Query psy15658
Match_columns 235
No_of_seqs 199 out of 1302
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 18:17:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15658.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15658hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bl2_A V-type sodium ATP synth 100.0 3.6E-36 1.2E-40 251.7 17.0 154 21-185 2-155 (156)
2 2xqu_A C15_RING, ATP synthase 99.7 1.5E-16 5.1E-21 120.1 10.3 74 115-188 4-81 (82)
3 2wgm_A ATP synthase subunit C, 99.6 1.4E-15 4.7E-20 116.6 10.3 76 114-190 7-86 (89)
4 1wu0_A ATP synthase C chain; A 99.6 2.5E-15 8.6E-20 110.9 7.9 66 119-184 2-71 (72)
5 2x2v_A ATP synthase subunit C; 99.6 7.1E-15 2.4E-19 107.7 9.3 62 122-183 3-68 (69)
6 1a91_A F1FO ATPase subunit C; 99.6 1.9E-14 6.6E-19 108.0 9.8 66 120-185 8-77 (79)
7 1wu0_A ATP synthase C chain; A 99.5 4.8E-14 1.6E-18 104.0 5.9 65 33-97 3-71 (72)
8 2x2v_A ATP synthase subunit C; 99.5 5.2E-14 1.8E-18 103.0 5.5 62 35-96 3-68 (69)
9 2xqu_A C15_RING, ATP synthase 99.4 1.1E-13 3.6E-18 104.5 6.4 68 32-99 8-79 (82)
10 2xnd_J ATP synthase lipid-bind 99.4 2.6E-14 8.8E-19 105.5 1.9 64 119-183 4-71 (72)
11 1a91_A F1FO ATPase subunit C; 99.4 6.1E-13 2.1E-17 99.8 6.8 66 33-98 8-77 (79)
12 2wgm_A ATP synthase subunit C, 99.4 7.7E-13 2.6E-17 101.2 6.5 67 32-99 12-82 (89)
13 2bl2_A V-type sodium ATP synth 99.4 1.9E-12 6.4E-17 108.2 9.0 70 118-187 12-81 (156)
14 4f4s_A ATP synthase subunit 9, 99.3 4.2E-12 1.5E-16 94.7 8.7 69 116-185 3-75 (76)
15 2xnd_J ATP synthase lipid-bind 99.3 8.7E-13 3E-17 97.3 2.1 63 33-96 5-71 (72)
16 4f4s_A ATP synthase subunit 9, 99.0 2.6E-10 8.8E-15 85.1 4.9 65 32-97 6-74 (76)
No 1
>2bl2_A V-type sodium ATP synthase subunit K; V-type ATPase, K-ring, membrane rotor, sodium transporter, H ION transport, hydrolase, transmembrane; HET: LHG UMQ; 2.1A {Enterococcus hirae} PDB: 2cyd_A* 2db4_A* 3aou_A*
Probab=100.00 E-value=3.6e-36 Score=251.75 Aligned_cols=154 Identities=19% Similarity=0.344 Sum_probs=146.0
Q ss_pred HhhHhhhcChHHHHHHHHHHHHHhhhhhchhhhHhhhhhhhccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy15658 21 IGWFLQTTTPYMWATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLE 100 (235)
Q Consensus 21 ~~~~~~~~~p~~l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~~k~lI~~af~ea~~IYGlIiafli~~ki~ 100 (235)
+.+|+++++|.+++++|++++++++++|++||++++|++++++.+||||+++|++++++|||+|+|||+|+++++..+++
T Consensus 2 ~~~~~~~~~~~~~~~lGa~la~~ls~iGaa~G~~~aG~a~~g~~~~~P~~~~k~li~~~l~e~~~IYGlvva~li~~~l~ 81 (156)
T 2bl2_A 2 MDYLITQNGGMVFAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLG 81 (156)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHGGGHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 35778888899999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ccccccchhhhhhccHHHHHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy15658 101 QYNEKSTDQAVISQNIFGGYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSNLFVKILIVEIFGSAIGLFGLIVGI 180 (235)
Q Consensus 101 ~~~~~~~~~~~~~~s~~~g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pelf~k~lI~~a~~EaiaIyGLVva~ 180 (235)
. +.++.+++.++++||++|++++++|++||+++++++++++||||.++|+++..+|+|+++||+|++++
T Consensus 82 ~-----------~~~~~~g~~~igagl~~Gla~lgagigiG~v~~~~i~a~arqPe~~~~~ii~~a~~Ea~ai~glvia~ 150 (156)
T 2bl2_A 82 S-----------DMSVVQGLNFLGASLPIAFTGLFSGIAQGKVAAAGIQILAKKPEHATKGIIFAAMVETYAILGFVISF 150 (156)
T ss_dssp T-----------TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred c-----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 25678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc
Q psy15658 181 YMTSK 185 (235)
Q Consensus 181 ll~~~ 185 (235)
+++++
T Consensus 151 ll~~~ 155 (156)
T 2bl2_A 151 LLVLN 155 (156)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98764
No 2
>2xqu_A C15_RING, ATP synthase C chain; membrane protein, F1FO-ATP synthase rotor, ION (PROT translocation; HET: FME CVM; 1.84A {Arthrospira platensis} PDB: 2xqs_A* 2xqt_A* 2wie_A* 2w5j_A
Probab=99.69 E-value=1.5e-16 Score=120.13 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=69.9
Q ss_pred cHHHHHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q psy15658 115 NIFGGYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMTSKVKM 188 (235)
Q Consensus 115 s~~~g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~~~~~~ 188 (235)
++..++.++++|+++|++++++|++||+++++++++++|||| +|+++++..+++|+++||+|++++++++.+|+
T Consensus 4 ~~~~~~~~igagl~~Gla~igagig~G~~~~~~i~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~ll~f~~p~ 81 (82)
T 2xqu_A 4 NLTTAASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFANPF 81 (82)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 467889999999999999999999999999999999999999 57789999999999999999999999998875
No 3
>2wgm_A ATP synthase subunit C, sodium ION specific; F1FO-ATP synthase rotor, sodium-motive force, cell inner membrane, CF(0), membrane, transport; HET: F09; 2.35A {Ilyobacter tartaricus} PDB: 1yce_A*
Probab=99.63 E-value=1.4e-15 Score=116.55 Aligned_cols=76 Identities=12% Similarity=0.254 Sum_probs=71.4
Q ss_pred ccHHHHHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy15658 114 QNIFGGYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMTSKVKMG 189 (235)
Q Consensus 114 ~s~~~g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~~~~~~~ 189 (235)
.++.+++.++++|+++ ++++++|++||+++++++++++|||| +|+++++..+++|+++||+|++++++++++|+.
T Consensus 7 ~~~~~~~~~igaGla~-la~iGagig~G~v~~~ai~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~~p~~ 85 (89)
T 2wgm_A 7 KTVVLAASAVGAGTAM-IAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAESTGIYSLVIALILLYANPFV 85 (89)
T ss_dssp HHHHHHHHHHHHHHHG-GGGHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSST
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999 99999999999999999999999999 599999999999999999999999999988875
Q ss_pred h
Q psy15658 190 N 190 (235)
Q Consensus 190 ~ 190 (235)
+
T Consensus 86 ~ 86 (89)
T 2wgm_A 86 G 86 (89)
T ss_dssp T
T ss_pred H
Confidence 4
No 4
>1wu0_A ATP synthase C chain; ATPase, membrane protein, hydrogen ION transport, hydrolase; NMR {Bacillus SP}
Probab=99.59 E-value=2.5e-15 Score=110.89 Aligned_cols=66 Identities=20% Similarity=0.271 Sum_probs=61.7
Q ss_pred HHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15658 119 GYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMTS 184 (235)
Q Consensus 119 g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~~ 184 (235)
++.++++|+++|++++++|++||+++++++++++|||| +|+++++..+++|+++||+|++++++++
T Consensus 2 ~~~~igagl~~Gla~igagig~G~~~~~~~~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lllf 71 (72)
T 1wu0_A 2 SLGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVVFSFIYLG 71 (72)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36789999999999999999999999999999999999 5666999999999999999999999865
No 5
>2x2v_A ATP synthase subunit C; membrane protein, ION transport, ATP synthesis, transmembran CF(0), membrane, transport, C-ring rotor; HET: FME DPV; 2.50A {Bacillus pseudofirmus OF4}
Probab=99.58 E-value=7.1e-15 Score=107.65 Aligned_cols=62 Identities=16% Similarity=0.337 Sum_probs=58.5
Q ss_pred HHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15658 122 MFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMT 183 (235)
Q Consensus 122 ~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~ 183 (235)
++++|+++|++++++|++||+++++++++++|||| +|+++++..+++|+++||+|+++++++
T Consensus 3 ~igagl~~Gla~igagig~G~~~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lll 68 (69)
T 2x2v_A 3 FLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLIL 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999 555599999999999999999999875
No 6
>1a91_A F1FO ATPase subunit C; membrane protein, hydrogen ION transport; NMR {Escherichia coli} SCOP: f.17.1.1 PDB: 1c0v_A 1c17_A 1c99_A 1qo1_K 1aty_A 1l6t_A 1ijp_A
Probab=99.55 E-value=1.9e-14 Score=107.97 Aligned_cols=66 Identities=23% Similarity=0.364 Sum_probs=61.7
Q ss_pred HHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15658 120 YLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMTSK 185 (235)
Q Consensus 120 ~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~~~ 185 (235)
+..+++++++|++++++|++||+++++++++++|||| +|+++++..+++|+++||+|++++++++.
T Consensus 8 m~~~~a~l~~Gla~igagig~G~v~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~ 77 (79)
T 1a91_A 8 LLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFA 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999998 67789999999999999999999998765
No 7
>1wu0_A ATP synthase C chain; ATPase, membrane protein, hydrogen ION transport, hydrolase; NMR {Bacillus SP}
Probab=99.47 E-value=4.8e-14 Score=104.00 Aligned_cols=65 Identities=26% Similarity=0.465 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhhhhhchhhhHhhhhhhhccccccccccch----hhHHHHHHHHHHHHHHHHHHHHHh
Q psy15658 33 WATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIKTK----NLISVIFCEAVAIYGLITAIVLSG 97 (235)
Q Consensus 33 l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~~k----~lI~~af~ea~~IYGlIiafli~~ 97 (235)
+.++|++++++++++|+++|+|+++.+++++++||||.++| +++..+|+|+++||++++++++..
T Consensus 3 ~~~igagl~~Gla~igagig~G~~~~~~~~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lllf 71 (72)
T 1wu0_A 3 LGVLAAAIAVGLGALGAGIGNGLIVSRTIEGIARQPELRPVLQTTMFIGVALVEALPIIGVVFSFIYLG 71 (72)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999999999999999999999999999997666 999999999999999999999864
No 8
>2x2v_A ATP synthase subunit C; membrane protein, ION transport, ATP synthesis, transmembran CF(0), membrane, transport, C-ring rotor; HET: FME DPV; 2.50A {Bacillus pseudofirmus OF4}
Probab=99.46 E-value=5.2e-14 Score=103.05 Aligned_cols=62 Identities=24% Similarity=0.466 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhhhhchhhhHhhhhhhhccccccccccch----hhHHHHHHHHHHHHHHHHHHHHH
Q psy15658 35 TLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIKTK----NLISVIFCEAVAIYGLITAIVLS 96 (235)
Q Consensus 35 ~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~~k----~lI~~af~ea~~IYGlIiafli~ 96 (235)
++|++++++++++|+++|+|+++.+++++++||||.++| +++..+|+|+++||+++++|++.
T Consensus 3 ~igagl~~Gla~igagig~G~~~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~~lvia~lll 68 (69)
T 2x2v_A 3 FLGAAIAAGLAAVAGAIAVAIIVKATIEGTTRQPELRGTLQTLMFIGVPLAEAVPIIAIVISLLIL 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999996655 99999999999999999999975
No 9
>2xqu_A C15_RING, ATP synthase C chain; membrane protein, F1FO-ATP synthase rotor, ION (PROT translocation; HET: FME CVM; 1.84A {Arthrospira platensis} PDB: 2xqs_A* 2xqt_A* 2wie_A* 2w5j_A
Probab=99.45 E-value=1.1e-13 Score=104.49 Aligned_cols=68 Identities=29% Similarity=0.454 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhhhhhchhhhHhhhhhhhccccccccc----cchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy15658 32 MWATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRI----KTKNLISVIFCEAVAIYGLITAIVLSGQL 99 (235)
Q Consensus 32 ~l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~----~~k~lI~~af~ea~~IYGlIiafli~~ki 99 (235)
.+.++|++++++++++|+++|+|+++.+++++++||||. ++++++..+|+|+++|||++++|++....
T Consensus 8 ~~~~igagl~~Gla~igagig~G~~~~~~i~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~ll~f~~ 79 (82)
T 2xqu_A 8 AASVIAAALAVGIGSIGPGLGQGQAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFAN 79 (82)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 578899999999999999999999999999999999995 56699999999999999999999998764
No 10
>2xnd_J ATP synthase lipid-binding protein, mitochondrial; ATP phosphorylase (H+ transporting), ATP synthesis, F1FO ATP synthase, hydrolase, ION transport; HET: ANP; 3.50A {Bos taurus}
Probab=99.43 E-value=2.6e-14 Score=105.51 Aligned_cols=64 Identities=25% Similarity=0.338 Sum_probs=59.5
Q ss_pred HHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy15658 119 GYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMT 183 (235)
Q Consensus 119 g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~ 183 (235)
++.++++||++ ++++++|++||+++++++++++|||| +|+++++..+++|+++||+|+++++++
T Consensus 4 ~~~~igaGLa~-l~~~gagig~G~~~~~~i~~~arqPe~~~~l~~~~~i~~al~Ea~~i~~lvia~lll 71 (72)
T 2xnd_J 4 AAKFIGAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLIL 71 (72)
T ss_dssp TTTTTTTTGGG-GGGHHHHHHHHHHHHHHHHHSSSCSCCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46678999999 99999999999999999999999997 666889999999999999999999875
No 11
>1a91_A F1FO ATPase subunit C; membrane protein, hydrogen ION transport; NMR {Escherichia coli} SCOP: f.17.1.1 PDB: 1c0v_A 1c17_A 1c99_A 1qo1_K 1aty_A 1l6t_A 1ijp_A
Probab=99.38 E-value=6.1e-13 Score=99.78 Aligned_cols=66 Identities=18% Similarity=0.341 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHhhhhhchhhhHhhhhhhhccccccccccc----hhhHHHHHHHHHHHHHHHHHHHHHhh
Q psy15658 33 WATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIKT----KNLISVIFCEAVAIYGLITAIVLSGQ 98 (235)
Q Consensus 33 l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~~----k~lI~~af~ea~~IYGlIiafli~~k 98 (235)
+..++++++++++++|+++|+|+++.+++++++||||.++ ++++..+|+|+++|||++++|++...
T Consensus 8 m~~~~a~l~~Gla~igagig~G~v~~~~i~~~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~ 77 (79)
T 1a91_A 8 LLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFA 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3568899999999999999999999999999999999654 59999999999999999999998764
No 12
>2wgm_A ATP synthase subunit C, sodium ION specific; F1FO-ATP synthase rotor, sodium-motive force, cell inner membrane, CF(0), membrane, transport; HET: F09; 2.35A {Ilyobacter tartaricus} PDB: 1yce_A*
Probab=99.36 E-value=7.7e-13 Score=101.25 Aligned_cols=67 Identities=15% Similarity=0.273 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhhhhhchhhhHhhhhhhhccccccccc----cchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q psy15658 32 MWATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRI----KTKNLISVIFCEAVAIYGLITAIVLSGQL 99 (235)
Q Consensus 32 ~l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~----~~k~lI~~af~ea~~IYGlIiafli~~ki 99 (235)
.+.++|+++++ ++++|+++|+|+++.+++++++||||. ++++++..+|+|+++||++++++++..+.
T Consensus 12 ~~~~igaGla~-la~iGagig~G~v~~~ai~a~arqPe~~~~l~~~~ii~~al~Ea~ai~glvia~lllf~~ 82 (89)
T 2wgm_A 12 AASAVGAGTAM-IAGIGPGVGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAESTGIYSLVIALILLYAN 82 (89)
T ss_dssp HHHHHHHHHHG-GGGHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999 999999999999999999999999995 88899999999999999999999998765
No 13
>2bl2_A V-type sodium ATP synthase subunit K; V-type ATPase, K-ring, membrane rotor, sodium transporter, H ION transport, hydrolase, transmembrane; HET: LHG UMQ; 2.1A {Enterococcus hirae} PDB: 2cyd_A* 2db4_A* 3aou_A*
Probab=99.36 E-value=1.9e-12 Score=108.16 Aligned_cols=70 Identities=16% Similarity=0.330 Sum_probs=67.3
Q ss_pred HHHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy15658 118 GGYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSNLFVKILIVEIFGSAIGLFGLIVGIYMTSKVK 187 (235)
Q Consensus 118 ~g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pelf~k~lI~~a~~EaiaIyGLVva~ll~~~~~ 187 (235)
..+.+++++++++++++++++++++++.+++++.+||||+++|+++..+++|+++|||||+++++..+.+
T Consensus 12 ~~~~~lGa~la~~ls~iGaa~G~~~aG~a~~g~~~~~P~~~~k~li~~~l~e~~~IYGlvva~li~~~l~ 81 (156)
T 2bl2_A 12 MVFAVLAMATATIFSGIGSAKGVGMTGEAAAALTTSQPEKFGQALILQLLPGTQGLYGFVIAFLIFINLG 81 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHGGGHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4689999999999999999999999999999999999999999999999999999999999999998765
No 14
>4f4s_A ATP synthase subunit 9, mitochondrial; C10 ring, F1FO ATP synthase, oligomycin, membr protein-antibiotic complex; HET: FME EFO; 1.90A {Saccharomyces cerevisiae} PDB: 2wpd_J* 2xok_K* 3u2y_K* 3u32_K* 3ud0_K* 3zry_J* 3u2f_K*
Probab=99.33 E-value=4.2e-12 Score=94.72 Aligned_cols=69 Identities=23% Similarity=0.284 Sum_probs=63.8
Q ss_pred HHHHHHHHHhHHHHHHHhhHhHHHHHHHHHHHHHHhhhCch----hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy15658 116 IFGGYLMFGAGLSVGLVNLFCGMAVGIVGSGAALADAANSN----LFVKILIVEIFGSAIGLFGLIVGIYMTSK 185 (235)
Q Consensus 116 ~~~g~~~lgagLavGla~lgsgig~G~~gaaa~~a~A~~Pe----lf~k~lI~~a~~EaiaIyGLVva~ll~~~ 185 (235)
+..+.+++++|+++ ++..++|+|||.+.++.+++++|||| +|+.+++..++.|+.+||+|+++|++++.
T Consensus 3 lv~aak~IGaGlA~-ig~~G~giGiG~vfg~~i~~~aRnP~~~~~l~~~~ilG~Al~Ea~glf~LvvA~lllFa 75 (76)
T 4f4s_A 3 LVLAAKYIGAGIST-IGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFG 75 (76)
T ss_dssp HHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHH-HHcchHHHhHHHHHHHHHHHHhcChhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45778899999998 99999999999999999999999995 78899999999999999999999999764
No 15
>2xnd_J ATP synthase lipid-binding protein, mitochondrial; ATP phosphorylase (H+ transporting), ATP synthesis, F1FO ATP synthase, hydrolase, ION transport; HET: ANP; 3.50A {Bos taurus}
Probab=99.28 E-value=8.7e-13 Score=97.31 Aligned_cols=63 Identities=25% Similarity=0.414 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHhhhhhchhhhHhhhhhhhcccccccccc----chhhHHHHHHHHHHHHHHHHHHHHH
Q psy15658 33 WATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIK----TKNLISVIFCEAVAIYGLITAIVLS 96 (235)
Q Consensus 33 l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~----~k~lI~~af~ea~~IYGlIiafli~ 96 (235)
+.++|+++++ ++++|+++|+|+++.+++++++||||.+ +++++..+|+|+++||++++++++.
T Consensus 5 ~~~igaGLa~-l~~~gagig~G~~~~~~i~~~arqPe~~~~l~~~~~i~~al~Ea~~i~~lvia~lll 71 (72)
T 2xnd_J 5 AKFIGAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLIL 71 (72)
T ss_dssp TTTTTTTGGG-GGGHHHHHHHHHHHHHHHHHSSSCSCCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999 9999999999999999999999999955 4689999999999999999999874
No 16
>4f4s_A ATP synthase subunit 9, mitochondrial; C10 ring, F1FO ATP synthase, oligomycin, membr protein-antibiotic complex; HET: FME EFO; 1.90A {Saccharomyces cerevisiae} PDB: 2wpd_J* 2xok_K* 3u2y_K* 3u32_K* 3ud0_K* 3zry_J* 3u2f_K*
Probab=99.01 E-value=2.6e-10 Score=85.09 Aligned_cols=65 Identities=25% Similarity=0.447 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhhhhhchhhhHhhhhhhhcccccccccc----chhhHHHHHHHHHHHHHHHHHHHHHh
Q psy15658 32 MWATLGIALSVALSVVGAALGIHTVGVSIIGGGVKAPRIK----TKNLISVIFCEAVAIYGLITAIVLSG 97 (235)
Q Consensus 32 ~l~~lGagLa~gLsaIGsa~Gig~ag~aa~ga~~~~Pe~~----~k~lI~~af~ea~~IYGlIiafli~~ 97 (235)
...++|++++. ++.+|+++|+|.+..+.+.+.+||||.. +.+++..++.|+.+||+|+++|+++.
T Consensus 6 aak~IGaGlA~-ig~~G~giGiG~vfg~~i~~~aRnP~~~~~l~~~~ilG~Al~Ea~glf~LvvA~lllF 74 (76)
T 4f4s_A 6 AAKYIGAGIST-IGLLGAGIGIAIVFAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLF 74 (76)
T ss_dssp HHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH-HHcchHHHhHHHHHHHHHHHHhcChhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45689999998 8999999999999999999999999865 55899999999999999999999875
Done!