RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1565
(146 letters)
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 98.7 bits (245), Expect = 7e-28
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
I D NLS+ FP+ ++ID V VH AGISRS T+ +AY+M+ + L + A
Sbjct: 57 ISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDA 116
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQK 139
+D+VK + I PN F+ QL ++E+
Sbjct: 117 YDIVKMKKSNISPNFNFMGQLLDFERT 143
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 95.2 bits (236), Expect = 1e-26
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 53 IYDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQA 112
+ D +S F + +ID N V VH AGISRSATI +AY+M+ + L +A
Sbjct: 55 VEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEA 114
Query: 113 HDLVKKVRPCIKPNPGFLRQLKEWEQKHL 141
D VK+ R I PN F+ QL ++E + L
Sbjct: 115 FDFVKQRRGVISPNFSFMGQLLQFETQVL 143
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 95.6 bits (237), Expect = 2e-26
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 55 DEPGYNLSKHFPDCFTYIDHCHNDQS-TVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
D +NLS +F +ID ++ V VHC G SRS T+VIAY+M +D+ A
Sbjct: 85 DTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSAL 144
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQKHLKDSQL 146
+V++ R I PN GFL QL + + K+ +L
Sbjct: 145 SIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKL 176
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 76.7 bits (188), Expect = 7e-19
Identities = 15/86 (17%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 55 DEPGYNLSKHFPD-CFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAH 113
+ P ++ F C + + + VHC G +R+ ++ A++++ M + A
Sbjct: 92 ECPTTENTETFIRLCERFNERSPP--ELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAV 149
Query: 114 DLVKKVRPCIKPNPGFLRQLKEWEQK 139
+ RP +L++L
Sbjct: 150 ATFAQARPPGIYKGDYLKELFRRYGD 175
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 68.1 bits (166), Expect = 8e-16
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 64 HFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP-- 121
++D C N + + VH AG+ R+ T++ YIMKH + A+ V+ RP
Sbjct: 94 TDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGS 153
Query: 122 CIKPNPGFL--RQLKEWEQKHLKDSQL 146
I P FL +Q W + +L
Sbjct: 154 VIGPQQQFLVMKQTNLWLEGDYFRQKL 180
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 51.2 bits (122), Expect = 2e-09
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 2/79 (2%)
Query: 57 PGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMG-LDLAQAHDL 115
P L K F + +D +HC AG R+ ++ AY++ L +A D
Sbjct: 83 PQLELIKPFCEDLDQW-LSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDF 141
Query: 116 VKKVRPCIKPNPGFLRQLK 134
+VR K Q +
Sbjct: 142 YGEVRTRDKKGVTIPSQRR 160
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 50.8 bits (121), Expect = 3e-09
Identities = 13/84 (15%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Query: 58 GYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHM-GLDLAQAHDLV 116
G + + C + +H G+ RS + ++ + QA D +
Sbjct: 88 GTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSL 147
Query: 117 KKVR-PCIKPNPGFLRQLKEWEQK 139
+ +R L E+ K
Sbjct: 148 RDLRGSGAIQTIKQYNYLHEFRDK 171
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 45.4 bits (107), Expect = 2e-07
Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 57 PGYNLSKHFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLV 116
P + + + VHC AG+ R+ +V +++ G+ A +
Sbjct: 68 PSNQIVDDWLSLVKIKFREEPGCC-IAVHCVAGLGRAPVLVALALIEG-GMKYEDAVQFI 125
Query: 117 KKVRPCIKPNPGFLRQLKEWEQK 139
++ R N L L+++ K
Sbjct: 126 RQKRRGA-FNSKQLLYLEKYRPK 147
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 33.1 bits (75), Expect = 0.007
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 67 DCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAY-IMKHMGLDLAQAHDLVKKVRPCIKP 125
D F + ++ HC AG+ R+ ++ ++K+ + L ++
Sbjct: 200 DRFLAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHEIGGFYYG 259
Query: 126 NPGFLRQLKE 135
+ K+
Sbjct: 260 EFPIKTKDKD 269
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 29.8 bits (66), Expect = 0.094
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 64 HFPDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDL-----VKK 118
F + + D V VHC+AGI R+ T ++ I+ + + D+ ++
Sbjct: 219 DFLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQM 278
Query: 119 VR 120
VR
Sbjct: 279 VR 280
>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase
{Toxoplasma gondii [TaxId: 5811]}
Length = 233
Score = 29.2 bits (65), Expect = 0.15
Identities = 10/34 (29%), Positives = 11/34 (32%), Gaps = 5/34 (14%)
Query: 45 EGVTEGKTIYDEPGYNLSKHFPDCFTYIDHCHND 78
+G E I D YN D F HC
Sbjct: 16 KGRIEPMYIPDNTFYNA-----DDFLVPPHCKPY 44
>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
domain {Yersinia enterocolitica [TaxId: 630]}
Length = 283
Score = 28.6 bits (63), Expect = 0.24
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 63 KHFPDCFTYIDHCHNDQSTVYVHCNAGISRSAT---IVIAYIMKHMGLDLAQAHDLVKKV 119
++ + + + +H AG+ R+A + ++ L + V ++
Sbjct: 195 RNMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMCMNDSRNSQLSVEDM---VSQM 251
Query: 120 R 120
R
Sbjct: 252 R 252
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli
[TaxId: 562]}
Length = 459
Score = 28.7 bits (63), Expect = 0.27
Identities = 10/108 (9%), Positives = 26/108 (24%), Gaps = 1/108 (0%)
Query: 20 IISVGRSDRVTEGETKEGVTEGKTKEGVTEGKTIYDEPGYNLSKHFPDCFTYIDHCHNDQ 79
+++ G+ + +G E K DH + Q
Sbjct: 83 VLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQ 142
Query: 80 STVYVHCNAGISRSATIVIAYIMKHMGLDLAQAHDLVKKVRPCIKPNP 127
ST + + + ++ + + + +K
Sbjct: 143 STNDAYPTG-FRIAVYSSLIKLVDAINQLREGFERKAVEFQDILKMGR 189
>g2mev.1 b.121.4.1 (4:,2:) Mengo encephalomyocarditis virus coat
proteins {Mengovirus [TaxId: 12107]}
Length = 307
Score = 27.9 bits (62), Expect = 0.47
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 54 YDEPGYNLSKHFPDCFTYIDHCHNDQSTVYVHC--NAGISRSATIVIAYI 101
+ P ++ +DH + Q T+Y H N + + + + Y+
Sbjct: 200 DNLPNGTRTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYV 249
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 288
Score = 27.1 bits (59), Expect = 0.77
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 73 DHCHNDQSTVYVHCNAGISRSATIVIAYIMKHM 105
+ VHC+AG+ R+ T V+ M M
Sbjct: 213 ACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDM 245
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 272
Score = 25.9 bits (56), Expect = 1.8
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 78 DQSTVYVHCNAGISRSATIVIAYIMKHMGLD 108
V HC AG R+ V+A +++ +GLD
Sbjct: 149 AGRPVLTHCFAGKDRTG-FVVALVLEAVGLD 178
>g1tme.1 b.121.4.1 (4:,2:) Theilovirus capsid proteins {Theiler's
murine encephalomyelitis virus, strain da [TaxId:
12124]}
Length = 280
Score = 25.9 bits (57), Expect = 2.0
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 29 VTEGETKEGVTEG--KTKEGVTEGKTIYDEPGYNLSKHFP--DCFTYIDHCHNDQSTVYV 84
E T +G G + + T T G + F ++H + Q TVY
Sbjct: 145 APEFYTGKGTKTGDMEPTDPFTMDTTWRAPQGAPTGYRYDSRTGFFAMNHQNQWQWTVYP 204
Query: 85 H--CNAGISRSATIVIAYI 101
H N + + + + Y+
Sbjct: 205 HQILNLRTNTTVDLEVPYV 223
>d1m7xa2 b.71.1.1 (A:623-728) 1,4-alpha-glucan branching enzyme
{Escherichia coli [TaxId: 562]}
Length = 106
Score = 25.2 bits (55), Expect = 2.1
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 66 PDCFTYIDHCHNDQSTVYVHCNAGISRSATIVIA 99
P F ++ ++S V + + IV +
Sbjct: 1 PYGFEWLVVDDKERS-VLIFVRRDKEGNEIIVAS 33
>d1mo6a2 d.48.1.1 (A:270-329) RecA protein, C-terminal domain
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 60
Score = 23.5 bits (51), Expect = 3.7
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 107 LDLAQAHDLVKKVRPCIKPNPGFLRQLKEWEQKHLKD 143
+D+ L++K L Q KE + L +
Sbjct: 7 IDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNFLVE 43
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot
basidiomycete (Phanerochaete chrysosporium) [TaxId:
5306]}
Length = 343
Score = 25.0 bits (54), Expect = 3.9
Identities = 5/33 (15%), Positives = 6/33 (18%)
Query: 64 HFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
F D + I TI
Sbjct: 45 VFHDSIAISPAMEAKGKFGGGGADGSIMIFDTI 77
>d1muka_ e.8.1.4 (A:) Reovirus polymerase lambda3 {Reovirus [TaxId:
10891]}
Length = 1264
Score = 24.9 bits (54), Expect = 5.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 90 ISRSATIVIAYIMKHMGLDLAQAHDLVKKVRP 121
+S T+ YI HM L +++KV P
Sbjct: 537 VSAPHTLTADYINYHMNLSPTSGSAVIEKVIP 568
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase)
{Arthromyces ramosus [TaxId: 5451]}
Length = 336
Score = 24.2 bits (52), Expect = 7.4
Identities = 4/33 (12%), Positives = 7/33 (21%)
Query: 64 HFPDCFTYIDHCHNDQSTVYVHCNAGISRSATI 96
F D + + I + I
Sbjct: 46 VFHDAIGFSPALTAAGQFGGGGADGSIIAHSNI 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.428
Gapped
Lambda K H
0.267 0.0612 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 574,377
Number of extensions: 24684
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 25
Length of query: 146
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 69
Effective length of database: 1,350,386
Effective search space: 93176634
Effective search space used: 93176634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (22.9 bits)