Query psy15654
Match_columns 189
No_of_seqs 163 out of 1378
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 18:12:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zdn_A Ubiquitin-conjugating e 100.0 2.6E-53 8.8E-58 328.3 18.1 156 3-159 3-158 (158)
2 4gpr_A Ubiquitin-conjugating e 100.0 2.1E-52 7E-57 321.0 20.3 150 11-161 2-151 (151)
3 2c4o_A Ubiquitin-conjugating e 100.0 1E-51 3.5E-56 321.3 20.3 156 4-160 10-165 (165)
4 1ayz_A UBC2, ubiquitin-conjuga 100.0 4.6E-52 1.6E-56 324.4 18.1 153 10-163 1-153 (169)
5 2c2v_B Ubiquitin-conjugating e 100.0 2E-52 6.9E-57 322.0 14.5 150 11-161 3-152 (154)
6 2ayv_A Ubiquitin-conjugating e 100.0 1.5E-51 5.1E-56 320.6 19.2 152 7-159 15-166 (166)
7 2aak_A UBC1, ubiquitin conjuga 100.0 1.8E-51 6.3E-56 316.0 18.8 151 10-161 1-151 (152)
8 1z2u_A Ubiquitin-conjugating e 100.0 1.7E-51 5.8E-56 315.6 18.5 149 11-160 2-150 (150)
9 2bep_A Ubiquitin-conjugating e 100.0 4.2E-51 1.5E-55 316.1 19.9 153 9-161 4-159 (159)
10 2r0j_A Ubiquitin carrier prote 100.0 1.6E-51 5.6E-56 315.4 16.7 147 14-161 2-148 (149)
11 1yh2_A HSPC150 protein similar 100.0 6.7E-51 2.3E-55 317.9 20.4 152 11-163 2-157 (169)
12 2ucz_A UBC7, ubiquitin conjuga 100.0 1.2E-50 4.1E-55 315.3 19.0 150 10-160 1-164 (165)
13 1fxt_A Ubiquitin-conjugating e 100.0 2.8E-51 9.5E-56 314.0 14.9 147 14-160 2-149 (149)
14 3k9o_A Ubiquitin-conjugating e 100.0 7.7E-51 2.6E-55 325.6 18.0 154 10-163 2-158 (201)
15 1jat_A Ubiquitin-conjugating e 100.0 2.2E-51 7.6E-56 316.5 14.2 149 13-162 5-153 (155)
16 2pwq_A Ubiquitin conjugating e 100.0 6.2E-51 2.1E-55 328.8 17.2 156 8-163 18-173 (216)
17 2e2c_A Ubiquitin conjugating e 100.0 9.9E-51 3.4E-55 313.2 17.6 149 10-160 6-154 (156)
18 3h8k_A Ubiquitin-conjugating e 100.0 2.5E-50 8.7E-55 313.2 19.3 148 12-160 2-163 (164)
19 3rcz_B SUMO-conjugating enzyme 100.0 1.4E-50 4.8E-55 314.3 17.8 149 11-160 8-163 (163)
20 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.7E-50 5.8E-55 321.3 18.6 149 12-160 31-192 (193)
21 2gjd_A Ubiquitin-conjugating e 100.0 2E-50 6.8E-55 311.8 17.7 150 10-160 1-157 (157)
22 3bzh_A Ubiquitin-conjugating e 100.0 7.6E-50 2.6E-54 317.9 20.1 148 12-160 47-194 (194)
23 2grr_A Ubiquitin-conjugating e 100.0 5.1E-50 1.7E-54 310.7 18.2 152 9-161 3-161 (161)
24 3e46_A Ubiquitin-conjugating e 100.0 7.2E-50 2.5E-54 329.1 20.2 158 6-163 50-210 (253)
25 3fn1_B NEDD8-conjugating enzym 100.0 2E-49 6.9E-54 309.0 18.2 156 3-160 4-167 (167)
26 1wzv_A Ubiquitin-conjugating e 100.0 2.2E-49 7.6E-54 305.3 17.5 148 13-162 4-153 (155)
27 1i7k_A Ubiquitin-conjugating e 100.0 9.2E-50 3.1E-54 313.8 15.6 150 10-161 27-176 (179)
28 1tte_A Ubiquitin-conjugating e 100.0 2E-49 6.8E-54 319.8 12.9 151 14-164 3-154 (215)
29 2y9m_A Ubiquitin-conjugating e 100.0 3.5E-48 1.2E-52 303.3 18.4 152 9-160 2-168 (172)
30 1yrv_A Ubiquitin-conjugating l 100.0 7.3E-49 2.5E-53 306.2 14.3 149 8-157 18-168 (169)
31 3rz3_A Ubiquitin-conjugating e 100.0 4.4E-48 1.5E-52 305.5 17.7 150 11-161 5-174 (183)
32 2onu_A Ubiquitin-conjugating e 100.0 5.6E-49 1.9E-53 302.1 11.0 145 14-161 3-148 (152)
33 2awf_A Ubiquitin-conjugating e 100.0 6.4E-48 2.2E-52 301.8 13.7 144 10-154 14-172 (172)
34 2z5d_A Ubiquitin-conjugating e 100.0 3.6E-48 1.2E-52 304.5 11.6 146 13-162 25-171 (179)
35 1c4z_D UBCH7, ubiquitin conjug 100.0 4.4E-48 1.5E-52 297.8 11.2 147 14-162 3-151 (154)
36 1y8x_A Ubiquitin-conjugating e 100.0 6.3E-47 2.2E-51 293.0 16.8 142 12-157 5-147 (160)
37 2nvu_C NEDD8-conjugating enzym 100.0 1.5E-46 5.1E-51 295.9 17.2 147 8-158 21-168 (180)
38 1yf9_A Ubiquitin carrier prote 100.0 4.4E-47 1.5E-51 296.7 13.4 145 13-161 12-157 (171)
39 4ddg_A Ubiquitin-conjugating e 100.0 3.7E-46 1.3E-50 325.5 19.5 150 12-162 2-151 (399)
40 3o2u_A NEDD8-conjugating enzym 100.0 2.8E-45 9.6E-50 290.8 16.6 147 9-159 25-178 (190)
41 4ds2_A Ubiquitin-conjugating e 100.0 8.4E-45 2.9E-49 282.9 11.5 142 10-152 5-163 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 4.1E-43 1.4E-47 296.7 14.5 167 8-175 71-260 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 1.3E-42 4.4E-47 267.6 9.6 134 8-143 16-156 (156)
44 2fo3_A Ubiquitin-conjugating e 100.0 1.3E-41 4.5E-46 253.2 13.5 116 13-129 6-122 (125)
45 2a4d_A Ubiquitin-conjugating e 100.0 1.4E-41 4.9E-46 262.6 13.9 130 8-137 20-156 (160)
46 2h2y_A Ubiquitin-conjugating e 100.0 7E-41 2.4E-45 252.7 15.8 115 13-128 20-135 (136)
47 1jat_B Ubiquitin-conjugating e 100.0 9.2E-42 3.1E-46 258.1 7.1 127 13-140 6-138 (138)
48 2hlw_A Ubiquitin-conjugating e 100.0 1.3E-40 4.4E-45 259.7 9.8 127 11-137 33-166 (170)
49 2a7l_A Hypothetical ubiquitin- 100.0 4.5E-40 1.6E-44 248.1 10.8 115 8-124 18-136 (136)
50 2f4w_A Ubiquitin-conjugating e 100.0 2.1E-39 7.3E-44 256.4 15.1 127 1-131 3-132 (187)
51 1zuo_A Hypothetical protein LO 100.0 2.1E-39 7.1E-44 256.3 4.5 144 8-160 22-182 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 4.9E-28 1.7E-32 185.4 4.2 100 11-117 30-144 (172)
53 3r3q_A Suppressor protein STP2 99.8 4.9E-20 1.7E-24 141.9 9.6 113 16-130 31-161 (162)
54 3kpa_A Probable ubiquitin fold 99.8 8.7E-20 3E-24 136.9 2.3 90 11-110 32-132 (168)
55 3obq_A Tumor susceptibility ge 99.5 1.9E-14 6.5E-19 108.9 7.0 78 40-124 51-137 (146)
56 2ebm_A RWD domain-containing p 96.0 0.033 1.1E-06 40.0 8.0 67 15-83 12-78 (128)
57 2yz0_A Serine/threonine-protei 95.6 0.11 3.7E-06 37.7 9.6 69 13-83 10-85 (138)
58 2day_A Ring finger protein 25; 95.5 0.088 3E-06 37.7 8.5 68 17-84 12-83 (128)
59 2daw_A RWD domain containing p 95.1 0.25 8.7E-06 36.7 10.3 75 5-83 6-98 (154)
60 3zqs_A E3 ubiquitin-protein li 94.2 0.46 1.6E-05 36.7 9.8 83 16-123 4-86 (186)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 93.4 0.34 1.2E-05 34.9 7.6 69 14-83 11-86 (137)
62 2ebk_A RWD domain-containing p 92.1 0.26 8.9E-06 35.2 5.4 65 17-82 11-78 (128)
63 2dax_A Protein C21ORF6; RWD do 88.4 0.34 1.2E-05 35.8 3.3 23 61-83 74-96 (152)
64 2cwb_A Chimera of immunoglobul 86.6 0.13 4.5E-06 36.3 0.0 35 127-161 22-56 (108)
65 3u3c_B Paxillin LD2 peptide; 4 67.5 4 0.00014 20.5 2.0 20 14-33 6-25 (26)
66 3zqs_A E3 ubiquitin-protein li 29.2 51 0.0018 25.1 3.7 56 59-120 123-180 (186)
67 2fkn_A Urocanate hydratase; ro 28.7 1.1E+02 0.0038 27.1 6.1 27 135-161 279-305 (552)
68 1x87_A Urocanase protein; stru 28.2 1.1E+02 0.0039 27.0 6.1 28 134-161 277-304 (551)
69 1uwk_A Urocanate hydratase; hy 27.8 1.2E+02 0.004 26.9 6.1 28 134-161 282-309 (557)
70 2bum_A Protocatechuate 3,4-dio 25.4 57 0.002 25.2 3.4 25 58-82 109-138 (209)
71 3rls_A YAF9, protein AF-9 homo 24.2 1.7E+02 0.0057 22.0 5.7 45 40-86 30-74 (175)
No 1
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-53 Score=328.27 Aligned_cols=156 Identities=67% Similarity=1.153 Sum_probs=149.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEee
Q psy15654 3 SMSNVENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFL 82 (189)
Q Consensus 3 ~~s~~~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 82 (189)
..|+.++++.++.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.
T Consensus 3 ~~~~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 3 MNSNVENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred ccccccccCHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHc
Q psy15654 83 TKIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHA 159 (189)
Q Consensus 83 t~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a 159 (189)
|+||||||+ .+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||
T Consensus 83 t~i~HPnv~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 83 TKIFHPNVG-ANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp SCCCCTTBC-TTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred cCcccCCCC-CCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 999999999 8899999999999999999999999999999999999999999999999999999999999999998
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2.1e-52 Score=321.00 Aligned_cols=150 Identities=33% Similarity=0.658 Sum_probs=147.0
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
+..+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 91 DTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 91 ~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
+ .+|+||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|.+|+++|.++||+||++||++
T Consensus 82 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~p 151 (151)
T 4gpr_A 82 N-KNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTRMYARP 151 (151)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_pred C-CCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999985
No 3
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1e-51 Score=321.31 Aligned_cols=156 Identities=35% Similarity=0.641 Sum_probs=147.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 4 MSNVENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 4 ~s~~~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
+|-.++..+.+.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 10 ~~~~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T 89 (165)
T 2c4o_A 10 MSGLVPRGSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTT 89 (165)
T ss_dssp ------CCHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred ccccccCCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEec
Confidence 45567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 84 KIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 84 ~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
+||||||+ .+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+
T Consensus 90 ~i~HPnV~-~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 90 RIYHPNIN-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CCCBTTBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCcCCcCC-CCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999 89999999999999999999999999999999999999999999999999999999999999999995
No 4
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=4.6e-52 Score=324.38 Aligned_cols=153 Identities=33% Similarity=0.640 Sum_probs=147.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPN 89 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 89 (189)
|+..+.+||++|+++|++.+++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 80 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPN 80 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCC
Confidence 35578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccccc
Q psy15654 90 VDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQASK 163 (189)
Q Consensus 90 I~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 163 (189)
|+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++++++|.++||+||++||+...
T Consensus 81 I~-~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~~~~ 153 (169)
T 1ayz_A 81 VY-ANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWEDDM 153 (169)
T ss_dssp BC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHT
T ss_pred CC-CCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcCCCc
Confidence 99 79999999999999999999999999999999999999999999999999999999999999999998654
No 5
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2e-52 Score=322.02 Aligned_cols=150 Identities=36% Similarity=0.652 Sum_probs=143.5
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
|.++.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 3 s~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 82 (154)
T 2c2v_B 3 SAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 82 (154)
T ss_dssp SCSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcC
Confidence 34566999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 91 DTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 91 ~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
+ .+|+|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+.
T Consensus 83 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp C-TTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred c-cCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999974
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-51 Score=320.65 Aligned_cols=152 Identities=36% Similarity=0.631 Sum_probs=145.5
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccc
Q psy15654 7 VENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIF 86 (189)
Q Consensus 7 ~~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 86 (189)
.++..+.+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||
T Consensus 15 ~~~~~~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 94 (166)
T 2ayv_A 15 ENLYFQGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIY 94 (166)
T ss_dssp ----CTTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred ccccCcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCc
Confidence 35567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHc
Q psy15654 87 HPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHA 159 (189)
Q Consensus 87 HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a 159 (189)
||||+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||
T Consensus 95 HPNI~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 95 HPNIN-SQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp BTTBC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCcCC-CCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 99999 8999999999999999999999999999999999999999999999999999999999999999998
No 7
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=1.8e-51 Score=316.01 Aligned_cols=151 Identities=34% Similarity=0.667 Sum_probs=146.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPN 89 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 89 (189)
|+..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCC
Confidence 45578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 90 VDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 90 I~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
|+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|.+|+++|.++||+||++||+.
T Consensus 81 v~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 151 (152)
T 2aak_A 81 IY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTA 151 (152)
T ss_dssp BC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CC-CCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99 799999999999999999999999999999999999999999999999999999999999999999963
No 8
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.7e-51 Score=315.56 Aligned_cols=149 Identities=36% Similarity=0.657 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
|..+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 91 DTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 91 ~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
+ .+|+||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+
T Consensus 82 ~-~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 82 N-SNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred C-CCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999995
No 9
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=4.2e-51 Score=316.14 Aligned_cols=153 Identities=25% Similarity=0.609 Sum_probs=147.0
Q ss_pred CCCHHHHHHHHHHHHHhhcC---CCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccc
Q psy15654 9 NLSPQIIRRVSKELQDLTKT---PPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKI 85 (189)
Q Consensus 9 ~~s~~~~kRL~~E~~~l~~~---~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 85 (189)
.|+..+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 46788999999999999985 578999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 86 FHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 86 ~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
|||||+..+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||++||.+
T Consensus 84 ~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 159 (159)
T 2bep_A 84 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 159 (159)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhcC
Confidence 9999995599999999999999999999999999999999999999999999999999999999999999999963
No 10
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.6e-51 Score=315.35 Aligned_cols=147 Identities=39% Similarity=0.758 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccCC
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDTK 93 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~~ 93 (189)
+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~-~ 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNID-K 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBC-T
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCC-C
Confidence 358999999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred CCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 94 NGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 94 ~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
+|+||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||++
T Consensus 81 ~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 81 LGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp TCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 11
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.7e-51 Score=317.89 Aligned_cols=152 Identities=35% Similarity=0.656 Sum_probs=147.3
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
|.++.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCC----CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccccc
Q psy15654 91 DTKNGEICVNTLK----KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQASK 163 (189)
Q Consensus 91 ~~~~G~iCl~~l~----~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 163 (189)
+ .+|.|||++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+...
T Consensus 82 ~-~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~~ 157 (169)
T 1yh2_A 82 D-SAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQKQ 157 (169)
T ss_dssp C-TTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred C-cCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccccc
Confidence 9 99999999998 899999999999999999999999999999999999999999999999999999999644
No 12
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.2e-50 Score=315.35 Aligned_cols=150 Identities=34% Similarity=0.604 Sum_probs=144.3
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecC-CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINE-EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHP 88 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~-~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 88 (189)
|++.+.+||++|+++|++++++||++.+.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 567899999999999999999999999875 6999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCC-------------CCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHH
Q psy15654 89 NVDTKNGEICVNTL-------------KKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMT 155 (189)
Q Consensus 89 nI~~~~G~iCl~~l-------------~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~ 155 (189)
||+ .+|+|||++| .++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 81 Nv~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~ 159 (165)
T 2ucz_A 81 NIY-PNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLSI 159 (165)
T ss_dssp TBC-TTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCC-CCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 999 8999999999 68999999999999999999999999999999999999999999999999999
Q ss_pred HHHcc
Q psy15654 156 EIHAQ 160 (189)
Q Consensus 156 ~~~a~ 160 (189)
++++.
T Consensus 160 ~~~~~ 164 (165)
T 2ucz_A 160 LKSLG 164 (165)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99975
No 13
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.8e-51 Score=314.05 Aligned_cols=147 Identities=31% Similarity=0.642 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCC-CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCINEE-DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~~~~-d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
+.+||++|+++|++++++||++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 468999999999999999999999887 9999999999999999999999999999999999999999999999999993
Q ss_pred CCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 93 KNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 93 ~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
.+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||++||+
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 39999999999999999999999999999999999999999999999999999999999999999995
No 14
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=7.7e-51 Score=325.58 Aligned_cols=154 Identities=25% Similarity=0.603 Sum_probs=145.8
Q ss_pred CCHHHHHHHHHHHHHhhcC---CCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccc
Q psy15654 10 LSPQIIRRVSKELQDLTKT---PPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIF 86 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~---~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 86 (189)
|+..+.+||++||++|+++ ++.||++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 81 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 81 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcc
Confidence 4556789999999999987 3689999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccccc
Q psy15654 87 HPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQASK 163 (189)
Q Consensus 87 HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 163 (189)
||||+..+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|.+|+++|.++||+||++||+...
T Consensus 82 HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 158 (201)
T 3k9o_A 82 HPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAPV 158 (201)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccccc
Confidence 99999559999999999999999999999999999999999999999999999999999999999999999998743
No 15
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.2e-51 Score=316.50 Aligned_cols=149 Identities=34% Similarity=0.684 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
.+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~- 83 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID- 83 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC-
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC-
Confidence 3569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 93 KNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 93 ~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
.+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||++.
T Consensus 84 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~~ 153 (155)
T 1jat_A 84 RLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKKK 153 (155)
T ss_dssp TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEEC
T ss_pred CCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 16
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=6.2e-51 Score=328.80 Aligned_cols=156 Identities=32% Similarity=0.636 Sum_probs=148.9
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccc
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFH 87 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 87 (189)
...++.+.+||++|+++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||
T Consensus 18 ~~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 18 YFQGSKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp -CCSCHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 44566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccccc
Q psy15654 88 PNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQASK 163 (189)
Q Consensus 88 PnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~ 163 (189)
|||+..+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+...
T Consensus 98 PNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~~~ 173 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATGPK 173 (216)
T ss_dssp TTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCCC-
T ss_pred CCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCCCc
Confidence 9999568999999999999999999999999999999999999999999999999999999999999999998754
No 17
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-51 Score=313.16 Aligned_cols=149 Identities=28% Similarity=0.531 Sum_probs=144.5
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPN 89 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 89 (189)
++..+.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 85 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPN 85 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCC
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 90 VDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 90 I~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
|+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++| +|+++|.++||+||++||.
T Consensus 86 v~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~ 154 (156)
T 2e2c_A 86 VD-QSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQS 154 (156)
T ss_dssp BC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHH
T ss_pred Cc-cCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhcc
Confidence 99 799999999999999999999999999999999999999999999999 8999999999999999986
No 18
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.5e-50 Score=313.18 Aligned_cols=148 Identities=30% Similarity=0.567 Sum_probs=143.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEEecCC-CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 12 PQIIRRVSKELQDLTKTPPEGIHVCINEE-DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 12 ~~~~kRL~~E~~~l~~~~~~gi~~~~~~~-d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
..+.+||++|+++|+++++.||++.+.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 46889999999999999999999998766 99999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCC-------------CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Q psy15654 91 DTKNGEICVNTLK-------------KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEI 157 (189)
Q Consensus 91 ~~~~G~iCl~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~ 157 (189)
+ .+|+||+++|. ++|+|++||.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||++
T Consensus 82 ~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~ 160 (164)
T 3h8k_A 82 Y-PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 160 (164)
T ss_dssp C-TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred C-CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9 89999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred Hcc
Q psy15654 158 HAQ 160 (189)
Q Consensus 158 ~a~ 160 (189)
++.
T Consensus 161 s~~ 163 (164)
T 3h8k_A 161 SLG 163 (164)
T ss_dssp HHT
T ss_pred hhc
Confidence 975
No 19
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-50 Score=314.28 Aligned_cols=149 Identities=28% Similarity=0.501 Sum_probs=143.5
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCC-----CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEE-----DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKI 85 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~-----d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 85 (189)
|.++.+||++|+++|++++++||++.|.++ |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 668999999999999999999999998866 899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCeeeccCCCC--CCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 86 FHPNVDTKNGEICVNTLKK--DWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 86 ~HPnI~~~~G~iCl~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
|||||+ .+|+||+++|.. +|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||.
T Consensus 88 ~HPnV~-~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 88 FHPNVY-PSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCC-CCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 999999 999999999975 49999999999999999999999999999999999999999999999999999984
No 20
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-50 Score=321.27 Aligned_cols=149 Identities=35% Similarity=0.691 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHhhcCCC-------------CCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCe
Q psy15654 12 PQIIRRVSKELQDLTKTPP-------------EGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPK 78 (189)
Q Consensus 12 ~~~~kRL~~E~~~l~~~~~-------------~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~ 78 (189)
+.+.+||++|+++|+++++ .||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3578999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred eEeecccccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHH
Q psy15654 79 AFFLTKIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIH 158 (189)
Q Consensus 79 v~f~t~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~ 158 (189)
|+|+|+||||||+..+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++|
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~y 190 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETF 190 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHH
Confidence 99999999999995699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q psy15654 159 AQ 160 (189)
Q Consensus 159 a~ 160 (189)
|+
T Consensus 191 a~ 192 (193)
T 2f4z_A 191 AK 192 (193)
T ss_dssp CC
T ss_pred cc
Confidence 96
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2e-50 Score=311.79 Aligned_cols=150 Identities=28% Similarity=0.532 Sum_probs=143.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecC-----CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINE-----EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTK 84 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~-----~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 84 (189)
|+..+.+||++|+++|++++++||++.|.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 455788999999999999999999999875 389999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCeeeccCCCC--CCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 85 IFHPNVDTKNGEICVNTLKK--DWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 85 i~HPnI~~~~G~iCl~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
||||||+ .+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|.+|+++|.++||+||++||+
T Consensus 81 i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 81 FYHPNVY-PSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CccCCCC-CCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999 899999999986 79999999999999999999999999999999999999999999999999999995
No 22
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=7.6e-50 Score=317.88 Aligned_cols=148 Identities=31% Similarity=0.554 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccccc
Q psy15654 12 PQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVD 91 (189)
Q Consensus 12 ~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 91 (189)
+.+.+||++||++|++++++||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcc
Q psy15654 92 TKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQ 160 (189)
Q Consensus 92 ~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 160 (189)
.+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+||++||+
T Consensus 127 -~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 127 -SQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp -TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred -CCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 89999999999999999999999999999999999999999999999999999999999999999995
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=5.1e-50 Score=310.68 Aligned_cols=152 Identities=32% Similarity=0.593 Sum_probs=144.9
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCeEEEecC-----CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 9 NLSPQIIRRVSKELQDLTKTPPEGIHVCINE-----EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 9 ~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~-----~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
+|+..+.+||++|+++|+++++.||.+.+.. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 4678899999999999999999999998864 58999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCeeeccCCCC--CCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 84 KIFHPNVDTKNGEICVNTLKK--DWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 84 ~i~HPnI~~~~G~iCl~~l~~--~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
+||||||+ .+|.||+++|.. +|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+||++||.+
T Consensus 83 ~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 83 PLFHPNVY-PSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CcccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 99999999 899999999975 899999999999999999999999999999999999999999999999999999963
No 24
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=7.2e-50 Score=329.13 Aligned_cols=158 Identities=25% Similarity=0.582 Sum_probs=149.9
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcC---CCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEee
Q psy15654 6 NVENLSPQIIRRVSKELQDLTKT---PPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFL 82 (189)
Q Consensus 6 ~~~~~s~~~~kRL~~E~~~l~~~---~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 82 (189)
+.-+|+..+.+||++||++|+++ ++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.
T Consensus 50 s~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 50 SEFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 33568899999999999999887 468999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 83 TKIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 83 t~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
|+||||||+..+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+.+
T Consensus 130 T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~~ 209 (253)
T 3e46_A 130 TKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGAP 209 (253)
T ss_dssp SCCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCCS
T ss_pred CCCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhcccc
Confidence 99999999955999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred c
Q psy15654 163 K 163 (189)
Q Consensus 163 ~ 163 (189)
.
T Consensus 210 ~ 210 (253)
T 3e46_A 210 V 210 (253)
T ss_dssp C
T ss_pred c
Confidence 4
No 25
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2e-49 Score=308.97 Aligned_cols=156 Identities=25% Similarity=0.415 Sum_probs=145.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhcCCCCCeEEEec-CCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEe
Q psy15654 3 SMSNVENLSPQIIRRVSKELQDLTKTPPEGIHVCIN-EEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFF 81 (189)
Q Consensus 3 ~~s~~~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~-~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f 81 (189)
..+...+.++.+.+||++|+++|+++++.||++.+. ++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|
T Consensus 4 ~~~~~~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f 82 (167)
T 3fn1_B 4 TASDSTRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKC 82 (167)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEE
T ss_pred ccCCCccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEe
Confidence 445567788889999999999999999999999854 57899999998 8999999999999999999999999999999
Q ss_pred ecccccccccCCCCeeeccCCCC------CCCCcccHHHHHHHHHHhhcC-CCCCCccCHHHHHHHHHCHHHHHHHHHHH
Q psy15654 82 LTKIFHPNVDTKNGEICVNTLKK------DWNPDLGIKHILLTIKCLLIV-PNPESALNEEAGKLLLEHYDDYSRRATMM 154 (189)
Q Consensus 82 ~t~i~HPnI~~~~G~iCl~~l~~------~W~p~~~i~~iL~~i~~ll~~-p~~~~p~n~~aa~~~~~~~~~f~~~a~~~ 154 (189)
.|+||||||+ .+|+||+++|.. +|+|+++|.+||.+|++||.+ ||+++|+|.+||++|++|+++|.++||+|
T Consensus 83 ~t~i~HPnv~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~ 161 (167)
T 3fn1_B 83 LTKIWHPNIT-ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDY 161 (167)
T ss_dssp CSCCCCSSBC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCcccCCCC-CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999 999999999975 799999999999999999999 69999999999999999999999999999
Q ss_pred HHHHcc
Q psy15654 155 TEIHAQ 160 (189)
Q Consensus 155 ~~~~a~ 160 (189)
|++||+
T Consensus 162 ~~~~A~ 167 (167)
T 3fn1_B 162 IKRYAR 167 (167)
T ss_dssp HHHHCC
T ss_pred HHHhcC
Confidence 999995
No 26
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=2.2e-49 Score=305.29 Aligned_cols=148 Identities=28% Similarity=0.507 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEE-EecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccccc
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHV-CINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVD 91 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~-~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 91 (189)
.+.+||++|+++|++++++||.+ .+.++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 46799999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCCeeeccCC-CCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 92 TKNGEICVNTL-KKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 92 ~~~G~iCl~~l-~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
.+|.||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+..
T Consensus 83 -~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~~ 153 (155)
T 1wzv_A 83 -ENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVDR 153 (155)
T ss_dssp -TTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEEC
T ss_pred -CCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 7999999999 899999999999999999999999999999999999999999999999999999999854
No 27
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.2e-50 Score=313.76 Aligned_cols=150 Identities=28% Similarity=0.472 Sum_probs=143.5
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPN 89 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 89 (189)
++..+.+||++||++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+|||||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPN 106 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPN 106 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCc
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 90 VDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 90 I~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
|+ .+|+|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++| +|+++|.++|+++++++++.
T Consensus 107 V~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 107 VD-TQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp BC-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred cc-cCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 99 899999999999999999999999999999999999999999999999 99999999999999999874
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2e-49 Score=319.79 Aligned_cols=151 Identities=30% Similarity=0.624 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCC-CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCINEE-DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~~~~-d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
+.+||++|+++|++++++||++.+.++ ++++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~ 82 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 82 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcC
Confidence 569999999999999999999998776 4669999999999999999999999999999999999999999999999993
Q ss_pred CCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccccC
Q psy15654 93 KNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQASKC 164 (189)
Q Consensus 93 ~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~~~ 164 (189)
.+|.|||++|.++|+|++||.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+||++||+....
T Consensus 83 ~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~~~~ 154 (215)
T 1tte_A 83 VTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASETSN 154 (215)
T ss_dssp SSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCCCSC
T ss_pred CCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccCCCc
Confidence 399999999999999999999999999999999999999999999999999999999999999999987543
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=3.5e-48 Score=303.27 Aligned_cols=152 Identities=28% Similarity=0.516 Sum_probs=141.5
Q ss_pred CCCHHHHHHHHHHHHHhhc-C-C------CC---CeEEEe-cCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCC
Q psy15654 9 NLSPQIIRRVSKELQDLTK-T-P------PE---GIHVCI-NEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVP 76 (189)
Q Consensus 9 ~~s~~~~kRL~~E~~~l~~-~-~------~~---gi~~~~-~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~p 76 (189)
.|+..+.+||++|+++|++ . + +. |+.+.+ .++|+++|+++|.||++|||+||+|+|+|.||++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4678899999999999998 4 3 33 466777 788999999999999999999999999999999999999
Q ss_pred CeeEeec-ccccccccCCCCeeeccCCC-CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHH-CHHHHHHHHHH
Q psy15654 77 PKAFFLT-KIFHPNVDTKNGEICVNTLK-KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLE-HYDDYSRRATM 153 (189)
Q Consensus 77 P~v~f~t-~i~HPnI~~~~G~iCl~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~-~~~~f~~~a~~ 153 (189)
|+|+|.| +||||||+..+|+|||++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+ |+++|.++||+
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999 99999997579999999998 899999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHcc
Q psy15654 154 MTEIHAQ 160 (189)
Q Consensus 154 ~~~~~a~ 160 (189)
||++++.
T Consensus 162 ~~~~~~~ 168 (172)
T 2y9m_A 162 FLAERER 168 (172)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9999875
No 30
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.3e-49 Score=306.20 Aligned_cols=149 Identities=23% Similarity=0.440 Sum_probs=141.9
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccc
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFH 87 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 87 (189)
.+|+..+.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+|||
T Consensus 18 ~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~H 97 (169)
T 1yrv_A 18 GSMHGRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFH 97 (169)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCC
T ss_pred CccChHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCcc
Confidence 45777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCeeeccCCC--CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Q psy15654 88 PNVDTKNGEICVNTLK--KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEI 157 (189)
Q Consensus 88 PnI~~~~G~iCl~~l~--~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~ 157 (189)
|||+..+|.|||++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++ ++++++
T Consensus 98 PNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 98 PNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp TTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 9994399999999998 89999999999999999999999999999999999999999999999 888754
No 31
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.4e-48 Score=305.47 Aligned_cols=150 Identities=32% Similarity=0.581 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEE-ecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVC-INEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPN 89 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~-~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 89 (189)
+..+.+||++||++|+++++.||++. +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|+|||||
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 84 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPN 84 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCC
Confidence 35788999999999999999999998 67789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeeeccCCC-------------CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHH------CHHHHHHH
Q psy15654 90 VDTKNGEICVNTLK-------------KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLE------HYDDYSRR 150 (189)
Q Consensus 90 I~~~~G~iCl~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~------~~~~f~~~ 150 (189)
|+ .+|+||+++|. ++|+|+++|.+||.+|++||.+||+++|+|.+||.+|++ ++++|.++
T Consensus 85 V~-~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~ 163 (183)
T 3rz3_A 85 IY-ETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDI 163 (183)
T ss_dssp BC-TTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CC-CCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhcccccccHHHHHHH
Confidence 99 89999999996 899999999999999999999999999999999999999 78999999
Q ss_pred HHHHHHHHccc
Q psy15654 151 ATMMTEIHAQA 161 (189)
Q Consensus 151 a~~~~~~~a~~ 161 (189)
||+++++++..
T Consensus 164 v~~~v~~s~~~ 174 (183)
T 3rz3_A 164 IRKQVLGTKVD 174 (183)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 32
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5.6e-49 Score=302.14 Aligned_cols=145 Identities=27% Similarity=0.592 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccCC
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDTK 93 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~~ 93 (189)
+.+||++|++++++ .|+++.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..
T Consensus 3 a~~Rl~kEl~~l~~---~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIM---AGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHH---HTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 45899999999987 388999999999999999999999999999999999999999999999999999999999955
Q ss_pred CCeeeccCCCCCCCCcccHHHHHHH-HHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 94 NGEICVNTLKKDWNPDLGIKHILLT-IKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 94 ~G~iCl~~l~~~W~p~~~i~~iL~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|.+|+++|.++||+||++||+.
T Consensus 80 ~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred CCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999 6899999999999999999999999999999999999999985
No 33
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=6.4e-48 Score=301.77 Aligned_cols=144 Identities=33% Similarity=0.638 Sum_probs=111.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCeEEEecC-CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccc
Q psy15654 10 LSPQIIRRVSKELQDLTKTPPEGIHVCINE-EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHP 88 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~-~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 88 (189)
.+..+.+||++|+++|++++++||++.+.+ +|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|+|+||||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HP 93 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHP 93 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccC
Confidence 466788999999999999999999999865 7999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCeeeccCCC-------------CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHH-HHHHHHHHH
Q psy15654 89 NVDTKNGEICVNTLK-------------KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYD-DYSRRATMM 154 (189)
Q Consensus 89 nI~~~~G~iCl~~l~-------------~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~-~f~~~a~~~ 154 (189)
||+ .+|+||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|++ +|.++||+|
T Consensus 94 NV~-~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 94 NVD-KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp TBC-TTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------------------
T ss_pred CCC-CCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 999 89999999996 689999999999999999999999999999999999999999 999999986
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-48 Score=304.51 Aligned_cols=146 Identities=27% Similarity=0.547 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
.+.+||++|+++|+. +|+++.+. +|+++|+++|.||++|||+||+|+++|.||++||++||+|+|+|+||||||+.
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~ 100 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDE 100 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCC
Confidence 578999999999985 58888887 67899999999999999999999999999999999999999999999999993
Q ss_pred CCCeeeccCCCCCCCCcccHHHHHHH-HHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 93 KNGEICVNTLKKDWNPDLGIKHILLT-IKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 93 ~~G~iCl~~l~~~W~p~~~i~~iL~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
.+|.||+++|.++|+|+++|.+||.+ |++||.+|++++|+|.+||++|.+|+++|.++||+||++||+..
T Consensus 101 ~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~~ 171 (179)
T 2z5d_A 101 ASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE 171 (179)
T ss_dssp TTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSHH
T ss_pred CCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Confidence 39999999999999999999999999 99999999999999999999999999999999999999999853
No 35
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=4.4e-48 Score=297.75 Aligned_cols=147 Identities=25% Similarity=0.554 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEe-cCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCI-NEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~-~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
+.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~- 80 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID- 80 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC-
Confidence 568999999999999999998654 6789999999998 9999999999999999999999999999999999999999
Q ss_pred CCCeeeccCCC-CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 93 KNGEICVNTLK-KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 93 ~~G~iCl~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
.+|.||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+..
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~~ 151 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKR 151 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC----
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhcccC
Confidence 89999999996 89999999999999999999999999999999999999999999999999999999854
No 36
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.3e-47 Score=292.98 Aligned_cols=142 Identities=27% Similarity=0.578 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEE-ecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccc
Q psy15654 12 PQIIRRVSKELQDLTKTPPEGIHVC-INEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNV 90 (189)
Q Consensus 12 ~~~~kRL~~E~~~l~~~~~~gi~~~-~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI 90 (189)
+.+.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 46789999999999 477899998 7889999999988 9999999999999999999999999999999999999999
Q ss_pred cCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Q psy15654 91 DTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEI 157 (189)
Q Consensus 91 ~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~ 157 (189)
+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|++.
T Consensus 82 ~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 82 D-LEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp C-TTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred C-CCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 9 89999999999999999999999999999999999999999999999999999999999999874
No 37
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.5e-46 Score=295.88 Aligned_cols=147 Identities=26% Similarity=0.531 Sum_probs=139.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCeEEE-ecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccc
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEGIHVC-INEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIF 86 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~gi~~~-~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 86 (189)
.+.++.+.+||++|+++| ++++|+++. +.++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 21 ~~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 97 (180)
T 2nvu_C 21 SKKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVY 97 (180)
T ss_dssp CCSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred cCCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCc
Confidence 344567889999999999 478899998 7889999999998 999999999999999999999999999999999999
Q ss_pred cccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHH
Q psy15654 87 HPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIH 158 (189)
Q Consensus 87 HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~ 158 (189)
||||+ .+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|+++|.++||+|++..
T Consensus 98 HPNV~-~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 98 HPNID-LEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp BTTBC-TTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHSE
T ss_pred cCCCC-CCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHhhC
Confidence 99999 899999999999999999999999999999999999999999999999999999999999998754
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-47 Score=296.65 Aligned_cols=145 Identities=26% Similarity=0.517 Sum_probs=136.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccC
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDT 92 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~ 92 (189)
++.+||++|+++|++++. ++ +.++|+++|+++|.||++|||+||+|+|+|.||++||++||+|+|.|+||||||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 567999999999999864 44 35789999999999999999999999999999999999999999999999999995
Q ss_pred CCCeeeccCCCCCCCCcccHHHHHHHH-HHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 93 KNGEICVNTLKKDWNPDLGIKHILLTI-KCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 93 ~~G~iCl~~l~~~W~p~~~i~~iL~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
.+|.|||++|.++|+|+++|.+||.+| ++||.+|++++|+|.+||.+|.+|+++|.++||+||++||+.
T Consensus 88 ~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 88 RSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp TTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred cCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 599999999999999999999999997 799999999999999999999999999999999999999986
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=3.7e-46 Score=325.48 Aligned_cols=150 Identities=34% Similarity=0.634 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccccccccc
Q psy15654 12 PQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVD 91 (189)
Q Consensus 12 ~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~ 91 (189)
+.|.+||++|+++|++++++|+++.|.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHcccc
Q psy15654 92 TKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQAS 162 (189)
Q Consensus 92 ~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~~ 162 (189)
.+|.||+++|.++|+|++||.+||.+|++||.+|++++|+|.+||++|.+|+++|.++||+||++||+..
T Consensus 82 -~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~~ 151 (399)
T 4ddg_A 82 -SNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMGG 151 (399)
T ss_dssp -TTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSCT
T ss_pred -CCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhccc
Confidence 8999999999999999999999999999999999999999999999999999999999999999999863
No 40
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=2.8e-45 Score=290.83 Aligned_cols=147 Identities=29% Similarity=0.570 Sum_probs=138.8
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCCCeEEE----ecCCCcc---eEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEe
Q psy15654 9 NLSPQIIRRVSKELQDLTKTPPEGIHVC----INEEDIT---DVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFF 81 (189)
Q Consensus 9 ~~s~~~~kRL~~E~~~l~~~~~~gi~~~----~~~~d~~---~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f 81 (189)
+.++.+.+||++||++|+ +++|+++. +.++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 445678899999999998 77899998 7889999 9999997 788999999999999999999999999999
Q ss_pred ecccccccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHc
Q psy15654 82 LTKIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRRATMMTEIHA 159 (189)
Q Consensus 82 ~t~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a 159 (189)
.|+||||||+ .+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|.+|+++|.++||+|++...
T Consensus 102 ~t~i~HPnV~-~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~~ 178 (190)
T 3o2u_A 102 LKKIFHPNID-LKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGGS 178 (190)
T ss_dssp CSCCCCTTBC-TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTCE
T ss_pred ecCcccCCCC-CCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhcC
Confidence 9999999999 8999999999999999999999999999999999999999999999999999999999999995443
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=8.4e-45 Score=282.89 Aligned_cols=142 Identities=20% Similarity=0.421 Sum_probs=132.9
Q ss_pred CCHHHHHHHHHHHHHhhcCC------------CCCeEEEecCCCcceEEEEEeCCCCCCcC--CCEEEEEEecCCCCCCC
Q psy15654 10 LSPQIIRRVSKELQDLTKTP------------PEGIHVCINEEDITDVQAIIDGPAGTPYS--NGYFKVKLLLSKNFPSV 75 (189)
Q Consensus 10 ~s~~~~kRL~~E~~~l~~~~------------~~gi~~~~~~~d~~~w~~~i~Gp~~tpye--gg~f~~~i~fp~~YP~~ 75 (189)
||..+.+||++|+++|++++ +.|+.+.+.++|+++|+++|.||++|||+ ||+|+++|.||++||++
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~ 84 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHE 84 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTS
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCC
Confidence 45567799999999999876 77999999999999999999999999999 99999999999999999
Q ss_pred CCeeEeecccccccccCCCCeeeccCCCCCCCCcccHHHHHH-HHHHhhcC--CCCCCccCHHHHHHHHHCHHHHHHHHH
Q psy15654 76 PPKAFFLTKIFHPNVDTKNGEICVNTLKKDWNPDLGIKHILL-TIKCLLIV--PNPESALNEEAGKLLLEHYDDYSRRAT 152 (189)
Q Consensus 76 pP~v~f~t~i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~-~i~~ll~~--p~~~~p~n~~aa~~~~~~~~~f~~~a~ 152 (189)
||+|+|.|+||||||+ .+|.||+++|.++|+|+++|.++|. .|++|+.+ |++++|+|.+||++|++|+++|.++||
T Consensus 85 pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vr 163 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVR 163 (167)
T ss_dssp CCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHT
T ss_pred CCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999754 67777774 899999999999999999999999998
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=296.72 Aligned_cols=167 Identities=25% Similarity=0.468 Sum_probs=150.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCC----eEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEG----IHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~g----i~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
..++..+.+||++|+++|++++++| +.+.+.++|++.|+++|.||++|||+||+|+|+|.||++||++||+|+|.|
T Consensus 71 ~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T 150 (323)
T 3ceg_A 71 DANSAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLET 150 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEec
Confidence 3588999999999999999987764 567788999999999999999999999999999999999999999999999
Q ss_pred c-----cccccccCCCCeeeccCCC-------CCCCCcc-cHHHHHHHHHHhhc--CCCCCCccCHHH--HHHHHHCHHH
Q psy15654 84 K-----IFHPNVDTKNGEICVNTLK-------KDWNPDL-GIKHILLTIKCLLI--VPNPESALNEEA--GKLLLEHYDD 146 (189)
Q Consensus 84 ~-----i~HPnI~~~~G~iCl~~l~-------~~W~p~~-~i~~iL~~i~~ll~--~p~~~~p~n~~a--a~~~~~~~~~ 146 (189)
+ ||||||+ .+|+|||++|. ++|+|++ +|.+||.+|++||. +|++++|+|.++ +.++.+++++
T Consensus 151 ~~g~~~ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~ 229 (323)
T 3ceg_A 151 TGGHSVRFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPSGTQSSRE 229 (323)
T ss_dssp STTTTCCCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHHHHHHHHH
T ss_pred cCCCcccccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhhhhhhHHH
Confidence 9 9999999 99999999997 6999999 89999999999996 777799999987 6789999999
Q ss_pred HHHHHHHHHHHHcccc--cCCCCCCCccccc
Q psy15654 147 YSRRATMMTEIHAQAS--KCSKLGYKSSESR 175 (189)
Q Consensus 147 f~~~a~~~~~~~a~~~--~~~~~~~~~~~~~ 175 (189)
|.++|++||++||+.. ..+..+|......
T Consensus 230 Y~~~vr~~t~k~A~~~~l~~Pp~~f~~~i~~ 260 (323)
T 3ceg_A 230 YDGNIRQATVKWAMLEQIRNPSPCFKEVIHK 260 (323)
T ss_dssp HHHHHHHHHHHHTTHHHHHSCCTTTHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHhCCCcccHHHHHH
Confidence 9999999999999873 3555677655443
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.3e-42 Score=267.62 Aligned_cols=134 Identities=22% Similarity=0.386 Sum_probs=122.3
Q ss_pred CCCCHHHHHHHHHHHHHhhcC-CCCCeEEEecC-C--CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 8 ENLSPQIIRRVSKELQDLTKT-PPEGIHVCINE-E--DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~-~~~gi~~~~~~-~--d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
...+..+.+||++|+++++++ ++.|+++.+.. + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|
T Consensus 16 ~~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 16 FQGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp CSSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CcccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 346667889999999999998 78899998853 3 5999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCee---eccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHC
Q psy15654 84 KIFHPNVDTKNGEI---CVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEH 143 (189)
Q Consensus 84 ~i~HPnI~~~~G~i---Cl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~ 143 (189)
+||||||+ .+|+| ||++|. +|+|+++|.+||.+|++||.+|++++|+|.+||.+|.+|
T Consensus 96 ~i~HPNV~-~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 96 KIEMSCVD-NCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCCCTTBC-TTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred ccccCCCc-cCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 99999999 88999 899886 599999999999999999999999999999999988764
No 44
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-41 Score=253.24 Aligned_cols=116 Identities=29% Similarity=0.542 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccc-cccccc
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKI-FHPNVD 91 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnI~ 91 (189)
.+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 85 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVY 85 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 4679999999999999999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred CCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCCC
Q psy15654 92 TKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNPE 129 (189)
Q Consensus 92 ~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~ 129 (189)
.+|+||+++|.++|+|++||.+||.+|++||.+|+..
T Consensus 86 -~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 86 -SNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp -TTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC-----
T ss_pred -CCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 8999999999999999999999999999999999764
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=1.4e-41 Score=262.56 Aligned_cols=130 Identities=25% Similarity=0.400 Sum_probs=119.7
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCC-eEEEe-cCCC--cceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEG-IHVCI-NEED--ITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~g-i~~~~-~~~d--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
..+...+.+||++|+++|++++++| +.+.+ .++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|+|
T Consensus 20 ~~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T 99 (160)
T 2a4d_A 20 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVT 99 (160)
T ss_dssp -CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred CeeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEec
Confidence 3456788999999999999998888 77776 4454 899999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCeeeccCCC--CCCCCcccHHHHHHHHHHhhc-CCCCCCccCHHHH
Q psy15654 84 KIFHPNVDTKNGEICVNTLK--KDWNPDLGIKHILLTIKCLLI-VPNPESALNEEAG 137 (189)
Q Consensus 84 ~i~HPnI~~~~G~iCl~~l~--~~W~p~~~i~~iL~~i~~ll~-~p~~~~p~n~~aa 137 (189)
+||||||+..+|+||+++|. ++|+|+++|++||.+|++||. +||+++|+|.|||
T Consensus 100 ~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 100 KINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 99999998669999999998 899999999999999999995 7999999999987
No 46
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7e-41 Score=252.68 Aligned_cols=115 Identities=31% Similarity=0.566 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccc-cccccc
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKI-FHPNVD 91 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i-~HPnI~ 91 (189)
.+.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999997 999999
Q ss_pred CCCCeeeccCCCCCCCCcccHHHHHHHHHHhhcCCCC
Q psy15654 92 TKNGEICVNTLKKDWNPDLGIKHILLTIKCLLIVPNP 128 (189)
Q Consensus 92 ~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~ 128 (189)
.+|+||+++|.++|+|+++|.+||.+|++||.+|+.
T Consensus 100 -~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 100 -SNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp -TTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred -CCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 899999999999999999999999999999999863
No 47
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=9.2e-42 Score=258.10 Aligned_cols=127 Identities=24% Similarity=0.436 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHhhcC-CCCCeEEEecC-C--CcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccc
Q psy15654 13 QIIRRVSKELQDLTKT-PPEGIHVCINE-E--DITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHP 88 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~-~~~gi~~~~~~-~--d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 88 (189)
.+.+||++|+++++++ ++.|+++.+.. + |+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 85 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLP 85 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccC
Confidence 4568999999999998 78899998853 3 489999999999999999999999999999999999999999999999
Q ss_pred cccCCCCee--eccCCCCCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHH
Q psy15654 89 NVDTKNGEI--CVNTLKKDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLL 140 (189)
Q Consensus 89 nI~~~~G~i--Cl~~l~~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~ 140 (189)
||+..+|+| ||++|. +|+|+++|.+||.+|++||.+|++++|+|.+||.+|
T Consensus 86 nv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 86 CVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp TBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 999445999 999885 899999999999999999999999999999987643
No 48
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=259.72 Aligned_cols=127 Identities=25% Similarity=0.404 Sum_probs=117.4
Q ss_pred CHHHHHHHHHHHHHhhcCCCCC-eEEEe-cCCC--cceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccc
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEG-IHVCI-NEED--ITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIF 86 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~g-i~~~~-~~~d--~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 86 (189)
...+.+||++|+++|++++++| +.+.+ +++| +++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 3457899999999999998888 66776 4554 899999999999999999999999999999999999999999999
Q ss_pred cccccCCCCeeeccCCC--CCCCCcccHHHHHHHHHHhhc-CCCCCCccCHHHH
Q psy15654 87 HPNVDTKNGEICVNTLK--KDWNPDLGIKHILLTIKCLLI-VPNPESALNEEAG 137 (189)
Q Consensus 87 HPnI~~~~G~iCl~~l~--~~W~p~~~i~~iL~~i~~ll~-~p~~~~p~n~~aa 137 (189)
||||+..+|+||+++|. ++|+|++||.+||.+|++||. .||+++|+|.|||
T Consensus 113 HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred cCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 99998679999999998 899999999999999999997 5999999999987
No 49
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.5e-40 Score=248.09 Aligned_cols=115 Identities=30% Similarity=0.595 Sum_probs=107.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCCCeEEE--ecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeeccc
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTPPEGIHVC--INEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKI 85 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~~~gi~~~--~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 85 (189)
..|+..+ +||++|++++++++++||++. +.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|++
T Consensus 18 ~~Ms~~~-~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 96 (136)
T 2a7l_A 18 GSMASMQ-KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGEN 96 (136)
T ss_dssp GGGTTSC-HHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSC
T ss_pred hhccHHH-HHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 3454433 999999999999999999965 7889999999999999999999999999999999999999999999999
Q ss_pred c--cccccCCCCeeeccCCCCCCCCcccHHHHHHHHHHhhc
Q psy15654 86 F--HPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIKCLLI 124 (189)
Q Consensus 86 ~--HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~~ll~ 124 (189)
| ||||+ .+|+||+++|.++|+|+++|.+||.+|++||.
T Consensus 97 ~~~HPNV~-~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 97 IPVHPHVY-SNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCCBTTBC-TTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred cCCCccCC-CCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 9 99999 89999999999999999999999999999983
No 50
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-39 Score=256.44 Aligned_cols=127 Identities=24% Similarity=0.501 Sum_probs=105.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeE
Q psy15654 1 MNSMSNVENLSPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAF 80 (189)
Q Consensus 1 ~~~~s~~~~~s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~ 80 (189)
|++.++ ++.+..+.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+
T Consensus 3 mss~~~-~~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~ 81 (187)
T 2f4w_A 3 MSSTSS-KRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIY 81 (187)
T ss_dssp ------------CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEE
T ss_pred CCccCC-CCCccHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccc
Confidence 666666 4777889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccCCCCeeeccCC---CCCCCCcccHHHHHHHHHHhhcCCCCCCc
Q psy15654 81 FLTKIFHPNVDTKNGEICVNTL---KKDWNPDLGIKHILLTIKCLLIVPNPESA 131 (189)
Q Consensus 81 f~t~i~HPnI~~~~G~iCl~~l---~~~W~p~~~i~~iL~~i~~ll~~p~~~~p 131 (189)
|.|+ ||||+ .+|+|||++| .++|+|+++|.+||.+|++||.+|+++..
T Consensus 82 f~T~--~~~~~-~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 82 MITP--NGRFK-CNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp ECSC--CSSBC-TTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred ccCC--Cceec-cCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 9999 99999 8999999999 68999999999999999999999998643
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.1e-39 Score=256.27 Aligned_cols=144 Identities=17% Similarity=0.297 Sum_probs=127.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcCC---CCCeEEEecCCCcceEEEEEeCC-CCCCcCC-----------CEEEEEEecCCCC
Q psy15654 8 ENLSPQIIRRVSKELQDLTKTP---PEGIHVCINEEDITDVQAIIDGP-AGTPYSN-----------GYFKVKLLLSKNF 72 (189)
Q Consensus 8 ~~~s~~~~kRL~~E~~~l~~~~---~~gi~~~~~~~d~~~w~~~i~Gp-~~tpyeg-----------g~f~~~i~fp~~Y 72 (189)
..++..+.+||++||++|++++ +.|+++.+.++|+++|+++|.|| ++|||+| |.|.|+|.||++|
T Consensus 22 ~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~Y 101 (186)
T 1zuo_A 22 VSGSVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNF 101 (186)
T ss_dssp --CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCC
Confidence 4578899999999999999988 68899999999999999999998 9999998 8999999999999
Q ss_pred CCCCCeeEeecccccc-cccCCCCeeeccCCC-CCCCCcccHHHHHHHHHHhhcCCCCCCccCHHHHHHHHHCHHHHHHH
Q psy15654 73 PSVPPKAFFLTKIFHP-NVDTKNGEICVNTLK-KDWNPDLGIKHILLTIKCLLIVPNPESALNEEAGKLLLEHYDDYSRR 150 (189)
Q Consensus 73 P~~pP~v~f~t~i~HP-nI~~~~G~iCl~~l~-~~W~p~~~i~~iL~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~ 150 (189)
|++||+|+|.|++||| ||+ .+|.|||++|. ++|+|+++|.+||.+|++||.+|+... .|..++.+|.++
T Consensus 102 P~~PP~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~ 172 (186)
T 1zuo_A 102 PFDPPFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLA 172 (186)
T ss_dssp TSSCCEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHH
T ss_pred CCCCCeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHH
Confidence 9999999999999999 699 99999999997 799999999999999999999986532 234456777777
Q ss_pred HHHHHHHHcc
Q psy15654 151 ATMMTEIHAQ 160 (189)
Q Consensus 151 a~~~~~~~a~ 160 (189)
+++.+.+.+.
T Consensus 173 ~~~~~~~~~~ 182 (186)
T 1zuo_A 173 RAQQSYNSIV 182 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776653
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.94 E-value=4.9e-28 Score=185.36 Aligned_cols=100 Identities=19% Similarity=0.322 Sum_probs=91.7
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCC----------EEEEEEecCCCCCCCCCeeE
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNG----------YFKVKLLLSKNFPSVPPKAF 80 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~ 80 (189)
.....+||++||+.|++ ++.+..+|+..|.+++.||.+|+|+|| .|.++|.||++||++||+|+
T Consensus 30 ~~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~ 103 (172)
T 2z6o_A 30 RELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIA 103 (172)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred cHHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeee
Confidence 36679999999999998 466778899999999999999999999 99999999999999999999
Q ss_pred eecc-cccccccCCCCeeeccCC-CC---CCCCcccHHHHHH
Q psy15654 81 FLTK-IFHPNVDTKNGEICVNTL-KK---DWNPDLGIKHILL 117 (189)
Q Consensus 81 f~t~-i~HPnI~~~~G~iCl~~l-~~---~W~p~~~i~~iL~ 117 (189)
|.++ +|||||+ .+|+|||++| .. .|+|.++|.+||.
T Consensus 104 F~~~~~~hpnmY-~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 104 VPELDGKTAKMY-RGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CGGGTTTCSSBC-TTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred eCCCCCCCCCCC-CCCcEechhhccccccccCCccCHHHHHh
Confidence 9998 9999999 8999999999 43 5569999999983
No 53
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.82 E-value=4.9e-20 Score=141.87 Aligned_cols=113 Identities=18% Similarity=0.266 Sum_probs=90.2
Q ss_pred HHHHHHHHHhhcCCC---CCeEEEecCCCcceEEEEEeCCCCCCcCCCE---EEEEEecCCCCCCCCCeeEeec------
Q psy15654 16 RRVSKELQDLTKTPP---EGIHVCINEEDITDVQAIIDGPAGTPYSNGY---FKVKLLLSKNFPSVPPKAFFLT------ 83 (189)
Q Consensus 16 kRL~~E~~~l~~~~~---~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~---f~~~i~fp~~YP~~pP~v~f~t------ 83 (189)
+|..+|...+.+.-+ +...+...+|....+-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 456667766644322 1222334556666777777777779999999 8999999999999999998855
Q ss_pred -c---cc-cccccCCCCeeeccCCCCCCCC-cccHHHHHHHHHHhhcCCCCCC
Q psy15654 84 -K---IF-HPNVDTKNGEICVNTLKKDWNP-DLGIKHILLTIKCLLIVPNPES 130 (189)
Q Consensus 84 -~---i~-HPnI~~~~G~iCl~~l~~~W~p-~~~i~~iL~~i~~ll~~p~~~~ 130 (189)
+ |+ ||||| .+|+||+++| ++|+| +.+|.++|.+|+++|.+|+++.
T Consensus 111 ~~~~~I~~hpnVD-~~G~I~lpyL-~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 111 TISSSLPIQEYID-SNGWIALPIL-HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TSCTTSTHHHHBC-TTSBBCCGGG-GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred ccccccCCCCCCC-CCCcEeCccc-ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 1 77 99999 9999999999 57999 5799999999999999999875
No 54
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.76 E-value=8.7e-20 Score=136.87 Aligned_cols=90 Identities=19% Similarity=0.294 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCC----------EEEEEEecCCCCCCCCCeeE
Q psy15654 11 SPQIIRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNG----------YFKVKLLLSKNFPSVPPKAF 80 (189)
Q Consensus 11 s~~~~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg----------~f~~~i~fp~~YP~~pP~v~ 80 (189)
...-..||.+||..|-+ +++.+..+-..|...+.||.+|+|.|+ .|.+++.||.+||.+||.|+
T Consensus 32 ~~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~ 105 (168)
T 3kpa_A 32 GDKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIA 105 (168)
T ss_dssp THHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCB
T ss_pred HHHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEee
Confidence 45678999999999865 455555667899999999999999999 99999999999999999999
Q ss_pred eecc-cccccccCCCCeeeccCCCCCCCCcc
Q psy15654 81 FLTK-IFHPNVDTKNGEICVNTLKKDWNPDL 110 (189)
Q Consensus 81 f~t~-i~HPnI~~~~G~iCl~~l~~~W~p~~ 110 (189)
|.+. ++|||++ .+|+|||+++ |+|.+
T Consensus 106 Fp~ldgkt~kmY-r~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 106 LPELEGKTVKMY-RGGKICMTTH---FFPLW 132 (168)
T ss_dssp CGGGTTTCSSEE-TTTEECCCTT---HHHHH
T ss_pred cccccCcCcccc-CCCcEEeccc---cchhh
Confidence 9995 8999999 9999999986 66553
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.52 E-value=1.9e-14 Score=108.88 Aligned_cols=78 Identities=21% Similarity=0.462 Sum_probs=70.0
Q ss_pred CCcceEEEEEeCCCCCCcCCCEEEE--EEecCCCCCCCCCeeEeecc------cccccccCCCCeeeccCCCCCCCC-cc
Q psy15654 40 EDITDVQAIIDGPAGTPYSNGYFKV--KLLLSKNFPSVPPKAFFLTK------IFHPNVDTKNGEICVNTLKKDWNP-DL 110 (189)
Q Consensus 40 ~d~~~w~~~i~Gp~~tpyegg~f~~--~i~fp~~YP~~pP~v~f~t~------i~HPnI~~~~G~iCl~~l~~~W~p-~~ 110 (189)
.+++.|.++|. .+|+|+.|.+ .|.||.+||++||.| |.++ ..||||| .+|+||++.|.+ |++ ..
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd-~~G~i~lpyL~~-W~~~~s 123 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVD-ANGKIYLPYLHE-WKHPQS 123 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBC-TTCBBCCHHHHT-CCTTTC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCC-CCCCEecccccc-cCCCCC
Confidence 57889999997 6899999985 999999999999999 7766 5899999 999999999954 998 67
Q ss_pred cHHHHHHHHHHhhc
Q psy15654 111 GIKHILLTIKCLLI 124 (189)
Q Consensus 111 ~i~~iL~~i~~ll~ 124 (189)
+|.++|..++++|.
T Consensus 124 nL~~ll~~l~~~F~ 137 (146)
T 3obq_A 124 DLLGLIQVMIVVFG 137 (146)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999986
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.00 E-value=0.033 Score=39.97 Aligned_cols=67 Identities=18% Similarity=0.233 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 15 IRRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 15 ~kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
..+...|+..|+.--+..+.+ ..+....+.+.|....+..-+.-.+.+.|.||++||.+||.+.+.+
T Consensus 12 ~e~q~~EleaL~sIy~d~~~~--~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 12 GEEQRNELEALESIYPDSFTV--LSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHCSSSEEE--CCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHHccCceEE--ccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 356678888887654444443 2233456666665322222234478999999999999999987654
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.11 Score=37.75 Aligned_cols=69 Identities=9% Similarity=0.104 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEecC-------CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 13 QIIRRVSKELQDLTKTPPEGIHVCINE-------EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 13 ~~~kRL~~E~~~l~~~~~~gi~~~~~~-------~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
....+...|+..|+.--+..+.+. .. +....+.+.|.+..+ .-..-.+.+.|.+|++||..||.|.+.+
T Consensus 10 ~~~e~q~~EleaL~SIY~d~~~~~-~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 10 QYYEIQCNELEAIRSIYMDDFTDL-TKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHHHTTSSSSEECC-STTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred chHHHHHHHHHHHHHHChhhheec-ccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 344566788888876544444321 11 124567777764322 1123478899999999999999998755
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.47 E-value=0.088 Score=37.68 Aligned_cols=68 Identities=10% Similarity=0.138 Sum_probs=42.5
Q ss_pred HHHHHHHHhhcCCCCCeEEEecC--CCcceEEEEEeCCCCCCc--CCCEEEEEEecCCCCCCCCCeeEeecc
Q psy15654 17 RVSKELQDLTKTPPEGIHVCINE--EDITDVQAIIDGPAGTPY--SNGYFKVKLLLSKNFPSVPPKAFFLTK 84 (189)
Q Consensus 17 RL~~E~~~l~~~~~~gi~~~~~~--~d~~~w~~~i~Gp~~tpy--egg~f~~~i~fp~~YP~~pP~v~f~t~ 84 (189)
+...|+..|+.--+..+.+.-.. .+...+.+.|..+.+..- ..-.+.+.|.||++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 56788888876555555443211 134445555542222111 124788999999999999999987763
No 59
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.14 E-value=0.25 Score=36.73 Aligned_cols=75 Identities=11% Similarity=0.114 Sum_probs=45.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhcCCC--CCeEEEec-------------CCC-c--ceEEEEEeCCCCCCcCCCEEEEEE
Q psy15654 5 SNVENLSPQIIRRVSKELQDLTKTPP--EGIHVCIN-------------EED-I--TDVQAIIDGPAGTPYSNGYFKVKL 66 (189)
Q Consensus 5 s~~~~~s~~~~kRL~~E~~~l~~~~~--~gi~~~~~-------------~~d-~--~~w~~~i~Gp~~tpyegg~f~~~i 66 (189)
+-|+.+......+-..|+..|..--+ .-+.+.-. ..+ . ..+.+.|.-. + + ...+.+.|
T Consensus 6 ~~~~~~~~~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~-~-~--~~~i~L~v 81 (154)
T 2daw_A 6 SGMSASVKESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIE-E-P--KVKIDLQV 81 (154)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEET-T-T--TEEEEEEE
T ss_pred CcchhhhhhhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecC-C-C--CceEEEEE
Confidence 34555555666777888888876544 44544210 001 1 2444433311 1 1 12799999
Q ss_pred ecCCCCCCCCCeeEeec
Q psy15654 67 LLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 67 ~fp~~YP~~pP~v~f~t 83 (189)
.+|.+||..+|.|...+
T Consensus 82 ~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 82 TMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EECSSTTSSCCEEEEEC
T ss_pred EcCCCCCCCCCcEEEEe
Confidence 99999999999997654
No 60
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=94.15 E-value=0.46 Score=36.69 Aligned_cols=83 Identities=13% Similarity=0.237 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccccccccCCCC
Q psy15654 16 RRVSKELQDLTKTPPEGIHVCINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIFHPNVDTKNG 95 (189)
Q Consensus 16 kRL~~E~~~l~~~~~~gi~~~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnI~~~~G 95 (189)
.+|.+|+..+-=+ .+.-.++++....+.+..- .|....++|.++.+||.++|.+...-|+ ..+
T Consensus 4 ~~li~Ei~~iGW~-----~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP~-~~~------ 66 (186)
T 3zqs_A 4 SSLIEEIGTLGWD-----KLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFPV-PFC------ 66 (186)
T ss_dssp CSHHHHHHHHCGG-----GEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCSS-CCC------
T ss_pred HHHHHHHHHhCCc-----eeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCCC-Ccc------
Confidence 3678888887211 1222346788888888743 4778899999999999999987654443 111
Q ss_pred eeeccCCCCCCCCcccHHHHHHHHHHhh
Q psy15654 96 EICVNTLKKDWNPDLGIKHILLTIKCLL 123 (189)
Q Consensus 96 ~iCl~~l~~~W~p~~~i~~iL~~i~~ll 123 (189)
-.|.|..++.+++...+..+
T Consensus 67 --------~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 67 --------ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp --------CCCCTTCCHHHHHHHHHHHH
T ss_pred --------cccCCCccHHHHHHHHHHHH
Confidence 37999999998888777766
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.43 E-value=0.34 Score=34.89 Aligned_cols=69 Identities=14% Similarity=0.217 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCC-----CcceEEEEEeCCCC-C-CcCCCEEEEEEecCCCCCCCCCeeEeec
Q psy15654 14 IIRRVSKELQDLTKTPPEGIHVCINEE-----DITDVQAIIDGPAG-T-PYSNGYFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi~~~~~~~-----d~~~w~~~i~Gp~~-t-pyegg~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
...+...|+..|+.--+..+.+.-... ......+.|. +.+ + .-..-.+.+.|.||++||..+|.|.+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 345667888888765444444321111 1345556665 221 1 0012468999999999999999998743
No 62
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.14 E-value=0.26 Score=35.22 Aligned_cols=65 Identities=20% Similarity=0.103 Sum_probs=38.9
Q ss_pred HHHHHHHHhhcCCCC--CeEE-EecCCCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEee
Q psy15654 17 RVSKELQDLTKTPPE--GIHV-CINEEDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFL 82 (189)
Q Consensus 17 RL~~E~~~l~~~~~~--gi~~-~~~~~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 82 (189)
+...|+..|+.--+. .+.+ .....+...+.+.|.... ..-..-.+.+.|.+|.+||..+|.|...
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~-~~~~~~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEG-FMDADIPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCT-TTTCCCEEEEEEEECSSTTSSCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCC-CCCCCeEEEEEEECCCCCCCCCCeEEEE
Confidence 356777777653222 3332 111123457777776322 1111247899999999999999998654
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.41 E-value=0.34 Score=35.77 Aligned_cols=23 Identities=22% Similarity=0.459 Sum_probs=20.3
Q ss_pred EEEEEEecCCCCCCCCCeeEeec
Q psy15654 61 YFKVKLLLSKNFPSVPPKAFFLT 83 (189)
Q Consensus 61 ~f~~~i~fp~~YP~~pP~v~f~t 83 (189)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 68899999999999999997654
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=86.56 E-value=0.13 Score=36.34 Aligned_cols=35 Identities=11% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 127 NPESALNEEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 127 ~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
....|.+.+.|++|+++++.|..+|+.|+.-+|.+
T Consensus 22 ~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~~ 56 (108)
T 2cwb_A 22 TTTEAVDAATAEKVFKQYANDNGVDGEWTYDDATK 56 (108)
T ss_dssp -----------------------------------
T ss_pred ccCCchhHHHHHHHHhchhccccccccccccCcCC
Confidence 34578999999999999999999999999777754
No 65
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=67.46 E-value=4 Score=20.45 Aligned_cols=20 Identities=30% Similarity=0.564 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHhhcCCCCCe
Q psy15654 14 IIRRVSKELQDLTKTPPEGI 33 (189)
Q Consensus 14 ~~kRL~~E~~~l~~~~~~gi 33 (189)
-+.||.-|+...+.+||+|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 46799999999999999874
No 66
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=29.24 E-value=51 Score=25.11 Aligned_cols=56 Identities=18% Similarity=0.404 Sum_probs=36.2
Q ss_pred CCEEEEEEecCCCCCCCCCeeEeecc--cccccccCCCCeeeccCCCCCCCCcccHHHHHHHHH
Q psy15654 59 NGYFKVKLLLSKNFPSVPPKAFFLTK--IFHPNVDTKNGEICVNTLKKDWNPDLGIKHILLTIK 120 (189)
Q Consensus 59 gg~f~~~i~fp~~YP~~pP~v~f~t~--i~HPnI~~~~G~iCl~~l~~~W~p~~~i~~iL~~i~ 120 (189)
|....+.|++.+..|...|.++|+-+ .-+|.-. .+.-+ -..|.|..++.+-|..|.
T Consensus 123 g~~vsl~i~vdP~~P~~lPe~~FlG~~~~v~~lr~----~~~~n--l~~Wd~~~~i~~NL~~il 180 (186)
T 3zqs_A 123 GNNVSINIEVDPRHPTMLPECFFLGADHVVKPLGI----KLSRN--IHLWDPENSVLQNLKDVL 180 (186)
T ss_dssp ETTEEEEEECCTTSTTSCCEEEEEECHHHHHHHHH----HHHHH--GGGCCTTSCHHHHHHHHH
T ss_pred CCCcEEEEEECCCCCCcCCceEEECChHHHHHHHH----HHhhh--HhhcCCCCCHHHHHHHHH
Confidence 34467889999999999999999865 2222111 00000 148999998876666554
No 67
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=28.70 E-value=1.1e+02 Score=27.08 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=23.5
Q ss_pred HHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 135 EAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 135 ~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
|+..+..++++.|.+.|++...+|..+
T Consensus 279 e~~~l~~~dp~~~~~~~~~Sm~rhv~a 305 (552)
T 2fkn_A 279 EADRLRQDTPELYVRLAKQSMKKHVEA 305 (552)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 777788899999999999998888765
No 68
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=28.23 E-value=1.1e+02 Score=26.99 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=24.0
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 134 EEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 134 ~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
.|+..+..++++.|.+.|++...+|..+
T Consensus 277 ee~~~l~~~dp~~~~~~~~~Sm~rhv~a 304 (551)
T 1x87_A 277 DEAAELRARDPKQYIARAKQSIAAHVRA 304 (551)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3777888899999999999998888765
No 69
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=27.85 E-value=1.2e+02 Score=26.94 Aligned_cols=28 Identities=18% Similarity=0.098 Sum_probs=23.9
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHccc
Q psy15654 134 EEAGKLLLEHYDDYSRRATMMTEIHAQA 161 (189)
Q Consensus 134 ~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 161 (189)
.|+..+..++++.|.+.|++...+|..+
T Consensus 282 ee~~~l~~~dp~~~~~~~~~Sm~rhv~A 309 (557)
T 1uwk_A 282 EQYRDRAQTEPAAVVKAAKQSMAVHVQA 309 (557)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3777888899999999999998888765
No 70
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=25.42 E-value=57 Score=25.18 Aligned_cols=25 Identities=12% Similarity=0.426 Sum_probs=21.7
Q ss_pred CCCEEEEEEecCCCCCC-----CCCeeEee
Q psy15654 58 SNGYFKVKLLLSKNFPS-----VPPKAFFL 82 (189)
Q Consensus 58 egg~f~~~i~fp~~YP~-----~pP~v~f~ 82 (189)
+.|.|.|+-.+|--||. .||.|.|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 78888775
No 71
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=24.18 E-value=1.7e+02 Score=22.00 Aligned_cols=45 Identities=22% Similarity=0.241 Sum_probs=31.4
Q ss_pred CCcceEEEEEeCCCCCCcCCCEEEEEEecCCCCCCCCCeeEeecccc
Q psy15654 40 EDITDVQAIIDGPAGTPYSNGYFKVKLLLSKNFPSVPPKAFFLTKIF 86 (189)
Q Consensus 40 ~d~~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~ 86 (189)
+...+|.|.+.|+.+.--..-+=++...+.+.||. |...+..+-|
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPF 74 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPF 74 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCC
Confidence 35679999999987654434456788888899875 6666655543
Done!