RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy15666
(339 letters)
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural
genomics, niaid, national institute of allergy AN
infectious diseases; HET: CIT; 1.60A {Leishmania major}
Length = 288
Score = 278 bits (714), Expect = 2e-93
Identities = 89/249 (35%), Positives = 135/249 (54%), Gaps = 19/249 (7%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA Y NE S+G L+ + RED+FIT+KL G + + ++ +
Sbjct: 49 YRHIDTAAIYKNEESVGAGLR----ASGVPREDVFITTKLWNTEQG-YESTLAAFEESRQ 103
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
LG Y+DL+LIHWP G D S + + W A +LY +++IGVSN+
Sbjct: 104 KLGVDYIDLYLIHWP--RGKDILSKEGKKYLDS-WRAFEQLYK--EKKVRAIGVSNFHIH 158
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TSTQ 270
HL +++ V P VNQVE HP Q +L C+ +I ++A++ LG +
Sbjct: 159 HLEDVLAMCTVTPMVNQVELHPLNNQ-ADLRAFCDAKQIKVEAWSPLGQGKLLSNPILSA 217
Query: 271 IAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPNKQ 329
I ++ + AQV+LRW +Q+N + IPKSV ERI +N + DFEL E+V +I+ +
Sbjct: 218 IGAKYNKTAAQVILRWNIQKNLITIPKSVHRERIEENADIFDFELGAEDVMSIDALNTNS 277
Query: 330 KYCWNPDKI 338
+Y +PD+
Sbjct: 278 RYGPDPDEA 286
Score = 76.4 bits (189), Expect = 4e-16
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
VE HP Q +L C+ +I ++A++ LG L+++ L+ I ++ + AQV+L
Sbjct: 176 VELHPLNNQ-ADLRAFCDAKQIKVEAWSPLGQGK---LLSNPILSAIGAKYNKTAAQVIL 231
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW +Q+N K SV R ++EN
Sbjct: 232 RWNIQKNLITIPK------SVHRE----R--IEENA 255
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT;
2.10A {Trypanosoma brucei}
Length = 281
Score = 272 bits (697), Expect = 7e-91
Identities = 85/249 (34%), Positives = 130/249 (52%), Gaps = 31/249 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA Y NE S GRA+ + RE++F+T+KL G + S +++K
Sbjct: 48 YRHIDTAAIYKNEESAGRAIA----SCGVPREELFVTTKLWNSDQG-YESTLSAFEKSIK 102
Query: 158 DLGTTYLDLFLIHWP--GTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYT 215
LG Y+DL+LIHWP F +D+ W A +LY + +++IGVSN+
Sbjct: 103 KLGLEYVDLYLIHWPGKDKF-IDT------------WKAFEKLYA--DKKVRAIGVSNFH 147
Query: 216 AKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TS 268
H+ L+++ KV P VNQ+E HP Q L + C IA+ A++ LG
Sbjct: 148 EHHIEELLKHCKVAPMVNQIELHPLLNQK-ALCEYCKSKNIAVTAWSPLGQGHLVEDARL 206
Query: 269 TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPN 327
I + + AQV+LRW +Q + IPKS RI +N + DFEL+ E+++ I+ +
Sbjct: 207 KAIGGKYGKTAAQVMLRWEIQAGVITIPKSGNEARIKENGNIFDFELTAEDIQVIDGMNA 266
Query: 328 KQKYCWNPD 336
+Y +P+
Sbjct: 267 GHRYGPDPE 275
Score = 76.8 bits (190), Expect = 3e-16
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP Q L + C IA+ A++ LG L+ D+ L I + + AQV+L
Sbjct: 167 IELHPLLNQK-ALCEYCKSKNIAVTAWSPLGQGH---LVEDARLKAIGGKYGKTAAQVML 222
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW +Q K S + A R ++EN
Sbjct: 223 RWEIQAGVITIPK------SGNEA----R--IKENG 246
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus
subtilis} PDB: 3d3f_A*
Length = 276
Score = 271 bits (696), Expect = 8e-91
Identities = 94/253 (37%), Positives = 143/253 (56%), Gaps = 35/253 (13%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNA--DQVKSLVAQT 155
YR+IDTA Y NE +G +K + + RE++FITSK+ +N + + + ++
Sbjct: 45 YRSIDTAAIYKNEEGVGIGIK----ESGVAREELFITSKV---WNEDQGYETTLAAFEKS 97
Query: 156 LKDLGTTYLDLFLIHWP--GTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSN 213
L+ L YLDL+LIHWP + D+ W AL +LY +G +++IGVSN
Sbjct: 98 LERLQLDYLDLYLIHWPGKDKY-KDT------------WRALEKLYK--DGKIRAIGVSN 142
Query: 214 YTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS------- 266
+ HL L++++++ P VNQVEFHP Q EL D C I L+A++ L
Sbjct: 143 FQVHHLEELLKDAEIKPMVNQVEFHPRLTQK-ELRDYCKGQGIQLEAWSPLMQGQLLDNE 201
Query: 267 TSTQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENI 325
TQIA+ H+ S AQV+LRW LQ + IPKS+ RI++N + DFELS E++ I+ +
Sbjct: 202 VLTQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDAL 261
Query: 326 PNKQKYCWNPDKI 338
++ NPD++
Sbjct: 262 NKDERVGPNPDEL 274
Score = 76.4 bits (189), Expect = 4e-16
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
VEFHP Q EL D C I L+A++ L L+ + L QIA+ H+ S AQV+L
Sbjct: 164 VEFHPRLTQK-ELRDYCKGQGIQLEAWSPLMQGQ---LLDNEVLTQIAEKHNKSVAQVIL 219
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW LQ K S+ R + EN
Sbjct: 220 RWDLQHGVVTIPK------SIKEH----R--IIENA 243
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus
subtilis} PDB: 3b3d_A
Length = 310
Score = 271 bits (696), Expect = 3e-90
Identities = 94/251 (37%), Positives = 143/251 (56%), Gaps = 31/251 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR+IDTA Y NE +G +K + + RE++FITSK+ + G + + ++L+
Sbjct: 79 YRSIDTAAIYKNEEGVGIGIK----ESGVAREELFITSKVWNEDQG-YETTLAAFEKSLE 133
Query: 158 DLGTTYLDLFLIHWP--GTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYT 215
L YLDL+LIHWP + D+ W AL +LY +G +++IGVSN+
Sbjct: 134 RLQLDYLDLYLIHWPGKDKY-KDT------------WRALEKLYK--DGKIRAIGVSNFQ 178
Query: 216 AKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TS 268
HL L++++++ P VNQVEFHP Q +EL D C I L+A++ L
Sbjct: 179 VHHLEELLKDAEIKPMVNQVEFHPRLTQ-KELRDYCKGQGIQLEAWSPLMQGQLLDNEVL 237
Query: 269 TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPN 327
TQIA+ H+ S AQV+LRW LQ + IPKS+ RI++N + DFELS E++ I+ +
Sbjct: 238 TQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNK 297
Query: 328 KQKYCWNPDKI 338
++ NPD++
Sbjct: 298 DERVGPNPDEL 308
Score = 76.1 bits (188), Expect = 7e-16
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
VEFHP Q +EL D C I L+A++ L L+ + L QIA+ H+ S AQV+L
Sbjct: 198 VEFHPRLTQ-KELRDYCKGQGIQLEAWSPLMQGQ---LLDNEVLTQIAEKHNKSVAQVIL 253
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW LQ K S+ R + EN
Sbjct: 254 RWDLQHGVVTIPK------SIKEH----R--IIENA 277
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national
institute of allergy AN infectious diseases; HET: NAP;
1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Length = 290
Score = 269 bits (691), Expect = 9e-90
Identities = 86/250 (34%), Positives = 137/250 (54%), Gaps = 30/250 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA Y NE +G+ ++ + + RE++++T+K+ G ++ + ++ +
Sbjct: 52 YRHIDTAYIYSNERGVGQGIR----ESGVPREEVWVTTKVWNSDQG-YEKTLAAFERSRE 106
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
LG Y+DL+LIHWPG + W AL +LY +++IGVSN+
Sbjct: 107 LLGLEYIDLYLIHWPGKKKFVDT-----------WKALEKLYE--EKKVRAIGVSNFEPH 153
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS----------T 267
HL L ++ K+ P VNQVE HP F Q L + C Q+ IA+ A++ LGS
Sbjct: 154 HLTELFKSCKIRPMVNQVELHPLFQQR-TLREFCKQHNIAITAWSPLGSGEEAGILKNHV 212
Query: 268 STQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIP 326
+IAK H+ SPAQV++RW +Q + IPKS RI +N + DF+L+ EE++ I+ +
Sbjct: 213 LGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELN 272
Query: 327 NKQKYCWNPD 336
++ +PD
Sbjct: 273 EDKRIGADPD 282
Score = 80.7 bits (200), Expect = 1e-17
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
VE HP F Q L + C Q+ IA+ A++ LGS ++ + L +IAK H+ SPAQV++
Sbjct: 171 VELHPLFQQR-TLREFCKQHNIAITAWSPLGSGEEAGILKNHVLGEIAKKHNKSPAQVVI 229
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW +Q K S + R +QENF
Sbjct: 230 RWDIQHGIVTIPK------STNKG----R--IQENF 253
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics,
joint center for structural genomics, PSI, protein
structure initiative; HET: NAP; 2.40A {Thermotoga
maritima} SCOP: c.1.7.1
Length = 298
Score = 268 bits (688), Expect = 3e-89
Identities = 82/254 (32%), Positives = 137/254 (53%), Gaps = 29/254 (11%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA Y NE +GRA+K + + ++RE++F+T+KL G + K ++LK
Sbjct: 53 YRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVG-YESTKKAFEKSLK 111
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
L Y+DL+LIH P + W A+ E+Y +G +++IGVSN+
Sbjct: 112 KLQLEYIDLYLIHQPFGDVHCA------------WKAMEEMYK--DGLVRAIGVSNFYPD 157
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS---------TS 268
L++L+ + ++VPAVNQ+E HP + + QE I+ I +A+
Sbjct: 158 RLMDLMVHHEIVPAVNQIEIHPFYQR-QEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVL 216
Query: 269 TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPN 327
IA+ + + AQV+LRW Q+ + IPK+V ER+ +NI++ DFEL+ E+++ I +
Sbjct: 217 RSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDE 276
Query: 328 KQKYCW---NPDKI 338
Q + +P+ +
Sbjct: 277 GQSAFFSHRDPEVV 290
Score = 75.7 bits (187), Expect = 8e-16
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP + + QE I+ I +A+ N + + L IA+ + + AQV+L
Sbjct: 175 IEIHPFYQR-QEEIEFMRNYNIQPEAWGPFAEGRKN-IFQNGVLRSIAEKYGKTVAQVIL 232
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW Q+ K +V R ++EN
Sbjct: 233 RWLTQKGIVAIPK------TVRRE----R--MKENI 256
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase;
HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Length = 344
Score = 268 bits (687), Expect = 2e-88
Identities = 81/254 (31%), Positives = 135/254 (53%), Gaps = 20/254 (7%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR +DTA EYG E +G+ LK + + R+D+F+TSK+ ++V+ + TLK
Sbjct: 75 YRHVDTAAEYGVEKEVGKGLKAAMEA-GIDRKDLFVTSKIWCTNLA-PERVRPALENTLK 132
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTL-----WNALTELYNPNNGPLKSIGVS 212
DL Y+DL+ IHWP + P + W + L +G +K IGV
Sbjct: 133 DLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVK--DGLVKDIGVC 190
Query: 213 NYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTS---- 268
NYT L L++++K+ PAV Q+E HP + ++ + C ++ I + AY+ LGS+
Sbjct: 191 NYTVTKLNRLLRSAKIPPAVCQMEMHPGWKND-KIFEACKKHGIHITAYSPLGSSEKNLA 249
Query: 269 -----TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAI 322
++A + +P QVL++WALQ +IPKS ERI +NI + +E+ E+ K +
Sbjct: 250 HDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVL 309
Query: 323 ENIPNKQKYCWNPD 336
+I ++++ +
Sbjct: 310 CSIKDEKRVLTGEE 323
Score = 85.4 bits (212), Expect = 5e-19
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP + ++ + C ++ I + AY+ LGS S L D + ++A + +P QVL+
Sbjct: 213 MEMHPGWKND-KIFEACKKHGIHITAYSPLGS-SEKNLAHDPVVEKVANKLNKTPGQVLI 270
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
+WALQ K S R ++EN
Sbjct: 271 KWALQRGTSVIPK------SSKDE----R--IKENI 294
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961;
structural genomics, PSI, protein structure initiative;
1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Length = 317
Score = 267 bits (685), Expect = 2e-88
Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 32/263 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA Y NE +IG A+K LL + +KRE++FIT+K +++ + ++LK
Sbjct: 43 YRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWTHELA-PGKLEGGLRESLK 101
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
L Y+DL+L H P F D S W +Y G K++GVSN+
Sbjct: 102 KLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDV-WRQFDAVYK--AGLAKAVGVSNWNND 158
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTS--------- 268
+ + +QVE H +F Q + +D C ++ I++ +YA+LGS
Sbjct: 159 QISRALALGLTPVHNSQVELHLYFPQH-DHVDFCKKHNISVTSYATLGSPGRVNFTLPTG 217
Query: 269 -----------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL- 310
+A+ +PAQVLLR+AL I+PKS+ RI +N +
Sbjct: 218 QKLDWAPAPSDLQDQNVLALAEKTHKTPAQVLLRYALDRGCAILPKSIQENRIKENFEVF 277
Query: 311 DFELSPEEVKAIENIPNKQKYCW 333
DF L+ E++ +E N Q+
Sbjct: 278 DFSLTEEDIAKLEESKNSQRLFL 300
Score = 78.0 bits (193), Expect = 2e-16
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 29/112 (25%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN----------------PLIADSTL 44
VE H +F Q + +D C ++ I++ +YA+LGS + D +
Sbjct: 176 VELHLYFPQH-DHVDFCKKHNISVTSYATLGSPGRVNFTLPTGQKLDWAPAPSDLQDQNV 234
Query: 45 AQIAKVHSVSPAQVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
+A+ +PAQVLLR+AL K S+ R ++ENF
Sbjct: 235 LALAEKTHKTPAQVLLRYALDRGCAILPK------SIQEN----R--IKENF 274
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid,
biosynthesis, plant protein; HET: NAP; 1.70A {Medicago
sativa}
Length = 312
Score = 266 bits (683), Expect = 3e-88
Identities = 86/261 (32%), Positives = 134/261 (51%), Gaps = 27/261 (10%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR DTA YG+E ++G ALK + + R+D+F+TSKL N V + ++LK
Sbjct: 49 YRHFDTAAAYGSEQALGEALKEAIELGLVTRDDLFVTSKLWVTENH-PHLVIPALQKSLK 107
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIG 210
L YLDL+LIHWP +F +D + + W ++ E G K+IG
Sbjct: 108 TLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGV-WESMEESLK--LGLTKAIG 164
Query: 211 VSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTST- 269
VSN++ K L NL+ + V+PAVNQVE + + Q +L + CN + I L A++ + ++
Sbjct: 165 VSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQK-KLREFCNAHGIVLTAFSPVRKGASR 223
Query: 270 ------------QIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSP 316
+IA H S AQ+ LRW ++ +PKS ER+ QN+ + D+ L+
Sbjct: 224 GPNEVMENDMLKEIADAHGKSVAQISLRWLYEQGVTFVPKSYDKERMNQNLRIFDWSLTK 283
Query: 317 EEVKAIENIPNKQKYCWNPDK 337
E+ + I I + + P K
Sbjct: 284 EDHEKIAQI-KQNRLIPGPTK 303
Score = 82.2 bits (204), Expect = 5e-18
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGS---TSSNPLIADSTLAQIAKVHSVSPAQ 57
VE + + Q +L + CN + I L A++ + N ++ + L +IA H S AQ
Sbjct: 189 VEMNLAWQQK-KLREFCNAHGIVLTAFSPVRKGASRGPNEVMENDMLKEIADAHGKSVAQ 247
Query: 58 VLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
+ LRW ++ K S R + +N
Sbjct: 248 ISLRWLYEQGVTFVPK------SYDKE----R--MNQNL 274
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel,
aldo-ketoreductase, NADPH dependant, BACT targets at
IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP:
c.1.7.1
Length = 296
Score = 263 bits (675), Expect = 3e-87
Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 29/249 (11%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR+IDTA Y NE +G+ALK ++ RE++FIT+KL +N + + + + +LK
Sbjct: 63 YRSIDTAAAYKNEEGVGKALK----NASVNREELFITTKL---WNDDHKRPREALLDSLK 115
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
L Y+DL+L+HWP P W + EL G +KSIGV N+
Sbjct: 116 KLQLDYIDLYLMHWPV--------PAIDHYVEA-WKGMIELQK--EGLIKSIGVCNFQIH 164
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS---------TS 268
HL LI + V P +NQ+E HP Q ++L +KI ++++ L
Sbjct: 165 HLQRLIDETGVTPVINQIELHPLMQQ-RQLHAWNATHKIQTESWSPLAQGGKGVFDQKVI 223
Query: 269 TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPN 327
+A + +PAQ+++RW L ++IPKSVTP RI +N + DF L +E+ I +
Sbjct: 224 RDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQ 283
Query: 328 KQKYCWNPD 336
++ +PD
Sbjct: 284 GKRLGPDPD 292
Score = 75.7 bits (187), Expect = 7e-16
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP Q ++L +KI ++++ L + + +A + +PAQ+++
Sbjct: 182 IELHPLMQQ-RQLHAWNATHKIQTESWSPLA-QGGKGVFDQKVIRDLADKYGKTPAQIVI 239
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW L K SV+P+ R + ENF
Sbjct: 240 RWHLDSGLVVIPK------SVTPS----R--IAENF 263
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium
smegmatis} PDB: 2wzt_A
Length = 283
Score = 262 bits (673), Expect = 3e-87
Identities = 82/247 (33%), Positives = 130/247 (52%), Gaps = 25/247 (10%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA YGNEA++GRA+ + R++I++T+KL+ G ++ +L+
Sbjct: 49 YRLIDTAAAYGNEAAVGRAIA----ASGIPRDEIYVTTKLATPDQG-FTSSQAAARASLE 103
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
LG Y+DL+LIHWPG + W L ++ +G +SIGV N+ A+
Sbjct: 104 RLGLDYVDLYLIHWPG--------GDTSKYVDS-WGGLMKVKE--DGIARSIGVCNFGAE 152
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TSTQ 270
L ++ + PAVNQ+E HP Q L +V I +AY LG T
Sbjct: 153 DLETIVSLTYFTPAVNQIELHPLLNQ-AALREVNAGYNIVTEAYGPLGVGRLLDHPAVTA 211
Query: 271 IAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPNKQ 329
IA+ H + AQVLLRW++Q ++I +S PERI N+ + FEL+ +E++ + + +
Sbjct: 212 IAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGT 271
Query: 330 KYCWNPD 336
++ +P
Sbjct: 272 RFRPDPA 278
Score = 74.1 bits (183), Expect = 3e-15
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP Q L +V I +AY LG L+ + IA+ H + AQVLL
Sbjct: 170 IELHPLLNQ-AALREVNAGYNIVTEAYGPLGV---GRLLDHPAVTAIAEAHGRTAAQVLL 225
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW++Q + S +P ++ N
Sbjct: 226 RWSIQLGNVVISR------SANPERI------ASNL 249
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance,
oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Length = 335
Score = 264 bits (677), Expect = 4e-87
Identities = 93/254 (36%), Positives = 129/254 (50%), Gaps = 24/254 (9%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR ID AQ YGNE IG LK L +KRED+FITSKL + V + +TLK
Sbjct: 63 YRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHD-PQDVPEALNRTLK 121
Query: 158 DLGTTYLDLFLIHWPGTF--GVDSSSPQQISNRHTL--WNALTELYNPNNGPLKSIGVSN 213
DL Y+DL+LIHWP G P+ + W A+ LY+ +G ++IGVSN
Sbjct: 122 DLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYD--SGKARAIGVSN 179
Query: 214 YTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTST---- 269
++ K L +L++ ++V PAVNQVE HP + Q +L + C + L AY+ LGS T
Sbjct: 180 FSTKKLADLLELARVPPAVNQVECHPSWRQT-KLQEFCKSKGVHLSAYSPLGSPGTTWLK 238
Query: 270 ----------QIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEE 318
+A+ SPAQV LRW LQ ++PKS RI +N + D+ +
Sbjct: 239 SDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYM 298
Query: 319 VKAIENIPNKQKYC 332
I + +
Sbjct: 299 FAKFAEI-EQARLV 311
Score = 81.9 bits (203), Expect = 8e-18
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSS----NPLIADSTLAQIAKVHSVSPA 56
VE HP + Q +L + C + L AY+ LGS + + ++ + L +A+ SPA
Sbjct: 201 VECHPSWRQT-KLQEFCKSKGVHLSAYSPLGSPGTTWLKSDVLKNPILNMVAEKLGKSPA 259
Query: 57 QVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
QV LRW LQ K S + R ++ENF
Sbjct: 260 QVALRWGLQMGHSVLPK------STNEG----R--IKENF 287
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance,
oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Length = 331
Score = 262 bits (672), Expect = 2e-86
Identities = 88/254 (34%), Positives = 138/254 (54%), Gaps = 24/254 (9%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR ID A YGNE IG LK L+ +KRE++FITSKL + + V + +TL+
Sbjct: 59 YRHIDCASIYGNEKEIGGVLKKLIGDGFVKREELFITSKLWSNDHL-PEDVPKALEKTLQ 117
Query: 158 DLGTTYLDLFLIHWPGTF--GVDSSSPQQISNRHTL--WNALTELYNPNNGPLKSIGVSN 213
DL Y+DL+LIHWP + +P+ ++ W A+ LY+ +G ++IGVSN
Sbjct: 118 DLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYD--SGKARAIGVSN 175
Query: 214 YTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTST---- 269
+++K L +L+ ++V PAVNQVE HP + Q L ++C + L Y+ LGS S
Sbjct: 176 FSSKKLTDLLNVARVTPAVNQVECHPVWQQQ-GLHELCKSKGVHLSGYSPLGSQSKGEVR 234
Query: 270 ----------QIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEE 318
++A+ + AQV LRW LQ ++PKS + R+ +N+ + D+ + +
Sbjct: 235 LKVLQNPIVTEVAEKLGKTTAQVALRWGLQTGHSVLPKSSSGARLKENLDVFDWSIPEDL 294
Query: 319 VKAIENIPNKQKYC 332
NI ++K+C
Sbjct: 295 FTKFSNI-PQEKFC 307
Score = 81.9 bits (203), Expect = 8e-18
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTS----SNPLIADSTLAQIAKVHSVSPA 56
VE HP + Q L ++C + L Y+ LGS S ++ + + ++A+ + A
Sbjct: 197 VECHPVWQQQ-GLHELCKSKGVHLSGYSPLGSQSKGEVRLKVLQNPIVTEVAEKLGKTTA 255
Query: 57 QVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
QV LRW LQ K S S A R L+EN
Sbjct: 256 QVALRWGLQTGHSVLPK------SSSGA----R--LKENL 283
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc,
PSI-biology, structural genomics; 1.96A {Sinorhizobium
meliloti}
Length = 298
Score = 259 bits (663), Expect = 2e-85
Identities = 73/253 (28%), Positives = 127/253 (50%), Gaps = 31/253 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
+R +DTAQ YGNEA +G A++ K + R D+F+T+K+ D + V ++L+
Sbjct: 61 FRHVDTAQIYGNEAEVGEAIQ----KSGIPRADVFLTTKVWVDNYR-HDAFIASVDESLR 115
Query: 158 DLGTTYLDLFLIHWP--GTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYT 215
L T ++DL L+HWP + AL E+ N G ++ IG+SN+
Sbjct: 116 KLRTDHVDLLLLHWPGSDVPMAER------------IGALNEVRN--AGKVRHIGISNFN 161
Query: 216 AKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TS 268
+ + S A NQVE+HP+ Q +++ + ++L +Y ++ +
Sbjct: 162 TTQMEEAARLSDAPIATNQVEYHPYLDQ-TKVLQTARRLGMSLTSYYAMANGKVPADPLL 220
Query: 269 TQIAKVHSVSPAQVLLRWAL-QENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIP 326
T+I H + AQV LRW + Q++ +++ K+ T R+ +N A+ DF L+ EE+ A+ +
Sbjct: 221 TEIGGRHGKTAAQVALRWLVQQQDVIVLSKTATEARLKENFAIFDFALTREEMAAVRELA 280
Query: 327 NKQKYCWNPDKIA 339
NP +A
Sbjct: 281 RPNGRIVNPQGLA 293
Score = 71.5 bits (176), Expect = 2e-14
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
VE+HP+ Q +++ + ++L +Y ++ + + AD L +I H + AQV L
Sbjct: 181 VEYHPYLDQ-TKVLQTARRLGMSLTSYYAMANGK---VPADPLLTEIGGRHGKTAAQVAL 236
Query: 61 RWALQEN 67
RW +Q+
Sbjct: 237 RWLVQQQ 243
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography;
1.80A {Brucella melitensis biovar}
Length = 283
Score = 258 bits (661), Expect = 2e-85
Identities = 90/233 (38%), Positives = 125/233 (53%), Gaps = 25/233 (10%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA YGNE +G+A+ + R DIF+T+KL G + +LK
Sbjct: 64 YRHIDTATIYGNEEGVGKAIN----GSGIARADIFLTTKLWNSDQG-YESTLKAFDTSLK 118
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
LGT Y+DL+LIHWP P + T W A +L G +KSIGVSN+
Sbjct: 119 KLGTDYVDLYLIHWP--------MPSKDLFMET-WRAFIKLKE--EGRVKSIGVSNFRTA 167
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS-------TSTQ 270
L LI+ S V P +NQ+E HP F Q EL ++ IA +A++ LG T
Sbjct: 168 DLERLIKESGVTPVLNQIELHPQFQQ-DELRLFHGKHDIATEAWSPLGQGKLLEDPTLKS 226
Query: 271 IAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAI 322
IA+ H+ S AQ++LRW ++ ++IPKS+TP RI +N + DF L+ + AI
Sbjct: 227 IAEKHAKSVAQIILRWHIETGNIVIPKSITPARIKENFDIFDFTLNGTDHDAI 279
Score = 73.7 bits (182), Expect = 4e-15
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 16/96 (16%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP F Q EL ++ IA +A++ LG L+ D TL IA+ H+ S AQ++L
Sbjct: 185 IELHPQFQQ-DELRLFHGKHDIATEAWSPLGQGK---LLEDPTLKSIAEKHAKSVAQIIL 240
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW ++ K S++PA R ++ENF
Sbjct: 241 RWHIETGNIVIPK------SITPA----R--IKENF 264
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel,
dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis}
SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A*
1sm9_A* 1r38_A* 1z9a_A*
Length = 322
Score = 257 bits (660), Expect = 1e-84
Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 43/273 (15%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR D A++YGNE +G +K + + +KRE+IF+TSKL Y+ V++ + +TL
Sbjct: 43 YRLFDGAEDYGNEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHD-PKNVETALNKTLA 101
Query: 158 DLGTTYLDLFLIHWPGTF---GVDSSSPQQ-------------ISNRHTLWNALTELYNP 201
DL Y+DLFLIH+P F ++ P + T W AL +L
Sbjct: 102 DLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILET-WKALEKLVA- 159
Query: 202 NNGPLKSIGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAY 261
G +KSIGVSN+ L++L++ + + PAV QVE HP+ QP +LI+ + + + AY
Sbjct: 160 -AGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQP-KLIEFAQKAGVTITAY 217
Query: 262 ASLGSTS---------------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVT 300
+S G S IA ++ +PA+VLLRWA Q +IPKS
Sbjct: 218 SSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAAKYNKTPAEVLLRWAAQRGIAVIPKSNL 277
Query: 301 PERIVQNIAL-DFELSPEEVKAIENIPNKQKYC 332
PER+VQN + F+L+ E+ + I + ++
Sbjct: 278 PERLVQNRSFNTFDLTKEDFEEIAKLDIGLRFN 310
Score = 81.5 bits (202), Expect = 1e-17
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 24/107 (22%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN-----------PLIADSTLAQIAK 49
VE HP+ QP +LI+ + + + AY+S G S L A T+ IA
Sbjct: 192 VEHHPYLQQP-KLIEFAQKAGVTITAYSSFGPQSFVEMNQGRALNTPTLFAHDTIKAIAA 250
Query: 50 VHSVSPAQVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
++ +PA+VLLRWA Q K S P R L +N
Sbjct: 251 KYNKTPAEVLLRWAAQRGIAVIPK------SNLPE----R--LVQNR 285
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM
barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP:
c.1.7.1 PDB: 1a80_A* 1m9h_A*
Length = 278
Score = 255 bits (654), Expect = 2e-84
Identities = 85/254 (33%), Positives = 136/254 (53%), Gaps = 30/254 (11%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR IDTA YGNE +G A+ + R+D+FIT+KL + D+ + +A++L
Sbjct: 41 YRHIDTAAIYGNEEGVGAAIA----ASGIARDDLFITTKLWNDRHD-GDEPAAAIAESLA 95
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGVSNYTAK 217
L +DL+L+HWP +P + H W + EL G +SIGVSN+
Sbjct: 96 KLALDQVDLYLVHWP--------TPAADNYVHA-WEKMIELRA--AGLTRSIGVSNHLVP 144
Query: 218 HLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS---------TS 268
HL ++ + VVPAVNQ+E HP + Q +E+ D + + ++++ LG
Sbjct: 145 HLERIVAATGVVPAVNQIELHPAYQQ-REITDWAAAHDVKIESWGPLGQGKYDLFGAEPV 203
Query: 269 TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL-DFELSPEEVKAIENIPN 327
T A H +PAQ +LRW LQ+ F++ PKSV ER+ +N+ + DF+L+ E+ AI+ +
Sbjct: 204 TAAAAAHGKTPAQAVLRWHLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAIDAMDP 263
Query: 328 KQ---KYCWNPDKI 338
+ +PD++
Sbjct: 264 GDGSGRVSAHPDEV 277
Score = 75.2 bits (186), Expect = 1e-15
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLL 60
+E HP + Q +E+ D + + ++++ LG L + A H +PAQ +L
Sbjct: 162 IELHPAYQQ-REITDWAAAHDVKIESWGPLG-QGKYDLFGAEPVTAAAAAHGKTPAQAVL 219
Query: 61 RWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
RW LQ+ F F K SV R L+EN
Sbjct: 220 RWHLQKGFVVFPK------SVRRE----R--LEENL 243
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like
protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A
{Rattus norvegicus} PDB: 3qkz_A*
Length = 316
Score = 256 bits (656), Expect = 3e-84
Identities = 91/264 (34%), Positives = 132/264 (50%), Gaps = 33/264 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR D A Y NE+ +G A++ + + ++RED+FI SKL + +K +TL
Sbjct: 40 YRHFDCAYVYQNESEVGEAIQEKIKEKAVRREDLFIVSKLWSTFFE-KSLMKEAFQKTLS 98
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLKS 208
DL YLDL+LIHWP DS +S L W + EL + G +K+
Sbjct: 99 DLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVD--QGLVKA 156
Query: 209 IGVSNYTAKHLVNLIQNS--KVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
+GVSN+ + L+ K P NQVE HP+ Q +LI C+ IA+ AY+ LGS
Sbjct: 157 LGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQE-KLIQYCHSKGIAVIAYSPLGS 215
Query: 267 TS-----------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIA 309
+IA H + AQVL+R+ +Q N +IPKSVT I +NI
Sbjct: 216 PDRPYAKPEDPVVLEIPKIKEIAAKHKKTIAQVLIRFHVQRNVAVIPKSVTLSHIKENIQ 275
Query: 310 L-DFELSPEEVKAIENIPNKQKYC 332
+ DF+LS E++ AI ++ + C
Sbjct: 276 VFDFQLSEEDMAAILSLNRNWRAC 299
Score = 83.0 bits (206), Expect = 3e-18
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN-------PLIADSTLAQIAKVHSV 53
VE HP+ Q +LI C+ IA+ AY+ LGS ++ + +IA H
Sbjct: 185 VECHPYLTQE-KLIQYCHSKGIAVIAYSPLGSPDRPYAKPEDPVVLEIPKIKEIAAKHKK 243
Query: 54 SPAQVLLRWALQ 65
+ AQVL+R+ +Q
Sbjct: 244 TIAQVLIRFHVQ 255
>2ao0_A Aldehyde dehydrogenase; TIM barrel, aldo-keto reductase, ternary
complex; HET: NAP FID; 1.85A {Sus scrofa} PDB: 3h4g_A*
3cv7_A* 3fx4_A* 1hqt_A* 1ae4_A* 1cwn_A* 2alr_A
Length = 324
Score = 256 bits (657), Expect = 4e-84
Identities = 92/263 (34%), Positives = 142/263 (53%), Gaps = 32/263 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALK-VLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTL 156
YR ID A YGNE IG AL+ + P + RE++F+TSKL + + V+ + +TL
Sbjct: 40 YRHIDCAAIYGNELEIGEALQETVGPGKAVPREELFVTSKLWNTKHH-PEDVEPALRKTL 98
Query: 157 KDLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLK 207
DL YLDL+L+HWP F ++ + H W AL L G ++
Sbjct: 99 ADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTIRYDATHYKDTWKALEALVA--KGLVR 156
Query: 208 SIGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGST 267
++G+SN++++ + +++ + V PAV QVE HP+ Q ELI C + + AY+ LGS+
Sbjct: 157 ALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQN-ELIAHCQARGLEVTAYSPLGSS 215
Query: 268 S-----------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIAL 310
+A+ ++ SPAQ+LLRW +Q + IPKSVTP RI+QNI +
Sbjct: 216 DRAWRDPNEPVLLEEPVVQALAEKYNRSPAQILLRWQVQRKVICIPKSVTPSRILQNIQV 275
Query: 311 -DFELSPEEVKAIENIPNKQKYC 332
DF SPEE+K ++ + ++
Sbjct: 276 FDFTFSPEEMKQLDALNKNLRFI 298
Score = 82.6 bits (205), Expect = 4e-18
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN-------PLIADSTLAQIAKVHSV 53
VE HP+ Q ELI C + + AY+ LGS+ L+ + + +A+ ++
Sbjct: 184 VECHPYLAQN-ELIAHCQARGLEVTAYSPLGSSDRAWRDPNEPVLLEEPVVQALAEKYNR 242
Query: 54 SPAQVLLRWALQ 65
SPAQ+LLRW +Q
Sbjct: 243 SPAQILLRWQVQ 254
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT;
0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A*
1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A*
2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A*
2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Length = 316
Score = 256 bits (656), Expect = 4e-84
Identities = 96/264 (36%), Positives = 138/264 (52%), Gaps = 33/264 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR ID A Y NE +G A++ L + +KRE++FI SKL Y+ VK +TL
Sbjct: 40 YRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHE-KGLVKGACQKTLS 98
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLKS 208
DL YLDL+LIHWP F +D S S+ + L W A+ EL + G +K+
Sbjct: 99 DLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVD--EGLVKA 156
Query: 209 IGVSNYTAKHLVNLIQNS--KVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
IG+SN+ + ++ K PAVNQ+E HP+ Q +LI C I + AY+ LGS
Sbjct: 157 IGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQE-KLIQYCQSKGIVVTAYSPLGS 215
Query: 267 TS-----------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIA 309
IA H+ + AQVL+R+ +Q N ++IPKSVTPERI +N
Sbjct: 216 PDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFK 275
Query: 310 L-DFELSPEEVKAIENIPNKQKYC 332
+ DFELS +++ + + + C
Sbjct: 276 VFDFELSSQDMTTLLSYNRNWRVC 299
Score = 82.6 bits (205), Expect = 4e-18
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN-------PLIADSTLAQIAKVHSV 53
+E HP+ Q +LI C I + AY+ LGS L+ D + IA H+
Sbjct: 185 IECHPYLTQE-KLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNK 243
Query: 54 SPAQVLLRWALQ 65
+ AQVL+R+ +Q
Sbjct: 244 TTAQVLIRFPMQ 255
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase,
NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP:
c.1.7.1 PDB: 1lwi_A*
Length = 323
Score = 255 bits (653), Expect = 1e-83
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 34/265 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
+R D+A Y E +G+A++ + +KREDIF TSKL ++ + V++ + +TLK
Sbjct: 46 FRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHR-PELVRTCLEKTLK 104
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLKS 208
Y+DL++IH+P F D W A+ + + G KS
Sbjct: 105 STQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKD--AGLAKS 162
Query: 209 IGVSNYTAKHLVNLIQNS--KVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
IGVSN+ + L ++ K P NQVE H + Q +++D C I L +Y +LGS
Sbjct: 163 IGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQS-KMLDYCKSKDIILVSYCTLGS 221
Query: 267 TS------------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNI 308
+ IAK + +PA V LR+ LQ + + +S +RI +
Sbjct: 222 SRDKTWVDQKSPVLLDDPVLCAIAKKYKQTPALVALRYQLQRGVVPLIRSFNAKRIKELT 281
Query: 309 AL-DFELSPEEVKAIENIPNKQKYC 332
+ +F+L+ E++KA++ + +Y
Sbjct: 282 QVFEFQLASEDMKALDGLNRNFRYN 306
Score = 81.4 bits (202), Expect = 1e-17
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSNP--------LIADSTLAQIAKVHS 52
VE H + Q +++D C I L +Y +LGS+ L+ D L IAK +
Sbjct: 191 VECHLYLNQS-KMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAKKYK 249
Query: 53 VSPAQVLLRWALQ 65
+PA V LR+ LQ
Sbjct: 250 QTPALVALRYQLQ 262
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic
tetrad, hepes, NADP, bIle catabolism, disease mutation,
lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens}
PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A*
3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Length = 326
Score = 254 bits (650), Expect = 3e-83
Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 34/265 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR ID A Y NE +G A++ + + ++REDIF KL + + V+ + +TL+
Sbjct: 49 YRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHV-PEMVRPTLERTLR 107
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLKS 208
L Y+DL++I P + D + + W A+ + G +KS
Sbjct: 108 VLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKD--AGLVKS 165
Query: 209 IGVSNYTAKHLVNLIQNS--KVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
+GVSN+ + L ++ K P NQVE HP+F QP +L+ C Q+ I + AY+ LG+
Sbjct: 166 LGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQP-KLLKFCQQHDIVITAYSPLGT 224
Query: 267 TS------------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNI 308
+ + K ++ + AQ++LR+ +Q ++IPKS ERI +N
Sbjct: 225 SRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENF 284
Query: 309 AL-DFELSPEEVKAIENIPNKQKYC 332
+ DF L+ EE+K IE + ++
Sbjct: 285 QIFDFSLTEEEMKDIEALNKNVRFV 309
Score = 81.8 bits (203), Expect = 9e-18
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 21/104 (20%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN--------PLIADSTLAQIAKVHS 52
VE HP+F QP +L+ C Q+ I + AY+ LG++ + PL+ D+ L + K ++
Sbjct: 194 VECHPYFTQP-KLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYN 252
Query: 53 VSPAQVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
+ AQ++LR+ +Q K S + R ++ENF
Sbjct: 253 KTAAQIVLRFNIQRGVVVIPK------SFNLE----R--IKENF 284
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase;
HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB:
1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A*
3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A*
1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Length = 331
Score = 253 bits (649), Expect = 7e-83
Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 34/265 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
+R ID+A Y NE +G A++ + ++KREDIF TSKL ++ + V+ + +LK
Sbjct: 46 FRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHR-PELVRPALENSLK 104
Query: 158 DLGTTYLDLFLIHWP-------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNGPLKS 208
Y+DL+LIH P D + W A+ + + G KS
Sbjct: 105 KAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKD--AGLAKS 162
Query: 209 IGVSNYTAKHLVNLIQNS--KVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
IGVSN+ + L ++ K P NQVE HP+F + +L+D C I L AY++LGS
Sbjct: 163 IGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRS-KLLDFCKSKDIVLVAYSALGS 221
Query: 267 TS------------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNI 308
+AK H +PA + LR+ LQ +++ KS +RI QN+
Sbjct: 222 QRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNV 281
Query: 309 AL-DFELSPEEVKAIENIPNKQKYC 332
+ +F+L+ E++KAI+ + Y
Sbjct: 282 QVFEFQLTAEDMKAIDGLDRNLHYF 306
Score = 81.1 bits (201), Expect = 1e-17
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGS--------TSSNPLIADSTLAQIAKVHS 52
VE HP+F + +L+D C I L AY++LGS +S L+ D L +AK H
Sbjct: 191 VECHPYFNRS-KLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHK 249
Query: 53 VSPAQVLLRWALQ 65
+PA + LR+ LQ
Sbjct: 250 RTPALIALRYQLQ 262
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university
of washingto niaid, oxidoreductase, S genomics; HET:
NAP; 1.75A {Giardia lamblia}
Length = 334
Score = 249 bits (638), Expect = 3e-81
Identities = 86/275 (31%), Positives = 125/275 (45%), Gaps = 42/275 (15%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFN--LKREDIFITSKLSPQYNGNADQVKSLVAQT 155
YR ID A Y NE +IGRA + + +KRED++ITSKL + + V+ +T
Sbjct: 52 YRHIDCAYVYQNEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHR-PELVREQCKKT 110
Query: 156 LKDLGTTYLDLFLIHWP---------GTFGVDSSSPQQISNRHTL--WNALTELYNPNNG 204
+ DL YLDLFL+HWP F D+ + W A+ +L G
Sbjct: 111 MSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVE--EG 168
Query: 205 PLKSIGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASL 264
+K IGVSNYT L +L+ +K+ P VNQ+E HP + C N I + AY+ +
Sbjct: 169 LVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPND-ATVKFCLDNGIGVTAYSPM 227
Query: 265 GSTS--------------------TQIAKVHSVSPAQVLLRWALQ----ENFLIIPKSVT 300
G + IA SP V L W ++ + +IPKS T
Sbjct: 228 GGSYADPRDPSGTQKNVILECKTLKAIADAKGTSPHCVALAWHVKKWNTSMYSVIPKSQT 287
Query: 301 PERIVQNIAL-DFELSPEEVKAIENIPNKQKYCWN 334
P RI N + +LS +++ AI NI ++ +
Sbjct: 288 PARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFC 322
Score = 81.5 bits (202), Expect = 1e-17
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 19/106 (17%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTSSN----------PLIADSTLAQIAKV 50
+E HP + C N I + AY+ +G + ++ ++ TL IA
Sbjct: 199 IEIHPWHPND-ATVKFCLDNGIGVTAYSPMGGSYADPRDPSGTQKNVILECKTLKAIADA 257
Query: 51 HSVSPAQVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF 96
SP V L W +++ + K S +PA R ++ NF
Sbjct: 258 KGTSPHCVALAWHVKKWNTSMYSVIPK--SQTPA----R--IEANF 295
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics,
joint center for structural genomics, JCSG, protein
structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A
{Mus musculus}
Length = 324
Score = 197 bits (503), Expect = 3e-61
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 98 YRAIDTAQEYGNEASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQVKSLVAQTLK 157
YR +DTA Y E IG+A++ + + RED+F+T+KL + V + +L
Sbjct: 47 YRHVDTAYAYQVEEEIGQAIQSXIXAGVVXREDLFVTTKLWCTCFR-PELVXPALEXSLX 105
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTL---------WNALTELYNPNNGPLKS 208
L Y+DL+++H+P + +L W L E + G + S
Sbjct: 106 XLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXD--AGLVXS 163
Query: 209 IGVSNYTAKHLVNLIQNSKVV--PAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGS 266
IGVSN+ + L ++ + P NQVE H + Q L+D C I L AY +LG+
Sbjct: 164 IGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLNQRX-LLDYCESXDIVLVAYGALGT 222
Query: 267 TS------------------TQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNI 308
+A + SPA + LR+ +Q + + +S + +N+
Sbjct: 223 QRYXEWVDQNSPVLLNDPVLCDVAXXNXRSPALIALRYLIQRGIVPLAQSFXENEMRENL 282
Query: 309 AL-DFELSPEEVKAIENIPNKQKYC 332
+ F+LSPE++ ++ + +Y
Sbjct: 283 QVFGFQLSPEDMXTLDGLNXNFRYL 307
Score = 63.8 bits (155), Expect = 1e-11
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 1 VEFHPHFLQPQELIDVCNQNKIALQAYASLGSTS--------SNPLIADSTLAQIAKVHS 52
VE H + Q L+D C I L AY +LG+ S L+ D L +A +
Sbjct: 192 VECHLYLNQRX-LLDYCESXDIVLVAYGALGTQRYXEWVDQNSPVLLNDPVLCDVAXXNX 250
Query: 53 VSPAQVLLRWALQ 65
SPA + LR+ +Q
Sbjct: 251 RSPALIALRYLIQ 263
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto
reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB:
1og6_A*
Length = 319
Score = 110 bits (278), Expect = 3e-28
Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 52/258 (20%)
Query: 101 IDTAQEYG---NEASIGRALKVLLPKFNLKREDIFITSK-----------LSPQYNGNAD 146
+D A YG EA+ G ALK RE + I SK + Y + D
Sbjct: 70 VDHADIYGGYQCEAAFGEALK----LAPHLRERMEIVSKCGIATTAREENVIGHYITDRD 125
Query: 147 QVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPL 206
+ Q+L +L T +LDL LIH P +D ++++ A L+ +G +
Sbjct: 126 HIIKSAEQSLINLATDHLDLLLIHRPDPL-MD---ADEVAD------AFKHLHQ--SGKV 173
Query: 207 KSIGVSNYTAKHLVNLIQNSKVVPAV-NQVEFHPHFLQP--QELIDVCNQNKIALQAYAS 263
+ GVSN+T L+Q+ NQVE P +D Q ++ A++
Sbjct: 174 RHFGVSNFTPAQF-ALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSC 232
Query: 264 LG--------------STSTQIA-KVHSVSPAQVLLRWALQ--ENFLIIPKSVTPERIVQ 306
LG +A ++++ S QV+ W L+ L I S ER+
Sbjct: 233 LGGGRLFNDDYFQPLRDELAVVAEELNAGSIEQVVNAWVLRLPSQPLPIIGSGKIERVRA 292
Query: 307 NI-ALDFELSPEEVKAIE 323
+ A +++ ++ I
Sbjct: 293 AVEAETLKMTRQQWFRIR 310
Score = 36.8 bits (86), Expect = 0.007
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Query: 1 VEFHPHFLQP--QELIDVCNQNKIALQAYASLG-----STSSNPLIADSTLAQIA-KVHS 52
VE P +D Q ++ A++ LG + + D LA +A ++++
Sbjct: 202 VEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRD-ELAVVAEELNA 260
Query: 53 VSPAQVLLRWALQ 65
S QV+ W L+
Sbjct: 261 GSIEQVVNAWVLR 273
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel,
oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1
PDB: 1pz0_A*
Length = 312
Score = 99.9 bits (250), Expect = 3e-24
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 90/299 (30%)
Query: 87 LLRWALQE--NFCYRAIDTAQEYG---NEASIGRALKVLLPKFNLKREDIFITSKLS--- 138
L+R A++ +DTA YG +E IG L+ RED+ I +K +
Sbjct: 40 LVREAIRNGVTM----LDTAYIYGIGRSEELIGEVLR------EFNREDVVIATKAAHRK 89
Query: 139 ----PQYNGNADQVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNA 194
++ + D +K V ++LK L T Y+DLF IH+ D +P+ + NA
Sbjct: 90 QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHF-----PDEHTPKDEA-----VNA 139
Query: 195 LTELYNPNNGPLKSIGVSNYTAK-----HLVNLIQNSKVVP-AVNQVEFHPHFLQP-QEL 247
L E+ G ++SIGVSN++ + + K V Q E++ + +
Sbjct: 140 LNEMK--KAGKIRSIGVSNFSLEQLKEAN--------KDGLVDVLQGEYNLLNREAEKTF 189
Query: 248 IDVCNQNKIALQAYASLGS---TST----------------------------------- 269
++ I+ Y L S
Sbjct: 190 FPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLA 249
Query: 270 QIAKVHSVSPAQVLLRWALQ--ENFLIIPKSVTPERIVQNI-ALDFELSPEEVKAIENI 325
IA+ H+V ++L W L E ++IP + ++++ NI D LS E++ I+ +
Sbjct: 250 PIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKL 308
Score = 35.6 bits (83), Expect = 0.019
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 28/83 (33%)
Query: 11 QELIDVCNQNKIALQAYASLGS-------TSSNPLIADS--------------------- 42
+ ++ I+ Y L S T
Sbjct: 187 KTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVN 246
Query: 43 TLAQIAKVHSVSPAQVLLRWALQ 65
LA IA+ H+V ++L W L
Sbjct: 247 KLAPIAEKHNVDIPHIVLAWYLA 269
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR,
AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans}
Length = 348
Score = 99 bits (250), Expect = 4e-24
Identities = 53/276 (19%), Positives = 101/276 (36%), Gaps = 67/276 (24%)
Query: 101 IDTAQEYG---NEASIGRALK------VLLPKFNLKREDIFITSKLSPQYNGNADQVKSL 151
IDTA YG +E +GRAL + K L + + +++
Sbjct: 69 IDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNM-KVFRDSRPARIRKE 127
Query: 152 VAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGV 211
V +L+ L +DL IHWP D +P S L +L+ +G ++++GV
Sbjct: 128 VEDSLRRLRVETIDLEQIHWP-----DDKTPIDES-----ARELQKLH--QDGKIRALGV 175
Query: 212 SNYTAKHLVNLIQNSKVVP-AVNQVEFHPHFLQP-QELIDVCNQNKIALQAYASLGS--- 266
SN++ + + +V P A Q + ++++ ++ + AY +L
Sbjct: 176 SNFSPEQMD---IFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLAYGALCRGLL 232
Query: 267 TST-----------------------------------QIAKVHSVSPAQVLLRWALQEN 291
T ++A+ S +RW L +
Sbjct: 233 TGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMDEFEKLAEKRGKSVMAFAVRWVLDQG 292
Query: 292 FLI-IPKSVTPERIVQNI-ALDFELSPEEVKAIENI 325
+I + + P ++ + L+ EE KA+++I
Sbjct: 293 PVIALWGARKPGQVSGVKDVFGWSLTDEEKKAVDDI 328
Score = 35.2 bits (82), Expect = 0.024
Identities = 9/83 (10%), Positives = 21/83 (25%), Gaps = 28/83 (33%)
Query: 11 QELIDVCNQNKIALQAYASLGS-------TSSNPLIAD---------------------S 42
++++ ++ + AY +L D
Sbjct: 208 KDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPKDDLRSNDPKFQKPNFEKYLAAMD 267
Query: 43 TLAQIAKVHSVSPAQVLLRWALQ 65
++A+ S +RW L
Sbjct: 268 EFEKLAEKRGKSVMAFAVRWVLD 290
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto
reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A
{Bacillus subtilis} SCOP: c.1.7.1
Length = 333
Score = 90.7 bits (226), Expect = 6e-21
Identities = 59/289 (20%), Positives = 100/289 (34%), Gaps = 94/289 (32%)
Query: 101 IDTAQEYG---NEASIGRALK--------VLLPKFNLKREDIFITSKLSPQYNGNADQVK 149
IDTA YG +E +G+A+K +L K L ++ + + +
Sbjct: 51 IDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRAR------IV 104
Query: 150 SLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSI 209
V +LK L T Y+DL+ +HWP D P + + + ELY + G +++I
Sbjct: 105 EEVENSLKRLQTDYIDLYQVHWP-----DPLVPIEET-----AEVMKELY--DAGKIRAI 152
Query: 210 GVSNYTAKHLVNLIQNSKVVPAVNQVEFHP-HFLQP----------QELIDVCNQNKIAL 258
GVSN++ + + V P H +QP + ++ NKI
Sbjct: 153 GVSNFSIEQMD----------TFRAV--APLHTIQPPYNLFEREMEESVLPYAKDNKITT 200
Query: 259 QAYASLGS-------TSTQ-------------------------------IAKV-HSVSP 279
Y SL T +AK + S
Sbjct: 201 LLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTRYGKSV 260
Query: 280 AQVLLRWALQENFLI--IPKSVTPERIVQNI-ALDFELSPEEVKAIENI 325
+ +RW L + + + P ++ + L+ E+ K I I
Sbjct: 261 IHLAVRWILDQPGADIALWGARKPGQLEALSEITGWTLNSEDQKDINTI 309
Score = 31.0 bits (71), Expect = 0.47
Identities = 15/84 (17%), Positives = 23/84 (27%), Gaps = 29/84 (34%)
Query: 11 QELIDVCNQNKIALQAYASLGS-------TSSNPLIADS--------------------- 42
+ ++ NKI Y SL T D
Sbjct: 187 ESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVN 246
Query: 43 TLAQIAKV-HSVSPAQVLLRWALQ 65
L ++AK + S + +RW L
Sbjct: 247 QLDKLAKTRYGKSVIHLAVRWILD 270
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L
MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A
3v0t_A* 3uyi_A*
Length = 337
Score = 85.0 bits (210), Expect = 8e-19
Identities = 62/279 (22%), Positives = 106/279 (37%), Gaps = 75/279 (26%)
Query: 101 IDTAQEYG----NEASIGRALKVLLPKFNLKREDIFITSKL--------SPQYNGNADQV 148
DT+ YG NE +G+ALK L RE I + +K + G D V
Sbjct: 51 FDTSDIYGENGSNEELLGKALK------QLPREXIQVGTKFGIHEIGFSGVKAXGTPDYV 104
Query: 149 KSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKS 208
+S +LK L Y+DLF IH +D++ P +I+ L L G +
Sbjct: 105 RSCCEASLKRLDVDYIDLFYIHR-----IDTTVPIEIT-----MGELXXLV--EEGKIXY 152
Query: 209 IGVSNYTAKHLVNLIQNSKVVP-AVNQVEFHPHFLQPQ-ELIDVCNQNKIALQAYASLG- 265
+G+S + + + V P Q+E+ + E++ +C Q I + Y+ +G
Sbjct: 153 VGLSEASPD---TIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGR 209
Query: 266 ------------------------------------STSTQIAKVHSVSPAQVLLRWAL- 288
+++ H +P Q+ L W L
Sbjct: 210 GLFWGKAIKESLPENSVLTSHPRFVGENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLH 269
Query: 289 QENFLI-IPKSVTPERIVQNI-ALDFELSPEEVKAIENI 325
Q ++ IP + + + N+ AL L+ E++K I +
Sbjct: 270 QGEDVVPIPGTTKIKNLHNNVGALKVXLTKEDLKEISDA 308
Score = 30.6 bits (69), Expect = 0.70
Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 1 VEFHPHFLQPQ-ELIDVCNQNKIALQAYASLGSTSSNPLIADSTLAQIAKVHSVSPAQVL 59
+E+ + E++ +C Q I + Y+ +G +L + V + P
Sbjct: 177 IEYSLWTRDIEDEIVPLCRQLGIGIVPYSPIGRGLFWGKAIKESLPE-NSVLTSHP---- 231
Query: 60 LRWALQENFCKFIKLYHKV------HSVSPAQVLLRWALQ 93
R+ EN K ++Y+++ H +P Q+ L W L
Sbjct: 232 -RFV-GENLEKNKQIYYRIEALSQKHGCTPVQLALAWVLH 269
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 77.2 bits (189), Expect = 1e-15
Identities = 59/362 (16%), Positives = 111/362 (30%), Gaps = 94/362 (25%)
Query: 4 HPHFLQPQELI--DVCNQNKIALQAYASLGS----TSSNPLIADSTLAQIAKVHSVSPA- 56
+ + L L+ +V N A A+ +L T+ + D A S+
Sbjct: 243 YENCL----LVLLNVQNAK--AWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 57 ---------QVLLRWALQENFCKFIKLYHKVHSVSPAQVLLRWALQENFCYRAIDTAQEY 107
+LL++ C+ L +V + +P ++ + + D +
Sbjct: 296 MTLTPDEVKSLLLKYLD----CRPQDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHV 350
Query: 108 GNEA---SIGRALKVLLP--------KFNLKREDIFITSKL-----------SPQYNGNA 145
+ I +L VL P + ++ I + L N
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 146 DQVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYN----- 200
SLV + K+ + ++L ++ N + L ++ + YN
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYL-----------ELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 201 PNNGPLKSIGVSNY----TAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKI 256
++ + + Y HL N I++ + + V FL + KI
Sbjct: 460 DSDDLIPPY-LDQYFYSHIGHHLKN-IEHPERMTLFRMVFLDFRFL----------EQKI 507
Query: 257 ALQAYASLGSTSTQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIALDFELSP 316
+ A S S L + + + I ER+V I LDF
Sbjct: 508 RHDSTAWNASGSI----------LNTLQQLKFYKPY-ICDNDPKYERLVNAI-LDFLPKI 555
Query: 317 EE 318
EE
Sbjct: 556 EE 557
Score = 58.3 bits (140), Expect = 1e-09
Identities = 40/311 (12%), Positives = 88/311 (28%), Gaps = 73/311 (23%)
Query: 59 LLRWALQENFCKFIKLYHKVHSVSPAQVLLRWAL---QENFCYRAIDTA--QEYG----- 108
+ + L + I +VS L W L QE + ++ Y
Sbjct: 41 MPKSILSKEEIDHI--IMSKDAVSGTLRLF-WTLLSKQEEMVQKFVEEVLRINYKFLMSP 97
Query: 109 -NEASIGRALK---------------VLLPKFNLKREDIFIT-----SKLSPQYN----- 142
++ + K+N+ R ++ +L P N
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 143 ----GNADQVKS-LVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTE 197
G K+ + F I W +S + L +
Sbjct: 158 VLGSG-----KTWVALDVCLSYKVQCKMDFKIFWL-NLKNCNSPETVLEMLQKLLYQIDP 211
Query: 198 LYNPNNGPLKSIGVSNYTAK-HLVNLIQNSKVVPAVNQVEFHPHFLQPQELI--DVCNQN 254
+ + +I + ++ + L L+++ + + L L+ +V N
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKP----------YENCL----LVLLNVQNAK 257
Query: 255 KIALQAYASLGST---STQIAKVHSVSPAQVLLRWALQENFLIIPKSVTPERIVQNIALD 311
A A+ +L +T+ +V A +L + + + +++ +
Sbjct: 258 --AWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314
Query: 312 FELSPEEVKAI 322
+ P EV
Sbjct: 315 PQDLPREVLTT 325
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC;
1.25A {Bacillus halodurans} PDB: 1ynq_A*
Length = 317
Score = 75.3 bits (186), Expect = 1e-15
Identities = 47/275 (17%), Positives = 102/275 (37%), Gaps = 75/275 (27%)
Query: 95 NFCYRAIDTAQEYG---NEASIGRALKVLLPKFNLKREDIFITSK--------------- 136
N+ +DTA Y NE +G+ALK +R+DI + +K
Sbjct: 63 NY----LDTADLYNQGLNEQFVGKALKG-------RRQDIILATKVGNRFEQGKEGWWWD 111
Query: 137 LSPQYNGNADQVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALT 196
S Y +K V +L+ L T Y+DL+ +H G P T+ A
Sbjct: 112 PSKAY------IKEAVKDSLRRLQTDYIDLYQLH-----GGTIDDPID----ETI-EAFE 155
Query: 197 ELYNPNNGPLKSIGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKI 256
EL G ++ G+S+ + ++ S +V +++ +P+E + ++ +
Sbjct: 156 ELK--QEGVIRYYGISSIRPNVIKEYLKRSNIV--SIMMQYSILDRRPEEWFPLIQEHGV 211
Query: 257 ALQAYASLGS----------------------TSTQIAKVHSVSPAQVLLRWALQENFLI 294
++ + + + ++ L++ L + +
Sbjct: 212 SVVVRGPVARGLLSRRPLPEGEGYLNYRYDELKLLRESLPTDRPLHELALQYCLAHDVVA 271
Query: 295 --IPKSVTPERIVQNI-ALDFE-LSPEEVKAIENI 325
+ + +++ N+ A++ L+ EE + I+ +
Sbjct: 272 TVAAGASSIDQVKANVQAVEATPLTAEERQHIQKL 306
Score = 28.7 bits (65), Expect = 2.6
Identities = 6/68 (8%), Positives = 21/68 (30%), Gaps = 12/68 (17%)
Query: 10 PQELIDVCNQNKIALQAYASLG------------STSSNPLIADSTLAQIAKVHSVSPAQ 57
P+E + ++ +++ + N + L + + +
Sbjct: 199 PEEWFPLIQEHGVSVVVRGPVARGLLSRRPLPEGEGYLNYRYDELKLLRESLPTDRPLHE 258
Query: 58 VLLRWALQ 65
+ L++ L
Sbjct: 259 LALQYCLA 266
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone,
NADPH, cytoplasm, ION transport, ionic channel, NADP,
phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus}
SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A*
3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Length = 327
Score = 73.0 bits (180), Expect = 1e-14
Identities = 49/294 (16%), Positives = 106/294 (36%), Gaps = 92/294 (31%)
Query: 101 IDTAQEYGN---EASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQV---KSLVA- 153
DTA+ Y E +G +K K +R + IT+K+ ++ K ++
Sbjct: 50 FDTAEVYAAGKAEVVLGNIIK----KKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEG 105
Query: 154 --QTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGV 211
+L+ L Y+D+ + P D ++P + T+ A+T + N G G
Sbjct: 106 LKASLERLQLEYVDVVFANRP-----DPNTPME----ETVR-AMTHVI--NQGMAMYWGT 153
Query: 212 SNYTAKHLVNLIQNSK----VVPAVNQVE---FHPHFLQPQELIDVCNQNKIALQAYASL 264
S +++ ++ ++ + P Q E F ++ +L ++ ++ + ++ L
Sbjct: 154 SRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVE-VQLPELFHKIGVGAMTWSPL 212
Query: 265 ---------------GSTSTQ---------------------------IAKVHSVSPAQV 282
S ++ IA+ + Q+
Sbjct: 213 ACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQL 272
Query: 283 LLRWALQENFLIIPKSVT--------PERIVQNI-ALDF--ELSPEEVKAIENI 325
+ W L+ + V+ E++++NI A+ +LS V I++I
Sbjct: 273 AIAWCLRN------EGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 320
>3erp_A Putative oxidoreductase; funded by the national institute of
allergy and infectious D of NIH contract number
HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Length = 353
Score = 73.0 bits (180), Expect = 1e-14
Identities = 58/297 (19%), Positives = 95/297 (31%), Gaps = 101/297 (34%)
Query: 101 IDTAQEYGN-----EASIGRALKVLLPKFNLKREDIFITSKL----SPQYNGNADQVKSL 151
D A YG E + GR L+ R+++ I++K G+ K L
Sbjct: 81 FDLANNYGPPPGSAECNFGRILQEDFLP---WRDELIISTKAGYTMWDGPYGDWGSRKYL 137
Query: 152 VA---QTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKS 208
+A Q+LK +G Y+D+F H P D +P + T+ AL L +G
Sbjct: 138 IASLDQSLKRMGLEYVDIFYHHRP-----DPETPLK----ETMK-ALDHLV--RHGKALY 185
Query: 209 IGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFL--QPQ----------ELIDVCNQNKI 256
+G+SNY A I + + L QP+ L+ + + +
Sbjct: 186 VGISNYPADLARQAIDILE--------DLGTPCLIHQPKYSLFERWVEDGLLALLQEKGV 237
Query: 257 ALQAYASL---------------GSTSTQ-----------------------IAKVHSVS 278
A++ L S + +A
Sbjct: 238 GSIAFSPLAGGQLTDRYLNGIPEDSRAASGSRFLKPEQITADKLEKVRRLNELAARRGQK 297
Query: 279 PAQVLLRWALQENFLIIPKSVT--------PERIVQNI-ALDF-ELSPEEVKAIENI 325
+Q+ L W L+ +VT P +I + L S E I+ I
Sbjct: 298 LSQMALAWVLRN------DNVTSVLIGASKPSQIEDAVGMLANRRFSAAECAEIDAI 348
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A
{Escherichia coli}
Length = 346
Score = 70.3 bits (173), Expect = 1e-13
Identities = 60/294 (20%), Positives = 106/294 (36%), Gaps = 91/294 (30%)
Query: 101 IDTAQEYGN-----EASIGRALKVLLPKFNLKREDIFITSKL----SPQYNGNADQVKSL 151
D A YG E + GR L+ F R+++ I++K P G+ K L
Sbjct: 60 FDLANNYGPPPGSAEENFGRLLR---EDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYL 116
Query: 152 VA---QTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKS 208
+A Q+LK +G Y+D+F H D ++P + T AL +G
Sbjct: 117 LASLDQSLKRMGLEYVDIFYSHRV-----DENTPME----ETAS-ALAHAV--QSGKALY 164
Query: 209 IGVSNYTAKHL---VNLIQNSKVVPAVNQVE---FHPHFLQPQELIDVCNQNKIALQAYA 262
+G+S+Y+ + V L++ K+ ++Q + + L+D N + A+
Sbjct: 165 VGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRW-VDKSGLLDTLQNNGVGCIAFT 223
Query: 263 SL---------------GSTSTQ--------------------------IAKVHSVSPAQ 281
L S + +A+ S AQ
Sbjct: 224 PLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQRGQSMAQ 283
Query: 282 VLLRWALQENFLIIPKSVT--------PERIVQNI-ALDF-ELSPEEVKAIENI 325
+ L W L++ VT E++ +N+ AL+ S +E+ I+
Sbjct: 284 MALSWLLKD------DRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQH 331
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating,
potassium channel, KV1.2, gating charges, no analysis,
ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Length = 367
Score = 69.6 bits (171), Expect = 2e-13
Identities = 49/294 (16%), Positives = 106/294 (36%), Gaps = 92/294 (31%)
Query: 101 IDTAQEYGN---EASIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQV---KSLVA- 153
DTA+ Y E +G +K K +R + IT+K+ ++ K ++
Sbjct: 84 FDTAEVYAAGKAEVVLGNIIK----KKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEG 139
Query: 154 --QTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPLKSIGV 211
+L+ L Y+D+ + P D ++P + T+ A+T + N G G
Sbjct: 140 LKASLERLQLEYVDVVFANRP-----DPNTPME----ETVR-AMTHVI--NQGMAMYWGT 187
Query: 212 SNYTAKHLVNLIQNSK----VVPAVNQVE---FHPHFLQPQELIDVCNQNKIALQAYASL 264
S +++ ++ ++ + P Q E F ++ +L ++ ++ + ++ L
Sbjct: 188 SRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVE-VQLPELFHKIGVGAMTWSPL 246
Query: 265 ---------------GSTSTQ---------------------------IAKVHSVSPAQV 282
S ++ IA+ + Q+
Sbjct: 247 ACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQL 306
Query: 283 LLRWALQENFLIIPKSVT--------PERIVQNI-ALDF--ELSPEEVKAIENI 325
+ W L+ + V+ E++++NI A+ +LS V I++I
Sbjct: 307 AIAWCLRN------EGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSI 354
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F,
structural GE oxidoreductase; HET: NDP; 1.60A
{Escherichia coli} SCOP: c.1.7.1
Length = 346
Score = 69.5 bits (171), Expect = 2e-13
Identities = 65/313 (20%), Positives = 110/313 (35%), Gaps = 102/313 (32%)
Query: 95 NFCYRAIDTA---------QEYGN-EASIGRALKVLLPKFNLKREDIFITSKLS------ 138
N ID A + G E +G L + RE + I SK+S
Sbjct: 45 NL----IDVAEMYPVPPRPETQGLTETYVGNWLAK-----HGSREKLIIASKVSGPSRNN 95
Query: 139 PQYNGN-----ADQVKSLVAQTLKDLGTTYLDLFLIHWP-------GTFGVDSSSPQQIS 186
+ ++ + +LK L T YLDL+ +HWP G G +
Sbjct: 96 DKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAV 155
Query: 187 NRHTLWNALTELYNPNNGPLKSIGVSNYTAKHLVNLIQNSKV--VPAVNQVEFHPHFLQP 244
+ +AL E G ++ IGVSN TA ++ + + +P + + Q
Sbjct: 156 SLLDTLDALAEYQ--RAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTI-------QN 206
Query: 245 Q----------ELIDVCNQNKIALQAYASL----------------GSTST--------- 269
L +V + L AY+ L G+ +T
Sbjct: 207 PYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYS 266
Query: 270 ------------QIAKVHSVSPAQVLLRWALQENFL---II-PKSVTPERIVQNI-ALDF 312
IA+ H + PAQ+ L + ++ F+ ++ T +++ NI +L
Sbjct: 267 GEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGAT--TMDQLKTNIESLHL 324
Query: 313 ELSPEEVKAIENI 325
ELS + + IE +
Sbjct: 325 ELSEDVLAEIEAV 337
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto
reductase, succinic semialdehyde oxidoreductase, AKR7
family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP:
c.1.7.1 PDB: 2clp_A* 2c91_A*
Length = 327
Score = 65.7 bits (161), Expect = 3e-12
Identities = 55/319 (17%), Positives = 92/319 (28%), Gaps = 105/319 (32%)
Query: 84 AQVLLRWALQE--NFCYRAIDTAQEYGN---EASIGRALKVLLPKFNLKREDIFITSKLS 138
+ +R LQ IDTA Y N E +G + I +K +
Sbjct: 24 SSASVRAFLQRGHTE----IDTAFVYANGQSETILGDLGL----GLGRSGCKVKIATKAA 75
Query: 139 PQYNG--NADQVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALT 196
P + V+ + +LK L +DLF +H+P D +P + TL A
Sbjct: 76 PMFGKTLKPADVRFQLETSLKRLQCPRVDLFYLHFP-----DHGTPIE----ETL-QACH 125
Query: 197 ELYNPNNGPLKSIGVSNYTAKHLVNLIQNSK----VVPAVNQ---------VEFHPHFLQ 243
+L+ G +G+SNY + + + K ++P V Q VE
Sbjct: 126 QLH--QEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQVE------- 176
Query: 244 PQELIDVCNQNKIALQAYASLGS------------------------------------- 266
EL + A+ L
Sbjct: 177 -TELFPCLRHFGLRFYAFNPLAGGLLTGRYKYQDKDGKNPESRFFGNPFSQLYMDRYWKE 235
Query: 267 -----------TSTQIAKVHSVSPAQVLLRWALQENFLIIPKSV-------TPERIVQNI 308
+ S +RW + L + + E++ QN+
Sbjct: 236 EHFNGIALVEKALKTTYGPTAPSMISAAVRWMYHHSQLKGTQGDAVILGMSSLEQLEQNL 295
Query: 309 -ALDF-ELSPEEVKAIENI 325
++ L P V A +
Sbjct: 296 ALVEEGPLEPAVVDAFDQA 314
Score = 30.3 bits (69), Expect = 0.86
Identities = 4/22 (18%), Positives = 6/22 (27%)
Query: 44 LAQIAKVHSVSPAQVLLRWALQ 65
L + S +RW
Sbjct: 248 LKTTYGPTAPSMISAAVRWMYH 269
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto
reductase family 7, SSA reductase, barrel; HET: FLC NDP;
2.4A {Homo sapiens}
Length = 360
Score = 61.9 bits (151), Expect = 6e-11
Identities = 56/324 (17%), Positives = 88/324 (27%), Gaps = 115/324 (35%)
Query: 84 AQVLLRWALQE--NFCYRAIDTAQEYGN---EASIGRALKVLLPKFNLKREDIFITSKLS 138
+ +R L+ +DTA Y + E +G + I +K +
Sbjct: 57 SAAAVRAFLERGHTE----LDTAFMYSDGQSETILGGLGL----GLGGGDCRVKIATKAN 108
Query: 139 PQYNGN---ADQVKSLVAQTLKDLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHT----L 191
P +G D V+S + +LK L +DLF +H P D T
Sbjct: 109 PW-DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAP-----D---------HGTPVEET 153
Query: 192 WNALTELYNPNNGPLKSIGVSNYTAKHLVNLIQNSK----VVPAVNQ---------VEFH 238
+A L+ G +G+SNY + + + K ++P V Q VE
Sbjct: 154 LHACQRLH--QEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVE-- 209
Query: 239 PHFLQPQELIDVCNQNKIALQAYASLGS-------------------------------- 266
EL + AY L
Sbjct: 210 ------TELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYRN 263
Query: 267 ----------------TSTQIAKVHSVSPAQVLLRWALQENFLIIPKSV-------TPER 303
+ S LRW + L + E+
Sbjct: 264 RFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQ 323
Query: 304 IVQNI-ALD-FELSPEEVKAIENI 325
+ QN+ A + L P V A
Sbjct: 324 LEQNLAATEEGPLEPAVVDAFNQA 347
Score = 30.3 bits (69), Expect = 0.98
Identities = 5/22 (22%), Positives = 6/22 (27%)
Query: 44 LAQIAKVHSVSPAQVLLRWALQ 65
L + S LRW
Sbjct: 281 LQAAYGASAPSVTSAALRWMYH 302
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.4 bits (112), Expect = 5e-06
Identities = 65/389 (16%), Positives = 119/389 (30%), Gaps = 137/389 (35%)
Query: 3 FHPHFLQPQELIDVCNQNKIALQAY-ASLGSTSSNPLIADSTLAQIAKVHSVSPAQVLLR 61
L E ++ N + + Y S S PLI + Q+A
Sbjct: 208 VFTQGLNILEWLE--NPSNTPDKDYLLS--IPISCPLI---GVIQLA------------- 247
Query: 62 WALQENFCKFIKLYHKVHSVSPAQVL--LRWALQENFCYRAI---------DTAQEYGNE 110
++ K+ +P ++ L+ A + + D+ + +
Sbjct: 248 -----HYVVT----AKLLGFTPGELRSYLKGATG---HSQGLVTAVAIAETDSWESFFVS 295
Query: 111 ASIGRALKVLLPKF--NLKREDIFITSKLSPQ------YNGNAD-----QVKSLVAQTLK 157
+A+ VL F ++ + + + L P N + +L + ++
Sbjct: 296 VR--KAITVL---FFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQ 350
Query: 158 DLGTTYLDLFLIHWPGTFGVDSSSPQQISNRHTLWNALTELYN-PNN----GPLKSIGVS 212
D Y++ H P V +IS L N N GP +S+
Sbjct: 351 D----YVNKTNSHLPAGKQV------EIS-----------LVNGAKNLVVSGPPQSL--- 386
Query: 213 NYTAKHLVNLIQNSKVVPAVNQ--------------------VEFHPHFLQP-QELI--D 249
L ++ +K ++Q FH H L P +LI D
Sbjct: 387 ----YGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKD 442
Query: 250 VCNQNKIALQAYASLG----STSTQI-AKVHSVSPAQVLLRWALQENFLIIPKSVTPERI 304
+ N ++ A + T +V S S ++ ++ II V E
Sbjct: 443 LVKNN-VSFNA-KDIQIPVYDTFDGSDLRVLSGSISERIVDC-------IIRLPVKWETT 493
Query: 305 VQNIA---LDFELSPEEVKAIENIPNKQK 330
Q A LDF P + + ++ K
Sbjct: 494 TQFKATHILDF--GPGGASGLGVLTHRNK 520
Score = 45.8 bits (108), Expect = 2e-05
Identities = 49/280 (17%), Positives = 82/280 (29%), Gaps = 96/280 (34%)
Query: 79 HSVS-PAQVLLRWA-LQENFCYRAIDTAQEYG--NEASIGRALKVLLPKFNLKREDIFIT 134
H + P + LQE F + + + +E + L+ KF L +++
Sbjct: 18 HVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPT---TPAELVGKF-LG----YVS 69
Query: 135 SKLSPQYNGNADQVKSLVAQTLKDLGTTYL---DLFLIH---------WPGT-------- 174
S + P G DQV +L L + YL D IH T
Sbjct: 70 SLVEPSKVGQFDQVLNLC---LTEFENCYLEGND---IHALAAKLLQENDTTLVKTKELI 123
Query: 175 ---FGVDSSSPQQISNRHT--LWNA---------------------LTEL------YNPN 202
+ + + L+ A EL Y+
Sbjct: 124 KNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVL 183
Query: 203 NGPLKSIGVSNYTAKHLVNLIQNSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAY- 261
G L I S A+ L LI+ + + L E ++ N + + Y
Sbjct: 184 VGDL--IKFS---AETLSELIRTTLDAE-----KVFTQGLNILEWLE--NPSNTPDKDYL 231
Query: 262 ----ASL-GSTSTQIA------KVHSVSPAQVL--LRWAL 288
S Q+A K+ +P ++ L+ A
Sbjct: 232 LSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGAT 271
Score = 33.5 bits (76), Expect = 0.11
Identities = 39/228 (17%), Positives = 64/228 (28%), Gaps = 95/228 (41%)
Query: 170 HWPGTFGVDSSSPQQISNRHTLWNALTELYNPNNGPL-KSIGVSNYTA----KHLVNLIQ 224
H+ T+G S I N L G K I NY+A + ++
Sbjct: 1652 HFKDTYGF---SILDIVI-----NNPVNLTIHFGGEKGKRIR-ENYSAMIFETIVDGKLK 1702
Query: 225 NSKVVPAVNQVEFHPHFLQPQELIDVCNQNKIALQAYASLGSTS-TQIA---------KV 274
K+ +N+ F + L L +T TQ A +
Sbjct: 1703 TEKIFKEINEHSTSYTFRSEKGL----------------LSATQFTQPALTLMEKAAFED 1746
Query: 275 ---------------HS-------VSPAQVL----------LR-WALQE----------N 291
HS S A V+ R +Q N
Sbjct: 1747 LKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSN 1806
Query: 292 FLIIPKSVTPERIVQNI---ALDF---ELSPEEVKAIE----NIPNKQ 329
+ +I ++ P R+ + AL + + +E N+ N+Q
Sbjct: 1807 YGMI--AINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQ 1852
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.6 bits (73), Expect = 0.088
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Query: 183 QQISNRHTLWNALTELYNPNNGPLKSIGVS 212
Q + L +L +LY ++ P +I +
Sbjct: 20 QALKK---LQASL-KLYADDSAPALAIKAT 45
Score = 27.2 bits (59), Expect = 5.7
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 13/39 (33%)
Query: 9 QPQELIDVCNQNKI--ALQAYASLGSTSSNPLIA-DSTL 44
+ Q L K+ +L+ YA S P +A +T+
Sbjct: 18 EKQAL------KKLQASLKLYAD----DSAPALAIKATM 46
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE;
1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Length = 346
Score = 30.0 bits (68), Expect = 1.1
Identities = 8/39 (20%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 237 FHPHFLQPQELIDVCNQNKIALQAYASLGSTSTQIAKVH 275
+ +Q ++I++ ++ ++LQ A G + T+ V
Sbjct: 254 VDRNLVQ--KIIEIAKKHNVSLQEEAVGGRSGTETDFVQ 290
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural
genomics/proteomics initiative RSGI, structural
genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2
PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A
Length = 157
Score = 28.8 bits (65), Expect = 1.7
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 8/35 (22%)
Query: 299 VTPERIVQNIALDF----ELSPEEVKAIENIPNKQ 329
V + V L + S EE++ IE + N++
Sbjct: 35 VKGNKGV----LIVKFDRKPSDEEIREIERLANEK 65
>2b6c_A Hypothetical protein EF3068; structural genomis, DNA repair enzyme,
structural genomics, protein structure initiative; HET:
SO4; 2.10A {Enterococcus faecalis} SCOP: a.118.1.17
Length = 220
Score = 29.0 bits (64), Expect = 2.0
Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Query: 62 WALQENFCKFIKLYHKVHSVSPAQVLLRWALQENF--CYRAIDTAQEYGNEASIGRALKV 119
W + + KF + +H + + ENF A++ + + K
Sbjct: 104 WDSVDAWRKFFGSWVALHLTELPTIFALFYGAENFWNRRVALNLQLMLKEKTNQDLLKKA 163
Query: 120 LLPKFNLKREDIFI 133
++ + E+ FI
Sbjct: 164 IIY--DRTTEEFFI 175
>2ztg_A Alanyl-tRNA synthetase; class-II aminoacyl-tRNA synthetase,
aminoacyl-tRNA synthetase, ATP-binding, cytoplasm,
ligase; HET: A5A; 2.20A {Archaeoglobus fulgidus}
Length = 739
Score = 28.0 bits (63), Expect = 5.9
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 8/35 (22%)
Query: 299 VTPERIVQNIALDF----ELSPEEVKAIENIPNKQ 329
+ LD S EE+K IE + N++
Sbjct: 625 KEFSKA----RLDVTHFRRPSEEEIKEIEMLANRE 655
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase,
protein structure initiative; 2.00A {Clostridium
perfringens}
Length = 241
Score = 27.1 bits (61), Expect = 8.2
Identities = 5/33 (15%), Positives = 11/33 (33%), Gaps = 6/33 (18%)
Query: 299 VTPERIVQNIALDF--ELSPEEVKAIENIPNKQ 329
+ E +D L + ++ E N+
Sbjct: 121 LGKEIST----VDIVGFLDEKTIREAEKEANRL 149
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S
specificity, metallopeptidase M42, hydrolas; 2.70A
{Streptococcus pneumoniae}
Length = 355
Score = 27.3 bits (61), Expect = 8.2
Identities = 7/30 (23%), Positives = 9/30 (30%), Gaps = 2/30 (6%)
Query: 4 HPHFLQPQELIDVCNQNKIALQAYASLGST 33
P L+ + I Q Y G T
Sbjct: 267 LPGMKD--FLLTTAEEAGIKYQYYCGKGGT 294
Score = 27.3 bits (61), Expect = 8.2
Identities = 7/30 (23%), Positives = 9/30 (30%), Gaps = 2/30 (6%)
Query: 238 HPHFLQPQELIDVCNQNKIALQAYASLGST 267
P L+ + I Q Y G T
Sbjct: 267 LPGMKD--FLLTTAEEAGIKYQYYCGKGGT 294
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein,
nucleotide-binding, zinc-binding domain, SOS response,
metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans}
PDB: 2vf8_A*
Length = 842
Score = 27.5 bits (62), Expect = 9.0
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 112 SIGRALKVLLPKFNLKREDIFITSKLSPQYNGNADQV-KSLVA--QTLKDLGTTYLDL 166
+ R ++L P + K P+ ++ LV L LG YL L
Sbjct: 316 PLARVSELLRPYAEEREPGHAERVKNRPEQAIALQRMAADLVKRLDVLLHLGLGYLGL 373
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.132 0.392
Gapped
Lambda K H
0.267 0.0807 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,996,506
Number of extensions: 284152
Number of successful extensions: 1032
Number of sequences better than 10.0: 1
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 109
Length of query: 339
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 245
Effective length of database: 4,077,219
Effective search space: 998918655
Effective search space used: 998918655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.0 bits)