.|.++++|++|..
T Consensus 78 ~d------~~~~~~~GLnF~s~~eA~~F~~ 101 (120)
T 1ddw_A 78 AD------SRANTVYGLGFSSEHHLSKFAE 101 (120)
T ss_dssp EE------TTTTEEEEEECSSHHHHHHHHH
T ss_pred Ec------CCCcEEEEeccCCHHHHHHHHH
Confidence 63 2235889999999999999974
No 22
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=98.85 E-value=1e-08 Score=92.69 Aligned_cols=95 Identities=14% Similarity=0.261 Sum_probs=79.0
Q ss_pred ccEEEEEEeeeEEeecc---cccceeeeEEEE--EEEeCCCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEEEE
Q psy15646 182 NETVLFEQRAKLYRFVD---KEWKERGVGQLK--LLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIW 256 (388)
Q Consensus 182 dEe~lF~~RaKLyrf~~---k~WKERGvG~LK--Ilk~k~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w 256 (388)
.|..||..||.||.+|+ +.|...|.|.++ |.++...+.|||+.|++ ++|++|+.|.++|++.+. ..+...|
T Consensus 7 ~E~~I~s~rA~Vm~~D~~tk~~WvP~g~~~~~V~i~~d~~rnsyRIvg~~d--~kvvinc~I~~~l~Y~ka--sp~FHqW 82 (168)
T 1i2h_A 7 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTKT--SQKFGQW 82 (168)
T ss_dssp SSCCSEEEEEEEEEECTTSSCCSEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCEEEE--ETTEEEE
T ss_pred cceeEEEEEEEEEEECCCCCCceeecCCCCeEEEEEEcCCCCEEEEEEccC--CEEEEecEecCCcEEeeC--Cccccee
Confidence 58899999999999987 489995555554 77887777899999985 699999999999999874 5778999
Q ss_pred EeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 257 FAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 257 ~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
-. +.....|-+.|.++++|++|..
T Consensus 83 ~d------~~~~~v~GLnF~Se~eA~~F~~ 106 (168)
T 1i2h_A 83 AD------SRANTVYGLGFSSEHHLSKFAE 106 (168)
T ss_dssp EE------TTTTEEEEEEESSHHHHHHHHH
T ss_pred ec------CCCcEEEEeccCCHHHHHHHHH
Confidence 63 2235889999999999999964
No 23
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=98.44 E-value=8.2e-07 Score=75.50 Aligned_cols=94 Identities=21% Similarity=0.359 Sum_probs=79.7
Q ss_pred cEEEEEEeeeEEeecc--cccceeee---E--EEEEEEeCCCCcEEEEEEeCC-eeeeEeccccCcCceEeecCCCCcEE
Q psy15646 183 ETVLFEQRAKLYRFVD--KEWKERGV---G--QLKLLKNKDTGKVRLLMRRDI-VHKICANHFLHQDMELKPMPNTKQAY 254 (388)
Q Consensus 183 Ee~lF~~RaKLyrf~~--k~WKERGv---G--~LKIlk~k~tgk~RLLMRrdq-v~KV~lN~~I~~~M~~~~~~~s~ks~ 254 (388)
|..|+..||.+|.+++ +.|.-.|. | .+.|.++...+.|||+.|+-+ -.++++|+.|.++|++... .+..-
T Consensus 3 e~~i~~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~~--~p~FH 80 (115)
T 1egx_A 3 ETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQA--TPNFH 80 (115)
T ss_dssp SCEEEEEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCCS--STTEE
T ss_pred ceeEEEEEEEEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEec--Cccce
Confidence 7899999999999976 66999886 4 599999877778999999977 7899999999999999764 45677
Q ss_pred EEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 255 ~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
.|-. + ...|-+.|.++++|.+|..
T Consensus 81 ~w~~-----~---~~~~GLnF~se~eA~~F~~ 104 (115)
T 1egx_A 81 QWRD-----A---RQVWGLNFGSKEDAAQFAA 104 (115)
T ss_dssp EEES-----S---SCEEEEEESSHHHHHHHHH
T ss_pred EEec-----C---CEEEEEecCCHHHHHHHHH
Confidence 7752 2 2689999999999999964
No 24
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=98.44 E-value=1.1e-06 Score=74.40 Aligned_cols=95 Identities=21% Similarity=0.362 Sum_probs=79.0
Q ss_pred ccEEEEEEeeeEEeecc--cccceee--eEE--EEEEEeCCCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEEE
Q psy15646 182 NETVLFEQRAKLYRFVD--KEWKERG--VGQ--LKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYI 255 (388)
Q Consensus 182 dEe~lF~~RaKLyrf~~--k~WKERG--vG~--LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~ 255 (388)
.|..|+..||.+|.+++ +.|.-.| .|- +.|.++...+.|||+.|+-+-.++++|+.|.++|++... .+..-.
T Consensus 2 ~e~~i~~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~--~p~Fh~ 79 (112)
T 1evh_A 2 SEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQA--TQTFHQ 79 (112)
T ss_dssp CEEEEEEEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCC--SSSEEE
T ss_pred CceeEEEEEEEEEEEcCCCCceEECCCCCCceEEEEEEECCCCEEEEEEEECCCCcEEEeeEecCCceEEec--Ccccee
Confidence 38899999999999986 7899887 344 888888766789999999777899999999999999864 456677
Q ss_pred EEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 256 WFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 256 w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
|-. + ...|-+-|.++++|+.|..
T Consensus 80 w~~-----~---~~~~GLnF~se~eA~~F~~ 102 (112)
T 1evh_A 80 WRD-----A---RQVYGLNFGSKEDANVFAS 102 (112)
T ss_dssp EEC-----S---SCEEEEEESSHHHHHHHHH
T ss_pred Eec-----C---CEEEEEecCCHHHHHHHHH
Confidence 752 2 2689999999999999964
No 25
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=98.44 E-value=8.4e-07 Score=76.07 Aligned_cols=72 Identities=15% Similarity=0.317 Sum_probs=61.6
Q ss_pred ccceeeeeeeeeeeec--c-ccceeecce--eEEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEEEE
Q psy15646 293 NETVLFEQRAKLYRFV--D-KEWKERGVG--QLKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIW 367 (388)
Q Consensus 293 dEe~lf~~RaKL~r~d--~-~~WkERGvG--~LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w 367 (388)
.|..|+..||.||.+| . +.|..+|.| .+.|++|...+.+||+.++| .++++|..|+++|.|.. ...++..|
T Consensus 2 ~E~~i~~~rA~V~~~D~~tk~~W~p~g~~~~~V~~~~d~~~~~yRIv~~~~--~~vv~n~~i~~~l~y~~--a~p~FhqW 77 (120)
T 1ddw_A 2 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTK--TSQKFGQW 77 (120)
T ss_dssp CEEEEEEEEEEEEEECTTTSCSEEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCCEE--CSSSEEEE
T ss_pred CceEEEEEEEEEEEEcCCCCCceEeCCCCceEEEEEEcCCCCEEEEEEccC--CEEEEeCEecCCcEEee--CCccccEE
Confidence 4789999999999998 3 499995544 45588888888899999985 59999999999999988 78899999
Q ss_pred E
Q psy15646 368 F 368 (388)
Q Consensus 368 ~ 368 (388)
-
T Consensus 78 ~ 78 (120)
T 1ddw_A 78 A 78 (120)
T ss_dssp E
T ss_pred E
Confidence 6
No 26
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=98.39 E-value=6.8e-07 Score=80.79 Aligned_cols=73 Identities=15% Similarity=0.307 Sum_probs=61.9
Q ss_pred ccceeeeeeeeeeeecc---ccceeecceeEE--EEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEEEE
Q psy15646 293 NETVLFEQRAKLYRFVD---KEWKERGVGQLK--LLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIW 367 (388)
Q Consensus 293 dEe~lf~~RaKL~r~d~---~~WkERGvG~Lk--Il~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w 367 (388)
.|..||..||.||.+|+ +.|...|.|.++ |++|...+.+||+.|+| .+|++|..|+++|+|.. ...+++.|
T Consensus 7 ~E~~I~s~rA~Vm~~D~~tk~~WvP~g~~~~~V~i~~d~~rnsyRIvg~~d--~kvvinc~I~~~l~Y~k--asp~FHqW 82 (168)
T 1i2h_A 7 GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDG--SKAIINSTITPNMTFTK--TSQKFGQW 82 (168)
T ss_dssp SSCCSEEEEEEEEEECTTSSCCSEESCSSCEEEEEEEETTTTEEEEEEEET--TEEEEEEECCTTCCEEE--EETTEEEE
T ss_pred cceeEEEEEEEEEEECCCCCCceeecCCCCeEEEEEEcCCCCEEEEEEccC--CEEEEecEecCCcEEee--CCccccee
Confidence 57899999999999983 389995555555 78888778899999985 59999999999999988 67889999
Q ss_pred Ee
Q psy15646 368 FA 369 (388)
Q Consensus 368 ~a 369 (388)
-.
T Consensus 83 ~d 84 (168)
T 1i2h_A 83 AD 84 (168)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 27
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.06 E-value=2e-05 Score=68.00 Aligned_cols=96 Identities=14% Similarity=0.250 Sum_probs=77.2
Q ss_pred cccEEEEEEeeeEEeecc--cccceeeeEE---EEEEEeC---C--CCcEEEEEEeCCeeeeEeccccCcCceEeecCCC
Q psy15646 181 ENETVLFEQRAKLYRFVD--KEWKERGVGQ---LKLLKNK---D--TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNT 250 (388)
Q Consensus 181 EdEe~lF~~RaKLyrf~~--k~WKERGvG~---LKIlk~k---~--tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s 250 (388)
+.|..|+..||-+|.+|+ +.|.-.|.|- +.|.+.+ + .+.|||+.|+-+-.++++|+.|.++|++... .
T Consensus 10 ~~~~~i~~~~A~Vm~~D~~~~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~--~ 87 (126)
T 2jp2_A 10 DDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKA--N 87 (126)
T ss_dssp SCCSEEEEEEEEEEEECTTSSSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEE--E
T ss_pred CCcceEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEec--C
Confidence 468999999999999986 7899988776 4555554 3 3469999999777899999999999999874 3
Q ss_pred CcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 251 KQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 251 ~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
...-.|-. + -..|-+.|.++++|.+|..
T Consensus 88 p~FH~w~~-----~---~~~~GLnF~se~eA~~F~~ 115 (126)
T 2jp2_A 88 PTFHHWKV-----D---NRKFGLTFQSPADARAFDR 115 (126)
T ss_dssp TTEEEEEC-----S---SSEEEEEESSHHHHHHHHH
T ss_pred CcceEEEc-----C---CEEEEEecCCHHHHHHHHH
Confidence 55677753 2 2459999999999999964
No 28
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=98.06 E-value=1.1e-05 Score=68.79 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=72.4
Q ss_pred ccEEEEEEeeeEEeecc--cccceeeeEE---EEEEEeC-----CCCcEEEEEEeCCeeeeEeccccCcCceEeecCCCC
Q psy15646 182 NETVLFEQRAKLYRFVD--KEWKERGVGQ---LKLLKNK-----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTK 251 (388)
Q Consensus 182 dEe~lF~~RaKLyrf~~--k~WKERGvG~---LKIlk~k-----~tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ 251 (388)
.|..|+..||.+|.+|+ +.|.-.|.|- +.|.+++ ..+.|||+.|+-+-.+|++|+.|.++|++... ..
T Consensus 2 ~~~~i~~~~A~V~~~d~~~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~--~p 79 (118)
T 1xod_A 2 SDDSYARVRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKV--TP 79 (118)
T ss_dssp ---CCEEEEEEEEEECSSSSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEE--ET
T ss_pred CCccEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEec--CC
Confidence 47789999999999986 8899887665 4566553 23469999999777899999999999999874 35
Q ss_pred cEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 252 QAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 252 ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
..-.|-. + -..|-+.|.++++|.+|..
T Consensus 80 ~Fh~w~~-----~---~~~~GL~F~se~eA~~F~~ 106 (118)
T 1xod_A 80 TFHHWRI-----G---DKKFGLTFQSPADARAFDR 106 (118)
T ss_dssp TEEEEEE-----T---TEEEEEEESSHHHHHHHHH
T ss_pred cceEEEe-----C---CEEEEEecCCHHHHHHHHH
Confidence 5667753 2 3559999999999999964
No 29
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=98.05 E-value=1.5e-05 Score=67.37 Aligned_cols=87 Identities=16% Similarity=0.362 Sum_probs=70.6
Q ss_pred ccceeeeeeeeeeeec--cccceeec--cee--EEEEEcCCCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEEE
Q psy15646 293 NETVLFEQRAKLYRFV--DKEWKERG--VGQ--LKLLKNKDTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYI 366 (388)
Q Consensus 293 dEe~lf~~RaKL~r~d--~~~WkERG--vG~--LkIl~~k~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~ 366 (388)
.|..|+..||.+|.+| .+.|...| -|. +.|.++...+.+||+.|+-+-.++++|+-|+++|.|.. ...+.-.
T Consensus 2 ~e~~i~~~~A~V~~~d~~~~~W~p~~~~~g~s~V~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~--~~p~Fh~ 79 (112)
T 1evh_A 2 SEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQ--ATQTFHQ 79 (112)
T ss_dssp CEEEEEEEEEEEEEEETTTTEEEEGGGCCSCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBC--CSSSEEE
T ss_pred CceeEEEEEEEEEEEcCCCCceEECCCCCCceEEEEEEECCCCEEEEEEEECCCCcEEEeeEecCCceEEe--cCcccee
Confidence 3778999999999997 45899988 344 88888877778999999877889999999999999877 6778999
Q ss_pred EE------eeecCcccccccc
Q psy15646 367 WF------AQDYADEVVSDRF 381 (388)
Q Consensus 367 w~------a~D~sdg~~~~~f 381 (388)
|- +..|++++-...|
T Consensus 80 w~~~~~~~GLnF~se~eA~~F 100 (112)
T 1evh_A 80 WRDARQVYGLNFGSKEDANVF 100 (112)
T ss_dssp EECSSCEEEEEESSHHHHHHH
T ss_pred EecCCEEEEEecCCHHHHHHH
Confidence 85 5566665544444
No 30
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=98.03 E-value=1.4e-05 Score=67.86 Aligned_cols=86 Identities=17% Similarity=0.359 Sum_probs=70.6
Q ss_pred cceeeeeeeeeeeec--cccceeecc---e--eEEEEEcCCCCcEEEEEEeCC-CCcEEEceecCCCCeeeecCCCCcEE
Q psy15646 294 ETVLFEQRAKLYRFV--DKEWKERGV---G--QLKLLKNKDTGKVRLLMRRDI-VHKICANHFLHQDMELKPMSNTKQAY 365 (388)
Q Consensus 294 Ee~lf~~RaKL~r~d--~~~WkERGv---G--~LkIl~~k~t~k~RllMR~d~-v~kV~LNh~I~~~m~~~~~~~~~k~~ 365 (388)
|..|+..||.+|.+| .+.|...|. | .+.|.++...+.+||++|+-+ -.++++|+.|+++|.|.. .....-
T Consensus 3 e~~i~~~~A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~--~~p~FH 80 (115)
T 1egx_A 3 ETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQ--ATPNFH 80 (115)
T ss_dssp SCEEEEEEEECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCC--SSTTEE
T ss_pred ceeEEEEEEEEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEe--cCccce
Confidence 678999999999997 456999887 5 499999988888999999977 789999999999999877 677899
Q ss_pred EEE------eeecCcccccccc
Q psy15646 366 IWF------AQDYADEVVSDRF 381 (388)
Q Consensus 366 ~w~------a~D~sdg~~~~~f 381 (388)
.|- +..|++.+-...|
T Consensus 81 ~w~~~~~~~GLnF~se~eA~~F 102 (115)
T 1egx_A 81 QWRDARQVWGLNFGSKEDAAQF 102 (115)
T ss_dssp EEESSSCEEEEEESSHHHHHHH
T ss_pred EEecCCEEEEEecCCHHHHHHH
Confidence 985 5566555444444
No 31
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.61 E-value=0.00022 Score=61.46 Aligned_cols=90 Identities=9% Similarity=0.153 Sum_probs=69.9
Q ss_pred cccccceeeeeeeeeeeec--cccceeeccee---EEEEEcC-----CCCcEEEEEEeCCCCcEEEceecCCCCeeeecC
Q psy15646 290 GEENETVLFEQRAKLYRFV--DKEWKERGVGQ---LKLLKNK-----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMS 359 (388)
Q Consensus 290 GEEdEe~lf~~RaKL~r~d--~~~WkERGvG~---LkIl~~k-----~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~ 359 (388)
.-+.|..|+..||-+|.+| .+.|...|.|- +.|.+++ ....+||+.++-+-.++++|..|+++|+|..
T Consensus 8 ~~~~~~~i~~~~A~Vm~~D~~~~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~-- 85 (126)
T 2jp2_A 8 HPDDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTK-- 85 (126)
T ss_dssp SSSCCSEEEEEEEEEEEECTTSSSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEE--
T ss_pred CCCCcceEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEe--
Confidence 3457889999999999997 56899988776 4455544 3457799999977789999999999999987
Q ss_pred CCCcEEEEE------eeecCcccccccc
Q psy15646 360 NTKQAYIWF------AQDYADEVVSDRF 381 (388)
Q Consensus 360 ~~~k~~~w~------a~D~sdg~~~~~f 381 (388)
...+.-.|- +..|++.+-...|
T Consensus 86 ~~p~FH~w~~~~~~~GLnF~se~eA~~F 113 (126)
T 2jp2_A 86 ANPTFHHWKVDNRKFGLTFQSPADARAF 113 (126)
T ss_dssp EETTEEEEECSSSEEEEEESSHHHHHHH
T ss_pred cCCcceEEEcCCEEEEEecCCHHHHHHH
Confidence 567788885 5666665544444
No 32
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=97.61 E-value=0.00014 Score=61.94 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=63.4
Q ss_pred ccceeeeeeeeeeeec--cccceeecceeE---EEEEcC-----CCCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCC
Q psy15646 293 NETVLFEQRAKLYRFV--DKEWKERGVGQL---KLLKNK-----DTGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTK 362 (388)
Q Consensus 293 dEe~lf~~RaKL~r~d--~~~WkERGvG~L---kIl~~k-----~t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~ 362 (388)
.|..|+..||.+|.+| .+.|...|.|-| .|.+++ ..+.+||+.|+-+..++++|+.|+++|.|.. ...
T Consensus 2 ~~~~i~~~~A~V~~~d~~~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~--~~p 79 (118)
T 1xod_A 2 SDDSYARVRAVVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNK--VTP 79 (118)
T ss_dssp ---CCEEEEEEEEEECSSSSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEE--EET
T ss_pred CCccEEEEEEEEeeEcCCCCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEe--cCC
Confidence 4678999999999997 568999887764 556553 3456799999977789999999999999877 567
Q ss_pred cEEEEE------eeecCcccccccc
Q psy15646 363 QAYIWF------AQDYADEVVSDRF 381 (388)
Q Consensus 363 k~~~w~------a~D~sdg~~~~~f 381 (388)
+.-.|- +..|++.+-...|
T Consensus 80 ~Fh~w~~~~~~~GL~F~se~eA~~F 104 (118)
T 1xod_A 80 TFHHWRIGDKKFGLTFQSPADARAF 104 (118)
T ss_dssp TEEEEEETTEEEEEEESSHHHHHHH
T ss_pred cceEEEeCCEEEEEecCCHHHHHHH
Confidence 788884 5566554444433
No 33
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=97.11 E-value=0.0031 Score=54.78 Aligned_cols=92 Identities=16% Similarity=0.223 Sum_probs=71.1
Q ss_pred EEEEEeeeEEeecc--cccceee---eEEEEEEEeCC-----CCcEEEEEEeCCeeeeEeccccCcCceEeecCCCCcEE
Q psy15646 185 VLFEQRAKLYRFVD--KEWKERG---VGQLKLLKNKD-----TGKVRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAY 254 (388)
Q Consensus 185 ~lF~~RaKLyrf~~--k~WKERG---vG~LKIlk~k~-----tgk~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~ 254 (388)
..|..||-.|.+|+ +.|.--| +-.+-|.++.. .+.|||+=||-+-.+|+||..|.++|++.+.. +..=
T Consensus 12 ~~~~~rA~Vm~~Dd~tk~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkat--p~FH 89 (130)
T 3syx_A 12 SYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVT--PTFH 89 (130)
T ss_dssp EEEEEEEEEEEECSSSSCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEEE--TTEE
T ss_pred eeeEEEEEeeeEcCCCCceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEecc--cccc
Confidence 57899999999987 7899764 33556666422 13699999976667899999999999998753 4566
Q ss_pred EEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 255 IWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 255 ~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
.|-- +. ..|=+.|.++++|.+|.+
T Consensus 90 qWrd-----~~---~~yGL~F~S~~dA~~F~~ 113 (130)
T 3syx_A 90 HWKI-----DD---KKFGLTFQSPADARAFDR 113 (130)
T ss_dssp EEEE-----TT---EEEEEEESSHHHHHHHHH
T ss_pred cccc-----cC---eEeecccCCHHHHHHHHH
Confidence 7852 22 559999999999999963
No 34
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=94.59 E-value=0.11 Score=45.12 Aligned_cols=71 Identities=14% Similarity=0.107 Sum_probs=53.5
Q ss_pred eeeeeeeeeeeec--cccceeecce---eEEEEEcCC-----CCcEEEEEEeCCCCcEEEceecCCCCeeeecCCCCcEE
Q psy15646 296 VLFEQRAKLYRFV--DKEWKERGVG---QLKLLKNKD-----TGKVRLLMRRDIVHKICANHFLHQDMELKPMSNTKQAY 365 (388)
Q Consensus 296 ~lf~~RaKL~r~d--~~~WkERGvG---~LkIl~~k~-----t~k~RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~ 365 (388)
..|.+||-+|.+| .+.|---|-| .+-|.++.. .+.+||+=|+-+-.+|+||..|.++|+|.. ...++=
T Consensus 12 ~~~~~rA~Vm~~Dd~tk~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynk--atp~FH 89 (130)
T 3syx_A 12 SYARVRAVVMTRDDSSGGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNK--VTPTFH 89 (130)
T ss_dssp EEEEEEEEEEEECSSSSCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEE--EETTEE
T ss_pred eeeEEEEEeeeEcCCCCceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEe--cccccc
Confidence 4578999999998 5689987544 455555421 236799988666678999999999999977 566677
Q ss_pred EEE
Q psy15646 366 IWF 368 (388)
Q Consensus 366 ~w~ 368 (388)
-|-
T Consensus 90 qWr 92 (130)
T 3syx_A 90 HWK 92 (130)
T ss_dssp EEE
T ss_pred ccc
Confidence 774
No 35
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=94.13 E-value=0.94 Score=40.07 Aligned_cols=91 Identities=16% Similarity=0.208 Sum_probs=69.5
Q ss_pred EEEEEEeeeEEeecc-cccceeeeEEEEEEEeCCCCc--EEEEEEeCCeeeeEeccccCcCceEeecCCCCcEEEEEeec
Q psy15646 184 TVLFEQRAKLYRFVD-KEWKERGVGQLKLLKNKDTGK--VRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQD 260 (388)
Q Consensus 184 e~lF~~RaKLyrf~~-k~WKERGvG~LKIlk~k~tgk--~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w~a~D 260 (388)
.+|-..=|.||..+. +.|.-++.|.|-+.++..... .||+-+. .++++.++-|+.+|.+.... .....|-.
T Consensus 41 ~~lataVaqLy~a~~~~~W~~~~~Gal~~VkD~~~rsyf~RlvDl~--~~~viweqELY~~f~Y~~~r--~~FHtFe~-- 114 (152)
T 1mke_A 41 VTMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIK--DGKLLWEQELYNNFVYNSPR--GYFHTFAG-- 114 (152)
T ss_dssp EEEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEECSS--SCSEEEEEECCSSCCCBCSS--SSEEEEEC--
T ss_pred cEEEEeeEEEEEECCCCceEecCceEEEEEEECCCCeEEEEEEEcc--CCeEEEEeecccceeeccCC--CeEEEEec--
Confidence 577778889999975 699999999999988764443 3888776 46899999999999986532 22333321
Q ss_pred CCccccccceeeeecCChhhHHhhcc
Q psy15646 261 YADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 261 ~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
.-..+-+.|-+.++|.+|..
T Consensus 115 ------d~c~~GLnFade~EA~~F~~ 134 (152)
T 1mke_A 115 ------DTCQVALNFANEEEAKKFRK 134 (152)
T ss_dssp ------SSSEEEEEESSHHHHHHHHH
T ss_pred ------CCcEEEEeeCCHHHHHHHHH
Confidence 14568999999999999964
No 36
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=93.36 E-value=0.47 Score=42.69 Aligned_cols=91 Identities=18% Similarity=0.236 Sum_probs=69.8
Q ss_pred EEEEEEeeeEEeecc-cccceeeeEEEEEEEeCCCCc--EEEEEEeCCeeeeEeccccCcCceEeecCCCCcEEEEEeec
Q psy15646 184 TVLFEQRAKLYRFVD-KEWKERGVGQLKLLKNKDTGK--VRLLMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFAQD 260 (388)
Q Consensus 184 e~lF~~RaKLyrf~~-k~WKERGvG~LKIlk~k~tgk--~RLLMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w~a~D 260 (388)
.+|-..=|.||..+. +.|.-++.|.|-+.++..... .||+-+.+ ++|+.++-|+.+|++.... .....|-.
T Consensus 58 ~~lataVaqLy~a~~~~~W~~~~~Gal~~vkD~~~rsyf~RlvDl~~--~~vvweqELY~~f~Y~~~r--~~FHtFe~-- 131 (169)
T 2ifs_A 58 VTMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKD--GKLLWEQELYNNFVYNSPR--GYFHTFAG-- 131 (169)
T ss_dssp EEEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEEETTT--CCCCEEEECCSSCCCBCCC--SSEEEEEC--
T ss_pred eEEEEEEEEEEEECCCCeeEecCceEEEEEEECCCCeEEEEEEEccC--CeEEEEeecccceeeccCC--CeEEEeec--
Confidence 367778899999976 699999999999988764443 38888864 5899999999999996532 22333421
Q ss_pred CCccccccceeeeecCChhhHHhhcc
Q psy15646 261 YADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 261 ~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
.-..+-+.|.+.++|.+|..
T Consensus 132 ------d~c~~GLnFade~EA~~F~~ 151 (169)
T 2ifs_A 132 ------DTCQVALNFANEEEAKKFRK 151 (169)
T ss_dssp ------SSSEEEEECSCHHHHHHHHH
T ss_pred ------CCcEEEEeeCCHHHHHHHHH
Confidence 14568999999999999964
No 37
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=89.61 E-value=0.9 Score=40.18 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=62.1
Q ss_pred ceeeeeeeeeeeec-cccceeecceeEEEEEcCCCCcE--EEEEEeCCCCcEEEceecCCCCeeeecCCCCcEEEEE---
Q psy15646 295 TVLFEQRAKLYRFV-DKEWKERGVGQLKLLKNKDTGKV--RLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWF--- 368 (388)
Q Consensus 295 e~lf~~RaKL~r~d-~~~WkERGvG~LkIl~~k~t~k~--RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w~--- 368 (388)
.+|...-|.||..+ .+.|.-++.|.|-+.++.....+ ||+=..+ ++++.++-|+.+|.|.. .-.....|-
T Consensus 41 ~~lataVaqLy~a~~~~~W~~~~~Gal~~VkD~~~rsyf~RlvDl~~--~~viweqELY~~f~Y~~--~r~~FHtFe~d~ 116 (152)
T 1mke_A 41 VTMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKD--GKLLWEQELYNNFVYNS--PRGYFHTFAGDT 116 (152)
T ss_dssp EEEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEECSSS--CSEEEEEECCSSCCCBC--SSSSEEEEECSS
T ss_pred cEEEEeeEEEEEECCCCceEecCceEEEEEEECCCCeEEEEEEEccC--CeEEEEeecccceeecc--CCCeEEEEecCC
Confidence 45667778889887 56899999999999988654444 8887764 58999999999999866 334677773
Q ss_pred ---eeecCcccccccc
Q psy15646 369 ---AQDYADEVVSDRF 381 (388)
Q Consensus 369 ---a~D~sdg~~~~~f 381 (388)
+..|++.+-...|
T Consensus 117 c~~GLnFade~EA~~F 132 (152)
T 1mke_A 117 CQVALNFANEEEAKKF 132 (152)
T ss_dssp SEEEEEESSHHHHHHH
T ss_pred cEEEEeeCCHHHHHHH
Confidence 6667765554444
No 38
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=88.87 E-value=0.87 Score=40.92 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=60.3
Q ss_pred eeeeeeeeeeeec-cccceeecceeEEEEEcCCCCcE--EEEEEeCCCCcEEEceecCCCCeeeecCCCCcEEEEE----
Q psy15646 296 VLFEQRAKLYRFV-DKEWKERGVGQLKLLKNKDTGKV--RLLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIWF---- 368 (388)
Q Consensus 296 ~lf~~RaKL~r~d-~~~WkERGvG~LkIl~~k~t~k~--RllMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w~---- 368 (388)
+|...-|.||..+ .+.|.-++.|.|-+.++.....+ ||+=..+ ++++.++-|+.+|.|.. .-.....|-
T Consensus 59 ~lataVaqLy~a~~~~~W~~~~~Gal~~vkD~~~rsyf~RlvDl~~--~~vvweqELY~~f~Y~~--~r~~FHtFe~d~c 134 (169)
T 2ifs_A 59 TMSSAVVQLYAADRNCMWSKKCSGVACLVKDNPQRSYFLRIFDIKD--GKLLWEQELYNNFVYNS--PRGYFHTFAGDTC 134 (169)
T ss_dssp EEEEEEEEEEEEETTTEEEEEEEEEEEEEEETTTTEEEEEEEETTT--CCCCEEEECCSSCCCBC--CCSSEEEEECSSS
T ss_pred EEEEEEEEEEEECCCCeeEecCceEEEEEEECCCCeEEEEEEEccC--CeEEEEeecccceeecc--CCCeEEEeecCCc
Confidence 4445667788876 56899999999999888654443 8887764 58999999999999966 334677773
Q ss_pred --eeecCcccccccc
Q psy15646 369 --AQDYADEVVSDRF 381 (388)
Q Consensus 369 --a~D~sdg~~~~~f 381 (388)
+..|++.+-...|
T Consensus 135 ~~GLnFade~EA~~F 149 (169)
T 2ifs_A 135 QVALNFANEEEAKKF 149 (169)
T ss_dssp EEEEECSCHHHHHHH
T ss_pred EEEEeeCCHHHHHHH
Confidence 6667765544443
No 39
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=54.78 E-value=42 Score=28.67 Aligned_cols=63 Identities=14% Similarity=0.310 Sum_probs=43.6
Q ss_pred eeeeeeeec--cccceeecc-eeEEEEEcCCCCcEEE-EEEeCCCCcEEEceecCCCCeeeecCCCCcEEEE
Q psy15646 300 QRAKLYRFV--DKEWKERGV-GQLKLLKNKDTGKVRL-LMRRDIVHKICANHFLHQDMELKPMSNTKQAYIW 367 (388)
Q Consensus 300 ~RaKL~r~d--~~~WkERGv-G~LkIl~~k~t~k~Rl-lMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w 367 (388)
.-|.||.|+ .++|...|+ |.|-|.+-....+++| ||-|-+...++ ..|++++.++.. +..++|
T Consensus 36 ~~v~vY~f~~~~~~W~K~~iEG~LFv~~R~~~P~~~~ivLNR~~~~n~~--~~l~~~~~~e~~---~~~li~ 102 (134)
T 2lyd_A 36 SHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFV--EPITGSLELQSQ---PPFLLY 102 (134)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEEEEEEECSSSSSEEEEEEETTTTEEEE--EECCSSCEEEEE---TTEEEE
T ss_pred CeEEEEEecCCcCceeEcCCcceEEEEEccCCCceEEEEEcCCCCccee--EEcCCCcEEEee---CCEEEE
Confidence 458999997 468986665 8898887665667754 46666666665 357888888873 235555
No 40
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=52.60 E-value=1.1e+02 Score=26.08 Aligned_cols=89 Identities=15% Similarity=0.272 Sum_probs=56.4
Q ss_pred EEEEEE-eeeEEeecc--cccceeee-EEEEEEEeCCCCcEEE-EEEeCCeeeeEeccccCcCceEeecCCCCcEEEEEe
Q psy15646 184 TVLFEQ-RAKLYRFVD--KEWKERGV-GQLKLLKNKDTGKVRL-LMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA 258 (388)
Q Consensus 184 e~lF~~-RaKLyrf~~--k~WKERGv-G~LKIlk~k~tgk~RL-LMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w~a 258 (388)
++|+.. -|-||.|+. ++|...|+ |.|-|-+....-+++| ||-|-+...++ ..|.++|.++... .-+++-.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~LFv~~R~~~P~~~~ivLNR~~~~n~~--~~l~~~~~~e~~~---~~li~r~ 104 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGAFFIYHRNAEPFHSIFINNRLNTTSFV--EPITGSLELQSQP---PFLLYRN 104 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEECSSSSSEEEEEEETTTTEEEE--EECCSSCEEEEET---TEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcceEEEEEccCCCceEEEEEcCCCCccee--EEcCCCcEEEeeC---CEEEEEC
Confidence 455544 789999976 68987775 8888877655557764 44455555444 3577888888743 2344421
Q ss_pred ecCCccccccceeeeecCChhhHHhh
Q psy15646 259 QDYADEVVSDEQLCAKFKLPEDAERF 284 (388)
Q Consensus 259 ~D~aDee~k~et~~IRFKt~e~A~eF 284 (388)
+ .-+.|-|=|=+.+++++.
T Consensus 105 -~------~~~I~GiWf~~~~d~~~i 123 (134)
T 2lyd_A 105 -E------RSRIRGFWFYNSEECDRI 123 (134)
T ss_dssp -G------GGEEEEEEESSHHHHHHH
T ss_pred -C------CCcEEEEEecChHHHHHH
Confidence 1 124566777777776654
No 41
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=34.52 E-value=1.1e+02 Score=25.97 Aligned_cols=62 Identities=16% Similarity=0.470 Sum_probs=40.0
Q ss_pred eeeeeeeec--cccceeecc-eeEEEEEcCCCCcEE-EEEEeCCCCcEEEceecCCCCeeeecCCCCcEEEE
Q psy15646 300 QRAKLYRFV--DKEWKERGV-GQLKLLKNKDTGKVR-LLMRRDIVHKICANHFLHQDMELKPMSNTKQAYIW 367 (388)
Q Consensus 300 ~RaKL~r~d--~~~WkERGv-G~LkIl~~k~t~k~R-llMR~d~v~kV~LNh~I~~~m~~~~~~~~~k~~~w 367 (388)
.-|-||.|+ .++|...|+ |.|-|.+-. ..+++ +||-|-+...+. ..|++++.++.. +..+.+
T Consensus 31 ~~v~vY~f~~~~~~W~K~~iEGtLFv~~R~-~P~~~~iVlNR~~~~n~~--~~i~~~~~~e~~---~~~l~~ 96 (127)
T 2qkl_A 31 SHVAVYQFDVGSQKWLKTSIEGTFFLVKDQ-RARVGYVILNRNSPENLY--LFINHPSNVHLV---DRYLIH 96 (127)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEET-TCCEEEEEEESSSSCCEE--EEECSGGGEEEE---TTEEEE
T ss_pred CeEEEEEecCCCCceEEcCcEEEEEEEEcc-CCceEEEEEcCCCCcCee--EecCCCceEEEe---CCEEEE
Confidence 568899998 679998776 888887655 55664 456666666555 457788888873 235555
No 42
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=26.79 E-value=2.9e+02 Score=23.29 Aligned_cols=41 Identities=17% Similarity=0.249 Sum_probs=29.8
Q ss_pred cccCcCceEeecCCCCcEEEEEeecCCccccccceeeeecCChhhHHhhcc
Q psy15646 236 HFLHQDMELKPMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFRS 286 (388)
Q Consensus 236 ~~I~~~M~~~~~~~s~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFks 286 (388)
..|.++..+..++ .++++++. | -+.+++||.+.+++..|..
T Consensus 60 f~V~~~TEc~rVG--k~S~litl-g-------~~slLl~Fas~~d~~~F~~ 100 (117)
T 2oqb_A 60 CSVSRETECSRVG--RQSFIITL-G-------CNSVLIQFATPHDFCSFYN 100 (117)
T ss_dssp EEEETTSEEEEET--TTEEEEEE-T-------TEEEEEECSSHHHHHHHHH
T ss_pred EEecCCccceeec--CeEEEEEE-C-------CcEEEEEeCCHHHHHHHHH
Confidence 3555677776664 45777753 2 3679999999999999974
No 43
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=23.77 E-value=1.8e+02 Score=24.49 Aligned_cols=88 Identities=15% Similarity=0.341 Sum_probs=51.9
Q ss_pred EEEEE-EeeeEEeecc--cccceeee-EEEEEEEeCCCCcEEE-EEEeCCeeeeEeccccCcCceEeecCCCCcEEEEEe
Q psy15646 184 TVLFE-QRAKLYRFVD--KEWKERGV-GQLKLLKNKDTGKVRL-LMRRDIVHKICANHFLHQDMELKPMPNTKQAYIWFA 258 (388)
Q Consensus 184 e~lF~-~RaKLyrf~~--k~WKERGv-G~LKIlk~k~tgk~RL-LMRrdqv~KV~lN~~I~~~M~~~~~~~s~ks~~w~a 258 (388)
++|.. .-|-||.|+. ++|...|+ |.|-|-+.. ..++++ ||-|-+...++ ..|.++|.++... .-+++-.
T Consensus 25 ~Il~~a~~v~vY~f~~~~~~W~K~~iEGtLFv~~R~-~P~~~~iVlNR~~~~n~~--~~i~~~~~~e~~~---~~l~~r~ 98 (127)
T 2qkl_A 25 SIIDIASHVAVYQFDVGSQKWLKTSIEGTFFLVKDQ-RARVGYVILNRNSPENLY--LFINHPSNVHLVD---RYLIHRT 98 (127)
T ss_dssp EEEEEEEEEEEECC------CCEEEEEEEEEEEEET-TCCEEEEEEESSSSCCEE--EEECSGGGEEEET---TEEEEEE
T ss_pred HHhccCCeEEEEEecCCCCceEEcCcEEEEEEEEcc-CCceEEEEEcCCCCcCee--EecCCCceEEEeC---CEEEEEc
Confidence 34443 4789999985 79998886 888887655 456664 45455444443 3567788887643 2344422
Q ss_pred ecCCccccccceeeeecCChhhHHhh
Q psy15646 259 QDYADEVVSDEQLCAKFKLPEDAERF 284 (388)
Q Consensus 259 ~D~aDee~k~et~~IRFKt~e~A~eF 284 (388)
+ ..+-|-|=|-+.+++++.
T Consensus 99 -~------~~~i~GiWf~~~~d~~~i 117 (127)
T 2qkl_A 99 -E------NQHVVGLWMFDPNDMSRI 117 (127)
T ss_dssp -T------TTEEEEEEESSTHHHHHH
T ss_pred -C------CCcEEEEEEEchHHHHHH
Confidence 1 145667777777776654
No 44
>1tqz_A Necap1; endocytosis, structural genomics, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: b.55.1.11
Probab=20.82 E-value=3.1e+02 Score=23.52 Aligned_cols=100 Identities=17% Similarity=0.269 Sum_probs=63.2
Q ss_pred cccEEEEEEe-eeEEeecc---------cccce---eeeEEEEEEEeCCCCcEEEEEEeCCeeeeEecccc--CcCceEe
Q psy15646 181 ENETVLFEQR-AKLYRFVD---------KEWKE---RGVGQLKLLKNKDTGKVRLLMRRDIVHKICANHFL--HQDMELK 245 (388)
Q Consensus 181 EdEe~lF~~R-aKLyrf~~---------k~WKE---RGvG~LKIlk~k~tgk~RLLMRrdqv~KV~lN~~I--~~~M~~~ 245 (388)
+=|.+||..+ |-+|+.-+ .+|+. -=.|-|||.... .+.-|.+-...++.+.++..+ .++..++
T Consensus 6 ~~E~vL~v~~ev~VY~IPP~~s~~GyrA~dW~~~~~~wtGrlrv~~~g--~~~~I~LeD~~tGeLFA~cPv~~~~~~~VE 83 (133)
T 1tqz_A 6 EYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKG--KIAYIKLEDKVSGELFAQAPVEQYPGIAVE 83 (133)
T ss_dssp CCSCCCBCCSSEEEEECCSCCSSSSCCHHHHCCSSSCEEEEEEEECCS--SSEEEEEECSSCCSSCEEEEECSSCCCCEE
T ss_pred ceeEEEEEcCcEEEEecCCCCCCCCcccccCCCCCceeEEEEEEEEeC--CEEEEEEEeCCCCcEEEeCcccCCCCcceE
Confidence 3455555553 33555422 46763 468999997643 356666667778999999998 5677788
Q ss_pred ecCCCCcEEEEEeecCCccccccceeeeecCChhhHHhhc
Q psy15646 246 PMPNTKQAYIWFAQDYADEVVSDEQLCAKFKLPEDAERFR 285 (388)
Q Consensus 246 ~~~~s~ks~~w~a~D~aDee~k~et~~IRFKt~e~A~eFk 285 (388)
+.-.+.|-++.--.| +.++...+=|=|..-.+|=.|.
T Consensus 84 ~v~DSSRYFVlRv~d---~~gr~AfiGiGF~eR~dAFDF~ 120 (133)
T 1tqz_A 84 TVTDSSRYFVIRIQD---GTGRSAFIGIGFTDRGDAFDFN 120 (133)
T ss_dssp ECTTCCSCEEEEEEE---TTTEEEEEEEECSCHHHHHHHH
T ss_pred EeecCcCeEEEEEEC---CCCcEEEEeeeecccccccchH
Confidence 876676665554333 4455666666777666666654
Done!