Query psy15662
Match_columns 256
No_of_seqs 198 out of 610
Neff 5.5
Searched_HMMs 46136
Date Fri Aug 16 18:23:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15662.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15662hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2686|consensus 100.0 3.7E-34 8E-39 268.7 10.9 181 1-256 22-202 (366)
2 KOG4720|consensus 100.0 3.3E-30 7.3E-35 237.5 12.0 170 2-256 68-238 (391)
3 PLN02421 phosphotransferase, a 100.0 5.7E-29 1.2E-33 231.2 16.9 143 5-210 1-143 (330)
4 PTZ00296 choline kinase; Provi 100.0 4.4E-29 9.5E-34 241.4 16.6 151 2-210 89-245 (442)
5 PTZ00384 choline kinase; Provi 100.0 6.1E-28 1.3E-32 229.7 17.7 149 2-210 34-187 (383)
6 PLN02236 choline kinase 99.9 3.9E-27 8.6E-32 220.3 16.6 147 2-210 19-166 (344)
7 PF01633 Choline_kinase: Choli 99.8 1.2E-20 2.7E-25 163.3 9.6 98 100-206 2-100 (211)
8 cd05157 ETNK_euk Ethanolamine 99.8 2.9E-19 6.2E-24 155.7 15.1 125 73-210 1-131 (235)
9 cd05156 ChoK_euk Choline Kinas 99.8 2.1E-19 4.6E-24 162.7 13.2 104 98-210 27-135 (302)
10 TIGR02721 ycfN_thiK thiamine k 99.7 4.3E-16 9.4E-21 138.4 13.1 118 76-210 2-120 (256)
11 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 2.9E-16 101.1 12.2 101 74-189 2-104 (170)
12 cd05154 ACAD10_11_like Acyl-Co 98.9 2.7E-08 5.9E-13 84.2 13.9 125 74-210 2-147 (223)
13 TIGR02172 Fb_sc_TIGR02172 Fibr 98.8 2.2E-08 4.7E-13 88.9 10.1 113 76-207 7-129 (226)
14 cd05153 HomoserineK_II Homoser 98.5 8E-07 1.7E-11 80.1 9.2 97 72-188 16-123 (296)
15 cd05150 APH Aminoglycoside 3'- 98.4 4.4E-06 9.5E-11 73.4 11.9 97 76-189 4-107 (244)
16 PF01636 APH: Phosphotransfera 98.2 3.5E-06 7.5E-11 71.2 6.9 101 74-190 1-111 (239)
17 cd05155 APH_ChoK_like_1 Unchar 98.0 2.7E-05 5.9E-10 68.4 9.2 93 79-190 7-109 (235)
18 TIGR00938 thrB_alt homoserine 98.0 2.7E-05 5.8E-10 71.2 9.4 98 72-188 24-132 (307)
19 PLN02876 acyl-CoA dehydrogenas 97.7 0.00082 1.8E-08 70.1 14.4 129 72-209 40-189 (822)
20 PRK05231 homoserine kinase; Pr 97.6 0.00028 6E-09 64.5 9.2 96 73-188 25-131 (319)
21 cd05120 APH_ChoK_like Aminogly 97.4 0.0014 3E-08 50.7 9.6 98 75-188 3-106 (155)
22 COG0510 ycfN Thiamine kinase a 97.2 0.0005 1.1E-08 63.0 5.3 109 75-210 11-121 (269)
23 PRK11768 serine/threonine prot 96.9 0.016 3.6E-07 53.9 12.7 95 78-189 33-137 (325)
24 cd05152 MPH2' Macrolide 2'-Pho 96.8 0.012 2.6E-07 53.8 10.1 100 75-189 16-130 (276)
25 PRK10593 hypothetical protein; 96.6 0.017 3.8E-07 53.2 10.3 99 73-188 17-128 (297)
26 PRK09550 mtnK methylthioribose 96.4 0.032 6.9E-07 54.2 10.7 105 71-186 27-145 (401)
27 COG3173 Predicted aminoglycosi 96.3 0.028 6E-07 53.2 9.5 103 71-188 26-141 (321)
28 PRK06148 hypothetical protein; 95.7 0.068 1.5E-06 57.5 10.3 97 75-187 30-144 (1013)
29 COG2334 Putative homoserine ki 95.5 0.075 1.6E-06 50.4 8.9 95 75-188 31-138 (331)
30 TIGR02906 spore_CotS spore coa 95.5 0.085 1.8E-06 47.5 8.9 83 85-188 11-104 (313)
31 PLN02756 S-methyl-5-thioribose 95.4 0.17 3.6E-06 49.7 11.1 101 71-184 33-148 (418)
32 PRK06149 hypothetical protein; 94.9 0.19 4.1E-06 53.9 10.7 96 75-187 36-148 (972)
33 TIGR03724 arch_bud32 Kae1-asso 94.9 0.15 3.3E-06 42.8 8.2 96 81-189 5-111 (199)
34 PRK12396 5-methylribose kinase 94.9 0.043 9.3E-07 53.6 5.3 67 116-187 74-148 (409)
35 PF03881 Fructosamin_kin: Fruc 94.8 0.17 3.8E-06 46.9 9.0 93 71-186 18-116 (288)
36 PRK10359 lipopolysaccharide co 94.7 0.25 5.5E-06 44.7 9.4 102 74-188 35-155 (232)
37 TIGR02904 spore_ysxE spore coa 94.0 0.33 7.1E-06 44.5 8.8 87 80-189 16-115 (309)
38 TIGR01767 MTRK 5-methylthiorib 93.5 0.11 2.4E-06 50.1 4.9 97 78-186 3-114 (370)
39 PRK01723 3-deoxy-D-manno-octul 93.4 0.54 1.2E-05 42.0 8.9 97 80-189 42-163 (239)
40 COG3642 Mn2+-dependent serine/ 92.9 0.21 4.5E-06 44.5 5.3 62 122-189 48-113 (204)
41 cd06638 STKc_myosinIIIA Cataly 92.1 1.5 3.3E-05 38.2 9.9 100 77-189 25-145 (286)
42 smart00090 RIO RIO-like kinase 91.7 2.5 5.4E-05 37.7 10.9 62 121-188 98-168 (237)
43 PLN00034 mitogen-activated pro 90.4 1.3 2.8E-05 40.7 8.1 101 76-188 80-188 (353)
44 cd05146 RIO3_euk RIO kinase fa 90.2 1 2.3E-05 39.6 6.8 61 122-188 75-145 (197)
45 PLN02421 phosphotransferase, a 89.4 0.28 6E-06 45.9 2.7 23 69-91 13-35 (330)
46 cd00180 PKc Catalytic domain o 89.3 1.2 2.6E-05 35.5 6.1 99 79-189 2-113 (215)
47 cd06917 STKc_NAK1_like Catalyt 89.1 1.7 3.6E-05 37.8 7.3 101 78-189 9-122 (277)
48 cd06608 STKc_myosinIII_like Ca 89.1 1.8 3.9E-05 37.1 7.4 99 78-189 14-134 (275)
49 KOG3087|consensus 88.5 1.6 3.4E-05 39.3 6.6 62 122-189 59-134 (229)
50 cd05119 RIO RIO kinase family, 88.4 6.3 0.00014 32.4 10.1 93 80-186 7-132 (187)
51 PTZ00384 choline kinase; Provi 87.8 0.47 1E-05 45.7 3.2 24 69-92 49-72 (383)
52 cd06639 STKc_myosinIIIB Cataly 87.7 5.6 0.00012 34.9 9.8 105 72-189 23-149 (291)
53 PTZ00296 choline kinase; Provi 87.3 0.45 9.7E-06 46.8 2.8 24 69-92 104-127 (442)
54 COG3001 Uncharacterized protei 86.9 3.5 7.5E-05 38.3 8.1 93 74-189 20-118 (286)
55 cd05157 ETNK_euk Ethanolamine 86.7 0.44 9.6E-06 41.2 2.2 21 22-42 1-21 (235)
56 COG2112 Predicted Ser/Thr prot 86.6 2.4 5.3E-05 37.7 6.6 85 81-181 33-118 (201)
57 cd05144 RIO2_C RIO kinase fami 86.5 7.9 0.00017 32.7 9.7 100 77-188 22-145 (198)
58 PRK10271 thiK thiamine kinase; 86.3 1 2.2E-05 39.6 4.2 50 148-210 2-51 (188)
59 PRK09188 serine/threonine prot 85.6 4.2 9.2E-05 39.1 8.4 101 78-188 26-131 (365)
60 cd06640 STKc_MST4 Catalytic do 85.0 2 4.3E-05 37.6 5.5 101 77-189 11-122 (277)
61 cd05145 RIO1_like RIO kinase f 84.9 10 0.00022 32.0 9.7 60 121-186 67-135 (190)
62 PRK14879 serine/threonine prot 84.8 4.9 0.00011 33.8 7.6 98 79-189 5-116 (211)
63 PLN02236 choline kinase 84.7 0.68 1.5E-05 43.6 2.5 23 69-91 35-57 (344)
64 PF04655 APH_6_hur: Aminoglyco 84.4 5.3 0.00011 36.5 8.1 111 78-209 10-127 (253)
65 cd07831 STKc_MOK Catalytic dom 83.6 5.5 0.00012 34.5 7.6 101 78-189 7-121 (282)
66 cd05046 PTK_CCK4 Pseudokinase 83.5 5.1 0.00011 34.7 7.3 105 78-189 13-138 (275)
67 cd05591 STKc_nPKC_epsilon Cata 82.8 3.6 7.8E-05 37.2 6.3 98 81-189 6-117 (321)
68 cd06621 PKc_MAPKK_Pek1_like Ca 82.6 10 0.00022 33.4 9.0 101 77-189 8-126 (287)
69 cd05034 PTKc_Src_like Catalyti 82.6 6 0.00013 33.9 7.4 97 78-189 14-124 (261)
70 cd05122 PKc_STE Catalytic doma 82.5 5.9 0.00013 33.0 7.2 99 78-189 8-119 (253)
71 cd06613 STKc_MAP4K3_like Catal 82.2 4.6 0.0001 34.4 6.5 100 77-189 10-122 (262)
72 cd08219 STKc_Nek3 Catalytic do 82.1 12 0.00026 32.0 9.0 101 77-189 7-121 (255)
73 PF06293 Kdo: Lipopolysacchari 82.0 2.1 4.6E-05 37.1 4.4 64 121-189 59-139 (206)
74 cd05038 PTKc_Jak_rpt2 Catalyti 81.1 7.3 0.00016 33.6 7.4 105 77-189 11-130 (284)
75 cd05611 STKc_Rim15_like Cataly 80.8 4.4 9.5E-05 34.8 5.9 98 81-189 7-118 (260)
76 PRK12274 serine/threonine prot 80.6 3.3 7.1E-05 37.3 5.1 83 99-189 24-112 (218)
77 cd05147 RIO1_euk RIO kinase fa 80.5 21 0.00047 30.4 10.0 61 122-188 68-138 (190)
78 cd05587 STKc_cPKC Catalytic do 80.4 5.2 0.00011 36.2 6.5 102 77-189 7-122 (324)
79 cd05570 STKc_PKC Catalytic dom 80.1 3.7 8E-05 37.1 5.4 95 84-189 9-117 (318)
80 cd06623 PKc_MAPKK_plant_like C 80.1 8.7 0.00019 32.7 7.5 96 81-188 12-120 (264)
81 cd06609 STKc_MST3_like Catalyt 79.7 5.6 0.00012 34.5 6.3 100 78-189 9-119 (274)
82 cd05156 ChoK_euk Choline Kinas 79.1 1.4 3E-05 39.8 2.3 19 74-92 2-20 (302)
83 cd06626 STKc_MEKK4 Catalytic d 79.1 8.8 0.00019 32.7 7.2 100 78-189 8-120 (264)
84 PRK15123 lipopolysaccharide co 78.9 9.8 0.00021 34.9 7.8 63 121-189 76-159 (268)
85 cd05620 STKc_nPKC_delta Cataly 78.8 5.9 0.00013 35.8 6.3 99 80-189 5-117 (316)
86 cd06637 STKc_TNIK Catalytic do 78.6 11 0.00024 32.4 7.7 99 78-189 14-132 (272)
87 cd06611 STKc_SLK_like Catalyti 78.3 5.7 0.00012 34.6 5.9 99 78-189 13-124 (280)
88 cd07870 STKc_PFTAIRE2 Catalyti 78.1 11 0.00023 33.1 7.6 101 77-189 12-124 (291)
89 PHA03390 pk1 serine/threonine- 78.0 14 0.00031 32.2 8.4 95 78-189 24-130 (267)
90 cd06655 STKc_PAK2 Catalytic do 77.9 10 0.00023 33.7 7.6 100 77-189 26-136 (296)
91 cd07836 STKc_Pho85 Catalytic d 77.8 11 0.00024 32.6 7.6 101 76-188 6-120 (284)
92 cd05052 PTKc_Abl Catalytic dom 77.5 11 0.00024 32.5 7.4 102 73-188 8-124 (263)
93 cd05055 PTKc_PDGFR Catalytic d 77.3 9 0.0002 34.2 7.0 112 71-188 35-161 (302)
94 cd06636 STKc_MAP4K4_6 Catalyti 77.3 12 0.00025 32.6 7.6 100 77-189 23-142 (282)
95 cd05088 PTKc_Tie2 Catalytic do 77.2 14 0.0003 32.9 8.2 103 78-189 15-145 (303)
96 cd05590 STKc_nPKC_eta Catalyti 76.7 5.5 0.00012 36.1 5.5 99 80-189 5-117 (320)
97 cd05084 PTKc_Fes Catalytic dom 76.6 17 0.00036 31.0 8.2 97 81-189 6-115 (252)
98 cd05588 STKc_aPKC Catalytic do 76.5 8 0.00017 35.2 6.5 98 81-189 6-117 (329)
99 cd06632 STKc_MEKK1_plant Catal 76.1 9.3 0.0002 32.4 6.5 97 81-189 11-123 (258)
100 cd07837 STKc_CdkB_plant Cataly 76.0 9.5 0.0002 33.4 6.7 102 77-189 8-131 (295)
101 cd06619 PKc_MKK5 Catalytic dom 75.4 11 0.00023 33.1 6.8 101 77-189 8-116 (279)
102 cd05067 PTKc_Lck_Blk Catalytic 74.4 15 0.00033 31.4 7.5 98 77-189 13-123 (260)
103 cd07840 STKc_CDK9_like Catalyt 74.4 14 0.0003 31.8 7.2 100 77-189 6-121 (287)
104 cd06625 STKc_MEKK3_like Cataly 74.4 14 0.0003 31.6 7.1 98 80-189 12-125 (263)
105 cd05071 PTKc_Src Catalytic dom 74.3 15 0.00033 31.7 7.5 97 78-189 14-123 (262)
106 COG1718 RIO1 Serine/threonine 74.2 12 0.00026 34.8 7.0 55 99-153 71-149 (268)
107 cd05068 PTKc_Frk_like Catalyti 74.0 15 0.00032 31.6 7.3 97 77-188 13-123 (261)
108 cd06644 STKc_STK10_LOK Catalyt 73.9 9.5 0.00021 33.5 6.1 100 77-189 19-131 (292)
109 cd05615 STKc_cPKC_alpha Cataly 73.6 8.8 0.00019 34.8 6.0 101 77-188 7-121 (323)
110 cd05069 PTKc_Yes Catalytic dom 73.2 14 0.0003 31.8 6.9 94 81-189 17-123 (260)
111 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 72.8 14 0.00031 32.1 7.0 104 77-189 11-129 (284)
112 cd05600 STKc_Sid2p_Dbf2p Catal 72.4 8 0.00017 35.0 5.4 102 76-189 7-122 (333)
113 cd05101 PTKc_FGFR2 Catalytic d 72.1 15 0.00032 32.6 7.0 107 77-189 22-158 (304)
114 cd06656 STKc_PAK3 Catalytic do 72.0 16 0.00035 32.4 7.2 100 77-189 26-136 (297)
115 cd05059 PTKc_Tec_like Catalyti 71.6 20 0.00043 30.7 7.5 97 78-189 12-121 (256)
116 cd06605 PKc_MAPKK Catalytic do 71.5 6.2 0.00013 33.8 4.3 97 78-186 9-118 (265)
117 cd06612 STKc_MST1_2 Catalytic 71.5 14 0.0003 31.3 6.5 94 81-189 14-120 (256)
118 cd05579 STKc_MAST_like Catalyt 71.5 6.7 0.00014 33.2 4.4 97 81-189 4-114 (265)
119 cd07844 STKc_PCTAIRE_like Cata 71.3 40 0.00087 29.4 9.5 100 77-189 12-124 (291)
120 PHA02988 hypothetical protein; 71.3 15 0.00032 32.6 6.8 97 77-187 27-141 (283)
121 cd06642 STKc_STK25-YSK1 Cataly 71.3 16 0.00034 31.8 6.9 98 80-189 14-122 (277)
122 cd06627 STKc_Cdc7_like Catalyt 71.3 18 0.00039 30.4 7.0 101 77-189 7-120 (254)
123 cd05619 STKc_nPKC_theta Cataly 71.2 12 0.00025 34.0 6.2 98 81-189 6-117 (316)
124 cd05073 PTKc_Hck Catalytic dom 71.1 58 0.0012 27.9 10.3 94 81-189 17-123 (260)
125 cd05613 STKc_MSK1_N N-terminal 71.1 17 0.00037 31.8 7.1 104 78-189 8-126 (290)
126 cd05049 PTKc_Trk Catalytic dom 71.1 12 0.00027 32.3 6.1 103 80-189 15-143 (280)
127 cd05583 STKc_MSK_N N-terminal 71.0 20 0.00044 31.3 7.5 103 78-188 8-125 (288)
128 cd05617 STKc_aPKC_zeta Catalyt 71.0 11 0.00023 34.3 5.9 98 81-189 6-117 (327)
129 cd05037 PTK_Jak_rpt1 Pseudokin 70.9 12 0.00026 31.8 5.9 101 80-189 5-122 (259)
130 cd06654 STKc_PAK1 Catalytic do 70.5 16 0.00035 32.4 6.9 100 77-189 27-137 (296)
131 cd05093 PTKc_TrkB Catalytic do 70.5 14 0.00031 32.4 6.5 103 79-189 14-141 (288)
132 cd05070 PTKc_Fyn_Yrk Catalytic 70.4 12 0.00025 32.2 5.8 94 81-189 17-123 (260)
133 cd05114 PTKc_Tec_Rlk Catalytic 70.4 39 0.00085 28.8 9.1 98 77-189 11-121 (256)
134 cd05581 STKc_PDK1 Catalytic do 70.3 8 0.00017 33.2 4.7 101 78-189 9-123 (280)
135 cd06657 STKc_PAK4 Catalytic do 70.1 12 0.00026 33.3 6.0 100 77-189 27-137 (292)
136 cd06610 STKc_OSR1_SPAK Catalyt 70.0 19 0.00041 30.6 7.0 100 78-189 9-123 (267)
137 cd05053 PTKc_FGFR Catalytic do 69.9 63 0.0014 28.1 10.5 105 78-188 20-152 (293)
138 cd07838 STKc_CDK4_6_like Catal 69.7 53 0.0012 28.2 9.8 101 77-189 6-128 (287)
139 cd05608 STKc_GRK1 Catalytic do 69.5 29 0.00063 30.4 8.2 97 81-189 4-118 (280)
140 cd07833 STKc_CDKL Catalytic do 69.5 11 0.00024 32.6 5.5 97 81-189 12-121 (288)
141 cd06624 STKc_ASK Catalytic dom 68.7 12 0.00025 32.4 5.4 99 78-189 16-129 (268)
142 cd06629 STKc_MAPKKK_Bck1_like 68.6 20 0.00043 30.9 6.9 101 77-189 8-129 (272)
143 cd07848 STKc_CDKL5 Catalytic d 68.4 16 0.00036 31.8 6.4 100 78-189 9-121 (287)
144 cd05614 STKc_MSK2_N N-terminal 68.2 24 0.00052 31.8 7.6 104 78-189 8-126 (332)
145 cd05632 STKc_GRK5 Catalytic do 68.1 29 0.00062 30.5 7.9 101 77-189 7-123 (285)
146 cd05094 PTKc_TrkC Catalytic do 67.9 20 0.00043 31.5 6.9 104 78-189 13-144 (291)
147 cd07861 STKc_CDK1_euk Catalyti 67.7 33 0.00071 29.7 8.1 102 76-189 6-122 (285)
148 cd07873 STKc_PCTAIRE1 Catalyti 67.6 37 0.00079 30.0 8.5 101 77-189 13-125 (301)
149 PLN00009 cyclin-dependent kina 67.2 24 0.00053 30.9 7.3 101 77-189 9-123 (294)
150 cd06651 STKc_MEKK3 Catalytic d 67.2 22 0.00048 30.6 6.9 100 78-189 10-127 (266)
151 cd05079 PTKc_Jak1_rpt2 Catalyt 67.1 25 0.00055 30.7 7.3 104 78-189 12-130 (284)
152 cd07869 STKc_PFTAIRE1 Catalyti 67.0 27 0.00059 30.9 7.6 100 77-188 12-123 (303)
153 cd05592 STKc_nPKC_theta_delta 66.9 17 0.00036 32.9 6.3 98 81-189 6-117 (316)
154 cd05098 PTKc_FGFR1 Catalytic d 66.9 54 0.0012 29.1 9.5 84 100-189 50-161 (307)
155 cd05589 STKc_PKN Catalytic dom 66.8 18 0.00039 32.6 6.5 102 77-189 6-122 (324)
156 cd05104 PTKc_Kit Catalytic dom 66.7 20 0.00044 33.4 7.0 77 77-153 42-122 (375)
157 PF01163 RIO1: RIO1 family; I 66.7 4.5 9.8E-05 35.2 2.4 63 122-188 57-127 (188)
158 cd06643 STKc_SLK Catalytic dom 66.6 22 0.00047 31.0 6.8 99 78-189 13-124 (282)
159 cd07871 STKc_PCTAIRE3 Catalyti 66.6 26 0.00057 30.8 7.4 102 76-189 11-124 (288)
160 cd05618 STKc_aPKC_iota Catalyt 66.5 16 0.00034 33.3 6.0 98 81-189 6-117 (329)
161 cd05580 STKc_PKA Catalytic dom 66.3 23 0.0005 31.1 6.9 99 78-188 9-121 (290)
162 smart00219 TyrKc Tyrosine kina 65.7 33 0.00072 28.8 7.6 105 77-189 6-124 (258)
163 cd05061 PTKc_InsR Catalytic do 65.6 26 0.00057 30.7 7.2 107 76-189 12-140 (288)
164 cd05087 PTKc_Aatyk1_Aatyk3 Cat 65.4 28 0.0006 30.1 7.2 98 81-188 6-120 (269)
165 cd07846 STKc_CDKL2_3 Catalytic 65.3 16 0.00034 31.7 5.6 102 76-189 7-121 (286)
166 cd07864 STKc_CDK12 Catalytic d 65.0 27 0.00058 30.6 7.1 100 78-189 15-137 (302)
167 cd05616 STKc_cPKC_beta Catalyt 64.9 22 0.00047 32.1 6.6 100 78-188 8-121 (323)
168 cd05574 STKc_phototropin_like 64.1 29 0.00062 30.8 7.2 100 78-189 9-124 (316)
169 cd06628 STKc_MAPKKK_Byr2_like 63.9 45 0.00097 28.5 8.1 100 78-189 8-127 (267)
170 cd06606 STKc_MAPKKK Catalytic 63.6 31 0.00068 28.7 7.0 100 78-189 8-122 (260)
171 cd05085 PTKc_Fer Catalytic dom 63.4 26 0.00057 29.6 6.5 95 81-188 6-113 (250)
172 PF07714 Pkinase_Tyr: Protein 63.3 18 0.0004 31.4 5.7 98 84-189 13-124 (259)
173 cd05102 PTKc_VEGFR3 Catalytic 63.3 41 0.00088 30.3 8.1 77 77-153 14-95 (338)
174 PRK09902 hypothetical protein; 63.2 18 0.00038 32.6 5.5 65 120-189 66-149 (216)
175 cd05572 STKc_cGK_PKG Catalytic 62.8 21 0.00046 30.5 5.9 94 84-189 7-114 (262)
176 cd08225 STKc_Nek5 Catalytic do 62.6 25 0.00055 29.7 6.3 100 78-189 8-122 (257)
177 cd05089 PTKc_Tie1 Catalytic do 62.5 39 0.00084 29.9 7.7 102 78-188 10-139 (297)
178 cd07847 STKc_CDKL1_4 Catalytic 62.1 30 0.00065 29.9 6.8 101 77-189 8-121 (286)
179 cd05578 STKc_Yank1 Catalytic d 61.9 18 0.00039 30.9 5.3 101 77-189 7-121 (258)
180 cd05060 PTKc_Syk_like Catalyti 61.5 31 0.00068 29.5 6.7 100 81-189 6-116 (257)
181 cd05626 STKc_LATS2 Catalytic d 61.4 27 0.00058 32.5 6.7 103 75-189 6-122 (381)
182 cd05066 PTKc_EphR_A Catalytic 61.4 32 0.0007 29.6 6.8 103 78-189 12-127 (267)
183 cd06641 STKc_MST3 Catalytic do 61.2 41 0.00089 29.2 7.5 101 77-189 11-122 (277)
184 cd05599 STKc_NDR_like Catalyti 61.0 21 0.00046 32.6 5.9 102 76-189 7-122 (364)
185 cd05096 PTKc_DDR1 Catalytic do 61.0 73 0.0016 28.1 9.2 105 78-189 13-159 (304)
186 cd06648 STKc_PAK_II Catalytic 61.0 35 0.00075 30.0 7.1 102 75-189 24-136 (285)
187 cd05036 PTKc_ALK_LTK Catalytic 61.0 31 0.00068 30.0 6.7 105 77-188 13-136 (277)
188 cd06646 STKc_MAP4K5 Catalytic 60.6 34 0.00074 29.3 6.8 99 78-189 17-127 (267)
189 cd07835 STKc_CDK1_like Catalyt 60.5 28 0.0006 30.2 6.3 100 77-189 6-120 (283)
190 cd05577 STKc_GRK Catalytic dom 60.1 29 0.00064 30.1 6.4 94 84-189 7-116 (277)
191 cd05092 PTKc_TrkA Catalytic do 60.1 33 0.00071 30.0 6.7 103 78-188 13-142 (280)
192 cd05115 PTKc_Zap-70 Catalytic 59.8 68 0.0015 27.6 8.6 98 81-188 6-115 (257)
193 cd05062 PTKc_IGF-1R Catalytic 59.8 33 0.00071 29.8 6.6 82 100-188 36-139 (277)
194 cd05072 PTKc_Lyn Catalytic dom 59.8 73 0.0016 27.2 8.7 98 77-189 13-124 (261)
195 cd06614 STKc_PAK Catalytic dom 59.4 37 0.00081 29.5 7.0 98 78-189 27-137 (286)
196 cd05109 PTKc_HER2 Catalytic do 59.3 44 0.00096 29.0 7.4 105 77-189 14-130 (279)
197 cd05631 STKc_GRK4 Catalytic do 59.0 36 0.00077 29.9 6.8 101 76-188 6-122 (285)
198 cd06615 PKc_MEK Catalytic doma 58.9 39 0.00085 30.1 7.1 94 81-186 12-117 (308)
199 cd06658 STKc_PAK5 Catalytic do 58.8 14 0.0003 32.8 4.2 101 76-189 28-139 (292)
200 cd07860 STKc_CDK2_3 Catalytic 58.6 47 0.001 28.7 7.4 101 76-188 6-120 (284)
201 cd05118 STKc_CMGC Catalytic do 58.5 29 0.00062 29.9 6.0 101 77-189 6-119 (283)
202 cd08529 STKc_FA2-like Catalyti 58.4 30 0.00065 29.2 6.0 100 78-189 8-122 (256)
203 KOG1989|consensus 58.3 33 0.00071 36.3 7.2 110 72-192 38-168 (738)
204 cd05099 PTKc_FGFR4 Catalytic d 57.9 41 0.00089 30.0 7.1 83 100-188 44-154 (314)
205 cd05047 PTKc_Tie Catalytic dom 57.8 43 0.00093 29.0 7.0 100 80-188 5-132 (270)
206 cd05065 PTKc_EphR_B Catalytic 57.5 92 0.002 26.7 9.0 103 78-189 12-127 (269)
207 cd07832 STKc_CCRK Catalytic do 57.5 17 0.00036 31.5 4.3 100 77-188 7-119 (286)
208 cd00192 PTKc Catalytic domain 57.4 44 0.00096 28.0 6.9 98 83-189 8-126 (262)
209 cd08220 STKc_Nek8 Catalytic do 57.3 40 0.00086 28.5 6.6 100 78-189 8-122 (256)
210 PRK09605 bifunctional UGMP fam 57.1 30 0.00066 34.3 6.6 63 121-189 384-449 (535)
211 cd05108 PTKc_EGFR Catalytic do 57.0 43 0.00092 29.9 7.0 104 78-189 15-130 (316)
212 cd08217 STKc_Nek2 Catalytic do 56.7 48 0.001 27.9 7.0 97 77-185 7-122 (265)
213 cd06618 PKc_MKK7 Catalytic dom 56.6 29 0.00062 30.6 5.8 99 77-186 22-132 (296)
214 cd05041 PTKc_Fes_like Catalyti 56.6 69 0.0015 27.0 8.0 96 81-189 6-114 (251)
215 cd07842 STKc_CDK8_like Catalyt 56.4 72 0.0016 28.0 8.3 102 78-189 8-129 (316)
216 cd05095 PTKc_DDR2 Catalytic do 56.3 67 0.0014 28.2 8.1 106 77-189 12-151 (296)
217 PF07914 DUF1679: Protein of u 56.2 32 0.00069 33.6 6.4 65 122-191 115-191 (414)
218 cd08228 STKc_Nek6 Catalytic do 56.1 38 0.00083 28.9 6.4 100 78-189 10-127 (267)
219 cd06630 STKc_MEKK1 Catalytic d 56.0 51 0.0011 28.1 7.1 99 79-189 9-124 (268)
220 cd05151 ChoK Choline Kinase (C 56.0 7.4 0.00016 31.3 1.7 20 22-41 1-20 (170)
221 cd05609 STKc_MAST Catalytic do 56.0 43 0.00093 29.7 6.8 101 77-189 8-122 (305)
222 cd05629 STKc_NDR_like_fungal C 55.8 39 0.00084 31.2 6.7 102 76-189 7-122 (377)
223 smart00221 STYKc Protein kinas 55.7 63 0.0014 26.3 7.4 99 78-189 7-119 (225)
224 KOG1187|consensus 55.3 64 0.0014 30.7 8.2 95 81-189 86-195 (361)
225 cd05612 STKc_PRKX_like Catalyt 54.9 19 0.00042 31.8 4.4 101 77-189 8-122 (291)
226 cd05593 STKc_PKB_gamma Catalyt 54.9 38 0.00082 30.8 6.4 97 81-189 6-116 (328)
227 cd08224 STKc_Nek6_Nek7 Catalyt 54.8 42 0.00092 28.5 6.4 100 78-189 10-127 (267)
228 cd05603 STKc_SGK2 Catalytic do 54.7 35 0.00075 30.7 6.1 98 80-189 5-117 (321)
229 cd05082 PTKc_Csk Catalytic dom 54.7 49 0.0011 28.2 6.8 94 78-188 14-122 (256)
230 cd05100 PTKc_FGFR3 Catalytic d 54.5 46 0.00099 30.1 6.9 82 101-188 45-154 (334)
231 smart00220 S_TKc Serine/Threon 54.3 22 0.00047 29.2 4.3 92 85-189 4-108 (244)
232 cd05039 PTKc_Csk_like Catalyti 54.1 45 0.00098 28.4 6.4 96 78-189 14-123 (256)
233 cd05597 STKc_DMPK_like Catalyt 53.9 49 0.0011 30.0 7.0 101 77-189 8-123 (331)
234 cd08215 STKc_Nek Catalytic dom 53.9 49 0.0011 27.7 6.5 100 78-189 8-124 (258)
235 cd05032 PTKc_InsR_like Catalyt 53.7 54 0.0012 28.2 6.9 102 81-189 17-140 (277)
236 PTZ00267 NIMA-related protein 53.7 38 0.00082 33.0 6.5 96 81-188 78-189 (478)
237 cd06647 STKc_PAK_I Catalytic d 53.4 40 0.00087 29.8 6.2 100 77-189 26-136 (293)
238 cd05045 PTKc_RET Catalytic dom 53.4 47 0.001 29.0 6.6 105 78-189 8-148 (290)
239 cd06653 STKc_MEKK3_like_1 Cata 53.1 60 0.0013 27.9 7.1 100 78-189 10-127 (264)
240 cd05598 STKc_LATS Catalytic do 53.0 58 0.0013 30.0 7.4 102 76-189 7-122 (376)
241 cd06649 PKc_MEK2 Catalytic dom 52.8 46 0.001 30.1 6.6 99 77-187 12-122 (331)
242 PF01636 APH: Phosphotransfera 52.7 11 0.00024 31.3 2.3 20 23-42 1-20 (239)
243 cd05605 STKc_GRK4_like Catalyt 52.6 1.1E+02 0.0024 26.8 8.8 101 77-189 7-123 (285)
244 cd06633 STKc_TAO3 Catalytic do 52.5 41 0.00088 30.2 6.2 102 76-189 27-142 (313)
245 cd05105 PTKc_PDGFR_alpha Catal 52.2 66 0.0014 30.7 7.8 83 71-153 37-124 (400)
246 cd06617 PKc_MKK3_6 Catalytic d 52.2 1.3E+02 0.0029 25.8 9.2 100 77-187 8-122 (283)
247 cd07872 STKc_PCTAIRE2 Catalyti 51.9 64 0.0014 28.6 7.3 101 77-189 13-125 (309)
248 cd07866 STKc_BUR1 Catalytic do 51.7 85 0.0018 27.4 7.9 107 71-189 8-136 (311)
249 cd08229 STKc_Nek7 Catalytic do 51.7 26 0.00057 30.0 4.6 97 80-188 12-126 (267)
250 PTZ00263 protein kinase A cata 51.5 61 0.0013 29.4 7.2 107 71-189 18-139 (329)
251 cd05627 STKc_NDR2 Catalytic do 51.5 49 0.0011 30.4 6.6 102 76-189 7-122 (360)
252 cd07845 STKc_CDK10 Catalytic d 51.3 92 0.002 27.5 8.2 100 78-189 15-129 (309)
253 cd05090 PTKc_Ror1 Catalytic do 50.8 89 0.0019 27.1 7.9 104 78-189 13-145 (283)
254 cd05575 STKc_SGK Catalytic dom 50.4 47 0.001 29.9 6.2 97 81-189 6-117 (323)
255 cd07856 STKc_Sty1_Hog1 Catalyt 50.3 89 0.0019 28.3 8.1 100 77-189 17-129 (328)
256 cd05586 STKc_Sck1_like Catalyt 50.3 47 0.001 29.9 6.2 95 84-189 7-117 (330)
257 cd06652 STKc_MEKK2 Catalytic d 50.2 63 0.0014 27.7 6.8 98 80-189 12-127 (265)
258 cd05585 STKc_YPK1_like Catalyt 49.9 40 0.00087 30.2 5.7 95 83-189 6-114 (312)
259 cd05628 STKc_NDR1 Catalytic do 49.8 54 0.0012 30.2 6.6 101 77-189 8-122 (363)
260 PF12260 PIP49_C: Protein-kina 49.7 52 0.0011 28.4 6.1 33 121-153 7-39 (188)
261 cd05103 PTKc_VEGFR2 Catalytic 49.6 41 0.0009 30.7 5.8 76 78-153 15-95 (343)
262 cd06650 PKc_MEK1 Catalytic dom 49.5 62 0.0013 29.5 6.9 97 78-186 13-121 (333)
263 cd07841 STKc_CDK7 Catalytic do 49.3 25 0.00054 30.8 4.2 101 77-189 7-123 (298)
264 cd05050 PTKc_Musk Catalytic do 49.3 55 0.0012 28.5 6.3 103 79-188 14-150 (288)
265 cd07854 STKc_MAPK4_6 Catalytic 49.1 61 0.0013 29.5 6.8 100 77-189 12-135 (342)
266 cd05123 STKc_AGC Catalytic dom 48.9 33 0.00071 28.9 4.7 93 85-189 8-114 (250)
267 cd05573 STKc_ROCK_NDR_like Cat 48.4 39 0.00085 30.5 5.4 101 77-189 8-122 (350)
268 cd07852 STKc_MAPK15 Catalytic 48.3 78 0.0017 28.5 7.4 94 84-189 21-128 (337)
269 cd05625 STKc_LATS1 Catalytic d 48.3 62 0.0013 29.9 6.8 103 75-189 6-122 (382)
270 cd05042 PTKc_Aatyk Catalytic d 48.1 64 0.0014 27.7 6.5 100 80-189 5-121 (269)
271 cd05056 PTKc_FAK Catalytic dom 48.1 1.2E+02 0.0026 26.0 8.2 102 78-188 14-127 (270)
272 cd07830 STKc_MAK_like Catalyti 47.9 29 0.00063 30.0 4.3 99 80-189 9-120 (283)
273 cd08223 STKc_Nek4 Catalytic do 47.8 52 0.0011 27.9 5.8 100 78-189 8-123 (257)
274 cd07839 STKc_CDK5 Catalytic do 47.8 64 0.0014 27.9 6.5 101 77-189 7-120 (284)
275 cd06645 STKc_MAP4K3 Catalytic 47.8 49 0.0011 28.3 5.7 97 79-188 18-126 (267)
276 cd05064 PTKc_EphR_A10 Catalyti 47.7 1.4E+02 0.0031 25.7 8.6 102 78-188 13-127 (266)
277 cd05607 STKc_GRK7 Catalytic do 47.6 62 0.0013 28.3 6.4 94 84-189 7-116 (277)
278 cd05051 PTKc_DDR Catalytic dom 47.6 70 0.0015 27.8 6.7 83 100-189 46-151 (296)
279 cd06659 STKc_PAK6 Catalytic do 47.5 40 0.00086 30.0 5.2 100 77-189 28-138 (297)
280 cd05033 PTKc_EphR Catalytic do 47.2 1.1E+02 0.0024 26.1 7.9 103 78-189 12-127 (266)
281 cd05113 PTKc_Btk_Bmx Catalytic 47.1 1.4E+02 0.003 25.6 8.4 97 78-189 12-121 (256)
282 cd06620 PKc_MAPKK_Byr1_like Ca 47.0 76 0.0016 27.6 6.9 97 78-186 13-121 (284)
283 cd08221 STKc_Nek9 Catalytic do 46.9 70 0.0015 27.1 6.5 97 81-189 11-122 (256)
284 cd05048 PTKc_Ror Catalytic Dom 46.8 59 0.0013 28.1 6.1 103 80-189 15-145 (283)
285 cd05601 STKc_CRIK Catalytic do 46.7 67 0.0015 28.9 6.6 101 77-189 8-123 (330)
286 cd05148 PTKc_Srm_Brk Catalytic 46.5 56 0.0012 27.8 5.8 97 78-188 14-124 (261)
287 cd05107 PTKc_PDGFR_beta Cataly 46.0 66 0.0014 30.8 6.8 85 69-153 35-124 (401)
288 cd05057 PTKc_EGFR_like Catalyt 46.0 90 0.002 27.0 7.2 104 77-188 14-129 (279)
289 cd06607 STKc_TAO Catalytic dom 45.8 29 0.00063 30.8 4.1 101 77-189 22-136 (307)
290 cd05633 STKc_GRK3 Catalytic do 45.7 94 0.002 27.2 7.3 98 81-189 5-118 (279)
291 cd05080 PTKc_Tyk2_rpt2 Catalyt 45.6 94 0.002 26.9 7.2 103 78-188 12-127 (283)
292 KOG2270|consensus 44.9 1.1E+02 0.0025 30.6 8.1 59 122-184 215-280 (520)
293 cd07867 STKc_CDC2L6 Catalytic 44.8 1.3E+02 0.0029 26.4 8.2 98 78-188 9-128 (317)
294 cd05097 PTKc_DDR_like Catalyti 44.4 54 0.0012 28.8 5.5 84 99-189 43-150 (295)
295 cd05630 STKc_GRK6 Catalytic do 44.3 1.1E+02 0.0023 27.0 7.4 100 78-189 8-123 (285)
296 cd05083 PTKc_Chk Catalytic dom 44.3 78 0.0017 26.9 6.4 92 81-189 17-121 (254)
297 cd05106 PTKc_CSF-1R Catalytic 44.2 50 0.0011 30.8 5.5 82 72-153 39-125 (374)
298 cd05596 STKc_ROCK Catalytic do 44.1 1E+02 0.0022 28.7 7.5 108 70-189 42-163 (370)
299 cd05571 STKc_PKB Catalytic dom 44.0 71 0.0015 28.8 6.4 97 81-189 6-116 (323)
300 PF00069 Pkinase: Protein kina 43.6 44 0.00095 28.2 4.7 99 77-189 6-119 (260)
301 cd05595 STKc_PKB_beta Catalyti 43.6 66 0.0014 29.0 6.1 97 81-189 6-116 (323)
302 cd07855 STKc_ERK5 Catalytic do 43.6 69 0.0015 28.9 6.2 100 78-189 13-128 (334)
303 TIGR02905 spore_yutH spore coa 43.1 81 0.0018 29.1 6.7 78 100-189 28-110 (313)
304 cd05604 STKc_SGK3 Catalytic do 43.0 74 0.0016 28.6 6.3 97 81-189 6-117 (325)
305 cd05110 PTKc_HER4 Catalytic do 42.8 42 0.00091 29.8 4.6 105 77-189 14-130 (303)
306 PF06176 WaaY: Lipopolysacchar 42.8 28 0.00062 31.6 3.5 37 146-188 119-155 (229)
307 cd08218 STKc_Nek1 Catalytic do 42.8 1.2E+02 0.0025 25.7 7.2 100 78-189 8-122 (256)
308 cd05582 STKc_RSK_N N-terminal 42.0 62 0.0014 29.0 5.6 98 83-189 9-119 (318)
309 cd07850 STKc_JNK Catalytic dom 41.8 1.2E+02 0.0026 27.6 7.6 101 77-189 23-139 (353)
310 TIGR02721 ycfN_thiK thiamine k 41.0 11 0.00025 33.1 0.7 17 24-40 1-17 (256)
311 PTZ00426 cAMP-dependent protei 40.8 88 0.0019 28.7 6.6 109 70-189 29-152 (340)
312 cd05606 STKc_beta_ARK Catalyti 40.0 96 0.0021 27.1 6.4 96 82-188 6-117 (278)
313 PHA03207 serine/threonine kina 40.0 1.3E+02 0.0028 28.2 7.6 97 77-189 99-206 (392)
314 PF02958 EcKinase: Ecdysteroid 40.0 2E+02 0.0043 25.6 8.6 107 82-188 5-131 (294)
315 cd05116 PTKc_Syk Catalytic dom 39.8 1.9E+02 0.0041 24.6 8.2 97 83-189 8-116 (257)
316 cd05040 PTKc_Ack_like Catalyti 39.8 1.6E+02 0.0034 24.9 7.6 102 79-189 4-118 (257)
317 cd05063 PTKc_EphR_A2 Catalytic 39.8 2.4E+02 0.0051 24.0 8.9 102 78-188 13-127 (268)
318 PTZ00024 cyclin-dependent prot 39.8 1.3E+02 0.0029 26.9 7.5 99 78-189 17-140 (335)
319 cd05112 PTKc_Itk Catalytic dom 39.7 2.3E+02 0.005 23.9 9.0 96 78-188 12-120 (256)
320 cd05584 STKc_p70S6K Catalytic 39.4 51 0.0011 29.7 4.7 101 80-189 6-121 (323)
321 cd07849 STKc_ERK1_2_like Catal 39.2 94 0.002 28.1 6.4 100 78-189 13-127 (336)
322 cd07865 STKc_CDK9 Catalytic do 39.1 1.6E+02 0.0035 25.6 7.7 99 78-188 20-139 (310)
323 TIGR02457 TreS_Cterm trehalose 38.9 48 0.001 33.6 4.8 97 73-186 168-299 (528)
324 cd08530 STKc_CNK2-like Catalyt 38.8 68 0.0015 27.0 5.1 100 78-189 8-124 (256)
325 cd06616 PKc_MKK4 Catalytic dom 38.6 1.3E+02 0.0028 26.1 7.0 97 79-186 13-125 (288)
326 cd07863 STKc_CDK4 Catalytic do 37.9 2.1E+02 0.0045 24.7 8.2 100 78-188 8-128 (288)
327 cd05622 STKc_ROCK1 Catalytic d 37.2 1.1E+02 0.0023 28.6 6.6 110 68-189 40-163 (371)
328 cd06635 STKc_TAO1 Catalytic do 37.1 1.2E+02 0.0025 27.2 6.6 100 77-188 32-145 (317)
329 cd06622 PKc_MAPKK_PBS2_like Ca 36.9 45 0.00097 29.0 3.8 97 78-186 9-120 (286)
330 cd07862 STKc_CDK6 Catalytic do 36.8 2.6E+02 0.0056 24.2 8.6 103 77-189 8-131 (290)
331 PLN00113 leucine-rich repeat r 36.7 1.2E+02 0.0027 31.9 7.6 92 78-186 698-798 (968)
332 cd07868 STKc_CDK8 Catalytic do 35.2 1.7E+02 0.0036 25.9 7.3 98 78-188 9-128 (317)
333 cd05074 PTKc_Tyro3 Catalytic d 34.9 1.4E+02 0.003 25.5 6.6 102 78-188 7-133 (273)
334 cd05054 PTKc_VEGFR Catalytic d 34.8 1.1E+02 0.0023 28.1 6.0 75 79-153 16-95 (337)
335 cd05621 STKc_ROCK2 Catalytic d 34.6 1.3E+02 0.0029 28.0 6.8 107 71-189 43-163 (370)
336 cd05086 PTKc_Aatyk2 Catalytic 34.5 1.3E+02 0.0029 25.8 6.4 97 83-189 8-120 (268)
337 cd08528 STKc_Nek10 Catalytic d 33.9 1.3E+02 0.0028 25.8 6.1 99 78-186 8-131 (269)
338 cd05624 STKc_MRCK_beta Catalyt 32.7 2.4E+02 0.0052 25.5 8.0 101 77-189 8-123 (331)
339 cd05602 STKc_SGK1 Catalytic do 32.2 1.4E+02 0.0031 26.8 6.4 95 83-189 8-117 (325)
340 cd05077 PTK_Jak1_rpt1 Pseudoki 32.1 1.5E+02 0.0032 25.7 6.2 82 100-189 32-126 (262)
341 cd07843 STKc_CDC2L1 Catalytic 31.5 1E+02 0.0022 26.8 5.2 99 78-189 13-127 (293)
342 cd05111 PTK_HER3 Pseudokinase 30.6 2.1E+02 0.0046 24.8 7.1 103 78-188 15-129 (279)
343 cd05154 ACAD10_11_like Acyl-Co 30.3 32 0.0007 28.5 1.7 20 23-42 2-21 (223)
344 cd07829 STKc_CDK_like Catalyti 28.6 87 0.0019 26.8 4.2 99 78-189 7-119 (282)
345 cd07880 STKc_p38gamma_MAPK12 C 28.4 2.9E+02 0.0063 25.1 7.8 102 75-189 20-139 (343)
346 cd05610 STKc_MASTL Catalytic d 28.2 1.8E+02 0.004 29.8 7.1 99 78-188 12-124 (669)
347 cd05044 PTKc_c-ros Catalytic d 28.1 77 0.0017 27.1 3.7 82 101-189 27-127 (269)
348 cd05076 PTK_Tyk2_rpt1 Pseudoki 27.9 63 0.0014 28.2 3.2 83 99-189 43-138 (274)
349 cd07857 STKc_MPK1 Catalytic do 27.9 3.8E+02 0.0081 24.0 8.4 102 78-189 8-126 (332)
350 cd08226 PK_STRAD_beta Pseudoki 27.6 3.6E+02 0.0077 24.1 8.2 94 84-189 14-122 (328)
351 cd06631 STKc_YSK4 Catalytic do 27.4 3.6E+02 0.0079 22.8 7.9 98 79-189 9-123 (265)
352 cd05058 PTKc_Met_Ron Catalytic 27.1 76 0.0016 27.0 3.5 100 81-189 6-119 (262)
353 cd05043 PTK_Ryk Pseudokinase d 26.4 1.9E+02 0.0042 24.8 6.0 98 84-189 20-138 (280)
354 cd07834 STKc_MAPK Catalytic do 26.3 2.8E+02 0.0061 24.6 7.2 100 78-189 8-124 (330)
355 cd07874 STKc_JNK3 Catalytic do 25.9 1.9E+02 0.0042 26.2 6.2 102 76-189 23-140 (355)
356 cd08227 PK_STRAD_alpha Pseudok 25.8 1.1E+02 0.0024 27.4 4.5 93 85-189 15-122 (327)
357 COG0510 ycfN Thiamine kinase a 24.1 1.2E+02 0.0025 27.8 4.3 75 80-174 2-76 (269)
358 cd07876 STKc_JNK2 Catalytic do 23.9 2.6E+02 0.0057 25.4 6.7 102 76-189 27-144 (359)
359 cd08216 PK_STRAD Pseudokinase 23.9 2.2E+02 0.0048 25.0 6.0 84 99-189 24-122 (314)
360 PLN02756 S-methyl-5-thioribose 23.6 70 0.0015 31.6 2.9 22 20-41 33-54 (418)
361 cd05594 STKc_PKB_alpha Catalyt 23.6 2.4E+02 0.0052 25.3 6.3 94 81-186 6-113 (325)
362 cd07851 STKc_p38 Catalytic dom 23.2 52 0.0011 30.0 1.8 101 76-189 21-139 (343)
363 cd07875 STKc_JNK1 Catalytic do 22.8 2.9E+02 0.0064 25.2 6.8 101 77-189 31-147 (364)
364 cd05078 PTK_Jak2_Jak3_rpt1 Pse 22.5 77 0.0017 27.1 2.7 80 101-189 28-121 (258)
365 cd05153 HomoserineK_II Homoser 22.2 52 0.0011 29.3 1.6 21 22-42 17-37 (296)
366 cd07879 STKc_p38delta_MAPK13 C 22.1 3.7E+02 0.0081 24.3 7.3 101 77-189 22-138 (342)
367 cd05576 STKc_RPK118_like Catal 22.1 2E+02 0.0043 24.4 5.1 91 81-189 4-106 (237)
368 PTZ00036 glycogen synthase kin 21.7 4.7E+02 0.01 25.1 8.2 101 72-189 67-191 (440)
369 cd07859 STKc_TDY_MAPK_plant Ca 21.2 3.9E+02 0.0084 23.6 7.1 100 78-189 8-124 (338)
370 COG4004 Uncharacterized protei 21.1 3E+02 0.0065 21.8 5.4 56 125-185 16-78 (96)
371 PHA03209 serine/threonine kina 20.9 1.9E+02 0.0042 26.5 5.2 94 77-189 73-178 (357)
372 cd07853 STKc_NLK Catalytic dom 20.7 3.2E+02 0.0068 25.1 6.5 100 78-189 8-124 (372)
373 PRK09550 mtnK methylthioribose 20.3 97 0.0021 30.3 3.1 25 19-43 26-50 (401)
374 KOG4720|consensus 20.1 33 0.00072 33.1 -0.1 18 70-87 81-98 (391)
No 1
>KOG2686|consensus
Probab=100.00 E-value=3.7e-34 Score=268.67 Aligned_cols=181 Identities=37% Similarity=0.654 Sum_probs=157.7
Q ss_pred CHhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecC
Q psy15662 1 MALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLG 80 (256)
Q Consensus 1 ~~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~G 80 (256)
+|..+|++||+|+|++|..+...++++.||.+|.+|+|+.|....+.
T Consensus 22 ~~~~~~~~~l~~~w~~v~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------------------------- 68 (366)
T KOG2686|consen 22 RAKELCAQYLGGAWRDVINEEQRLEVIPGGGSNLLFVVTSSASTTPI--------------------------------- 68 (366)
T ss_pred HHHHHHHHHhhhHHhhhhhhhheeeeccCCCcceEEEEecCcccCCc---------------------------------
Confidence 36789999999999999999999999999999999999987654321
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCcc
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKA 160 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~g 160 (256)
...+++||+||||+.. + +++|..|+++|++||++|+||++||+|+|||+||||| +
T Consensus 69 ----------------~~~~~k~LlRiyg~~~--~-~~~~~~Esv~fa~lSer~lGPkL~G~F~~GR~Eefip------S 123 (366)
T KOG2686|consen 69 ----------------KDEPRKVLLRIYGQGV--D-FSQRETESVMFAILSERGLGPKLYGFFSGGRFEEFIP------S 123 (366)
T ss_pred ----------------ccccceeEEEEecCCc--c-HHHhhhHHHHHHHHhhcCCCcceeeecCCccHhhhcc------c
Confidence 2457899999999987 3 8999999999999999999999999999999999999 9
Q ss_pred ccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhhhhccCCCCccccccCccchhhhhhhhhhhh
Q psy15662 161 RSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQM 240 (256)
Q Consensus 161 r~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
|+|+.+|+++|++++.||++|+++|.+++|++|+|.++|+++++|+..++. +.+. .+ .-...+
T Consensus 124 RtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~~~~~--~~~~----------~~-----~~~~~~ 186 (366)
T KOG2686|consen 124 RTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLKGAKK--IKPT----------EV-----SYSCGP 186 (366)
T ss_pred cccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHhhhhh--cCCC----------cc-----chhccc
Confidence 999999999999999999999999999999999987899999999998741 2111 11 123344
Q ss_pred hccChhhHHHHHHhcC
Q psy15662 241 KKILSKDLNTEADWLK 256 (256)
Q Consensus 241 ~~~~~~~L~~E~~~l~ 256 (256)
+.+..++|..|+++++
T Consensus 187 ~~~~~~~l~~e~~~~~ 202 (366)
T KOG2686|consen 187 DKLEIEDLLLELSLFR 202 (366)
T ss_pred chhhHHHHHHHHHHHH
Confidence 7788888999998863
No 2
>KOG4720|consensus
Probab=99.97 E-value=3.3e-30 Score=237.48 Aligned_cols=170 Identities=27% Similarity=0.477 Sum_probs=146.0
Q ss_pred HhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecCc
Q psy15662 2 ALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGG 81 (256)
Q Consensus 2 ~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~GG 81 (256)
|++||++.-| .|+- .+++.++.|+|+||.|+.|..-
T Consensus 68 a~eLlk~Lrp-~W~~---~~v~~~~fs~gitNkL~~~~vg---------------------------------------- 103 (391)
T KOG4720|consen 68 ALELLKKLRP-HWKP---PEVTFKRFSDGITNKLFSCYVG---------------------------------------- 103 (391)
T ss_pred HHHHHHHhcc-cCCc---cceeeeeeccchhHHHHHhhcc----------------------------------------
Confidence 7889998887 6984 6888889999888888877541
Q ss_pred cccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccc
Q psy15662 82 LTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKAR 161 (256)
Q Consensus 82 lTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr 161 (256)
+.....|++|+||+.| +.+|||++|..+|++|+++|+||+|||.|.||.|++||+ |+
T Consensus 104 ---------------~~~e~~v~vrvyg~~t--e~vIdre~Ev~afk~L~a~G~ap~Ly~tF~NGLvyefi~------g~ 160 (391)
T KOG4720|consen 104 ---------------ENMEDHVLVRVYGHNT--ELVIDRENEVIAFKLLAAYGFAPKLYGTFNNGLVYEFIQ------GK 160 (391)
T ss_pred ---------------cccceeEEEEeccCCC--ceeeccHHHHHHHHHHHHcCcChhhhheecCceEEeeec------Cc
Confidence 1235789999999999 799999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCChHHHHHHHHHHHhhcCCCCCC-CCCcccHHHHHHHHHHHhhhhccCCCCccccccCccchhhhhhhhhhhh
Q psy15662 162 SLKYSELTDPAISRKIAEKMADIHLMQIPV-VKEPTWLWDTIQRWLNTLYLKNTGGNGTAEWRNGETLATECHKKNKIQM 240 (256)
Q Consensus 162 ~Lt~~el~dp~i~~~IA~~La~lH~~~ip~-~k~P~~l~~~i~kwl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (256)
+|.+++|++|++.+.||++||++|++..+. ..+| .||.+|.+|++++ +. .|.+. .......
T Consensus 161 tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp-~lw~km~~f~~lv------~~---~f~de--------~~kq~~~ 222 (391)
T KOG4720|consen 161 TLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKP-PLWEKMRKFLQLV------PT---SFEDE--------INKQNLF 222 (391)
T ss_pred ccChhhccChHHHHHHHHHHHHhheeccCCCCCCC-cHHHHHHHHHHhc------Cc---hhhcc--------cchhhcc
Confidence 999999999999999999999999998773 4566 5999999999987 44 56652 2233355
Q ss_pred hccChhhHHHHHHhcC
Q psy15662 241 KKILSKDLNTEADWLK 256 (256)
Q Consensus 241 ~~~~~~~L~~E~~~l~ 256 (256)
..++..+|.+||.||+
T Consensus 223 ~~~~~~~L~~Ei~~l~ 238 (391)
T KOG4720|consen 223 DEPSPEDLGEEISKLK 238 (391)
T ss_pred cCCCHHHHHHHHHHHH
Confidence 7888899999999985
No 3
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.96 E-value=5.7e-29 Score=231.18 Aligned_cols=143 Identities=30% Similarity=0.600 Sum_probs=130.7
Q ss_pred hHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecCcccc
Q psy15662 5 ICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGGLTN 84 (256)
Q Consensus 5 ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~GGlTN 84 (256)
||++++|+ |+++++++|+|++++|||||.+|.|+.+...
T Consensus 1 ~~~~~~~~-w~~~~~~~i~i~~l~gGlTN~~~~v~~~~~~---------------------------------------- 39 (330)
T PLN02421 1 VCKALFKG-WSDLDDSDFSVERISGGITNLLLKVSVKEEN---------------------------------------- 39 (330)
T ss_pred CchHhCCc-cccCCcCceEEEEeCCcccceEEEEEecCCC----------------------------------------
Confidence 69999985 9999999999999999999999999863211
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccccCC
Q psy15662 85 MLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLK 164 (256)
Q Consensus 85 ~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr~Lt 164 (256)
..+.+||+|+||..+ +.+|||.+|..+++.|++.|+||+++++|++|+|++||+ |++++
T Consensus 40 -------------~~~~~~v~Ri~g~~t--~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G~i~~fi~------g~~l~ 98 (330)
T PLN02421 40 -------------GNEVSVTVRLFGPNT--DYVIDRERELQAIKYLSAAGFGAKLLGVFGNGMIQSFIN------ARTLT 98 (330)
T ss_pred -------------CCCceEEEEEecCCc--CeEechHHHHHHHHHHHhcCCCCceeEEeCCcEeehhhc------CCCCC
Confidence 124589999999998 689999999999999999999999999999999999999 99999
Q ss_pred CCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662 165 YSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 165 ~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~ 210 (256)
.+++.+|.+...||+.|++||++++|..+.| .+|+.|++|++++.
T Consensus 99 ~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~-~~~~~i~~y~~~~~ 143 (330)
T PLN02421 99 PSDMRKPKVAAEIAKELRRLHQVEIPGSKEP-QLWNDIFKFYEKAS 143 (330)
T ss_pred hHHCCCHHHHHHHHHHHHHHhCCCCCCCCCC-cHHHHHHHHHHHhh
Confidence 9999999999999999999999998888777 59999999999874
No 4
>PTZ00296 choline kinase; Provisional
Probab=99.96 E-value=4.4e-29 Score=241.43 Aligned_cols=151 Identities=30% Similarity=0.572 Sum_probs=133.2
Q ss_pred HhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecCc
Q psy15662 2 ALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGG 81 (256)
Q Consensus 2 ~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~GG 81 (256)
+..||++++|+ |.++++++|.|++++|||||.+|.|+++.......
T Consensus 89 ~~~i~~~~vp~-W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~--------------------------------- 134 (442)
T PTZ00296 89 IKKICLEKVPE-WRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNY--------------------------------- 134 (442)
T ss_pred HHHHHHHHCCc-cccCCcccEEEEEecCcccCceEEEEecCCCCccc---------------------------------
Confidence 45899999985 99999999999999999999999999865321100
Q ss_pred cccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccc
Q psy15662 82 LTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKAR 161 (256)
Q Consensus 82 lTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr 161 (256)
...+++||+||||.+| +.+|||..|..++++|+++|+||++|+.|+||||++||+ |+
T Consensus 135 ---------------~~~~~~~lvRiyG~~t--e~lIdR~~E~~v~~~ls~~gi~P~l~~~f~gg~I~efi~------g~ 191 (442)
T PTZ00296 135 ---------------PSIRRRVLFRIYGKDV--DELYNPISEFEVYKTMSKYRIAPQLLNTFSGGRIEEWLY------GD 191 (442)
T ss_pred ---------------cCcCceEEEEecCCCc--cceeCHHHHHHHHHHHHHCCCCCceEEEeCCCEEEEeeC------Cc
Confidence 1236899999999999 688999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCChHHHHHHHHHHHhhcCCCC----C--CCCCcccHHHHHHHHHHHhh
Q psy15662 162 SLKYSELTDPAISRKIAEKMADIHLMQI----P--VVKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 162 ~Lt~~el~dp~i~~~IA~~La~lH~~~i----p--~~k~P~~l~~~i~kwl~~l~ 210 (256)
+|+..++++|.++++||+.|++||.+.. | +++.| .+|++|++|++.+.
T Consensus 192 ~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p-~~f~~i~~~~~~~~ 245 (442)
T PTZ00296 192 PLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTP-CIFKMMEKWKNQLS 245 (442)
T ss_pred cCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCC-cHHHHHHHHHHHHH
Confidence 9999999999999999999999999742 2 45677 48999999999874
No 5
>PTZ00384 choline kinase; Provisional
Probab=99.96 E-value=6.1e-28 Score=229.69 Aligned_cols=149 Identities=20% Similarity=0.350 Sum_probs=130.8
Q ss_pred HhhhHhhhcCCcCcccCCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecCc
Q psy15662 2 ALGICKGYLHGAWKRITAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLGG 81 (256)
Q Consensus 2 ~~~ic~~~l~~~W~~v~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~GG 81 (256)
|+.||++++| +|+++++++++|++++|||||.+|.|+++.....
T Consensus 34 ~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~----------------------------------- 77 (383)
T PTZ00384 34 LKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKD----------------------------------- 77 (383)
T ss_pred HHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecCCCCC-----------------------------------
Confidence 6889999998 6999999999999999999999999987543211
Q ss_pred cccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccc
Q psy15662 82 LTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKAR 161 (256)
Q Consensus 82 lTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr 161 (256)
....+.|++|+||..+ +.+|||.+|..++++|+++|+||++||.|+||+|++||+ |+
T Consensus 78 ---------------~~~~k~Vl~R~~g~~~--~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~g~l~efIe------Gr 134 (383)
T PTZ00384 78 ---------------RYPIKSVCIKKSSTYN--SLVIDNDLQYNIAKLLGDNNFGPKIIGRFGDFTIQEWVE------GN 134 (383)
T ss_pred ---------------ccccceEEEEeccCCC--ceEeccHHHHHHHHHHHhCCCCCeEEEecCCEEEEEEec------cc
Confidence 1124679999999998 799999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCChHHHHHHHHHHHhhcCCCC---CC--CCCcccHHHHHHHHHHHhh
Q psy15662 162 SLKYSELTDPAISRKIAEKMADIHLMQI---PV--VKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 162 ~Lt~~el~dp~i~~~IA~~La~lH~~~i---p~--~k~P~~l~~~i~kwl~~l~ 210 (256)
+|+..++++|.+++.||+.|++||.+.. |. .+.| .+|.+|.+|+..++
T Consensus 135 ~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p-~~~~~i~~w~~~~~ 187 (383)
T PTZ00384 135 TMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTP-MFLTKISTWSQHVE 187 (383)
T ss_pred cCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcc-hHHHHHHHHHHHHH
Confidence 9999999999999999999999999753 22 2456 46999999998764
No 6
>PLN02236 choline kinase
Probab=99.95 E-value=3.9e-27 Score=220.31 Aligned_cols=147 Identities=30% Similarity=0.536 Sum_probs=133.0
Q ss_pred HhhhHhhhcCCcCccc-CCCcEEEEEeccceeeeeEEEEecCCCCCCChhHHHHhhhcccccccccccccccceEEeecC
Q psy15662 2 ALGICKGYLHGAWKRI-TAKDICVKRMSGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLG 80 (256)
Q Consensus 2 ~~~ic~~~l~~~W~~v-~~~~i~v~~isggltN~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~i~~l~G 80 (256)
+++||+.+.+ .|+++ .++.+.|++++||+||.+|.|+.+...
T Consensus 19 ~~~~~~~~~~-~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~------------------------------------ 61 (344)
T PLN02236 19 LKRILHSLAS-KWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKE------------------------------------ 61 (344)
T ss_pred HHHHHHHhcc-hhcCCCCcCcEEEEEcCCcccceeEEEEeCCCC------------------------------------
Confidence 6789999876 69997 889999999999999999999865421
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCcc
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKA 160 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~g 160 (256)
...+++||+|+||+.+ +.+|||.+|..+++.|++.|+||++||+|+||+|++|++ |
T Consensus 62 ----------------~~~~~~~v~Ri~g~~t--~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g~v~efi~------g 117 (344)
T PLN02236 62 ----------------GNLGRKVLVRIYGEGV--ELFFDRDDEIRTFECMSRHGQGPRLLGRFPNGRVEEFIH------A 117 (344)
T ss_pred ----------------CCCCCeEEEEEccCCC--CeeechHHHHHHHHHHHHcCCCCceEEEECCceEEEeeC------C
Confidence 1235799999999998 699999999999999999999999999999999999999 9
Q ss_pred ccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662 161 RSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 161 r~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~ 210 (256)
++++..+++++.+..+||+.|++||++++|..+.| .+|++|.+|++++.
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~-~~~~~i~~~~~~~~ 166 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNV-LLWDRLRNWLKEAK 166 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887777 69999999998773
No 7
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.83 E-value=1.2e-20 Score=163.31 Aligned_cols=98 Identities=35% Similarity=0.649 Sum_probs=86.6
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccccCCCCCCCChHHHHHHHH
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAE 179 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~ 179 (256)
+++|||||||+.+ +.+|||..|..++++|++.|+||++|++|+||+|++||+ |++|+.+++.+|.++..||+
T Consensus 2 ~~~~~~Ri~g~~t--~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g~v~e~i~------g~~l~~~~~~~~~~~~~iA~ 73 (211)
T PF01633_consen 2 PEKYLVRIPGEGT--ENFIDRENENEALKLLSEAGLGPKIIYFFENGRVEEFIE------GRTLSPEDFRNPEILKRIAK 73 (211)
T ss_dssp TSEEEEEEEESCG--CSHHHHHHHHHHHHHHHHTTSSS-EEEEETTEEEEE--S------SEE--CGGGGSHHHHHHHHH
T ss_pred CCEEEEEeCCCCc--ccccCHHHHHHHHHHHHHcCCCCeEEEEcCCCcEEEEec------ccccChhhccChHHHHHHHH
Confidence 6899999999998 799999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHhhcCCCC-CCCCCcccHHHHHHHHH
Q psy15662 180 KMADIHLMQI-PVVKEPTWLWDTIQRWL 206 (256)
Q Consensus 180 ~La~lH~~~i-p~~k~P~~l~~~i~kwl 206 (256)
.|++||.++. +..+.+ .+|+.|++|.
T Consensus 74 ~l~~lH~~~~~~~~~~~-~~~~~i~~~~ 100 (211)
T PF01633_consen 74 LLAKLHSIPISPNSKKP-DLWDRIDKYM 100 (211)
T ss_dssp HHHHHHTHHHTTSSSS--HHHHHHHHHH
T ss_pred HHHHHhhcccccccCcc-hHHHHhhhhc
Confidence 9999999887 555655 6999999993
No 8
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.82 E-value=2.9e-19 Score=155.66 Aligned_cols=125 Identities=34% Similarity=0.591 Sum_probs=110.5
Q ss_pred ceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEee
Q psy15662 73 SVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYI 152 (256)
Q Consensus 73 ~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi 152 (256)
+.+++++||+||.+|+|+..+ ..+.+|++|+|+..+ ..++||..|..+++.|++.|++|++++.+++|+|.+|+
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~----~~~~~~vlR~~~~~~--~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~~~l~e~i 74 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKE----DNQDAVLVRVYGNKT--ELIIDRERELRIHKLLSKHGLAPKLYATFQNGLIYEFI 74 (235)
T ss_pred CeEEEcCCcccceEEEEEcCC----CCCCeEEEEEccCCc--cceecHHHHHHHHHHHHhCCCCCeEEEEeCCcEEEEee
Confidence 368899999999999998531 135799999999987 67899999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCC------CCcccHHHHHHHHHHHhh
Q psy15662 153 PDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVV------KEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~------k~P~~l~~~i~kwl~~l~ 210 (256)
+ |++++..++.++.+...+|+.|++||.+..+.. ..+ .+|+.+.+|++.+.
T Consensus 75 ~------G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 131 (235)
T cd05157 75 P------GRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKP-ILWPTIRKWINLVP 131 (235)
T ss_pred C------CCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCC-cHHHHHHHHHHHhH
Confidence 9 999999999999999999999999999886653 344 68999999998764
No 9
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.81 E-value=2.1e-19 Score=162.72 Aligned_cols=104 Identities=46% Similarity=0.852 Sum_probs=92.9
Q ss_pred CCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccccCCCCCCCChHHHHHH
Q psy15662 98 SEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTDPAISRKI 177 (256)
Q Consensus 98 ~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~I 177 (256)
..++++|+|+||..+ ..+++|..|..+++.|++.|++|++++.|++|+|++|++ |++++..++.++.+..+|
T Consensus 27 ~~~~~~vlRi~~~~~--~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~~~v~e~i~------G~~l~~~~~~~~~~~~~i 98 (302)
T cd05156 27 DEPRKVLLRVYGQSV--ELLIDRERELVVFARLSERNLGPKLYGIFPNGRIEEFIP------SRTLTTEELRDPDISAEI 98 (302)
T ss_pred CCCCeEEEEEecCCC--cceechHHHHHHHHHHHhCCCCCceEEEeCCCchhheeC------CCcCCHhHcCCcHHHHHH
Confidence 346899999999988 578999999999999999999999999999999999999 999998899999999999
Q ss_pred HHHHHhhcCCCCCC-C----CCcccHHHHHHHHHHHhh
Q psy15662 178 AEKMADIHLMQIPV-V----KEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 178 A~~La~lH~~~ip~-~----k~P~~l~~~i~kwl~~l~ 210 (256)
|+.|++||.+..+. . ..| .+|..+.+|....+
T Consensus 99 a~~L~~lH~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 135 (302)
T cd05156 99 ARRMAKLHSIVVPLSPEERDLTP-AIWKLLKQWLDLAE 135 (302)
T ss_pred HHHHHHhhCCCCCCCCCcCcccc-hHHHHHHHHHHHhh
Confidence 99999999987664 2 234 58999999988764
No 10
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.68 E-value=4.3e-16 Score=138.37 Aligned_cols=118 Identities=19% Similarity=0.143 Sum_probs=102.2
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcccc-ccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecC
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERAL-ESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPD 154 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~-idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~ 154 (256)
.+++||+||.+|+++.. +.++++|+++..+ ..+ +||..|..+++.|++.|++|++++.+++|.|.+||+
T Consensus 2 ~~~~~G~tn~~y~~~~~-------~~~~vlR~~~~~~--~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~~~~v~e~i~- 71 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHP-------GISFVWRPQSPVC--KALGVDRQREYQILQALSALGLAPKPILVNEHWLLVEWLE- 71 (256)
T ss_pred CcCCCcCcCCeEEEEeC-------CccEEEeeCCccc--ccccCcHHHHHHHHHHHHhcCCCCceEEEeCCEEEEEecc-
Confidence 45789999999999852 4689999999876 344 899999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662 155 KETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 155 ~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~ 210 (256)
|++++..++.++....++|+.|+++|+++.+. .|..++..+.+|..++.
T Consensus 72 -----G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~--~~~~~~~~~~~~~~~l~ 120 (256)
T TIGR02721 72 -----GEVITLDQFVALDLLLELAALLHQLHSQPRFG--YPLSLKARIAHYWLQID 120 (256)
T ss_pred -----CcccccccccCchhHHHHHHHHHHHhCCCCCC--CCCCHHHHHHHHHHhcc
Confidence 99999999999999999999999999987543 33356788888877663
No 11
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.35 E-value=1.4e-11 Score=101.12 Aligned_cols=101 Identities=29% Similarity=0.378 Sum_probs=89.8
Q ss_pred eEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--CeEEEEe
Q psy15662 74 VIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--GGRIEEY 151 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--nGrIEef 151 (256)
.++++.||.+|.+|+++.. +..|++|++.+.. ...+++..|..+++.|++.++.|++++.+. ++.|.||
T Consensus 2 ~~~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~ 72 (170)
T cd05151 2 HISPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGT--ELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEF 72 (170)
T ss_pred ceeecCCcccCceEEEEEC-------CeEEEEEeCCCCc--ccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEe
Confidence 4778999999999999863 5789999998775 356789999999999999999999999998 7899999
Q ss_pred ecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
++ |+++...++.++....++|+.|++||...+
T Consensus 73 i~------G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~ 104 (170)
T cd05151 73 IE------GSELLTEDFSDPENLEKIAKLLKKLHSSPL 104 (170)
T ss_pred cC------CCccccccccCHHHHHHHHHHHHHHhCCCC
Confidence 99 999987777788999999999999999874
No 12
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.94 E-value=2.7e-08 Score=84.18 Aligned_cols=125 Identities=18% Similarity=0.234 Sum_probs=95.7
Q ss_pred eEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEeeCC-------
Q psy15662 74 VIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVFPG------- 145 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F~n------- 145 (256)
.++++.+|.+|.+|+|+.. .+..+++|+++.........+...|..+++.|++.|+ .|+++++..+
T Consensus 2 ~~~~l~~G~~n~~~~v~~~------~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~ 75 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAG------GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP 75 (223)
T ss_pred cceecCCCccceEEEEEec------CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence 4677899999999999963 2478999999876511135577899999999999888 8999999865
Q ss_pred eEEEEeecCCCCCccccCCCCCC---CC----hHHHHHHHHHHHhhcCCCCCCCC------CcccHHHHHHHHHHHhh
Q psy15662 146 GRIEEYIPDKETRKARSLKYSEL---TD----PAISRKIAEKMADIHLMQIPVVK------EPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~~el---~d----p~i~~~IA~~La~lH~~~ip~~k------~P~~l~~~i~kwl~~l~ 210 (256)
..|.+|++ |.++....+ .+ ..+..++|+.|++||+...+... .+..++..+..|...+.
T Consensus 76 ~~v~e~i~------G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (223)
T cd05154 76 FYVMERVD------GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYD 147 (223)
T ss_pred eEEEEEeC------CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHH
Confidence 58999999 999887553 22 35688999999999997653221 11246788888888764
No 13
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.83 E-value=2.2e-08 Score=88.93 Aligned_cols=113 Identities=14% Similarity=0.135 Sum_probs=84.0
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEeeCC----eEEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVFPG----GRIEE 150 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F~n----GrIEe 150 (256)
.++.+|.||.+|+.. +..+|+|++-+.. ...+..+|..+++.|...|+ .|+++++.+. |+|.+
T Consensus 7 ~~i~~G~t~~~y~~~---------~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---------TGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEec---------CCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeee
Confidence 578999999999842 3579999998755 23456889999999999999 7999999654 89999
Q ss_pred eecCCCCCcccc-----CCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHH
Q psy15662 151 YIPDKETRKARS-----LKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLN 207 (256)
Q Consensus 151 fi~~~~~~~gr~-----Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~ 207 (256)
||+ |.+ +.......+.+...+|+.|+++|+++.+...-| ..+..+.++++
T Consensus 75 ~i~------G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~-~~~~~~~~~l~ 129 (226)
T TIGR02172 75 LIV------GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQ-SYKEKIRKFIE 129 (226)
T ss_pred ecC------CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHH-HHHHHHHHHHH
Confidence 999 875 332333335688999999999999876544333 34455555544
No 14
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=98.46 E-value=8e-07 Score=80.07 Aligned_cols=97 Identities=23% Similarity=0.284 Sum_probs=77.0
Q ss_pred cceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEeeCC-----
Q psy15662 72 DSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVFPG----- 145 (256)
Q Consensus 72 ~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F~n----- 145 (256)
..++.++.||++|.+|+|... ...++||+++..+ ..++..|..+++.|+++|+ .|+++..-.|
T Consensus 16 ~~~i~~i~~G~~n~~y~v~~~-------~~~~vLr~~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~ 84 (296)
T cd05153 16 LLSFEGISAGIENTNYFVTTD-------SGRYVLTLFEKVS----AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSE 84 (296)
T ss_pred hhheecccCccccceEEEEeC-------CCcEEEEEcCCCC----hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeee
Confidence 346889999999999999863 3579999998633 2356779999999999997 4777764332
Q ss_pred -----eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 146 -----GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 -----GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
..|.+|++ |++++. .++.....+|+.|++||...
T Consensus 85 ~~~~~~~l~~~i~------G~~~~~---~~~~~~~~lg~~La~lH~~~ 123 (296)
T cd05153 85 LAGKPAALVEFLA------GEHLTR---PTAAHCRQIGEALARLHLAA 123 (296)
T ss_pred eCCceEEEEEeCC------CCCCCC---CCHHHHHHHHHHHHHHHHHh
Confidence 36889999 998865 46788999999999999864
No 15
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.39 E-value=4.4e-06 Score=73.37 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=77.2
Q ss_pred Eeec-CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEE
Q psy15662 76 FTLL-GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEE 150 (256)
Q Consensus 76 ~~l~-GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEe 150 (256)
++++ |..+|.+|+++.. ..++++|+..... ..++..|..+++.|++....|++++.++ ++.|.+
T Consensus 4 ~~~~~g~~~~~v~~~~~~-------~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 72 (244)
T cd05150 4 ERVTEGQSGATVYRLDGK-------NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTS 72 (244)
T ss_pred eecCCCCCcCeEEEEcCC-------CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEE
Confidence 4454 5556999999852 3689999976542 2367889999999999999999999986 379999
Q ss_pred eecCCCCCccccCCCCC--CCChHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKYSE--LTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~~e--l~dp~i~~~IA~~La~lH~~~i 189 (256)
|++ |+++.... ...+.+..++|+.|+++|+++.
T Consensus 73 ~i~------G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~ 107 (244)
T cd05150 73 AVP------GVPAAALWEELEPERLVDALAEALRRLHALPV 107 (244)
T ss_pred eeC------CccHhHhhcccCHHHHHHHHHHHHHHHhcCCc
Confidence 999 99997554 4456789999999999999764
No 16
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.21 E-value=3.5e-06 Score=71.18 Aligned_cols=101 Identities=28% Similarity=0.449 Sum_probs=76.5
Q ss_pred eEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEee-----CC--
Q psy15662 74 VIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVF-----PG-- 145 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F-----~n-- 145 (256)
.+++++||.+|.+|+|+.. ...+++|++.... .......|..+++.|+++|+ .|++++.. .+
T Consensus 1 ~i~~l~~G~~n~~~~v~~~-------~~~~vlK~~~~~~---~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~ 70 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTD-------DGRYVLKFYRPPD---AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFP 70 (239)
T ss_dssp -EEEEEESSSSEEEEEEET-------TSEEEEEEESSHH---HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEE
T ss_pred CCccCCCCCeeeEEEEEEC-------CcEEEEEEeCCCC---CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccc
Confidence 3678999999999999973 2699999987651 33455689999999999999 88999843 22
Q ss_pred eEEEEeecCCCCCccccCCC--CCCCChHHHHHHHHHHHhhcCCCCC
Q psy15662 146 GRIEEYIPDKETRKARSLKY--SELTDPAISRKIAEKMADIHLMQIP 190 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~--~el~dp~i~~~IA~~La~lH~~~ip 190 (256)
..+.+|++ |+++.. ..-..+.+..++|+.|++||....+
T Consensus 71 ~~~~~~i~------g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~ 111 (239)
T PF01636_consen 71 YLLMEYIP------GRPLDDELSPEQRPELLRQLGRALAQLHQVPPP 111 (239)
T ss_dssp EEEEEEES------SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTT
T ss_pred eEEEEEec------cccccccccccccccccccchhhhhhccccccc
Confidence 47999999 998876 2223356888999999999997533
No 17
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.04 E-value=2.7e-05 Score=68.42 Aligned_cols=93 Identities=14% Similarity=0.234 Sum_probs=73.0
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhc-CC-CCceeEeeCC-------eEEE
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSER-KL-GPTLHGVFPG-------GRIE 149 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~-gl-gPkl~g~F~n-------GrIE 149 (256)
+||.+|.+|++. ..+++|++.... ...+...|..+++.|++. ++ .|++++.-+. +.|.
T Consensus 7 ~gG~~n~vy~~~----------~~~VlR~~~~~~---~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~ 73 (235)
T cd05155 7 SGGTDNATFRLG----------DDMSVRLPSAAG---YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY 73 (235)
T ss_pred CCCcccceEEcC----------CceEEEcCCccc---hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence 599999999884 358999987643 334678899999999875 44 7787765332 5799
Q ss_pred EeecCCCCCccccCCCCCCCCh-HHHHHHHHHHHhhcCCCCC
Q psy15662 150 EYIPDKETRKARSLKYSELTDP-AISRKIAEKMADIHLMQIP 190 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~~el~dp-~i~~~IA~~La~lH~~~ip 190 (256)
+||+ |+++....+.++ .+...+|+.|+++|+++.+
T Consensus 74 ~~i~------G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~ 109 (235)
T cd05155 74 RWLE------GETATAAALSDPSEFAEDLADFLAALRQIDPS 109 (235)
T ss_pred Eeec------CCCCCccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 9999 999987776665 6788999999999998754
No 18
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=98.03 E-value=2.7e-05 Score=71.21 Aligned_cols=98 Identities=20% Similarity=0.183 Sum_probs=74.1
Q ss_pred cceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEeeCCe----
Q psy15662 72 DSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVFPGG---- 146 (256)
Q Consensus 72 ~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F~nG---- 146 (256)
...+..+.+|.+|.+|+|... ..++++|+|.... .......|..++..|.+.|+ .|+++..-.|.
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t~-------~~~~vLK~~~~~~---~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~ 93 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTTD-------VGRYILTLYEKRV---KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLST 93 (307)
T ss_pred ceeccccCCccccceEEEEeC-------CCcEEEEEecCCC---CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehh
Confidence 345788899999999999852 3479999987642 11233467788889999998 67877754433
Q ss_pred ------EEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 147 ------RIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 147 ------rIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
.+-+|++ |+++... ++...+.+++.||+||...
T Consensus 94 ~~g~~~~l~e~i~------G~~~~~~---~~~~~~~~G~~LA~lH~~~ 132 (307)
T TIGR00938 94 LAGKPACLVEFLQ------GLSVGRP---TAMHCRPVGEVLAWMHLAG 132 (307)
T ss_pred cCCeEEEEEEeCC------CCCCCCC---CHHHHHHHHHHHHHHHhhh
Confidence 6889999 9988642 5667889999999999854
No 19
>PLN02876 acyl-CoA dehydrogenase
Probab=97.68 E-value=0.00082 Score=70.12 Aligned_cols=129 Identities=16% Similarity=0.227 Sum_probs=86.5
Q ss_pred cceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHh-cCC-CCceeEeeCC----
Q psy15662 72 DSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSE-RKL-GPTLHGVFPG---- 145 (256)
Q Consensus 72 ~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~-~gl-gPkl~g~F~n---- 145 (256)
.+.+.++.||.+|.+|+++... ......+++|..........-.+...|..+++.|++ .++ -|++|+...+
T Consensus 40 ~~~v~~l~gG~sn~ty~l~~~~---~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~ 116 (822)
T PLN02876 40 TFKVSQFGHGQSNPTFLLEVGN---GGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVI 116 (822)
T ss_pred ceeEEEeCCCCcCceEEEEECC---CCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcC
Confidence 3678999999999999998742 111257999997654300111245689999999975 444 6888887543
Q ss_pred ---eEEEEeecCCCCCccccCCCCCCC--Ch----HHHHHHHHHHHhhcCCCCCCC-----CCcc-cHHHHHHHHHHHh
Q psy15662 146 ---GRIEEYIPDKETRKARSLKYSELT--DP----AISRKIAEKMADIHLMQIPVV-----KEPT-WLWDTIQRWLNTL 209 (256)
Q Consensus 146 ---GrIEefi~~~~~~~gr~Lt~~el~--dp----~i~~~IA~~La~lH~~~ip~~-----k~P~-~l~~~i~kwl~~l 209 (256)
..|-||++ |+++....+. +| .+..++++.|+++|+++.+.. ..|. ++-..+.+|..+.
T Consensus 117 G~~flVME~v~------G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~ 189 (822)
T PLN02876 117 GTAFYIMEYLE------GRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQY 189 (822)
T ss_pred CCceEEEEecC------CcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHH
Confidence 47899999 9987644332 12 367789999999999875421 2232 3345677776653
No 20
>PRK05231 homoserine kinase; Provisional
Probab=97.64 E-value=0.00028 Score=64.48 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=70.5
Q ss_pred ceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC-CCceeEee--------
Q psy15662 73 SVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL-GPTLHGVF-------- 143 (256)
Q Consensus 73 ~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F-------- 143 (256)
..+..+.||..|.+|+|+.. ...++||+|.... ......|..++..|+++|+ .|+++..-
T Consensus 25 ~~~~~l~~G~~n~~y~v~t~-------~g~~vLK~~~~~~----~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~ 93 (319)
T PRK05231 25 LSLKGIAEGIENSNFFLTTT-------QGEYVLTLFERLT----AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGEL 93 (319)
T ss_pred hccchhccccccceEEEEeC-------CCcEEEEEeccCC----hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeee
Confidence 35677899999999999863 3479999986222 1233457788899999998 46766532
Q ss_pred CC--eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 144 PG--GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 144 ~n--GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
.+ ..+.+|++ |+.+.. .++...+.+++.||+||...
T Consensus 94 ~g~~~~l~~~l~------G~~~~~---~~~~~~~~~G~~LA~lH~~~ 131 (319)
T PRK05231 94 AGKPAAIVTFLE------GKWPRA---PTAAHCAEVGEMLARMHLAG 131 (319)
T ss_pred CCEEEEEEEecC------CCCCCC---CCHHHHHHHHHHHHHHHhhh
Confidence 12 37889999 887653 35677889999999999854
No 21
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.45 E-value=0.0014 Score=50.72 Aligned_cols=98 Identities=23% Similarity=0.292 Sum_probs=75.5
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhc-CCCCceeEeeC----CeEEE
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSER-KLGPTLHGVFP----GGRIE 149 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~-glgPkl~g~F~----nGrIE 149 (256)
+..+..|..|.+|++... ...++++++.... . ..+...|..+++.|+.. ...|++++.+. ...+.
T Consensus 3 ~~~i~~g~~~~v~~~~~~-------~~~~~iK~~~~~~--~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~ 72 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-------DEDYVLKINPSRE--K-GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLM 72 (155)
T ss_pred ceecccccccceEEEEec-------CCeEEEEecCCCC--c-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEE
Confidence 345778999999999963 2689999986654 2 23566899999999887 77889999887 46999
Q ss_pred EeecCCCCCccccCCCC-CCCChHHHHHHHHHHHhhcCCC
Q psy15662 150 EYIPDKETRKARSLKYS-ELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~~-el~dp~i~~~IA~~La~lH~~~ 188 (256)
+|++ |..+... ....+.+...+++.|+.+|...
T Consensus 73 e~~~------g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~ 106 (155)
T cd05120 73 EWIE------GETLDEVSEEEKEDIAEQLAELLAKLHQLP 106 (155)
T ss_pred EecC------CeecccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999 7777532 2334678889999999999864
No 22
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=97.22 E-value=0.0005 Score=63.01 Aligned_cols=109 Identities=19% Similarity=0.170 Sum_probs=67.1
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecC
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPD 154 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~ 154 (256)
+.++. |.||..|++.. ...+.++.|++++.. ..++.|... ..+..+.. +.+.++++++|+.
T Consensus 11 ~~~~~-g~t~~~~~~~~------~g~~~~~~r~~~p~~--~~~~~~~~~-~~l~~~~~--------~~~~~~~~~q~~~- 71 (269)
T COG0510 11 ITPLN-GLTGYAFRIEG------EGTRVFLKRNFEPFL--PALIFRLIV-PKLLWLKR--------IANGGVLVAQYWE- 71 (269)
T ss_pred eeecc-CCcceeEEeeC------CCCeeeeecCCCcch--HHHHHHhhh-hhhhhhcc--------cccCCceEEeeec-
Confidence 33433 78888888853 234566777777766 444444333 11111111 4566789999999
Q ss_pred CCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCc--ccHHHHHHHHHHHhh
Q psy15662 155 KETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEP--TWLWDTIQRWLNTLY 210 (256)
Q Consensus 155 ~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P--~~l~~~i~kwl~~l~ 210 (256)
++++|+.+++ .+.+||..|+++|.........| ...|..+.++++.+.
T Consensus 72 ----~~~~l~~~~~----~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (269)
T COG0510 72 ----NGRTLTPEDM----NLKKIAHILKKLHNSVPLLHQLPRSGSSFIEPKDYLELLW 121 (269)
T ss_pred ----cccccCcccc----chHHHHHHHHHhcCccchHHHHHhhcchHhhHHHHHHHHH
Confidence 6999998843 35688999999998442222111 133567777777665
No 23
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.94 E-value=0.016 Score=53.89 Aligned_cols=95 Identities=13% Similarity=0.103 Sum_probs=67.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCC-Ccee-------EeeCC--eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLG-PTLH-------GVFPG--GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glg-Pkl~-------g~F~n--Gr 147 (256)
..++-.|.+|+|... .+..+++|+|.+.. ........|...+..|+++|+. |..+ ....+ ..
T Consensus 33 ~l~s~eN~vy~v~~~------~~~~~vlKv~r~~~--~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~ 104 (325)
T PRK11768 33 ALNSYENRVYQFGDE------DGRRVVAKFYRPER--WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFA 104 (325)
T ss_pred eeccccceEEEEecC------CCCEEEEEEcCccc--CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEE
Confidence 457778999999853 35689999996542 1223345788889999999986 3222 12222 25
Q ss_pred EEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
+.+|++ |+++.. .++...+.+++.||+||....
T Consensus 105 l~~~~~------G~~~~~---~~~~~~~~lG~~LarlH~~~~ 137 (325)
T PRK11768 105 LFPRRG------GRAPEL---DNLDQLEWVGRFLGRIHQVGA 137 (325)
T ss_pred EEeeeC------CCCCCC---CCHHHHHHHHHHHHHHHhhcc
Confidence 778899 988753 367888999999999999554
No 24
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.76 E-value=0.012 Score=53.82 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=72.3
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhc-CC-CCceeEeeCCeEEEEee
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSER-KL-GPTLHGVFPGGRIEEYI 152 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~-gl-gPkl~g~F~nGrIEefi 152 (256)
+.....|.+|.+|.|.. ..+..+++|+.-... ......+|..+++.|+.+ .+ -|+++...++..+++++
T Consensus 16 ~~~~~~g~~~~v~~i~~------~~g~~~VlR~p~~~~---~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~~~~y~~i 86 (276)
T cd05152 16 LSLNESGLDFQVVFAKD------TDGVPWVLRIPRRPD---VSERAAAEKRVLALVRKHLPVQVPDWRVHTPELIAYPKL 86 (276)
T ss_pred ceecCCcceeEEEEEEc------CCCCeEEEEecCCHH---HHHHHHHHHHHHHHHHhcCCCCCCceeeecCceEEEecc
Confidence 44456788899998853 236799999985432 334557899999999875 33 46766666677889999
Q ss_pred cCCCCCccccCCCCCC-------------CChHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKYSEL-------------TDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~el-------------~dp~i~~~IA~~La~lH~~~i 189 (256)
+ |.++..-+. ..+.+...+|+.|+++|+++.
T Consensus 87 ~------G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~ 130 (276)
T cd05152 87 P------GVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQ 130 (276)
T ss_pred C------CCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCCh
Confidence 9 987743221 235588999999999998764
No 25
>PRK10593 hypothetical protein; Provisional
Probab=96.64 E-value=0.017 Score=53.21 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=70.6
Q ss_pred ceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcC--CCCceeEeeC------
Q psy15662 73 SVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERK--LGPTLHGVFP------ 144 (256)
Q Consensus 73 ~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~g--lgPkl~g~F~------ 144 (256)
..+..+.||-+|..|+++.. ..+++++++-... ..-.-..|...++.|++.+ --|++|+...
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~-------~~~~~~k~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g 86 (297)
T PRK10593 17 SRVECISEQPYAALWALYDS-------QGNPMPLMARSFS---TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG 86 (297)
T ss_pred heeeecCCccceeEEEEEcC-------CCCEEEEEecccc---cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC
Confidence 46678999999999999853 2357767654321 1123468999999999975 4899998642
Q ss_pred -CeEEEEeecCCCCCccccCCCCCCCCh----HHHHHHHHHHHhhcCCC
Q psy15662 145 -GGRIEEYIPDKETRKARSLKYSELTDP----AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 145 -nGrIEefi~~~~~~~gr~Lt~~el~dp----~i~~~IA~~La~lH~~~ 188 (256)
.+.|-|||+ |.++.... .++ .+...+|+.|+++|+.+
T Consensus 87 ~~~LVmE~i~------G~~~~~~~-~~~~~~~~l~~~l~~~La~LH~~~ 128 (297)
T PRK10593 87 PDVLLLERLR------GVSVEAPA-RTPERWEQLKDQIVEGLLAWHRID 128 (297)
T ss_pred CeEEEEeccC------CEecCCCC-CCHHHHHHHHHHHHHHHHHHhCCC
Confidence 369999999 88886422 222 34455679999999965
No 26
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.36 E-value=0.032 Score=54.23 Aligned_cols=105 Identities=13% Similarity=0.098 Sum_probs=74.0
Q ss_pred ccceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCC---Ccc--ccccH-HHHHHHHHHHHhc--CCCCceeEe
Q psy15662 71 TDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH---GER--ALESI-ITDSVIFTLLSER--KLGPTLHGV 142 (256)
Q Consensus 71 ~~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t---~e~--~~idR-~~E~~i~~~Ls~~--glgPkl~g~ 142 (256)
...++..++||-.|.+|+|+.. ...++|+|+.-.+.. ++. +-.+| ..|...++.+++. +.-|++|++
T Consensus 27 ~~~~~~elggGn~N~VyrV~~~-----~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~ 101 (401)
T PRK09550 27 ALLTAREIGDGNLNLVFRVSDT-----EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY 101 (401)
T ss_pred ccceeeEcCCCceEEEEEEEeC-----CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE
Confidence 4567889999999999999963 122589999854321 111 12344 3588888888765 668999999
Q ss_pred eCC--eEEEEeecCCCCCcccc-CC---CCCCCChHHHHHHHHHHHhhcC
Q psy15662 143 FPG--GRIEEYIPDKETRKARS-LK---YSELTDPAISRKIAEKMADIHL 186 (256)
Q Consensus 143 F~n--GrIEefi~~~~~~~gr~-Lt---~~el~dp~i~~~IA~~La~lH~ 186 (256)
.+. -.|-||++ +.+ +. .+.-..|.+.+.|++-||++|.
T Consensus 102 D~~~~~lVME~L~------~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f 145 (401)
T PRK09550 102 DEELAVTVMEDLS------DHKILRKGLIDGKKYPKLAEHIGEFLARTLF 145 (401)
T ss_pred CCCCCEEEEecCC------CccHHHHHHhcCCccHHHHHHHHHHHHHHHh
Confidence 885 79999999 533 21 1223347899999999999884
No 27
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.28 E-value=0.028 Score=53.20 Aligned_cols=103 Identities=14% Similarity=0.212 Sum_probs=74.5
Q ss_pred ccceEEeecCccccceeEEEeecCCCCCCCceEEEEec--CCCCCccccccHHHHHHHHHHHHhcCC-CCceeEeeCCe-
Q psy15662 71 TDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIY--GQTHGERALESIITDSVIFTLLSERKL-GPTLHGVFPGG- 146 (256)
Q Consensus 71 ~~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIy--G~~t~e~~~idR~~E~~i~~~Ls~~gl-gPkl~g~F~nG- 146 (256)
+...+..++||.+|..|.+.. ...++|||.. +... ....+++.|..+++.|....+ -|..++....|
T Consensus 26 ~~~~v~~~~~G~sn~t~~~~~-------~~~~~vlR~P~~~~~~--~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~ 96 (321)
T COG3173 26 GLLIVEEISGGWSNDTFRLGD-------TGQKYVLRKPPRGDPV--ESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGY 96 (321)
T ss_pred CCceeeeccCCcccceEEEec-------CCceEEEecCCccccc--hhhhHHHhHHHHHHHhcCCCCCCcccccccccCC
Confidence 344566779999999999984 2689999965 3434 567788999999999888544 45666665543
Q ss_pred -----EEEEeecCCCCCccccCCCCCCCC---hHHHH-HHHHHHHhhcCCC
Q psy15662 147 -----RIEEYIPDKETRKARSLKYSELTD---PAISR-KIAEKMADIHLMQ 188 (256)
Q Consensus 147 -----rIEefi~~~~~~~gr~Lt~~el~d---p~i~~-~IA~~La~lH~~~ 188 (256)
-|.+|++ |+.+....... ..+.. ..|+.|+.||+++
T Consensus 97 ~g~pf~v~~~ve------Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~id 141 (321)
T COG3173 97 LGTPFYVMEWVE------GEVVWSALPPESLGRQFALDALADFLAELHSID 141 (321)
T ss_pred CCCceEEEEEec------ceeccCcCCcccchHHHHHHHHHHHHHHHhCCC
Confidence 5899999 87554433222 23444 7899999999987
No 28
>PRK06148 hypothetical protein; Provisional
Probab=95.69 E-value=0.068 Score=57.49 Aligned_cols=97 Identities=14% Similarity=0.221 Sum_probs=69.1
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhc--CC-CCceeEee--------
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSER--KL-GPTLHGVF-------- 143 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~--gl-gPkl~g~F-------- 143 (256)
+..+ +|.-|.+|+|+.. .+..++|||+.+.. .......|..++..|+++ ++ -|+++..-
T Consensus 30 ~~~L-~s~~d~nf~v~~~------~g~~yVLKi~~~~~---~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v 99 (1013)
T PRK06148 30 ATPL-DGERDLNFRLTTD------DGADYILKIVNPSE---PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASA 99 (1013)
T ss_pred Eeec-CCcCCceEEEEeC------CCCeEEEEEcCCcc---chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEe
Confidence 4455 5667999999863 35689999997643 122345577788888887 66 35554321
Q ss_pred ---CC----eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCC
Q psy15662 144 ---PG----GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLM 187 (256)
Q Consensus 144 ---~n----GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~ 187 (256)
+| .|+.+|++ |+++....-..+...+++++.|++||..
T Consensus 100 ~~~~G~~~~vrLl~~l~------G~~l~~~~~~t~~~~~~lG~~larlh~a 144 (1013)
T PRK06148 100 QDPDGEPRLLRLLSWLP------GTPLAEAAPRTEALLDNLGRALGRLDRA 144 (1013)
T ss_pred ecCCCceEEEEEEeccC------CCcHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 11 36899999 9999753335688999999999999984
No 29
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.51 E-value=0.075 Score=50.41 Aligned_cols=95 Identities=20% Similarity=0.295 Sum_probs=71.5
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCc---------eeEeeCC
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPT---------LHGVFPG 145 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPk---------l~g~F~n 145 (256)
+..+.+ .-|.+|+|... ...++||||-+.. .-.+..-|...+..|+++|+... .+..+.+
T Consensus 31 ~~~l~s-~eN~~f~~~~~-------~g~~iLki~~~~~---~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~ 99 (331)
T COG2334 31 LRGLNS-EENSNFRVQTE-------DGRYILKIYRPGW---TRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSG 99 (331)
T ss_pred cccccc-ccCceEEEEec-------CCCeEEEEecCCC---CHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccC
Confidence 334444 88999999964 4556999998862 22456678999999999998432 2344444
Q ss_pred ----eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 146 ----GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 ----GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
-+|-+|++ |+++.. -.+.+..+.+++.|++||..-
T Consensus 100 ~~r~a~lf~~l~------G~~~~~--~~~~~~~~~lG~~LgrlH~a~ 138 (331)
T COG2334 100 GPRPAALFEYLP------GRPLER--DDNAEQLEELGRMLGRLHLAL 138 (331)
T ss_pred CceeEEEEEecC------CcCcCC--CCcHHHHHHHHHHHHHHHHHh
Confidence 38899999 999986 556778999999999999853
No 30
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.50 E-value=0.085 Score=47.55 Aligned_cols=83 Identities=18% Similarity=0.188 Sum_probs=58.6
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCC-CceeEeeC--------C--eEEEEeec
Q psy15662 85 MLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLG-PTLHGVFP--------G--GRIEEYIP 153 (256)
Q Consensus 85 ~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glg-Pkl~g~F~--------n--GrIEefi~ 153 (256)
..|+|... ...++|+++.... .....|..++..|+++|+. |+++..-. + .++.+|++
T Consensus 11 ~v~~v~t~-------~g~~~LK~~~~~~-----~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~ 78 (313)
T TIGR02906 11 NVYKVETD-------SGNKCLKKINYPP-----ERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIE 78 (313)
T ss_pred cEEEEEeC-------CCCeEEEEcCCCH-----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhcc
Confidence 47888853 2357888764221 1234577888899999983 46665422 2 48999999
Q ss_pred CCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
|+++. ..++.-...+++.||+||...
T Consensus 79 ------G~~~~---~~~~~~~~~~g~~La~lH~~~ 104 (313)
T TIGR02906 79 ------GRECD---FNNPIDLKKAAKGLALFHHAS 104 (313)
T ss_pred ------CcCCC---CCCHHHHHHHHHHHHHHHHhC
Confidence 99886 346777889999999999854
No 31
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.43 E-value=0.17 Score=49.69 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=72.0
Q ss_pred ccceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCC---cc--ccccHH-HHHHHHHHHHhc--CCCCceeEe
Q psy15662 71 TDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG---ER--ALESII-TDSVIFTLLSER--KLGPTLHGV 142 (256)
Q Consensus 71 ~~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~---e~--~~idR~-~E~~i~~~Ls~~--glgPkl~g~ 142 (256)
...++..+.||-.|.+|+|+.. ..+|+||-..+... ++ .-.+|. .|...++.+++. ..-|++|++
T Consensus 33 ~~l~~~eiggGn~N~VyrV~~~-------~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ 105 (418)
T PLN02756 33 DDLKIKEVGDGNLNFVYIVVSS-------SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHF 105 (418)
T ss_pred CCceEEEcCCCceeeEEEEEcC-------CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEE
Confidence 4568889999999999999852 35799988764331 00 123443 466666666543 588999999
Q ss_pred eC--CeEEEEeecCCCCCcc--ccCCCCC---CCChHHHHHHHHHHHhh
Q psy15662 143 FP--GGRIEEYIPDKETRKA--RSLKYSE---LTDPAISRKIAEKMADI 184 (256)
Q Consensus 143 F~--nGrIEefi~~~~~~~g--r~Lt~~e---l~dp~i~~~IA~~La~l 184 (256)
.+ ...+-||++ + +.+...- ...|.+++.|+..|++.
T Consensus 106 ded~~vlvME~L~------~~~~ilr~~Ll~G~~~p~~a~~ig~~la~t 148 (418)
T PLN02756 106 DRTMALIGMRYLE------PPHIILRKGLIAGIEYPLLAEHMSDYMAKT 148 (418)
T ss_pred CCCCCEEEEeecC------CcceehhhhhccCCCCHHHHHHHHHHHHHH
Confidence 98 578999998 5 4444322 34489999999999996
No 32
>PRK06149 hypothetical protein; Provisional
Probab=94.94 E-value=0.19 Score=53.86 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=68.7
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhc--CCC-CceeE--------ee
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSER--KLG-PTLHG--------VF 143 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~--glg-Pkl~g--------~F 143 (256)
+..+ +|--|.+|+|+.. ...++|||+-..- +. .....|..++..|+++ |+. |+++- ..
T Consensus 36 ~~~L-~s~~d~nf~v~t~-------~~~yVLKi~~~~~--~~-~~l~~e~~~l~hL~~~~~glpvp~pi~t~~G~~~~~~ 104 (972)
T PRK06149 36 LTEL-GSQQDRNFRVDSD-------GGRFVLKICHAAY--AA-VELEAQHAALRHLAEREPALRVPVVIPALDGEELLTL 104 (972)
T ss_pred EEec-CCcCcceEEEEec-------CCcEEEEeCCccC--Ch-HHHHHHHHHHHHHHhhCCCCCCceeeECCCCCeEEEE
Confidence 4444 6777999999863 2579999987543 12 3456778888889888 774 44432 11
Q ss_pred --C-C---eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCC
Q psy15662 144 --P-G---GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLM 187 (256)
Q Consensus 144 --~-n---GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~ 187 (256)
+ + .|+.+|++ |+++....-.++...+.+++.+++||..
T Consensus 105 ~~~g~~~~vrL~~~l~------G~~~~~~~~~~~~~~~~lG~~lArlh~a 148 (972)
T PRK06149 105 DVRGQGLRVRLLDYLP------GQPLTRLGHLAPASVAGLGALCARVARA 148 (972)
T ss_pred ecCCceEEEEEEEecC------CccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1 38999999 9998765444888999999999999984
No 33
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=94.92 E-value=0.15 Score=42.82 Aligned_cols=96 Identities=18% Similarity=0.246 Sum_probs=64.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-cc------ccHHHHHHHHHHHHhcCC-CCceeEeeCC--eEEEE
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-AL------ESIITDSVIFTLLSERKL-GPTLHGVFPG--GRIEE 150 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~------idR~~E~~i~~~Ls~~gl-gPkl~g~F~n--GrIEe 150 (256)
|-+..+|++... +..+++++.-...... .. .....|..++..|...++ .|.+++..++ ..|.|
T Consensus 5 G~~~~vy~~~~~-------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 5 GAEAIIYLGDFL-------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CceEEEEEeecC-------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence 456678888742 4567777754322000 00 112368888999988874 6777777765 79999
Q ss_pred eecCCCCCccccCCCCCCCCh-HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKYSELTDP-AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~~el~dp-~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|........ .+..+||+.|+.+|...+
T Consensus 78 ~~~------g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 78 YIE------GKPLKDVIEEGNDELLREIGRLVGKLHKAGI 111 (199)
T ss_pred EEC------CccHHHHHhhcHHHHHHHHHHHHHHHHHCCe
Confidence 999 888753221212 789999999999998653
No 34
>PRK12396 5-methylribose kinase; Reviewed
Probab=94.89 E-value=0.043 Score=53.59 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=48.9
Q ss_pred ccccHH-HHHHHHHHHHhc--CCCCceeEeeCC--eEEEEeecCCCCCccccCCCC---CCCChHHHHHHHHHHHhhcCC
Q psy15662 116 ALESII-TDSVIFTLLSER--KLGPTLHGVFPG--GRIEEYIPDKETRKARSLKYS---ELTDPAISRKIAEKMADIHLM 187 (256)
Q Consensus 116 ~~idR~-~E~~i~~~Ls~~--glgPkl~g~F~n--GrIEefi~~~~~~~gr~Lt~~---el~dp~i~~~IA~~La~lH~~ 187 (256)
+-.+|. .|..+++.+++. +.-|++|++.+. -.|-|++++ ...|... --..|.++..|+.-||+.|..
T Consensus 74 L~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~~-----~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~ 148 (409)
T PRK12396 74 LSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLSD-----HTILRTALINHEIFPRLADDLTTFLVNTLLL 148 (409)
T ss_pred CChHHHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCcc-----cHHHHHHHHcCCcChhHHHHHHHHHHHHHhh
Confidence 445664 588999988773 578999999984 688899982 3434322 123589999999999998873
No 35
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.84 E-value=0.17 Score=46.89 Aligned_cols=93 Identities=14% Similarity=0.155 Sum_probs=58.9
Q ss_pred ccceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHh--cCCCCceeEeeC----
Q psy15662 71 TDSVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSE--RKLGPTLHGVFP---- 144 (256)
Q Consensus 71 ~~~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~---- 144 (256)
.-..+.++.||-.|..|+++. ...+++|++..... ..--..|..-++.|++ -...|++|+...
T Consensus 18 ~i~~~~~v~GG~i~~a~~~~~-------~~~~~FvK~~~~~~----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~ 86 (288)
T PF03881_consen 18 KITSIEPVSGGDINEAYRLDT-------DGGSYFVKVNSESG----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD 86 (288)
T ss_dssp ---EEEEE--SSSSEEEEEET-------TS-EEEEEEEEGGG----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC
T ss_pred ceeeeEecCCCChhheEEEEC-------CCccEEEEecChhh----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC
Confidence 445678899999999999984 36789999876322 2224679999999954 456899999753
Q ss_pred CeEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcC
Q psy15662 145 GGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHL 186 (256)
Q Consensus 145 nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~ 186 (256)
...|-|||+ ..+. .+.-....++.||+||.
T Consensus 87 ~fLlle~l~------~~~~------~~~~~~~lg~~LA~LH~ 116 (288)
T PF03881_consen 87 AFLLLEFLE------MGSP------SPPDWEELGRQLAALHQ 116 (288)
T ss_dssp CEEEEE--------------------CCHHHHHHHHHHHHHH
T ss_pred ceEEEEeec------CCCC------CchhHHHHHHHHHHHhh
Confidence 359999999 4422 23446788999999999
No 36
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=94.68 E-value=0.25 Score=44.66 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=70.3
Q ss_pred eEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccH-------HHHHHHHHHHHhcCCCC-ceeEeeC
Q psy15662 74 VIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESI-------ITDSVIFTLLSERKLGP-TLHGVFP 144 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR-------~~E~~i~~~Ls~~glgP-kl~g~F~ 144 (256)
.+..+.+|--+..|.++. .+..+++.++-+.... +.+..| .+|..++..|...|+.. ..++..+
T Consensus 35 ~~~~l~~~~f~~v~l~~~-------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDT-------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred EEEEecCCCceEEEEEec-------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 345667888899997653 3568999999754311 222233 46777888888888854 3333322
Q ss_pred ----------CeEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 145 ----------GGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 145 ----------nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
...+.||++ |.+|..-...++....+|+..|+.+|...
T Consensus 108 ~~~~~~~~~~~~lvmEyi~------G~tL~~~~~~~~~~~~~i~~~l~~lH~~g 155 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIE------GVELNDMPEISEDVKAKIKASIESLHQHG 155 (232)
T ss_pred ccccccccCCeEEEEEEEC------CccHHHhhhccHHHHHHHHHHHHHHHHcC
Confidence 346999999 99886544445677889999999999864
No 37
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.01 E-value=0.33 Score=44.51 Aligned_cols=87 Identities=11% Similarity=0.075 Sum_probs=57.6
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccH-HHHHHHHHHHHhcCCC-C-ceeEeeC-------Ce---
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI-ITDSVIFTLLSERKLG-P-TLHGVFP-------GG--- 146 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR-~~E~~i~~~Ls~~glg-P-kl~g~F~-------nG--- 146 (256)
.|+.|.+|+|.++ ...++|+.+... .++ .....++..|+++|+. | +++-.-. +|
T Consensus 16 ~~~~~~v~~v~T~-------~G~~~Lk~~~~~------~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~~~~~ 82 (309)
T TIGR02904 16 EQVTGKLFKVYTD-------QGVFALKKLYAD------RNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHGHFLY 82 (309)
T ss_pred ecccCcEEEEEeC-------CCCEEEEEeccc------hHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEECCEEE
Confidence 5568899999863 345777776522 122 3456677899999983 3 3322211 22
Q ss_pred EEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 147 RIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 147 rIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
-+..|++ |. .+...+.-.+.+|+.||+||....
T Consensus 83 ~L~~wi~------G~----~~~~~~~~~~~~~~~LA~lH~~~~ 115 (309)
T TIGR02904 83 YLMPWLD------IE----RNEERNYQHESMFQELALLHRKTV 115 (309)
T ss_pred EEeCCcc------cc----cccCCHHHHHHHHHHHHHHHHhhh
Confidence 5778899 73 345556668899999999999764
No 38
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=93.50 E-value=0.11 Score=50.10 Aligned_cols=97 Identities=16% Similarity=0.196 Sum_probs=68.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEE-------EEecCCCCCccccccHH-HHHHHHHHHHhc--CCCCceeEeeCC--
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVL-------LRIYGQTHGERALESII-TDSVIFTLLSER--KLGPTLHGVFPG-- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vL-------lRIyG~~t~e~~~idR~-~E~~i~~~Ls~~--glgPkl~g~F~n-- 145 (256)
+.||..|.+|+|... ...++|+ +|++|... .+-.+|. .|...++.+++. +.-|++|++.+.
T Consensus 3 igdGnlN~VfrV~~~-----~g~~svIVKQAlp~vRv~g~~w--pl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~ 75 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQ-----EGDRAAIVKQALPYVRVVGESW--PLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMA 75 (370)
T ss_pred CCCCceEEEEEEEcC-----CCCeeEEEEEcCHHHhhcCCCC--CCCccHHHHHHHHHHHhhccCccccCeEEEEccccc
Confidence 479999999999952 2224666 58888665 3667775 488888877663 467899999874
Q ss_pred eEEEEeecCCCCCccccCCC---CCCCChHHHHHHHHHHHhhcC
Q psy15662 146 GRIEEYIPDKETRKARSLKY---SELTDPAISRKIAEKMADIHL 186 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~---~el~dp~i~~~IA~~La~lH~ 186 (256)
-.|-|++++ ...|.. +--..|.++..|+.-|+++|.
T Consensus 76 ~~vMEdL~~-----~~ilR~~Li~g~~~p~~A~~iG~~La~tlf 114 (370)
T TIGR01767 76 VTVMEDLSH-----HKIARKGLIEGENYPHLARHIGEFLAKTLF 114 (370)
T ss_pred eehHhhCcc-----chHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence 488899972 333321 112458899999999999874
No 39
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=93.40 E-value=0.54 Score=41.98 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=64.7
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCC------Ccccc-----ccH-HHHHHHHHHHHhcCC-CCceeEeeC--
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH------GERAL-----ESI-ITDSVIFTLLSERKL-GPTLHGVFP-- 144 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t------~e~~~-----idR-~~E~~i~~~Ls~~gl-gPkl~g~F~-- 144 (256)
.|-.|.+|.|... +..++||.|-... .++.. ..| .+|..++..|...|+ .|+.++...
T Consensus 42 ~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 42 AKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 5778999999863 5789999985321 00000 111 359999999999998 488887642
Q ss_pred C------eEEEEeecCCCCCcc-ccCCC---CCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 145 G------GRIEEYIPDKETRKA-RSLKY---SELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 n------GrIEefi~~~~~~~g-r~Lt~---~el~dp~i~~~IA~~La~lH~~~i 189 (256)
+ ..|.+|++ | .+|.. ..-.......+||..|+.+|...+
T Consensus 115 ~~~~~~~~lV~e~l~------G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI 163 (239)
T PRK01723 115 HGLFYRADILIERIE------GARDLVALLQEAPLSEEQWQAIGQLIARFHDAGV 163 (239)
T ss_pred cCcceeeeEEEEecC------CCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCC
Confidence 1 27889999 5 55531 111134567899999999998653
No 40
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.87 E-value=0.21 Score=44.51 Aligned_cols=62 Identities=24% Similarity=0.344 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCC-CceeEeeCCe--EEEEeecCCCCCccccCCC-CCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 122 TDSVIFTLLSERKLG-PTLHGVFPGG--RIEEYIPDKETRKARSLKY-SELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 122 ~E~~i~~~Ls~~glg-Pkl~g~F~nG--rIEefi~~~~~~~gr~Lt~-~el~dp~i~~~IA~~La~lH~~~i 189 (256)
+|..++..+-+.|+. |-+|.++++. .+-|||+ |..|.. -+...+.+++.|.+.+++||...+
T Consensus 48 ~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~------G~~lkd~l~~~~~~~~r~vG~~vg~lH~~gi 113 (204)
T COG3642 48 REARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE------GELLKDALEEARPDLLREVGRLVGKLHKAGI 113 (204)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC------ChhHHHHHHhcchHHHHHHHHHHHHHHhcCe
Confidence 699999999999995 5566666654 8889999 998872 222257899999999999998654
No 41
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=92.10 E-value=1.5 Score=38.21 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=66.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEee-----CC----eE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVF-----PG----GR 147 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F-----~n----Gr 147 (256)
.+.-|-...+|++... ..+..++++++-... ........|..+++.++++.--+++++.| ++ ..
T Consensus 25 ~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l 97 (286)
T cd06638 25 TIGKGTYGKVFKVLNK-----KNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL 97 (286)
T ss_pred eeccCCCcEEEEEEEC-----CCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence 4455666788998863 346789999876533 12223346888888888777777888876 22 58
Q ss_pred EEEeecCCCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.||++ |.+|.. ..+..+ .+..+|++.|+-+|...+
T Consensus 98 v~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 145 (286)
T cd06638 98 VLELCN------GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT 145 (286)
T ss_pred EEeecC------CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 899999 766531 112211 267788999999997553
No 42
>smart00090 RIO RIO-like kinase.
Probab=91.71 E-value=2.5 Score=37.72 Aligned_cols=62 Identities=18% Similarity=0.082 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccccCCCCCCCC--------hHHHHHHHHHHHhhcCCC
Q psy15662 121 ITDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTD--------PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 121 ~~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~el~d--------p~i~~~IA~~La~lH~~~ 188 (256)
..|..++..|...++ -|++++......|.||++ |..|....+.+ ..++.+|+..++.+|...
T Consensus 98 ~~E~~~L~~L~~~~i~~p~~~~~~~~~lV~E~~~------g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 98 EKEFRNLQRLYEAGVPVPKPIAWRRNVLVMEFIG------GDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHHHHHHHHhcCCCCCeeeEecCceEEEEEec------CCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999987766 478887767789999999 87664322221 258889999999999866
No 43
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=90.42 E-value=1.3 Score=40.68 Aligned_cols=101 Identities=17% Similarity=0.234 Sum_probs=66.0
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
..+..|--..+|++... ..+..|.++++-....+........|..+++.+..-++ .++++.|.. ..|.||
T Consensus 80 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHR-----PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNV-VKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred hhccCCCCeEEEEEEEC-----CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCc-ceeeeEeccCCeEEEEEec
Confidence 34555666788998763 34678999988544311122233468888877765444 457777763 378899
Q ss_pred ecCCCCCccccCCCCCCCCh----HHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLKYSELTDP----AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt~~el~dp----~i~~~IA~~La~lH~~~ 188 (256)
++ +..|......+. .+..+|+..|+.+|...
T Consensus 154 ~~------~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 188 (353)
T PLN00034 154 MD------GGSLEGTHIADEQFLADVARQILSGIAYLHRRH 188 (353)
T ss_pred CC------CCcccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 99 666654433332 47778889999999865
No 44
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=90.19 E-value=1 Score=39.63 Aligned_cols=61 Identities=8% Similarity=0.082 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccccCCCCCCCC--------hHHHHHHHHHHHhh-cCCC
Q psy15662 122 TDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKARSLKYSELTD--------PAISRKIAEKMADI-HLMQ 188 (256)
Q Consensus 122 ~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~el~d--------p~i~~~IA~~La~l-H~~~ 188 (256)
.|..+++.|.+.|+ .|++|+...+..|-|||. +..+....+++ ..+..+++..|+.+ |...
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig------~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g 145 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVLKKHVLVMSFIG------DDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN 145 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEecCCEEEEEEcC------CCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 79999999999997 789999999999999999 54222211221 34567888899888 7643
No 45
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=89.43 E-value=0.28 Score=45.88 Aligned_cols=23 Identities=30% Similarity=0.449 Sum_probs=20.4
Q ss_pred ccccceEEeecCccccceeEEEe
Q psy15662 69 IITDSVIFTLLGGLTNMLYHVTL 91 (256)
Q Consensus 69 ~~~~~~i~~l~GGlTN~~ykv~~ 91 (256)
+..++++++++|||||.+|+|+.
T Consensus 13 ~~~~i~i~~l~gGlTN~~~~v~~ 35 (330)
T PLN02421 13 DDSDFSVERISGGITNLLLKVSV 35 (330)
T ss_pred CcCceEEEEeCCcccceEEEEEe
Confidence 34689999999999999999985
No 46
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=89.29 E-value=1.2 Score=35.50 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=64.6
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
..|-.+.+|++... ..+..++++++..............|..+++.+...++ +++++.+.. ..+.+|++
T Consensus 2 ~~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~~~e~~~- 74 (215)
T cd00180 2 GEGGFGTVYLARDK-----KTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-VKLYGVFEDENHLYLVMEYCE- 74 (215)
T ss_pred CcCCceEEEEEEec-----CCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-eeEeeeeecCCeEEEEEecCC-
Confidence 45777899999874 34788999999876510012345578888888876444 346666653 57888888
Q ss_pred CCCCccccCCCC------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKYS------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~~------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|..- .+.. ..+..++++.++.+|...+
T Consensus 75 -----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 113 (215)
T cd00180 75 -----GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI 113 (215)
T ss_pred -----CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 6654421 1111 2467788889999998653
No 47
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=89.10 E-value=1.7 Score=37.79 Aligned_cols=101 Identities=17% Similarity=0.246 Sum_probs=61.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHH--hcCCCCceeEeeCCe----EEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLS--ERKLGPTLHGVFPGG----RIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls--~~glgPkl~g~F~nG----rIEef 151 (256)
+..|--..+|++... .....|+++++...+......+-..|..+++.+. .+.--.++++.|..+ .+.+|
T Consensus 9 l~~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06917 9 IGRGAYGAVYRGKHV-----PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEY 83 (277)
T ss_pred eeccCCceEEEEEEc-----CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEec
Confidence 445566788888753 3467899998865431122223345777777776 233344577776543 78888
Q ss_pred ecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 84 ~~------~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i 122 (277)
T cd06917 84 AE------GGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGV 122 (277)
T ss_pred CC------CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 88 554421 11221 2366788999999998653
No 48
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=89.06 E-value=1.8 Score=37.12 Aligned_cols=99 Identities=18% Similarity=0.142 Sum_probs=64.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----------Gr 147 (256)
+..|-...+|++... .....+.+|++-... ....+-..|..+++.+.++.--+++++.|.. ..
T Consensus 14 l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~l 86 (275)
T cd06608 14 IGEGTYGKVYKARHK-----KTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWL 86 (275)
T ss_pred ecCCCCeEEEEEEEC-----CCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEE
Confidence 333444567888763 346789999986554 2223345688888888777777889998732 47
Q ss_pred EEEeecCCCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|++ +.+|.. ..+... .+..+++..|+.+|+..+
T Consensus 87 v~e~~~------~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i 134 (275)
T cd06608 87 VMELCG------GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV 134 (275)
T ss_pred EEEcCC------CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 889998 544321 122222 367788999999998654
No 49
>KOG3087|consensus
Probab=88.45 E-value=1.6 Score=39.31 Aligned_cols=62 Identities=16% Similarity=0.243 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhcCC-CCceeEeeC--CeEEEEeecCCCCCccc---------cCCCC--CCCChHHHHHHHHHHHhhcCC
Q psy15662 122 TDSVIFTLLSERKL-GPTLHGVFP--GGRIEEYIPDKETRKAR---------SLKYS--ELTDPAISRKIAEKMADIHLM 187 (256)
Q Consensus 122 ~E~~i~~~Ls~~gl-gPkl~g~F~--nGrIEefi~~~~~~~gr---------~Lt~~--el~dp~i~~~IA~~La~lH~~ 187 (256)
+|...+..+...|| +|.+|.... |-.+-|||+ |- ++.++ +..-.++.+.|.+.+++||..
T Consensus 59 ~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~------g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n 132 (229)
T KOG3087|consen 59 QEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFID------GASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN 132 (229)
T ss_pred HHHHHHHHHHHhCCCCceEEEEecCCCeEEEEecc------chhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence 68888888888898 677777665 347889999 62 22222 222236899999999999987
Q ss_pred CC
Q psy15662 188 QI 189 (256)
Q Consensus 188 ~i 189 (256)
++
T Consensus 133 di 134 (229)
T KOG3087|consen 133 DI 134 (229)
T ss_pred Ce
Confidence 64
No 50
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=88.44 E-value=6.3 Score=32.45 Aligned_cols=93 Identities=17% Similarity=0.106 Sum_probs=59.7
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccH-------------------------HHHHHHHHHHHhcC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI-------------------------ITDSVIFTLLSERK 134 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR-------------------------~~E~~i~~~Ls~~g 134 (256)
-|-...+|++... .+..|+++++-.... ...++ ..|..++..+...+
T Consensus 7 ~G~~g~Vy~a~~~------~~~~vavKv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 78 (187)
T cd05119 7 TGKEADVYLALDG------DGEPVAVKIYRTGRT--SFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG 78 (187)
T ss_pred cccceeEEEEECC------CCCEEEEEEEecCcc--chhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC
Confidence 3555667877642 367788988765321 11111 24666666666665
Q ss_pred -CCCceeEeeCCeEEEEeecCCCCCcc-----ccCCCCCC--CChHHHHHHHHHHHhhcC
Q psy15662 135 -LGPTLHGVFPGGRIEEYIPDKETRKA-----RSLKYSEL--TDPAISRKIAEKMADIHL 186 (256)
Q Consensus 135 -lgPkl~g~F~nGrIEefi~~~~~~~g-----r~Lt~~el--~dp~i~~~IA~~La~lH~ 186 (256)
..|+.++......+.+|++ | ..|..... .-..+..+++..+..+|.
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~------g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~ 132 (187)
T cd05119 79 VPVPKPIDLNRHVLVMEFIG------GDGIPAPRLKDVRLLEDPEELYDQILELMRKLYR 132 (187)
T ss_pred CCCCceEecCCCEEEEEEeC------CCCccChhhhhhhhcccHHHHHHHHHHHHHHHhh
Confidence 4889999888999999999 7 33332111 113577788888888997
No 51
>PTZ00384 choline kinase; Provisional
Probab=87.77 E-value=0.47 Score=45.74 Aligned_cols=24 Identities=29% Similarity=0.296 Sum_probs=21.0
Q ss_pred ccccceEEeecCccccceeEEEee
Q psy15662 69 IITDSVIFTLLGGLTNMLYHVTLL 92 (256)
Q Consensus 69 ~~~~~~i~~l~GGlTN~~ykv~~~ 92 (256)
+.+.++|++++|||||.+|+|+..
T Consensus 49 ~~~~i~i~~l~gGLTN~l~~v~~~ 72 (383)
T PTZ00384 49 NPEFIEIKKMNNGITNQVYQATLV 72 (383)
T ss_pred CcccEEEEEeCCcccceEEEEEec
Confidence 456789999999999999999863
No 52
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=87.71 E-value=5.6 Score=34.93 Aligned_cols=105 Identities=19% Similarity=0.117 Sum_probs=65.7
Q ss_pred cceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC------
Q psy15662 72 DSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP------ 144 (256)
Q Consensus 72 ~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~------ 144 (256)
++++. .+..|....+|++... ..+..+.+++..... .....-..|..+++.+.++.--+++++.|.
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~-----~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNK-----KDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEEC-----CCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence 34343 3445666788998863 346788888876533 122233457777777766666677888763
Q ss_pred ---CeEEEEeecCCCCCccccCC---------CCCCCChH---HHHHHHHHHHhhcCCCC
Q psy15662 145 ---GGRIEEYIPDKETRKARSLK---------YSELTDPA---ISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 ---nGrIEefi~~~~~~~gr~Lt---------~~el~dp~---i~~~IA~~La~lH~~~i 189 (256)
-..|.||++ |.+|. ...+..+. +..+|+..|+.+|...+
T Consensus 96 ~~~~~lv~ey~~------~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 149 (291)
T cd06639 96 GGQLWLVLELCN------GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI 149 (291)
T ss_pred CCeeEEEEEECC------CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 147889998 65542 12233332 56678889999998653
No 53
>PTZ00296 choline kinase; Provisional
Probab=87.32 E-value=0.45 Score=46.76 Aligned_cols=24 Identities=38% Similarity=0.526 Sum_probs=21.0
Q ss_pred ccccceEEeecCccccceeEEEee
Q psy15662 69 IITDSVIFTLLGGLTNMLYHVTLL 92 (256)
Q Consensus 69 ~~~~~~i~~l~GGlTN~~ykv~~~ 92 (256)
..+++.|++++|||||.+|+|++.
T Consensus 104 ~~~~I~i~~l~gGlTN~~f~v~~~ 127 (442)
T PTZ00296 104 TEDDVRVNQILSGLTNQLFEVSLK 127 (442)
T ss_pred CcccEEEEEecCcccCceEEEEec
Confidence 346789999999999999999974
No 54
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.88 E-value=3.5 Score=38.33 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=67.9
Q ss_pred eEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcC--CCCceeEeeCC----eE
Q psy15662 74 VIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERK--LGPTLHGVFPG----GR 147 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~g--lgPkl~g~F~n----Gr 147 (256)
+...++||--|..|+|... ..++.+++.-..- .---..|..-+..|++.+ --|++|+.-.. ..
T Consensus 20 er~~v~gG~inea~~v~dg-------~~~~FvK~n~~~~----~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~syl 88 (286)
T COG3001 20 EREEVSGGDINEAWRLRDG-------TDPFFVKCNQREQ----LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYL 88 (286)
T ss_pred cccccCCccccceeEeecC-------CcceEEEecchhh----HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEE
Confidence 3456899999999999853 4667777754321 122347888999999988 47899988652 48
Q ss_pred EEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
|.+||+ -.++. +.-..+..+.||++|...-
T Consensus 89 Vle~L~------~~~~d------~~~~~~~GqqLA~LH~~~~ 118 (286)
T COG3001 89 VLEYLP------TGPLD------AHSAFILGQQLARLHQWGG 118 (286)
T ss_pred EEeecc------CCCCC------chhHHHHHHHHHHHHhhcC
Confidence 999999 55553 4446678999999998643
No 55
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=86.72 E-value=0.44 Score=41.20 Aligned_cols=21 Identities=43% Similarity=0.643 Sum_probs=18.6
Q ss_pred EEEEEeccceeeeeEEEEecC
Q psy15662 22 ICVKRMSGGLTNMLYHVTLLQ 42 (256)
Q Consensus 22 i~v~~isggltN~l~~v~~~~ 42 (256)
|.|++++||+||.+|+|+.+.
T Consensus 1 ~~i~~l~gG~tN~~~~v~~~~ 21 (235)
T cd05157 1 ITFKRFTGGITNKLVKVSNKE 21 (235)
T ss_pred CeEEEcCCcccceEEEEEcCC
Confidence 579999999999999998763
No 56
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=86.55 E-value=2.4 Score=37.70 Aligned_cols=85 Identities=21% Similarity=0.215 Sum_probs=58.8
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCcc
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKA 160 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~g 160 (256)
|-|-..|.+... +..+.+.+--.. +..-+-..|..++++|+-.|++|++|.+..+-...|||+ |
T Consensus 33 G~~s~Vyl~~~~-------~~~~a~Kvrr~d---s~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~------G 96 (201)
T COG2112 33 GTTSVVYLGEWR-------GGEVALKVRRRD---SPRRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYID------G 96 (201)
T ss_pred ccccEEEEeecc-------CceEEEEEecCC---cchhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhc------C
Confidence 445556666542 346666664433 244566789999999999999999999976654599999 9
Q ss_pred ccCCCCCC-CChHHHHHHHHHH
Q psy15662 161 RSLKYSEL-TDPAISRKIAEKM 181 (256)
Q Consensus 161 r~Lt~~el-~dp~i~~~IA~~L 181 (256)
++|..-.. .++.-...++++-
T Consensus 97 ~~L~~~~~~~~rk~l~~vlE~a 118 (201)
T COG2112 97 RPLGKLEIGGDRKHLLRVLEKA 118 (201)
T ss_pred cchhhhhhcccHHHHHHHHHHH
Confidence 99875443 2566566666553
No 57
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=86.50 E-value=7.9 Score=32.69 Aligned_cols=100 Identities=13% Similarity=0.031 Sum_probs=64.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--c-------------------ccccHHHHHHHHHHHHhcC-
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--R-------------------ALESIITDSVIFTLLSERK- 134 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~-------------------~~idR~~E~~i~~~Ls~~g- 134 (256)
++..|-.-.+|++... ++..|+++++-..... . .-.....|..++..+...+
T Consensus 22 ~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 22 QIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred ccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 3555666778887642 3677888875322100 0 0011345777777777665
Q ss_pred CCCceeEeeCCeEEEEeecCCCCCccccCCCCC--CCChHHHHHHHHHHHhhcCCC
Q psy15662 135 LGPTLHGVFPGGRIEEYIPDKETRKARSLKYSE--LTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 135 lgPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~e--l~dp~i~~~IA~~La~lH~~~ 188 (256)
.-|++++......+.||++ |.+|..-. -....+..+|+..+..+|...
T Consensus 96 ~v~~~~~~~~~~lv~e~~~------g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~g 145 (198)
T cd05144 96 PVPKPIDWNRHAVVMEYID------GVELYRVRVLEDPEEVLDEILEEIVKAYKHG 145 (198)
T ss_pred CCCceeecCCceEEEEEeC------CcchhhccccccHHHHHHHHHHHHHHHHHCC
Confidence 4677887777889999999 87775322 122457789999999999855
No 58
>PRK10271 thiK thiamine kinase; Provisional
Probab=86.26 E-value=1 Score=39.56 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=39.9
Q ss_pred EEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHhh
Q psy15662 148 IEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTLY 210 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l~ 210 (256)
+-+|++ |.+++.. .....+|..++++|..+. ...|..+|+.|.+|..++.
T Consensus 2 lv~Wl~------Ge~~~~~-----~~~~~La~~l~~LH~~p~--~~~~~~l~~~i~~Yw~~l~ 51 (188)
T PRK10271 2 AVDYLP------GEVKSYL-----PDTNELAGLLYHLHQQPR--FGWRITLLPLLEQYWQQSD 51 (188)
T ss_pred cccccC------CCcCCCc-----cCHHHHHHHHHHHhcCCC--CCCCCCHHHHHHHHHHHhc
Confidence 568999 9999744 256789999999999663 3344579999999999884
No 59
>PRK09188 serine/threonine protein kinase; Provisional
Probab=85.56 E-value=4.2 Score=39.05 Aligned_cols=101 Identities=13% Similarity=0.067 Sum_probs=67.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCC----CccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH----GERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t----~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~ 153 (256)
+.-|-.-.+|++... ......+.+++.-... .......-.+|..+++.|...++-|+++.......|.||++
T Consensus 26 IG~G~fg~Vy~a~~~----~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~LVmE~~~ 101 (365)
T PRK09188 26 LKRDVFSTVERGYFA----GDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGLVRGWTE 101 (365)
T ss_pred EeecCcEEEEEEEEc----CCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEEEEEccC
Confidence 334556678888753 1233445666532221 00112234589999999999999999988777789999999
Q ss_pred CCCCCccccCCCCC-CCChHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKYSE-LTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~~e-l~dp~i~~~IA~~La~lH~~~ 188 (256)
|.+|.... .....+..+|++.|+.+|+..
T Consensus 102 ------G~~L~~~~~~~~~~~~~~i~~aL~~lH~~g 131 (365)
T PRK09188 102 ------GVPLHLARPHGDPAWFRSAHRALRDLHRAG 131 (365)
T ss_pred ------CCCHHHhCccchHHHHHHHHHHHHHHHHCC
Confidence 88875221 123578899999999999854
No 60
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=85.00 E-value=2 Score=37.59 Aligned_cols=101 Identities=13% Similarity=0.141 Sum_probs=60.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..|+++++..............|..+++.+.. ..-+++++.|.. ..|.||+
T Consensus 11 ~lg~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 11 RIGKGSFGEVFKGIDN-----RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hcccCCCeEEEEEEEc-----cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEEEEecC
Confidence 3445556678888753 34678999998754311223334456666666643 334567777652 5888999
Q ss_pred cCCCCCccccCC----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|. ...+.. ..+..+++..|+.+|+..+
T Consensus 85 ~------~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06640 85 G------GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 122 (277)
T ss_pred C------CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8 65542 111222 2456678888999998654
No 61
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=84.90 E-value=10 Score=32.03 Aligned_cols=60 Identities=13% Similarity=0.046 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccccCC-----CCCCC---ChHHHHHHHHHHHhhcC
Q psy15662 121 ITDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKARSLK-----YSELT---DPAISRKIAEKMADIHL 186 (256)
Q Consensus 121 ~~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr~Lt-----~~el~---dp~i~~~IA~~La~lH~ 186 (256)
..|..++..+...|+ .|..+....+..|-||++ |..+. ...+. -..+..+++..|..+|.
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~~~~~~~~lVmE~~~------g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~ 135 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEPILLKKNVLVMEFIG------DDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ 135 (190)
T ss_pred HHHHHHHHHHHhCCCCCceEEEecCCEEEEEEec------CCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 367888888888886 477777777889999999 65332 11221 13567888999999997
No 62
>PRK14879 serine/threonine protein kinase; Provisional
Probab=84.81 E-value=4.9 Score=33.80 Aligned_cols=98 Identities=19% Similarity=0.179 Sum_probs=60.2
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCC-cccc------ccHHHHHHHHHHHHhcCCC-CceeEeeC--CeEE
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERAL------ESIITDSVIFTLLSERKLG-PTLHGVFP--GGRI 148 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~------idR~~E~~i~~~Ls~~glg-Pkl~g~F~--nGrI 148 (256)
.-|-+-.+|++... +..+++++.-.... ...+ .....|..++..+...++. |.+++... ...+
T Consensus 5 ~~G~~~~vy~~~~~-------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 77 (211)
T PRK14879 5 KRGAEAEIYLGDFL-------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIV 77 (211)
T ss_pred ccCceEEEEEEeeC-------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEE
Confidence 34556667877642 45677776443210 0001 1123577888888887775 55554433 3589
Q ss_pred EEeecCCCCCccccCCCCCC----CChHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARSLKYSEL----TDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~Lt~~el----~dp~i~~~IA~~La~lH~~~i 189 (256)
.+|++ |.+|...-- ....+...|+..|+.+|...+
T Consensus 78 ~e~~~------G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 116 (211)
T PRK14879 78 MEYIE------GEPLKDLINSNGMEELELSREIGRLVGKLHSAGI 116 (211)
T ss_pred EEEeC------CcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999 887752211 113788899999999998643
No 63
>PLN02236 choline kinase
Probab=84.67 E-value=0.68 Score=43.61 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=20.1
Q ss_pred ccccceEEeecCccccceeEEEe
Q psy15662 69 IITDSVIFTLLGGLTNMLYHVTL 91 (256)
Q Consensus 69 ~~~~~~i~~l~GGlTN~~ykv~~ 91 (256)
..+.+.+.+++||+||.+|+|+.
T Consensus 35 ~~~~~~i~~l~gGlTN~~y~v~~ 57 (344)
T PLN02236 35 DDEALQVIPLKGAMTNEVFQIKW 57 (344)
T ss_pred CcCcEEEEEcCCcccceeEEEEe
Confidence 34678999999999999999985
No 64
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=84.39 E-value=5.3 Score=36.52 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=72.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHH---HHHHHHHhcCCCCceeEee--CCeEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDS---VIFTLLSERKLGPTLHGVF--PGGRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~---~i~~~Ls~~glgPkl~g~F--~nGrIEefi 152 (256)
+.+|-++.+++|.. .++...+++++.+.. . -..|. ..++...-+|. .++|... .+-++-|++
T Consensus 10 ~~~g~~s~V~pv~~------~dG~~avLKl~~p~~---~---~~~E~~g~~~L~~w~G~Ga-Vrll~~d~~~~AlLLErl 76 (253)
T PF04655_consen 10 PAHGSSSLVVPVRR------ADGTPAVLKLAPPHA---E---AEHEARGEAALRWWNGRGA-VRLLAADPERGALLLERL 76 (253)
T ss_pred CCCCcceEEEEEEc------CCCCeEEEEecCCcc---c---chhhhhHHhHhheeCCCCc-eeeeccccccchhhhhhc
Confidence 46788999999984 347899999988764 1 12333 44665555553 6999998 456888888
Q ss_pred cCCCCCccccCCCCCC--CChHHHHHHHHHHHhhcCCCCCCCCCcccHHHHHHHHHHHh
Q psy15662 153 PDKETRKARSLKYSEL--TDPAISRKIAEKMADIHLMQIPVVKEPTWLWDTIQRWLNTL 209 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~el--~dp~i~~~IA~~La~lH~~~ip~~k~P~~l~~~i~kwl~~l 209 (256)
. +|++|..-.. .+.+-...+|..|+++|... + ...|. -+..+..|+..+
T Consensus 77 ~-----~g~~L~~~~~~g~d~~a~~i~a~l~~~L~~~~-~-~~~p~-~l~~l~~~~~~l 127 (253)
T PF04655_consen 77 D-----PGRSLASLPREGDDDEATRIAAGLLRRLHRPA-P-EPLPS-GLPPLADWFARL 127 (253)
T ss_pred c-----CCCchhhcccccCchHHHHHHHHHHHHHhCCC-C-CCCCc-cchhHHHHHHHH
Confidence 3 2899963332 26677889999999999743 2 12232 144455555443
No 65
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=83.57 E-value=5.5 Score=34.47 Aligned_cols=101 Identities=9% Similarity=0.012 Sum_probs=61.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEef 151 (256)
+..|....+|++... ..+..|.+|++-..........+..|..++..+.++.--.++++.|.. ..|.||
T Consensus 7 lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~ 81 (282)
T cd07831 7 IGEGTFSEVLKAQSR-----KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL 81 (282)
T ss_pred ccccccceEEEEEEc-----CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence 444556788998863 346788899876532112223445677777777665555668887642 367777
Q ss_pred ecCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+ +..+. ...+.. -.+..+|+..|+.+|...+
T Consensus 82 ~~------~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 82 MD------MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred CC------ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 76 43221 111222 2366788888999998653
No 66
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=83.50 E-value=5.1 Score=34.71 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=65.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++.............|+++++.....+.....-..|..+++.+...++ .++++.|.. ..+.||++
T Consensus 13 lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~ 91 (275)
T cd05046 13 LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-VRLLGLCREAEPHYMILEYTD 91 (275)
T ss_pred ecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-eeeEEEECCCCcceEEEEecC
Confidence 4445557888888643221234567889988765421112234568888888865555 578888763 58889988
Q ss_pred CCCCCccccCCC-----C---------CCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY-----S---------ELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~-----~---------el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. . .+... .+..+|+..|+-+|...+
T Consensus 92 ------~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i 138 (275)
T cd05046 92 ------LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF 138 (275)
T ss_pred ------CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc
Confidence 544431 0 12232 366789999999998654
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=82.75 E-value=3.6 Score=37.16 Aligned_cols=98 Identities=12% Similarity=0.181 Sum_probs=61.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|---.+|++... ..+..|.++++-.... +........|..++..+..+..-.++++.|.. ..|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~- 79 (321)
T cd05591 6 GSFGKVMLAELK-----GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN- 79 (321)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC-
Confidence 344567888753 3467889998764320 01222234577777766677777889998864 48889998
Q ss_pred CCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. ..+..+|+..|+.+|...+
T Consensus 80 -----~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 117 (321)
T cd05591 80 -----GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGV 117 (321)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55442 111211 2367789999999998653
No 68
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=82.61 E-value=10 Score=33.36 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=62.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC---C---eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP---G---GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---n---GrIEe 150 (256)
.+..|..=.+|++... .....+.++++......+....-.+|..+++.+...++ .++++.|. + ..|.|
T Consensus 8 ~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 8 RLGEGAGGSVTKCRLK-----NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI-VKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred EeccCCceEEEEEEEC-----CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCe-eeeeeEEEccCCCeEEEEEE
Confidence 4444555567888863 34678899988754411123334568888887765555 45777763 1 36789
Q ss_pred eecCCCCCccccCCC---------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY---------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~---------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 82 ~~~------~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i 126 (287)
T cd06621 82 YCE------GGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI 126 (287)
T ss_pred ecC------CCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 998 655521 11211 2477889999999997653
No 69
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=82.56 E-value=6 Score=33.88 Aligned_cols=97 Identities=20% Similarity=0.159 Sum_probs=61.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ....|.++.+.... ....+-..|..+++.+.. .--+++++.|.. ..|.+|++
T Consensus 14 ig~g~~~~v~~~~~~------~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 14 LGAGQFGEVWMGTWN------GTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRH-DKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred eccCcceEEEEEEEc------CCceEEEEEecCCc--cCHHHHHHHHHHHhhCCC-CCEeeeeeeeecCCceEEEEeccC
Confidence 444666788888753 24678898887654 223344567777777764 344677887764 58888888
Q ss_pred CCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 85 ------~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i 124 (261)
T cd05034 85 ------KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY 124 (261)
T ss_pred ------CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 655521 11222 2466788888899998654
No 70
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=82.50 E-value=5.9 Score=33.01 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=62.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ..+..++++++..... ........|..+++.+. +.--+++++.|.. ..+.+|++
T Consensus 8 l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 8 IGKGGFGEVYKARHK-----RTGKEVAIKVIKLESK-EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred eccCCceEEEEEEEC-----CCCcEEEEEEecccch-hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEecCC
Confidence 444556688888863 3467899999876541 13334456777777766 3344567777753 47788888
Q ss_pred CCCCCccccCCCC------CCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKYS------ELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~~------el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|..- .+... .+..+|+..|+.+|...+
T Consensus 81 ------~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 119 (253)
T cd05122 81 ------GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119 (253)
T ss_pred ------CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence 6665421 12222 367788999999998543
No 71
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=82.24 E-value=4.6 Score=34.42 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=63.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|....+|++... .....+.+|++..... ........|..+++.+..-++- ++++.|.. ..+.||+
T Consensus 10 ~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 10 RIGSGTYGDVYKARDI-----ATGELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIV-AYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred EecCCCceEEEEeEec-----CCCCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChh-ceEEEEEeCCEEEEEEeCC
Confidence 4556667788888763 3456799999876552 2233345677777777555554 47777653 3577888
Q ss_pred cCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 83 ~------~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i 122 (262)
T cd06613 83 G------GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK 122 (262)
T ss_pred C------CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 7 554431 11222 2367788999999998654
No 72
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=82.09 E-value=12 Score=31.97 Aligned_cols=101 Identities=11% Similarity=0.127 Sum_probs=61.0
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..++++.+-.........+...|..+++.+...++ .++++.|.. ..+.+|+
T Consensus 7 ~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 7 VVGEGSFGRALLVQHV-----NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-VAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred EeeccCCeEEEEEEEc-----CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEECCEEEEEEeeC
Confidence 4445566778888763 34678899987533211223334467777777655554 556777653 4788888
Q ss_pred cCCCCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +-+|.. ..+..+ .+..+||..|+.+|...+
T Consensus 81 ~------~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 121 (255)
T cd08219 81 D------GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV 121 (255)
T ss_pred C------CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 8 433211 112222 357789999999998654
No 73
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=82.05 E-value=2.1 Score=37.06 Aligned_cols=64 Identities=20% Similarity=0.157 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhcCC-CCceeEeeCC--------eEEEEeecCCCCCccccCCC--------CCCCChHHHHHHHHHHHh
Q psy15662 121 ITDSVIFTLLSERKL-GPTLHGVFPG--------GRIEEYIPDKETRKARSLKY--------SELTDPAISRKIAEKMAD 183 (256)
Q Consensus 121 ~~E~~i~~~Ls~~gl-gPkl~g~F~n--------GrIEefi~~~~~~~gr~Lt~--------~el~dp~i~~~IA~~La~ 183 (256)
..|..++..|.+.|+ .|+.+++... ..|.|+|+ +..+|.. +.-....+.+++|+.+++
T Consensus 59 ~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~-----~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 59 KREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALP-----GAQDLRDLLQQWEQLDPSQRRELLRALARLIAK 133 (206)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCC-----CcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence 479999999999999 4777777653 36778888 2344432 122346789999999999
Q ss_pred hcCCCC
Q psy15662 184 IHLMQI 189 (256)
Q Consensus 184 lH~~~i 189 (256)
||...+
T Consensus 134 lH~~gi 139 (206)
T PF06293_consen 134 LHDAGI 139 (206)
T ss_pred HHHCcC
Confidence 998654
No 74
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=81.06 E-value=7.3 Score=33.62 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=63.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEe 150 (256)
.+..|--..+|++...... ......|.++++..........+-..|..+++.+...++ +++++++.. ..+.|
T Consensus 11 ~ig~g~~~~v~~~~~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-~~~~~~~~~~~~~~~~lv~e 88 (284)
T cd05038 11 QLGEGHFGKVELCRYDPLG-DNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-VKYKGVCEKPGGRSLRLIME 88 (284)
T ss_pred eeccCCCeeEEEeeecCCC-CCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-heEEeeeecCCCCceEEEEe
Confidence 3444556788988864211 234678999998766510013334567777777754444 457776643 58889
Q ss_pred eecCCCCCccccCCCC------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKYS------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~~------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|..- .+.. ..+..+++..|+.+|...+
T Consensus 89 ~~~------~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 130 (284)
T cd05038 89 YLP------SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY 130 (284)
T ss_pred cCC------CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 998 5544210 1111 3467788889999998653
No 75
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=80.79 E-value=4.4 Score=34.79 Aligned_cols=98 Identities=13% Similarity=0.176 Sum_probs=57.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|.-..+|++... ..+..|.++++-.... .....+...|..+.....++.--+++++.|.. ..|.||++
T Consensus 7 g~~~~v~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~- 80 (260)
T cd05611 7 GAFGSVYLAKKR-----STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN- 80 (260)
T ss_pred CCCeeEEEEEec-----CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC-
Confidence 444567887753 3467888998743220 01112223344444333345556778888864 48899998
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+.. ..+..+|+..|..+|...+
T Consensus 81 -----~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i 118 (260)
T cd05611 81 -----GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGI 118 (260)
T ss_pred -----CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 654431 11111 2467789999999998653
No 76
>PRK12274 serine/threonine protein kinase; Provisional
Probab=80.65 E-value=3.3 Score=37.35 Aligned_cols=83 Identities=12% Similarity=0.064 Sum_probs=59.1
Q ss_pred CCceEEEEecCCCCCccccc--c--H-HHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCccccCCCCCC-CChH
Q psy15662 99 EPSEVLLRIYGQTHGERALE--S--I-ITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRKARSLKYSEL-TDPA 172 (256)
Q Consensus 99 ~~~~vLlRIyG~~t~e~~~i--d--R-~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~el-~dp~ 172 (256)
...+++.|-.+... ..+- . + .+|..+++.|....--|++++......+.+||+ |.+|...-. .+..
T Consensus 24 ~~~k~~~~~l~~~~--~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~------G~~L~~~~~~~~~~ 95 (218)
T PRK12274 24 GERKFVRRDLSAAP--WWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLA------GAAMYQRPPRGDLA 95 (218)
T ss_pred CCceeeecccccch--hhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeec------CccHHhhhhhhhHH
Confidence 35677777666544 2111 1 1 469999999987777899999876789999999 988853221 2346
Q ss_pred HHHHHHHHHHhhcCCCC
Q psy15662 173 ISRKIAEKMADIHLMQI 189 (256)
Q Consensus 173 i~~~IA~~La~lH~~~i 189 (256)
+..+|++.|..+|...+
T Consensus 96 ~~~qi~~~L~~lH~~GI 112 (218)
T PRK12274 96 YFRAARRLLQQLHRCGV 112 (218)
T ss_pred HHHHHHHHHHHHHHCcC
Confidence 78899999999998543
No 77
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=80.48 E-value=21 Score=30.43 Aligned_cols=61 Identities=10% Similarity=0.051 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccccCCCC-----CCCCh---HHHHHHHHHHHhh-cCCC
Q psy15662 122 TDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKARSLKYS-----ELTDP---AISRKIAEKMADI-HLMQ 188 (256)
Q Consensus 122 ~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr~Lt~~-----el~dp---~i~~~IA~~La~l-H~~~ 188 (256)
.|..++..|...|+ -|..+....+..|-||++ |..+... .+... .+..+|+..|+.+ |...
T Consensus 68 ~E~~~l~~l~~~~v~~p~~~~~~~~~iVmE~i~------g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g 138 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEPILLKSHVLVMEFIG------DDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCR 138 (190)
T ss_pred HHHHHHHHHHHCCCCCCcEEEecCCEEEEEEeC------CCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 48889999987775 466666666789999999 6544321 12222 3567788889988 6643
No 78
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=80.36 E-value=5.2 Score=36.17 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=63.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|---.+|++... .....|.++++-.... +........|..++..+....+-+++++.|.. ..|.|
T Consensus 7 ~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 7 VLGKGSFGKVMLAERK-----GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred EEeeccCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 3444556678888753 3467899998764320 01222334566777777666666778888753 37888
Q ss_pred eecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|. ...+..+ .+..+|+..|+-+|...+
T Consensus 82 ~~~------~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 122 (324)
T cd05587 82 YVN------GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI 122 (324)
T ss_pred CCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 988 65552 1112222 356788899999998653
No 79
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=80.13 E-value=3.7 Score=37.10 Aligned_cols=95 Identities=15% Similarity=0.230 Sum_probs=61.0
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKET 157 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~ 157 (256)
..+|++... .....|.++++-.... ++.......|..+++.+..+..-+++++.|.. ..|.||++
T Consensus 9 g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~---- 79 (318)
T cd05570 9 GKVLLAELK-----GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN---- 79 (318)
T ss_pred eEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC----
Confidence 467888763 3467888888764320 01222334677777777777777889998864 47889998
Q ss_pred CccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+..+ .+..+|+..|+-+|+..+
T Consensus 80 --~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 117 (318)
T cd05570 80 --GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI 117 (318)
T ss_pred --CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 555421 122222 356789999999998654
No 80
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=80.11 E-value=8.7 Score=32.68 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=60.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-...+|++... ..+..|+++++-.............|..++..+. +.--+++++.|.. ..|.+|++
T Consensus 12 g~~~~v~~~~~~-----~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~--- 82 (264)
T cd06623 12 GSSGVVYKVRHK-----PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVLEYMD--- 82 (264)
T ss_pred cCCeEEEEEEEc-----CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEEEecC---
Confidence 444567888763 3578899998866541011223345666677666 3344567777764 47888998
Q ss_pred CCccccCCC-----CCCCC---hHHHHHHHHHHHhhcC-CC
Q psy15662 157 TRKARSLKY-----SELTD---PAISRKIAEKMADIHL-MQ 188 (256)
Q Consensus 157 ~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~-~~ 188 (256)
+.+|.. ..+.. -.+..+||+.|+.+|. ..
T Consensus 83 ---~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~ 120 (264)
T cd06623 83 ---GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH 120 (264)
T ss_pred ---CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 665541 11111 2467789999999998 54
No 81
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=79.68 E-value=5.6 Score=34.49 Aligned_cols=100 Identities=16% Similarity=0.138 Sum_probs=60.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-.+.+|++... .....|+++++..............|..+++.+..-++ .++++.|.+ ..|.||++
T Consensus 9 lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 9 IGKGSFGEVYKAIDK-----RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYI-TKYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hcCCCCeEEEEEEEC-----CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCe-eeeeEEEEECCeEEEEEEeeC
Confidence 334556788888763 35678999998654311223344567777777764444 346666654 37888988
Q ss_pred CCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 83 ------~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i 119 (274)
T cd06609 83 ------GGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGK 119 (274)
T ss_pred ------CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 554321 11111 2466778888888998653
No 82
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=79.11 E-value=1.4 Score=39.83 Aligned_cols=19 Identities=42% Similarity=0.681 Sum_probs=17.2
Q ss_pred eEEeecCccccceeEEEee
Q psy15662 74 VIFTLLGGLTNMLYHVTLL 92 (256)
Q Consensus 74 ~i~~l~GGlTN~~ykv~~~ 92 (256)
+|.+++||+||.+|+|+..
T Consensus 2 ~i~~l~gGltN~~y~v~~~ 20 (302)
T cd05156 2 EVSKISGGLTNAVYKVSLP 20 (302)
T ss_pred eEEEecCcccceeEEEEcC
Confidence 6889999999999999975
No 83
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=79.06 E-value=8.8 Score=32.71 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=60.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|--..+|++... .....|+++++-..... .....-..|..+++.+..-++ .++++.+.+ ..|.||+
T Consensus 8 lg~G~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 8 IGGGTFGKVYTAVNL-----DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-VKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred eecCCCcEEEEEEEC-----CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-hheeeeEecCCEEEEEEecC
Confidence 444555678888753 34678888887554310 122333467777777754444 457777653 4788888
Q ss_pred cCCCCCccccCCC----CC-CCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SE-LTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~e-l~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. .. +.. ..+..+|+..|+.+|+..+
T Consensus 82 ~------~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 82 S------GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred C------CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 554431 00 111 2366789999999998654
No 84
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=78.85 E-value=9.8 Score=34.86 Aligned_cols=63 Identities=17% Similarity=0.063 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhcCC-CCceeEeeC---------CeEEEEeecCCCCCccc-cCCC-------CCC---CChHHHHHHHH
Q psy15662 121 ITDSVIFTLLSERKL-GPTLHGVFP---------GGRIEEYIPDKETRKAR-SLKY-------SEL---TDPAISRKIAE 179 (256)
Q Consensus 121 ~~E~~i~~~Ls~~gl-gPkl~g~F~---------nGrIEefi~~~~~~~gr-~Lt~-------~el---~dp~i~~~IA~ 179 (256)
.+|...+..|.+.|+ .|++++++. ...|.|||+ +. +|.. ... ....+.+.||+
T Consensus 76 ~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~------~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~ 149 (268)
T PRK15123 76 DREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLA------PTISLEDYCADWATNPPDPRLKRMLIKRVAT 149 (268)
T ss_pred HHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCC------CCccHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence 489999999999999 566755553 238999999 43 4411 111 11257789999
Q ss_pred HHHhhcCCCC
Q psy15662 180 KMADIHLMQI 189 (256)
Q Consensus 180 ~La~lH~~~i 189 (256)
.+++||...+
T Consensus 150 ~i~~LH~~Gi 159 (268)
T PRK15123 150 MVRDMHAAGI 159 (268)
T ss_pred HHHHHHHCcC
Confidence 9999998653
No 85
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=78.76 E-value=5.9 Score=35.85 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=60.8
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
.|-...+|++... ..+..|.++++-.... +........|..++..+..+..-+++++.|.. ..|.||++
T Consensus 5 ~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 79 (316)
T cd05620 5 KGSFGKVLLAELK-----GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN 79 (316)
T ss_pred eCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence 3445577888763 4567889998754320 01122234466666655566677788888864 47888988
Q ss_pred CCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|. ...+.. ..+..+|+..|+-+|...+
T Consensus 80 ------~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 117 (316)
T cd05620 80 ------GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI 117 (316)
T ss_pred ------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 65552 111222 2356789999999998653
No 86
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=78.58 E-value=11 Score=32.42 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=61.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----------Gr 147 (256)
+..|-...+|++... .....|.++++.... ........|..++..++.+.--.++++.|.. ..
T Consensus 14 lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 14 VGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred eeecCCeEEEEEEEc-----CCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 334445567887653 346788888886543 2333455787888877666555677777642 37
Q ss_pred EEEeecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.||.+ +.+|.. ..+.. ..+..+||..|+.+|...+
T Consensus 87 v~e~~~------~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 132 (272)
T cd06637 87 VMEFCG------AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV 132 (272)
T ss_pred EEEcCC------CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 888888 433321 11222 2366789999999998653
No 87
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=78.35 E-value=5.7 Score=34.57 Aligned_cols=99 Identities=15% Similarity=0.112 Sum_probs=60.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|....+|++... .....++++++-.... ....+...|..+++.|. +..-+++++.|.. ..|.||++
T Consensus 13 l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 13 LGDGAFGKVYKAQHK-----ETGLFAAAKIIQIESE-EELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred hcCCCCceEEEEEEc-----CCCcEEEEEEEeeCCH-HHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEeeccC
Confidence 445556778988863 3467788998865431 22223346777777776 4445567777652 47788888
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 86 ------~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i 124 (280)
T cd06611 86 ------GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV 124 (280)
T ss_pred ------CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 543321 11222 2366788888999997654
No 88
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=78.10 E-value=11 Score=33.09 Aligned_cols=101 Identities=17% Similarity=0.142 Sum_probs=61.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEefi 152 (256)
.+..|-...+|++... ..+..|.++++.....+.......+|..+++.+...++ .++++.|..+ .|.||+
T Consensus 12 ~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07870 12 KLGEGSYATVYKGISR-----INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTFVFEYM 85 (291)
T ss_pred EEEecCCEEEEEEEEc-----CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-eEEEEEEecCCeEEEEEecc
Confidence 4555666788888753 34678999988654421111234568888877765554 4678877643 577888
Q ss_pred cCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +..+. ...+.. ..+..+|+..|+.+|...+
T Consensus 86 ~------~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 124 (291)
T cd07870 86 H------TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI 124 (291)
T ss_pred c------CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 7 43321 111111 2366788889999998654
No 89
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=77.97 E-value=14 Score=32.20 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=61.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++... ..+..+++|++.... . +..|.....++.++.--.++++.|.. -.|.||++
T Consensus 24 lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~---~---~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~ 92 (267)
T PHA03390 24 LIDGKFGKVSVLKHK-----PTQKLFVQKIIKAKN---F---NAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIK 92 (267)
T ss_pred ecCCCceEEEEEEEc-----CCCcEEEEEEEehhh---c---chhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCC
Confidence 466777788888763 456789999986543 1 12244444555566666678877742 47888988
Q ss_pred CCCCCccccCC----C-CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK----Y-SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt----~-~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|. . ..+..+ .+..+|++.|+.+|...+
T Consensus 93 ------~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 130 (267)
T PHA03390 93 ------DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNI 130 (267)
T ss_pred ------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 55552 1 123333 367789999999998653
No 90
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=77.90 E-value=10 Score=33.72 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=60.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..|+++.+..... .....-..|..+++.+...++ +++++.|.. ..|.+|+
T Consensus 26 ~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 26 KIGQGASGTVFTAIDV-----ATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNI-VNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred EEecCCCeEEEEEEEc-----CCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCce-eeeeeeEecCceEEEEEEec
Confidence 4555666788887642 3567888887765431 122222357777777754444 467887754 3788888
Q ss_pred cCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. .-+.. ..+..+|+..|+.+|+..+
T Consensus 99 ~------~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i 136 (296)
T cd06655 99 A------GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQV 136 (296)
T ss_pred C------CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 655531 11222 2355678888999997654
No 91
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=77.81 E-value=11 Score=32.60 Aligned_cols=101 Identities=17% Similarity=0.085 Sum_probs=61.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
..+..|-...+|++... ..+..|++|+.-....+.....-..|..+++.+... --+++++.|.. ..|.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 6 EKLGEGTYATVYKGRNR-----TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHE-NIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred eeeccCCceEEEEEEEC-----CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCC-CEeeeeeeEeeCCcEEEEEec
Confidence 44556667788998863 346788999875443111111223588888888543 44667887753 478888
Q ss_pred ecCCCCCccccCC---C----CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLK---Y----SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt---~----~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
++ +..+. . ..+.. -.+..+|+..|+.+|...
T Consensus 80 ~~------~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (284)
T cd07836 80 MD------KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR 120 (284)
T ss_pred CC------ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 87 42110 0 11222 246788999999999865
No 92
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=77.55 E-value=11 Score=32.54 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=62.6
Q ss_pred ceEEe-ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eE
Q psy15662 73 SVIFT-LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GR 147 (256)
Q Consensus 73 ~~i~~-l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----Gr 147 (256)
+++.. +..|....+|++... .....|+++++-... ....+...|..+++.+...++ .++++.|.. ..
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~l 79 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNL-VQLLGVCTREPPFYI 79 (263)
T ss_pred eEEeeecCCcccceEEEEEEe-----cCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCCh-hheEEEEcCCCCcEE
Confidence 33443 344666778888764 346789999986543 223334567788877754444 456776642 47
Q ss_pred EEEeecCCCCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 148 IEEYIPDKETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|.||++ +.+|.. ..+... .+..+++..|+.+|...
T Consensus 80 v~e~~~------~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 124 (263)
T cd05052 80 ITEFMT------YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 124 (263)
T ss_pred EEEeCC------CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 888988 555431 112222 24578888899999765
No 93
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=77.34 E-value=9 Score=34.23 Aligned_cols=112 Identities=19% Similarity=0.105 Sum_probs=65.5
Q ss_pred ccceEEe-ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----
Q psy15662 71 TDSVIFT-LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---- 145 (256)
Q Consensus 71 ~~~~i~~-l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---- 145 (256)
+++.+.. +..|-...+|+++............|.++++..............|..+++.+..+.--.++++.|..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 3444443 33355667788764221112344578888876543111222345688888888655555677777753
Q ss_pred eEEEEeecCCCCCccccCCC-----C-C-CCC---hHHHHHHHHHHHhhcCCC
Q psy15662 146 GRIEEYIPDKETRKARSLKY-----S-E-LTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~-----~-e-l~d---p~i~~~IA~~La~lH~~~ 188 (256)
..+.||++ +.+|.. . . +.. -.+..+|+..|+.+|...
T Consensus 115 ~lv~e~~~------~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 115 LVITEYCC------YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred EEEEEcCC------CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 48888988 555431 0 1 222 236678888999999764
No 94
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=77.31 E-value=12 Score=32.64 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=62.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----------e
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----------G 146 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----------G 146 (256)
.+..|-...+|++... ..+..+.++++.... .....-..|..+++.+..+.--.++++.|-. .
T Consensus 23 ~lg~g~~~~v~~~~~~-----~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 23 VVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred eeccCCCeEEEEEEEc-----CCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 4455667788888863 346788999875443 1222334566777777665555677777621 4
Q ss_pred EEEEeecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 147 RIEEYIPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 147 rIEefi~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+.||++ +.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 96 iv~e~~~------~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 142 (282)
T cd06636 96 LVMEFCG------AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV 142 (282)
T ss_pred EEEEeCC------CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8888888 533321 11222 2356689999999998653
No 95
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=77.18 E-value=14 Score=32.95 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++.... ......+.++.+-.............|..++..++.+.--+++++.|.. ..|.||++
T Consensus 15 lg~G~~g~V~~a~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (303)
T cd05088 15 IGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 91 (303)
T ss_pred ecCCCCceEEEEEEcc---CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence 4445566889988642 1122234444433222111222334688888888766667789988863 47888988
Q ss_pred CCCCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+-+|+..+
T Consensus 92 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 145 (303)
T cd05088 92 ------HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 145 (303)
T ss_pred ------CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 443321 01111 2366788999999998654
No 96
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=76.71 E-value=5.5 Score=36.10 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=61.4
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
.|-...+|++... ..+..|.++++..... +........|..++..+..+..-+++++.|.. ..|.||++
T Consensus 5 ~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~ 79 (320)
T cd05590 5 KGSFGKVMLARLK-----ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN 79 (320)
T ss_pred eCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence 3445677888753 3467888998754310 01222334566777666666667788888864 37889998
Q ss_pred CCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|..|. ...+.. ..+..+|+..|+-+|...+
T Consensus 80 ------~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~i 117 (320)
T cd05590 80 ------GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGI 117 (320)
T ss_pred ------CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 54442 111222 2366788999999998654
No 97
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=76.64 E-value=17 Score=30.99 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=59.6
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-...+|++... .++..|.++++.....++....-..|..+++.++..++ .++++.|.. ..|.||++
T Consensus 6 g~~g~vy~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~--- 76 (252)
T cd05084 6 GNFGEVFSGRLR-----ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-VRLIGVCTQKQPIYIVMELVQ--- 76 (252)
T ss_pred ccCccEEEEEEe-----cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEcCCCCeEEEEeecc---
Confidence 445578888763 34677889987654321122233467778887765555 457777653 47889998
Q ss_pred CCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+-+|...+
T Consensus 77 ---~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 115 (252)
T cd05084 77 ---GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC 115 (252)
T ss_pred ---CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 544331 11222 2366788888999997653
No 98
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=76.52 E-value=8 Score=35.18 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=62.1
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|-...+|++... .....|.+++.-.... +........|..++..+..+..-+++++.|.. ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~- 79 (329)
T cd05588 6 GSYAKVLLVELK-----KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS- 79 (329)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC-
Confidence 444567888763 3467888888754320 01122234677788877777667788988864 48899998
Q ss_pred CCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|..|. ...+... .+..+|+..|+.+|...+
T Consensus 80 -----~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 117 (329)
T cd05588 80 -----GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGI 117 (329)
T ss_pred -----CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55442 1112222 356788999999998653
No 99
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=76.14 E-value=9.3 Score=32.36 Aligned_cols=97 Identities=14% Similarity=0.176 Sum_probs=58.1
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc----cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE----RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e----~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
|-...+|++... ..+..|++|.+-..... +.......|..+++.+...++ .++++.+.+ ..+.||+
T Consensus 11 g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~ 84 (258)
T cd06632 11 GSFGSVYEGLNL-----DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-VQYLGTEREEDNLYIFLELV 84 (258)
T ss_pred cCCceEEEEEEc-----CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-hheeeeEecCCeEEEEEEec
Confidence 444577888763 34678989987543200 122233456666666644333 467888764 4888999
Q ss_pred cCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+... .+..+||..|+.+|...+
T Consensus 85 ~------~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 123 (258)
T cd06632 85 P------GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123 (258)
T ss_pred C------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 665531 112222 356679999999998654
No 100
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=76.03 E-value=9.5 Score=33.37 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=62.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeC---C------e
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFP---G------G 146 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---n------G 146 (256)
.+..|-...+|++... .....|+++++...... ........|..+++.+..+..-+++++.+. . .
T Consensus 8 ~lg~g~~g~vy~~~~~-----~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 8 KIGEGTYGKVYKARDK-----NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred EecccCCeEEEEEEEC-----CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 3444666778998863 34678999987543311 112234568888888876555567787764 1 4
Q ss_pred EEEEeecCCCCCccccCC------------CCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 147 RIEEYIPDKETRKARSLK------------YSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 147 rIEefi~~~~~~~gr~Lt------------~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
.|.+|++ +.... ..+-.-..+..+||..|+-+|...+
T Consensus 83 lv~e~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 131 (295)
T cd07837 83 LVFEYLD------SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV 131 (295)
T ss_pred EEeeccC------cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 7888888 42110 0111113467788999999998654
No 101
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=75.37 E-value=11 Score=33.08 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=60.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi 152 (256)
.+.-|-...+|++... .....|.+++............-..|..+++.+... --.++++.|. ...|.||+
T Consensus 8 ~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 8 ILGHGNGGTVYKAYHL-----LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSP-YIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred eeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCC-CeeeEEEEEEECCEEEEEEecC
Confidence 3455666788888753 346778888875432101111223566666665433 3345676654 25789999
Q ss_pred cCCCCCccccCCCC-CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKYS-ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~-el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|... .+.. ..+..+|+..|+.+|...+
T Consensus 82 ~------~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 116 (279)
T cd06619 82 D------GGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKI 116 (279)
T ss_pred C------CCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 9 6666421 2222 2467788899999998654
No 102
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=74.40 E-value=15 Score=31.44 Aligned_cols=98 Identities=22% Similarity=0.197 Sum_probs=62.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeec
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIP 153 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~ 153 (256)
.+..|-...+|++... ....|.++.+.... ....+...|..+++.+...++ .++++.+.. -.+.+|++
T Consensus 13 ~ig~G~~g~v~~~~~~------~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05067 13 KLGAGQFGEVWMGYYN------GHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRL-VRLYAVVTQEPIYIITEYME 83 (260)
T ss_pred eeccCccceEEeeecC------CCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCe-eeEEEEEccCCcEEEEEcCC
Confidence 4455666688988753 34678899876544 223345678888888864444 457777754 46777777
Q ss_pred CCCCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+... .+..+|+..|+.+|...+
T Consensus 84 ------~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i 123 (260)
T cd05067 84 ------NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123 (260)
T ss_pred ------CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 444421 112222 356789999999998654
No 103
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=74.37 E-value=14 Score=31.80 Aligned_cols=100 Identities=15% Similarity=0.168 Sum_probs=61.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCCe------EEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPGG------RIE 149 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG------rIE 149 (256)
.+..|-...+|++... ..+..+.++++-.... +....+...|..+++.+...++- ++++.+... .|.
T Consensus 6 ~l~~g~~~~vy~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 6 QIGEGTYGQVYKARNK-----KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIV-RLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred EeccCCCeEEEEEEEC-----CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCee-eheeeEecCCCCcEEEEe
Confidence 3455667789999864 3467888888875521 01222344677888877644443 466665433 788
Q ss_pred EeecCCCCCccccCC----C--CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLK----Y--SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt----~--~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+|++ +. |. . ..+.. -.+..+||+.|+.+|...+
T Consensus 80 e~~~------~~-l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~ 121 (287)
T cd07840 80 EYMD------HD-LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI 121 (287)
T ss_pred cccc------cc-HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8887 32 11 0 11222 2477889999999998653
No 104
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=74.35 E-value=14 Score=31.57 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=58.5
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCc----cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE----RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e----~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.|-...+|++... .....|.++.+-..... ........|..+++.+...++ .++++.|.. ..|.||
T Consensus 12 ~g~~~~vy~~~~~-----~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~ 85 (263)
T cd06625 12 QGAFGRVYLCYDV-----DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-VQYYGCLRDDETLSIFMEY 85 (263)
T ss_pred CCCceEEEEEEEc-----CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEccCCeEEEEEEE
Confidence 3444467877653 34678888876533200 011233457777777765555 467888764 477888
Q ss_pred ecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ |.+|.. ..+.. ..++.+|+..|+.+|...+
T Consensus 86 ~~------~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 125 (263)
T cd06625 86 MP------GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI 125 (263)
T ss_pred CC------CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 88 655431 11221 2356788899999997654
No 105
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=74.32 E-value=15 Score=31.72 Aligned_cols=97 Identities=21% Similarity=0.198 Sum_probs=59.1
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecC
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPD 154 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~ 154 (256)
+..|-...+|++... ....|.++++-... .....-..|..+++.+..-++ .++++.+.. ..|.+|++
T Consensus 14 lg~g~~~~v~~~~~~------~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i-~~~~~~~~~~~~~lv~e~~~- 83 (262)
T cd05071 14 LGQGCFGEVWMGTWN------GTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKL-VQLYAVVSEEPIYIVTEYMS- 83 (262)
T ss_pred cCCCCCCcEEEEEec------CCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCc-ceEEEEECCCCcEEEEEcCC-
Confidence 444556678988753 12458888886543 111223467778887765454 456776653 47888888
Q ss_pred CCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..++++.|+.+|...+
T Consensus 84 -----~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 84 -----KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123 (262)
T ss_pred -----CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 544421 11211 2466789999999998653
No 106
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=74.23 E-value=12 Score=34.81 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=42.3
Q ss_pred CCceEEEEecCCCCCc---------------cccccHH--------HHHHHHHHHHhcCC-CCceeEeeCCeEEEEeec
Q psy15662 99 EPSEVLLRIYGQTHGE---------------RALESII--------TDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIP 153 (256)
Q Consensus 99 ~~~~vLlRIyG~~t~e---------------~~~idR~--------~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~ 153 (256)
....+.++||-..+.+ ..-++|. .|..++..|.++|+ .|+-|++++|-.|-|||.
T Consensus 71 ~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~nVLvMEfIg 149 (268)
T COG1718 71 DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRNNVLVMEFIG 149 (268)
T ss_pred CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecCCeEEEEecc
Confidence 4577888888776621 0111332 58899999999998 799999999999999999
No 107
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=73.99 E-value=15 Score=31.58 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=59.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ....|+++.+-... ....+-..|..+++.+...++ .++++.|.. ..+.||+
T Consensus 13 ~lg~g~~~~v~~~~~~------~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 13 KLGAGQFGEVWEGLWN------NTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKL-IQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred EecccCCccEEEEEec------CCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCc-cceeEEEecCCCeeeeeecc
Confidence 4444556688887753 23578899876543 122233457777777764444 457777754 3788888
Q ss_pred cCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 153 PDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+ +.+|.. ..+.. ..+..+|+..++.+|...
T Consensus 84 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 84 K------YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred c------CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 7 555521 11211 346677888899999854
No 108
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=73.94 E-value=9.5 Score=33.55 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=62.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-.-.+|++... ..+..|+++++-.... ....+-..|..+++.+.. ..-.++++.|.. ..|.+|+
T Consensus 19 ~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 19 ELGDGAFGKVYKAKNK-----ETGALAAAKVIETKSE-EELEDYMVEIEILATCNH-PYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred eecCCCCeEEEEEEEC-----CCCceEEEEEeccCCH-HHHHHHHHHHHHHHhCCC-CcEeeeEEEEEeCCeEEEEEecC
Confidence 4555666788998763 3467899999876542 223333456666766653 334567776642 4788888
Q ss_pred cCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 92 ~------~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 131 (292)
T cd06644 92 P------GGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI 131 (292)
T ss_pred C------CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 8 655421 11222 2367788899999998654
No 109
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=73.55 E-value=8.8 Score=34.79 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=63.0
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+.-|-...+|++... ..+..|.+++.-.... +........|..++..+....+-+++++.|.. ..|.|
T Consensus 7 ~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 7 VLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred EEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 3455666788888763 4567899998764310 01122233566677666666777788888753 37789
Q ss_pred eecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
|++ |..|.. ..+.. ..+..+||..|+-+|...
T Consensus 82 y~~------~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 121 (323)
T cd05615 82 YVN------GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG 121 (323)
T ss_pred CCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 554421 11222 236678889999999854
No 110
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=73.18 E-value=14 Score=31.85 Aligned_cols=94 Identities=22% Similarity=0.224 Sum_probs=58.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~ 157 (256)
|--..+|++... ....+++++..... ....+-..|..+++.+...++-| +++.+.. ..+.+|++
T Consensus 17 g~~~~v~~~~~~------~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~v~e~~~---- 83 (260)
T cd05069 17 GCFGEVWMGTWN------GTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVP-LYAVVSEEPIYIVTEFMG---- 83 (260)
T ss_pred cCCCeEEEEEEc------CCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCcEEEEEcCC----
Confidence 334467888753 12458888876543 12122346888888887666664 6677653 47888888
Q ss_pred CccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 84 --~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 84 --KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY 123 (260)
T ss_pred --CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 555421 11222 2467788999999998653
No 111
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=72.78 E-value=14 Score=32.10 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=63.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEee--CC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVF--PG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F--~n----GrIEe 150 (256)
.+..|-...+|++..... +...+..|.++.+.... +.....-..|..+++.+...++- ++++.+ .+ ..|.|
T Consensus 11 ~lg~g~~g~v~~~~~~~~-~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~~~lv~e 87 (284)
T cd05081 11 QLGKGNFGSVELCRYDPL-QDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIV-KYKGVCYSAGRRNLRLVME 87 (284)
T ss_pred eccCCCCceEEEEEecCC-cCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCee-EEEEEEccCCCCceEEEEE
Confidence 344556678888875321 13456789999987654 12222335688888877655554 466553 22 37899
Q ss_pred eecCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 88 ~~~------~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i 129 (284)
T cd05081 88 YLP------YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129 (284)
T ss_pred ecC------CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 998 655531 11211 2356788999999998654
No 112
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=72.41 E-value=8 Score=35.03 Aligned_cols=102 Identities=14% Similarity=0.113 Sum_probs=61.6
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|-...+|++... ..+..|.++++-..... ........|..++..+... .-.++++.|.. ..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 7 TQVGQGGYGQVFLAKKK-----DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSE-WLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred EEEeecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCC-CCccEEEEEEcCCEEEEEE
Confidence 34445666778988863 34678999988643200 1122334577777766533 34567777754 3788
Q ss_pred EeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
||++ |.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 81 e~~~------g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 122 (333)
T cd05600 81 EYVP------GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGY 122 (333)
T ss_pred eCCC------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 9998 654431 11222 2356788999999997653
No 113
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=72.13 E-value=15 Score=32.57 Aligned_cols=107 Identities=16% Similarity=0.178 Sum_probs=64.8
Q ss_pred eecCccccceeEEEeecCC--CCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPI--QSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~--~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|-...+|++...... .......|+++++..........+-..|..+++.++.+.--.++++.|.. ..|.|
T Consensus 22 ~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 101 (304)
T cd05101 22 PLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVE 101 (304)
T ss_pred eeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEe
Confidence 3445556788888643211 01234578899886543112233445788888888666666778888764 37888
Q ss_pred eecCCCCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+.- -.+..+|++.|+.+|...+
T Consensus 102 ~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi 158 (304)
T cd05101 102 YAS------KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC 158 (304)
T ss_pred cCC------CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 888 433321 01111 1356689999999998653
No 114
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=71.98 E-value=16 Score=32.43 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=60.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..|.++.+..... ........|..+++.+...++ .++++.|.. ..|.+|+
T Consensus 26 ~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 26 KIGQGASGTVYTAIDI-----ATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNI-VNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred eeccCCCeEEEEEEEC-----CCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCE-eeEEEEEecCCEEEEeeccc
Confidence 3445666788988753 4567899998865431 111112346666666654454 456776653 4788899
Q ss_pred cCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. ..+..+++..|+.+|...+
T Consensus 99 ~------~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i 136 (297)
T cd06656 99 A------GGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQV 136 (297)
T ss_pred C------CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 655532 11111 2456678889999997653
No 115
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=71.63 E-value=20 Score=30.74 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=58.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ....++++++-... ....+...|..+++.+..-+ -.++++.|.. ..|.||++
T Consensus 12 lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 12 LGSGQFGVVHLGKWR------GKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPN-LVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred hccCCCceEEEeEec------CCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCC-EEEEEEEEcCCCceEEEEecCC
Confidence 345566678888652 24578888875433 11122346777777775433 3457777653 48888888
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 83 ------~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 121 (256)
T cd05059 83 ------NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF 121 (256)
T ss_pred ------CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 554421 11222 2366788899999998653
No 116
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=71.53 E-value=6.2 Score=33.80 Aligned_cols=97 Identities=14% Similarity=0.142 Sum_probs=57.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|....+|++... .....|+++.+.....+........|..+++.+. +.--.++++.|.. ..+.+|++
T Consensus 9 ig~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (265)
T cd06605 9 LGAGNSGVVSKVLHR-----PTGKIMAVKTIRLEINEAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICMEYMD 82 (265)
T ss_pred hcCCCCeEEEEEEEc-----CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEEEecC
Confidence 334555568888763 3567888988766542111122235666666655 3333456666542 47788888
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~ 186 (256)
+.+|.. ..+.. ..+..+|+..|+.+|+
T Consensus 83 ------~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~ 118 (265)
T cd06605 83 ------GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118 (265)
T ss_pred ------CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 665531 11111 2467789999999998
No 117
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=71.51 E-value=14 Score=31.30 Aligned_cols=94 Identities=18% Similarity=0.186 Sum_probs=59.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|.--.+|++... .....++++.+-... ...+...|..+++.+...++ .++++.|.. ..+.+|++
T Consensus 14 g~~~~v~~~~~~-----~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~l~~e~~~--- 81 (256)
T cd06612 14 GSYGSVYKAIHK-----ETGQVVAIKVVPVEE---DLQEIIKEISILKQCDSPYI-VKYYGSYFKNTDLWIVMEYCG--- 81 (256)
T ss_pred CCCeEEEEEEEc-----CCCcEEEEEEeecHH---HHHHHHHHHHHHHhCCCCcE-eeeeeeeecCCcEEEEEecCC---
Confidence 333466777653 345788999886544 23455678888888744444 467877764 37889988
Q ss_pred CCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 82 ---~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i 120 (256)
T cd06612 82 ---AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK 120 (256)
T ss_pred ---CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 655531 11111 2467788899999998654
No 118
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=71.47 E-value=6.7 Score=33.23 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=56.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|....+|++... ..+..++++++...... ........|..+++.+...++ +++++.+.. ..+.+|++
T Consensus 4 g~~~~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~~- 76 (265)
T cd05579 4 GAYGRVFLAKKK-----STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-VKLYYSFQGKKNLYLVMEYLP- 76 (265)
T ss_pred CCceEEEEEEEC-----CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch-hHHHHheecCcEEEEEEecCC-
Confidence 444578888863 34678999998654310 112223345566665553333 445666553 36888888
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 77 -----~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i 114 (265)
T cd05579 77 -----GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGI 114 (265)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence 554421 12222 2467889999999998654
No 119
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=71.34 E-value=40 Score=29.36 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=60.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEefi 152 (256)
.+..|-...+|++... ..+..|+++.+...........-..|..+++.+...++- ++++.|..+ .|.||+
T Consensus 12 ~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~ 85 (291)
T cd07844 12 KLGEGSYATVYKGRSK-----LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIV-TLHDIIHTKKTLTLVFEYL 85 (291)
T ss_pred EEeecCCeEEEEEEEc-----CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCccee-eEEEEEecCCeEEEEEecC
Confidence 4444555678988753 346789999876543111111224688888888655544 677777643 888888
Q ss_pred cCCCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ + .|. ...+.. -.+..+|++.|+-+|...+
T Consensus 86 ~------~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i 124 (291)
T cd07844 86 D------T-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV 124 (291)
T ss_pred C------C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8 4 231 111221 2355688999999998653
No 120
>PHA02988 hypothetical protein; Provisional
Probab=71.33 E-value=15 Score=32.62 Aligned_cols=97 Identities=12% Similarity=0.189 Sum_probs=61.0
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cc-cccHHHHHHHHHHHHhcCCCCceeEeeCC--------e
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RA-LESIITDSVIFTLLSERKLGPTLHGVFPG--------G 146 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~-~idR~~E~~i~~~Ls~~glgPkl~g~F~n--------G 146 (256)
.+..|-...+|+.... +..|+++.+...... .. +..-.+|..++..+...++- +++|+|.. .
T Consensus 27 ~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 27 LIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNIL-KIYGFIIDIVDDLPRLS 98 (283)
T ss_pred EEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEE-EEeeeEEecccCCCceE
Confidence 3445556678887752 678999998764311 11 22334788888888665553 57877633 3
Q ss_pred EEEEeecCCCCCccccCCC-----CCCC---ChHHHHHHHHHHHhhcCC
Q psy15662 147 RIEEYIPDKETRKARSLKY-----SELT---DPAISRKIAEKMADIHLM 187 (256)
Q Consensus 147 rIEefi~~~~~~~gr~Lt~-----~el~---dp~i~~~IA~~La~lH~~ 187 (256)
.|.||++ +.+|.. ..+. .-.+..+||..|+.+|..
T Consensus 99 lv~Ey~~------~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 141 (283)
T PHA02988 99 LILEYCT------RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY 141 (283)
T ss_pred EEEEeCC------CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 7889999 544421 1111 234667899999999973
No 121
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=71.30 E-value=16 Score=31.79 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=59.2
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|-...+|++... .....|+++++.....+........|..+++.+.. ..-+++++.|.+ ..|.||++
T Consensus 14 ~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~-- 85 (277)
T cd06642 14 KGSFGEVYKGIDN-----RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYITRYYGSYLKGTKLWIIMEYLG-- 85 (277)
T ss_pred CCCCeeEEEEEEc-----CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC-CccHhhhcccccCCceEEEEEccC--
Confidence 3445577887653 34567899988744321223334567777777653 334557777653 48889998
Q ss_pred CCCccccCC----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLK----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+... .+..+|+..|+-+|...+
T Consensus 86 ----~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 122 (277)
T cd06642 86 ----GGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 122 (277)
T ss_pred ----CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 55442 1223333 356778888888997543
No 122
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=71.29 E-value=18 Score=30.44 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=60.5
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|....+|++... ..+..|.+|.+-..... .....-..|..++..+...++- ++++.+.+ ..+.+|
T Consensus 7 ~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 7 LIGRGAFGVVYKGLNL-----ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIV-KYIGSIETSDSLYIILEY 80 (254)
T ss_pred EEcccCCeEEEEEEEc-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCcc-EEEEEEEeCCEEEEEEec
Confidence 4455666788888753 34578999998765410 1122234566666666544443 46666543 478888
Q ss_pred ecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 81 ~~------~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 81 AE------NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred CC------CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 88 655531 11211 2467788899999998654
No 123
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=71.15 E-value=12 Score=33.95 Aligned_cols=98 Identities=13% Similarity=0.160 Sum_probs=59.5
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEefi~~ 154 (256)
|---.+|++... ..+..|.++++-.... +........|..++..+..+..-+++++.|... .|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~- 79 (316)
T cd05619 6 GSFGKVFLAELK-----GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN- 79 (316)
T ss_pred CCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC-
Confidence 334467888753 3467788888754320 012223345666666555666667788888642 7889998
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 80 -----~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05619 80 -----GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI 117 (316)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 555421 11111 2466789999999998654
No 124
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=71.14 E-value=58 Score=27.91 Aligned_cols=94 Identities=23% Similarity=0.238 Sum_probs=54.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~ 157 (256)
|--..+|++... ....+++|...... .....-..|..+++.+...++-+ +++.+.. ..+.+|++
T Consensus 17 g~~~~vy~~~~~------~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~v~e~~~---- 83 (260)
T cd05073 17 GQFGEVWMATYN------KHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVK-LHAVVTKEPIYIITEFMA---- 83 (260)
T ss_pred ccceEEEEEEec------CCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcce-EEEEEcCCCeEEEEEeCC----
Confidence 333455555432 23458888776543 12223345878888876655544 5666543 47888888
Q ss_pred CccccCC-------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLK-------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt-------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. -.+..+|+..|+-+|...+
T Consensus 84 --~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (260)
T cd05073 84 --KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 123 (260)
T ss_pred --CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 54442 111121 2356789999999997653
No 125
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=71.11 E-value=17 Score=31.82 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=61.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--ccc-ccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RAL-ESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~-idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
+..|--..+|.+..... ...+..|.++++-..... ... ..-..|..++..+..+..=+++++.|.. ..|.|
T Consensus 8 lg~G~~g~v~~~~~~~~--~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (290)
T cd05613 8 LGTGAYGKVFLVRKVSG--HDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILD 85 (290)
T ss_pred eccCCcceEEEEEeccC--CCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEe
Confidence 44455556888775321 134677889988653210 011 1123577777777666666677777753 37889
Q ss_pred eecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+... .+..+||+.|+.+|...+
T Consensus 86 ~~~------~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 126 (290)
T cd05613 86 YIN------GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGI 126 (290)
T ss_pred cCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 999 554431 112222 244578999999998654
No 126
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=71.08 E-value=12 Score=32.29 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=61.5
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|-.-.+|++......+......|.++++-.....+...+...|..+++.+...++ .++++.|.. ..+.+|++
T Consensus 15 ~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~-- 91 (280)
T cd05049 15 EGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-VKFYGVCTEGDPPIMVFEYME-- 91 (280)
T ss_pred ccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-hheeeEEecCCCeEEEEecCC--
Confidence 34445778776542111234577999998665421122344568788887765444 457777653 57888888
Q ss_pred CCCccccCCC-------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY-------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~-------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..++.+|...+
T Consensus 92 ----~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 143 (280)
T cd05049 92 ----HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF 143 (280)
T ss_pred ----CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence 554421 11222 2357789999999998553
No 127
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=71.03 E-value=20 Score=31.29 Aligned_cols=103 Identities=15% Similarity=0.164 Sum_probs=61.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc---cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE---RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e---~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
+..|--..+|++..... ......|.++++...... ........|..++..+..+..-+++++.|.. ..|.|
T Consensus 8 ig~G~~~~vy~~~~~~~--~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e 85 (288)
T cd05583 8 LGTGAYGKVFLVRKVGG--HDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILD 85 (288)
T ss_pred eccCCCceEEEEEEecc--ccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEe
Confidence 44445556787764321 134567888987643200 1112234677888888777777778888764 37889
Q ss_pred eecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|++ +.+|.. ..+... .+..++|+.|+.+|...
T Consensus 86 ~~~------~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 125 (288)
T cd05583 86 YVN------GGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG 125 (288)
T ss_pred cCC------CCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 998 544421 112222 24558899999999754
No 128
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=70.95 E-value=11 Score=34.34 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=61.3
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|--..+|++... ..+..|.+++.-.... +........|..++..+..+..-+++++.|.. ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~- 79 (327)
T cd05617 6 GSYAKVLLVRLK-----KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN- 79 (327)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC-
Confidence 444567888763 3467788888754320 01122234677777777777777788888863 48889998
Q ss_pred CCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|..|. ...+.. ..+..+|+..|+-+|+..+
T Consensus 80 -----~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 117 (327)
T cd05617 80 -----GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI 117 (327)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 65542 112222 2366788999999998653
No 129
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=70.91 E-value=12 Score=31.79 Aligned_cols=101 Identities=19% Similarity=0.310 Sum_probs=57.0
Q ss_pred CccccceeEEEeecCCC-----CCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEee---CCeEEEEe
Q psy15662 80 GGLTNMLYHVTLLQPIQ-----SSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVF---PGGRIEEY 151 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~-----~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F---~nGrIEef 151 (256)
.|-...+|+........ ......+.++++.... .....-.+|..+++.+...++ .+++|.+ ....|.||
T Consensus 5 ~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~lv~e~ 81 (259)
T cd05037 5 QGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH--RDSLAFFETASLMSQLSHKHL-VKLYGVCVRDENIMVEEY 81 (259)
T ss_pred ccccceEEEEEEeccCCccccCCccceeeeeeccccch--hhHHHHHHHHHHHHcCCCcch-hheeeEEecCCcEEEEEc
Confidence 34456678777642100 0111357778776554 222223356666666654444 3567765 45789999
Q ss_pred ecCCCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|. ...+.. -.+..+|+..|+-+|...+
T Consensus 82 ~~------~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 122 (259)
T cd05037 82 VK------FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL 122 (259)
T ss_pred CC------CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 98 55553 111222 2356789999999998653
No 130
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=70.53 E-value=16 Score=32.44 Aligned_cols=100 Identities=16% Similarity=0.209 Sum_probs=60.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..|.++.+-.... ........|..+++.+...++- ++++.|.. ..|.+|+
T Consensus 27 ~lg~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~-~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 27 KIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIV-NYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred EecCCCCeEEEEEEEC-----CCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEe-eEEEEEEeCCEEEEeeccc
Confidence 3555666788988742 3467888887764431 1222234577777766555554 46666542 4788898
Q ss_pred cCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. ..+..+||..|+.+|...+
T Consensus 100 ~------~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi 137 (296)
T cd06654 100 A------GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 137 (296)
T ss_pred C------CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 655531 11111 2466689999999998764
No 131
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=70.50 E-value=14 Score=32.41 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=61.0
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
..|-...+|++.............+.++.+.... +....+-..|..+++.+...++ .++++.|.. ..|.||++
T Consensus 14 g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~- 90 (288)
T cd05093 14 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHI-VKFYGVCVEGDPLIMVFEYMK- 90 (288)
T ss_pred CCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCccEEEEEcCC-
Confidence 3445677888875321112334557788876544 1223344568888877754444 567777753 48888888
Q ss_pred CCCCccccCCC------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 91 -----~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i 141 (288)
T cd05093 91 -----HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF 141 (288)
T ss_pred -----CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 555420 01221 2367789999999998653
No 132
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=70.43 E-value=12 Score=32.18 Aligned_cols=94 Identities=22% Similarity=0.212 Sum_probs=55.6
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~ 157 (256)
|-...+|++... ....+.++++.... ....+-..|..+++.+...++- ++++.+.. ..+.+|++
T Consensus 17 g~~~~v~~~~~~------~~~~~~~k~~~~~~--~~~~~~~~E~~~l~~l~~~~i~-~~~~~~~~~~~~lv~e~~~---- 83 (260)
T cd05070 17 GQFGEVWMGTWN------GNTKVAVKTLKPGT--MSPESFLEEAQIMKKLRHDKLV-QLYAVVSEEPIYIVTEYMS---- 83 (260)
T ss_pred ccCceEEEEEec------CCceeEEEEecCCC--CCHHHHHHHHHHHHhcCCCceE-EEEeEECCCCcEEEEEecC----
Confidence 333455665432 23457777776543 1222345688888877665554 45666653 58888888
Q ss_pred CccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 84 --~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05070 84 --KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123 (260)
T ss_pred --CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 554421 11222 3466788899999998653
No 133
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=70.41 E-value=39 Score=28.83 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=60.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ....+.++.+-... ....+-..|..+++.+..-++- ++++.|.. ..|.+|.
T Consensus 11 ~lg~G~~~~vy~~~~~------~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 11 ELGSGQFGVVHLGKWR------AQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLV-QLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred EecCCcCceEEEEEec------cCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCce-eEEEEEccCCCEEEEEEcC
Confidence 3555666788988763 23568888765433 1222345688888888655555 46777653 5888999
Q ss_pred cCCCCCccccCCC------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+..+ .+..+|+..|+.+|...+
T Consensus 82 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05114 82 E------NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121 (256)
T ss_pred C------CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 543321 122222 366678888899998654
No 134
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=70.27 E-value=8 Score=33.22 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=59.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
+.-|--..+|++... ..+..|.++++..... +........|..+++.+..+.--+++++.|.+ ..+.+|
T Consensus 9 lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd05581 9 IGEGSFSTVVLAKEK-----ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEY 83 (280)
T ss_pred ecCCCceEEEEEEEc-----CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcC
Confidence 334455578888863 3567899999875320 01112234566667666634444567777754 366777
Q ss_pred ecCCCCCccccCC--------CCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK--------YSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt--------~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
.+ +.+|. ...-....+..+|+..|+.+|...+
T Consensus 84 ~~------~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~ 123 (280)
T cd05581 84 AP------NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGI 123 (280)
T ss_pred CC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 76 54442 0111123467789999999998654
No 135
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=70.14 E-value=12 Score=33.32 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=60.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ..+..|+++...... .........|..+++.+.. .--+++++.|.. ..+.||+
T Consensus 27 ~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 27 KIGEGSTGIVCIATVK-----SSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred HcCCCCCeEEEEEEEc-----CCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCC-cchhheeeEEEeCCEEEEEEecC
Confidence 3455666788888763 346788888765433 1122223457777776654 344567777653 4888999
Q ss_pred cCCCCCccccCCCC----CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKYS----ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~----el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|..- .+.. -.+..+|+..|+.+|...+
T Consensus 100 ~------~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 100 E------GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred C------CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8 6655311 1111 2467788888999998654
No 136
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=70.01 E-value=19 Score=30.62 Aligned_cols=100 Identities=11% Similarity=0.135 Sum_probs=59.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+.-|-...+|++... ..+..+.++++..........+...|..+++.+...++ +++++.+.. ..+.+|++
T Consensus 9 lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~~~ 82 (267)
T cd06610 9 IGVGATAVVYAAICL-----PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-VKYYTSFVVGDELWLVMPYLS 82 (267)
T ss_pred ecCCCCeEEEEEEEc-----CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-EEEEEEEeeCCEEEEEEeccC
Confidence 344556788998863 34667888988654321222334567777776654433 456665542 47788887
Q ss_pred CCCCCccccCCC--------CCCC---ChHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY--------SELT---DPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~--------~el~---dp~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+. -..+..+|+..|+.+|...+
T Consensus 83 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i 123 (267)
T cd06610 83 ------GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ 123 (267)
T ss_pred ------CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 543321 1111 13467789999999998654
No 137
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=69.89 E-value=63 Score=28.13 Aligned_cols=105 Identities=17% Similarity=0.214 Sum_probs=60.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++.............+.++++-....+....+...|..+++.+.++..-.++++.|.. ..|.||++
T Consensus 20 ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~ 99 (293)
T cd05053 20 LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAA 99 (293)
T ss_pred ecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCC
Confidence 34455567888876431111334567888776432112223344677888777555445567777653 36778887
Q ss_pred CCCCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+||..|+-+|...
T Consensus 100 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ 152 (293)
T cd05053 100 ------HGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK 152 (293)
T ss_pred ------CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 433320 11111 136778999999999754
No 138
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=69.72 E-value=53 Score=28.23 Aligned_cols=101 Identities=16% Similarity=0.093 Sum_probs=59.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHh--cCCCCceeEeeC---------
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSE--RKLGPTLHGVFP--------- 144 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~--~glgPkl~g~F~--------- 144 (256)
.+..|-...+|++... .....|.+|++.....++ .......|..+++.++. +.--.++++.|.
T Consensus 6 ~l~~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 6 EIGEGAYGTVYKARDL-----NTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred EecccCceEEEEEEEC-----CCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 3444555678998874 346789999886443111 12234467777877763 344457787764
Q ss_pred CeEEEEeecCCCCCccccCC-------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 145 GGRIEEYIPDKETRKARSLK-------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 nGrIEefi~~~~~~~gr~Lt-------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
-..+.+|++ +. |. ...+.. -.+..+||+.|+.+|...+
T Consensus 81 ~~l~~e~~~------~~-l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i 128 (287)
T cd07838 81 LTLVFEHVD------QD-LATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI 128 (287)
T ss_pred eEEEehhcc------cC-HHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 235666766 32 21 011222 2377789999999998653
No 139
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=69.52 E-value=29 Score=30.42 Aligned_cols=97 Identities=12% Similarity=0.194 Sum_probs=57.8
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|-...+|++... ..+..|.+++....... ..+.....|..+++.+...++ .++++.|.. ..|.||++
T Consensus 4 G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~- 76 (280)
T cd05608 4 GGFGEVSACQMR-----ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-VSLAYAFQTKTDLCLVMTIMN- 76 (280)
T ss_pred CCceeEEEEEEc-----cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-eeeeEEEcCCCeEEEEEeCCC-
Confidence 344577888753 34678888887543200 111222457777777754444 456666643 37889998
Q ss_pred CCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+..+ .+..+|+..|+-+|+..+
T Consensus 77 -----~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 118 (280)
T cd05608 77 -----GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI 118 (280)
T ss_pred -----CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 665531 112222 366789999999998654
No 140
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=69.50 E-value=11 Score=32.63 Aligned_cols=97 Identities=12% Similarity=0.201 Sum_probs=60.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
|-...+|++... ..+..|++|++-..... +.......|..+++.+..-++ +++++.|.. ..+.||++
T Consensus 12 g~~~~v~~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~iv~e~~~-- 83 (288)
T cd07833 12 GAYGVVLKCRNK-----ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-VNLKEAFRRKGRLYLVFEYVE-- 83 (288)
T ss_pred cCCeeEEEEEeC-----CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-eehhheEEECCEEEEEEecCC--
Confidence 444567888763 34678999998653211 122234568888888874443 457777653 47888888
Q ss_pred CCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+..+.. ..+.. -.+..+||..|+.+|...+
T Consensus 84 ----~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (288)
T cd07833 84 ----RTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI 121 (288)
T ss_pred ----CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 543321 11222 2467789999999998653
No 141
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=68.67 E-value=12 Score=32.36 Aligned_cols=99 Identities=19% Similarity=0.248 Sum_probs=61.1
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++... .....|.++.+..... .......+|..+++.+...++- ++++.|.. ..|.+|++
T Consensus 16 lg~g~~g~v~~~~~~-----~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 88 (268)
T cd06624 16 LGKGTYGIVYAARDL-----STQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIV-QYLGSDSENGFFKIFMEQVP 88 (268)
T ss_pred EecCCceEEEEeEec-----CCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCee-eeeeeeccCCEEEEEEecCC
Confidence 444555567888753 3456788887655431 2233345677888877655554 57777653 37778888
Q ss_pred CCCCCccccCCC------CCC--CC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SEL--TD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el--~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+ .. ..+..+|+..|+-+|...+
T Consensus 89 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 129 (268)
T cd06624 89 ------GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI 129 (268)
T ss_pred ------CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence 666542 112 11 1356789999999998654
No 142
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=68.57 E-value=20 Score=30.91 Aligned_cols=101 Identities=12% Similarity=0.111 Sum_probs=58.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cc--------cccHHHHHHHHHHHHhcCCCCceeEeeCC--
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RA--------LESIITDSVIFTLLSERKLGPTLHGVFPG-- 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~--------~idR~~E~~i~~~Ls~~glgPkl~g~F~n-- 145 (256)
.+..|-...+|++... ..+..|.+|.+-..... .. ...-..|..+++.+.. .--+++++.+..
T Consensus 8 ~lg~g~~~~vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~ 81 (272)
T cd06629 8 LIGKGTYGRVYLALNV-----TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH-LNIVQYLGFETTEE 81 (272)
T ss_pred eecccCceEEEEEeec-----CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC-CCcceEEEEeccCC
Confidence 3445555677887642 34678888876432100 00 0112346666666643 334678888764
Q ss_pred --eEEEEeecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 146 --GRIEEYIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 --GrIEefi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.+|.. ..+... .+..+||..|.-+|...+
T Consensus 82 ~~~lv~e~~~------~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 129 (272)
T cd06629 82 YLSIFLEYVP------GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGI 129 (272)
T ss_pred ceEEEEecCC------CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 47889998 554421 112222 356789999999998653
No 143
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=68.40 E-value=16 Score=31.76 Aligned_cols=100 Identities=11% Similarity=0.158 Sum_probs=61.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+.-|-...+|++... .....|.++++-..... ........|..+++.+...++- ++++.|.. ..|.||+
T Consensus 9 lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07848 9 VGEGAYGVVLKCRHK-----ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIV-ELKEAFRRRGKLYLVFEYV 82 (287)
T ss_pred ecccCCEEEEEEEEC-----CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCcccc-chhhhEecCCEEEEEEecC
Confidence 344666788998863 34677889988654310 1122234678888777665554 46666653 4888998
Q ss_pred cCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +..+.. ..+.. -.+..+|+..|+.+|...+
T Consensus 83 ~------~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 121 (287)
T cd07848 83 E------KNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI 121 (287)
T ss_pred C------CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8 443221 11222 2367888999999997653
No 144
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=68.18 E-value=24 Score=31.79 Aligned_cols=104 Identities=14% Similarity=0.197 Sum_probs=61.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC---ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG---ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~---e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
+.-|--..+|++.... ....+..|.++++..... +........|..+++.+..+..-.++++.|.. ..|.|
T Consensus 8 lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (332)
T cd05614 8 LGTGAYGKVFLVRKVT--GHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILD 85 (332)
T ss_pred EeecCCEEEEEEEEcc--cCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEe
Confidence 3334455678776431 123567788998754220 01112234577777777666666678888763 37889
Q ss_pred eecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ |..|. ...+... .+..+|+..|+.+|...+
T Consensus 86 ~~~------~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 126 (332)
T cd05614 86 YVS------GGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI 126 (332)
T ss_pred CCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 988 54432 1112222 356689999999998654
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=68.07 E-value=29 Score=30.54 Aligned_cols=101 Identities=9% Similarity=0.068 Sum_probs=60.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|-...+|++... .....|.+|++...... .....-..|..+++.+....+.+ +++.|.. ..+.+
T Consensus 7 ~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~-~~~~~~~~~~~~lv~e 80 (285)
T cd05632 7 VLGKGGFGEVCACQVR-----ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVN-LAYAYETKDALCLVLT 80 (285)
T ss_pred EEecCCCeEEEEEEEC-----CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCcee-EEEEEecCCEEEEEEE
Confidence 3445556678888763 35678999988653210 01111235788888887666655 5555542 47889
Q ss_pred eecCCCCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ +..|.. ..+..+ .+..+|+..|.-+|...+
T Consensus 81 ~~~------~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 81 IMN------GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred ecc------CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 998 554421 112222 355678888888998654
No 146
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=67.94 E-value=20 Score=31.54 Aligned_cols=104 Identities=16% Similarity=0.112 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++.............+.++....... .....-..|..+++.+... --.++++.|.+ ..|.+|++
T Consensus 13 lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~~ 90 (291)
T cd05094 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHE-HIVKFYGVCGDGDPLIMVFEYMK 90 (291)
T ss_pred ecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCC-CcceEEEEEccCCceEEEEecCC
Confidence 445556788888754321122344577777654431 1112233577777776543 44568888764 47888888
Q ss_pred CCCCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 91 ------~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 144 (291)
T cd05094 91 ------HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF 144 (291)
T ss_pred ------CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 554421 01111 2466788999999998653
No 147
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=67.72 E-value=33 Score=29.66 Aligned_cols=102 Identities=12% Similarity=0.029 Sum_probs=61.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
..+..|....+|++... ..+..|.++++-..... ........|..+++.+. +.--.++++.|.. ..|.+
T Consensus 6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 6 EKIGEGTYGVVYKGRNK-----KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred eEecccCceEEEEEEEC-----CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEe
Confidence 34555667788998863 34678888887533211 11223456777777776 3344567877753 36778
Q ss_pred eecCCCCCccccC------CC-CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSL------KY-SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~L------t~-~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ +.-. .. ..+..+ .+..+|++.|+.+|...+
T Consensus 80 ~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 122 (285)
T cd07861 80 FLS------MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV 122 (285)
T ss_pred cCC------CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 877 4211 00 122222 367899999999998653
No 148
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=67.63 E-value=37 Score=29.99 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=60.5
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... .....|.++.+..............|..+++.|...++- ++++.|.. ..|.||+
T Consensus 13 ~lg~g~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~-~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 13 KLGEGTYATVYKGRSK-----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred EeccCcCEEEEEEEEc-----CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcc-eEEEEEecCCeEEEEEecc
Confidence 4455666788988753 345778888775433111222345688888888655554 57777753 3677887
Q ss_pred cCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.-+. ...+.. ..+..+|++.|+.+|+..+
T Consensus 87 ~------~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (301)
T cd07873 87 D------KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV 125 (301)
T ss_pred c------cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 7 42110 011211 2356789999999998653
No 149
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=67.23 E-value=24 Score=30.88 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=60.5
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccc-cccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERA-LESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~-~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|-...+|++... ..+..|+++.+......+. ......|..+++.+.. .--+++++.|.+ ..|.||
T Consensus 9 ~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 82 (294)
T PLN00009 9 KIGEGTYGVVYKARDR-----VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-GNIVRLQDVVHSEKRLYLVFEY 82 (294)
T ss_pred EecCCCCEEEEEEEec-----CCCcEEEEEehhhccccccchHHHHHHHHHHHhccC-CCEeeEEEEEecCCeEEEEEec
Confidence 3455667788988763 3467899998754321011 1223467888887754 344568888764 478888
Q ss_pred ecCCCCCccccC----CCCCC--CC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSL----KYSEL--TD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~L----t~~el--~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.-+ ..... .. ..+..+||..|+-+|...+
T Consensus 83 ~~------~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 123 (294)
T PLN00009 83 LD------LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV 123 (294)
T ss_pred cc------ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 87 4211 11111 11 1356689999999998653
No 150
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=67.22 E-value=22 Score=30.62 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC----ccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG----ERALESIITDSVIFTLLSERKLGPTLHGVFPG------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~----e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------Gr 147 (256)
+..|-...+|++... ..+..|.++....... .........|..+++.+...++- ++++.|.. ..
T Consensus 10 lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~~l 83 (266)
T cd06651 10 LGQGAFGRVYLCYDV-----DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIV-QYYGCLRDRAEKTLTI 83 (266)
T ss_pred ecCCCCEEEEEEEEc-----CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCee-eEEEEEEcCCCCEEEE
Confidence 344555678888753 3467888887653320 01222345678888888655554 46777642 24
Q ss_pred EEEeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|++ +.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 84 ~~e~~~------~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 127 (266)
T cd06651 84 FMEYMP------GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI 127 (266)
T ss_pred EEeCCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 788888 655431 11221 1367789999999998654
No 151
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=67.07 E-value=25 Score=30.66 Aligned_cols=104 Identities=15% Similarity=0.155 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEef 151 (256)
+..|-...+|.+..... .......|.++.+...........-..|..+++.+...++-+ +++.+.. ..+.||
T Consensus 12 lg~g~~g~v~~~~~~~~-~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05079 12 LGEGHFGKVELCRYDPE-GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK-YKGICTEDGGNGIKLIMEF 89 (284)
T ss_pred cCCCCceeEEEEEEccC-CCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeee-eeeEEecCCCCceEEEEEc
Confidence 34444556777764311 123467788888754431112222345777777775544443 5665532 378899
Q ss_pred ecCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ |.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 90 ~~------g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi 130 (284)
T cd05079 90 LP------SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY 130 (284)
T ss_pred cC------CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 99 666632 11211 2467799999999998643
No 152
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=67.02 E-value=27 Score=30.91 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=60.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-.-.+|++... ..+..|.++++-............+|..+++.+...++ .++++.|.. ..|.||+
T Consensus 12 ~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~ 85 (303)
T cd07869 12 KLGEGSYATVYKGKSK-----VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-VLLHDIIHTKETLTLVFEYV 85 (303)
T ss_pred eEEecCCEEEEEEEEC-----CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-CeEEEEEecCCeEEEEEECC
Confidence 4444555678888763 35678999987643311112233568888887765555 467777753 4777887
Q ss_pred cCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 153 PDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 153 ~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+ +.-+. ...+.. ..+..+|+..|+-+|+..
T Consensus 86 ~------~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 86 H------TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred C------cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6 43211 011111 236678899999999854
No 153
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=66.90 E-value=17 Score=32.87 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=58.2
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEefi~~ 154 (256)
|---.+|++... .....|.++++-.... +........|..++..+..+..-+++++.|..+ .|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~- 79 (316)
T cd05592 6 GSFGKVMLAELK-----GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN- 79 (316)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC-
Confidence 444567888763 3467788888754320 011112234555555555666667788887643 7888988
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 80 -----gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05592 80 -----GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI 117 (316)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 655521 11111 2366789999999998654
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=66.86 E-value=54 Score=29.09 Aligned_cols=84 Identities=17% Similarity=0.223 Sum_probs=51.5
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCC-----------
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLK----------- 164 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt----------- 164 (256)
...+.++++.....+........|..+++.+..+.--.++++.|.. ..|.||++ +.+|.
T Consensus 50 ~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~------~~~L~~~i~~~~~~~~ 123 (307)
T cd05098 50 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS------KGNLREYLRARRPPGM 123 (307)
T ss_pred cceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCC------CCcHHHHHHhcCCccc
Confidence 3568888887543112233345688888888666666678877653 47778877 43321
Q ss_pred ---------CC-CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 165 ---------YS-ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 165 ---------~~-el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+ .+.- -.+..+||..|+.+|...+
T Consensus 124 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 161 (307)
T cd05098 124 EYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC 161 (307)
T ss_pred ccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 11 1221 1467788999999998653
No 155
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=66.82 E-value=18 Score=32.61 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=59.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCC--CccccccHHHHHHHHHHHHh--cCCCCceeEeeCC----eEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH--GERALESIITDSVIFTLLSE--RKLGPTLHGVFPG----GRI 148 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t--~e~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~n----GrI 148 (256)
.+..|-...+|++... ..+..|.++++-... ..........|..++..++. +..-.++++.|.. ..|
T Consensus 6 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 6 VLGRGHFGKVLLAEYK-----KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred EEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 3444555678888763 356789999875321 00112223345555555543 3344568888763 478
Q ss_pred EEeecCCCCCccccCC----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARSLK----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~Lt----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
.||++ |..|. ...+..+ .+..+|+..|+-+|...+
T Consensus 81 ~E~~~------~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i 122 (324)
T cd05589 81 MEYAA------GGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKI 122 (324)
T ss_pred EcCCC------CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 88988 55442 1122222 366788899999998654
No 156
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=66.72 E-value=20 Score=33.41 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=43.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|--..+|+++............|.+++............-.+|..++..++.+---.++++.|.. ..|.||+
T Consensus 42 ~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 121 (375)
T cd05104 42 TLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYC 121 (375)
T ss_pred eecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhc
Confidence 344555677888874211112345578888876432101111223688888888655555567887753 3677777
Q ss_pred c
Q psy15662 153 P 153 (256)
Q Consensus 153 ~ 153 (256)
+
T Consensus 122 ~ 122 (375)
T cd05104 122 C 122 (375)
T ss_pred c
Confidence 6
No 157
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=66.71 E-value=4.5 Score=35.21 Aligned_cols=63 Identities=16% Similarity=0.146 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccccCCC-CCCC-----ChHHHHHHHHHHHh-hcCCC
Q psy15662 122 TDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKARSLKY-SELT-----DPAISRKIAEKMAD-IHLMQ 188 (256)
Q Consensus 122 ~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr~Lt~-~el~-----dp~i~~~IA~~La~-lH~~~ 188 (256)
.|..++..|.+.|+ .|++|.+-.|-.|-|||+ .+|.++.. .+.. -..+..++...+.. +|...
T Consensus 57 ~E~~~L~~l~~~Gv~vP~p~~~~~~~ivME~I~----~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~g 127 (188)
T PF01163_consen 57 KEFRNLKRLYEAGVPVPKPYDYNRNVIVMEYIG----EDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAG 127 (188)
T ss_dssp HHHHHHHHCCCTT-SS--EEEEETTEEEEE--E----ETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCccCCcEEEEeCCEEEEEecC----CCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcC
Confidence 69999999999996 999999999999999999 23555542 1111 13455666664444 45543
No 158
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=66.63 E-value=22 Score=31.01 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=61.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|....+|++... .....+.++.+.... .....+...|..+++.+...++ +++++.|.. ..|.||++
T Consensus 13 lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i-i~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 13 LGDGAFGKVYKAQNK-----ETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNI-VKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred cccCCCeEEEEEEEC-----CCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCe-eeEEEEEeeCCEEEEEEEecC
Confidence 445666788888763 345677888876544 1233344567777777755444 456666542 47888988
Q ss_pred CCCCCccccCCC------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+..+ .+..+|+..|+.+|...+
T Consensus 86 ------~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i 124 (282)
T cd06643 86 ------GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI 124 (282)
T ss_pred ------CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 555421 112222 366789999999998653
No 159
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=66.57 E-value=26 Score=30.84 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=61.6
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
..+..|-...+|++... ..+..|.++++-..........-..|..+++.+...++- ++++.|.. ..|.||
T Consensus 11 ~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 11 DKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIV-TLHDIIHTERCLTLVFEY 84 (288)
T ss_pred eEEecCCCEEEEEEEEC-----CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEe-eEEEEEcCCCeEEEEEeC
Confidence 34555666778888753 356788888775332111122234688888887655554 57777754 378888
Q ss_pred ecCCCCCccccCC----CCC-CCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK----YSE-LTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt----~~e-l~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.-.. ... +.. ..+..+|+..|+-+|+..+
T Consensus 85 ~~------~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 124 (288)
T cd07871 85 LD------SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI 124 (288)
T ss_pred CC------cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 87 52111 011 111 2366789999999998654
No 160
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=66.54 E-value=16 Score=33.34 Aligned_cols=98 Identities=17% Similarity=0.214 Sum_probs=59.5
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|-...+|++... .....|.++++-.... .........|..++..+..+..-.++++.|.. ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~- 79 (329)
T cd05618 6 GSYAKVLLVRLK-----KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN- 79 (329)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC-
Confidence 445677888763 3467788888764320 01111233566666666666666678888753 47889998
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+..|.. ..+.. ..+..+||..|+-+|...+
T Consensus 80 -----~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i 117 (329)
T cd05618 80 -----GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI 117 (329)
T ss_pred -----CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 554421 11211 2366788899999998653
No 161
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=66.31 E-value=23 Score=31.12 Aligned_cols=99 Identities=16% Similarity=0.248 Sum_probs=59.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEef 151 (256)
+..|--..+|++... .....|.++++-.... ......-..|..+++.+. +.--+++++.|.++ .|.||
T Consensus 9 ig~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~ 82 (290)
T cd05580 9 LGTGSFGRVMLVRHK-----GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVMEY 82 (290)
T ss_pred eecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEEec
Confidence 333445578888763 3467888988743210 011222345777777776 44455688887653 78899
Q ss_pred ecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
++ +.+|. ...+... .+..+|+..|+.+|...
T Consensus 83 ~~------~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 83 VP------GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred CC------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 97 55442 1122222 25578999999999754
No 162
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=65.68 E-value=33 Score=28.84 Aligned_cols=105 Identities=20% Similarity=0.226 Sum_probs=64.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++....+. ......|.++++..............|..+++.+...++ .++++.|.. ..|.+|+
T Consensus 6 ~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 6 KLGEGAFGEVYKGTLKGLS-GEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-VKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred eeccCCCcceEEEEecCCC-CCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCeeEEEEecc
Confidence 3455667788888875321 122477889988655411123344568888888854444 567777653 4788888
Q ss_pred cCCCCCccccCCC-----CC--CCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SE--LTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~e--l~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. .. +.. ..+..+|+..|+.+|...+
T Consensus 84 ~------~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~ 124 (258)
T smart00219 84 E------GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF 124 (258)
T ss_pred C------CCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 8 544421 00 222 3466788899999998754
No 163
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=65.64 E-value=26 Score=30.69 Aligned_cols=107 Identities=17% Similarity=0.160 Sum_probs=59.8
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
..+..|-...+|++...+.........|.+++..........+.-.+|..+++.+... --+++++.|.. -.|.||
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCC-CeeeEEEEEcCCCCcEEEEeC
Confidence 3456677788998876432212234568888765332101111223466666666533 34567887752 477788
Q ss_pred ecCCCCCccccCCCCC---------------CC--C-hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKYSE---------------LT--D-PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~~e---------------l~--d-p~i~~~IA~~La~lH~~~i 189 (256)
++ +-+|..-- +. + -.+..+|+..|+-+|+..+
T Consensus 91 ~~------~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 140 (288)
T cd05061 91 MA------HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF 140 (288)
T ss_pred CC------CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77 44432110 00 0 1366788888999998654
No 164
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=65.43 E-value=28 Score=30.08 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=56.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-...+|++...+ ......++++................|..+++.+...++ .+++|.|.. ..|.||++
T Consensus 6 G~~g~Vy~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~--- 78 (269)
T cd05087 6 GWFGKVILGEVNS---GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-LQCLGQCTEVTPYLLVMEFCP--- 78 (269)
T ss_pred cCCceEEEEEEcC---CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-eeEEEEEcCCCCcEEEEECCC---
Confidence 3444678776532 233456777776543311111234457777777765444 467887753 58889998
Q ss_pred CCccccCCC--------CCCC-C----hHHHHHHHHHHHhhcCCC
Q psy15662 157 TRKARSLKY--------SELT-D----PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 157 ~~~gr~Lt~--------~el~-d----p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. .... + -.+..+||+.|+-+|...
T Consensus 79 ---~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (269)
T cd05087 79 ---LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120 (269)
T ss_pred ---CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 655521 1111 1 135678999999999754
No 165
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=65.26 E-value=16 Score=31.71 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=60.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
..+..|-...+|++... ..+..|+++++-...... ....-..|..+++.+..-++ +++++.|.. ..|.|
T Consensus 7 ~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 7 GLVGEGSYGMVMKCKHK-----ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-VNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred eeeccCCCeEEEEEEEC-----CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-hhHHHhcccCCeEEEEEe
Confidence 34444555678888763 346789999876543111 11112356677666654443 467777753 58889
Q ss_pred eecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +..|.. ..+.. -.+..+||..|+.+|+..+
T Consensus 81 ~~~------~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (286)
T cd07846 81 FVD------HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI 121 (286)
T ss_pred cCC------ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 998 554421 11212 2366689999999998654
No 166
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=65.02 E-value=27 Score=30.62 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=58.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC-----------
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----------- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----------- 145 (256)
+.-|-...+|++... ..+..|++++.-.... +....+...|..+++.+...++-+ +++.|..
T Consensus 15 lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~-~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 15 IGEGTYGQVYKARDK-----DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVN-LKEIVTDKQDALDFKKDK 88 (302)
T ss_pred ecccCCEEEEEEEEC-----CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeee-eeheecCcchhhhccccC
Confidence 334556778998874 3456788887753320 122334556888888776544443 6666532
Q ss_pred ---eEEEEeecCCCCCcccc---CC--CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 ---GRIEEYIPDKETRKARS---LK--YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ---GrIEefi~~~~~~~gr~---Lt--~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.+|++ +.. +. ...+.. -.+..+|+..|+.+|...+
T Consensus 89 ~~~~lv~e~~~------~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 137 (302)
T cd07864 89 GAFYLVFEYMD------HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF 137 (302)
T ss_pred CcEEEEEcccC------ccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 25888887 421 11 111222 2466789999999997654
No 167
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=64.93 E-value=22 Score=32.12 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=59.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
+..|---.+|++... .....|.++++..... +........|..++..+..+.+-+++++.|.. ..|.||
T Consensus 8 lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~ 82 (323)
T cd05616 8 LGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEY 82 (323)
T ss_pred EeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcC
Confidence 334445578888753 3467888888765320 01111123355555555556666678888764 378899
Q ss_pred ecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
++ +.+|.. ..+.. -.+..+||..|+-+|...
T Consensus 83 ~~------~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 121 (323)
T cd05616 83 VN------GGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG 121 (323)
T ss_pred CC------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 98 554421 11222 236778999999999864
No 168
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=64.08 E-value=29 Score=30.84 Aligned_cols=100 Identities=19% Similarity=0.257 Sum_probs=60.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc--ccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER--ALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~--~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
+..|-...+|++... ..+..|+++.+-...... .......|..+++.+..-+ -+++++.|.. ..|.+|
T Consensus 9 ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 9 LGKGDVGRVFLVRLK-----GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPF-LPTLYASFQTETYLCLVMDY 82 (316)
T ss_pred ecCCccEEEEEEEEc-----CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCC-chhheeeeecCCEEEEEEEe
Confidence 444666788988764 346789999886543100 1111235667777666444 3567777764 478888
Q ss_pred ecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ |.+|.. ..+.. ..+..+|++.|+.+|...+
T Consensus 83 ~~------~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 124 (316)
T cd05574 83 CP------GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI 124 (316)
T ss_pred cC------CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 88 554421 01111 1355789999999998653
No 169
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=63.89 E-value=45 Score=28.50 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=58.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc--------ccccHHHHHHHHHHHHhcCCCCceeEeeCC----
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER--------ALESIITDSVIFTLLSERKLGPTLHGVFPG---- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~--------~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---- 145 (256)
+..|-...+|++... .....|+++.+-...... ....-..|..+++.+...+ -+++++.|..
T Consensus 8 ig~g~~~~v~~a~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~ 81 (267)
T cd06628 8 IGSGSFGSVYLGMNA-----SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN-IVQYLGSSLDADHL 81 (267)
T ss_pred eecCCCeEEEEEEec-----CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCC-eeeEEEEEEeCCcc
Confidence 334556678888753 345678888765433100 1112234666666664433 3457777653
Q ss_pred eEEEEeecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 146 GRIEEYIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.+|. ...+..+ .+..+|+..|+.+|...+
T Consensus 82 ~lv~e~~~------~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i 127 (267)
T cd06628 82 NIFLEYVP------GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI 127 (267)
T ss_pred EEEEEecC------CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 47889998 65542 1122222 466788999999997654
No 170
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=63.58 E-value=31 Score=28.70 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=59.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEe 150 (256)
+..|-...+|++... .....|.++++-..... .....-..|..+++.+...++-+ +++.+.. ..+.|
T Consensus 8 i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~-~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 8 LGRGSFGSVYLALDK-----DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVR-YYGSERDEEKNTLNIFLE 81 (260)
T ss_pred eeecCceEEEEEEEC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEee-EEEEEecCCCCeEEEEEE
Confidence 444555577888763 34678999987654310 11223345777777777555544 5555443 27888
Q ss_pred eecCCCCCccccCCCC-----CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKYS-----ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~~-----el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|..- .+.. -.+..+++..|+.+|...+
T Consensus 82 ~~~------~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 82 YVS------GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred ecC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 887 5554311 1111 2477889999999998654
No 171
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=63.37 E-value=26 Score=29.63 Aligned_cols=95 Identities=16% Similarity=0.185 Sum_probs=57.4
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-...+|++... ....+.++++..............|..+++.+..-++ +++++.+.. ..|.||++
T Consensus 6 g~~g~vy~~~~~------~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~--- 75 (250)
T cd05085 6 GNFGEVFKGTLK------DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNI-VKLIGVCTQRQPIYIVMELVP--- 75 (250)
T ss_pred CCCceEEEEEec------CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCc-CeEEEEEecCCccEEEEECCC---
Confidence 555678888742 3567888887654321112234467777777754444 456776653 48889998
Q ss_pred CCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 157 TRKARSLKY------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 157 ~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+|+..|..+|...
T Consensus 76 ---~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 76 ---GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred ---CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 554431 11222 245667888888899754
No 172
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=63.32 E-value=18 Score=31.37 Aligned_cols=98 Identities=22% Similarity=0.277 Sum_probs=61.5
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCc
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRK 159 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~ 159 (256)
-.+|+++... ........|+|++......++...+...|..+++.+ ++--=.+++|++.+ ..|.||.+
T Consensus 13 g~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~~~------ 84 (259)
T PF07714_consen 13 GKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEYCP------ 84 (259)
T ss_dssp EEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE--T------
T ss_pred cEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccccccc------
Confidence 3578888762 113456789999996644222344555677778777 44444578888763 57899998
Q ss_pred cccCC-------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 160 ARSLK-------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 160 gr~Lt-------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+... .+..+||+.|+-||+..+
T Consensus 85 ~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i 124 (259)
T PF07714_consen 85 GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI 124 (259)
T ss_dssp TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred cccccccccccccccccccccccccccccccccccccccc
Confidence 55553 1233322 467899999999998654
No 173
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=63.32 E-value=41 Score=30.33 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=43.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--Ce---EEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--GG---RIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--nG---rIEef 151 (256)
.+..|-...+|++....-........|.+++.-.............|..++..+..+.--.++++.|. ++ .|.||
T Consensus 14 ~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey 93 (338)
T cd05102 14 VLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEF 93 (338)
T ss_pred EeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEec
Confidence 35556677889887421111233456888887543311122234468888877755444456777654 32 56788
Q ss_pred ec
Q psy15662 152 IP 153 (256)
Q Consensus 152 i~ 153 (256)
++
T Consensus 94 ~~ 95 (338)
T cd05102 94 CK 95 (338)
T ss_pred CC
Confidence 88
No 174
>PRK09902 hypothetical protein; Provisional
Probab=63.15 E-value=18 Score=32.62 Aligned_cols=65 Identities=11% Similarity=0.055 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhcCCCCceeEeeC---------CeEEEEeecCCCCCccccCCC---C-CCC------ChHHHHHHHHH
Q psy15662 120 IITDSVIFTLLSERKLGPTLHGVFP---------GGRIEEYIPDKETRKARSLKY---S-ELT------DPAISRKIAEK 180 (256)
Q Consensus 120 R~~E~~i~~~Ls~~glgPkl~g~F~---------nGrIEefi~~~~~~~gr~Lt~---~-el~------dp~i~~~IA~~ 180 (256)
-.+|..+++.|.+.|+..+-..++. .-.|.+-|+ |..+|.. + .+. ...+...||+.
T Consensus 66 f~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~-----g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ 140 (216)
T PRK09902 66 IVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMA-----GFISIADWYAQHAVSPYSDEVRQAMLKAVALA 140 (216)
T ss_pred HHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEEeCC-----CCccHHHHHhcCCcCCcchHHHHHHHHHHHHH
Confidence 4689999999999999655555554 235666666 3555521 1 111 13789999999
Q ss_pred HHhhcCCCC
Q psy15662 181 MADIHLMQI 189 (256)
Q Consensus 181 La~lH~~~i 189 (256)
+++||...+
T Consensus 141 ia~LH~~Gv 149 (216)
T PRK09902 141 FKKMHSVNR 149 (216)
T ss_pred HHHHHHCCC
Confidence 999998654
No 175
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=62.82 E-value=21 Score=30.53 Aligned_cols=94 Identities=15% Similarity=0.060 Sum_probs=55.7
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKET 157 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~ 157 (256)
..+|++... ..+..|+++++...... ........|..+++.+. +.--+++++.|.. ..+.+|.+
T Consensus 7 ~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~---- 76 (262)
T cd05572 7 GRVELVKVK-----SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCL---- 76 (262)
T ss_pred eEEEEEEEC-----CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCC----
Confidence 467878763 34678999998654310 11112345666676664 4444556777654 37888888
Q ss_pred CccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+... .+..+|+..|+.+|+..+
T Consensus 77 --~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 77 --GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred --CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 655531 112222 255678999999998553
No 176
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=62.59 E-value=25 Score=29.71 Aligned_cols=100 Identities=14% Similarity=0.166 Sum_probs=58.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+.-|-...+|++... ..+..+.++.+...... .....-.+|..+++.+...++ .++++.|.. ..|.||.
T Consensus 8 l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i-~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 8 IGEGSFGKIYLAKAK-----SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI-VTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ecCCCcceEEEEEEc-----CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh-hhhhheeccCCeEEEEEecC
Confidence 444556678888864 34567788877543200 011122367777777765444 456666653 3788888
Q ss_pred cCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. -.+..+|++.|+.+|...+
T Consensus 82 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (257)
T cd08225 82 D------GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI 122 (257)
T ss_pred C------CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 655421 01222 2355688999999998654
No 177
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=62.54 E-value=39 Score=29.85 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=58.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++...+ ......+.++............+...|..++..+..+.--.++++.|.. ..+.+|.+
T Consensus 10 lg~g~~g~v~~~~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 10 IGEGNFGQVIRAMIKK---DGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred ecCCCcceEEEEEecC---CCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 3445556788877532 1222345666654322111223445688888777555444578888753 37888888
Q ss_pred CCCCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...
T Consensus 87 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 87 ------YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred ------CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 544420 01111 235678889999999854
No 178
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=62.12 E-value=30 Score=29.88 Aligned_cols=101 Identities=12% Similarity=0.145 Sum_probs=60.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccc-cHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALE-SIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~i-dR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|-...+|++... ..+..|.+|++-......... .-..|..+++.+...++ .++++.|.. ..|.||
T Consensus 8 ~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 8 KIGEGSYGVVFKCRNR-----ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL-VNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred eecccCCeEEEEEEEC-----CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE-eeeeeEEeeCCEEEEEEec
Confidence 3445666788888753 346789999876433101111 12357777777654333 456777653 378889
Q ss_pred ecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +..|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 82 ~~------~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i 121 (286)
T cd07847 82 CD------HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC 121 (286)
T ss_pred cC------ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 88 543321 12222 2366788899999998653
No 179
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=61.90 E-value=18 Score=30.89 Aligned_cols=101 Identities=12% Similarity=0.140 Sum_probs=59.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|--..+|++... ..+..|.+|++-..... ........|..+++.+..-++ +++++.|.+ ..|.+
T Consensus 7 ~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 7 VIGKGAFGKVCIVQKR-----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-VNLWYSFQDEENMYLVVD 80 (258)
T ss_pred EeccCCCceEEEEEEc-----cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-HHHHHhhcCCCeEEEEEe
Confidence 3444555577888753 45788999988653210 112233456777776644443 445666653 36788
Q ss_pred eecCCCCCccccCCC----C-CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY----S-ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~----~-el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|.. . .+.. ..+..+|++.|+.+|...+
T Consensus 81 ~~~------~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i 121 (258)
T cd05578 81 LLL------GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGI 121 (258)
T ss_pred CCC------CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 888 654431 1 1222 2366789999999998653
No 180
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=61.53 E-value=31 Score=29.46 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=57.1
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~ 157 (256)
|--..+|++....+ ......+.++++-.............|..+++.+..-++ .++++++.+ ..|.+|++
T Consensus 6 G~~g~v~~~~~~~~--~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~v~e~~~---- 78 (257)
T cd05060 6 GNFGSVVKGVYLMK--SGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI-VRLIGVCKGEPLMLVMELAP---- 78 (257)
T ss_pred cCceeEEEeEeecc--CCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCe-eeEEEEEcCCceEEEEEeCC----
Confidence 44456777665322 123467889988755410011123356667776654444 457777654 47788887
Q ss_pred CccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 79 --~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 116 (257)
T cd05060 79 --LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116 (257)
T ss_pred --CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 444431 11222 3467788999999998653
No 181
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=61.43 E-value=27 Score=32.50 Aligned_cols=103 Identities=12% Similarity=0.102 Sum_probs=61.7
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEE
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRI 148 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrI 148 (256)
+..+.-|--..+|++... .....|.+++.-.... .........|..+++.+.. ..-+++++.|.. ..|
T Consensus 6 ~~~LG~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 6 IKTLGIGAFGEVCLACKV-----DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred EEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC-CCeeeeEEEEecCCEEEEE
Confidence 344555666788988763 4567889998754210 0112223457777776643 344567787764 368
Q ss_pred EEeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.||++ |..|.. .-+.. ..+..+|+..|+-+|...+
T Consensus 80 ~E~~~------gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~gi 122 (381)
T cd05626 80 MDYIP------GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGF 122 (381)
T ss_pred EecCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 89998 544321 11111 2356688889999998654
No 182
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=61.37 E-value=32 Score=29.61 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=58.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++..... ......+.++.......+....+-..|..+++.+...++ .++++.|.. ..|.||++
T Consensus 12 lg~g~~g~v~~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 12 IGAGEFGEVCSGRLKLP--GKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred ecccCCCceEEEEEecC--CCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEecCCccEEEEEcCC
Confidence 34455567888875321 122346778776543211122233456667766654444 457887753 47888998
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 89 ------~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (267)
T cd05066 89 ------NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY 127 (267)
T ss_pred ------CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 554421 11222 2355788999999997653
No 183
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=61.18 E-value=41 Score=29.20 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=57.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|.-..+|++... ..+..|.++++..........+-.+|..+++.+...++ .++++.|.. ..|.||+
T Consensus 11 ~ig~G~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 11 KIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-TKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred eEeecCCeEEEEEEEC-----CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCE-eEEEEEEEeCCeEEEEEEeC
Confidence 4455666688888653 34678889987654311111122346566665543333 356666542 4888999
Q ss_pred cCCCCCccccCC----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|. ...+..+ .+..+||..|+.+|...+
T Consensus 85 ~------~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 85 G------GGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred C------CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 8 54432 1122222 356678888889998653
No 184
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=61.05 E-value=21 Score=32.62 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=61.3
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCC--CccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH--GERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t--~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|-.-.+|++... ..+..|.++++-... ..........|..++..+. +..-+++++.|.. ..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 7 KVIGRGAFGEVRLVQKK-----DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred EEEEecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEEE
Confidence 34455666788888863 356789999875321 0011222335777777775 4444567888764 3677
Q ss_pred EeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
||++ |..|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 81 E~~~------~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 122 (364)
T cd05599 81 EYLP------GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY 122 (364)
T ss_pred CCCC------CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8888 544321 11222 2366788999999998653
No 185
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=60.99 E-value=73 Score=28.10 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCC-----------CCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC-
Q psy15662 78 LLGGLTNMLYHVTLLQPI-----------QSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~-----------~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n- 145 (256)
+..|-.-.+|++....+. ....+..|.+++...........+...|..++..+..-++ .++++.|..
T Consensus 13 lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~ 91 (304)
T cd05096 13 LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI-IRLLGVCVDE 91 (304)
T ss_pred ecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe-eEEEEEEecC
Confidence 334555667877653211 0123346888887654311122233467777777654443 357777652
Q ss_pred ---eEEEEeecCCCCCccccCCC---------CC---------------CC---ChHHHHHHHHHHHhhcCCCC
Q psy15662 146 ---GRIEEYIPDKETRKARSLKY---------SE---------------LT---DPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ---GrIEefi~~~~~~~gr~Lt~---------~e---------------l~---dp~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.+|.. .+ +. -..+..+||..|+-+|...+
T Consensus 92 ~~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 159 (304)
T cd05096 92 DPLCMITEYME------NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF 159 (304)
T ss_pred CceEEEEecCC------CCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 58888988 544421 00 00 02578899999999998654
No 186
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=60.98 E-value=35 Score=30.01 Aligned_cols=102 Identities=11% Similarity=0.159 Sum_probs=61.1
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
+..+..|....+|++... ..+..++++...... ........+|..+++.+..-++ .++++.|.. ..+.+
T Consensus 24 ~~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~v-v~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 24 FVKIGEGSTGIVCIATDK-----STGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNI-VEMYSSYLVGDELWVVME 96 (285)
T ss_pred ceEeccCCCeEEEEEEEC-----CCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCCh-heEEEEEEcCCeEEEEEe
Confidence 456777778888988753 345778888764322 0111112356666666654333 456666542 47888
Q ss_pred eecCCCCCccccCCCC----CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKYS----ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~~----el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|... .+.. -.+..+|+..|+-+|...+
T Consensus 97 ~~~------~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 97 FLE------GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ccC------CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 888 6655421 1111 2477889999999998654
No 187
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=60.96 E-value=31 Score=29.96 Aligned_cols=105 Identities=16% Similarity=0.133 Sum_probs=59.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi 152 (256)
.+..|....+|++.............|.++.+-.........+-..|..+++.+...++- ++++.|. ...|.||+
T Consensus 13 ~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~ 91 (277)
T cd05036 13 ALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIV-RLIGVSFERLPRFILLELM 91 (277)
T ss_pred ECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEe-eEEEEEccCCCcEEEEecC
Confidence 455677778999887531111245678888775432111122334566666666544443 5666554 24677888
Q ss_pred cCCCCCccccCCC------------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 153 PDKETRKARSLKY------------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 153 ~~~~~~~gr~Lt~------------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
+ |.+|.. ..+.-. .+..+|+..|+.+|...
T Consensus 92 ~------g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 136 (277)
T cd05036 92 A------GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH 136 (277)
T ss_pred C------CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 7 544431 011111 36778999999999865
No 188
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=60.63 E-value=34 Score=29.33 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=58.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+.-|-...+|++... .....|.++++..... ........|..+++.+...++ .++++.|.. ..|.||++
T Consensus 17 lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i-i~~~~~~~~~~~~~iv~e~~~ 89 (267)
T cd06646 17 VGSGTYGDVYKARNL-----HTGELAAVKIIKLEPG-DDFSLIQQEIFMVKECKHCNI-VAYFGSYLSREKLWICMEYCG 89 (267)
T ss_pred eecCCCeEEEEEEEC-----CCCeEEEEEEEecCcc-chHHHHHHHHHHHHhcCCCCe-eeeeEEEEeCCEEEEEEeCCC
Confidence 333556678888753 3467788998865442 122223456666666544444 356666542 35778888
Q ss_pred CCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|.-+|...+
T Consensus 90 ------~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (267)
T cd06646 90 ------GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGK 127 (267)
T ss_pred ------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 555531 11222 2356788999999998653
No 189
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=60.55 E-value=28 Score=30.20 Aligned_cols=100 Identities=14% Similarity=0.118 Sum_probs=58.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcccc-ccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERAL-ESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~-idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|-...+|++... ..+..|+++++......+.. ....+|..+++.+. +.--+++++.|.+ ..+.+|
T Consensus 6 ~l~~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 6 KIGEGTYGVVYKARDK-----LTGEIVALKKIRLETEDEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred EecCCCCeEEEEEEEc-----CCCCEEEEEEeecccccccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEec
Confidence 3455666778998863 34678899987643310111 22345777777775 3344567777653 367777
Q ss_pred ecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +. |.. ..+.. -.+..+|++.|+.+|...+
T Consensus 80 ~~------~~-l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 80 LD------LD-LKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred cC------cC-HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 76 31 110 11222 2366788999999998653
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=60.07 E-value=29 Score=30.13 Aligned_cols=94 Identities=10% Similarity=0.115 Sum_probs=56.7
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKET 157 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~ 157 (256)
..+|++... ..+..|.++++-..... .....-..|..+++.+. +..-.++++.|.. ..|.+|++
T Consensus 7 g~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~---- 76 (277)
T cd05577 7 GEVCACQVK-----ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMN---- 76 (277)
T ss_pred eeEEEEEEc-----CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCC----
Confidence 457777653 34678889987643200 11111235777777775 5555667777753 37889998
Q ss_pred CccccCC-----CC--CCCChH---HHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLK-----YS--ELTDPA---ISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt-----~~--el~dp~---i~~~IA~~La~lH~~~i 189 (256)
+.+|. .. .+.... +..++++.|.-+|...+
T Consensus 77 --~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 116 (277)
T cd05577 77 --GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI 116 (277)
T ss_pred --CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 65553 11 233222 45688899999998654
No 191
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=60.06 E-value=33 Score=29.97 Aligned_cols=103 Identities=18% Similarity=0.231 Sum_probs=59.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++...+-........+.++.+.... +....+-..|..+++.+...++ .++++.|.. ..+.||++
T Consensus 13 lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 90 (280)
T cd05092 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHI-VRFYGVCTEGRPLLMVFEYMR 90 (280)
T ss_pred cCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCC-ceEEEEEecCCceEEEEecCC
Confidence 34466678888865321112334567777766544 1233445567788887765554 456777663 46778887
Q ss_pred CCCCCccccCCC--------------------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY--------------------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~--------------------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+..+ .+..+|+..++-+|...
T Consensus 91 ------~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~ 142 (280)
T cd05092 91 ------HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH 142 (280)
T ss_pred ------CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 444320 112222 35568888899999765
No 192
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=59.85 E-value=68 Score=27.60 Aligned_cols=98 Identities=11% Similarity=0.145 Sum_probs=57.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~ 157 (256)
|--..+|++.... ...+..|.+++.-..........-..|..+++.+...++ .++++.+.. ..|.||++
T Consensus 6 G~~g~v~~~~~~~---~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-i~~~~~~~~~~~~lv~e~~~---- 77 (257)
T cd05115 6 GNFGCVKKGVYKM---RKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI-VRMIGVCEAEALMLVMEMAS---- 77 (257)
T ss_pred CCcccEEEEEEec---CCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCe-EEEEEEEcCCCeEEEEEeCC----
Confidence 3445677765432 123456888887655411111223467788887754444 346777654 47888998
Q ss_pred CccccCCC------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 158 RKARSLKY------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 158 ~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...
T Consensus 78 --~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 115 (257)
T cd05115 78 --GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN 115 (257)
T ss_pred --CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 655542 11121 246678999999999865
No 193
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=59.82 E-value=33 Score=29.76 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=45.9
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCCC------C--
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKYS------E-- 167 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~~------e-- 167 (256)
...|.++++-.............|..+++.+...++ .++++.|.. -.|.||++ +.+|..- .
T Consensus 36 ~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-v~~~~~~~~~~~~~lv~e~~~------~~~L~~~~~~~~~~~~ 108 (277)
T cd05062 36 ETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-VRLLGVVSQGQPTLVIMELMT------RGDLKSYLRSLRPEME 108 (277)
T ss_pred eeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-eeEEEEEcCCCCeEEEEecCC------CCCHHHHHHHcCcccc
Confidence 456888876432200111223456677776654444 467777764 37788888 5544210 0
Q ss_pred -------CC---ChHHHHHHHHHHHhhcCCC
Q psy15662 168 -------LT---DPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 168 -------l~---dp~i~~~IA~~La~lH~~~ 188 (256)
+. --.+..++|..|+.+|...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 139 (277)
T cd05062 109 NNPVQAPPSLKKMIQMAGEIADGMAYLNANK 139 (277)
T ss_pred ccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 00 0135668999999999854
No 194
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=59.79 E-value=73 Score=27.15 Aligned_cols=98 Identities=20% Similarity=0.189 Sum_probs=59.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... ....|+++..-... ........|..+++.+...++- ++++.+.. ..+.+|+
T Consensus 13 ~lg~g~~g~v~~~~~~------~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 13 KLGAGQFGEVWMGYYN------NSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLV-RLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred ecCCcCCceEEEEEec------CCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCee-eEEEEEcCCCCcEEEEecC
Confidence 4444556688888753 24568888765543 1222334677788777655554 46666653 4788888
Q ss_pred cCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 84 ~------~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i 124 (261)
T cd05072 84 A------KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124 (261)
T ss_pred C------CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8 544321 11222 2356789999999998653
No 195
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=59.41 E-value=37 Score=29.54 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|..-.+|++... .....|++|++-... ........|..+++.+...++ .++++.|.. ..|.+|++
T Consensus 27 l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 98 (286)
T cd06614 27 IGEGASGEVYKATDR-----ATGKEVAIKKMRLRK--QNKELIINEILIMKDCKHPNI-VDYYDSYLVGDELWVVMEYMD 98 (286)
T ss_pred ccCCCCeEEEEEEEc-----cCCcEEEEEEEecCc--hhHHHHHHHHHHHHHCCCCCe-eEEEEEEEECCEEEEEEeccC
Confidence 334444567888763 346789999986544 212233467777777754443 456666542 47778887
Q ss_pred CCCCCccccCCC----C--CCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY----S--ELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~----~--el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. . .+..+ .+..+||..|+.+|...+
T Consensus 99 ------~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi 137 (286)
T cd06614 99 ------GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV 137 (286)
T ss_pred ------CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 655531 1 23332 367789999999998654
No 196
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=59.31 E-value=44 Score=28.95 Aligned_cols=105 Identities=12% Similarity=0.168 Sum_probs=57.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeec
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIP 153 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~ 153 (256)
.+..|-...+|++...... ......|.+++.-..........-..|..++..+...++ +++++.+.+ ..+.+|++
T Consensus 14 ~lg~G~~g~vy~~~~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~l~~~~~~ 91 (279)
T cd05109 14 VLGSGAFGTVYKGIWIPDG-ENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV-CRLLGICLTSTVQLVTQLMP 91 (279)
T ss_pred ecCCCCCceEEEEEEecCC-CccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCC-ceEEEEEcCCCcEEEEEcCC
Confidence 4455666789999864211 111224778876543311111122345555555554444 456776643 47788888
Q ss_pred CCCCCccccCCCC------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKYS------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~~------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|... .+.. -.+..+|+..|+-+|+..+
T Consensus 92 ------~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 130 (279)
T cd05109 92 ------YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL 130 (279)
T ss_pred ------CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4433211 1111 1367899999999998654
No 197
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=58.96 E-value=36 Score=29.94 Aligned_cols=101 Identities=8% Similarity=0.048 Sum_probs=59.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIE 149 (256)
..+..|-...+|++... ..+..|.++++...... ........|..+++.+....+- ++++.|. ...|.
T Consensus 6 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv-~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 6 RVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVV-SLAYAYETKDALCLVL 79 (285)
T ss_pred EEEecCCCEEEEEEEEe-----cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEE-EEEEEEccCCeEEEEE
Confidence 34545666778888863 34678899987643200 0111223577777777655444 4555554 24888
Q ss_pred EeecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 150 EYIPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+|++ +.+|.. ..+.. -.+..+|+..|+-+|+..
T Consensus 80 e~~~------~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 80 TIMN------GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred EecC------CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 8998 555521 11222 235668888899999864
No 198
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=58.94 E-value=39 Score=30.13 Aligned_cols=94 Identities=12% Similarity=0.072 Sum_probs=55.3
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-.-.+|++... ..+..+.++.......+........|..+++.+..-++ .++++.|.. ..+.||++
T Consensus 12 G~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~ey~~--- 82 (308)
T cd06615 12 GNGGVVTKVLHR-----PSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-VGFYGAFYSDGEISICMEHMD--- 82 (308)
T ss_pred CCCeEEEEEEEc-----CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-CeEEEEEeeCCEEEEEeeccC---
Confidence 444467777653 34567788887654311111223467777777754444 456666642 37888888
Q ss_pred CCccccCCC-----CCCCC---hHHHHHHHHHHHhhcC
Q psy15662 157 TRKARSLKY-----SELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 157 ~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~ 186 (256)
|.+|.. ..+.. ..+..+|++.|+.+|.
T Consensus 83 ---~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 117 (308)
T cd06615 83 ---GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE 117 (308)
T ss_pred ---CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 655531 11111 2567788999999996
No 199
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=58.76 E-value=14 Score=32.82 Aligned_cols=101 Identities=10% Similarity=0.158 Sum_probs=60.0
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
..+..|-...+|++... ..+..|++|....... ........|..+++.+..-++ .++++.|.. ..|.||
T Consensus 28 ~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i-i~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 28 IKIGEGSTGIVCIATEK-----HTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHENV-VDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred hcccCCCCeEEEEEEEC-----CCCCEEEEEEEecchH-HHHHHHHHHHHHHHhCCCCcH-HHHHHheecCCeEEEEEeC
Confidence 34556666778888753 3467888988765431 222233467777766644333 345555442 478888
Q ss_pred ecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 101 ~~------~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i 139 (292)
T cd06658 101 LE------GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGV 139 (292)
T ss_pred CC------CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 88 554421 11222 2466788899999998654
No 200
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=58.57 E-value=47 Score=28.72 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=59.6
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
..+..|-...+|++... ..+..|.++.+....... .......|..+++.+..-++ .++++.|.+ ..|.|
T Consensus 6 ~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 6 EKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-VKLLDVIHTENKLYLVFE 79 (284)
T ss_pred eeecCCCceEEEEEEEC-----CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCC-cchhhhcccCCcEEEEee
Confidence 44566777788998763 346788888876433101 11233468888887754443 456777654 37777
Q ss_pred eecCCCCCccccC------CCCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 151 YIPDKETRKARSL------KYSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 151 fi~~~~~~~gr~L------t~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
|++ +.-. ....+.. -.+..+|+..|+-+|...
T Consensus 80 ~~~------~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 80 FLH------QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred ccc------cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 876 3210 0112222 235678889999999765
No 201
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=58.53 E-value=29 Score=29.87 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=58.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|-...+|++... ..+..+.++.+....... .......|..+++.+..-++ .++++.+.. ..|.+|
T Consensus 6 ~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 6 KIGEGTYGVVYKARDK-----LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI-IKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred eeecCCCceEEEEEcC-----CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCc-chHHHhhccCCCEEEEEec
Confidence 3444556678888763 356788898876543110 12233457777777763333 346665543 377788
Q ss_pred ecCCCCCccccCC---C--CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK---Y--SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt---~--~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+ +..+. . ..+.. -.+..+|+..|+.+|...+
T Consensus 80 ~~------~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (283)
T cd05118 80 MD------TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119 (283)
T ss_pred cC------CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 77 43111 1 12222 2467789999999998664
No 202
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=58.40 E-value=30 Score=29.24 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=58.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|-...+|++... .....|.++.+..... .....+-..|..+++.+...++- ++++.|.. ..|.||+
T Consensus 8 l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 8 IGKGSFGVVFKVVRK-----ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYII-RYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ecCCCCeEEEEEEEc-----CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCee-hheeeeccCCEEEEEEEeC
Confidence 344555578998863 3467888988754321 01222233566666666544443 45666542 4788888
Q ss_pred cCCCCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|.. ..+... .+..+||..|+.+|...+
T Consensus 82 ~------~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i 122 (256)
T cd08529 82 E------NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI 122 (256)
T ss_pred C------CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 655421 112222 456788899999998654
No 203
>KOG1989|consensus
Probab=58.30 E-value=33 Score=36.31 Aligned_cols=110 Identities=21% Similarity=0.250 Sum_probs=69.2
Q ss_pred cceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC------
Q psy15662 72 DSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP------ 144 (256)
Q Consensus 72 ~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~------ 144 (256)
.++|+ .|.-|-==.+|-+....+ ..+-+|.|.|...- +.+-...+|..+++.|+-+ |.+++++.
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~----~~~~AlKrm~~~de--~~L~~v~~EI~~MK~L~gh---~nIV~yidss~~~~ 108 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKG----GKKYALKRMYVNDE--EALNAVKREIDIMKLLSGH---KNIVSYIDSSAINR 108 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCC----CceeeeeeeecCCH--HHHHHHHHHHHHHHHhcCC---CceeeEeccccccc
Confidence 34444 344444456777776421 15678899999843 7888888999999999865 55666665
Q ss_pred --CeEEEEeecCCC------------CCccccCCCCCCCChHHHHHHHHHHHhhcCCCCCCC
Q psy15662 145 --GGRIEEYIPDKE------------TRKARSLKYSELTDPAISRKIAEKMADIHLMQIPVV 192 (256)
Q Consensus 145 --nGrIEefi~~~~------------~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ip~~ 192 (256)
++-+.|++==|| +|-..-|+..++ -.|...+++.++.||.+..|+-
T Consensus 109 ~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eV--LkIf~dv~~AVa~mH~~~pPiI 168 (738)
T KOG1989|consen 109 SSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEV--LKIFYDVCEAVAAMHYLKPPII 168 (738)
T ss_pred cCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHH--HHHHHHHHHHHHHHhcCCCccc
Confidence 221333322233 222233444333 2578899999999999987753
No 204
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=57.92 E-value=41 Score=30.00 Aligned_cols=83 Identities=18% Similarity=0.251 Sum_probs=49.6
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC----------
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY---------- 165 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~---------- 165 (256)
...+.++++..........+...|..+++.+.++.--.++++.|.. ..+.||++ +.+|..
T Consensus 44 ~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~------~g~L~~~i~~~~~~~~ 117 (314)
T cd05099 44 TVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAA------KGNLREFLRARRPPGP 117 (314)
T ss_pred ceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCC------CCcHHHHHHhcCCCcc
Confidence 4567778766433112233345687778777655555678877653 36777887 444321
Q ss_pred -----------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 166 -----------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 166 -----------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
..+... .+..+|+..|+.+|...
T Consensus 118 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g 154 (314)
T cd05099 118 DYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR 154 (314)
T ss_pred cccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111211 35678999999999854
No 205
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=57.80 E-value=43 Score=28.95 Aligned_cols=100 Identities=13% Similarity=0.090 Sum_probs=56.7
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|-...+|++...+ +.....+.++.+..........+-..|..++..++.+.--.++++.|.. ..+.||++
T Consensus 5 ~g~~g~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~-- 79 (270)
T cd05047 5 EGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP-- 79 (270)
T ss_pred CCCCceEEEEEEcC---CCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC--
Confidence 34455778877632 1122345666654322111223344688888888655445578888763 47888888
Q ss_pred CCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 156 ETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 156 ~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+|+..|+-+|...
T Consensus 80 ----~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 132 (270)
T cd05047 80 ----HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 132 (270)
T ss_pred ----CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 443310 01222 235667888999999754
No 206
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=57.54 E-value=92 Score=26.71 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=59.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|....+|++..... ......|.+++......+........|..+++.+...++ .++++.|.+ ..|.||++
T Consensus 12 lg~g~~g~vy~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 12 IGAGEFGEVCRGRLKLP--GKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-IHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred ecCCCCCeEEEEEEecC--CCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-ceEEEEECCCCceEEEEecCC
Confidence 44466668898886431 112346888887654211122233457777777654443 457777654 36788888
Q ss_pred CCCCCccccCC------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+..+ .+..+++..++.+|...+
T Consensus 89 ------~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~ 127 (269)
T cd05065 89 ------NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY 127 (269)
T ss_pred ------CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 55543 1122222 345678888889997643
No 207
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=57.48 E-value=17 Score=31.47 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=58.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCCe----EEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPGG----RIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG----rIEef 151 (256)
.+..|-...+|++... ..+..|+++++-.... +....+...|..+++.+. +.--+++++.|..+ .|.+|
T Consensus 7 ~l~~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 7 RIGEGAHGIVFKAKDR-----ETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred ecccCCCcEEEEEEEC-----CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEecc
Confidence 3455667788988863 3467888888754321 012234456777777776 33345678777643 56666
Q ss_pred ecCCCCCccccC-----CCCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSL-----KYSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~L-----t~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+. +.-. ...-+.. -.+..+|++.|+.+|...
T Consensus 81 ~~------~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (286)
T cd07832 81 MP------SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG 119 (286)
T ss_pred cC------CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 64 2210 0011111 246678999999999865
No 208
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=57.44 E-value=44 Score=27.98 Aligned_cols=98 Identities=17% Similarity=0.189 Sum_probs=58.7
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETR 158 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~ 158 (256)
--.+|++..... ......|.++++...........-..|..++..++ +.--.++++.+.. ..|.+|.+
T Consensus 8 ~g~v~~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~----- 79 (262)
T cd00192 8 FGEVYKGKLKGK--DGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYME----- 79 (262)
T ss_pred ceEEEEEEEecC--CCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEecc-----
Confidence 346777776421 12367788888876542110222345777777777 4444567777665 58888887
Q ss_pred ccccCCC--------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLKY--------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt~--------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 80 -~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 126 (262)
T cd00192 80 -GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF 126 (262)
T ss_pred -CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 555431 11111 2477788889999998553
No 209
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=57.35 E-value=40 Score=28.47 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=57.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|--..+|++... .....++++.+..... ......-..|..+++.+..-++ .++++.|.+ ..|.||+
T Consensus 8 lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 8 VGRGAFGIVHLCRRK-----ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI-IEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ecccCceEEEEEEEc-----CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCch-hheeeeEecCCEEEEEEecC
Confidence 344444567887753 3467788877643320 0112223356777776654344 356776653 4788898
Q ss_pred cCCCCCccccCC-------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK-------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt-------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|. ...+... .+..++++.|+.+|...+
T Consensus 82 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i 122 (256)
T cd08220 82 P------GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI 122 (256)
T ss_pred C------CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8 65432 1112222 355688999999997543
No 210
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=57.13 E-value=30 Score=34.32 Aligned_cols=63 Identities=21% Similarity=0.261 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhcCCCC-ceeEee--CCeEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 121 ITDSVIFTLLSERKLGP-TLHGVF--PGGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 121 ~~E~~i~~~Ls~~glgP-kl~g~F--~nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
..|..+++.+...++.. .++... ....|.||++ |.+|...--....+..+||+.|+.+|...+
T Consensus 384 ~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~------g~~L~~~l~~~~~~~~~i~~~L~~lH~~gi 449 (535)
T PRK09605 384 RAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIG------GKDLKDVLEGNPELVRKVGEIVAKLHKAGI 449 (535)
T ss_pred HHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecC------CCcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46888888888888654 444444 3468999999 888753211246688999999999998653
No 211
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=57.02 E-value=43 Score=29.94 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=59.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecC
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPD 154 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~ 154 (256)
+..|-...+|++...... ......|.+++.-..+..........|..+++.+...++- +++|.+.. ..|.+|++
T Consensus 15 lg~G~~g~Vy~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~g~~~~~~~~~v~e~~~- 91 (316)
T cd05108 15 LGSGAFGTVYKGLWIPEG-EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC-RLLGICLTSTVQLITQLMP- 91 (316)
T ss_pred eecCCCceEEEEEEecCC-CccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCC-eEEEEEcCCCceeeeecCC-
Confidence 444556688988753211 1223458888876543111122233567777777555554 57887643 47888888
Q ss_pred CCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. -.+..+||..|+-+|+..+
T Consensus 92 -----~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 92 -----FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred -----CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 44332 111222 2456799999999998653
No 212
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=56.73 E-value=48 Score=27.91 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=55.1
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeC---C---eEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFP---G---GRIE 149 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---n---GrIE 149 (256)
.+..|--..+|++... ..+..|++++...... +........|..+++.+...++ .++++.|. + ..+.
T Consensus 7 ~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 7 TIGKGSFGTVRKVRRK-----SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI-VRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred eeccCCCeEEEEeeec-----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcc-ceeeeeeecCCCCEEEEEe
Confidence 3444555678888763 3456788887653321 0111112346666666655454 45666552 2 3688
Q ss_pred EeecCCCCCccccCC---------CCCCCC---hHHHHHHHHHHHhhc
Q psy15662 150 EYIPDKETRKARSLK---------YSELTD---PAISRKIAEKMADIH 185 (256)
Q Consensus 150 efi~~~~~~~gr~Lt---------~~el~d---p~i~~~IA~~La~lH 185 (256)
||++ +.+|. ...+.. -.+..+|++.|+.+|
T Consensus 81 e~~~------~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 81 EYCE------GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred hhcc------CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 8888 55442 112222 236678999999999
No 213
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=56.64 E-value=29 Score=30.59 Aligned_cols=99 Identities=10% Similarity=0.059 Sum_probs=56.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+.-|-...+|++... .....|.++++-.............|..++..+..+.--+++++.|.. ..+.+|+
T Consensus 22 ~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 96 (296)
T cd06618 22 EIGSGTCGQVYKMRFK-----KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM 96 (296)
T ss_pred EeeccCCeEEEEEEEC-----CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence 4555667788998864 336778888875432101111122344444444444455678888754 3677777
Q ss_pred cCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcC
Q psy15662 153 PDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 153 ~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~ 186 (256)
+ +...+ ...+.. -.+..+||+.|+.+|.
T Consensus 97 ~------~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 97 S------TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred C------cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 6 41000 011111 2478889999999996
No 214
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=56.62 E-value=69 Score=27.05 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=56.8
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-...+|++... . .+.|.+|++..............|..+++.+...++ .++++.|.. ..|.+|++
T Consensus 6 g~~g~v~~~~~~-----~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~--- 75 (251)
T cd05041 6 GNFGDVYKGVLK-----G-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-VKLIGVCVQKQPIYIVMELVP--- 75 (251)
T ss_pred CCCceEEEEEEe-----C-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-EEEEEEEecCCCeEEEEEcCC---
Confidence 334467888753 3 688999987655410011233456666666654333 456777653 48888988
Q ss_pred CCccccCC------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLK------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|. ...+... .+..+++..++.+|...+
T Consensus 76 ---~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 114 (251)
T cd05041 76 ---GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC 114 (251)
T ss_pred ---CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 66552 1223322 355577888889997543
No 215
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=56.41 E-value=72 Score=28.00 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=60.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIE 149 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIE 149 (256)
+..|....+|++.... ......|.++++-.... +........|..+++.+...++. ++++.|.. ..|.
T Consensus 8 ig~g~~g~v~~~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv~ 83 (316)
T cd07842 8 IGRGTYGRVYKAKRKN---GKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVV-SLVEVFLEHADKSVYLLF 83 (316)
T ss_pred eccCCcEEEEEEEecC---CCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCcc-ceEEEEeCCCCceEEEEE
Confidence 4456677788888642 11567899998876320 01223345677777777655554 46776643 3778
Q ss_pred EeecCCCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
||++ +..+.. ..+... .+..+|+..|+-+|+..+
T Consensus 84 e~~~------~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 129 (316)
T cd07842 84 DYAE------HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV 129 (316)
T ss_pred eCCC------cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 8877 432210 022222 366788999999998653
No 216
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=56.26 E-value=67 Score=28.24 Aligned_cols=106 Identities=17% Similarity=0.181 Sum_probs=60.1
Q ss_pred eecCccccceeEEEeecC-----------CCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC
Q psy15662 77 TLLGGLTNMLYHVTLLQP-----------IQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~-----------~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n 145 (256)
.+..|-...+|++..... .....+..+.++++..........+-..|..+++.+...++- +++++|..
T Consensus 12 ~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~~~~~~ 90 (296)
T cd05095 12 KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII-RLLAVCIT 90 (296)
T ss_pred eccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc-eEEEEEec
Confidence 344555667777653210 002234567888887543111222334688888888665554 57777643
Q ss_pred ----eEEEEeecCCCCCccccCCCC-------C---------C---CChHHHHHHHHHHHhhcCCCC
Q psy15662 146 ----GRIEEYIPDKETRKARSLKYS-------E---------L---TDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ----GrIEefi~~~~~~~gr~Lt~~-------e---------l---~dp~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.+|..- . + .--.+..+|+..|+.+|...+
T Consensus 91 ~~~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 151 (296)
T cd05095 91 SDPLCMITEYME------NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF 151 (296)
T ss_pred CCccEEEEEeCC------CCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 47788887 5444210 0 0 013466788899999998653
No 217
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=56.20 E-value=32 Score=33.63 Aligned_cols=65 Identities=17% Similarity=0.227 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcC----CCCceeEe--eC------CeEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 122 TDSVIFTLLSERK----LGPTLHGV--FP------GGRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 122 ~E~~i~~~Ls~~g----lgPkl~g~--F~------nGrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~i 189 (256)
+|....+++.+.+ .-|++|+. |. |-.+.||++ |.+++..-+=-+++=..+|++.||+||...+
T Consensus 115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve-----n~~~~~~~e~~~~eql~~iv~aLA~~~A~sl 189 (414)
T PF07914_consen 115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE-----NVHSMDMYENLSVEQLLQIVRALAKFHALSL 189 (414)
T ss_pred HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC-----CceeecccCCCCHHHHHHHHHHHHHHHHhHc
Confidence 4666666777765 57899986 32 458899999 4677776665566667799999999999765
Q ss_pred CC
Q psy15662 190 PV 191 (256)
Q Consensus 190 p~ 191 (256)
..
T Consensus 190 ~l 191 (414)
T PF07914_consen 190 KL 191 (414)
T ss_pred cC
Confidence 54
No 218
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=56.06 E-value=38 Score=28.92 Aligned_cols=100 Identities=13% Similarity=0.154 Sum_probs=58.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCC--CccccccHHHHHHHHHHHHhcCCCCceeEeeC-C---eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH--GERALESIITDSVIFTLLSERKLGPTLHGVFP-G---GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t--~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n---GrIEef 151 (256)
+..|-...+|++... .....|.++..-... ......+...|..+++.+..-++ +++++.|. + ..+.+|
T Consensus 10 l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08228 10 IGRGQFSEVYRATCL-----LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV-IKYLDSFIEDNELNIVLEL 83 (267)
T ss_pred eccCCCeeEEEEEEe-----CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcce-eeeeeeEEECCeEEEEEEe
Confidence 334556678888863 345777777543211 00122234567777777754444 45666653 2 478889
Q ss_pred ecCCCCCccccCC---------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK---------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt---------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|. ...+... .+..+|++.|+.+|...+
T Consensus 84 ~~------~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 127 (267)
T cd08228 84 AD------AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV 127 (267)
T ss_pred cC------CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 88 55442 1112222 466789999999998653
No 219
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=56.02 E-value=51 Score=28.09 Aligned_cols=99 Identities=10% Similarity=0.153 Sum_probs=58.5
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-----cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-----RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-----~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..|--..+|++... .++..|.+++.-..... .....-..|..+++.+...++ .++++.|.. ..|.
T Consensus 9 g~g~~~~v~~~~~~-----~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~~v~ 82 (268)
T cd06630 9 GTGAFSSCYQARDV-----KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI-IRMLGATCEDSHFNLFV 82 (268)
T ss_pred cCcCceEEEEEEEc-----CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCce-ehhhceeccCCeEEEEE
Confidence 34555567777642 34677888776532210 011222457777777755555 467777753 4788
Q ss_pred EeecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+|.+ |.+|.. ..+..+ .+..+|+..|+.+|...+
T Consensus 83 e~~~------~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i 124 (268)
T cd06630 83 EWMA------GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQI 124 (268)
T ss_pred eccC------CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8888 665531 112222 356899999999998754
No 220
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=56.00 E-value=7.4 Score=31.29 Aligned_cols=20 Identities=35% Similarity=0.635 Sum_probs=17.5
Q ss_pred EEEEEeccceeeeeEEEEec
Q psy15662 22 ICVKRMSGGLTNMLYHVTLL 41 (256)
Q Consensus 22 i~v~~isggltN~l~~v~~~ 41 (256)
++|++++||.+|.+|.++.+
T Consensus 1 ~~~~~l~~G~~~~vy~~~~~ 20 (170)
T cd05151 1 IHISPLKGGMTNKNYRVEVA 20 (170)
T ss_pred CceeecCCcccCceEEEEEC
Confidence 47899999999999998764
No 221
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=55.98 E-value=43 Score=29.70 Aligned_cols=101 Identities=11% Similarity=0.130 Sum_probs=58.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|--...|++... .....|.++..-..+.. ........|..+++.+..-++ +++++.|.. -.|.|
T Consensus 8 ~l~~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 8 LISNGAYGAVYLVRHK-----ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-VSMFCSFETKRHLCMVME 81 (305)
T ss_pred EeecCCCeeEEEEEEC-----CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-eeeEEEEecCCEEEEEEe
Confidence 3444545577887763 34677888876543310 011122256666666644433 567888754 37889
Q ss_pred eecCCCCCccccCC----C-CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLK----Y-SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt----~-~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|. . .-+.. ..+..+|+..|+.+|+..+
T Consensus 82 ~~~------g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 122 (305)
T cd05609 82 YVE------GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGI 122 (305)
T ss_pred cCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 998 65542 1 11212 2345678889999998653
No 222
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=55.75 E-value=39 Score=31.25 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=59.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCC--CccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH--GERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t--~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|-...+|++... ..+..|.+++.-... ..+.+.....|..+++.+. +..-+++++.|.+ ..|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 7 KVIGKGAFGEVRLVQKK-----DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred EEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEEE
Confidence 34444555678888763 356788888764321 0011112235777766654 3445678888864 3788
Q ss_pred EeecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
||++ |.+|.. .-+... .+..+|+..|+.+|+..+
T Consensus 81 E~~~------gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi 122 (377)
T cd05629 81 EFLP------GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGF 122 (377)
T ss_pred eCCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 9998 554421 112211 256688888899998654
No 223
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=55.69 E-value=63 Score=26.33 Aligned_cols=99 Identities=20% Similarity=0.208 Sum_probs=59.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi 152 (256)
+..|-...+|++... .....+.++.+..... . ...+-..|..+++.+...++- ++++.+. ...+.+|.
T Consensus 7 i~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~i~-~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 7 LGEGAFGKVYLARDK-----GTGELVAVKVLKKEKT-EKQREEFLREIRILKKLKHPNIV-KLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred eecCCCeEEEEEEEc-----CCCcEEEEEeeccccc-hHHHHHHHHHHHHHHhCCCCChh-hheeeeecCCceEEEEecc
Confidence 334445678888864 3467899999987651 1 233445677777777544444 3454443 35788888
Q ss_pred cCCCCCccccCCCC-----C-CCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKYS-----E-LTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~-----e-l~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|..- . +.. ..+..+++..++.+|...+
T Consensus 80 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 80 E------GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred C------CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8 5333210 0 111 2456678888888998643
No 224
>KOG1187|consensus
Probab=55.29 E-value=64 Score=30.74 Aligned_cols=95 Identities=21% Similarity=0.219 Sum_probs=63.6
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--C---eEEEEeecCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--G---GRIEEYIPDK 155 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n---GrIEefi~~~ 155 (256)
|-.-..|+-... .+..|.|+..-.... ...-+..+|..++..++-.++- +|+|+.. + -.|+||++
T Consensus 86 Ggfg~VYkG~l~------~~~~vAVK~~~~~~~-~~~~eF~~Ei~~ls~l~H~Nlv-~LlGyC~e~~~~~~LVYEym~-- 155 (361)
T KOG1187|consen 86 GGFGTVYKGVLS------DGTVVAVKRLSSNSG-QGEREFLNEVEILSRLRHPNLV-KLLGYCLEGGEHRLLVYEYMP-- 155 (361)
T ss_pred CCCeEEEEEEEC------CCCEEEEEEecCCCC-cchhHHHHHHHHHhcCCCcCcc-cEEEEEecCCceEEEEEEccC--
Confidence 336778888764 236788886655442 1023456899999888866665 5899864 2 47999999
Q ss_pred CCCccccCCCCCCCC----------hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKYSELTD----------PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~~el~d----------p~i~~~IA~~La~lH~~~i 189 (256)
|| +|...-... -.|+..||+.|+-||....
T Consensus 156 ---nG-sL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~ 195 (361)
T KOG1187|consen 156 ---NG-SLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCP 195 (361)
T ss_pred ---CC-CHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCC
Confidence 34 554221111 2689999999999999543
No 225
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=54.91 E-value=19 Score=31.82 Aligned_cols=101 Identities=13% Similarity=0.070 Sum_probs=58.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|-...+|++... ..+..|+++++..... ........+|..+++.+...++- ++++.+.+ ..|.|
T Consensus 8 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv-~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 8 TVGTGTFGRVHLVRDR-----ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFII-RLFWTEHDQRFLYMLME 81 (291)
T ss_pred eeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHh-hhHhhhccCCeEEEEEe
Confidence 3445666688888763 3467899998753210 00111223577777766544443 45666543 36788
Q ss_pred eecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+.. ..+..+|+..|+.+|+..+
T Consensus 82 ~~~------~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 122 (291)
T cd05612 82 YVP------GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEI 122 (291)
T ss_pred CCC------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 888 544321 11222 2366789999999998653
No 226
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=54.85 E-value=38 Score=30.76 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=57.5
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|-.-.+|++... ..+..|.++++..... +........|..+++.+...++ .++++.|.. ..|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-v~~~~~~~~~~~~~lv~Ey~~- 78 (328)
T cd05593 6 GTFGKVILVREK-----ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-TSLKYSFQTKDRLCFVMEYVN- 78 (328)
T ss_pred CCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-cceEEEEEcCCEEEEEEeCCC-
Confidence 444567877753 3567899998864320 0122233456666666644333 456777753 47889998
Q ss_pred CCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+..|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 79 -----~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 116 (328)
T cd05593 79 -----GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI 116 (328)
T ss_pred -----CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 554421 11222 2356788999999998654
No 227
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=54.79 E-value=42 Score=28.52 Aligned_cols=100 Identities=13% Similarity=0.135 Sum_probs=57.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-c-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-E-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
+..|-...+|++... ..+..|+++.+-.... + .....-..|..+++.+...++ .++++.|.. ..|.||
T Consensus 10 lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~ 83 (267)
T cd08224 10 IGKGQFSVVYKAICL-----LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV-IKYLASFIENNELNIVLEL 83 (267)
T ss_pred eccCCceEEEEEEEc-----CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe-eeeeeeeecCCeEEEEEec
Confidence 445556778888863 3467788887643220 0 111222357777777644343 455655542 478889
Q ss_pred ecCCCCCccccCCC---------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY---------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~---------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|.. ..+.. -.+..+|++.|+.+|...+
T Consensus 84 ~~------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 127 (267)
T cd08224 84 AD------AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI 127 (267)
T ss_pred CC------CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 98 655531 11222 2356688999999998653
No 228
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=54.75 E-value=35 Score=30.67 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=53.9
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHH-HHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSV-IFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~-i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.|--..+|++... ..+..|.++++...... ........|.. +++.+...+ -.++++.|.. ..|.||+
T Consensus 5 ~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~-iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 5 KGSFGKVLLAKRK-----SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPF-LVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred eCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCC-ccceeeEEEcCCEEEEEEcCC
Confidence 3445567888763 34678889987643200 00111112222 233333333 3457777753 4788999
Q ss_pred cCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 79 ~------~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 117 (321)
T cd05603 79 N------GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI 117 (321)
T ss_pred C------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8 654421 11222 2366789999999998653
No 229
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=54.69 E-value=49 Score=28.23 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=56.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEe-eC-C---eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGV-FP-G---GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~-F~-n---GrIEefi 152 (256)
+..|-...+|++... +..|+++.+-... ...+...|..+++.+..-++- ++++. +. + ..+.||+
T Consensus 14 lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 14 IGKGEFGDVMLGDYR-------GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLV-QLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred ecccCCCeEEEEEEc-------CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCee-eEEEEEEcCCCceEEEEECC
Confidence 334445678887652 5678888875432 222345687888777554444 45654 32 2 4788999
Q ss_pred cCCCCCccccCCCC-------CCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 153 PDKETRKARSLKYS-------ELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 153 ~~~~~~~gr~Lt~~-------el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+ +.+|... .+.. -.+..+|+..|+.+|...
T Consensus 83 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (256)
T cd05082 83 A------KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN 122 (256)
T ss_pred C------CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 8 6555321 0111 246678999999999864
No 230
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=54.53 E-value=46 Score=30.07 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=49.5
Q ss_pred ceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC-----------
Q psy15662 101 SEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY----------- 165 (256)
Q Consensus 101 ~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~----------- 165 (256)
..|.++++-....+.....-..|..+++.+..+..-.++++.|.. ..|.+|++ +.+|..
T Consensus 45 ~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~------~g~L~~~l~~~~~~~~~ 118 (334)
T cd05100 45 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYAS------KGNLREYLRARRPPGMD 118 (334)
T ss_pred eeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCC------CCcHHHHHHhcCCcccc
Confidence 467788776433111222345688888888666555678887753 36788887 433321
Q ss_pred ----------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 166 ----------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 166 ----------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
..+.-. .+..+|+..|+.+|...
T Consensus 119 ~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 154 (334)
T cd05100 119 YSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK 154 (334)
T ss_pred cccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 111111 25678999999999755
No 231
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=54.28 E-value=22 Score=29.21 Aligned_cols=92 Identities=18% Similarity=0.191 Sum_probs=56.4
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCCccc-cccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCc
Q psy15662 85 MLYHVTLLQPIQSSEPSEVLLRIYGQTHGERA-LESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRK 159 (256)
Q Consensus 85 ~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~-~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~ 159 (256)
.+|++... .++..++++++..... .. ..+-..|..+++.+...++. ++++.+.. ..+.+|++
T Consensus 4 ~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~-~~~~~~~~~~~~~l~~e~~~------ 70 (244)
T smart00220 4 KVYLARDK-----KTGKLVAIKVIKKEKI-KKKRERILREISILKKLKHPNIV-RLYDVFEDEDKLYLVMEYCD------ 70 (244)
T ss_pred EEEEEEEC-----CCCcEEEEEEeccccc-ccHHHHHHHHHHHHHhCCCCcHH-HHHhheeeCCEEEEEEeCCC------
Confidence 45666653 3468899999987652 12 33445788888877555544 45665542 47788888
Q ss_pred cccCCCC--C---CC---ChHHHHHHHHHHHhhcCCCC
Q psy15662 160 ARSLKYS--E---LT---DPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 160 gr~Lt~~--e---l~---dp~i~~~IA~~La~lH~~~i 189 (256)
+.+|..- . +. -..+..+|++.++.+|...+
T Consensus 71 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 108 (244)
T smart00220 71 GGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGI 108 (244)
T ss_pred CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence 5444311 0 11 12467788889999998654
No 232
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=54.15 E-value=45 Score=28.36 Aligned_cols=96 Identities=17% Similarity=0.152 Sum_probs=58.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ++.|.++.+-... ........|..+++.+...++ .++++.+.. ..|.||++
T Consensus 14 ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 14 IGKGEFGDVMLGDYR-------GQKVAVKCLKDDS--TAAQAFLAEASVMTTLRHPNL-VQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred eecCCCceEEEEEec-------CcEEEEEEeccch--hHHHHHHHHHHHHHhcCCcce-eeeEEEEcCCCCeEEEEEecC
Confidence 444555677887642 5778999886543 212233457777777765554 456666542 47888888
Q ss_pred CCCCCccccCCCC-------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKYS-------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~~-------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+-+|... .+.. -.+..+|+..|+.+|...+
T Consensus 84 ------~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i 123 (256)
T cd05039 84 ------KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF 123 (256)
T ss_pred ------CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5444310 1111 2366788888899998654
No 233
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=53.94 E-value=49 Score=30.01 Aligned_cols=101 Identities=11% Similarity=0.076 Sum_probs=58.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+.-|--..+|++... .....|.++++..... .........|..++..+...+ -+++++.|.. ..|.|
T Consensus 8 ~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 8 VIGRGAFGEVAVVKMK-----NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW-ITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred EEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-CCceEEEEecCCeEEEEEe
Confidence 3444555677887763 3467899998753210 001111234666666654444 4567777764 48889
Q ss_pred eecCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|.. ..+.. ..+..+|+..|+-+|...+
T Consensus 82 ~~~------g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (331)
T cd05597 82 YYV------GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY 123 (331)
T ss_pred cCC------CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 988 554421 11221 2356788899999998653
No 234
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=53.93 E-value=49 Score=27.67 Aligned_cols=100 Identities=14% Similarity=0.117 Sum_probs=57.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|--..+|++... .++..|+++++...... +....-..|..+++.+..-+ -.++++.|.. ..|.+|+
T Consensus 8 l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 8 IGKGSFGKVYLVRRK-----SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN-IIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred eccCCCeEEEEEEEc-----CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCC-hhheEEEEecCCEEEEEEEec
Confidence 333444577888763 34678889887654310 11122235666666665333 3356666543 3788888
Q ss_pred cCCCCCccccCCC---------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY---------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~---------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 82 ~------~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~ 124 (258)
T cd08215 82 D------GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI 124 (258)
T ss_pred C------CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 8 655421 11111 2477889999999998643
No 235
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=53.75 E-value=54 Score=28.19 Aligned_cols=102 Identities=16% Similarity=0.180 Sum_probs=56.8
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|--..+|++.............|.++++-.............|..+++.+...++ .++++.|.. ..|.||.+
T Consensus 17 g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~~v~e~~~--- 92 (277)
T cd05032 17 GSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV-VRLLGVVSTGQPTLVVMELMA--- 92 (277)
T ss_pred CCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce-eEEEEEEcCCCCcEEEEecCC---
Confidence 4445778877643111133467889987543210112223356666666544443 468887653 47778887
Q ss_pred CCccccCCCC---------------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKYS---------------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~~---------------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|... .+.. -.+..+|+..|+-+|...+
T Consensus 93 ---~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 140 (277)
T cd05032 93 ---KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF 140 (277)
T ss_pred ---CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5444310 0111 1255688889999998654
No 236
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=53.73 E-value=38 Score=32.95 Aligned_cols=96 Identities=14% Similarity=0.046 Sum_probs=55.9
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|-.-..|++... ......|+++...... +.....-..|..+++.+..-+ -+++++.|.. ..|.||++
T Consensus 78 G~~g~vy~a~~~----~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpn-iv~~~~~~~~~~~~~lv~E~~~--- 148 (478)
T PTZ00267 78 NPTTAAFVATRG----SDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFG-IVKHFDDFKSDDKLLLIMEYGS--- 148 (478)
T ss_pred CCCcEEEEEEEc----CCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCC-EeEEEEEEEECCEEEEEEECCC---
Confidence 444456777653 2335678888765443 111111224666666554333 4568888753 48899999
Q ss_pred CCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 157 TRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 157 ~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|.+|.. ..+... .+..+|+..|..+|...
T Consensus 149 ---gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 189 (478)
T PTZ00267 149 ---GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK 189 (478)
T ss_pred ---CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 766631 112222 36678899999999754
No 237
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=53.38 E-value=40 Score=29.82 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=56.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|--..+|++... .....|+++.+..... ........|..+++.+..-++ .++++.|.. ..|.||+
T Consensus 26 ~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 26 KIGQGASGTVYTAIDV-----ATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNI-VNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred EecCCCCeEEEEEEEc-----CCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCe-eehhheeeeCCcEEEEEecC
Confidence 3444555677888642 3456788888754321 111122345555555543333 345665532 4788888
Q ss_pred cCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 99 ~------~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi 136 (293)
T cd06647 99 A------GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV 136 (293)
T ss_pred C------CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 8 655531 11222 3466789999999998653
No 238
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=53.37 E-value=47 Score=29.04 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=59.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi~ 153 (256)
+..|-...+|++.............+.++++-.........+...|..+++.+..-++ .++++.|. ...+.+|.+
T Consensus 8 lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~ 86 (290)
T cd05045 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV-IKLYGACSQDGPLLLIVEYAK 86 (290)
T ss_pred ccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCE-eeEEEEEecCCCcEEEEEecC
Confidence 3345566788887542111223356788877654311122334567777777755444 34666654 247778877
Q ss_pred CCCCCccccCCCC-----------------------------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKYS-----------------------------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~~-----------------------------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|..- .+.. -.+..+|+..|+-+|...+
T Consensus 87 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i 148 (290)
T cd05045 87 ------YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL 148 (290)
T ss_pred ------CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5544210 0111 2567789999999998654
No 239
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=53.13 E-value=60 Score=27.88 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=58.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCC--C--CccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQT--H--GERALESIITDSVIFTLLSERKLGPTLHGVFPG------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~--t--~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------Gr 147 (256)
+.-|-...+|++... ..+..|.+|+.-.. . .......-..|..+++.+..-++- ++++.+.. ..
T Consensus 10 lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~-~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 10 LGRGAFGEVYLCYDA-----DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIV-QYYGCLRDPEEKKLSI 83 (264)
T ss_pred EccCCCeEEEEEEEc-----CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcc-eEEEEEEcCCCCEEEE
Confidence 334555678888753 34678888875321 1 001222334577788888665654 56666532 25
Q ss_pred EEEeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.||++ +.+|.. ..+.. -.+..+|+..|..+|...+
T Consensus 84 v~e~~~------~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i 127 (264)
T cd06653 84 FVEYMP------GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMI 127 (264)
T ss_pred EEEeCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 778988 655421 11211 2356789999999997653
No 240
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=52.97 E-value=58 Score=30.00 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=60.5
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|-...+|++... ..+..|.++++-.... .........|..+++.|...++ .++++.|.. ..|.
T Consensus 7 ~~lG~G~~g~V~~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-v~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 7 KTIGIGAFGEVCLVRKV-----DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV-VKLYYSFQDKDNLYFVM 80 (376)
T ss_pred EEEEeCCCeEEEEEEEC-----CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEEcCCEEEEEE
Confidence 44555666778888763 3467899998754210 0111223357777777755444 457777753 2678
Q ss_pred EeecCCCCCccccCCC----CC-CCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY----SE-LTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~----~e-l~dp---~i~~~IA~~La~lH~~~i 189 (256)
||++ |..|.. .. +... .+..+|+..|+-+|...+
T Consensus 81 E~~~------~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 122 (376)
T cd05598 81 DYIP------GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGF 122 (376)
T ss_pred eCCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8888 544421 11 1111 245688899999998654
No 241
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=52.85 E-value=46 Score=30.13 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=58.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-.-.+|++... ..+..|.+++..............+|..+++.+..-++ .++++.|.. ..|.||+
T Consensus 12 ~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 85 (331)
T cd06649 12 ELGAGNGGVVTKVQHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-VGFYGAFYSDGEISICMEHM 85 (331)
T ss_pred eecCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCC-CeEEEEEEECCEEEEEeecC
Confidence 3444555678888763 34567888877643211112223467777777754444 457777642 4788898
Q ss_pred cCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCC
Q psy15662 153 PDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLM 187 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~ 187 (256)
+ |.+|.. ..+.. ..++.+|+..|+.+|..
T Consensus 86 ~------~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 86 D------GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred C------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 8 655531 11111 24667889999999963
No 242
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=52.72 E-value=11 Score=31.34 Aligned_cols=20 Identities=35% Similarity=0.652 Sum_probs=17.3
Q ss_pred EEEEeccceeeeeEEEEecC
Q psy15662 23 CVKRMSGGLTNMLYHVTLLQ 42 (256)
Q Consensus 23 ~v~~isggltN~l~~v~~~~ 42 (256)
+|++++||.+|.+|.|+..+
T Consensus 1 ~i~~l~~G~~n~~~~v~~~~ 20 (239)
T PF01636_consen 1 HIRPLSGGFSNRVYRVTTDD 20 (239)
T ss_dssp -EEEEEESSSSEEEEEEETT
T ss_pred CCccCCCCCeeeEEEEEECC
Confidence 58999999999999998755
No 243
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=52.61 E-value=1.1e+02 Score=26.83 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=59.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+.-|-...+|++... .....|.+|+.-..... .....-..|..+++.+...++.+ +++.|.. ..|.+
T Consensus 7 ~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~lv~e 80 (285)
T cd05605 7 VLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLVLT 80 (285)
T ss_pred EEecCCCeEEEEEEEc-----CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee-eeeeecCCCeEEEEEe
Confidence 3444555678888753 34678889987543200 01111235777787776544444 6666653 37888
Q ss_pred eecCCCCCccccCC-------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLK-------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt-------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ +..|. ...+..+ .+..+|++.|+.+|+..+
T Consensus 81 ~~~------~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 81 LMN------GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred ccC------CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 888 55442 1123222 255788899999997653
No 244
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=52.52 E-value=41 Score=30.15 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=60.4
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|-...+|++... ..+..|+++++..... .....+-..|..+++.+...+ -+++++.|.. ..|.
T Consensus 27 ~~lg~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~ 100 (313)
T cd06633 27 HEIGHGSFGAVYFATNS-----HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN-TIEYKGCYLKEHTAWLVM 100 (313)
T ss_pred eeeccCCCeEEEEEEEC-----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCC-CccEEEEEEeCCEEEEEE
Confidence 34556666788998753 3467888888764331 011223345777777775333 4557776543 4788
Q ss_pred EeecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
||++ |..+. ...+... .+..+|+..|+.+|...+
T Consensus 101 e~~~------~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi 142 (313)
T cd06633 101 EYCL------GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM 142 (313)
T ss_pred ecCC------CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8887 43211 1122222 256788999999998653
No 245
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=52.25 E-value=66 Score=30.66 Aligned_cols=83 Identities=17% Similarity=0.087 Sum_probs=47.7
Q ss_pred ccceEEee-cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----
Q psy15662 71 TDSVIFTL-LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---- 145 (256)
Q Consensus 71 ~~~~i~~l-~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---- 145 (256)
+.+++..+ ..|-.-.+|+++...-........|.++++..............|..+++.+..+---++++|.|..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 44444433 3344567788775321111223468888886543111122334688888888655556678888864
Q ss_pred eEEEEeec
Q psy15662 146 GRIEEYIP 153 (256)
Q Consensus 146 GrIEefi~ 153 (256)
..|.||++
T Consensus 117 ~lv~Ey~~ 124 (400)
T cd05105 117 YIITEYCF 124 (400)
T ss_pred EEEEEecC
Confidence 47888887
No 246
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=52.24 E-value=1.3e+02 Score=25.77 Aligned_cols=100 Identities=11% Similarity=0.063 Sum_probs=53.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC-C---eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP-G---GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n---GrIEefi 152 (256)
.+..|-...+|++... ..+..|.++.+-.....+.-.+...|..+......+..-.++++.|. + ..+.||+
T Consensus 8 ~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~ 82 (283)
T cd06617 8 ELGRGAYGVVDKMRHV-----PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVM 82 (283)
T ss_pred EecccCCeEEEEEEEc-----CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhh
Confidence 4455666788998763 45788888887543210111112234443333334444456777663 2 3666777
Q ss_pred cCCCCCccc-------cCCCC-CCCC---hHHHHHHHHHHHhhcCC
Q psy15662 153 PDKETRKAR-------SLKYS-ELTD---PAISRKIAEKMADIHLM 187 (256)
Q Consensus 153 ~~~~~~~gr-------~Lt~~-el~d---p~i~~~IA~~La~lH~~ 187 (256)
+ |. .+... .+.. ..+..+||..|+.+|..
T Consensus 83 ~------~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 122 (283)
T cd06617 83 D------TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK 122 (283)
T ss_pred c------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 6 31 11111 1222 14677889999999974
No 247
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=51.87 E-value=64 Score=28.60 Aligned_cols=101 Identities=18% Similarity=0.172 Sum_probs=59.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+.-|-...+|++... .....|.++.+.....+........|..+++.+...++- ++++.|.. ..|.||+
T Consensus 13 ~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~ 86 (309)
T cd07872 13 KLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV-TLHDIVHTDKSLTLVFEYL 86 (309)
T ss_pred EecccCCEEEEEEEec-----CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcc-eEEEEEeeCCeEEEEEeCC
Confidence 4445666778888753 345678888765433111222344688888877655554 57777753 4788888
Q ss_pred cCCCCCccccCCC----CC-CCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SE-LTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~e-l~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +..+.. .. +... .+..+|+..|+.+|+..+
T Consensus 87 ~------~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 125 (309)
T cd07872 87 D------KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV 125 (309)
T ss_pred C------CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 7 422110 11 2212 256688999999998643
No 248
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=51.68 E-value=85 Score=27.38 Aligned_cols=107 Identities=15% Similarity=0.111 Sum_probs=61.8
Q ss_pred ccceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC---
Q psy15662 71 TDSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG--- 145 (256)
Q Consensus 71 ~~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n--- 145 (256)
+++++. .+..|-...+|++... ..+..+++++.-.... +....+..+|..+++.+...++- ++++.|..
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~ 81 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQI-----KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVV-PLIDMAVERPD 81 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCcc-chhhheecccc
Confidence 334433 3445556688998863 3467788887643221 11223456788888888665554 45555421
Q ss_pred ---------eEEEEeecCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 ---------GRIEEYIPDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ---------GrIEefi~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.+|++ +..+. ...+.. ..+..+|++.|+.+|...+
T Consensus 82 ~~~~~~~~~~lv~~~~~------~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i 136 (311)
T cd07866 82 KSKRKRGSVYMVTPYMD------HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHI 136 (311)
T ss_pred cccccCceEEEEEecCC------cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35777776 32111 112222 2367789999999998653
No 249
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=51.66 E-value=26 Score=29.97 Aligned_cols=97 Identities=14% Similarity=0.129 Sum_probs=56.5
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeC-C---eEEEEeec
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFP-G---GRIEEYIP 153 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n---GrIEefi~ 153 (256)
.|-...+|++... .++..+.++....... .....+...|..+++.+...++- ++++.|. + ..+.+|++
T Consensus 12 ~g~~g~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~~~~v~e~~~ 85 (267)
T cd08229 12 RGQFSEVYRATCL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI-KYYASFIEDNELNIVLELAD 85 (267)
T ss_pred ccCCeEEEEEeec-----CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchh-hhhheeEeCCeEEEEEEecC
Confidence 3444568888753 3467888887654210 01122334577777776544444 4566653 2 47888888
Q ss_pred CCCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|.+|.. ..+... .+..+|++.|+.+|...
T Consensus 86 ------~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 126 (267)
T cd08229 86 ------AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR 126 (267)
T ss_pred ------CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 665531 112222 35678999999999864
No 250
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=51.49 E-value=61 Score=29.38 Aligned_cols=107 Identities=10% Similarity=0.036 Sum_probs=62.3
Q ss_pred ccceEEe-ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC--
Q psy15662 71 TDSVIFT-LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG-- 145 (256)
Q Consensus 71 ~~~~i~~-l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n-- 145 (256)
+++.+.. +..|-.-.+|++... ..+..|.++++..... ......-..|..+++.+...+ -.++++.|..
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-iv~~~~~~~~~~ 91 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHK-----GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPF-IVNMMCSFQDEN 91 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCC-CCcEEEEEEcCC
Confidence 4444444 344555678888863 4567899998754320 011112346777777775444 4567777753
Q ss_pred --eEEEEeecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 146 --GRIEEYIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 --GrIEefi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ |.+|.. ..+... .+..+|+..|+-+|+..+
T Consensus 92 ~~~lv~e~~~------~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 139 (329)
T PTZ00263 92 RVYFLLEFVV------GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDI 139 (329)
T ss_pred EEEEEEcCCC------CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36778888 544421 112111 255788999999998653
No 251
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=51.46 E-value=49 Score=30.37 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=58.6
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCC--CccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH--GERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t--~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..+..|---.+|++... ..+..|.+++.-... .......-..|..++..+.. ..-+++++.|.. ..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 7 KVIGRGAFGEVRLVQKK-----DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-AWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred EEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEEE
Confidence 34444555678888763 356788899875321 00111122346666665533 334567777764 4788
Q ss_pred EeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
||++ |.+|.. ..+.. ..+..+|+..|+.+|+..+
T Consensus 81 E~~~------gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~gi 122 (360)
T cd05627 81 EFLP------GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGF 122 (360)
T ss_pred eCCC------CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 9998 544321 11222 2356788888999998654
No 252
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=51.34 E-value=92 Score=27.54 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=60.7
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEe 150 (256)
+..|-...+|++... ..+..|.++++-.... +........|..+++.+...++. ++++.|.+ ..|.+
T Consensus 15 ig~g~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~lv~e 88 (309)
T cd07845 15 IGEGTYGIVYRARDT-----TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIV-ELKEVVVGKHLDSIFLVME 88 (309)
T ss_pred eeecCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCc-ceEEEEecCCCCeEEEEEe
Confidence 445666788888763 3567888888753321 11223345688888888665554 57777632 36777
Q ss_pred eecCCCCCcccc---CC--CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARS---LK--YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~---Lt--~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+ +.- +. ...+.. ..+..+|++.|+.+|...+
T Consensus 89 ~~~------~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 129 (309)
T cd07845 89 YCE------QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI 129 (309)
T ss_pred cCC------CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 776 410 11 011222 3477889999999998654
No 253
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=50.84 E-value=89 Score=27.11 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=57.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++....+. ......|.++............+-..|..+++.+...++ +++++.|.. ..+.||++
T Consensus 13 lg~g~~g~vy~~~~~~~~-~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~ 90 (283)
T cd05090 13 LGECAFGKIYKGHLYLPG-MDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-VCLLGVVTQEQPVCMLFEYLN 90 (283)
T ss_pred ccccCCcceEEEEEecCC-CCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCe-eeEEEEEecCCceEEEEEcCC
Confidence 333444568887653221 233466777776543311122223457777777754444 457777653 47888888
Q ss_pred CCCCCccccCCC----------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY----------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~----------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+||+.|+.+|...+
T Consensus 91 ------~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 145 (283)
T cd05090 91 ------QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF 145 (283)
T ss_pred ------CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 433311 00111 2367789999999998653
No 254
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=50.38 E-value=47 Score=29.92 Aligned_cols=97 Identities=11% Similarity=0.145 Sum_probs=52.8
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHH-HHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVI-FTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i-~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
|-.-.+|++... ..+..|.++++...... ........|..+ ++.+ .+..-.++++.|.+ ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 6 GSFGKVLLAKHK-----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 444567888763 45678999998643200 000011122222 2222 23334567777653 47888988
Q ss_pred CCCCCccccCC----C-CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK----Y-SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt----~-~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.+|. . ..+.. ..+..+|+..|+-+|...+
T Consensus 80 ------~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi 117 (323)
T cd05575 80 ------GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNI 117 (323)
T ss_pred ------CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55552 1 11222 2356789999999998653
No 255
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=50.32 E-value=89 Score=28.31 Aligned_cols=100 Identities=10% Similarity=0.066 Sum_probs=58.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeC--C---eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFP--G---GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n---GrIEe 150 (256)
.+..|-...+|++... ..+..|.++.+-.... .....+-..|..+++.+..-++- ++++.|. + ..|.+
T Consensus 17 ~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv-~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 17 PVGMGAFGLVCSARDQ-----LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENII-SLSDIFISPLEDIYFVTE 90 (328)
T ss_pred eecccCCeEEEEEEEC-----CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCee-eEeeeEecCCCcEEEEee
Confidence 4455666678888753 3567888887543210 01222334687888777655554 4667662 2 37788
Q ss_pred eecCCCCCccccC----CCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSL----KYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~L----t~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.. + .| ....+.. ..+..+|++.|+.+|...+
T Consensus 91 ~~~------~-~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i 129 (328)
T cd07856 91 LLG------T-DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGV 129 (328)
T ss_pred hhc------c-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 876 3 22 1112222 2466788899999998764
No 256
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=50.27 E-value=47 Score=29.92 Aligned_cols=95 Identities=12% Similarity=0.158 Sum_probs=52.6
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHH--hcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLS--ERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls--~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
..+|++... ..+..|.++++-.... +........|..++..+. .+..-++++..|.. ..|.||++
T Consensus 7 g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~-- 79 (330)
T cd05586 7 GQVYQVRKK-----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS-- 79 (330)
T ss_pred eEEEEEEEC-----CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC--
Confidence 456777653 4567899998753210 001111223444444332 44455566676653 48888988
Q ss_pred CCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+..|. ...+.. ..+..+|++.|+-+|...+
T Consensus 80 ----~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i 117 (330)
T cd05586 80 ----GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI 117 (330)
T ss_pred ----CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 54441 111222 2356789999999998653
No 257
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=50.15 E-value=63 Score=27.69 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=56.6
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCC-c---cccccHHHHHHHHHHHHhcCCCCceeEeeCC---e---EEE
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-E---RALESIITDSVIFTLLSERKLGPTLHGVFPG---G---RIE 149 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e---~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---G---rIE 149 (256)
.|-...+|++... ..+..|.++..-.... . ..+.....|..+++.+...++- ++++.|.. . .+.
T Consensus 12 ~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~~v~ 85 (265)
T cd06652 12 QGAFGRVYLCYDA-----DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIV-QYYGCLRDPMERTLSIFM 85 (265)
T ss_pred cCCceEEEEEEEc-----CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCee-eEEeEeccCCCceEEEEE
Confidence 3444567877653 3467788886532110 0 1112234577777777554543 57777753 1 577
Q ss_pred EeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+|++ +.+|.. ..+.. ..+..++|..|+.+|+..+
T Consensus 86 e~~~------~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 127 (265)
T cd06652 86 EHMP------GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMI 127 (265)
T ss_pred EecC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 8888 655531 11111 2467789999999998654
No 258
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=49.86 E-value=40 Score=30.16 Aligned_cols=95 Identities=8% Similarity=0.094 Sum_probs=55.1
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
...+|++... .....|.++++-.... .........|..+++.+...++- ++++.|.. ..|.||++
T Consensus 6 ~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~--- 76 (312)
T cd05585 6 FGKVMQVRKR-----DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIV-PLKFSFQSPEKLYLVLAFIN--- 76 (312)
T ss_pred CeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEe-ceeeEEecCCeEEEEEcCCC---
Confidence 3567887763 3467788888753210 01122223577777776544444 46666643 47888888
Q ss_pred CCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|++.|+.+|+..+
T Consensus 77 ---~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 114 (312)
T cd05585 77 ---GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNV 114 (312)
T ss_pred ---CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 554421 11211 2366788999999998653
No 259
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=49.79 E-value=54 Score=30.17 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=58.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+.-|-...+|++... ..+..|.+++.-.... .........|..++..+.. -.-+++++.|.. ..|.|
T Consensus 8 ~LG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~-~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 8 VIGRGAFGEVRLVQKK-----DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS-LWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred EEEeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCeEEEEEc
Confidence 3444666788888763 4567899998754210 0111122346666665543 334567777764 37889
Q ss_pred eecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |..|.. .-+.. ..+..+|+..|+-+|+..+
T Consensus 82 ~~~------gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi 122 (363)
T cd05628 82 FLP------GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF 122 (363)
T ss_pred CCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 998 543321 11222 2356788888999998654
No 260
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=49.70 E-value=52 Score=28.38 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhcCCCCceeEeeCCeEEEEeec
Q psy15662 121 ITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIP 153 (256)
Q Consensus 121 ~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~ 153 (256)
..|..++++|.....-|++||....-.+.||++
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~~~v~E~~~ 39 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGRFYVVEYVG 39 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCCEEEEEeec
Confidence 358899999999889999999999999999999
No 261
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=49.56 E-value=41 Score=30.67 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=41.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--C---eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--G---GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n---GrIEefi 152 (256)
+..|-.-.+|++...........+.|.+++.-.............|..++..+..+..-.++++.+. + ..+.||+
T Consensus 15 lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~ 94 (343)
T cd05103 15 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFC 94 (343)
T ss_pred ccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEecc
Confidence 3445666788886432111234567888887543311122233468788777765433356666542 2 3567777
Q ss_pred c
Q psy15662 153 P 153 (256)
Q Consensus 153 ~ 153 (256)
+
T Consensus 95 ~ 95 (343)
T cd05103 95 K 95 (343)
T ss_pred C
Confidence 7
No 262
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=49.52 E-value=62 Score=29.45 Aligned_cols=97 Identities=11% Similarity=0.103 Sum_probs=57.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ..+..+.+++......+.....-..|..+++.+...++- ++++.|.. ..|.||++
T Consensus 13 lg~g~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~lv~e~~~ 86 (333)
T cd06650 13 LGAGNGGVVFKVSHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV-GFYGAFYSDGEISICMEHMD 86 (333)
T ss_pred ccCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCccc-ceeEEEEECCEEEEEEecCC
Confidence 344555678888753 345667777765432111122334688888877655544 57777653 37888888
Q ss_pred CCCCCccccCCC----C-CCCC---hHHHHHHHHHHHhhcC
Q psy15662 154 DKETRKARSLKY----S-ELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 154 ~~~~~~gr~Lt~----~-el~d---p~i~~~IA~~La~lH~ 186 (256)
|.+|.. . .+.. ..+..+|+..|+.+|.
T Consensus 87 ------~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~ 121 (333)
T cd06650 87 ------GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 121 (333)
T ss_pred ------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 655531 1 1111 2456688888899996
No 263
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=49.34 E-value=25 Score=30.80 Aligned_cols=101 Identities=14% Similarity=0.123 Sum_probs=58.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc---cccc-cHHHHHHHHHHHHhcCCCCceeEeeCC----eEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE---RALE-SIITDSVIFTLLSERKLGPTLHGVFPG----GRI 148 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e---~~~i-dR~~E~~i~~~Ls~~glgPkl~g~F~n----GrI 148 (256)
.+..|....+|++... ..+..|.+|.+-..... .... .-..|..+++.+...++-+ +++.|.+ ..|
T Consensus 7 ~lg~g~~~~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~-~~~~~~~~~~~~lv 80 (298)
T cd07841 7 KLGEGTYAVVYKARDK-----ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIG-LLDVFGHKSNINLV 80 (298)
T ss_pred eeeeccccEEEEEEEC-----CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChh-hhheeecCCEEEEE
Confidence 4555667788998863 34678999998655410 0011 1134777777776555544 5666543 467
Q ss_pred EEeecCCCCCccc---cCCCC--CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKAR---SLKYS--ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr---~Lt~~--el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.||+. +. -+... .+.. -.+..+|++.|+.+|...+
T Consensus 81 ~e~~~------~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 123 (298)
T cd07841 81 FEFME------TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI 123 (298)
T ss_pred EcccC------CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 77774 31 11111 1222 2467789999999998654
No 264
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=49.26 E-value=55 Score=28.53 Aligned_cols=103 Identities=13% Similarity=0.140 Sum_probs=56.8
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
..|--..+|++......+..+...|.+++.......+....-..|..+++.+...++ .++++.+.. ..|.||++
T Consensus 14 g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~- 91 (288)
T cd05050 14 GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI-VKLLGVCAVGKPMCLLFEYMA- 91 (288)
T ss_pred cccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCch-heEEEEEcCCCccEEEEecCC-
Confidence 335556788887532111234567888887544311111222346666666644333 456777654 47888887
Q ss_pred CCCCccccCC----------C-----------------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 155 KETRKARSLK----------Y-----------------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 155 ~~~~~gr~Lt----------~-----------------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|. . ..+.. -.+..+|+..|+.+|...
T Consensus 92 -----~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~ 150 (288)
T cd05050 92 -----YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK 150 (288)
T ss_pred -----CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 43321 0 01111 247788999999999854
No 265
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=49.08 E-value=61 Score=29.46 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=57.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC-C----------
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP-G---------- 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n---------- 145 (256)
.+..|-...+|++... ..+..|++|....... ........|..+++.+..-++ .++++.+. +
T Consensus 12 ~Lg~g~~g~vy~~~~~-----~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i-~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 12 PLGCGSNGLVFSAVDS-----DCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNI-VKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred EecCCCCEEEEEEEEC-----CCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcc-hhhHhhhccccccccccccc
Confidence 3444555678888753 4567888988755431 223334567888877754444 33454332 1
Q ss_pred -------eEEEEeecCCCCCccc---cCCCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 -------GRIEEYIPDKETRKAR---SLKYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 -------GrIEefi~~~~~~~gr---~Lt~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.+|++ +. -+....+.. ..+..+|+..|.-+|...+
T Consensus 85 ~~~~~~~~lv~e~~~------~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi 135 (342)
T cd07854 85 LTELNSVYIVQEYME------TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANV 135 (342)
T ss_pred ccccceEEEEeeccc------ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 37888887 41 111111222 2356788999999998654
No 266
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=48.93 E-value=33 Score=28.89 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=53.4
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCC
Q psy15662 85 MLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETR 158 (256)
Q Consensus 85 ~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~ 158 (256)
.+|++... .....++++++...... ........|..+++.+...++- ++++.|.+ ..|.+|++
T Consensus 8 ~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e~~~----- 76 (250)
T cd05123 8 KVLLVRKK-----DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIV-KLHYAFQTEEKLYLVLEYAP----- 76 (250)
T ss_pred EEEEEEEC-----CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHH-HHHHHeecCCeeEEEEecCC-----
Confidence 67777753 34678899988754310 0111234566777777644433 45566553 46777886
Q ss_pred ccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|..+|...+
T Consensus 77 -~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~ 114 (250)
T cd05123 77 -GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGI 114 (250)
T ss_pred -CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 444421 01222 2356678899999998554
No 267
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=48.40 E-value=39 Score=30.46 Aligned_cols=101 Identities=10% Similarity=0.125 Sum_probs=58.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|-.-.+|++... ..+..|.++++-.... .........|..++..+...++ +++++.|.. ..|.|
T Consensus 8 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 8 VIGRGAFGEVWLVRDK-----DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-VKLYYSFQDEEHLYLVME 81 (350)
T ss_pred EEEeCCcEEEEEEEEC-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-cchhhheecCCeEEEEEc
Confidence 3444556678888863 3567899998754310 0011122346666666653333 456666653 47888
Q ss_pred eecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 82 ~~~------~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 122 (350)
T cd05573 82 YMP------GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGF 122 (350)
T ss_pred CCC------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 888 544421 11221 2366789999999998543
No 268
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=48.26 E-value=78 Score=28.51 Aligned_cols=94 Identities=12% Similarity=0.119 Sum_probs=53.9
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeC--C----eEEEEeecCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFP--G----GRIEEYIPDKE 156 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n----GrIEefi~~~~ 156 (256)
..+|++... ..+..++++..-.... .........|..+++.++.+.--.++++.|. + ..|.||++
T Consensus 21 ~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~--- 92 (337)
T cd07852 21 GIVWKAIDR-----RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME--- 92 (337)
T ss_pred eeEEEEEEc-----CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc---
Confidence 456777653 2356677775532110 0122233468888888844444456778763 2 47888887
Q ss_pred CCccccCCC-------CCCCChHHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKY-------SELTDPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~-------~el~dp~i~~~IA~~La~lH~~~i 189 (256)
+ .|.. .+.....+..+||..|+.+|...+
T Consensus 93 ---~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 128 (337)
T cd07852 93 ---T-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNV 128 (337)
T ss_pred ---c-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4 2211 111222477889999999998654
No 269
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=48.26 E-value=62 Score=29.94 Aligned_cols=103 Identities=12% Similarity=0.087 Sum_probs=60.0
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEE
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRI 148 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrI 148 (256)
+..+.-|---.+|++... .....|.+++...... .........|..+++.+...+ -.++++.|.+ ..|
T Consensus 6 ~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~-iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 6 IKTLGIGAFGEVCLARKV-----DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW-VVRLYYSFQDKDNLYFV 79 (382)
T ss_pred EEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCc-CCeEEEEEEeCCEEEEE
Confidence 344545556678888753 3467788888754310 011223345777777665443 4567887764 478
Q ss_pred EEeecCCCCCccccCCC----CC-CCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARSLKY----SE-LTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~Lt~----~e-l~d---p~i~~~IA~~La~lH~~~i 189 (256)
.||++ |..|.. .. +.. ..+..+|+..|+-+|+..+
T Consensus 80 ~E~~~------gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~i 122 (382)
T cd05625 80 MDYIP------GGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGF 122 (382)
T ss_pred EeCCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 89988 543321 11 111 1345678888999998754
No 270
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=48.15 E-value=64 Score=27.72 Aligned_cols=100 Identities=10% Similarity=0.113 Sum_probs=55.9
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|--..+|++.... ......++++.......+.......+|..+++.+...++ .++++.|.. ..|.||++
T Consensus 5 ~G~fg~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-i~~~~~~~~~~~~~lv~e~~~-- 78 (269)
T cd05042 5 NGWFGKVLLGEAHR---GMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNV-LQCLGQCIESIPYLLVLEFCP-- 78 (269)
T ss_pred ccCCceEEEEEEec---CCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCc-ceEEEEECCCCceEEEEEeCC--
Confidence 34455677765432 123456777765543311111222357777776654444 457777653 47888888
Q ss_pred CCCccccCCC---------CCCCC----hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY---------SELTD----PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~---------~el~d----p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ....+ -.+..+|+..|+-+|...+
T Consensus 79 ----~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (269)
T cd05042 79 ----LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF 121 (269)
T ss_pred ----CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE
Confidence 554421 01111 2356788999999998764
No 271
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=48.06 E-value=1.2e+02 Score=26.05 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=58.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecC
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPD 154 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~ 154 (256)
+..|-...+|++...+. ......|.++++-.............|..+++.+...++ .++++.+.. ..|.||.+
T Consensus 14 lg~g~~g~v~~~~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~lv~e~~~- 89 (270)
T cd05056 14 IGEGQFGDVYQGVYMSP--ENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-VKLIGVITENPVWIVMELAP- 89 (270)
T ss_pred eCCccceeEEEEEEecC--CCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-hceeEEEcCCCcEEEEEcCC-
Confidence 34455667888775421 123346788877654311122234457777777754444 457777654 46778887
Q ss_pred CCCCccccCC------CCCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 155 KETRKARSLK------YSELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 155 ~~~~~gr~Lt------~~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
+.+|. ...+... .+..+|+..|+-+|...
T Consensus 90 -----~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 127 (270)
T cd05056 90 -----LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR 127 (270)
T ss_pred -----CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44442 1122332 25578899999999865
No 272
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=47.85 E-value=29 Score=29.99 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=55.5
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|--..+|++... .....|+++.+...........+..|...+..+.++.--+++++.|.. ..|.||++
T Consensus 9 ~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-- 81 (283)
T cd07830 9 DGTFGSVYLARNK-----ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYME-- 81 (283)
T ss_pred cCCceEEEEEEEC-----CCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCC--
Confidence 3445568888763 345678888876543100111223466666655534444566666542 47777776
Q ss_pred CCCccccCC---C---CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLK---Y---SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt---~---~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|..+. . ..+.. ..+..+|+..|..+|...+
T Consensus 82 ----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 120 (283)
T cd07830 82 ----GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF 120 (283)
T ss_pred ----CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 43211 1 11222 3466788999999998654
No 273
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=47.85 E-value=52 Score=27.87 Aligned_cols=100 Identities=10% Similarity=0.090 Sum_probs=56.1
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeC--C---eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFP--G---GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n---GrIEef 151 (256)
+..|-...+|.+... .....|+++....... ......-..|..+++.+...++- ++++.|. + -.+.||
T Consensus 8 lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 8 VGKGSYGEVSLVRHR-----TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIV-AYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ecCCCCeEEEEEEEc-----CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCee-eeeeeecCCCCEEEEEecc
Confidence 444556678888763 3356788888754320 01111223465666666544443 3555554 2 268888
Q ss_pred ecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ +.+|.. ..+.. -.+..+|+..++.+|...+
T Consensus 82 ~~------~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i 123 (257)
T cd08223 82 CE------GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI 123 (257)
T ss_pred cC------CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 88 554421 11111 2466788888999998653
No 274
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=47.82 E-value=64 Score=27.89 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=58.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
.+..|-...+|++... ..+..|.++.+-..... ....+...|..+++.+...++ .++++.|.+ ..|.+|
T Consensus 7 ~l~~g~~~~vy~~~~~-----~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 7 KIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-VRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred EecccCCeEEEEEEEC-----CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCe-eeHHHHhccCCceEEEEec
Confidence 3444556678988863 34567888876432210 122334568888887754443 345666653 377788
Q ss_pred ecCCCCCccccCC-----CCCCC---ChHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLK-----YSELT---DPAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt-----~~el~---dp~i~~~IA~~La~lH~~~i 189 (256)
++ +.-+. ...+. -..+..+|++.|+.+|...+
T Consensus 81 ~~------~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 81 CD------QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred CC------CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 77 42111 01111 13567789999999998654
No 275
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=47.82 E-value=49 Score=28.31 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=55.3
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
.-|....+|++... .....|.++++-.... ........|..+++.+..-++ .++++.|.. ..+.||++
T Consensus 18 g~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~i-i~~~~~~~~~~~~~lv~e~~~- 89 (267)
T cd06645 18 GSGTYGDVYKARNV-----NTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNI-VAYFGSYLRRDKLWICMEFCG- 89 (267)
T ss_pred CCCCCeEEEEEEEc-----CCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCe-eeEEEEEEeCCEEEEEEeccC-
Confidence 34556678888753 3467888888754431 222233456666666643333 345555432 36777777
Q ss_pred CCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 155 KETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 155 ~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
+..|.. ..+... .+..+|+..|+.+|...
T Consensus 90 -----~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 90 -----GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred -----CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 544421 122222 35667888888999754
No 276
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=47.67 E-value=1.4e+02 Score=25.67 Aligned_cols=102 Identities=17% Similarity=0.178 Sum_probs=57.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|---.+|+.....+ ......|.+++.-.........+...|..+++.+. +.--.+++|.|.. ..|.||++
T Consensus 13 ig~G~fg~V~~~~~~~~--~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 13 LGTGRFGELCRGCLKLP--SKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred ecccCCCeEEEEEEecC--CCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCcEEEEEeCC
Confidence 33444566777765321 23445677887665431111112335666666553 3344678888764 38899998
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+||..|+.+|...
T Consensus 90 ------~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 90 ------NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred ------CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 544431 12222 246678889999999854
No 277
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=47.61 E-value=62 Score=28.27 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=55.5
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKET 157 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~ 157 (256)
..+|++... ..+..|.++.+...... ........|..+++.+...++- ++++.|.. ..|.||++
T Consensus 7 g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~-~~~~~~~~~~~~~lv~e~~~---- 76 (277)
T cd05607 7 GEVCAVQVK-----NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIV-NLAYAFESKTHLCLVMSLMN---- 76 (277)
T ss_pred eEEEEEEEc-----cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEE-EEEEEEecCCeEEEEEecCC----
Confidence 467877763 34677888877532200 0011123477788877554444 46666653 48889998
Q ss_pred CccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+..+ .+..+|+..|+-+|...+
T Consensus 77 --g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 116 (277)
T cd05607 77 --GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI 116 (277)
T ss_pred --CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 665531 112222 355689999999998553
No 278
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=47.58 E-value=70 Score=27.84 Aligned_cols=83 Identities=22% Similarity=0.308 Sum_probs=49.4
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC----------
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY---------- 165 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~---------- 165 (256)
...|.++++..........+...|..+++.+...++- ++++.|.. ..+.+|++ +.+|..
T Consensus 46 ~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~~~~ 118 (296)
T cd05051 46 PVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA-RLLGVCTVDPPLCMIMEYME------NGDLNQFLQKHVAETS 118 (296)
T ss_pred ceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe-EEEEEEecCCCcEEEEecCC------CCCHHHHHHhcccccc
Confidence 4568889887654111222334577888887655543 46666653 46777777 443321
Q ss_pred ------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 166 ------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 166 ------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..+.. -.+..+|+..|+-+|...+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i 151 (296)
T cd05051 119 GLACNSKSLSFSTLLYMATQIASGMRYLESLNF 151 (296)
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 01222 2356788999999998654
No 279
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=47.53 E-value=40 Score=29.98 Aligned_cols=100 Identities=10% Similarity=0.180 Sum_probs=57.8
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+..|-...+|++... .....|++++...... ........|..++..+..-++ +++++.|.. ..|.||+
T Consensus 28 ~ig~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 28 KIGEGSTGIVCIAREK-----HSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNV-VEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hcCCCCceeEEEEEEc-----CCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCch-hhhhhheeeCCeEEEEEecC
Confidence 3455666778888753 3467888988754331 111222346555555543333 356666542 3788888
Q ss_pred cCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 101 ~------~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 101 Q------GGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred C------CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 8 554431 12222 2366788999999998653
No 280
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=47.20 E-value=1.1e+02 Score=26.12 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=58.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|--..+|++....+ ......|.+++.-....+....+...|..+++.+...++ .++++.+.. ..+.||++
T Consensus 12 lg~g~~g~vy~~~~~~~--~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~iv~e~~~ 88 (266)
T cd05033 12 IGGGEFGEVCRGRLKLP--GKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-IRLEGVVTKSRPVMIITEYME 88 (266)
T ss_pred ecCCccceEEEEEEccC--CCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-ceEeEEEecCCceEEEEEcCC
Confidence 34455668898876431 122456778876443311111223356677766654443 457777653 47888888
Q ss_pred CCCCCccccCCC------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+..+ .+..++|..|+.+|...+
T Consensus 89 ------~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i 127 (266)
T cd05033 89 ------NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY 127 (266)
T ss_pred ------CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 554421 122222 355688888999998653
No 281
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=47.05 E-value=1.4e+02 Score=25.59 Aligned_cols=97 Identities=19% Similarity=0.210 Sum_probs=57.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|.+... ....+.+|..-... ....+-.+|..+++.+...++ +++++.+.. ..|.||++
T Consensus 12 lg~G~~~~vy~~~~~------~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 12 LGTGQFGVVKYGKWR------GQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKL-VQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred ecCcccceEEEEEec------CCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCe-eeEEEEEccCCCcEEEEEcCC
Confidence 444555677877653 13458888765432 112223467777777764444 468888752 58889988
Q ss_pred CCCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. -.+..+|+..|+-+|...+
T Consensus 83 ------~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05113 83 ------NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF 121 (256)
T ss_pred ------CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 43322 112222 2477889999999997543
No 282
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=46.99 E-value=76 Score=27.62 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=56.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ..+..|.+++.-....+........|..+++.+...++ .++++.|.. ..|.||++
T Consensus 13 ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~ 86 (284)
T cd06620 13 LGAGNGGSVSKVKHI-----PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-VSFYGAFLNENNICMCMEFMD 86 (284)
T ss_pred cCCCCCeEEEEEEEc-----CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-ceEeeeEecCCEEEEEEecCC
Confidence 344556778888753 34567788876543311122233467777777654444 456666653 48899999
Q ss_pred CCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcC
Q psy15662 154 DKETRKARSLKY-----SELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 154 ~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~ 186 (256)
+.+|.. ..+.. -.+..+|+..|+.+|.
T Consensus 87 ------~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 121 (284)
T cd06620 87 ------CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN 121 (284)
T ss_pred ------CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 666631 11111 2355677777888885
No 283
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=46.95 E-value=70 Score=27.08 Aligned_cols=97 Identities=18% Similarity=0.107 Sum_probs=54.7
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
|-....|.+.. ...+..++++.+-.... +....+..+|..+++.+...++ .++++.|.+ ..+.||++
T Consensus 11 g~~g~v~~~~~-----~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~~~~~~~~~~~~~~~~~e~~~-- 82 (256)
T cd08221 11 GAFGEATLYRR-----TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-IAYYNHFMDDNTLLIEMEYAN-- 82 (256)
T ss_pred cCCceEEEEEE-----cCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe-eEEEeEEecCCeEEEEEEecC--
Confidence 33344555554 24467788887643220 1222334568888887754444 456666653 35678888
Q ss_pred CCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..++|+.|+.+|+..+
T Consensus 83 ----~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (256)
T cd08221 83 ----GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI 122 (256)
T ss_pred ----CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 544331 01111 2356788999999998653
No 284
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=46.83 E-value=59 Score=28.10 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=57.8
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
.|---.+|++.............|.++.+...........-.+|..++..++..++ .++++.+.+ ..+.||++
T Consensus 15 ~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-~~~~~~~~~~~~~~~~~e~~~-- 91 (283)
T cd05048 15 EGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI-VCLLGVCTKEQPTCMLFEYLA-- 91 (283)
T ss_pred CccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCccc-ceEEEEEcCCCceEEEEecCC--
Confidence 35555778887643211123357888887654311111122457777766654444 457777653 36778887
Q ss_pred CCCccccCCC---------------------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY---------------------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~---------------------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 92 ----~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i 145 (283)
T cd05048 92 ----HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF 145 (283)
T ss_pred ----CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 443320 01111 1477889999999998653
No 285
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=46.68 E-value=67 Score=28.86 Aligned_cols=101 Identities=12% Similarity=0.119 Sum_probs=57.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|--..+|++... ..+..|.++++-.... .+.......|..+++.+ .+..-+++++.|.. ..|.|
T Consensus 8 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 8 LVGRGHFGEVQVVREK-----ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred EEEeccCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEEC
Confidence 3444555678888753 4567888988754320 00111123455555544 34445667777753 37788
Q ss_pred eecCCCCCccccCCC------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ +.+|.. ..+... .+..+|+..|+.+|+..+
T Consensus 82 ~~~------~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 123 (330)
T cd05601 82 YQP------GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY 123 (330)
T ss_pred CCC------CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 888 544421 112222 255788999999998643
No 286
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=46.47 E-value=56 Score=27.77 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=59.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... . ...+.++++..... ....+-..|..+++.+...++ .++++.+.. ..|.||.+
T Consensus 14 ig~g~~~~vy~~~~~-----~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 14 LGSGYFGEVWEGLWK-----N-RVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHL-ISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred hccCCCccEEEeEec-----C-CCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcch-hheeeeEecCCCeEEEEeecc
Confidence 344566788888863 2 57788888765541 122334467777777754443 356666654 37888888
Q ss_pred CCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+-+|.. ..+.. ..+..+|+..|+.+|...
T Consensus 86 ------~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 86 ------KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred ------cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 543321 11222 236678888999999864
No 287
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=46.04 E-value=66 Score=30.75 Aligned_cols=85 Identities=18% Similarity=0.111 Sum_probs=47.5
Q ss_pred ccccceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC--
Q psy15662 69 IITDSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG-- 145 (256)
Q Consensus 69 ~~~~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n-- 145 (256)
+.+++.+. .+..|-.-.+|++....-........|.+++.-..........-..|..++..|..+--=.+++|.|..
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 33445443 445577788899875421112334678899886443111111233577777777633333456776653
Q ss_pred --eEEEEeec
Q psy15662 146 --GRIEEYIP 153 (256)
Q Consensus 146 --GrIEefi~ 153 (256)
..|.||++
T Consensus 115 ~~~iv~E~~~ 124 (401)
T cd05107 115 PIYIITEYCR 124 (401)
T ss_pred CcEEEEeccC
Confidence 36778877
No 288
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=45.96 E-value=90 Score=26.99 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=59.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC---CeEEEEeec
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP---GGRIEEYIP 153 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---nGrIEefi~ 153 (256)
.+..|-...+|++...... ......+.++.............-..|..+++.+...++. ++++.+. ...+.||++
T Consensus 14 ~ig~g~~g~v~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~v~e~~~ 91 (279)
T cd05057 14 VLGSGAFGTVYKGVWIPEG-EKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVV-RLLGICLSSQVQLITQLMP 91 (279)
T ss_pred eecCCCCccEEEEEEecCC-CCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcc-eEEEEEecCceEEEEecCC
Confidence 3455666788888764211 1123357888776544111122233577777777555544 4666654 357888888
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|.. ..+.. -.+..+||..|+.+|...
T Consensus 92 ------~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 92 ------LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred ------CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 544431 11222 235678999999999854
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=45.77 E-value=29 Score=30.81 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=58.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|....+|++... ..+..|+++++..... .+...+...|..+++.+...++ .++++.|.. ..|.|
T Consensus 22 ~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 95 (307)
T cd06607 22 EIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNT-IEYKGCYLREHTAWLVME 95 (307)
T ss_pred eecCCCCeEEEEEEEc-----CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCE-EEEEEEEEeCCeEEEEHH
Confidence 4555666788988863 3467898998754321 0112233467777777654333 356666542 36778
Q ss_pred eecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ |..+. ...+... .+..+||..|+-+|...+
T Consensus 96 ~~~------g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i 136 (307)
T cd06607 96 YCL------GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER 136 (307)
T ss_pred hhC------CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 877 43211 1122222 256689999999998654
No 290
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=45.67 E-value=94 Score=27.21 Aligned_cols=98 Identities=10% Similarity=0.133 Sum_probs=55.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHh--cCCCCceeEeeCC----eEEEEee
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSE--RKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~n----GrIEefi 152 (256)
|-...+|++... ..+..+.++++-..... ..-.....|..+.++++. +..-+.+++.|.. ..|.||+
T Consensus 5 G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (279)
T cd05633 5 GGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM 79 (279)
T ss_pred CCCeEEEEEEEC-----CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence 445578887753 34678888877543210 000112234444455432 3344566666643 4788999
Q ss_pred cCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|.. ..+... .+..+||..|+.+|...+
T Consensus 80 ~------~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i 118 (279)
T cd05633 80 N------GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFV 118 (279)
T ss_pred C------CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 8 666631 112222 356778899999997643
No 291
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=45.64 E-value=94 Score=26.95 Aligned_cols=103 Identities=19% Similarity=0.220 Sum_probs=56.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--C----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--G----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n----GrIEef 151 (256)
+..|-...+|.+.+.. ........|+++++-.............|..+++.+...++ +++++.|. + ..|.||
T Consensus 12 lg~g~~g~v~~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~~~lv~e~ 89 (283)
T cd05080 12 LGEGHFGKVSLYCYDP-ANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI-VKYKGCCSEQGGKGLQLIMEY 89 (283)
T ss_pred cccCCCcEEEEeeEcc-ccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCE-eeEEEEEecCCCceEEEEecC
Confidence 3344445566654321 11234567888887544310112233467778877754444 45777653 1 378888
Q ss_pred ecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
++ +.+|.. ..+.. -.+..+|+..|+.+|...
T Consensus 90 ~~------~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 90 VP------LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred CC------CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 88 555431 11222 235678888899999765
No 292
>KOG2270|consensus
Probab=44.88 E-value=1.1e+02 Score=30.61 Aligned_cols=59 Identities=14% Similarity=0.135 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcCC-CCceeEeeCCeEEEEeecCCCCCccc---cCCCCCCCC---hHHHHHHHHHHHhh
Q psy15662 122 TDSVIFTLLSERKL-GPTLHGVFPGGRIEEYIPDKETRKAR---SLKYSELTD---PAISRKIAEKMADI 184 (256)
Q Consensus 122 ~E~~i~~~Ls~~gl-gPkl~g~F~nGrIEefi~~~~~~~gr---~Lt~~el~d---p~i~~~IA~~La~l 184 (256)
.|..+++.|...|| .|+.+..=.+..|-+||- |.|- -|...+|.. ..++.++++.|++|
T Consensus 215 KE~RNLkRl~~aGIP~PePIlLk~hVLVM~FlG----rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~l 280 (520)
T KOG2270|consen 215 KEMRNLKRLNNAGIPCPEPILLKNHVLVMEFLG----RDGWAAPKLKDASLSTSKARELYQQCVRIMRRL 280 (520)
T ss_pred HHHHHHHHHHhcCCCCCCceeeecceEeeeecc----CCCCcCcccccccCChHHHHHHHHHHHHHHHHH
Confidence 58889999999999 688888888999999997 2232 233333331 24566777777765
No 293
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=44.84 E-value=1.3e+02 Score=26.41 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=56.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC---C---eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP---G---GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---n---GrIEef 151 (256)
+..|-...+|++...+ ......|.++...... .......|..+++.+...++- ++++.|. + ..|.+|
T Consensus 9 lG~G~~g~Vy~~~~~~---~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 9 VGRGTYGHVYKAKRKD---GKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVI-ALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eccCCCeeEEEEEecC---CCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCee-eEEEEEeccCCCeEEEEEee
Confidence 4455566789888642 2345677777664332 222345688888877654443 4566552 1 367788
Q ss_pred ecCCCCCccccC-------------CCCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSL-------------KYSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~L-------------t~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
.+ +.-+ ....+.. -.+..+||..|+-+|+..
T Consensus 82 ~~------~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ 128 (317)
T cd07867 82 AE------HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW 128 (317)
T ss_pred eC------CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 76 3210 0011211 246778999999999864
No 294
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=44.36 E-value=54 Score=28.83 Aligned_cols=84 Identities=18% Similarity=0.243 Sum_probs=50.4
Q ss_pred CCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC----C----
Q psy15662 99 EPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY----S---- 166 (256)
Q Consensus 99 ~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~----~---- 166 (256)
.+..|.++++..........+-..|..+++.+...++ .++++.|.. ..|.||++ +.+|.. .
T Consensus 43 ~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~------~~~L~~~l~~~~~~~ 115 (295)
T cd05097 43 QPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNI-IRLLGVCVSDDPLCMITEYME------NGDLNQFLSQREIES 115 (295)
T ss_pred CceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCc-CeEEEEEcCCCccEEEEecCC------CCcHHHHHHhccccc
Confidence 3456888887654211111223457788887765443 567777653 47889988 554421 0
Q ss_pred ---------CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 167 ---------ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 167 ---------el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+.. ..+..+||..|+-+|...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 150 (295)
T cd05097 116 TFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF 150 (295)
T ss_pred cccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe
Confidence 1111 2367789999999998653
No 295
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=44.31 E-value=1.1e+02 Score=26.98 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=57.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cc-cccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RA-LESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~-~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEef 151 (256)
+..|--..+|++... ..+..|.++........ .. ......|..+++.+....+- ++++.|. -..|.+|
T Consensus 8 ig~G~~g~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~-~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 8 LGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVV-SLAYAYETKDALCLVLTL 81 (285)
T ss_pred eecCCCeEEEEEEEc-----CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCee-eeeEEEecCCEEEEEEEe
Confidence 434555567887763 35678888887543200 00 11123577788777655444 4555554 2578888
Q ss_pred ecCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 152 IPDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++ |.+|.. ..+.. -.+..+++..|+-+|...+
T Consensus 82 ~~------g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05630 82 MN------GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI 123 (285)
T ss_pred cC------CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 88 655521 11221 1356678889999998543
No 296
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=44.30 E-value=78 Score=26.91 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=54.4
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC-C--eEEEEeecCCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP-G--GRIEEYIPDKET 157 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n--GrIEefi~~~~~ 157 (256)
|-...+|++.. ....|+++++-... ....-..|..+++.+...++- ++++.|. + ..+.+|++
T Consensus 17 g~~g~v~~~~~-------~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~-~~~~~~~~~~~~~v~e~~~---- 81 (254)
T cd05083 17 GEFGAVLQGEY-------TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLV-RLLGVILHNGLYIVMELMS---- 81 (254)
T ss_pred CCCCceEeccc-------CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcC-eEEEEEcCCCcEEEEECCC----
Confidence 44456676643 35678888875432 112234577777777665554 4666654 2 47788888
Q ss_pred CccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. ..+..+|+..|+.+|...+
T Consensus 82 --~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~ 121 (254)
T cd05083 82 --KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL 121 (254)
T ss_pred --CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 655521 11222 2356688999999998653
No 297
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=44.22 E-value=50 Score=30.83 Aligned_cols=82 Identities=15% Similarity=0.087 Sum_probs=45.2
Q ss_pred cceEEee-cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----e
Q psy15662 72 DSVIFTL-LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----G 146 (256)
Q Consensus 72 ~~~i~~l-~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----G 146 (256)
++++... .-|--..+|++.............|.+++.-..........-..|..+++.+..+.--.++++.|.. .
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 3444433 3355667888764321112334578898875433111111223588888877555555678887754 3
Q ss_pred EEEEeec
Q psy15662 147 RIEEYIP 153 (256)
Q Consensus 147 rIEefi~ 153 (256)
.|.||++
T Consensus 119 lv~ey~~ 125 (374)
T cd05106 119 VITEYCC 125 (374)
T ss_pred EeHhhcc
Confidence 6667776
No 298
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=44.13 E-value=1e+02 Score=28.70 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=63.1
Q ss_pred cccceEEee-cCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC-
Q psy15662 70 ITDSVIFTL-LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG- 145 (256)
Q Consensus 70 ~~~~~i~~l-~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n- 145 (256)
.+++++... .-|-...+|++... ..+..|.++++..... .........|..+++.+...++ +++++.|..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-v~~~~~~~~~ 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK-----SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-VQLHYAFQDD 115 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-ceEEEEEecC
Confidence 445555544 44666678988763 4567899998753210 0011112356777776654444 557777654
Q ss_pred ---eEEEEeecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 ---GRIEEYIPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ---GrIEefi~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ |.+|.. ..+.. -.+..+||..|+-+|+..+
T Consensus 116 ~~~~lv~Ey~~------gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 163 (370)
T cd05596 116 KYLYMVMEYMP------GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGF 163 (370)
T ss_pred CEEEEEEcCCC------CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 37889998 554421 11211 1255688999999998653
No 299
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=43.97 E-value=71 Score=28.77 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=56.3
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|--..+|++... ..+..|.++++-.... .........|..+++.+...++ .++++.|.. ..|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~e~~~- 78 (323)
T cd05571 6 GTFGKVILVREK-----ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL-TALKYSFQTHDRLCFVMEYAN- 78 (323)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CCEEEEEEcCCEEEEEEeCCC-
Confidence 445567887753 3567888998754320 0111223356666666654444 346666653 37888888
Q ss_pred CCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|..|. ..-+..+ .+..+|+..|+-+|+..+
T Consensus 79 -----~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 116 (323)
T cd05571 79 -----GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDV 116 (323)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 55441 1112222 356789999999998754
No 300
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=43.61 E-value=44 Score=28.22 Aligned_cols=99 Identities=23% Similarity=0.276 Sum_probs=63.3
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccH---HHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI---ITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR---~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
.+.-|-.-.+|++... ..+..|+++++..... .-..+ ..|..+++.+...++ .++++.+.. -.|.
T Consensus 6 ~lg~G~~g~v~~~~~~-----~~~~~~~~K~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~i-~~~~~~~~~~~~~~~v~ 77 (260)
T PF00069_consen 6 KLGSGGFGTVYKAKNK-----KNGQKVAVKIIDKSEI--EEEEREENIREIKILRRLRHPNI-VQILDVFQDDNYLYIVM 77 (260)
T ss_dssp EEEEESSEEEEEEEET-----TTTEEEEEEEEESTTH--HHHHHHHHHHHHHHHHHHTBTTB-CHEEEEEEESSEEEEEE
T ss_pred EEEeCCCEEEEEEEEC-----CCCeEEEEEEeccccc--cccccchhhhhhhcccccccccc-ccccccccccccccccc
Confidence 3433445567888873 4567899999887652 22222 238888888855555 567888752 3688
Q ss_pred EeecCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+|++ +.+|. ...+.. ..+..+|++.|+.||+..+
T Consensus 78 ~~~~------~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i 119 (260)
T PF00069_consen 78 EYCP------GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGI 119 (260)
T ss_dssp EEET------TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred cccc------cccccccccccccccccccccccccccccccccccccc
Confidence 8888 64442 122211 3477788899999998653
No 301
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=43.59 E-value=66 Score=29.04 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=56.1
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|---.+|++... ..+..|.++++-.... .........|..+++.+...++ .++++.|.. ..|.||++
T Consensus 6 G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-~~~~~~~~~~~~~~lv~E~~~- 78 (323)
T cd05595 6 GTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-TALKYAFQTHDRLCFVMEYAN- 78 (323)
T ss_pred CCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-cceeeEEecCCEEEEEEeCCC-
Confidence 334567777753 3567889998754320 0111122356666666644443 456777753 47889998
Q ss_pred CCCCccccCC----CC-CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 155 KETRKARSLK----YS-ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 155 ~~~~~gr~Lt----~~-el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. .. .+.. ..+..+|+..|+-+|+..+
T Consensus 79 -----~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 116 (323)
T cd05595 79 -----GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 116 (323)
T ss_pred -----CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55442 11 1222 2356788999999998653
No 302
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=43.57 E-value=69 Score=28.88 Aligned_cols=100 Identities=8% Similarity=0.081 Sum_probs=56.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccH-HHHHHHHHHHHhcCCCCceeEeeCC--------eEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESI-ITDSVIFTLLSERKLGPTLHGVFPG--------GRI 148 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR-~~E~~i~~~Ls~~glgPkl~g~F~n--------GrI 148 (256)
+..|-...+|++... ..+..|++|.+...........+ ..|..+++.+. +.--+++++.|.. ..|
T Consensus 13 lg~g~~g~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~lv 86 (334)
T cd07855 13 IGSGAYGVVCSAIDT-----RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKDVYVV 86 (334)
T ss_pred eecCCCeEEEEEEEc-----CCCCEEEEEEeccccccccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCceEEEE
Confidence 444445567887753 34678999987654211112222 35777777776 3334556665531 377
Q ss_pred EEeecCCCCCcccc---C-CCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARS---L-KYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~---L-t~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+|+. +.- + ....+.. ..+..+|+..|+.+|...+
T Consensus 87 ~e~~~------~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 87 MDLME------SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred Eehhh------hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 78876 421 0 0111222 2356688999999998664
No 303
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=43.11 E-value=81 Score=29.12 Aligned_cols=78 Identities=12% Similarity=-0.048 Sum_probs=43.2
Q ss_pred CceEEEEecCCCCCccccccH-HHHHHHHHHHHhcCCC--CceeEeeCCeEEEEeecCCCCCccc--cCCCCCCCChHHH
Q psy15662 100 PSEVLLRIYGQTHGERALESI-ITDSVIFTLLSERKLG--PTLHGVFPGGRIEEYIPDKETRKAR--SLKYSELTDPAIS 174 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR-~~E~~i~~~Ls~~glg--Pkl~g~F~nGrIEefi~~~~~~~gr--~Lt~~el~dp~i~ 174 (256)
...++|+.+-..+ .++ .....++..|+++|+. |+++-.=.|..+ --+. |. .|.+-.-......
T Consensus 28 ~g~y~Lk~~e~~~-----~~~l~f~~~~~~~L~~~G~~~v~~~i~tk~G~~~-~~~~------g~~y~L~~w~~~~~~~~ 95 (313)
T TIGR02905 28 NQAYLIVPVDGLE-----EEELAELMAMSDYLQQAGDETVLELVKTKFGQSS-ALID------GVSYYLFKAPEFNERRG 95 (313)
T ss_pred CceEEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCcccceeecCCCCEe-EEEC------CEEEEEEeCCCcccchh
Confidence 5678888874332 223 3345667889999984 777765554333 2222 22 1111111111111
Q ss_pred HHHHHHHHhhcCCCC
Q psy15662 175 RKIAEKMADIHLMQI 189 (256)
Q Consensus 175 ~~IA~~La~lH~~~i 189 (256)
..+|+.||+||....
T Consensus 96 ~~~~~~LA~lH~as~ 110 (313)
T TIGR02905 96 VDLGRELATFHKRGR 110 (313)
T ss_pred HHHHHHHHHHHHhcC
Confidence 389999999998543
No 304
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=43.02 E-value=74 Score=28.64 Aligned_cols=97 Identities=10% Similarity=0.118 Sum_probs=52.0
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHH-HHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVI-FTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i-~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
|-...+|++... ..+..|.++++...... ........|..+ ++.+. +..-.++++.|.. ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 6 GSFGKVLLAKRK-----LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCC
Confidence 444567777753 45678999998653200 001111122222 22222 2233456777653 47888888
Q ss_pred CCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|..|. ...+.. ..+..+|+..|+.+|...+
T Consensus 80 ------~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi 117 (325)
T cd05604 80 ------GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI 117 (325)
T ss_pred ------CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 54431 111222 2366789999999998653
No 305
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=42.82 E-value=42 Score=29.77 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=58.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeec
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIP 153 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~ 153 (256)
.+..|-...+|++...... ......|.++++-.............|..+++.+...++ .+++|.+.. ..+.+|.+
T Consensus 14 ~lg~G~~g~vy~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-v~~~~~~~~~~~~~v~e~~~ 91 (303)
T cd05110 14 VLGSGAFGTVYKGIWVPEG-ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL-VRLLGVCLSPTIQLVTQLMP 91 (303)
T ss_pred ccccCCCccEEEEEEecCC-CcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-ccEEEEEcCCCceeeehhcC
Confidence 3444556678998764211 111235778877654421111123457777777755554 457777643 36777887
Q ss_pred CCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 154 DKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 154 ~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 92 ------~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 92 ------HGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred ------CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 433221 11222 2456789999999998653
No 306
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=42.81 E-value=28 Score=31.64 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=28.6
Q ss_pred eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 146 GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
..|.|||+ |..|+.-.-.++.+...|++.|.++|...
T Consensus 119 ~ll~EYIe------G~~l~d~~~i~e~~~~ki~~~ikqlH~~G 155 (229)
T PF06176_consen 119 VLLMEYIE------GVELNDIEDIDEDLAEKIVEAIKQLHKHG 155 (229)
T ss_pred EEEEEEec------CeecccchhcCHHHHHHHHHHHHHHHHcC
Confidence 47999999 99997433234567788999999999864
No 307
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=42.77 E-value=1.2e+02 Score=25.70 Aligned_cols=100 Identities=9% Similarity=0.074 Sum_probs=58.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|--...|.+... ..+..|+++.+..... .....+-..|..+++.+...++ +++++.|.. ..|.||+
T Consensus 8 lg~g~~g~~~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 8 IGEGSFGKAILVKSK-----EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-VQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred eccCCceEEEEEEEc-----CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-eeeEeeecCCCeEEEEEecC
Confidence 334555577877753 3467888887753210 0112233456677777655444 457877763 3778888
Q ss_pred cCCCCCccccCCC-------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+.. -.+..+||..|+.+|...+
T Consensus 82 ~------~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (256)
T cd08218 82 E------GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI 122 (256)
T ss_pred C------CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 8 554421 01111 2356689999999997654
No 308
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=41.96 E-value=62 Score=28.95 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=55.4
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKET 157 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~ 157 (256)
-..+|++.... ....+..|.++++-..... .....-..|..+++.+...++- ++++.|.. ..|.||++
T Consensus 9 ~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~lv~e~~~---- 81 (318)
T cd05582 9 FGKVFLVRKIT--GPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIV-KLHYAFQTEGKLYLILDFLR---- 81 (318)
T ss_pred CEEEEEEEEec--cCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcc-cEEEEEEcCCEEEEEEcCCC----
Confidence 34567766421 1235678889987643200 0111123467777766554544 57777753 27888888
Q ss_pred CccccCC----CC-CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 158 RKARSLK----YS-ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 158 ~~gr~Lt----~~-el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+..|. .. .+.. -.+..+||+.|+-+|...+
T Consensus 82 --~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i 119 (318)
T cd05582 82 --GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 119 (318)
T ss_pred --CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 54431 11 1211 2366789999999998654
No 309
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=41.78 E-value=1.2e+02 Score=27.59 Aligned_cols=101 Identities=12% Similarity=0.139 Sum_probs=59.2
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeC----------C
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFP----------G 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----------n 145 (256)
.+..|--..+|++... ..+..|.++++.....+ ........|..+++.+..-++- ++++.|. .
T Consensus 23 ~lg~g~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~~~~~~ 96 (353)
T cd07850 23 PIGSGAQGIVCAAYDT-----VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNII-GLLNVFTPQKSLEEFQDV 96 (353)
T ss_pred EeccCCCEEEEEEEEC-----CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCc-ceeeeeccCCCccccCcE
Confidence 3445556677887753 35678999988643210 1112233577888877655554 4666653 1
Q ss_pred eEEEEeecCCCCCccccCCC--CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 146 GRIEEYIPDKETRKARSLKY--SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt~--~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.-+.. ..+... .+..+|+..|+.+|...+
T Consensus 97 ~lv~e~~~------~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (353)
T cd07850 97 YLVMELMD------ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 139 (353)
T ss_pred EEEEeccC------CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 57888887 521110 112222 357789999999998653
No 310
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=40.95 E-value=11 Score=33.11 Aligned_cols=17 Identities=41% Similarity=0.690 Sum_probs=14.4
Q ss_pred EEEeccceeeeeEEEEe
Q psy15662 24 VKRMSGGLTNMLYHVTL 40 (256)
Q Consensus 24 v~~isggltN~l~~v~~ 40 (256)
|.+++||+||.+|.++.
T Consensus 1 ~~~~~~G~tn~~y~~~~ 17 (256)
T TIGR02721 1 VQTLSGGLTNRSWRIEH 17 (256)
T ss_pred CCcCCCcCcCCeEEEEe
Confidence 45789999999999874
No 311
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=40.79 E-value=88 Score=28.74 Aligned_cols=109 Identities=12% Similarity=0.157 Sum_probs=62.5
Q ss_pred cccceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC-
Q psy15662 70 ITDSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG- 145 (256)
Q Consensus 70 ~~~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n- 145 (256)
.+++++. .+..|---.+|++.... .....|.++++-.... ......-..|..+++.+...+ -.++++.|..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~-Iv~~~~~~~~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKN----EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPF-CVNLYGSFKDE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEEC----CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCC-CcceEEEEEeC
Confidence 3445443 45556667789887542 2235788887743220 011112235777777775433 4468888764
Q ss_pred ---eEEEEeecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 ---GRIEEYIPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 ---GrIEefi~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ |..|.. ..+.. ..+..+|+..|+-+|+..+
T Consensus 104 ~~~~lv~Ey~~------~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 152 (340)
T PTZ00426 104 SYLYLVLEFVI------GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI 152 (340)
T ss_pred CEEEEEEeCCC------CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 26888888 544421 11211 2356788888999998653
No 312
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=40.05 E-value=96 Score=27.08 Aligned_cols=96 Identities=9% Similarity=0.113 Sum_probs=52.5
Q ss_pred cccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHHHHHHHHh--cCCCCceeEeeCC----eEEEEeec
Q psy15662 82 LTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSVIFTLLSE--RKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 82 lTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~n----GrIEefi~ 153 (256)
-...+|++... .....|.++++-..... ..-..+..|..+.++++. +..-+++++.|.. ..|.||++
T Consensus 6 ~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 6 GFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CCeEEEEEEEe-----cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 34567777653 34678889887643200 011113345555555543 2334456666653 47788888
Q ss_pred CCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|..|.. ..+... .+..++++.|+.+|...
T Consensus 81 ------g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ 117 (278)
T cd05606 81 ------GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF 117 (278)
T ss_pred ------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 655521 112222 25667888888899754
No 313
>PHA03207 serine/threonine kinase US3; Provisional
Probab=40.03 E-value=1.3e+02 Score=28.18 Aligned_cols=97 Identities=15% Similarity=0.137 Sum_probs=55.7
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+.-|-.-.+|++...+ ......|+++..-... ...+|..+++.|...++ .++++.|.. ..+.+|.
T Consensus 99 ~Lg~G~~g~Vy~~~~~~---~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 168 (392)
T PHA03207 99 SLTPGSEGEVFVCTKHG---DEQRKKVIVKAVTGGK------TPGREIDILKTISHRAI-INLIHAYRWKSTVCMVMPKY 168 (392)
T ss_pred eecCCCCeEEEEEEEcC---CccceeEEEEeccccc------cHHHHHHHHHhcCCCCc-cceeeeEeeCCEEEEEehhc
Confidence 44556666788886532 2345678888754322 34578889888865554 456666653 2334443
Q ss_pred cCCCCCccccCC----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
. +..+. ...+.. -.+..+|+..|+-+|...+
T Consensus 169 ~------~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~gi 206 (392)
T PHA03207 169 K------CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGI 206 (392)
T ss_pred C------CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3 22111 011111 2466788999999998653
No 314
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=40.00 E-value=2e+02 Score=25.62 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=60.0
Q ss_pred cccceeEEEeec---CCCCCCCceEEEEecCCCCCc----cccccHHHHHHHHHHH----Hh--------cCCCCceeEe
Q psy15662 82 LTNMLYHVTLLQ---PIQSSEPSEVLLRIYGQTHGE----RALESIITDSVIFTLL----SE--------RKLGPTLHGV 142 (256)
Q Consensus 82 lTN~~ykv~~~~---~~~~~~~~~vLlRIyG~~t~e----~~~idR~~E~~i~~~L----s~--------~glgPkl~g~ 142 (256)
.+-.+|+|+..- ......+.+++++..-..... .....-.+|..+.+.+ .+ ..+.|++|+.
T Consensus 5 y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~~~ 84 (294)
T PF02958_consen 5 YLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCYYA 84 (294)
T ss_pred ceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEEEe
Confidence 344566666532 111345677888885421100 0111223566655422 11 1468999998
Q ss_pred eCC-eEEEEeecCCCCCccccCCCCCCCChHHHHHHHHHHHhhcCCC
Q psy15662 143 FPG-GRIEEYIPDKETRKARSLKYSELTDPAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 143 F~n-GrIEefi~~~~~~~gr~Lt~~el~dp~i~~~IA~~La~lH~~~ 188 (256)
-.. +..-=-++|+...|.+.....+.-+.+-.+.+.+.||+||...
T Consensus 85 ~~~~~~~~lvlEDL~~~g~~~~~~~~~l~~~~~~~~l~~LA~fHA~s 131 (294)
T PF02958_consen 85 DEDPGDEVLVLEDLSEKGYRMGDRRDGLDLEHAELVLKKLAKFHAAS 131 (294)
T ss_pred ccCCCceeeehhhhhhcCCcccccccCCCHHHHHHHHHHHHHHHHHH
Confidence 732 2122223444455556666556677888999999999999854
No 315
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=39.85 E-value=1.9e+02 Score=24.57 Aligned_cols=97 Identities=8% Similarity=0.144 Sum_probs=55.4
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCCCCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDKETR 158 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~~~~ 158 (256)
-..+|++.... ......+.+++......+. .......|..+++.+..-++ .+++|.+.+ ..|.+|.+
T Consensus 8 ~g~v~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~lv~e~~~----- 78 (257)
T cd05116 8 FGTVKKGMYKM---KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI-VRMIGICEAESWMLVMELAE----- 78 (257)
T ss_pred CcceEEeEEec---CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCc-ceEEEEEcCCCcEEEEecCC-----
Confidence 34677765432 2345778899876443111 11223456666666644333 456777654 46788888
Q ss_pred ccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. ..+..+|+..|+-+|...+
T Consensus 79 -~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 116 (257)
T cd05116 79 -LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF 116 (257)
T ss_pred -CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 55442 112222 3466788999999998653
No 316
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=39.85 E-value=1.6e+02 Score=24.94 Aligned_cols=102 Identities=15% Similarity=0.126 Sum_probs=59.7
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC---eEEEEeecCC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG---GRIEEYIPDK 155 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---GrIEefi~~~ 155 (256)
..|-...+|++..... ......|.++.+..........+...|..+++.+...++- ++++.|.. ..+.||.+
T Consensus 4 g~g~~~~v~~~~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~v~e~~~-- 78 (257)
T cd05040 4 GDGSFGVVRRGEWSTS--GGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLI-RLYGVVLTHPLMMVTELAP-- 78 (257)
T ss_pred CccCcccEEeeeEecC--CCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCcc-ceeEEEcCCeEEEEEEecC--
Confidence 3455668888876421 1223368899988765211122334677777777654543 45666543 46777777
Q ss_pred CCCccccCCC-------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY-------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~-------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+..+ .+..+|+..|+.+|...+
T Consensus 79 ----~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 79 ----LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ----CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 555441 112222 245689999999998654
No 317
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=39.85 E-value=2.4e+02 Score=24.03 Aligned_cols=102 Identities=20% Similarity=0.247 Sum_probs=56.8
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++....+ ......+.++............+...|..+++.+...+ -.++++.|.. ..|.||++
T Consensus 13 lg~g~~g~vy~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~ 89 (268)
T cd05063 13 IGAGEFGEVFRGILKMP--GRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN-IIRLEGVVTKFKPAMIITEYME 89 (268)
T ss_pred ecCCCCccEEEEEEecC--CCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEccCCCcEEEEEcCC
Confidence 34455667898886421 11233677887765431111112234555555554333 3456777653 48889988
Q ss_pred CCCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+.+|. ...+.. -.+..+++..|+.+|...
T Consensus 90 ------~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 127 (268)
T cd05063 90 ------NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127 (268)
T ss_pred ------CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 55442 112222 235677888999999865
No 318
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=39.80 E-value=1.3e+02 Score=26.90 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=56.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccc-------c-------ccHHHHHHHHHHHHhcCCCCceeEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERA-------L-------ESIITDSVIFTLLSERKLGPTLHGVF 143 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~-------~-------idR~~E~~i~~~Ls~~glgPkl~g~F 143 (256)
+..|-...+|++... ..+..|.++++-.... .. . ..-..|..+++.+...++ .++++.|
T Consensus 17 ig~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~ 89 (335)
T PTZ00024 17 LGEGTYGKVEKAYDT-----LTGKIVAIKKVKIIEI-SNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI-MGLVDVY 89 (335)
T ss_pred ccCCCceeEEEEEEC-----CCCCeEEEEEeecccc-ccccccchhhhcccccchhHHHHHHHHHhCCCcce-eeeeEEE
Confidence 444555568888752 3467889998754431 00 0 012357777777754444 3467776
Q ss_pred CC----eEEEEeecCCCCCccccC---CC-CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 144 PG----GRIEEYIPDKETRKARSL---KY-SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 144 ~n----GrIEefi~~~~~~~gr~L---t~-~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.. ..+.||++ |.-. .. ..+.. ..+..+|+..|+.+|...+
T Consensus 90 ~~~~~~~lv~e~~~------~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i 140 (335)
T PTZ00024 90 VEGDFINLVMDIMA------SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYF 140 (335)
T ss_pred ecCCcEEEEEeccc------cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 53 36777777 5211 00 11222 2467788899999998653
No 319
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=39.68 E-value=2.3e+02 Score=23.85 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=57.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-...+|++... ....+.+++.-... ....+-..|..+++.+...++- ++++.|.. ..+.+|++
T Consensus 12 ig~g~~g~v~~~~~~------~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 12 IGSGQFGLVWLGYWL------EKRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLV-QLYGVCTERSPICLVFEFME 82 (256)
T ss_pred ecCcccceEEEEEEe------CCCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCee-eEEEEEccCCceEEEEEcCC
Confidence 444555678888653 24578888775433 1222345688888888655544 56777653 57888888
Q ss_pred CCCCCccccCC------CCCCCChH---HHHHHHHHHHhhcCCC
Q psy15662 154 DKETRKARSLK------YSELTDPA---ISRKIAEKMADIHLMQ 188 (256)
Q Consensus 154 ~~~~~~gr~Lt------~~el~dp~---i~~~IA~~La~lH~~~ 188 (256)
+-+|. ...+..+. +..+++..++.+|...
T Consensus 83 ------~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~ 120 (256)
T cd05112 83 ------HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN 120 (256)
T ss_pred ------CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 54442 11222222 4456777888888654
No 320
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=39.35 E-value=51 Score=29.73 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=57.6
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCC---ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG---ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~---e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.|---.+|++.... ....+..|.++++..... .........|..+++.+...++- ++++.|.. ..|.||+
T Consensus 6 ~G~~g~V~~~~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv-~~~~~~~~~~~~~lv~e~~ 82 (323)
T cd05584 6 KGGYGKVFQVRKVT--GADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV-DLIYAFQTGGKLYLILEYL 82 (323)
T ss_pred ecCCeEEEEEEEcc--cCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchh-ceeeEEecCCeEEEEEeCC
Confidence 34445678776531 123567788888754210 00111224677888887655554 46666643 3678888
Q ss_pred cCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ |.+|.. .-+.. ..+..+|+..|+.+|...+
T Consensus 83 ~------~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 83 S------GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred C------CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 8 554421 11111 1256789999999998654
No 321
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=39.19 E-value=94 Score=28.05 Aligned_cols=100 Identities=11% Similarity=0.125 Sum_probs=56.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC---------CeEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP---------GGRI 148 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---------nGrI 148 (256)
+.-|-...+|++... .++..|.++.+..............|..+++.+...++ .++++++. -..+
T Consensus 13 lg~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv 86 (336)
T cd07849 13 IGEGAYGMVCSATHK-----PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI-IGILDIIRPPSFESFNDVYIV 86 (336)
T ss_pred EEecCCeEEEEEEEc-----CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCc-CchhheeecccccccceEEEE
Confidence 444555678888753 34678999988643311122223457777777764444 34554432 1366
Q ss_pred EEeecCCCCCcccc---CCCCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARS---LKYSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~---Lt~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
.+|++ +.- +....+... .+..+|+..|+.+|+..+
T Consensus 87 ~e~~~------~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~i 127 (336)
T cd07849 87 QELME------TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANV 127 (336)
T ss_pred ehhcc------cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 77777 421 111122222 356688899999998764
No 322
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=39.11 E-value=1.6e+02 Score=25.60 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=56.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCC-CccccccHHHHHHHHHHHHhcCCCCceeEeeCC-----------
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTH-GERALESIITDSVIFTLLSERKLGPTLHGVFPG----------- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t-~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----------- 145 (256)
+..|-...+|++... ..+..|.++++.... .+........|..+++.+..-++- ++++++..
T Consensus 20 lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv-~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 20 IGQGTFGEVFKARHK-----KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVV-NLIEICRTKATPYNRYKGS 93 (310)
T ss_pred eecCCCEEEEEEEEC-----CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCcc-ceEEEEecccccccCCCce
Confidence 444555677888753 356788888775432 011122334688888877655554 45655421
Q ss_pred -eEEEEeecCCCCCcccc---CCCC--CCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 146 -GRIEEYIPDKETRKARS---LKYS--ELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 -GrIEefi~~~~~~~gr~---Lt~~--el~dp---~i~~~IA~~La~lH~~~ 188 (256)
..|.||.. +.. +... .+..+ .+..+||..|+.+|...
T Consensus 94 ~~lv~e~~~------~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 139 (310)
T cd07865 94 FYLVFEFCE------HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK 139 (310)
T ss_pred EEEEEcCCC------cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 46777776 321 1111 22222 36678999999999864
No 323
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=38.94 E-value=48 Score=33.64 Aligned_cols=97 Identities=16% Similarity=0.244 Sum_probs=61.7
Q ss_pred ceEEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCC--CCceeEeeC----C-
Q psy15662 73 SVIFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKL--GPTLHGVFP----G- 145 (256)
Q Consensus 73 ~~i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~gl--gPkl~g~F~----n- 145 (256)
..+..++|--+|....+ +.+++|++|-.-. ..++ =|.++.+.|++.|+ -|.++|.+. +
T Consensus 168 ~~~r~l~~EQSNtSi~~----------g~~~ilKlyRrl~---~G~n--Pe~E~~r~Lte~gf~~vP~llG~v~~~~~~g 232 (528)
T TIGR02457 168 PEVRLLSAEQSNSSLVV----------GDRVVLKLYRKVE---PGIN--PEIEMGRYLTAAGYANIPPLLGSVERVGGDQ 232 (528)
T ss_pred CceeecCCCcCceEEEE----------CCEEEEEEecccC---CCCC--cchHHHHHHHhCCCccCCcccEEEEEEcCCC
Confidence 35667788888876554 4679999998754 3344 45667777888775 688898843 2
Q ss_pred -----eEEEEeecCCCCCccccCCCCC----------------------CCC-hHHHHHHHHHHHhhcC
Q psy15662 146 -----GRIEEYIPDKETRKARSLKYSE----------------------LTD-PAISRKIAEKMADIHL 186 (256)
Q Consensus 146 -----GrIEefi~~~~~~~gr~Lt~~e----------------------l~d-p~i~~~IA~~La~lH~ 186 (256)
|.+.+|++|. ++|=.++.+. +.. ....+.++++.|+||.
T Consensus 233 ~~~tla~lq~fV~nq--gDaW~~tl~~l~r~~e~~~~~~~~~~~~~~~~~~~~~~~a~~LG~rtAemH~ 299 (528)
T TIGR02457 233 APHTLGLLQGYVQNQ--GDAWRWTLGHLKRYIEEQLSPCANGALAPTLIGAGYLEFAGLLGRRLAELHL 299 (528)
T ss_pred CEEeeehHhhhhCCC--ccHHHHHHHHHHHHHHhhhccccccccChhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4677999842 1111111111 111 2357889999999996
No 324
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=38.82 E-value=68 Score=26.96 Aligned_cols=100 Identities=17% Similarity=0.199 Sum_probs=55.2
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccc-cccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERA-LESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~-~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|--..+|++... ..+..+++|.+........ ...-..|..+++.+...++ +++++.|.. ..|.+|.
T Consensus 8 i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 8 LGKGSYGSVYKVKRL-----SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI-ISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ecCCCceeEEEEEEC-----CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCc-hhhhhhhccCCEEEEEehhc
Confidence 444444568888753 3467888988764321011 1111245566665553333 345555543 4677777
Q ss_pred cCCCCCccccCCC---------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY---------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~---------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+ +.+|.. ..+... .+..+++..|+.+|...+
T Consensus 82 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i 124 (256)
T cd08530 82 P------FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI 124 (256)
T ss_pred C------CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 7 554421 122222 456689999999998753
No 325
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=38.59 E-value=1.3e+02 Score=26.11 Aligned_cols=97 Identities=9% Similarity=0.011 Sum_probs=54.5
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
..|-...+|++... ..+..|.++.+-.............|..++..+..+.--+++++.+.. ..+.+|++
T Consensus 13 g~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~- 86 (288)
T cd06616 13 GRGAFGTVNKMLHK-----PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD- 86 (288)
T ss_pred CCCCceEEEEEEEC-----CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-
Confidence 34555678887763 346778888775433111122234566666666655455677877642 36677766
Q ss_pred CCCCccc--cC-------CCCCCCC---hHHHHHHHHHHHhhcC
Q psy15662 155 KETRKAR--SL-------KYSELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 155 ~~~~~gr--~L-------t~~el~d---p~i~~~IA~~La~lH~ 186 (256)
+. .+ ....+.. ..+..+|+..|+-+|.
T Consensus 87 -----~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 125 (288)
T cd06616 87 -----ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE 125 (288)
T ss_pred -----CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 21 11 0011211 2466778888888985
No 326
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=37.90 E-value=2.1e+02 Score=24.71 Aligned_cols=100 Identities=13% Similarity=0.023 Sum_probs=56.1
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHh--cCCCCceeEeeCC---------
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSE--RKLGPTLHGVFPG--------- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~n--------- 145 (256)
+..|-...+|++... .++..|++++.-..... ....+...|..+++.|.. +.--.++++.|..
T Consensus 8 lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~ 82 (288)
T cd07863 8 IGVGAYGTVYKARDP-----HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKV 82 (288)
T ss_pred EeecCCeEEEEEEEC-----CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceE
Confidence 444555677888763 35677888876543211 122234567888877753 3333456665532
Q ss_pred eEEEEeecCCCCCccccC------CCCCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 146 GRIEEYIPDKETRKARSL------KYSELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~L------t~~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
..|.+|++ +.-. ....+..+ .+..+|+..|+-+|+..
T Consensus 83 ~lv~e~~~------~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (288)
T cd07863 83 TLVFEHVD------QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC 128 (288)
T ss_pred EEEEcccc------cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 36777776 3210 01112222 35678888899999764
No 327
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=37.22 E-value=1.1e+02 Score=28.56 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=63.1
Q ss_pred cccccceEEe-ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeC
Q psy15662 68 SIITDSVIFT-LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFP 144 (256)
Q Consensus 68 ~~~~~~~i~~-l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~ 144 (256)
...+++++.. +..|-...+|++... .....|.+++...... .........|..+++.+...++ .++++.|.
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-v~~~~~~~ 113 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-VQLFYAFQ 113 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-CeEEEEEE
Confidence 3345555554 444666678888763 4567888888753210 0011112356666665544444 56777775
Q ss_pred C----eEEEEeecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 145 G----GRIEEYIPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 n----GrIEefi~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
. ..|.||++ |.+|.. ..+.. ..+..+|+..|+.+|+..+
T Consensus 114 ~~~~~~lv~Ey~~------gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 163 (371)
T cd05622 114 DDRYLYMVMEYMP------GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 163 (371)
T ss_pred cCCEEEEEEcCCC------CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 4 36888988 554421 11222 2356788999999998653
No 328
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=37.13 E-value=1.2e+02 Score=27.19 Aligned_cols=100 Identities=13% Similarity=0.148 Sum_probs=56.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|-...+|++... ..+..|++++.-.... ++...+-..|..+++.+. +..-.++++.|.. ..|.+
T Consensus 32 ~lg~G~~~~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 32 EIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred eeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEEEe
Confidence 4555555678888753 3457788887653320 011122335666666664 3334456776543 48889
Q ss_pred eecCCCCCccccCC-----CCCCCCh---HHHHHHHHHHHhhcCCC
Q psy15662 151 YIPDKETRKARSLK-----YSELTDP---AISRKIAEKMADIHLMQ 188 (256)
Q Consensus 151 fi~~~~~~~gr~Lt-----~~el~dp---~i~~~IA~~La~lH~~~ 188 (256)
|++ |..+. ...+... .+..+||..|+.+|...
T Consensus 106 ~~~------g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 145 (317)
T cd06635 106 YCL------GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN 145 (317)
T ss_pred CCC------CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 988 53211 1112222 25667899999999865
No 329
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=36.85 E-value=45 Score=28.97 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=55.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC-C---eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP-G---GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~-n---GrIEefi~ 153 (256)
+..|-...+|++... ..+..|.++.+.....+.....-.+|..+++.+...++ .++++.|. + ..|.||++
T Consensus 9 ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~lv~e~~~ 82 (286)
T cd06622 9 LGKGNYGSVYKVLHR-----PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-VDFYGAFFIEGAVYMCMEYMD 82 (286)
T ss_pred hcccCCeEEEEEEEc-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-HhhhhheecCCeEEEEEeecC
Confidence 445556678888763 34677888876543211122223357777766643333 45666553 2 36788888
Q ss_pred CCCCCccccCCC---C-----CCCC---hHHHHHHHHHHHhhcC
Q psy15662 154 DKETRKARSLKY---S-----ELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 154 ~~~~~~gr~Lt~---~-----el~d---p~i~~~IA~~La~lH~ 186 (256)
|.+|.. . .+.. ..+..+|+..|..+|.
T Consensus 83 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 120 (286)
T cd06622 83 ------AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE 120 (286)
T ss_pred ------CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 655431 1 2222 2355678888888985
No 330
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=36.76 E-value=2.6e+02 Score=24.20 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=56.5
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHh--cCCCCceeEeeC------C--
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSE--RKLGPTLHGVFP------G-- 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~--~glgPkl~g~F~------n-- 145 (256)
.+..|-.-.+|++.... .....|.+++.-....+ ........|..+++.|.. +.--.++++.|. +
T Consensus 8 ~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~ 83 (290)
T cd07862 8 EIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 83 (290)
T ss_pred EeccCCCeEEEEEEEcC----CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCc
Confidence 34445556788887531 23456777765433211 122344567777777653 333456777653 1
Q ss_pred -eEEEEeecCCCCCccccC------CCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 -GRIEEYIPDKETRKARSL------KYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 -GrIEefi~~~~~~~gr~L------t~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +.-. ....+.. -.+..+|+..|+-+|+..+
T Consensus 84 ~~lv~e~~~------~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i 131 (290)
T cd07862 84 LTLVFEHVD------QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV 131 (290)
T ss_pred EEEEEccCC------CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36777776 4210 0011211 2467889999999998653
No 331
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=36.71 E-value=1.2e+02 Score=31.92 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=57.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeec
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIP 153 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~ 153 (256)
+..|-.-.+|++... ..+..|.++..-... . ....|..+++.+. +.--.+++|++.. ..|.||++
T Consensus 698 ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~---~--~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv~Ey~~ 766 (968)
T PLN00113 698 ISRGKKGASYKGKSI-----KNGMQFVVKEINDVN---S--IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLIHEYIE 766 (968)
T ss_pred EccCCCeeEEEEEEC-----CCCcEEEEEEccCCc---c--ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEEEeCCC
Confidence 444556788988763 346778888764332 1 1234566666664 3344578888753 48999999
Q ss_pred CCCCCccccCCCC--CC---CChHHHHHHHHHHHhhcC
Q psy15662 154 DKETRKARSLKYS--EL---TDPAISRKIAEKMADIHL 186 (256)
Q Consensus 154 ~~~~~~gr~Lt~~--el---~dp~i~~~IA~~La~lH~ 186 (256)
+..|..- .+ ....+..+||+.|+-+|.
T Consensus 767 ------~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~ 798 (968)
T PLN00113 767 ------GKNLSEVLRNLSWERRRKIAIGIAKALRFLHC 798 (968)
T ss_pred ------CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhcc
Confidence 6554310 11 123577899999999994
No 332
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=35.16 E-value=1.7e+02 Score=25.88 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=57.1
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--C----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--G----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n----GrIEef 151 (256)
+..|-.-.+|++...+ ......|.++..-... ...+..+|..+++.+..-++- ++++.|. + ..+.+|
T Consensus 9 lG~G~~g~Vy~~~~~~---~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07868 9 VGRGTYGHVYKAKRKD---GKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVI-SLQKVFLSHADRKVWLLFDY 81 (317)
T ss_pred cccCCCeEEEEEEEcc---CCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCc-ceeeeEecCCCcEEEEEEec
Confidence 4445556788887532 2345678888765432 223445788888888665554 4566662 2 256677
Q ss_pred ecCCCCCccccCC-------------CCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLK-------------YSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt-------------~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
.+ +.-.. ...+.. -.+..+|+..|+-+|+..
T Consensus 82 ~~------~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ 128 (317)
T cd07868 82 AE------HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 128 (317)
T ss_pred cC------CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 66 32100 001111 246788999999999864
No 333
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=34.95 E-value=1.4e+02 Score=25.48 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=55.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----e------
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG----G------ 146 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----G------ 146 (256)
+..|-...+|++..... ......|.++++-.... +........|..+++.+..-+ -.++++.+.. +
T Consensus 7 ig~g~~g~v~~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 7 LGKGEFGSVREAQLKSE--DGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPN-VIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred ccCCCCCCEEeeEeecc--CCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCC-cceEEEEEccCCCCCcccceE
Confidence 34455678888876421 23457788987754320 011222335666666665333 3456776532 1
Q ss_pred EEEEeecCCCCCccccCCC-----------CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 147 RIEEYIPDKETRKARSLKY-----------SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 147 rIEefi~~~~~~~gr~Lt~-----------~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
.+.+|.+ +.+|.. ..+.. -.+..+|+..|+-+|...
T Consensus 84 ~~~~~~~------~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 133 (273)
T cd05074 84 VILPFMK------HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN 133 (273)
T ss_pred EEEecCC------CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4556666 333310 01222 346788899999999865
No 334
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=34.77 E-value=1.1e+02 Score=28.08 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=39.2
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC--C---eEEEEeec
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP--G---GRIEEYIP 153 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~--n---GrIEefi~ 153 (256)
.-|--..+|++....-......+.|.++++-..........-..|..++..+..+.--.++++.|. + ..+.+|++
T Consensus 16 G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~ 95 (337)
T cd05054 16 GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCK 95 (337)
T ss_pred ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCC
Confidence 334556777775321011233567889887543211112222357777777754433345666542 2 25678887
No 335
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=34.58 E-value=1.3e+02 Score=28.00 Aligned_cols=107 Identities=13% Similarity=0.140 Sum_probs=60.9
Q ss_pred ccceEE-eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC--
Q psy15662 71 TDSVIF-TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG-- 145 (256)
Q Consensus 71 ~~~~i~-~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n-- 145 (256)
+++++. .+..|-.-.+|++... ..+..|.++++-.... .........|..+++.+... .-.++++.|.+
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp-~iv~~~~~~~~~~ 116 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHK-----SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP-WVVQLFCAFQDDK 116 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCC-CEeeEEEEEEcCC
Confidence 444444 3555666778888863 4567888888743210 00111123466666655433 34467777754
Q ss_pred --eEEEEeecCCCCCccccCCC----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 --GRIEEYIPDKETRKARSLKY----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 --GrIEefi~~~~~~~gr~Lt~----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ |..|.. ..+.. ..+..+|+..|+.+|+..+
T Consensus 117 ~~~lv~Ey~~------gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~I 163 (370)
T cd05621 117 YLYMVMEYMP------GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 163 (370)
T ss_pred EEEEEEcCCC------CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 47888988 554421 11111 2356788999999998654
No 336
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=34.46 E-value=1.3e+02 Score=25.84 Aligned_cols=97 Identities=10% Similarity=0.123 Sum_probs=50.9
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETR 158 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~ 158 (256)
...+|+..... ......++++.............-.+|..+++.+...++ .++++.|.. ..+.||++
T Consensus 8 ~g~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~----- 78 (268)
T cd05086 8 FGKVLLSEIYT---DTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNI-LQCLGQCVEAIPYLLVFEYCE----- 78 (268)
T ss_pred CceEEEEEEEc---CCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcch-hheEEEecCCCccEEEEecCC-----
Confidence 34566654321 122345667765543310111122345555555544344 456776653 47888888
Q ss_pred ccccCCC---------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLKY---------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt~---------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.++.+||+.|+-+|...+
T Consensus 79 -~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 79 -LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred -CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 554421 11111 2456789999999998654
No 337
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=33.91 E-value=1.3e+02 Score=25.76 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=51.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC---------ccccccHHHHHHHHHHHHhcCCCCceeEeeCC---
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG---------ERALESIITDSVIFTLLSERKLGPTLHGVFPG--- 145 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~---------e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n--- 145 (256)
+..|--..+|++.... .....+.++.+..... +..+.+...|..++...-.+.--+++++.|..
T Consensus 8 ig~G~~~~v~~~~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 83 (269)
T cd08528 8 LGSGAFGCVYKVRKKN----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR 83 (269)
T ss_pred hcCCCCceEEEEEEcC----CCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence 3445556788887642 2346677776643220 00111122344433322223334456766542
Q ss_pred -eEEEEeecCCCCCccccCC---------CCCCCC---hHHHHHHHHHHHhhcC
Q psy15662 146 -GRIEEYIPDKETRKARSLK---------YSELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 146 -GrIEefi~~~~~~~gr~Lt---------~~el~d---p~i~~~IA~~La~lH~ 186 (256)
..|.||++ |.+|. ...+.. -.+..+||..|..+|.
T Consensus 84 ~~lv~e~~~------~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 131 (269)
T cd08528 84 LYIVMDLIE------GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK 131 (269)
T ss_pred EEEEEecCC------CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 47889998 66553 112222 2355688889999995
No 338
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=32.65 E-value=2.4e+02 Score=25.49 Aligned_cols=101 Identities=13% Similarity=0.101 Sum_probs=54.6
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-cc-ccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEE
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ER-ALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEE 150 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEe 150 (256)
.+..|--..+|++... .....|.+++.-.... .. .......|..++..+. +..-.++++.|.. ..|.|
T Consensus 8 ~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 8 VIGRGAFGEVAVVKMK-----HTERIYAMKILNKWEMLKRAETACFREERNVLVNGD-CQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred EEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEEe
Confidence 3444555677888763 3567788998753210 00 0111223444444333 3333456666653 47888
Q ss_pred eecCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|++ |..|.. ..+.. -.+..+|+..|+-+|...+
T Consensus 82 y~~------gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i 123 (331)
T cd05624 82 YYV------GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY 123 (331)
T ss_pred CCC------CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 988 554431 11221 1245688888999997543
No 339
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=32.15 E-value=1.4e+02 Score=26.79 Aligned_cols=95 Identities=14% Similarity=0.149 Sum_probs=50.1
Q ss_pred ccceeEEEeecCCCCCCCceEEEEecCCCCCc--cccccHHHHHH-HHHHHHhcCCCCceeEeeCC----eEEEEeecCC
Q psy15662 83 TNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE--RALESIITDSV-IFTLLSERKLGPTLHGVFPG----GRIEEYIPDK 155 (256)
Q Consensus 83 TN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e--~~~idR~~E~~-i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~ 155 (256)
-..+|++... .....|.++++...... ........|.. +++.+. +..-.++++.|.. ..|.||++
T Consensus 8 fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~-- 79 (325)
T cd05602 8 FGKVLLARHK-----AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYIN-- 79 (325)
T ss_pred CeEEEEEEEC-----CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCC--
Confidence 3467888753 34577888887643200 00011112222 222232 3333457777653 47888998
Q ss_pred CCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|..|.. ..+.. ..+..+|++.|+.+|...+
T Consensus 80 ----~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi 117 (325)
T cd05602 80 ----GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI 117 (325)
T ss_pred ----CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 554421 11222 2356789999999998654
No 340
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=32.14 E-value=1.5e+02 Score=25.66 Aligned_cols=82 Identities=17% Similarity=0.241 Sum_probs=45.9
Q ss_pred CceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEeecCCCCCccccCCC------CCCC
Q psy15662 100 PSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYIPDKETRKARSLKY------SELT 169 (256)
Q Consensus 100 ~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi~~~~~~~gr~Lt~------~el~ 169 (256)
...|+++++..... ........|..++..+. +.--.++++++. ...|.||.+ +.+|.. ..+.
T Consensus 32 ~~~v~~k~~~~~~~-~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~------~~~l~~~~~~~~~~~~ 103 (262)
T cd05077 32 EIKVILKVLDPSHR-DISLAFFETASMMRQVS-HKHIVLLYGVCVRDVENIMVEEFVE------FGPLDLFMHRKSDVLT 103 (262)
T ss_pred ceeEEEeecChhhh-hHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCCEEEEeccc------CCCHHHHHHhcCCCCC
Confidence 34688888776541 11112233444444443 223345777654 358888988 544321 1122
Q ss_pred C---hHHHHHHHHHHHhhcCCCC
Q psy15662 170 D---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 170 d---p~i~~~IA~~La~lH~~~i 189 (256)
. -.+..+||+.|+-+|+..+
T Consensus 104 ~~~~~~i~~qi~~~l~~lH~~~i 126 (262)
T cd05077 104 TPWKFKVAKQLASALSYLEDKDL 126 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhhCCe
Confidence 2 2467889999999998653
No 341
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=31.50 E-value=1e+02 Score=26.85 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=57.5
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC------eEEEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG------GRIEE 150 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n------GrIEe 150 (256)
+..|-...+|++... .....+.++.+...... .......+|..++..+..-++ +++++.+.+ ..|.|
T Consensus 13 lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 13 IEEGTYGVVYRARDK-----KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI-VTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hcCCCCeEEEEEEEC-----CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE-EEEEEEEEecCCCcEEEEeh
Confidence 344556678888763 34567888777543211 122233468778777764444 456665532 37778
Q ss_pred eecCCCCCccccC----C--CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 151 YIPDKETRKARSL----K--YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 151 fi~~~~~~~gr~L----t--~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|++ + +| . ...+..+ .+..+|+..|+.+|...+
T Consensus 87 ~~~------~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 127 (293)
T cd07843 87 YVE------H-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI 127 (293)
T ss_pred hcC------c-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 887 4 21 1 1112222 467789999999998653
No 342
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=30.58 E-value=2.1e+02 Score=24.81 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=50.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCe---EEEEeecC
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGG---RIEEYIPD 154 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nG---rIEefi~~ 154 (256)
+..|-...+|++...... ......+.++..........+.....|..++..+..-+ -.++++++.++ .|.+|.+
T Consensus 15 lg~G~~~~vy~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~-iv~~~~~~~~~~~~~i~e~~~- 91 (279)
T cd05111 15 LGSGVFGTVHKGIWIPEG-DSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAY-IVRLLGICPGASLQLVTQLSP- 91 (279)
T ss_pred cCccCCcceEEEEEcCCC-CceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCC-cceEEEEECCCccEEEEEeCC-
Confidence 333444568888763210 11112577777654331001111112222222222222 23577777654 6778888
Q ss_pred CCCCccccCC------CCCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 155 KETRKARSLK------YSELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 155 ~~~~~gr~Lt------~~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
+-+|. ...+.. -.+..+||..|+-+|...
T Consensus 92 -----~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T cd05111 92 -----LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR 129 (279)
T ss_pred -----CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44443 111222 236778999999999865
No 343
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=30.25 E-value=32 Score=28.50 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=17.1
Q ss_pred EEEEeccceeeeeEEEEecC
Q psy15662 23 CVKRMSGGLTNMLYHVTLLQ 42 (256)
Q Consensus 23 ~v~~isggltN~l~~v~~~~ 42 (256)
.++++++|.+|.+|.|+..+
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~ 21 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGG 21 (223)
T ss_pred cceecCCCccceEEEEEecC
Confidence 57889999999999998754
No 344
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=28.59 E-value=87 Score=26.81 Aligned_cols=99 Identities=18% Similarity=0.164 Sum_probs=56.9
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
+..|....+|++... .....|++|++-..... ........|..+++.+...++ .++++.+.. ..|.+|.
T Consensus 7 ig~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 7 LGEGTYGVVYKARDK-----KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI-VKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred ccccCcceEEEeeec-----CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCH-HHHHhhhhcCCceEEEecCc
Confidence 334556678888763 34688999998765311 122234467777777654444 345555443 3566666
Q ss_pred cCCCCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+ + +|.. ..+.. -.+..+|+..|+.+|...+
T Consensus 81 ~------~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (282)
T cd07829 81 D------M-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRI 119 (282)
T ss_pred C------c-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 5 3 2210 11222 2366788899999998654
No 345
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=28.40 E-value=2.9e+02 Score=25.07 Aligned_cols=102 Identities=11% Similarity=0.127 Sum_probs=57.0
Q ss_pred EEeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcccc-ccHHHHHHHHHHHHhcCCCCceeEeeCC--------
Q psy15662 75 IFTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERAL-ESIITDSVIFTLLSERKLGPTLHGVFPG-------- 145 (256)
Q Consensus 75 i~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~-idR~~E~~i~~~Ls~~glgPkl~g~F~n-------- 145 (256)
+..+..|-...+|++... ..+..|.++++-........ ..-..|..+++.+...++- ++++.|..
T Consensus 20 ~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv-~~~~~~~~~~~~~~~~ 93 (343)
T cd07880 20 LKQVGSGAYGTVCSALDR-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVI-GLLDVFTPDLSLDRFH 93 (343)
T ss_pred EEEeeecCCeEEEEEEEC-----CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcc-ceeeeecCCccccccc
Confidence 345556666778888653 34677888876432210111 1223677888877655554 46666642
Q ss_pred --eEEEEeecCCCCCccccC----CCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 --GRIEEYIPDKETRKARSL----KYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 --GrIEefi~~~~~~~gr~L----t~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.+|+. + .| ....+.. ..+..+|++.|+.+|...+
T Consensus 94 ~~~lv~e~~~------~-~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi 139 (343)
T cd07880 94 DFYLVMPFMG------T-DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGI 139 (343)
T ss_pred eEEEEEecCC------C-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 24555553 2 11 1111222 2366788999999998653
No 346
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=28.20 E-value=1.8e+02 Score=29.82 Aligned_cols=99 Identities=9% Similarity=0.071 Sum_probs=57.0
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEe
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEY 151 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEef 151 (256)
+.-|---.+|++... .....|.++++-.... .........|..+++.+.. ..-.++++.|.. ..|.||
T Consensus 12 LG~G~fg~Vy~a~~~-----~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~~~lVmEy 85 (669)
T cd05610 12 ISRGAFGKVYLGRKK-----NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS-PFIVHLYYSLQSANNVYLVMEY 85 (669)
T ss_pred EecCCCeEEEEEEEC-----CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC-CCcCeEEEEEEECCEEEEEEeC
Confidence 333444578888763 3567899998754320 0111223346666665543 334567776653 378888
Q ss_pred ecCCCCCccccCCC-----CCCCC---hHHHHHHHHHHHhhcCCC
Q psy15662 152 IPDKETRKARSLKY-----SELTD---PAISRKIAEKMADIHLMQ 188 (256)
Q Consensus 152 i~~~~~~~gr~Lt~-----~el~d---p~i~~~IA~~La~lH~~~ 188 (256)
++ |.+|.. .-+.. -.+..+|+..|+.+|...
T Consensus 86 ~~------g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 86 LI------GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred CC------CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 88 654421 01111 346678888899999864
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=28.10 E-value=77 Score=27.07 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=43.4
Q ss_pred ceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC-----------
Q psy15662 101 SEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY----------- 165 (256)
Q Consensus 101 ~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~----------- 165 (256)
..+.++.+-....++....-..|..+++.+..-++- +++++|.. ..|.+|++ +.+|..
T Consensus 27 ~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~~v~e~~~------~~~L~~~l~~~~~~~~~ 99 (269)
T cd05044 27 IRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV-KLLGVCLLNEPQYIIMELME------GGDLLSYLRDARVERFG 99 (269)
T ss_pred eeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCee-eEeeeecCCCCeEEEEeccC------CCcHHHHHHHhhhcccC
Confidence 456666654332111222233566666666443343 45666532 47778887 555431
Q ss_pred -CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 166 -SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 166 -~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..+.- ..+..+|+..|+.+|...+
T Consensus 100 ~~~~~~~~~~~~~~~l~~~l~~lH~~~i 127 (269)
T cd05044 100 PPLLTLKELLDICLDVAKGCVYLEQMHF 127 (269)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence 01111 1256688888899998653
No 348
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=27.89 E-value=63 Score=28.24 Aligned_cols=83 Identities=14% Similarity=0.276 Sum_probs=49.8
Q ss_pred CCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeC----CeEEEEeecCCCCCccccCCCC------CC
Q psy15662 99 EPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFP----GGRIEEYIPDKETRKARSLKYS------EL 168 (256)
Q Consensus 99 ~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~----nGrIEefi~~~~~~~gr~Lt~~------el 168 (256)
....|+++++..... ........|..+++.++.-++. +++|++. ...|.||++ +.+|..- .+
T Consensus 43 ~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv-~~~~~~~~~~~~~lv~ey~~------~g~L~~~l~~~~~~~ 114 (274)
T cd05076 43 RELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLA-FVHGVCVRGSENIMVEEFVE------HGPLDVCLRKEKGRV 114 (274)
T ss_pred eeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCee-eEEEEEEeCCceEEEEecCC------CCcHHHHHHhcCCCC
Confidence 345688888865441 1222333455566666555554 5777764 258899999 5555311 11
Q ss_pred CC---hHHHHHHHHHHHhhcCCCC
Q psy15662 169 TD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 169 ~d---p~i~~~IA~~La~lH~~~i 189 (256)
.. -.+..+||+.|+-+|...+
T Consensus 115 ~~~~~~~i~~qi~~~l~~lH~~~i 138 (274)
T cd05076 115 PVAWKITVAQQLASALSYLEDKNL 138 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCc
Confidence 11 2367789999999998654
No 349
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=27.85 E-value=3.8e+02 Score=24.03 Aligned_cols=102 Identities=18% Similarity=0.155 Sum_probs=54.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcc-ccccHHHHHHHHHHHHhcCCCCceeEeeC---C-----eEE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGER-ALESIITDSVIFTLLSERKLGPTLHGVFP---G-----GRI 148 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~-~~idR~~E~~i~~~Ls~~glgPkl~g~F~---n-----GrI 148 (256)
+..|--..+|++.... ......|.++..-...... ....-..|..+++.+.++.--+++++.+. . ..+
T Consensus 8 lg~G~~g~vy~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 8 LGQGAYGIVCSARNAE---TSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred ccccCCeEEEEEEeCC---CCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 3345556788888642 1125678888764322001 11122457777777765555556766421 1 244
Q ss_pred EEeecCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 149 EEYIPDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 149 Eefi~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
++|.. + .|. ..-+.. -.+..+|+..|+.+|...+
T Consensus 85 ~e~~~------~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi 126 (332)
T cd07857 85 EELME------A-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANV 126 (332)
T ss_pred Eeccc------C-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 55554 2 111 011112 2366789999999998664
No 350
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=27.56 E-value=3.6e+02 Score=24.13 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=54.4
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETR 158 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~ 158 (256)
..+|.+... ..+..|.+++....... .....-..|..+.+.+...++ .+++++|.. ..|.+|++
T Consensus 14 ~~v~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-v~~~~~~~~~~~~~~v~e~~~----- 82 (328)
T cd08226 14 TSVYLARHT-----PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNI-MTSWTVFTTGSWLWVISPFMA----- 82 (328)
T ss_pred eeEEEEEEc-----CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-ceEeeeEecCCceEEEEeccc-----
Confidence 356777652 45688999997643211 111222345555555544343 578888853 36788887
Q ss_pred ccccCC-------CCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLK-------YSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt-------~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+-+|. ...+..+ .+..+||..|+-+|+..+
T Consensus 83 -~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i 122 (328)
T cd08226 83 -YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY 122 (328)
T ss_pred -CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 43322 1122222 467789999999998653
No 351
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=27.44 E-value=3.6e+02 Score=22.82 Aligned_cols=98 Identities=13% Similarity=0.217 Sum_probs=55.4
Q ss_pred cCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-----cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEE
Q psy15662 79 LGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-----RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIE 149 (256)
Q Consensus 79 ~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-----~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIE 149 (256)
..|--..+|++.. ..+..+.+++.-..... ........|..+++.+..-++ +++++.|.. ..+.
T Consensus 9 g~g~~~~v~~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 9 GKGAYGTVYCGLT------NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-VQYLGTCLDDNTISIFM 81 (265)
T ss_pred eccCCeEEEEEEE------cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-eeEeeEeecCCeEEEEE
Confidence 3455567788764 23567888865433210 011112346666666654343 467777643 4788
Q ss_pred EeecCCCCCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 150 EYIPDKETRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 150 efi~~~~~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
||++ |.+|.. ..+..+ .+..+|+..|+.+|...+
T Consensus 82 e~~~------~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (265)
T cd06631 82 EFVP------GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCV 123 (265)
T ss_pred ecCC------CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 8888 554431 112222 356788999999998654
No 352
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=27.12 E-value=76 Score=26.98 Aligned_cols=100 Identities=15% Similarity=0.228 Sum_probs=53.3
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEee--CC---eEEEEeecCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVF--PG---GRIEEYIPDK 155 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F--~n---GrIEefi~~~ 155 (256)
|--..+|++...+. ......+.++................|..+++.+...++-+ +++.+ .+ ..+.+|.+
T Consensus 6 g~~g~v~~~~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~-~~~~~~~~~~~~~lv~e~~~-- 80 (262)
T cd05058 6 GHFGCVYHGTLIDS--DGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS-LLGICLPSEGSPLVVLPYMK-- 80 (262)
T ss_pred cCCceEEEEEEecC--CCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcce-EEEEeecCCCCcEEEEecCC--
Confidence 33356787775421 12345677777643321012223345666666665555543 56643 23 36777877
Q ss_pred CCCccccCCC------CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 156 ETRKARSLKY------SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 156 ~~~~gr~Lt~------~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+.. -.+..+||..|+-+|...+
T Consensus 81 ----~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 119 (262)
T cd05058 81 ----HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF 119 (262)
T ss_pred ----CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 444421 11111 2345689999999998653
No 353
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=26.38 E-value=1.9e+02 Score=24.83 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=54.8
Q ss_pred cceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEe-eCC----eEEEEeecCCCCC
Q psy15662 84 NMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGV-FPG----GRIEEYIPDKETR 158 (256)
Q Consensus 84 N~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~-F~n----GrIEefi~~~~~~ 158 (256)
-.+|++....+. ......|++++.-.............|..+++.+...++-+ ++++ +.. ..+.+|.+
T Consensus 20 g~V~~~~~~~~~-~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~-~~~~~~~~~~~~~~~~~~~~----- 92 (280)
T cd05043 20 GRIFYGILIDEK-PGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILP-ILHVCIEDGEPPFVLYPYMN----- 92 (280)
T ss_pred ceEEEEEEecCC-CCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCe-EEEEEecCCCCCEEEEEcCC-----
Confidence 467888764311 12356778887654431112223346777777776666655 5554 432 35666666
Q ss_pred ccccCCC-------------CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 159 KARSLKY-------------SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 159 ~gr~Lt~-------------~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
+.+|.. ..+... .+..+|+..|+-+|...+
T Consensus 93 -~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i 138 (280)
T cd05043 93 -WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV 138 (280)
T ss_pred -CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 333311 123332 366789999999998653
No 354
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=26.32 E-value=2.8e+02 Score=24.60 Aligned_cols=100 Identities=12% Similarity=0.148 Sum_probs=56.3
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC---------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG---------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---------Gr 147 (256)
+..|-...+|++... ..+..|.+|.+...... .....-..|..+++.+...++- ++++.|.. ..
T Consensus 8 ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~-~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 8 IGSGAYGVVCSAVDK-----RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENII-GLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ecCCCCeEEEEEEeC-----CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchh-hhhhhhcccCcccccceEE
Confidence 444556678888863 34678999988654310 1112233577777777543332 34444421 35
Q ss_pred EEEeecCCCCCccc---cCCC-CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKAR---SLKY-SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr---~Lt~-~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|++ +. .+.. ..+..+ .+..+|+..|+.+|...+
T Consensus 82 v~e~~~------~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi 124 (330)
T cd07834 82 VTELME------TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANV 124 (330)
T ss_pred Eecchh------hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 666666 31 1111 112222 367789999999998764
No 355
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=25.91 E-value=1.9e+02 Score=26.21 Aligned_cols=102 Identities=12% Similarity=0.122 Sum_probs=58.0
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC---------
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG--------- 145 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n--------- 145 (256)
..+..|-...+|++... .....|.+++......+ .....-.+|..+++.+...++- ++++.|..
T Consensus 23 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~ 96 (355)
T cd07874 23 KPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-SLLNVFTPQKSLEEFQD 96 (355)
T ss_pred EEeeecCCEEEEEEEec-----CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchh-ceeeeeeccccccccce
Confidence 34555556678887652 34677888877543211 1122223577777777655554 36666531
Q ss_pred -eEEEEeecCCCCCccccCCC--CCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 -GRIEEYIPDKETRKARSLKY--SELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 -GrIEefi~~~~~~~gr~Lt~--~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +..+.. ..+.. ..+..+|+..|+.+|...+
T Consensus 97 ~~lv~e~~~------~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi 140 (355)
T cd07874 97 VYLVMELMD------ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140 (355)
T ss_pred eEEEhhhhc------ccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36777777 432110 11221 2367789999999998643
No 356
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=25.81 E-value=1.1e+02 Score=27.41 Aligned_cols=93 Identities=11% Similarity=0.116 Sum_probs=53.3
Q ss_pred ceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCc
Q psy15662 85 MLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRK 159 (256)
Q Consensus 85 ~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~ 159 (256)
..|++.. ..++..|.++........ ........|..+++.+..-++- ++++.|.. ..|.+|++
T Consensus 15 ~v~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv-~~~~~~~~~~~~~lv~e~~~------ 82 (327)
T cd08227 15 TVNLARY-----KPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIV-PYRATFIADNELWVVTSFMA------ 82 (327)
T ss_pred EEEEEee-----cccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCee-eEEEEEEECCEEEEEEeccC------
Confidence 4566654 345678888887543211 1111223577777777554443 46777642 36788888
Q ss_pred cccCC-------CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 160 ARSLK-------YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 160 gr~Lt-------~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
+.+|. ...+.. -.+..+||..|+-+|...+
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 122 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY 122 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 44332 111222 2366788899999998653
No 357
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=24.06 E-value=1.2e+02 Score=27.79 Aligned_cols=75 Identities=19% Similarity=0.144 Sum_probs=55.7
Q ss_pred CccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCCeEEEEeecCCCCCc
Q psy15662 80 GGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPGGRIEEYIPDKETRK 159 (256)
Q Consensus 80 GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~nGrIEefi~~~~~~~ 159 (256)
+++||..|++.-. .....++.|++|+++ ..++.|..+-.+..+..+.+. |+++-.+. +. +
T Consensus 2 ~~~~~~~~~~~~~-----~g~t~~~~~~~~~g~--~~~~~r~~~p~~~~~~~~~~~-~~l~~~~~-------~~-----~ 61 (269)
T COG0510 2 DSLTNPSWKITPL-----NGLTGYAFRIEGEGT--RVFLKRNFEPFLPALIFRLIV-PKLLWLKR-------IA-----N 61 (269)
T ss_pred Cccccccceeeec-----cCCcceeEEeeCCCC--eeeeecCCCcchHHHHHHhhh-hhhhhhcc-------cc-----c
Confidence 5789999966532 235778999999998 799999999888888888888 99988887 22 2
Q ss_pred cccCCCCCCCChHHH
Q psy15662 160 ARSLKYSELTDPAIS 174 (256)
Q Consensus 160 gr~Lt~~el~dp~i~ 174 (256)
|..+....+.+..+.
T Consensus 62 ~~~~~~q~~~~~~~l 76 (269)
T COG0510 62 GGVLVAQYWENGRTL 76 (269)
T ss_pred CCceEEeeecccccc
Confidence 556665666555443
No 358
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=23.93 E-value=2.6e+02 Score=25.41 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=57.7
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeC----------
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFP---------- 144 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---------- 144 (256)
..+..|---.+|++... ..+..|.++++...... ........|..+++.+...++ .++++.|.
T Consensus 27 ~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~ 100 (359)
T cd07876 27 KPIGSGAQGIVCAAFDT-----VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI-ISLLNVFTPQKSLEEFQD 100 (359)
T ss_pred EEeecCCCEEEEEEEEc-----CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCE-eeeeeeeccCCCccccce
Confidence 34445555677888753 34678888887543210 112222356677666653333 34666653
Q ss_pred CeEEEEeecCCCCCccccCCC--CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 145 GGRIEEYIPDKETRKARSLKY--SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 nGrIEefi~~~~~~~gr~Lt~--~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
-..|.+|++ +..+.. ..+... .+..+|+..|+.+|...+
T Consensus 101 ~~lv~e~~~------~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 101 VYLVMELMD------ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred eEEEEeCCC------cCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 147788887 432211 112222 367789999999998653
No 359
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=23.89 E-value=2.2e+02 Score=25.03 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCC-CccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC-------C
Q psy15662 99 EPSEVLLRIYGQTH-GERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY-------S 166 (256)
Q Consensus 99 ~~~~vLlRIyG~~t-~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~-------~ 166 (256)
....|.++++.... ..+....-..|..+++.+...++-+ +++.|.. ..+.+|++ +.+|.. .
T Consensus 24 ~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~-~~~~~~~~~~~~~~~e~~~------~~~l~~~l~~~~~~ 96 (314)
T cd08216 24 TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILP-YVTSFIVDSELYVVSPLMA------YGSCEDLLKTHFPE 96 (314)
T ss_pred CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhh-hhheeecCCeEEEEEeccC------CCCHHHHHHHhccc
Confidence 56788888875431 1122223346777777776555544 5666543 36677777 443321 1
Q ss_pred CCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 167 ELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 167 el~d---p~i~~~IA~~La~lH~~~i 189 (256)
.+.. ..+..+|+..|+-+|...+
T Consensus 97 ~~~~~~~~~~~~~l~~~L~~LH~~~i 122 (314)
T cd08216 97 GLPELAIAFILKDVLNALDYIHSKGF 122 (314)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 1222 2366788889999998654
No 360
>PLN02756 S-methyl-5-thioribose kinase
Probab=23.63 E-value=70 Score=31.60 Aligned_cols=22 Identities=27% Similarity=0.430 Sum_probs=19.6
Q ss_pred CcEEEEEeccceeeeeEEEEec
Q psy15662 20 KDICVKRMSGGLTNMLYHVTLL 41 (256)
Q Consensus 20 ~~i~v~~isggltN~l~~v~~~ 41 (256)
..+.++.|+||-+|.+|.|+.+
T Consensus 33 ~~l~~~eiggGn~N~VyrV~~~ 54 (418)
T PLN02756 33 DDLKIKEVGDGNLNFVYIVVSS 54 (418)
T ss_pred CCceEEEcCCCceeeEEEEEcC
Confidence 5679999999999999999864
No 361
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=23.60 E-value=2.4e+02 Score=25.27 Aligned_cols=94 Identities=12% Similarity=0.093 Sum_probs=52.7
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCC--ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG--ERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPD 154 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~--e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~ 154 (256)
|-.-.+|++... ..+..|.++++-.... .........|..+++.+.. ..-+++++.|.. ..|.||++
T Consensus 6 G~~g~V~~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h-p~i~~~~~~~~~~~~~~lv~E~~~- 78 (325)
T cd05594 6 GTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYAN- 78 (325)
T ss_pred CCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCCceEEEEEcCCEEEEEEeCCC-
Confidence 444567777653 3567888888754320 0111222345555554433 334567777753 47889998
Q ss_pred CCCCccccCC----CC-CCCC---hHHHHHHHHHHHhhcC
Q psy15662 155 KETRKARSLK----YS-ELTD---PAISRKIAEKMADIHL 186 (256)
Q Consensus 155 ~~~~~gr~Lt----~~-el~d---p~i~~~IA~~La~lH~ 186 (256)
+..|. .. -+.. ..+..+||..|+-+|+
T Consensus 79 -----~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~ 113 (325)
T cd05594 79 -----GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 113 (325)
T ss_pred -----CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 54442 11 1222 2356789999999996
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=23.23 E-value=52 Score=29.97 Aligned_cols=101 Identities=13% Similarity=0.109 Sum_probs=54.6
Q ss_pred EeecCccccceeEEEeecCCCCCCCceEEEEecCCCCCcccccc-HHHHHHHHHHHHhcCCCCceeEeeC----------
Q psy15662 76 FTLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALES-IITDSVIFTLLSERKLGPTLHGVFP---------- 144 (256)
Q Consensus 76 ~~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~id-R~~E~~i~~~Ls~~glgPkl~g~F~---------- 144 (256)
..+..|-...+|++... .....|++|+............ -..|..+++.+...++-+ +++.|.
T Consensus 21 ~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~-~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 21 SPVGSGAYGQVCSAFDT-----KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIG-LLDVFTPASSLEDFQD 94 (343)
T ss_pred EEeccCCceEEEEEEEC-----CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHH-HHHHhhcccccccccc
Confidence 34455666788988763 3467899998764321001111 124777776664444322 333331
Q ss_pred CeEEEEeecCCCCCccccCC----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 145 GGRIEEYIPDKETRKARSLK----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 145 nGrIEefi~~~~~~~gr~Lt----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
-..|++|+. + .|. ...+.. -.+..+|++.|+.+|...+
T Consensus 95 ~~lv~e~~~------~-~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi 139 (343)
T cd07851 95 VYLVTHLMG------A-DLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGI 139 (343)
T ss_pred EEEEEecCC------C-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 246666665 3 221 111222 2366788999999998653
No 363
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=22.82 E-value=2.9e+02 Score=25.17 Aligned_cols=101 Identities=12% Similarity=0.121 Sum_probs=57.0
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC----------
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG---------- 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---------- 145 (256)
.+..|-.-.+|++... .....|.+++....... .....-..|..+++.+...++- ++++.|..
T Consensus 31 ~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii-~~~~~~~~~~~~~~~~~~ 104 (364)
T cd07875 31 PIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-GLLNVFTPQKSLEEFQDV 104 (364)
T ss_pred EeecCCCeEEEEEEEC-----CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCcc-ccceeecccccccccCeE
Confidence 3444555667887753 34677888887643210 1112223577777776554444 35555531
Q ss_pred eEEEEeecCCCCCccccCC--CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 GRIEEYIPDKETRKARSLK--YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 GrIEefi~~~~~~~gr~Lt--~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +..+. ...+.. ..+..+|++.|+.+|...+
T Consensus 105 ~lv~e~~~------~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 147 (364)
T cd07875 105 YIVMELMD------ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 147 (364)
T ss_pred EEEEeCCC------CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 47888888 43211 011222 2367889999999998543
No 364
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=22.49 E-value=77 Score=27.13 Aligned_cols=80 Identities=21% Similarity=0.294 Sum_probs=46.5
Q ss_pred ceEEEEecCCCCCccccc-cHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCCCCccccCCC------CCCC
Q psy15662 101 SEVLLRIYGQTHGERALE-SIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKETRKARSLKY------SELT 169 (256)
Q Consensus 101 ~~vLlRIyG~~t~e~~~i-dR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~~~~gr~Lt~------~el~ 169 (256)
..+++++..... .... ....|..+++.+..-++ .++++.|.. ..|.||++ +-+|.. ..+.
T Consensus 28 ~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~i-v~~~~~~~~~~~~~lv~e~~~------~g~L~~~l~~~~~~~~ 98 (258)
T cd05078 28 TEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHL-VLNYGVCVCGDESIMVQEYVK------FGSLDTYLKKNKNLIN 98 (258)
T ss_pred chhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCCh-hheeeEEEeCCCcEEEEecCC------CCcHHHHHhcCCCCCC
Confidence 346666665433 1222 22446666666654343 467877753 48888888 544421 1122
Q ss_pred C---hHHHHHHHHHHHhhcCCCC
Q psy15662 170 D---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 170 d---p~i~~~IA~~La~lH~~~i 189 (256)
. -.+..+||..|+-+|...+
T Consensus 99 ~~~~~~~~~qi~~~l~~lH~~~i 121 (258)
T cd05078 99 ISWKLEVAKQLAWALHFLEDKGL 121 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCe
Confidence 2 2356899999999998654
No 365
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=22.22 E-value=52 Score=29.32 Aligned_cols=21 Identities=29% Similarity=0.420 Sum_probs=17.6
Q ss_pred EEEEEeccceeeeeEEEEecC
Q psy15662 22 ICVKRMSGGLTNMLYHVTLLQ 42 (256)
Q Consensus 22 i~v~~isggltN~l~~v~~~~ 42 (256)
..++.+.||++|.+|.|....
T Consensus 17 ~~i~~i~~G~~n~~y~v~~~~ 37 (296)
T cd05153 17 LSFEGISAGIENTNYFVTTDS 37 (296)
T ss_pred hheecccCccccceEEEEeCC
Confidence 458899999999999987643
No 366
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=22.14 E-value=3.7e+02 Score=24.28 Aligned_cols=101 Identities=11% Similarity=0.105 Sum_probs=55.9
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeCC----------
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFPG---------- 145 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---------- 145 (256)
.+.-|-...+|++... ..+..|.+|....... +....+-..|..+++.+...++- ++++.|..
T Consensus 22 ~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~ 95 (342)
T cd07879 22 QVGSGAYGSVCSAIDK-----RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI-GLLDVFTSAVSGDEFQDF 95 (342)
T ss_pred EeeecCCeEEEEEEeC-----CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCcc-chhheecccccCCCCceE
Confidence 3433455677887652 3467888887654221 11122234677888777655554 46776642
Q ss_pred eEEEEeecCCCCCccc--cCCCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 GRIEEYIPDKETRKAR--SLKYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 GrIEefi~~~~~~~gr--~Lt~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..+.+|++ .. .+....+.. ..+..+|++.|+-+|...+
T Consensus 96 ~lv~e~~~------~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 138 (342)
T cd07879 96 YLVMPYMQ------TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGI 138 (342)
T ss_pred EEEecccc------cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 35556665 21 100011111 2366789999999998653
No 367
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=22.05 E-value=2e+02 Score=24.40 Aligned_cols=91 Identities=10% Similarity=0.017 Sum_probs=49.1
Q ss_pred ccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEeecCCC
Q psy15662 81 GLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYIPDKE 156 (256)
Q Consensus 81 GlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi~~~~ 156 (256)
|.-..+|.|... ..+..|+++.+-... ..++ |...... ..+.--+++++.|.+ -.|.||++
T Consensus 4 g~~~~v~~~~~~-----~~~~~~~~K~i~~~~----~~~~--~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~--- 68 (237)
T cd05576 4 GVIDKVLLVMDT-----RTQQTFILKGLRKSS----EYSR--ERLTIIP-HCVPNMVCLHKYIVSEDSVFLVLQHAE--- 68 (237)
T ss_pred cccceEEEEEEc-----cCCcEEEEEeecchh----hhhh--HHHHHHh-cCCCceeehhhheecCCeEEEEEecCC---
Confidence 444557777753 456789999875433 1122 2211111 112233456666543 37888998
Q ss_pred CCccccCCC-----CCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 157 TRKARSLKY-----SELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 157 ~~~gr~Lt~-----~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|.. ..+..+ .+..+++..|..+|...+
T Consensus 69 ---~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 106 (237)
T cd05576 69 ---GGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGI 106 (237)
T ss_pred ---CCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 555421 112222 355678888899998654
No 368
>PTZ00036 glycogen synthase kinase; Provisional
Probab=21.75 E-value=4.7e+02 Score=25.08 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=57.1
Q ss_pred cceEEe-ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC-----
Q psy15662 72 DSVIFT-LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----- 145 (256)
Q Consensus 72 ~~~i~~-l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----- 145 (256)
.+.+.. +.-|---.+|++... ..+..|.++..-... . ....|..+++.|...++- +++++|-.
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~---~--~~~~Ei~il~~l~h~niv-~l~~~~~~~~~~~ 135 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICI-----DTSEKVAIKKVLQDP---Q--YKNRELLIMKNLNHINII-FLKDYYYTECFKK 135 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEecCc---c--hHHHHHHHHHhcCCCCCc-ceeeeEeeccccc
Confidence 344433 334555678888763 345678887654332 1 234688888888655544 35554421
Q ss_pred -------eEEEEeecCCCCCccccC--------CCCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 146 -------GRIEEYIPDKETRKARSL--------KYSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 146 -------GrIEefi~~~~~~~gr~L--------t~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
..|.||++ +... ....+.. -.+..+|+..|+-+|+..+
T Consensus 136 ~~~~~~l~lvmE~~~------~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I 191 (440)
T PTZ00036 136 NEKNIFLNVVMEFIP------QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI 191 (440)
T ss_pred CCCceEEEEEEecCC------ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 15788888 4211 0111211 1345689999999998653
No 369
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=21.21 E-value=3.9e+02 Score=23.65 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=54.6
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCC-ccccccHHHHHHHHHHHHhcCCCCceeEeeC---------CeE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHG-ERALESIITDSVIFTLLSERKLGPTLHGVFP---------GGR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~-e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~---------nGr 147 (256)
+..|-...+|++... ..+..|.++....... .........|..+++.|...++- ++++++. -..
T Consensus 8 lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv-~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 8 IGKGSYGVVCSAIDT-----HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIV-EIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred EeecCCeEEEEEEEC-----CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEe-eecceEeccCCCCCceEEE
Confidence 333445567887753 4567888887653220 01122234677777777544433 3444431 146
Q ss_pred EEEeecCCCCCccccCC----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSLK----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~Lt----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
|.||++ +.-.. ...+.. ..+..+||+.|+-+|+..+
T Consensus 82 v~e~~~------~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 124 (338)
T cd07859 82 VFELME------SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANV 124 (338)
T ss_pred EEecCC------CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 777776 32110 011222 2367789999999998654
No 370
>COG4004 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.11 E-value=3e+02 Score=21.83 Aligned_cols=56 Identities=25% Similarity=0.246 Sum_probs=37.2
Q ss_pred HHHHHHHhcCC-----CCceeEeeCCe-EEEEeecCCCCCccc-cCCCCCCCChHHHHHHHHHHHhhc
Q psy15662 125 VIFTLLSERKL-----GPTLHGVFPGG-RIEEYIPDKETRKAR-SLKYSELTDPAISRKIAEKMADIH 185 (256)
Q Consensus 125 ~i~~~Ls~~gl-----gPkl~g~F~nG-rIEefi~~~~~~~gr-~Lt~~el~dp~i~~~IA~~La~lH 185 (256)
.+.+.|++.|. |-.+...|+++ +||-+.++ ++ -.+..++.|..-.-++|+.+.+|-
T Consensus 16 ri~~~l~e~g~~v~~eGD~ivas~pgis~ieik~E~-----kkL~v~t~~~~~d~~~l~~~ktyndfl 78 (96)
T COG4004 16 RIMRGLSELGWTVSEEGDRIVASSPGISRIEIKPEN-----KKLLVNTTDYTDDETKLQTAKTYNDFL 78 (96)
T ss_pred HHHHHHHHhCeeEeecccEEEEecCCceEEEEeccc-----ceEEEecccccCchhHHHHHHHHHHHH
Confidence 35567777776 66788889986 89999982 33 223356666666666666665553
No 371
>PHA03209 serine/threonine kinase US3; Provisional
Probab=20.93 E-value=1.9e+02 Score=26.49 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=56.4
Q ss_pred eecCccccceeEEEeecCCCCCCCceEEEEecCCCCCccccccHHHHHHHHHHHHhcCCCCceeEeeCC----eEEEEee
Q psy15662 77 TLLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGERALESIITDSVIFTLLSERKLGPTLHGVFPG----GRIEEYI 152 (256)
Q Consensus 77 ~l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n----GrIEefi 152 (256)
.+.-|-.-.+|++... .....|++++.-... ...|..+++.+...++ .++++.|.. ..|.+|+
T Consensus 73 ~lg~G~~g~Vy~~~~~-----~~~~~valK~~~~~~-------~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 73 TLTPGSEGRVFVATKP-----GQPDPVVLKIGQKGT-------TLIEAMLLQNVNHPSV-IRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred EecCCCCeEEEEEEEC-----CCCceEEEEeCCccc-------cHHHHHHHHhCCCCCC-cChhheEEeCCeeEEEEEcc
Confidence 4455666678888863 346788999843221 2358888887765555 457777652 3555665
Q ss_pred cCCCCCccccCC-----CCCCCC---hHHHHHHHHHHHhhcCCCC
Q psy15662 153 PDKETRKARSLK-----YSELTD---PAISRKIAEKMADIHLMQI 189 (256)
Q Consensus 153 ~~~~~~~gr~Lt-----~~el~d---p~i~~~IA~~La~lH~~~i 189 (256)
. +.-+. ...+.. -.+..+||..|+.+|...+
T Consensus 140 ~------~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 178 (357)
T PHA03209 140 S------SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRI 178 (357)
T ss_pred C------CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5 32111 011111 2467789999999998653
No 372
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=20.66 E-value=3.2e+02 Score=25.10 Aligned_cols=100 Identities=10% Similarity=0.117 Sum_probs=56.4
Q ss_pred ecCccccceeEEEeecCCCCCCCceEEEEecCCCCCc-cccccHHHHHHHHHHHHhcCCCCceeEeeCC---------eE
Q psy15662 78 LLGGLTNMLYHVTLLQPIQSSEPSEVLLRIYGQTHGE-RALESIITDSVIFTLLSERKLGPTLHGVFPG---------GR 147 (256)
Q Consensus 78 l~GGlTN~~ykv~~~~~~~~~~~~~vLlRIyG~~t~e-~~~idR~~E~~i~~~Ls~~glgPkl~g~F~n---------Gr 147 (256)
+..|-...+|++... ..+..|+++..-..... .......+|..+++.+...++ .++++.|.. ..
T Consensus 8 lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 8 IGYGAFGVVWSVTDP-----RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV-LSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred eeeCCCEEEEEEEEC-----CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCc-CCHhheecCCCccccceEEE
Confidence 334555678888752 34678899887543200 111123457777777765454 345655531 36
Q ss_pred EEEeecCCCCCccccC----CCCCCCCh---HHHHHHHHHHHhhcCCCC
Q psy15662 148 IEEYIPDKETRKARSL----KYSELTDP---AISRKIAEKMADIHLMQI 189 (256)
Q Consensus 148 IEefi~~~~~~~gr~L----t~~el~dp---~i~~~IA~~La~lH~~~i 189 (256)
|.+|++ +.-+ ....+... .+..+|+..|+.+|+..+
T Consensus 82 v~e~~~------~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 124 (372)
T cd07853 82 VTELMQ------SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI 124 (372)
T ss_pred Eeeccc------cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 777776 3211 11122222 356789999999998654
No 373
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=20.26 E-value=97 Score=30.30 Aligned_cols=25 Identities=12% Similarity=0.266 Sum_probs=21.5
Q ss_pred CCcEEEEEeccceeeeeEEEEecCC
Q psy15662 19 AKDICVKRMSGGLTNMLYHVTLLQP 43 (256)
Q Consensus 19 ~~~i~v~~isggltN~l~~v~~~~~ 43 (256)
.++..++.++||-.|.||.|+.+..
T Consensus 26 ~~~~~~~elggGn~N~VyrV~~~~g 50 (401)
T PRK09550 26 KALLTAREIGDGNLNLVFRVSDTEG 50 (401)
T ss_pred cccceeeEcCCCceEEEEEEEeCCC
Confidence 3678899999999999999987653
No 374
>KOG4720|consensus
Probab=20.13 E-value=33 Score=33.13 Aligned_cols=18 Identities=22% Similarity=0.373 Sum_probs=15.4
Q ss_pred cccceEEeecCcccccee
Q psy15662 70 ITDSVIFTLLGGLTNMLY 87 (256)
Q Consensus 70 ~~~~~i~~l~GGlTN~~y 87 (256)
..+++++.+++||||.++
T Consensus 81 ~~~v~~~~fs~gitNkL~ 98 (391)
T KOG4720|consen 81 PPEVTFKRFSDGITNKLF 98 (391)
T ss_pred ccceeeeeeccchhHHHH
Confidence 467788899999999875
Done!