Query psy15660
Match_columns 178
No_of_seqs 171 out of 1160
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 18:21:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15660.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15660hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7j_A Myosin VA; motor protei 100.0 5E-44 1.7E-48 328.2 5.0 138 1-178 177-318 (795)
2 1lkx_A Myosin IE heavy chain; 100.0 2.2E-43 7.4E-48 320.3 3.3 138 1-178 115-259 (697)
3 1kk8_A Myosin heavy chain, str 100.0 4.4E-43 1.5E-47 323.4 3.6 138 1-178 190-341 (837)
4 2dfs_A Myosin-5A; myosin-V, in 100.0 4.8E-43 1.6E-47 330.7 3.9 138 1-178 177-318 (1080)
5 4db1_A Myosin-7; S1DC, cardiac 100.0 6.6E-43 2.3E-47 320.0 3.1 138 1-178 192-342 (783)
6 1w9i_A Myosin II heavy chain; 100.0 7.5E-43 2.6E-47 318.9 1.1 138 1-178 193-337 (770)
7 2v26_A Myosin VI; calmodulin-b 100.0 1.7E-42 5.7E-47 317.9 0.8 136 1-178 161-326 (784)
8 1g8x_A Myosin II heavy chain f 100.0 2.7E-42 9.1E-47 323.6 1.5 138 1-178 193-337 (1010)
9 4anj_A Unconventional myosin-V 100.0 3.1E-42 1.1E-46 323.1 0.2 136 1-178 165-330 (1052)
10 1i84_S Smooth muscle myosin he 100.0 4.7E-42 1.6E-46 327.4 0.0 138 1-178 190-344 (1184)
11 2ycu_A Non muscle myosin 2C, a 100.0 5.4E-42 1.8E-46 321.5 0.1 137 1-178 167-313 (995)
12 1lkx_A Myosin IE heavy chain; 98.3 1.3E-07 4.5E-12 86.1 1.4 39 65-103 141-179 (697)
13 2v26_A Myosin VI; calmodulin-b 98.3 1.3E-07 4.4E-12 87.1 0.5 38 66-103 184-221 (784)
14 1w7j_A Myosin VA; motor protei 98.3 1.4E-07 4.8E-12 87.0 0.5 38 66-103 202-239 (795)
15 1kk8_A Myosin heavy chain, str 98.3 1.4E-07 4.9E-12 87.3 0.5 38 66-103 225-262 (837)
16 4db1_A Myosin-7; S1DC, cardiac 98.2 1.5E-07 5.3E-12 86.5 0.5 38 66-103 226-263 (783)
17 1w9i_A Myosin II heavy chain; 98.2 2.1E-07 7.1E-12 85.5 0.5 38 66-103 221-258 (770)
18 2ycu_A Non muscle myosin 2C, a 98.2 2.3E-07 7.9E-12 87.5 0.5 38 66-103 199-236 (995)
19 4anj_A Unconventional myosin-V 98.2 2.6E-07 8.8E-12 87.4 0.5 39 65-103 187-225 (1052)
20 1g8x_A Myosin II heavy chain f 98.2 2.7E-07 9.2E-12 87.1 0.5 38 66-103 221-258 (1010)
21 1i84_S Smooth muscle myosin he 98.1 2.5E-07 8.6E-12 88.6 -0.2 38 66-103 229-266 (1184)
22 2dfs_A Myosin-5A; myosin-V, in 98.1 2.4E-07 8.4E-12 87.9 -0.7 39 65-103 201-239 (1080)
23 1bi6_H Bromelain inhibitor VI; 22.0 32 0.0011 18.6 0.9 11 43-53 24-34 (41)
No 1
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=5e-44 Score=328.22 Aligned_cols=138 Identities=57% Similarity=0.884 Sum_probs=124.7
Q ss_pred CceEEeeeCCCCcchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccccCC
Q psy15660 1 MRYFATVGGSQTETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIRNDN 80 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~rN~n 80 (178)
|+|||+++++...+.+++||+++||||||||||||+||||||||||||+|+||.+|.|.||+|++||
T Consensus 177 ~~yla~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YL------------- 243 (795)
T 1w7j_A 177 MRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYL------------- 243 (795)
T ss_dssp HHHHHHHTCCSSSSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEEC-------------
T ss_pred HHHHHhhcCCCCccchHHHHHHHHHHHHHhcCccCCCCCCccccceEEEEEECCCCCEeeeeceEEe-------------
Confidence 6899999987766789999999999999999999999999999999999999988777777777665
Q ss_pred CCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccC--CCCCcccCCCCccchhhhh--hccCC
Q psy15660 81 SSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCA--RDKYPYLLLDEPDSFQYIR--ECCEI 156 (178)
Q Consensus 81 ssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~--~~e~~~l~l~d~~~f~~l~--~~~~i 156 (178)
|||+||+.|+++|||||||||++++ .++++.++|.++++|.|++ ++..+
T Consensus 244 ---------------------------LEKSRVv~q~~gERNfHIFYqLlag~~~~~~~~l~L~~~~~y~yl~~~~~~~~ 296 (795)
T 1w7j_A 244 ---------------------------LEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVI 296 (795)
T ss_dssp ---------------------------CCGGGGTCCCTTCCSBHHHHHHHHTTTSGGGGGGCCCCTTTSHHHHTTSCCCC
T ss_pred ---------------------------cccceEeccCCCCCchHhHHHHHcCCCHHHHHHccCCChHhCccccCCCCCcC
Confidence 5788888999999999999999976 4567789999999999998 46788
Q ss_pred CCCChHHHHHHHHHHHHhcCCC
Q psy15660 157 PGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 157 ~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
++++|.++|..++.||++|||+
T Consensus 297 ~~~dD~~~f~~~~~Am~~lG~s 318 (795)
T 1w7j_A 297 DGIDDAKEMVNTRQACTLLGIS 318 (795)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCC
T ss_pred CCccHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999996
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=2.2e-43 Score=320.26 Aligned_cols=138 Identities=37% Similarity=0.642 Sum_probs=121.5
Q ss_pred CceEEeeeCCCC--cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeeccccccccc
Q psy15660 1 MRYFATVGGSQT--ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIRN 78 (178)
Q Consensus 1 ~~~~~~~~~~~~--~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~rN 78 (178)
|+|||+++++.. ...++++|+++||||||||||||+||||||||||||+|+|+.+|.|.||+|++||
T Consensus 115 ~~yla~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~yL----------- 183 (697)
T 1lkx_A 115 MQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYL----------- 183 (697)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHBBCCSSCSSCBCSEEEEEEEECTTCCEEEEEEEEEC-----------
T ss_pred HHHHHhhcCCCCCccccHHHHHHhcchHHHHhcCcccCCCCCcchhheeEEEEECCCCCEeeeeeeeee-----------
Confidence 689999987332 2578999999999999999999999999999999999999988777777777665
Q ss_pred CCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCCC-Cccchhhhh--hc
Q psy15660 79 DNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLLD-EPDSFQYIR--EC 153 (178)
Q Consensus 79 ~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l~-d~~~f~~l~--~~ 153 (178)
|||+||+.|+++|||||||||++++. +++..++|. ++++|.|++ ++
T Consensus 184 -----------------------------LEKSRVv~q~~gERnfHIFYqllaG~~~~~~~~l~L~~~~~~y~yL~~~~~ 234 (697)
T 1lkx_A 184 -----------------------------LEKSRVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGC 234 (697)
T ss_dssp -----------------------------CCGGGGTCCCTTCCCBHHHHHHHTTSCHHHHHHHTCCSCGGGSHHHHHTTC
T ss_pred -----------------------------ccCceeeeecCCCCceeehhHHhcCCCHHHHHHhcCCCChhhCccccCCCC
Confidence 57888889999999999999999773 346678998 999999997 57
Q ss_pred cCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 154 CEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 154 ~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
.++++++|.++|..++.||++|||+
T Consensus 235 ~~~~~~dD~~~f~~~~~Am~~lG~~ 259 (697)
T 1lkx_A 235 FDVSTIDDSGEFKIIVKAMETLGLK 259 (697)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCchHHHHHHHHHHHHhCCCC
Confidence 7889999999999999999999996
No 3
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=4.4e-43 Score=323.39 Aligned_cols=138 Identities=39% Similarity=0.704 Sum_probs=121.5
Q ss_pred CceEEeeeCCCC----------cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeec
Q psy15660 1 MRYFATVGGSQT----------ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAI 70 (178)
Q Consensus 1 ~~~~~~~~~~~~----------~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~ 70 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+||.+|.|.||+|++||
T Consensus 190 ~~yla~~~~~~~~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YL--- 266 (837)
T 1kk8_A 190 IMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYL--- 266 (837)
T ss_dssp HHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSSEEEEEEEEEC---
T ss_pred HHHHHHhcccCCcccccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCCceeEEEEEECCCCCEeeeEEEEEe---
Confidence 689999986542 2579999999999999999999999999999999999999988777777777666
Q ss_pred ccccccccCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccC--CCCCcccCC-CCccch
Q psy15660 71 GNAKTIRNDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCA--RDKYPYLLL-DEPDSF 147 (178)
Q Consensus 71 ~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~--~~e~~~l~l-~d~~~f 147 (178)
|||+||+.|+++|||||||||++++ .+++..++| .++++|
T Consensus 267 -------------------------------------LEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~~y 309 (837)
T 1kk8_A 267 -------------------------------------LEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLY 309 (837)
T ss_dssp -------------------------------------CCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGC
T ss_pred -------------------------------------ccCceeeeecCCCCceeehHHHHcCCCHHHHHHhCCCCChhhc
Confidence 5788888999999999999999976 345667889 789999
Q ss_pred hhhh-hccCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 148 QYIR-ECCEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 148 ~~l~-~~~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
.|++ ++..+++++|.++|..++.||++|||+
T Consensus 310 ~yL~~g~~~~~~~dD~~~f~~~~~Am~~lGfs 341 (837)
T 1kk8_A 310 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFT 341 (837)
T ss_dssp TTTCSSCSCBTTBCHHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCcccCCcChHHHHHHHHHHHHhcCcC
Confidence 9997 667889999999999999999999996
No 4
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=4.8e-43 Score=330.73 Aligned_cols=138 Identities=57% Similarity=0.884 Sum_probs=124.9
Q ss_pred CceEEeeeCCCCcchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccccCC
Q psy15660 1 MRYFATVGGSQTETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIRNDN 80 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~rN~n 80 (178)
|+|||+++++...+.++++|+++||||||||||||+||||||||||||+|+||.+|.|.||+|++||
T Consensus 177 ~~yla~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yL------------- 243 (1080)
T 2dfs_A 177 MRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYL------------- 243 (1080)
T ss_dssp HHHHHHTTTCCTTTCTHHHHHHHHHHHHHHHEEEETTEEEEECSEEEEEEEECTTCCEEEEEEEEEC-------------
T ss_pred HHHHHhhccCCCccchHHHHHHHHHHHHHhcCCcCCCCCCccccceeEEEEECCCCCEeeecceeEe-------------
Confidence 6899999987766789999999999999999999999999999999999999988777777777665
Q ss_pred CCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccC--CCCCcccCCCCccchhhhh--hccCC
Q psy15660 81 SSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCA--RDKYPYLLLDEPDSFQYIR--ECCEI 156 (178)
Q Consensus 81 ssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~--~~e~~~l~l~d~~~f~~l~--~~~~i 156 (178)
|||+||+.++++|||||||||++++ .+++..++|.++++|.|++ ++..+
T Consensus 244 ---------------------------LEKsRVv~q~~~ERnfHIFYqllag~~~~~~~~l~L~~~~~y~yl~~~~~~~~ 296 (1080)
T 2dfs_A 244 ---------------------------LEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVI 296 (1080)
T ss_dssp ---------------------------CCCGGGTCCCTTCCSBHHHHHHHHTTTSSGGGGTCCCCTTTCTTTSTTSCCSC
T ss_pred ---------------------------ecCceeeccCCCCCcchhHHHHHcCCChHHHHHccCCCHHhcCcccCCCCCCC
Confidence 5788899999999999999999976 4567789999999999998 56789
Q ss_pred CCCChHHHHHHHHHHHHhcCCC
Q psy15660 157 PGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 157 ~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
+|++|.++|..++.||++|||+
T Consensus 297 ~~~dD~~~f~~~~~A~~~lg~~ 318 (1080)
T 2dfs_A 297 DGIDDAKEMVNTRQACTLLGIS 318 (1080)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCC
T ss_pred CCccHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999996
No 5
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=6.6e-43 Score=319.95 Aligned_cols=138 Identities=38% Similarity=0.685 Sum_probs=120.3
Q ss_pred CceEEeeeCCCC---------cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecc
Q psy15660 1 MRYFATVGGSQT---------ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIG 71 (178)
Q Consensus 1 ~~~~~~~~~~~~---------~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~ 71 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+||.+|.|.||+|++||
T Consensus 192 m~yla~v~~~~~~~~~~~~~~~~~ve~~il~snpiLEAFGNAkT~rNdNSSRFGK~i~i~F~~~g~i~Ga~I~~YL---- 267 (783)
T 4db1_A 192 IQYFAVIAAIGDRSKKDQSPGKGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYL---- 267 (783)
T ss_dssp HHHHHHHSBCCCC-------CCSCHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSBEEEEEEEEEC----
T ss_pred HHhhhhhccCCCccccccccccccHHHHHHHhHHHHHhccCcccCCCCCCCccceeEEEEECCCCCEeeeEEEEee----
Confidence 689998876432 2579999999999999999999999999999999999999988777777777666
Q ss_pred cccccccCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCC-CCccchh
Q psy15660 72 NAKTIRNDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLL-DEPDSFQ 148 (178)
Q Consensus 72 ~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l-~d~~~f~ 148 (178)
|||+||+.|+++||||||||||+++. +++..+.| .++.+|.
T Consensus 268 ------------------------------------LEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~~y~ 311 (783)
T 4db1_A 268 ------------------------------------LEKSRVIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYA 311 (783)
T ss_dssp ------------------------------------CCGGGGTCCCTTCCSBHHHHHHHTCSSHHHHHHTTCCSCGGGCG
T ss_pred ------------------------------------cccceeeccCCCCCcchhHHHHHcCCCHHHHHHhccCCCHHHCc
Confidence 57888889999999999999999773 34567788 4899999
Q ss_pred hhh-hccCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 149 YIR-ECCEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 149 ~l~-~~~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
|++ ++..+++++|.++|..++.||++|||+
T Consensus 312 yl~~g~~~~~~~dD~~~f~~~~~Am~~lGfs 342 (783)
T 4db1_A 312 FISQGETTVASIDDAEELMATDNAFDVLGFT 342 (783)
T ss_dssp GGCSSCCCCTTCCHHHHHHHHHHHHHHTTCC
T ss_pred cccCCCcccCCCCcHHHHHHHHHHHHHcCCC
Confidence 998 677899999999999999999999996
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=7.5e-43 Score=318.92 Aligned_cols=138 Identities=48% Similarity=0.773 Sum_probs=120.7
Q ss_pred CceEEeeeCCCC---cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccc
Q psy15660 1 MRYFATVGGSQT---ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIR 77 (178)
Q Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~r 77 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+|+.+|.|.||+|++||
T Consensus 193 ~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~yL---------- 262 (770)
T 1w9i_A 193 IQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYL---------- 262 (770)
T ss_dssp HHHHHHHHCC------CHHHHHHHHHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEEC----------
T ss_pred HHHHHHhccccCCcccCcHHHHHHHHHHHHHHhCCCcCCCCCCcCCcceEEEEEECCCCCEeeeEEEEEe----------
Confidence 689999987543 3679999999999999999999999999999999999999988777777777665
Q ss_pred cCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCCCCccchhh-hh-hc
Q psy15660 78 NDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLLDEPDSFQY-IR-EC 153 (178)
Q Consensus 78 N~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l~d~~~f~~-l~-~~ 153 (178)
|||+||+.|+++|||||||||++++. +++..++|.++++|.| ++ ++
T Consensus 263 ------------------------------LEKSRVv~q~~gERnfHIFYqLlaG~~~~~~~~l~L~~~~~y~yll~~g~ 312 (770)
T 1w9i_A 263 ------------------------------LEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGC 312 (770)
T ss_dssp ------------------------------CCGGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCTTTSSSSC
T ss_pred ------------------------------ccCceeecccCCCCcchhHHHHhcCCCHHHHHHhCCCChhhccccccCCc
Confidence 57888889999999999999999763 3466789999999999 66 67
Q ss_pred cCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 154 CEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 154 ~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
..+++++|.++|..++.||.+|||+
T Consensus 313 ~~~~~~dD~~~f~~~~~Am~~lGf~ 337 (770)
T 1w9i_A 313 VDIKGVSDSEEFKITRQAMDIVGFS 337 (770)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred cccCCCchHHHHHHHHHHHHHcCCC
Confidence 8899999999999999999999996
No 7
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.7e-42 Score=317.94 Aligned_cols=136 Identities=39% Similarity=0.757 Sum_probs=114.3
Q ss_pred CceEEeeeCCCCcchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccccCC
Q psy15660 1 MRYFATVGGSQTETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIRNDN 80 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~rN~n 80 (178)
|+|||+++|+. ..+++||+++||||||||||||+||||||||||||+|+|+.+|.|.||+|++||
T Consensus 161 ~~yla~~~~~~--~~ie~~il~snpiLEAFGNAKT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I~~YL------------- 225 (784)
T 2v26_A 161 LRYLTESYGTG--QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYL------------- 225 (784)
T ss_dssp HHHHHHHHC--------CHHHHTHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEEC-------------
T ss_pred HHHHHhhcCCC--CcHHHHHHHHHHHHHHhCCCcCCCCCCcchhheEEEEEEecCCcEeeeeeeeee-------------
Confidence 68999887754 579999999999999999999999999999999999999988777777777666
Q ss_pred CCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccC--CCCCcccCCCCccchhhhh-hc----
Q psy15660 81 SSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCA--RDKYPYLLLDEPDSFQYIR-EC---- 153 (178)
Q Consensus 81 ssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~--~~e~~~l~l~d~~~f~~l~-~~---- 153 (178)
|||+||+.|+++|||||||||++++ .+++..++|.++++|+|++ ++
T Consensus 226 ---------------------------LEKSRVv~q~~gERNfHIFYqLlaG~~~~~~~~l~L~~~~~y~yL~~g~~~~~ 278 (784)
T 2v26_A 226 ---------------------------LEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYF 278 (784)
T ss_dssp ---------------------------CCCGGGTCCCTTCCSBHHHHHHHHHSCHHHHHHTTCCCGGGCHHHHTSCCCCB
T ss_pred ---------------------------ccCCeEeeecCCCCcchhhHHHHcCCCHHHHHHcCCCChhhCccccCCCcccc
Confidence 5788888999999999999999976 3346678999999999997 22
Q ss_pred -----------------------cCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 154 -----------------------CEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 154 -----------------------~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
+.+++++|.++|..++.||++|||+
T Consensus 279 ~~~~~~~~i~~~~~s~~~~~~~~~~~~~~dD~~~f~~~~~Am~~lG~~ 326 (784)
T 2v26_A 279 ANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLD 326 (784)
T ss_dssp CCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred ccccccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 2456899999999999999999996
No 8
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=2.7e-42 Score=323.62 Aligned_cols=138 Identities=47% Similarity=0.781 Sum_probs=122.2
Q ss_pred CceEEeeeCCCC---cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccc
Q psy15660 1 MRYFATVGGSQT---ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIR 77 (178)
Q Consensus 1 ~~~~~~~~~~~~---~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~r 77 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+|+.+|.|.||+|++||
T Consensus 193 ~~yla~~~~~~~~~~~~~ie~~il~snpiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yL---------- 262 (1010)
T 1g8x_A 193 IQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYL---------- 262 (1010)
T ss_dssp HHHHHHHHCCCCTTTSSHHHHHHHHHHHHHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEEEEEC----------
T ss_pred HHHHHHhcccCCCcccchHHHHHHHHHHHHHHhCCCcCCCCCCccccceEEEEEECCCCCCcceEEEEEE----------
Confidence 689999987653 3689999999999999999999999999999999999999988777777777666
Q ss_pred cCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCCCCccchhhhh--hc
Q psy15660 78 NDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLLDEPDSFQYIR--EC 153 (178)
Q Consensus 78 N~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l~d~~~f~~l~--~~ 153 (178)
|||+||+.|+++|||||||||+++|. +++..++|.++.+|.|++ +|
T Consensus 263 ------------------------------LEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~~~~~ 312 (1010)
T 1g8x_A 263 ------------------------------LEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGC 312 (1010)
T ss_dssp ------------------------------CCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHHTCCCGGGCGGGSSSSC
T ss_pred ------------------------------cCCceeeeecCCCCcchhHHHHHcCCCHHHHHHhCCCChHhcchhcCCCc
Confidence 57888889999999999999999763 346678999999999998 45
Q ss_pred cCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 154 CEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 154 ~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
.+++|++|.++|..++.||++|||+
T Consensus 313 ~~~~~~dD~~~f~~~~~A~~~lg~~ 337 (1010)
T 1g8x_A 313 VDIKGVSDEDEFKITRQAMDIVGFS 337 (1010)
T ss_dssp CCCBTCCHHHHHHHHHHHHHHHTCC
T ss_pred cccCCCChHHHHHHHHHHHHHcCCC
Confidence 8899999999999999999999996
No 9
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=3.1e-42 Score=323.11 Aligned_cols=136 Identities=38% Similarity=0.729 Sum_probs=118.3
Q ss_pred CceEEeeeCCCCcchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccccccccCC
Q psy15660 1 MRYFATVGGSQTETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNAKTIRNDN 80 (178)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~~~~rN~n 80 (178)
|+|||.++++. ..+++||+++||||||||||||+||||||||||||+|+||.+|.|.||+|++||
T Consensus 165 m~yLa~~~~~~--~~ie~~Il~snpiLEAFGNAKT~rNdNSSRFGK~iel~F~~~G~i~Ga~I~~YL------------- 229 (1052)
T 4anj_A 165 LRYLTESYGTG--QDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYL------------- 229 (1052)
T ss_dssp HHHHHHHHCC-----CTTHHHHTHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEEC-------------
T ss_pred HHHHHHhcCCC--ccHHHHHHHHHHHHHhccCCCCCCCCCcCCceeEEEEEECCCCCEEEEEEeccc-------------
Confidence 68999888764 568999999999999999999999999999999999999988777777777665
Q ss_pred CCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccC--CCCCcccCCCCccchhhhh-------
Q psy15660 81 SSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCA--RDKYPYLLLDEPDSFQYIR------- 151 (178)
Q Consensus 81 ssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~--~~e~~~l~l~d~~~f~~l~------- 151 (178)
|||+||+.|+++||||||||||++| .+++..++|.++++|+|++
T Consensus 230 ---------------------------LEKSRVv~q~~gERNfHIFYqLlaGa~~~~r~~l~L~~~~~y~yL~qg~~~~~ 282 (1052)
T 4anj_A 230 ---------------------------LEKSRICVQGKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYF 282 (1052)
T ss_dssp ---------------------------CCSGGGTCCCTTCCSBHHHHHHHHHCCHHHHHHHTCCCGGGCHHHHTSCCCCB
T ss_pred ---------------------------cccCceeecCCCCCCcccHHHHhcCCCHHHHHHcCCCChHhCchhcCCCcccc
Confidence 5788899999999999999999966 3456789999999999986
Q ss_pred ---------------------hccCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 152 ---------------------ECCEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 152 ---------------------~~~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
++..+++++|.++|..++.||++|||+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~dD~~~f~~~~~Am~~lGfs 330 (1052)
T 4anj_A 283 ANKETDKQILQNRKSPEYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLD 330 (1052)
T ss_dssp CCHHHHTTSCGGGCCHHHHHHCCBCCSSCCHHHHHHHHHHHHHHHTCC
T ss_pred ccccchhhhcccccchhhccCCCccCCCcchHHHHHHHHHHHHHcCCC
Confidence 256789999999999999999999996
No 10
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=4.7e-42 Score=327.39 Aligned_cols=138 Identities=40% Similarity=0.664 Sum_probs=121.7
Q ss_pred CceEEeeeCCCC--------------cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeee
Q psy15660 1 MRYFATVGGSQT--------------ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTC 66 (178)
Q Consensus 1 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~y 66 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+||.+|.|.||+|++|
T Consensus 190 ~~yla~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~npileaFGnAkT~rN~NSSRfgk~~~i~f~~~g~i~ga~i~~y 269 (1184)
T 1i84_S 190 IQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269 (1184)
T ss_dssp HHHHHHHSSCCSCC------CTTCCCCCSHHHHHHHHHHHHTTTTEEEETTEEEEECSCEEEEEEECSSSCEEEEEEEEC
T ss_pred HHHHHHHhcCCCcccccccccccccccchHHHHHHHHHHHHHHhcCCcCCCCccccccceeEEEEECCCCCEeeeEEeEe
Confidence 689999987632 367899999999999999999999999999999999999998777777776666
Q ss_pred eeecccccccccCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCCCCc
Q psy15660 67 HFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLLDEP 144 (178)
Q Consensus 67 lle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l~d~ 144 (178)
| |||+||+.++++|||||||||+++|. +++..++|.++
T Consensus 270 l----------------------------------------LEksRv~~q~~~ErnfhiFYqll~g~~~~~~~~l~l~~~ 309 (1184)
T 1i84_S 270 L----------------------------------------LEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGF 309 (1184)
T ss_dssp C----------------------------------------CCCGGGSCCCTTCCCCTHHHHHHHHCCHHHHHHTTCCCT
T ss_pred e----------------------------------------cCCceeeeecCCCCchhhHHHHHcCCCHHHHHHcCCCCh
Confidence 5 57888999999999999999999763 34567899999
Q ss_pred cchhhhh-hccCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 145 DSFQYIR-ECCEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 145 ~~f~~l~-~~~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
.+|.|++ ++..++|++|.++|..++.||.+|||+
T Consensus 310 ~~~~yl~~~~~~~~~~~d~~~f~~~~~a~~~lg~~ 344 (1184)
T 1i84_S 310 NNYTFLSNGHVPIPAQQDDEMFQETLEAMTIMGFT 344 (1184)
T ss_dssp TSCSSCTTSSCCCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred HhCCccCCCCcCCCCCChHHHHHHHHHHHHhceeC
Confidence 9999998 677899999999999999999999996
No 11
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=5.4e-42 Score=321.52 Aligned_cols=137 Identities=39% Similarity=0.643 Sum_probs=119.6
Q ss_pred CceEEeeeCCCC-------cchhhHHHHhhhhHHHHhccccccCCCCCCCcceeEEEeeccccccccceeeeeeeecccc
Q psy15660 1 MRYFATVGGSQT-------ETQVEKKVLAYSPIMEAIGNAKTIRNDNRSRFGKFTELHFNKHYNIIGASMRTCHFAIGNA 73 (178)
Q Consensus 1 ~~~~~~~~~~~~-------~~~~~~~~~~~~~ileafgna~t~rN~NSSRFGKfi~l~f~~~g~i~Ga~I~~ylle~~~~ 73 (178)
|+|||+++++.. .+.++++|+++||||||||||||+||||||||||||+|+|+.+|.|.||+|++||
T Consensus 167 ~~yla~~~~~~~~~~~~~~~~~ie~~il~~npiLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i~~yL------ 240 (995)
T 2ycu_A 167 IQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYL------ 240 (995)
T ss_dssp HHHHHHHSCCSSSCSSSCCCC-CCSTTTSHHHHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEEEEEC------
T ss_pred HHHHHHhcccCCccccccccccHHHHHHHHHHHHHHhcCccCCCCCCCCccceEEEEEECCCCCEeeeEEEEEe------
Confidence 689999987542 2578999999999999999999999999999999999999988777777777766
Q ss_pred cccccCCCCcceeeEEEEecccccccccchhhhccccceEEeecCCCCcceEeeeeccCC--CCCcccCCCCccchhhhh
Q psy15660 74 KTIRNDNSSRFGKFTELHFNKHYNIIGASMRTYLLEKSRVVFQAPNERNYHVFYQLCCAR--DKYPYLLLDEPDSFQYIR 151 (178)
Q Consensus 74 ~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~~~~llEk~Rv~~~~~~Ernfhifyql~~~~--~e~~~l~l~d~~~f~~l~ 151 (178)
|||+||+.|+++|||||||||++++. +++..++|.++.+|.|++
T Consensus 241 ----------------------------------LEksRvv~q~~~ERnfHIFYqll~g~~~~~~~~l~L~~~~~y~yl~ 286 (995)
T 2ycu_A 241 ----------------------------------LEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCSHYRFLT 286 (995)
T ss_dssp ----------------------------------CCGGGGTCCCTTCCCBHHHHHHHHHCCHHHHHHTTCCCGGGCTTST
T ss_pred ----------------------------------ccCCeeeccCCCCCcchhHHHHHcCCCHHHHHHcCCCChHHccccc
Confidence 57888889999999999999999763 346678999999999997
Q ss_pred -hccCCCCCChHHHHHHHHHHHHhcCCC
Q psy15660 152 -ECCEIPGVNDEEGFEETQQAFVTLGEN 178 (178)
Q Consensus 152 -~~~~i~g~~d~e~~~~l~~Al~~LG~~ 178 (178)
+...++| +|.++|..++.||++|||+
T Consensus 287 ~~~~~~~~-dD~~~f~~~~~A~~~lg~~ 313 (995)
T 2ycu_A 287 NGPSSSPG-QERELFQETLESLRVLGFS 313 (995)
T ss_dssp TCSCSSTT-THHHHHHHHHHHHHHTTCC
T ss_pred CCccccCC-cHHHHHHHHHHHHHHcCCC
Confidence 5677889 9999999999999999996
No 12
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=98.30 E-value=1.3e-07 Score=86.07 Aligned_cols=39 Identities=54% Similarity=0.760 Sum_probs=36.3
Q ss_pred eeeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 65 TCHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 65 ~ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
+.|.++|+|+|.||+||||||||++++|+..+.+.||.+
T Consensus 141 piLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 179 (697)
T 1lkx_A 141 PLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKI 179 (697)
T ss_dssp HHHHHHHBBCCSSCSSCBCSEEEEEEEECTTCCEEEEEE
T ss_pred hHHHHhcCcccCCCCCcchhheeEEEEECCCCCEeeeee
Confidence 356679999999999999999999999999999999997
No 13
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=98.26 E-value=1.3e-07 Score=87.14 Aligned_cols=38 Identities=55% Similarity=0.887 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..+.|.||.+
T Consensus 184 iLEAFGNAKT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 221 (784)
T 2v26_A 184 LLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 221 (784)
T ss_dssp HHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhCCCcCCCCCCcchhheEEEEEEecCCcEeeeee
Confidence 56679999999999999999999999999999999997
No 14
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=98.25 E-value=1.4e-07 Score=86.97 Aligned_cols=38 Identities=66% Similarity=0.985 Sum_probs=36.0
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..|.|.||.+
T Consensus 202 iLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 239 (795)
T 1w7j_A 202 IMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANM 239 (795)
T ss_dssp HHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhcCccCCCCCCccccceEEEEEECCCCCEeeeec
Confidence 56679999999999999999999999999999999997
No 15
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=98.25 E-value=1.4e-07 Score=87.35 Aligned_cols=38 Identities=55% Similarity=0.774 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..|.|.||.+
T Consensus 225 iLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 262 (837)
T 1kk8_A 225 VLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADI 262 (837)
T ss_dssp HHHHHHEECCSSCTTEESSEEEEEEEECTTSSEEEEEE
T ss_pred HHHHhcCccCCCCCCCCCceeEEEEEECCCCCEeeeEE
Confidence 56679999999999999999999999999999999997
No 16
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=98.24 E-value=1.5e-07 Score=86.52 Aligned_cols=38 Identities=53% Similarity=0.785 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..+.|.||.+
T Consensus 226 iLEAFGNAkT~rNdNSSRFGK~i~i~F~~~g~i~Ga~I 263 (783)
T 4db1_A 226 ALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADI 263 (783)
T ss_dssp HHHHHHEECCSSCTTEECSEEEEEEEECTTSBEEEEEE
T ss_pred HHHhccCcccCCCCCCCccceeEEEEECCCCCEeeeEE
Confidence 56679999999999999999999999999999999997
No 17
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=98.20 E-value=2.1e-07 Score=85.47 Aligned_cols=38 Identities=61% Similarity=0.769 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..+.|.||.+
T Consensus 221 iLEAFGNAkT~rNdNSSRFGKfi~i~F~~~g~i~Ga~I 258 (770)
T 1w9i_A 221 ILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASI 258 (770)
T ss_dssp HHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhCCCcCCCCCCcCCcceEEEEEECCCCCEeeeEE
Confidence 56679999999999999999999999999999999997
No 18
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=98.19 E-value=2.3e-07 Score=87.46 Aligned_cols=38 Identities=53% Similarity=0.795 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..|.|.||.+
T Consensus 199 iLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i 236 (995)
T 2ycu_A 199 ILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVGANI 236 (995)
T ss_dssp HHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhcCccCCCCCCCCccceEEEEEECCCCCEeeeEE
Confidence 56679999999999999999999999999999999997
No 19
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=98.18 E-value=2.6e-07 Score=87.36 Aligned_cols=39 Identities=54% Similarity=0.865 Sum_probs=36.4
Q ss_pred eeeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 65 TCHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 65 ~ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
+.|.++|+|+|.||+||||||+|++++|+..|.|.||.+
T Consensus 187 piLEAFGNAKT~rNdNSSRFGK~iel~F~~~G~i~Ga~I 225 (1052)
T 4anj_A 187 PLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFV 225 (1052)
T ss_dssp HHHHHHHEECCSSCTTEESSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhccCCCCCCCCCcCCceeEEEEEECCCCCEEEEEE
Confidence 356679999999999999999999999999999999997
No 20
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.17 E-value=2.7e-07 Score=87.11 Aligned_cols=38 Identities=58% Similarity=0.738 Sum_probs=35.9
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.++|+|+|.||+||||||||++++|+..|.|.||.+
T Consensus 221 iLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i 258 (1010)
T 1g8x_A 221 ILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASI 258 (1010)
T ss_dssp HHHHHHEECCSSCTTEECSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhCCCcCCCCCCccccceEEEEEECCCCCCcceEE
Confidence 56679999999999999999999999999999999997
No 21
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=98.15 E-value=2.5e-07 Score=88.62 Aligned_cols=38 Identities=53% Similarity=0.799 Sum_probs=36.0
Q ss_pred eeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 66 CHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 66 ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
.|.+||+|+|.||+||||||+|++++|+..|.|.||.+
T Consensus 229 ileaFGnAkT~rN~NSSRfgk~~~i~f~~~g~i~ga~i 266 (1184)
T 1i84_S 229 ILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANI 266 (1184)
T ss_dssp HHTTTTEEEETTEEEEECSCEEEEEEECSSSCEEEEEE
T ss_pred HHHHhcCCcCCCCccccccceeEEEEECCCCCEeeeEE
Confidence 56679999999999999999999999999999999997
No 22
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=98.13 E-value=2.4e-07 Score=87.95 Aligned_cols=39 Identities=64% Similarity=0.961 Sum_probs=36.4
Q ss_pred eeeeecccccccccCCCCcceeeEEEEecccccccccch
Q psy15660 65 TCHFAIGNAKTIRNDNSSRFGKFTELHFNKHYNIIGASM 103 (178)
Q Consensus 65 ~ylle~~~~~~~rN~nssrf~~~~~~~f~~~~~i~Ga~~ 103 (178)
+.|.+||+|+|.||+||||||+|++++|+..|.|.||.+
T Consensus 201 piLEAFGNAkT~rN~NSSRFGK~i~i~F~~~g~i~Ga~i 239 (1080)
T 2dfs_A 201 PIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANM 239 (1080)
T ss_dssp HHHHHHHEEEETTEEEEECSEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHhcCCcCCCCCCccccceeEEEEECCCCCEeeecc
Confidence 356679999999999999999999999999999999997
No 23
>1bi6_H Bromelain inhibitor VI; cysteine protease inhibitor; NMR {Ananas comosus} SCOP: g.3.12.1 g.3.12.1 PDB: 2bi6_H
Probab=22.01 E-value=32 Score=18.63 Aligned_cols=11 Identities=36% Similarity=0.676 Sum_probs=9.2
Q ss_pred CcceeEEEeec
Q psy15660 43 RFGKFTELHFN 53 (178)
Q Consensus 43 RFGKfi~l~f~ 53 (178)
.|||||-|..-
T Consensus 24 efgkyicldli 34 (41)
T 1bi6_H 24 EFGKYICLDLI 34 (41)
T ss_dssp ETTEEEECEEC
T ss_pred HhCceEEEEec
Confidence 69999988765
Done!