BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1565
(146 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 82.8 bits (203), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D P N+ +FP+CF +I+ V VH NAG+SR+A IVI ++M A
Sbjct: 55 ILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSA 114
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQ 138
LVK RP I PN GF+ QL+ +++
Sbjct: 115 FSLVKNARPSICPNSGFMEQLRTYQE 140
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+YDE +L ++ D + +I S VH G+SRSA+ VIAY MK G +L +A
Sbjct: 55 VYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRA 114
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWE 137
+D VK+ R KPNP F+RQL+E++
Sbjct: 115 YDYVKERRTVTKPNPSFMRQLEEYQ 139
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D P N+ + FP +ID V VH NAGISRSA VIAYIM+ G+ A
Sbjct: 64 IADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDA 123
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQKHL 141
V++ R CI PN GF+ QL+E+E +L
Sbjct: 124 FAYVQERRFCINPNAGFVHQLQEYEAIYL 152
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D NLS+ FP+ +ID + V VHC AG+SRS T+ +AY+M+ + L L A
Sbjct: 56 ISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDA 115
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+DLVK+ + I PN F+ QL ++E+
Sbjct: 116 YDLVKRKKSNISPNFNFMGQLLDFER 141
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 55 DEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHD 114
D P NL++HF + +I C + VHC AG+SRS T+VIAYIM A
Sbjct: 59 DSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALH 118
Query: 115 LVKKVRPCIKPNPGFLRQLKEWEQ 138
V+ R C PN GF RQL+E+E+
Sbjct: 119 TVRAGRSCANPNVGFQRQLQEFEK 142
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D P + KHF +C +I C + VH AGISRS TIV AY+M GL
Sbjct: 58 VADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDV 117
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEW 136
+ +K RP PNPGF +QL+E+
Sbjct: 118 LEAIKATRPIANPNPGFRQQLEEF 141
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D NLS+ FP+ +ID + V VH AG+SRS T+ +AY+M+ + L L A
Sbjct: 59 ISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDA 118
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+DLVK+ + I PN F+ QL ++E+
Sbjct: 119 YDLVKRKKSNISPNFNFMGQLLDFER 144
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D NLS+ FP+ ++ID V VH AGISRS T+ +AY+M+ + L + A
Sbjct: 57 ISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDA 116
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+D+VK + I PN F+ QL ++E+
Sbjct: 117 YDIVKMKKSNISPNFNFMGQLLDFER 142
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+ +HC AG+SRSATIVIAY+MKH + + A+ VK RP I PN F+ QL E+E+
Sbjct: 86 LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 142
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+ +HC AG+SRSATIVIAY+MKH + + A+ VK RP I PN F+ QL E+E+
Sbjct: 90 LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 146
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
++D+P +L H ++ D + V+C G SRSA + AY+M+H G L +A
Sbjct: 63 VFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRA 122
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQ 138
+VK RP +PN GF QL+++EQ
Sbjct: 123 FQMVKSARPVAEPNLGFWAQLQKYEQ 148
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHC-HNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D P ++LS F +ID +D S + VHC G SRSAT+V+AY+M H + L A
Sbjct: 114 DLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAI 173
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQK 139
V K R C+ PN GFL+QL+E +++
Sbjct: 174 QQVAKNR-CVLPNRGFLKQLRELDKQ 198
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D ++S HF + +ID V VH AGISRS TI +AY+MK L +A
Sbjct: 57 VEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEA 116
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQKHLKDS 144
D +K+ R + PN GF+ QL ++E + L +
Sbjct: 117 FDYIKQRRSMVSPNFGFMGQLLQYESEILPST 148
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D +S F + +ID N V VH AGISRSATI +AY+M+ + L +A
Sbjct: 55 VEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEA 114
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQKHL 141
D VK+ R I PN F+ QL ++E + L
Sbjct: 115 FDFVKQRRGVISPNFSFMGQLLQFETQVL 143
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D P + +F I VHC AG+SRSAT+ IAY+MK + L +A
Sbjct: 77 LADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEA 136
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQKHLKDSQL 146
++ VK RP I+PN GF RQL ++E++ S +
Sbjct: 137 YNWVKARRPVIRPNVGFWRQLIDYERQLFGKSTV 170
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D P L F +I Q +HC AG+SRSA + +AY+MK+ + L A
Sbjct: 71 VADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDA 130
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWE 137
H K RP I+PN GF QL +E
Sbjct: 131 HTWTKSCRPIIRPNSGFWEQLIHYE 155
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 60 NLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKV 119
++S F + YID + + V VH AGISRSATI +AY+M + L +A + VK+
Sbjct: 62 DISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQR 121
Query: 120 RPCIKPNPGFLRQLKEWEQKHL 141
R I PN F+ QL ++E + L
Sbjct: 122 RSIISPNFSFMGQLLQFESQVL 143
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 65 FPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIK 124
P + I + + +HC G+SRSAT++IAYIMK+ L L ++DL+K I
Sbjct: 103 LPSLTSIIHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKIN 162
Query: 125 PNPGFLRQLKEWE 137
P+ G + QL EWE
Sbjct: 163 PSIGLIFQLMEWE 175
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHC-HNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D +NLS +F +ID V VHC G SRS T+VIAY+M +D+ A
Sbjct: 91 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL 150
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDSQL 146
+V++ R I PN GFL QL + + K+ +L
Sbjct: 151 SIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKL 182
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHC-HNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D +NLS +F +ID V VHC G SRS T+VIAY+M +D+ A
Sbjct: 90 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL 149
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDSQL 146
+V++ R I PN GFL QL + + K+ +L
Sbjct: 150 SIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKL 181
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 54 YDEPGYNLSKHFPDCFTYIDHCHND-QSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+D P +++S HF +I + + VHC G+SRSAT+V+AY+M + L L +A
Sbjct: 59 HDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEA 118
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQK 139
VK R I PN GFLRQL +++
Sbjct: 119 IKKVKDHRGII-PNRGFLRQLLALDRR 144
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 65 FPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIK 124
P + I + + +H G+SRSAT++IAYIMK+ L L ++DL+K I
Sbjct: 103 LPSLTSIIHAATTKREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKIN 162
Query: 125 PNPGFLRQLKEWE 137
P+ G + QL EWE
Sbjct: 163 PSIGLIFQLMEWE 175
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHCHN-DQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D P ++LS +F YI + Q V VHC G+SRSAT+V+A++M + + L +A
Sbjct: 106 DNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAI 165
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDS 144
V+ R I PN GFLRQL+ + + +++
Sbjct: 166 QTVQAHR-NICPNSGFLRQLQVLDNRLGRET 195
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 65 FPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIK 124
P + I + + +H G+SRSAT++IAYIMK+ L L ++DL+K I
Sbjct: 103 LPSLTSIIHAATTKREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKIN 162
Query: 125 PNPGFLRQLKEWE 137
P+ G + QL EWE
Sbjct: 163 PSIGLIFQLMEWE 175
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHC-HNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D +NLS +F +ID V VH G SRS T+VIAY+M +D+ A
Sbjct: 91 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSAL 150
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDSQL 146
+V++ R I PN GFL QL + + K+ +L
Sbjct: 151 SIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKL 182
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 54 YDEPGYNLSKHFPDCFTYIDHCHND-QSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+D P +++S HF +I + + VH G+SRSAT+V+AY+M + L L +A
Sbjct: 60 HDSPAFDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEA 119
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQK 139
VK R I PN GFLRQL +++
Sbjct: 120 IKKVKDHRGII-PNRGFLRQLLALDRR 145
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHCHN-DQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D P ++LS +F YI + Q V VHC G+SRSAT+V+A++M + L +A
Sbjct: 106 DNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAI 165
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDS 144
V+ R I PN GFLRQL+ + + +++
Sbjct: 166 QTVQAHRN-ICPNSGFLRQLQVLDNRLGRET 195
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I E G+ L P+ +I + V + G++++ IVIA++M + L A
Sbjct: 61 IVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINA 120
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQK 139
+ V+ + P I GF+ QLK +E+K
Sbjct: 121 FNKVQGLYPLIDIESGFILQLKLFEKK 147
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 71 YIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP--CIKPNPG 128
++D C N + + VHC AG+ R+ T++ YIMKH + A+ V+ RP I P
Sbjct: 261 FLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQ 320
Query: 129 FL--RQLKEW 136
FL +Q W
Sbjct: 321 FLVMKQTNLW 330
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D+ ++SK+F D ++ C V VH AG++RS +++AY+M L
Sbjct: 82 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPML 141
Query: 113 HDL-----VKKVRPCIKPNPGFLRQLKE 135
+ L ++ +R NP F RQ+ E
Sbjct: 142 YFLYVYHSMRDLRGAFVENPSFKRQIIE 169
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D+ ++SK+F D ++ C V VHC AG++RS ++AY+ L
Sbjct: 99 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESLPXL 158
Query: 113 HDL-----VKKVRPCIKPNPGFLRQLKE 135
+ L + +R NP F RQ+ E
Sbjct: 159 YFLYVYHSXRDLRGAFVENPSFKRQIIE 186
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 71 YIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP--CIKPNPG 128
++D C N + + VH AG+ R+ T++ YIMKH + A+ V+ RP I P
Sbjct: 261 FLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQ 320
Query: 129 FL--RQLKEW 136
FL +Q W
Sbjct: 321 FLVMKQTNLW 330
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIKPNPGFLRQLKEWEQK 139
VYVHC AG SRSAT+V AY+++ +A + + K+R I P L LKE+ ++
Sbjct: 92 VYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKE 149
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMG-----L 107
+ D+ ++SK+F D ++ C V VHC AG++RS ++AY+ L
Sbjct: 78 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKESSPXL 137
Query: 108 DLAQAHDLVKKVRPCIKPNPGFLRQLKE 135
+ + +R NP F RQ+ E
Sbjct: 138 YFLYVYHSXRDLRGAFVENPSFKRQIIE 165
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIKPNPGFLRQLKEWEQK 139
VYVH AG SRSAT+V AY+++ +A + + K+R I P L LKE+ ++
Sbjct: 93 VYVHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKE 150
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 69 FTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
T + +++ VHC GI R+ TI+ +Y++ GL++ A D V+ VRP
Sbjct: 79 LTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRP 131
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 72 IDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
+D + V VHC G R+ T++ Y++K GL A ++++RP
Sbjct: 81 VDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRP 130
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 69 FTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
T + +++ VH GI R+ TI+ +Y++ GL++ A D V+ VRP
Sbjct: 79 LTIMKWLLSEKEGNLVHSVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRP 131
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 72 IDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
+D + V VHC G R+ T + Y++K GL A ++++RP
Sbjct: 82 VDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRLRP 131
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 53 IYDEPGYNLSKHFPDCF-TYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQ 111
I D ++L P T + YVH AG R+ + + Y G L +
Sbjct: 79 IRDFDAFDLRXRLPAVVGTLYKAVKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXE 138
Query: 112 AHDLVKKVRPC 122
AH L+ R C
Sbjct: 139 AHKLLXSKRSC 149
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 62 SKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAY 100
+ F + + I +C S + VHC+AGI R+ T++ AY
Sbjct: 206 AASFDELLSVIKNCVTT-SPILVHCSAGIGRTGTLIGAY 243
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
V VHC GI+R+ +V Y+M +G+ +A D +K R
Sbjct: 116 VGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEKAR 154
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 62 SKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIV---IAYIMKHMGLDLAQAHDLVKK 118
S F + Y+ D V VHC+AGI R+ +V A + L + D+V+K
Sbjct: 192 SSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPIYPL-DIVRK 250
Query: 119 VR 120
+R
Sbjct: 251 MR 252
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 69 FTYIDHCHNDQSTVYVHCNAGISRSAT-----IVIAYIMKHMGLDLAQAHDLVKKVR 120
+Y+ H H + HC+AGI RS T +V+ I + + D++ DLV+ +R
Sbjct: 230 ISYMRHIHRS-GPIITHCSAGIGRSGTLICIDVVLGLISQDLDFDIS---DLVRCMR 282
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
Query: 68 CFTYIDHCHNDQST------VYVHCNAGISRSAT-IVIAYIMKHM---GLD 108
+++D + Q + + VHC+AGI R+ T IVI +M+++ GLD
Sbjct: 429 VLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLD 479
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
Query: 68 CFTYIDHCHNDQST------VYVHCNAGISRSAT-IVIAYIMKHM---GLD 108
+++D + Q + + VHC+AGI R+ T IVI +M+++ GLD
Sbjct: 209 VLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLD 259
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
Query: 68 CFTYIDHCHNDQST------VYVHCNAGISRSAT-IVIAYIMKHM---GLD 108
+++D + Q + + VHC+AGI R+ T IVI +M+++ GLD
Sbjct: 187 VLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLD 237
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 82 VYVHCNAGISRSATIVIAYI----MKHMGLDLAQAHDLVKKVRPCIKPNPGFLRQLKEW 136
V VHC+AGI R+ T++ AY ++ L +D+V +R + G +++++++
Sbjct: 222 VVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYDVVSAMR---RQRFGMVQRMEQY 277
>pdb|2QAG|A Chain A, Crystal Structure Of Human Septin Trimer 267
Length = 361
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
+ D PGY + + DCF I ++Q Y+H +G++R I
Sbjct: 99 VVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHII 142
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 70 TYIDHCH-----NDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
T+I C N + VHC G +R+ ++ A++++ M + A + RP
Sbjct: 127 TFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARP 183
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 70 TYIDHCH--NDQST---VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
T+I C N++S + VHC G +R+ ++ A++++ M + A + RP
Sbjct: 105 TFIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARP 161
>pdb|3FTQ|A Chain A, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|B Chain B, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|C Chain C, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
pdb|3FTQ|D Chain D, Crystal Structure Of Septin 2 In Complex With Gppnhp And
Mg2+
Length = 274
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
+ D PGY + + DCF I ++Q Y+H +G++R I
Sbjct: 67 VVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHII 110
>pdb|2QA5|A Chain A, Crystal Structure Of Sept2 G-Domain
pdb|2QA5|B Chain B, Crystal Structure Of Sept2 G-Domain
Length = 315
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
+ D PGY + + DCF I ++Q Y+H +G++R I
Sbjct: 99 VVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHII 142
>pdb|2QNR|A Chain A, Human Septin 2 In Complex With Gdp
pdb|2QNR|B Chain B, Human Septin 2 In Complex With Gdp
Length = 301
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
+ D PGY + + DCF I ++Q Y+H +G++R I
Sbjct: 80 VVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHII 123
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 76 HNDQSTVYVHCNAGISRSATIVIAYIMKHMG--LDLAQAHDLVKKVR 120
+D +HC AG R+ ++ AY++ H G L +A D +VR
Sbjct: 108 EDDNHVAAIHCKAGKGRTGVMICAYLL-HRGKFLKAQEALDFYGEVR 153
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 71 YIDHCHNDQSTVYVHCNAGISRSATIV 97
+ D +Q + VHC+AG+ RS T +
Sbjct: 227 FRDRIGAEQRPIVVHCSAGVGRSGTFI 253
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 245 VVVHCSAGIGRSGTFCLA 262
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 75 CHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
C S V VHC AG+ R A +++A + G+ A +++ R
Sbjct: 93 CEAPGSCVAVHCVAGLGR-APVLVALALIESGMKYEDAIQFIRQKR 137
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 217 VVVHCSAGIGRSGTFCLA 234
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 217 VVVHCSAGIGRSGTFCLA 234
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 75 CHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
C S V VHC AG+ R A +++A + G+ A +++ R
Sbjct: 96 CEAPGSCVAVHCVAGLGR-APVLVALALIESGMKYEDAIQFIRQKR 140
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 213 VVVHCSAGIGRSGTFCLA 230
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQ 111
+ +HC AG R+ T+V +++++ D A+
Sbjct: 117 IAIHCKAGKGRTGTLVSSWLLEDGKFDTAK 146
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 217 VVVHCSAGIGRSGTFCLA 234
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 223 VVVHCSAGIGRSGTFCLA 240
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 210 VVVHCSAGIGRSGTFCLA 227
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 211 VVVHCSAGIGRSGTFCLA 228
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 70 TYIDHCHNDQSTVYVHCNAGISRSATIVIAYIM 102
+ ++ N + VHC+AG+ R+ ++++ +M
Sbjct: 243 SMLEGTKNRHPPIVVHCSAGVGRTGVLILSELM 275
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 223 VVVHCSAGIGRSGTFCLA 240
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 215 VVVHCSAGIGRSGTFCLA 232
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 223 VVVHCSAGIGRSGTFCLA 240
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 82 VYVHCNAGISRSATIVIA 99
V VHC+AGI RS T +A
Sbjct: 218 VVVHCSAGIGRSGTFCLA 235
>pdb|1XXV|A Chain A, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
pdb|1XXV|B Chain B, Yersinia Yoph (Residues 163-468) Binds
Phosphonodifluoromethyl-Phe Containing Hexapeptide At
Two Sites
Length = 306
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 239 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|3U96|A Chain A, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
pdb|3U96|B Chain B, Crystal Structure Of Yophq357f(Catalytic Domain, Residues
163-468) In Complex With Pncs
Length = 306
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 239 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|1QZ0|A Chain A, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|1QZ0|B Chain B, Crystal Structure Of The Yersinia Pestis Phosphatase Yoph
In Complex With A Phosphotyrosyl Mimetic-Containing
Hexapeptide
pdb|2I42|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
Complexed With Vanadate, A Transition State Analogue
pdb|1YTN|A Chain A, Hydrolase
pdb|1YTW|A Chain A, Yersinia Ptpase Complexed With Tungstate
pdb|2Y2F|A Chain A, Crystal Structure Of Yersinia Pestis Yoph In Complex With
An Aminooxy-Containing Platform Compound For Inhibitor
Design
pdb|2YDU|A Chain A, Crystal Structure Of Yoph In Complex With
3-(1,1-Dioxido-3-Oxoisothiazolidin-5-Yl)benzaldeyde
Length = 306
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 239 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|1YPT|A Chain A, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|1YPT|B Chain B, Crystal Structure Of Yersinia Protein Tyrosine Phosphatase
At 2.5 Angstroms And The Complex With Tungstate
pdb|3BLU|A Chain A, Crystal Structure Yoph Complexed With Inhibitor Pvs
pdb|3BLT|A Chain A, Crystal Structures Of Yoph Complexed With Pvsn And Pvs,
Inhibitors Of Yoph Which Co-Valent Bind To Cys Of Active
Site
Length = 305
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 238 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 274
>pdb|3BM8|A Chain A, Crystal Structure Of Yoph Mutant D356a Complexed With
Irreversible Inhibitor Pvsn
Length = 305
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 238 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 274
>pdb|1PA9|A Chain A, Yersinia Protein-Tyrosine Phosphatase Complexed With Pncs
(Yop51,Pasteurella X,Ptpase,Yop51delta162) (Catalytic
Domain, Residues 163-468) Mutant With Cys 235 Replaced
By Arg (C235r)
Length = 284
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 217 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 253
>pdb|3F99|A Chain A, W354f Yersinia Enterocolitica Ptpase Apo Form
pdb|3F9A|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Tungstate
pdb|3F9B|A Chain A, W354f Yersinia Enterocolitica Ptpase Complexed With
Divanadate
Length = 306
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 84 VHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
+HC AG+ R+A ++ A M D+V ++R
Sbjct: 239 IHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMR 275
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHM 105
+ VHC+AG+ R+ T V+ M M
Sbjct: 228 IVVHCSAGVGRTGTFVVIDAMLDM 251
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 82 VYVHCNAGISRSAT-IVIAYIMKHM----GLDLAQAHDLVKKVRP 121
+ VHC+AG+ R+ T IVI +M M +D+ + ++ RP
Sbjct: 226 IVVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVFEFVSRIRNQRP 270
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 82 VYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIK 124
+ VHC+AG R+ ++ IM LD+A+ +V + C+K
Sbjct: 237 IVVHCSAGAGRTGCYIVIDIM----LDMAEREGVV-DIYNCVK 274
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 81 TVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVR 120
T+ VHC AG+ R+ +V ++++ + A L+++ R
Sbjct: 111 TIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKR 150
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 25.8 bits (55), Expect = 8.1, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 78 DQSTVYVHCNAGISRSAT 95
D V VHC+AGI R+ T
Sbjct: 451 DAGPVVVHCSAGIGRTGT 468
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 79 QSTVYVHCNAGISRSATIV 97
+S + VHC+AG+ R+ T +
Sbjct: 237 ESPILVHCSAGVGRTGTFI 255
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 79 QSTVYVHCNAGISRSATIV 97
+S + VHC+AG+ R+ T +
Sbjct: 237 ESPILVHCSAGVGRTGTFI 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.139 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,042,154
Number of Sequences: 62578
Number of extensions: 115399
Number of successful extensions: 518
Number of sequences better than 100.0: 102
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 103
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)