Query psy15663
Match_columns 179
No_of_seqs 182 out of 748
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 18:25:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dlo_A Brain-specific angiogen 96.9 0.00023 7.9E-09 62.3 1.5 46 31-77 321-374 (382)
2 2z73_A Rhodopsin; visual pigme 91.1 1.9 6.4E-05 36.4 10.5 85 90-174 40-132 (448)
3 3eml_A Human adenosine A2A rec 89.2 4.1 0.00014 34.2 11.0 86 89-174 26-116 (488)
4 3uon_A Human M2 muscarinic ace 88.7 4.5 0.00015 33.7 10.9 88 87-174 26-120 (467)
5 4dkl_A MU-type opioid receptor 83.9 10 0.00034 31.5 10.5 85 90-174 23-113 (464)
6 1u19_A Rhodopsin; G protein-co 83.8 10 0.00035 30.1 10.1 84 91-174 45-135 (349)
7 3rze_A Histamine H1 receptor, 83.0 8.7 0.0003 31.8 9.8 83 92-174 16-105 (452)
8 3sn6_R Lysozyme, beta-2 adrene 82.3 11 0.00039 32.4 10.5 86 89-174 187-279 (514)
9 4amj_A Beta-1 adrenergic recep 81.6 15 0.0005 28.5 10.2 30 145-174 79-108 (315)
10 4eiy_A Adenosine receptor A2A/ 80.1 12 0.00042 30.8 9.7 85 90-174 37-126 (447)
11 4ea3_A Fusion protein of nocic 79.0 13 0.00045 31.1 9.6 84 91-174 132-221 (434)
12 3odu_A C-X-C chemokine recepto 78.2 11 0.00036 31.8 8.8 85 89-174 53-143 (502)
13 3vw7_A Proteinase-activated re 78.1 17 0.00059 30.3 10.1 82 93-174 29-117 (484)
14 2ks9_A Substance-P receptor; w 76.6 23 0.00078 28.3 10.1 83 92-174 40-129 (364)
15 2rh1_A Beta-2-adrenergic recep 74.6 25 0.00086 30.1 10.3 82 93-174 49-137 (500)
16 2lnl_A C-X-C chemokine recepto 74.3 29 0.00098 27.0 11.9 82 93-174 20-106 (296)
17 3pbl_A D(3) dopamine receptor, 73.5 19 0.00063 30.1 9.0 30 145-174 107-136 (481)
18 3v2y_A Sphingosine 1-phosphate 72.0 38 0.0013 29.2 10.9 86 89-174 68-159 (520)
19 4dlq_A Latrophilin-1; GAIN dom 58.8 3.6 0.00012 35.3 1.6 33 31-65 341-381 (381)
20 1xrd_A LH-1, light-harvesting 31.9 41 0.0014 21.2 2.9 17 152-168 23-41 (52)
21 4grv_A Neurotensin receptor ty 30.1 2.6E+02 0.0087 23.8 9.3 28 147-174 107-134 (510)
22 2jwa_A Receptor tyrosine-prote 27.2 1.1E+02 0.0036 18.5 5.2 23 89-111 14-36 (44)
No 1
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=96.93 E-value=0.00023 Score=62.28 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=32.4
Q ss_pred eeEEEeecCeeeeeeccccceecCCCC--------ccccccCCCCcccccccCCC
Q psy15663 31 LGIYMVGYGISLIICGLSSAVNMRGYA--------GQAYCFLSPGPALIMRGPGS 77 (179)
Q Consensus 31 l~~~~v~w~~~~~i~G~~~a~n~~~y~--------t~~~C~~~~sFAvLm~~~~~ 77 (179)
-...||+|+.+....| .|.|+.+++. +.|.|+|+++|||||+..++
T Consensus 321 ~~~~Cv~W~~~~~~~~-~g~Ws~~GC~~~~~~~~~t~C~C~Hlt~FavLm~~~~~ 374 (382)
T 4dlo_A 321 LNPYCVLWDDSKTNES-LGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPRE 374 (382)
T ss_dssp EEEEEEEEECC---CT-TCEEECTTEEEEEEETTEEEEEESSCSEEEEEEECC--
T ss_pred CCceEeeeCCcCCCCC-CCCccccccEEEEeCCCEEEEECCCCchHHhhccccch
Confidence 3567999999874434 4788888863 23999999999999995444
No 2
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=91.06 E-value=1.9 Score=36.39 Aligned_cols=85 Identities=12% Similarity=0.058 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH-----hhc-ccc--ccccchhHHHHHHHHHHH
Q psy15663 90 IGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVF-----ALG-LRQ--TEAERLCQWIGVALHYFC 161 (179)
Q Consensus 90 iGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~F-----l~g-i~~--t~~~~~C~~va~lLHYf~ 161 (179)
+-..+++++++.-++..+++.|..+.+......++||+++=++..++. +.. ... .-....|.+.+.+.+.+.
T Consensus 40 ~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 119 (448)
T 2z73_A 40 FIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFG 119 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHH
Confidence 333444455544444443433322222223347888887765554332 111 111 234567999999999999
Q ss_pred HHHHHHHHHHHHh
Q psy15663 162 LCSLFWMAVTVKY 174 (179)
Q Consensus 162 LssF~WMlvEa~~ 174 (179)
.++..++.+-+++
T Consensus 120 ~~S~~~l~~isid 132 (448)
T 2z73_A 120 FMSIMTMAMISID 132 (448)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988888888876
No 3
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=89.19 E-value=4.1 Score=34.16 Aligned_cols=86 Identities=12% Similarity=0.047 Sum_probs=46.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---hc--cccccccchhHHHHHHHHHHHHH
Q psy15663 89 YIGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFA---LG--LRQTEAERLCQWIGVALHYFCLC 163 (179)
Q Consensus 89 yiGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl---~g--i~~t~~~~~C~~va~lLHYf~Ls 163 (179)
.+-..+++++++.-++..+++.+..+........+.||+++=++..++.+ +. .........|.+.+.+.+.+..+
T Consensus 26 ~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 105 (488)
T 3eml_A 26 TVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQS 105 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 34444555666555544434433222222333377777766444322111 11 12223456799999988888888
Q ss_pred HHHHHHHHHHh
Q psy15663 164 SLFWMAVTVKY 174 (179)
Q Consensus 164 sF~WMlvEa~~ 174 (179)
+..-+.+-++.
T Consensus 106 s~~~l~~is~d 116 (488)
T 3eml_A 106 SIFSLLAIAID 116 (488)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87777776654
No 4
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=88.69 E-value=4.5 Score=33.74 Aligned_cols=88 Identities=8% Similarity=-0.033 Sum_probs=48.3
Q ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh----hc-c--ccccccchhHHHHHHHHH
Q psy15663 87 IVYIGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFA----LG-L--RQTEAERLCQWIGVALHY 159 (179)
Q Consensus 87 ityiGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl----~g-i--~~t~~~~~C~~va~lLHY 159 (179)
+..+-..+++++++.-++..+++.+..+........+.||+++=++..++.+ .. . ........|.+.+.+.+.
T Consensus 26 ~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 105 (467)
T 3uon_A 26 IVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYV 105 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHH
Confidence 3344455556666555544444443322222233367777766554422111 11 1 112345679999998888
Q ss_pred HHHHHHHHHHHHHHh
Q psy15663 160 FCLCSLFWMAVTVKY 174 (179)
Q Consensus 160 f~LssF~WMlvEa~~ 174 (179)
+..++...+.+-+++
T Consensus 106 ~~~~s~~~l~~isid 120 (467)
T 3uon_A 106 VSNASVMNLLIISFD 120 (467)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887777777765
No 5
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=83.86 E-value=10 Score=31.45 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhc----c--ccccccchhHHHHHHHHHHHHH
Q psy15663 90 IGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFALG----L--RQTEAERLCQWIGVALHYFCLC 163 (179)
Q Consensus 90 iGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl~g----i--~~t~~~~~C~~va~lLHYf~Ls 163 (179)
+-..+.+++++.-++..+++.+..+........+.||+++=++..+..... + ...-....|.+.+.+...+..+
T Consensus 23 ~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 102 (464)
T 4dkl_A 23 LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIVISIDYYNMFT 102 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhHHHHHHHHHHH
Confidence 334445555554444444443322222223336777776655433321111 1 1123567899999998888888
Q ss_pred HHHHHHHHHHh
Q psy15663 164 SLFWMAVTVKY 174 (179)
Q Consensus 164 sF~WMlvEa~~ 174 (179)
+...+..-+++
T Consensus 103 s~~~l~~is~d 113 (464)
T 4dkl_A 103 SIFTLCTMSVD 113 (464)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88877777765
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=83.77 E-value=10 Score=30.07 Aligned_cols=84 Identities=8% Similarity=-0.077 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh-hc----cc--cccccchhHHHHHHHHHHHHH
Q psy15663 91 GTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFA-LG----LR--QTEAERLCQWIGVALHYFCLC 163 (179)
Q Consensus 91 Gc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl-~g----i~--~t~~~~~C~~va~lLHYf~Ls 163 (179)
-..+++++++.-++....+.+..+........+.||+++=++..+..+ .. .. ....+..|...+.+.+.+..+
T Consensus 45 ~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~ 124 (349)
T 1u19_A 45 MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEI 124 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHH
Confidence 334555555555444434333222222223366777665554332211 00 11 123456799999988888888
Q ss_pred HHHHHHHHHHh
Q psy15663 164 SLFWMAVTVKY 174 (179)
Q Consensus 164 sF~WMlvEa~~ 174 (179)
+..-+..-+++
T Consensus 125 s~~~l~~isid 135 (349)
T 1u19_A 125 ALWSLVVLAIE 135 (349)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 87777776654
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=83.01 E-value=8.7 Score=31.78 Aligned_cols=83 Identities=12% Similarity=-0.011 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH----hhc-c--ccccccchhHHHHHHHHHHHHHH
Q psy15663 92 TFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVF----ALG-L--RQTEAERLCQWIGVALHYFCLCS 164 (179)
Q Consensus 92 c~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~F----l~g-i--~~t~~~~~C~~va~lLHYf~Lss 164 (179)
..+++++++.-++..+.+.+..+........+.||+++=++..++. +.. . ........|.+.+.+.+.+..++
T Consensus 16 ~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 95 (452)
T 3rze_A 16 STICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTAS 95 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHHHHHH
Confidence 3444455544444333333322222223347778776654442211 111 1 11234567999999988888888
Q ss_pred HHHHHHHHHh
Q psy15663 165 LFWMAVTVKY 174 (179)
Q Consensus 165 F~WMlvEa~~ 174 (179)
...+..-+++
T Consensus 96 ~~~l~~is~d 105 (452)
T 3rze_A 96 IFSVFILCID 105 (452)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777777765
No 8
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=82.28 E-value=11 Score=32.35 Aligned_cols=86 Identities=13% Similarity=0.006 Sum_probs=45.6
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH---H-hhc-c--ccccccchhHHHHHHHHHHH
Q psy15663 89 YIGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLV---F-ALG-L--RQTEAERLCQWIGVALHYFC 161 (179)
Q Consensus 89 yiGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~---F-l~g-i--~~t~~~~~C~~va~lLHYf~ 161 (179)
.+-..+++++++.-+++..++.+..+........++||+++=++..++ + +.. + ...-....|.+.+.+...+.
T Consensus 187 i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~ 266 (514)
T 3sn6_R 187 IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCV 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHH
Confidence 334445555555444444333332222222333777777665543221 1 111 1 11235678999998888888
Q ss_pred HHHHHHHHHHHHh
Q psy15663 162 LCSLFWMAVTVKY 174 (179)
Q Consensus 162 LssF~WMlvEa~~ 174 (179)
.++..-+.+-+++
T Consensus 267 ~~S~~~l~~isid 279 (514)
T 3sn6_R 267 TASIETLCVIAVD 279 (514)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8777776666654
No 9
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=81.62 E-value=15 Score=28.45 Aligned_cols=30 Identities=13% Similarity=-0.043 Sum_probs=23.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15663 145 EAERLCQWIGVALHYFCLCSLFWMAVTVKY 174 (179)
Q Consensus 145 ~~~~~C~~va~lLHYf~LssF~WMlvEa~~ 174 (179)
.+...|.+.+.+.+.+..++...+..-+++
T Consensus 79 ~~~~~C~~~~~~~~~~~~~S~~~l~~isid 108 (315)
T 4amj_A 79 WGSFLCELWTSLDVLCVTASIETLCVIAID 108 (315)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356689999999888888888777777755
No 10
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=80.08 E-value=12 Score=30.79 Aligned_cols=85 Identities=12% Similarity=0.061 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---h--ccccccccchhHHHHHHHHHHHHHH
Q psy15663 90 IGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFA---L--GLRQTEAERLCQWIGVALHYFCLCS 164 (179)
Q Consensus 90 iGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl---~--gi~~t~~~~~C~~va~lLHYf~Lss 164 (179)
+-..+++++++.-++..+++.+..+......-.+.||+++=++..++.+ + ..........|.+.+.+.+.+..++
T Consensus 37 i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S 116 (447)
T 4eiy_A 37 VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSS 116 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccHHHHHHHHHHHHHHHH
Confidence 3344555555555444444433222222233367777765544322111 1 1122234567999998888877777
Q ss_pred HHHHHHHHHh
Q psy15663 165 LFWMAVTVKY 174 (179)
Q Consensus 165 F~WMlvEa~~ 174 (179)
..-+.+-+++
T Consensus 117 ~~~l~~is~d 126 (447)
T 4eiy_A 117 IFSLLAIAID 126 (447)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6656555554
No 11
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=79.04 E-value=13 Score=31.10 Aligned_cols=84 Identities=15% Similarity=0.061 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhc----c--ccccccchhHHHHHHHHHHHHHH
Q psy15663 91 GTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFALG----L--RQTEAERLCQWIGVALHYFCLCS 164 (179)
Q Consensus 91 Gc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl~g----i--~~t~~~~~C~~va~lLHYf~Lss 164 (179)
-..+++++++.-++..+++.+..+........+.||+++=++.-+..... . ........|.+.+.+.+.+..++
T Consensus 132 ~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S 211 (434)
T 4ea3_A 132 YLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTS 211 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHH
Confidence 33344555555444444444332222223336777776655431111010 0 11234567999999998888888
Q ss_pred HHHHHHHHHh
Q psy15663 165 LFWMAVTVKY 174 (179)
Q Consensus 165 F~WMlvEa~~ 174 (179)
...+.+-++.
T Consensus 212 ~~~l~~isid 221 (434)
T 4ea3_A 212 TFTLTAMSVD 221 (434)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777777755
No 12
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=78.16 E-value=11 Score=31.80 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=46.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHH---hhc--cccccccchhHHHHHHHHHHHH
Q psy15663 89 YIGTFIGVTCLLTASLSYITCYAAIAMGEK-MKHALVHTWLCMSVFCLVF---ALG--LRQTEAERLCQWIGVALHYFCL 162 (179)
Q Consensus 89 yiGc~vSl~~L~ltiit~~~~~~~~r~~~~-~~~i~~NL~~aLll~~l~F---l~g--i~~t~~~~~C~~va~lLHYf~L 162 (179)
.+-..+.+++++.-++..+++.+. |..|+ ....+.||+++=++.-+.. +.. .........|.+.+.+.+.+..
T Consensus 53 ~~~~~i~~~g~~gN~lvi~~~~~~-~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 131 (502)
T 3odu_A 53 TIYSIIFLTGIVGNGLVILVMGYQ-KKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLY 131 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTT-CCSCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCchhhhhHHHHHHHHHH
Confidence 444455566665555555454433 22233 2236667665544331110 000 1112345569999999888888
Q ss_pred HHHHHHHHHHHh
Q psy15663 163 CSLFWMAVTVKY 174 (179)
Q Consensus 163 ssF~WMlvEa~~ 174 (179)
++..-+.+-++.
T Consensus 132 ~s~~~l~~is~d 143 (502)
T 3odu_A 132 SSVWILAFISLD 143 (502)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 887777777654
No 13
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=78.11 E-value=17 Score=30.32 Aligned_cols=82 Identities=13% Similarity=0.139 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhc----c---ccccccchhHHHHHHHHHHHHHHH
Q psy15663 93 FIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFALG----L---RQTEAERLCQWIGVALHYFCLCSL 165 (179)
Q Consensus 93 ~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl~g----i---~~t~~~~~C~~va~lLHYf~LssF 165 (179)
.+.+++++.-++..+++.+..+......-.+.||+++=++.-+..... + ...-....|.+.+.+.+.+..++.
T Consensus 29 ~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~ 108 (484)
T 3vw7_A 29 GVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASI 108 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHH
Confidence 344455544444333333332222223336777766554432211110 1 112345689999988888877777
Q ss_pred HHHHHHHHh
Q psy15663 166 FWMAVTVKY 174 (179)
Q Consensus 166 ~WMlvEa~~ 174 (179)
.-+..-++.
T Consensus 109 ~~l~~is~d 117 (484)
T 3vw7_A 109 LLMTVISID 117 (484)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
No 14
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=76.60 E-value=23 Score=28.33 Aligned_cols=83 Identities=13% Similarity=0.001 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH----hhc-c--ccccccchhHHHHHHHHHHHHHH
Q psy15663 92 TFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVF----ALG-L--RQTEAERLCQWIGVALHYFCLCS 164 (179)
Q Consensus 92 c~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~F----l~g-i--~~t~~~~~C~~va~lLHYf~Lss 164 (179)
..+++++++.-.+....+.+..|........+.||+++=++..++. +.. . ........|...+.+.+.+..++
T Consensus 40 ~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s 119 (364)
T 2ks9_A 40 TVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFAS 119 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHH
Confidence 3445555555444443433332222223337777776544332211 111 1 11234567999998888888888
Q ss_pred HHHHHHHHHh
Q psy15663 165 LFWMAVTVKY 174 (179)
Q Consensus 165 F~WMlvEa~~ 174 (179)
...+..-+++
T Consensus 120 ~~~l~~isid 129 (364)
T 2ks9_A 120 IYSMTAVAFD 129 (364)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 15
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=74.62 E-value=25 Score=30.06 Aligned_cols=82 Identities=13% Similarity=-0.001 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH---H-hhc-c--ccccccchhHHHHHHHHHHHHHHH
Q psy15663 93 FIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLV---F-ALG-L--RQTEAERLCQWIGVALHYFCLCSL 165 (179)
Q Consensus 93 ~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~---F-l~g-i--~~t~~~~~C~~va~lLHYf~LssF 165 (179)
.+.+++++.-++..+++.+..|......-.+.||+++=++..++ + +.. + ...-....|.+.+.+...+..++.
T Consensus 49 ~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si 128 (500)
T 2rh1_A 49 LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASI 128 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHH
Confidence 34444444444444344433222222333777777664433221 1 111 1 112345679999888777777766
Q ss_pred HHHHHHHHh
Q psy15663 166 FWMAVTVKY 174 (179)
Q Consensus 166 ~WMlvEa~~ 174 (179)
.-+.+-++.
T Consensus 129 ~~l~~isid 137 (500)
T 2rh1_A 129 ETLCVIAVD 137 (500)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666654
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=74.29 E-value=29 Score=27.02 Aligned_cols=82 Identities=13% Similarity=0.093 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhc----c-ccccccchhHHHHHHHHHHHHHHHHH
Q psy15663 93 FIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFALG----L-RQTEAERLCQWIGVALHYFCLCSLFW 167 (179)
Q Consensus 93 ~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl~g----i-~~t~~~~~C~~va~lLHYf~LssF~W 167 (179)
.+.+++++.-.+....+.+..|....+.-.+.||+++=++.-+..... . ....++..|...+.+...+..++..-
T Consensus 20 ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~s~~~ 99 (296)
T 2lnl_A 20 LVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILL 99 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhccCCCccchhHHHHHhhhhhhhHHHHHHH
Confidence 345555544433333333322222223347788877654433221111 1 12345678999998888777777666
Q ss_pred HHHHHHh
Q psy15663 168 MAVTVKY 174 (179)
Q Consensus 168 MlvEa~~ 174 (179)
+..-+++
T Consensus 100 l~~isid 106 (296)
T 2lnl_A 100 LACISVD 106 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 6665554
No 17
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=73.55 E-value=19 Score=30.09 Aligned_cols=30 Identities=10% Similarity=0.091 Sum_probs=21.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15663 145 EAERLCQWIGVALHYFCLCSLFWMAVTVKY 174 (179)
Q Consensus 145 ~~~~~C~~va~lLHYf~LssF~WMlvEa~~ 174 (179)
.....|.+.+.+.+++..++..-+.+-++.
T Consensus 107 ~~~~~C~~~~~~~~~~~~~s~~~l~~is~d 136 (481)
T 3pbl_A 107 FSRICCDVFVTLDVMMCTASIWNLCAISID 136 (481)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 356689999988888777776666666654
No 18
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=72.00 E-value=38 Score=29.20 Aligned_cols=86 Identities=9% Similarity=-0.036 Sum_probs=43.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh----hcc--ccccccchhHHHHHHHHHHHH
Q psy15663 89 YIGTFIGVTCLLTASLSYITCYAAIAMGEKMKHALVHTWLCMSVFCLVFA----LGL--RQTEAERLCQWIGVALHYFCL 162 (179)
Q Consensus 89 yiGc~vSl~~L~ltiit~~~~~~~~r~~~~~~~i~~NL~~aLll~~l~Fl----~gi--~~t~~~~~C~~va~lLHYf~L 162 (179)
.+-..+.+++++.-++..+++.+..|......-.+.||+++=++.-++.+ ... ........|.+...+...+..
T Consensus 68 ~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 147 (520)
T 3v2y_A 68 VVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGATTYKLTPAQWFLREGSMFVALS 147 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeCccccchHHHHHHHHHH
Confidence 44444555555554444444433322222222367777766554433221 111 112345579988877777666
Q ss_pred HHHHHHHHHHHh
Q psy15663 163 CSLFWMAVTVKY 174 (179)
Q Consensus 163 ssF~WMlvEa~~ 174 (179)
++..=+.+-++.
T Consensus 148 ~S~~~l~~isid 159 (520)
T 3v2y_A 148 ASVFSLLAIAIE 159 (520)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 665555555544
No 19
>4dlq_A Latrophilin-1; GAIN domain, includes the GPS motif, hormone binding domain, autoproteolysis, A-latrotoxin, extracellular domain; HET: NAG; 1.85A {Rattus norvegicus}
Probab=58.77 E-value=3.6 Score=35.29 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=23.2
Q ss_pred eeEEEeecCeeeeeeccccceecCCCC------cc--ccccCC
Q psy15663 31 LGIYMVGYGISLIICGLSSAVNMRGYA------GQ--AYCFLS 65 (179)
Q Consensus 31 l~~~~v~w~~~~~i~G~~~a~n~~~y~------t~--~~C~~~ 65 (179)
-...||||+.+.. .| .|.|+.+++. ++ |.|+|+
T Consensus 341 ~~~~CvfW~~~~~-~~-~G~Ws~~GC~~~~~~~~~t~C~C~HL 381 (381)
T 4dlq_A 341 FNANCSFWNYSER-SM-LGYWSTQGCRLVESNKTHTTCACSHL 381 (381)
T ss_dssp EEEEEEEEEECTT-TC-CEEEECTTEEEEEECSSEEEEEEEEC
T ss_pred CcccceecccCCC-CC-CCCCCCCCeEEeeeCCCEEEEeCCCC
Confidence 3567999999863 23 5778888863 22 899884
No 20
>1xrd_A LH-1, light-harvesting protein B-880, alpha chain; membrane spanning helix, pigment binding, photosynthesis, membrane protein; NMR {Rhodospirillum rubrum} SCOP: f.3.1.1
Probab=31.92 E-value=41 Score=21.16 Aligned_cols=17 Identities=18% Similarity=0.710 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHH--HHHH
Q psy15663 152 WIGVALHYFCLCS--LFWM 168 (179)
Q Consensus 152 ~va~lLHYf~Lss--F~WM 168 (179)
+.|.+.|+.+|++ |-|.
T Consensus 23 vlAl~IHfilLSt~~fNWl 41 (52)
T 1xrd_A 23 VLALLIHFILLSTERFNWL 41 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCcccc
Confidence 3788999999997 6664
No 21
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=30.06 E-value=2.6e+02 Score=23.79 Aligned_cols=28 Identities=7% Similarity=-0.097 Sum_probs=21.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy15663 147 ERLCQWIGVALHYFCLCSLFWMAVTVKY 174 (179)
Q Consensus 147 ~~~C~~va~lLHYf~LssF~WMlvEa~~ 174 (179)
...|.+.+.+...+..++..-+.+-++.
T Consensus 107 ~~~C~~~~~~~~~~~~~S~~~l~~is~d 134 (510)
T 4grv_A 107 DAGCRGYYFLRDACTYATALNVASLSVA 134 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4579999988888888777766666654
No 22
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.25 E-value=1.1e+02 Score=18.49 Aligned_cols=23 Identities=9% Similarity=0.225 Sum_probs=10.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Q psy15663 89 YIGTFIGVTCLLTASLSYITCYA 111 (179)
Q Consensus 89 yiGc~vSl~~L~ltiit~~~~~~ 111 (179)
.+|..+.++.+++..+...++.|
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~R 36 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIK 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhee
Confidence 45555555444433333333333
Done!