Query psy15667
Match_columns 286
No_of_seqs 137 out of 1268
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 18:30:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15667.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15667hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 5.7E-39 1.9E-43 293.2 34.4 277 2-286 197-569 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 8.2E-39 2.8E-43 292.2 32.6 277 1-285 4-381 (570)
3 3kld_A Contactin 4, axcam, BIG 100.0 1.6E-37 5.6E-42 270.4 25.4 272 2-286 5-382 (384)
4 2rik_A Titin; I-SET IG fold, p 100.0 9.6E-36 3.3E-40 248.2 30.9 239 1-286 4-283 (284)
5 3dmk_A DOWN syndrome cell adhe 100.0 1.4E-34 4.9E-39 274.3 31.8 268 2-285 343-711 (816)
6 1cs6_A Axonin-1; neural cell a 100.0 3.1E-35 1.1E-39 255.3 24.6 270 2-286 4-381 (382)
7 3laf_A Deleted in colorectal c 100.0 1.5E-34 5.1E-39 252.5 27.4 272 2-286 21-400 (403)
8 3qs7_E FL cytokine receptor; i 100.0 2.6E-34 9E-39 253.0 25.3 270 4-286 50-413 (423)
9 2v5m_A Dscam; neurobiology SPL 100.0 1.6E-34 5.5E-39 251.2 23.5 266 1-285 2-387 (388)
10 1bih_A Hemolin; insect immunit 100.0 1.6E-34 5.4E-39 251.6 22.5 271 1-286 5-395 (395)
11 1qz1_A Neural cell adhesion mo 100.0 1.1E-33 3.9E-38 236.3 25.6 243 1-285 1-288 (291)
12 2y25_A Myomesin; structural pr 100.0 2.8E-33 9.4E-38 236.6 28.1 254 1-285 6-313 (317)
13 2yd9_A Receptor-type tyrosine- 100.0 2E-33 6.9E-38 236.6 25.4 236 1-286 5-290 (304)
14 3p3y_A Neurofascin; IG domains 100.0 3.8E-34 1.3E-38 249.8 21.3 278 2-286 16-402 (404)
15 2wim_A N-CAM 2, NCAM2, neural 100.0 6.5E-33 2.2E-37 231.7 27.1 239 1-285 3-282 (291)
16 3dmk_A DOWN syndrome cell adhe 100.0 5E-33 1.7E-37 263.7 27.7 279 2-284 429-806 (816)
17 1e07_A Carcinoembryonic antige 100.0 1.4E-32 4.8E-37 254.1 30.0 263 2-285 203-555 (642)
18 3qs9_E FL cytokine receptor; i 100.0 9.2E-33 3.1E-37 249.4 24.8 266 8-286 54-413 (527)
19 1e07_A Carcinoembryonic antige 100.0 7.8E-32 2.7E-36 249.2 29.3 251 11-286 298-639 (642)
20 3rjd_A High affinity immunoglo 100.0 1.3E-32 4.5E-37 226.3 20.3 214 3-277 2-249 (262)
21 2ec8_A MAST/stem cell growth f 100.0 7.9E-32 2.7E-36 243.4 23.8 268 1-286 35-410 (524)
22 2ocw_A Polymeric-immunoglobuli 100.0 3.1E-30 1.1E-34 235.9 28.8 282 2-286 112-545 (585)
23 2rcj_C Light chain; immunoglob 100.0 2.4E-30 8.1E-35 233.7 27.3 272 7-284 5-417 (523)
24 2ec8_A MAST/stem cell growth f 100.0 1.7E-31 5.9E-36 241.2 19.8 272 2-286 114-509 (524)
25 3oq3_B IFN-alpha/beta binding 100.0 1.1E-30 3.8E-35 222.5 22.7 232 6-286 33-329 (329)
26 2y23_A Myomesin; structural pr 100.0 4.8E-30 1.6E-34 216.2 24.7 245 11-286 10-311 (312)
27 1ry7_B FGFR-3, fibroblast grow 100.0 3E-31 1E-35 226.1 17.1 228 8-286 14-326 (334)
28 4dep_C Interleukin-1 receptor 100.0 1.8E-31 6.3E-36 228.8 14.7 233 9-286 14-332 (349)
29 1itb_B Type 1 interleukin-1 re 100.0 4.3E-31 1.5E-35 223.3 16.7 231 9-286 12-313 (315)
30 2o26_X MAST/stem cell growth f 100.0 2.3E-30 7.9E-35 216.4 20.7 230 2-286 12-287 (290)
31 4fqp_A Poliovirus receptor; im 100.0 2.9E-30 9.8E-35 218.3 20.7 235 5-286 3-303 (313)
32 1z7z_I Intercellular adhesion 100.0 3.6E-30 1.2E-34 228.2 20.4 256 3-286 87-448 (450)
33 3ejj_X Macrophage colony-stimu 100.0 1.8E-29 6.1E-34 210.6 21.4 233 2-286 4-280 (289)
34 1wio_A CD4, T-cell surface gly 100.0 3.5E-30 1.2E-34 222.3 17.3 231 12-285 4-291 (363)
35 3o4o_C Interleukin-1 receptor 100.0 1.3E-30 4.4E-35 222.7 14.3 242 2-285 18-333 (339)
36 2rcj_C Light chain; immunoglob 100.0 1.4E-28 4.7E-33 222.2 27.1 272 2-276 114-513 (523)
37 2wng_A Tyrosine-protein phosph 100.0 1.3E-29 4.6E-34 215.5 17.8 237 3-279 4-311 (327)
38 4fom_A Poliovirus receptor-rel 100.0 2.6E-30 9.1E-35 217.9 13.3 228 9-286 6-299 (308)
39 4dkd_C Macrophage colony-stimu 100.0 1.5E-29 5E-34 211.4 17.2 233 2-286 4-280 (292)
40 1qgc_4 Protein (immunoglobulin 100.0 2.3E-29 7.7E-34 222.2 19.3 276 4-286 3-438 (438)
41 3qs9_E FL cytokine receptor; i 100.0 6.3E-29 2.1E-33 224.4 22.6 239 8-285 233-508 (527)
42 3mjg_X Beta-type platelet-deri 100.0 1.3E-28 4.4E-33 205.6 22.7 230 3-286 1-277 (289)
43 3v2a_R Vascular endothelial gr 100.0 3.4E-32 1.2E-36 256.2 0.3 260 10-286 338-755 (772)
44 3vh8_G Killer cell immunoglobu 100.0 3.6E-29 1.2E-33 211.9 16.6 224 2-276 24-297 (316)
45 2oz4_A Intercellular adhesion 100.0 8E-28 2.7E-32 198.6 20.0 218 2-286 6-263 (265)
46 2nzi_A Titin; IG-domain, FNIII 100.0 3.3E-27 1.1E-31 198.4 23.9 235 1-280 3-283 (305)
47 3u83_A Poliovirus receptor-rel 100.0 1.8E-28 6.3E-33 208.5 14.8 235 2-286 14-319 (331)
48 1z7z_I Intercellular adhesion 100.0 1.1E-27 3.7E-32 212.3 19.8 250 5-285 2-365 (450)
49 2ocw_A Polymeric-immunoglobuli 100.0 1.4E-26 4.7E-31 211.7 26.8 267 8-285 6-439 (585)
50 1wio_A CD4, T-cell surface gly 100.0 1.8E-27 6E-32 205.3 18.9 194 11-285 105-361 (363)
51 3v2a_R Vascular endothelial gr 100.0 8.5E-29 2.9E-33 233.0 9.5 274 3-277 224-651 (772)
52 2j8h_A Titin, connectin; cardi 100.0 5.6E-26 1.9E-30 178.8 23.1 186 1-286 3-196 (197)
53 3rbs_A Myomesin-1; immunoglobu 99.9 1E-26 3.6E-31 185.1 18.6 198 2-286 3-206 (207)
54 2yd1_A Tyrosine-protein phosph 99.9 1E-25 3.4E-30 179.8 23.8 183 1-286 5-199 (212)
55 2a38_A Titin; Z1Z2, structural 99.9 7.3E-26 2.5E-30 177.6 21.5 184 2-286 5-194 (194)
56 2jll_A NCAM2, neural cell adhe 99.9 2.2E-25 7.4E-30 193.6 26.0 232 2-281 1-282 (389)
57 2va4_A NCAM2, N-CAM 2, neural 99.9 3E-25 1E-29 173.8 23.4 183 1-286 1-192 (192)
58 3lcy_A Titin; A-BAND, IG tande 99.9 1.6E-25 5.6E-30 175.8 21.7 184 2-286 7-195 (197)
59 2c5d_C AXL oncogene, tyrosine- 99.9 6.4E-25 2.2E-29 172.7 24.0 184 2-285 2-191 (195)
60 2yd6_A PTPRD protein; hydrolas 99.9 9.1E-25 3.1E-29 174.3 24.3 184 2-285 6-202 (212)
61 2wqr_A IG epsilon chain C regi 99.9 1.7E-25 6E-30 189.9 19.2 238 1-276 6-309 (323)
62 1igt_B IGG2A intact antibody - 99.9 4.6E-25 1.6E-29 195.2 21.0 263 7-275 5-433 (444)
63 2wv3_A Neuroplastin; igcam, me 99.9 3.3E-24 1.1E-28 167.9 23.0 178 1-286 2-189 (190)
64 1rhf_A Tyrosine-protein kinase 99.9 1.7E-24 5.9E-29 168.2 21.1 178 2-286 2-182 (182)
65 1epf_A NCAM, protein (neural c 99.9 2.8E-24 9.4E-29 168.3 21.3 186 1-285 1-189 (191)
66 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.6E-24 5.5E-29 169.1 19.9 184 1-285 1-186 (189)
67 2iep_A Muscle-specific kinase 99.9 6.3E-25 2.1E-29 172.0 17.1 180 2-286 7-189 (192)
68 2vr9_A Roundabout 1, ROBO; imm 99.9 1.7E-24 5.8E-29 173.0 18.6 186 1-284 8-203 (217)
69 1hzh_H IGG, immunoglobulin hea 99.9 1.1E-24 3.8E-29 193.5 19.0 265 8-278 6-445 (457)
70 2v44_A NCAM2, neural cell adhe 99.9 2.3E-23 8E-28 162.8 21.4 178 4-285 4-185 (189)
71 3sgj_C Human FCG3A receptor; r 99.9 3.1E-24 1.1E-28 170.4 15.8 164 2-285 7-172 (204)
72 2r15_A Myomesin-1; sarcomeric 99.9 2.7E-23 9.2E-28 165.2 21.3 190 16-285 16-208 (212)
73 1iga_A IGA1; immunoglobulin; N 99.9 9.3E-23 3.2E-27 182.0 26.3 266 7-276 6-443 (475)
74 1igy_B IGG1 intact antibody MA 99.9 8.6E-25 2.9E-29 193.0 12.6 264 8-276 5-424 (434)
75 2v9r_A Roundabout homolog 1; p 99.9 1.2E-23 4.1E-28 167.2 18.0 187 2-285 9-200 (212)
76 3qs7_E FL cytokine receptor; i 99.9 1E-23 3.4E-28 185.6 18.7 186 96-285 75-321 (423)
77 3p2t_A Leukocyte immunoglobuli 99.9 8.6E-24 2.9E-28 166.5 16.3 78 2-87 5-82 (196)
78 3ojm_B Fibroblast growth facto 99.9 3E-23 1E-27 167.0 19.3 186 2-286 15-220 (231)
79 3k0w_A Mucosa-associated lymph 99.9 5.5E-23 1.9E-27 164.7 20.6 183 2-286 18-201 (218)
80 4fa8_A Secreted protein BARF1; 99.9 1.8E-24 6E-29 171.6 11.5 187 11-280 2-195 (203)
81 1fnl_A Low affinity immunoglob 99.9 9.1E-24 3.1E-28 163.4 15.0 164 2-285 7-172 (175)
82 1f97_A Junction adhesion molec 99.9 7.4E-24 2.5E-28 168.3 14.7 194 2-285 1-205 (212)
83 1za6_B IGG heavy chain; immuno 99.9 8.5E-24 2.9E-28 181.1 16.1 253 8-279 6-333 (344)
84 3grw_A Fibroblast growth facto 99.9 5.6E-23 1.9E-27 166.7 19.9 186 2-286 11-217 (241)
85 3ry4_A Low affinity immunoglob 99.9 2.1E-23 7.2E-28 160.3 15.9 165 2-286 4-170 (170)
86 1f2q_A High affinity immunoglo 99.9 1.4E-23 4.7E-28 162.5 15.0 164 2-285 4-169 (176)
87 2d3v_A Leukocyte immunoglobuli 99.9 2.3E-23 7.9E-28 164.1 14.3 173 1-275 4-180 (196)
88 3laf_A Deleted in colorectal c 99.9 1.1E-22 3.7E-27 177.2 18.7 183 2-193 121-351 (403)
89 2ifg_A High affinity nerve gro 99.9 4.7E-23 1.6E-27 176.7 14.5 180 2-286 158-344 (347)
90 4f80_A Butyrophilin subfamily 99.9 3.6E-22 1.2E-26 160.7 18.7 128 116-285 82-211 (226)
91 1ugn_A LIR1, leukocyte immunog 99.9 1.9E-22 6.4E-27 159.1 16.1 183 1-285 4-196 (198)
92 1nbq_A JAM, junctional adhesio 99.9 4E-23 1.4E-27 163.6 11.9 195 2-285 4-207 (209)
93 3s97_C Contactin-1; carbonic a 99.9 1.8E-22 6.1E-27 158.9 15.3 187 4-286 10-200 (201)
94 2gi7_A GPVI protein; IG-like d 99.9 2.6E-22 8.8E-27 156.6 15.8 169 1-285 7-183 (184)
95 2x1w_L Vascular endothelial gr 99.9 1.8E-22 6.3E-27 161.1 15.1 176 9-285 14-205 (213)
96 1uct_A Immunoglobulin alpha FC 99.9 2.9E-22 1E-26 160.6 15.6 180 2-285 9-196 (218)
97 3b5h_A Cervical EMMPRIN, HAB18 99.9 5.5E-21 1.9E-25 148.7 21.5 164 12-286 8-182 (184)
98 3jz7_A MCAR, CAR, coxsackievir 99.9 5.4E-22 1.8E-26 157.6 15.6 204 6-286 4-211 (214)
99 4frw_A Poliovirus receptor-rel 99.9 1.3E-22 4.4E-27 161.3 10.6 200 8-285 5-209 (218)
100 1oll_A NK receptor; immune sys 99.9 1.4E-21 4.7E-26 153.0 16.3 176 2-285 4-186 (188)
101 3bp6_B Programmed cell death 1 99.9 2.1E-21 7.1E-26 153.4 17.4 74 208-285 118-191 (202)
102 3p3y_A Neurofascin; IG domains 99.9 3E-21 1E-25 168.1 19.7 179 8-195 122-353 (404)
103 3kld_A Contactin 4, axcam, BIG 99.9 1.2E-21 4.1E-26 170.1 16.9 176 11-194 111-335 (384)
104 1vca_A VCAM-D1,2, human vascul 99.9 3.1E-21 1.1E-25 152.8 17.7 36 4-39 2-38 (202)
105 3r4d_A CEA-related cell adhesi 99.9 1E-20 3.5E-25 149.8 19.2 190 5-279 2-191 (208)
106 3mj8_L Stimulatory hamster ant 99.9 2.5E-21 8.6E-26 154.1 14.6 197 3-283 2-209 (213)
107 1bih_A Hemolin; insect immunit 99.9 4.9E-21 1.7E-25 166.3 16.4 179 8-194 106-349 (395)
108 1jbj_A CD3 epsilon and gamma e 99.9 2.6E-21 8.8E-26 151.2 12.3 61 205-277 119-179 (186)
109 2fbo_J V1V2;, variable region- 99.9 1.9E-20 6.6E-25 152.4 17.5 208 6-285 6-250 (250)
110 2ny1_B T-cell surface glycopro 99.9 4.5E-21 1.5E-25 149.3 13.0 174 12-286 5-178 (184)
111 2v5m_A Dscam; neurobiology SPL 99.9 4.3E-21 1.5E-25 166.4 14.3 208 2-218 103-373 (388)
112 1hng_A CD2; T lymphocyte adhes 99.9 4.1E-21 1.4E-25 148.7 12.6 112 118-285 62-174 (176)
113 3d9a_L Light chain of hyhel10 99.9 1.3E-20 4.5E-25 149.9 15.5 195 4-284 3-210 (213)
114 1lk3_L 9D7 light chain; antige 99.8 3.1E-20 1.1E-24 147.5 16.3 194 5-282 4-207 (210)
115 1nkr_A P58-CL42 KIR; inhibitor 99.8 5E-20 1.7E-24 145.6 17.4 77 2-84 8-84 (201)
116 4fmk_A Poliovirus receptor-rel 99.8 3.1E-20 1.1E-24 148.1 16.2 204 8-285 7-215 (225)
117 1zvo_C Myeloma immunoglobulin 99.8 1.8E-18 6.2E-23 155.7 29.0 272 8-283 6-499 (512)
118 1sy6_A T-cell surface glycopro 99.8 8.2E-21 2.8E-25 150.6 12.0 74 207-286 127-203 (204)
119 1cs6_A Axonin-1; neural cell a 99.8 4E-20 1.4E-24 160.0 17.2 178 9-194 108-334 (382)
120 2p1y_A Bispecific alpha/beta T 99.8 1.8E-19 6.2E-24 145.9 19.3 35 4-39 2-36 (238)
121 2c1o_A IGK-C protein; FAB frag 99.8 6.8E-20 2.3E-24 149.9 15.9 198 2-283 38-251 (254)
122 1qgc_4 Protein (immunoglobulin 99.8 3.3E-20 1.1E-24 163.4 14.9 193 2-194 116-385 (438)
123 1p6f_A NKP46, natural cytotoxi 99.8 1.4E-19 4.9E-24 147.2 17.4 75 2-85 7-82 (242)
124 2rik_A Titin; I-SET IG fold, p 99.8 8.9E-19 3E-23 145.3 22.5 162 71-285 18-189 (284)
125 3sbw_C Programmed cell death 1 99.8 6.3E-19 2.2E-23 140.9 19.8 130 116-286 79-210 (222)
126 1q0x_L FAB 9B1, light chain; a 99.8 2.4E-19 8.2E-24 142.6 16.6 74 207-280 129-208 (212)
127 3mj6_A Junctional adhesion mol 99.8 5.6E-20 1.9E-24 151.4 13.2 222 3-285 6-235 (268)
128 3tv3_L PGT128 light chain, IG 99.8 3.8E-20 1.3E-24 147.1 11.8 127 117-282 68-206 (211)
129 1dr9_A B7-1 (CD80), T lymphocy 99.8 4.4E-20 1.5E-24 145.6 11.8 129 116-283 64-197 (201)
130 3r06_A Anti-mouse CD3epsilon a 99.8 2.8E-19 9.7E-24 142.2 16.5 197 3-282 2-208 (213)
131 3s96_B 3B5H10 FAB light chain; 99.8 1.1E-19 3.8E-24 145.0 14.0 75 207-281 135-214 (218)
132 2nzi_A Titin; IG-domain, FNIII 99.8 1.4E-18 4.9E-23 145.5 21.5 162 71-285 17-195 (305)
133 4i0k_A CD276 antigen; immunogl 99.8 8.6E-20 2.9E-24 146.1 13.2 130 116-286 71-205 (222)
134 2zg1_A Sialic acid-binding IG- 99.8 4.4E-19 1.5E-23 141.1 17.2 193 7-284 5-210 (214)
135 2if7_A SLAM family member 6; N 99.8 3.2E-19 1.1E-23 140.1 15.5 180 8-281 4-186 (193)
136 3pv7_A B7-H6, IG-like domain-c 99.8 2.3E-19 7.8E-24 146.2 15.1 198 2-283 2-220 (248)
137 3nl4_L Antigen binding fragmen 99.8 1.9E-19 6.4E-24 143.2 14.2 189 3-271 2-198 (213)
138 3esu_F Antibody 14B7* light ch 99.8 5.2E-19 1.8E-23 144.3 16.8 38 3-40 5-42 (250)
139 2jll_A NCAM2, neural cell adhe 99.8 1.1E-18 3.9E-23 151.1 19.9 160 73-285 15-192 (389)
140 1c1e_H Catalytic antibody 1E9 99.8 1.2E-18 4E-23 139.3 17.9 81 205-286 136-219 (219)
141 1f3r_B FV antibody fragment; I 99.8 9.4E-19 3.2E-23 143.6 17.7 32 8-39 6-39 (257)
142 2pet_A Lutheran blood group gl 99.8 6.2E-19 2.1E-23 141.7 16.1 204 8-285 6-229 (231)
143 3auv_A SC-DSFV derived from th 99.8 1.7E-18 6E-23 143.5 19.1 38 3-40 13-50 (276)
144 2ghw_B Anti-SARS SCFV antibody 99.8 5.8E-18 2E-22 137.8 21.9 32 8-39 8-41 (247)
145 3sob_L Antibody light chain; b 99.8 5.4E-19 1.8E-23 142.7 15.3 198 3-283 25-232 (237)
146 2znx_A SCFV; fluorotryptohpan, 99.8 1.2E-18 4E-23 141.7 16.8 38 3-40 2-39 (242)
147 3juy_B 3B3 single chain varian 99.8 7.7E-18 2.6E-22 137.9 21.8 38 2-39 6-45 (256)
148 1b6u_A KIR2DL3, P58 killer cel 99.8 4.8E-19 1.6E-23 145.3 14.3 67 204-274 117-183 (257)
149 1moe_A Anti-CEA MAB T84.66; an 99.8 1.4E-18 4.9E-23 140.7 16.9 196 3-272 2-219 (240)
150 1nfd_E H57 FAB; complex (immun 99.8 6.8E-20 2.3E-24 145.8 8.6 73 207-279 127-204 (212)
151 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 2.7E-18 9.3E-23 140.7 18.2 37 3-39 4-40 (256)
152 3mtr_A N-CAM-1, NCAM-1, neural 99.8 6.4E-19 2.2E-23 140.5 13.5 82 2-89 19-102 (215)
153 2xzc_L FAB A.17 light chain; i 99.8 1.1E-18 3.9E-23 139.1 14.8 78 207-284 128-212 (216)
154 3bkj_L WO2 IGG2A FAB fragment 99.8 1.1E-18 3.7E-23 142.7 14.6 198 3-283 35-247 (252)
155 1svz_A Immunoglobulin;, single 99.8 1E-17 3.4E-22 136.4 19.6 37 3-39 2-43 (247)
156 2y23_A Myomesin; structural pr 99.8 2.4E-18 8.3E-23 144.5 16.3 147 2-152 106-310 (312)
157 1qz1_A Neural cell adhesion mo 99.8 1.5E-17 5.3E-22 138.2 20.8 155 71-277 15-181 (291)
158 2wim_A N-CAM 2, NCAM2, neural 99.8 1.8E-18 6.1E-23 143.9 14.2 144 2-154 98-284 (291)
159 2yd9_A Receptor-type tyrosine- 99.8 2.4E-18 8.1E-23 144.4 14.7 143 3-156 109-293 (304)
160 3eow_R Poliovirus receptor; im 99.8 1.2E-18 4.3E-23 139.4 12.2 131 115-285 76-210 (221)
161 1nqb_A Single-chain antibody f 99.8 3.7E-17 1.3E-21 134.0 21.0 130 117-285 79-231 (256)
162 3uzq_A Anti-dengue MAB 4E11; d 99.8 3.7E-17 1.3E-21 133.6 20.8 35 5-39 4-40 (253)
163 3ux9_B SCFV antibody; five hel 99.8 1.9E-17 6.6E-22 135.4 19.1 73 8-85 8-96 (256)
164 1gsm_A Madcam-1, mucosal addre 99.8 2E-17 6.9E-22 130.5 18.3 71 4-85 7-81 (210)
165 1ry7_B FGFR-3, fibroblast grow 99.8 1.1E-18 3.7E-23 148.2 11.9 140 12-156 133-329 (334)
166 2y25_A Myomesin; structural pr 99.8 1.6E-18 5.5E-23 145.9 12.6 173 71-285 19-198 (317)
167 3gkz_A Anti-methamphetamine si 99.8 1.6E-16 5.6E-21 130.0 24.3 36 4-39 10-47 (257)
168 3knb_B Obscurin-like protein 1 99.8 1.5E-18 5E-23 123.0 10.3 86 1-91 12-97 (107)
169 3bqu_C 3H6 FAB light chain; be 99.8 7.2E-19 2.5E-23 141.9 9.7 191 3-277 24-225 (233)
170 2j6e_L IGM, FAB light chain; a 99.8 2.1E-18 7.1E-23 139.2 12.2 75 207-281 149-229 (234)
171 2vol_A Murine IGG FC; FC, zinc 99.8 1.9E-18 6.7E-23 137.1 11.7 70 207-276 123-197 (207)
172 2rgs_A I, IG gamma-2B heavy ch 99.8 8.7E-19 3E-23 140.3 9.7 44 2-45 9-58 (218)
173 3umt_A SCFV heavy chain and li 99.8 1.2E-16 4E-21 130.9 22.4 32 8-39 8-41 (256)
174 4dzb_B Vbeta2 (MAIT T cell rec 99.8 3.1E-17 1.1E-21 133.4 18.7 37 3-39 2-38 (246)
175 4fqp_A Poliovirus receptor; im 99.8 7.6E-18 2.6E-22 141.9 15.2 152 2-156 117-306 (313)
176 1qok_A MFE-23 recombinant anti 99.8 1E-16 3.6E-21 133.2 21.6 35 6-40 30-66 (282)
177 2gjj_A A21 single-chain antibo 99.8 3.4E-17 1.2E-21 134.8 18.3 38 2-39 5-48 (264)
178 4fom_A Poliovirus receptor-rel 99.8 2.5E-18 8.6E-23 144.4 11.5 145 8-157 120-303 (308)
179 3d9a_H Heavy chain of hyhel10 99.8 2.4E-17 8.4E-22 130.8 16.1 76 205-281 130-208 (210)
180 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 3E-17 1E-21 131.4 16.6 207 8-285 6-221 (222)
181 1hnf_A CD2; T lymphocyte adhes 99.8 1.4E-17 4.7E-22 129.4 13.3 111 117-283 66-177 (182)
182 3knb_A Titin; IG-like, titin, 99.8 4.3E-18 1.5E-22 119.0 9.4 85 2-91 5-91 (100)
183 3omz_A Human vdelta1 gamma del 99.8 5E-17 1.7E-21 133.3 17.2 209 1-273 1-231 (259)
184 3rjd_A High affinity immunoglo 99.7 2.2E-17 7.6E-22 135.1 13.8 151 72-285 15-165 (262)
185 3fku_X Neutralizing antibody F 99.7 1E-16 3.5E-21 133.1 17.9 36 3-39 2-39 (280)
186 1pz5_B Heavy chain of FAB (SYA 99.7 9.1E-17 3.1E-21 128.4 16.9 78 205-283 137-217 (220)
187 1ccz_A Protein (CD58); LFA-3, 99.7 9.5E-18 3.3E-22 129.1 10.6 165 11-284 4-168 (171)
188 1igt_B IGG2A intact antibody - 99.7 1.3E-17 4.4E-22 147.4 12.5 187 2-194 123-388 (444)
189 1itb_B Type 1 interleukin-1 re 99.7 1.5E-17 5.3E-22 140.0 12.4 132 12-152 113-312 (315)
190 3oq3_B IFN-alpha/beta binding 99.7 4.6E-17 1.6E-21 138.2 15.4 146 97-285 66-222 (329)
191 2o26_X MAST/stem cell growth f 99.7 1.7E-17 5.9E-22 138.1 11.6 143 2-154 91-288 (290)
192 3nl4_H Antigen binding fragmen 99.7 3.1E-16 1E-20 124.9 18.2 132 116-285 74-212 (215)
193 3vh8_G Killer cell immunoglobu 99.7 9.7E-17 3.3E-21 135.3 15.8 152 72-276 37-199 (316)
194 2fbj_H IGA-kappa J539 FAB (hea 99.7 5.6E-16 1.9E-20 124.0 19.4 127 117-278 79-212 (220)
195 1op3_H FAB 2G12, heavy chain; 99.7 1.8E-16 6.1E-21 127.3 16.4 75 205-280 140-218 (225)
196 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.7E-16 5.7E-21 130.9 16.5 37 3-39 16-57 (268)
197 4dep_C Interleukin-1 receptor 99.7 6.1E-17 2.1E-21 138.3 14.2 148 98-285 47-215 (349)
198 3o4o_C Interleukin-1 receptor 99.7 5.5E-17 1.9E-21 138.0 13.8 146 97-285 53-218 (339)
199 3ejj_X Macrophage colony-stimu 99.7 8.9E-17 3E-21 133.5 14.7 140 5-153 92-280 (289)
200 1mju_H Immunoglobulin MS6-12; 99.7 1.5E-16 5E-21 128.1 15.2 131 116-285 78-215 (227)
201 2dru_A Chimera of CD48 antigen 99.7 1.5E-16 5E-21 123.5 14.7 110 116-283 68-177 (180)
202 4ei6_B Vbeta16 XV19 type II na 99.7 7.8E-16 2.7E-20 125.0 19.4 36 2-38 2-37 (245)
203 1l6x_A Immunoglobulin gamma-1 99.7 2.1E-17 7.3E-22 131.0 9.5 44 2-45 1-50 (207)
204 1i1c_A IGG2A, IG gamma-2A chai 99.7 2.4E-17 8.2E-22 133.8 10.0 43 2-44 15-63 (239)
205 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.9E-15 6.5E-20 121.1 20.7 77 205-281 138-221 (223)
206 2w59_A IGY FCU3-4; immunoglobu 99.7 1E-16 3.6E-21 129.3 13.3 42 2-43 12-57 (231)
207 2gki_A Nuclease; anti-DNA anti 99.7 1.1E-15 3.6E-20 127.7 19.6 75 8-85 28-123 (291)
208 1igy_B IGG1 intact antibody MA 99.7 6.4E-18 2.2E-22 148.9 6.3 189 2-195 119-379 (434)
209 3nfj_J T cell receptor beta ch 99.7 1E-15 3.5E-20 124.3 18.8 35 5-39 4-38 (245)
210 1waa_A Titin; metal binding pr 99.7 6.7E-17 2.3E-21 111.3 9.6 86 1-92 4-89 (93)
211 3bae_H WO2 IGG2A FAB fragment 99.7 3.1E-16 1.1E-20 126.1 14.7 77 206-283 143-222 (228)
212 3q5y_A TCR N15 beta; IG, T cel 99.7 1.6E-16 5.6E-21 128.6 12.9 200 3-275 3-212 (240)
213 2wng_A Tyrosine-protein phosph 99.7 2.3E-16 8E-21 133.6 14.3 135 9-145 124-311 (327)
214 3m8o_H Immunoglobulin A1 heavy 99.7 3.8E-15 1.3E-19 119.1 20.3 128 116-278 80-214 (221)
215 3u83_A Poliovirus receptor-rel 99.7 2.4E-16 8.2E-21 133.5 13.7 142 8-155 138-321 (331)
216 3pl6_D MBP peptide / T-cell re 99.7 5.3E-16 1.8E-20 127.8 15.2 36 3-39 27-62 (268)
217 2wbj_D OB TCR; transmembrane, 99.7 2.6E-15 8.9E-20 124.5 19.1 38 3-40 25-62 (279)
218 1dn0_B IGM-kappa cold agglutin 99.7 5.2E-15 1.8E-19 119.4 20.1 79 207-285 139-225 (232)
219 2lvc_A Obscurin-like protein 1 99.7 8E-17 2.7E-21 110.3 7.5 85 2-92 4-90 (91)
220 1g1c_A Immunoglobulin-like dom 99.7 3.2E-16 1.1E-20 109.0 10.7 86 2-91 5-90 (99)
221 3o3u_N Maltose-binding peripla 99.7 3.4E-16 1.2E-20 142.8 13.4 179 11-277 375-567 (581)
222 3qp3_A Titin; I-SET IG-like, s 99.7 4E-16 1.4E-20 109.4 10.6 85 2-91 8-92 (103)
223 2cqv_A MLCK, myosin light chai 99.7 4.4E-16 1.5E-20 111.4 10.8 85 1-90 6-90 (114)
224 1hxm_B Gamma-delta T-cell rece 99.7 5.8E-15 2E-19 119.8 18.7 212 3-284 2-226 (242)
225 2xqy_G A13-D6.3 monoclonal ant 99.7 1.6E-15 5.3E-20 124.7 15.0 76 205-281 141-219 (261)
226 3qib_D 2B4 beta chain; IG doma 99.7 1.4E-15 4.9E-20 125.4 14.6 70 207-276 163-244 (270)
227 1hzh_H IGG, immunoglobulin hea 99.7 8.5E-16 2.9E-20 136.2 13.9 188 2-195 132-398 (457)
228 4dkd_C Macrophage colony-stimu 99.7 6.1E-16 2.1E-20 128.6 12.1 140 5-154 92-281 (292)
229 2lu7_A Obscurin-like protein 1 99.7 3E-16 1E-20 105.7 8.2 78 9-92 3-80 (84)
230 3liz_H 4C3 monoclonal antibody 99.7 4.4E-15 1.5E-19 121.4 16.6 129 116-284 78-217 (253)
231 1wit_A Twitchin 18TH IGSF modu 99.7 4.2E-16 1.4E-20 107.2 8.9 83 2-91 2-86 (93)
232 3knb_B Obscurin-like protein 1 99.7 5.4E-16 1.9E-20 109.6 9.4 80 205-286 25-104 (107)
233 3knb_A Titin; IG-like, titin, 99.7 5E-16 1.7E-20 108.4 9.1 80 205-286 17-98 (100)
234 1iga_A IGA1; immunoglobulin; N 99.7 3.1E-15 1.1E-19 133.3 16.5 176 15-194 139-392 (475)
235 1u2h_A APEG-1, aortic preferen 99.6 1.2E-15 4.1E-20 106.0 10.7 85 2-91 5-90 (99)
236 3puc_A Titin; I-SET IG-like do 99.6 1.4E-15 4.9E-20 105.6 10.5 84 2-90 6-89 (99)
237 3shs_A HOC head outer capsid p 99.6 6E-14 2.1E-18 112.3 21.0 159 3-179 3-209 (304)
238 1c5d_H Monoclonal antibody aga 99.6 1.2E-14 4.1E-19 115.7 17.3 196 8-283 6-212 (215)
239 2kdg_A Myotilin; immonoglobuli 99.6 9.4E-16 3.2E-20 106.8 9.1 85 2-90 5-89 (100)
240 1mq8_A ICAM-1, intercellular a 99.6 1.7E-15 5.7E-20 125.9 11.8 224 5-285 2-280 (291)
241 2yuz_A Myosin-binding protein 99.6 6.4E-16 2.2E-20 107.9 7.7 78 1-85 6-83 (100)
242 3irg_B Obscurin-like protein 1 99.6 2.6E-15 8.9E-20 105.9 10.3 84 2-90 13-96 (107)
243 3qhz_H Human monoclonal antibo 99.6 5.2E-14 1.8E-18 113.4 19.1 78 207-285 146-227 (232)
244 2yr3_A Myosin light chain kina 99.6 1.7E-15 5.9E-20 105.3 8.5 82 2-91 11-92 (99)
245 2ckn_A Basic fibroblast growth 99.6 2E-15 6.9E-20 104.2 8.4 80 1-90 8-87 (95)
246 2aty_A Complement receptor chi 99.6 8.9E-15 3E-19 126.5 14.1 68 208-275 289-361 (376)
247 3bn9_D E2 FAB heavy chain; ant 99.6 1.5E-14 5E-19 118.6 14.6 33 8-40 6-40 (257)
248 2kkq_A Myotilin; unknown funct 99.6 3.8E-15 1.3E-19 106.9 9.7 86 2-91 15-101 (116)
249 2dm2_A Palladin; beta-sandwich 99.6 2.6E-15 8.9E-20 106.6 8.7 86 1-90 7-93 (110)
250 3tv3_H PGT128 heavy chain, IG 99.6 4.1E-14 1.4E-18 114.6 16.4 80 205-285 152-235 (239)
251 3irg_A Titin; IG-like, titin, 99.6 4.1E-15 1.4E-19 103.4 9.1 84 2-90 5-90 (100)
252 2wqr_A IG epsilon chain C regi 99.6 9.5E-16 3.3E-20 129.7 6.5 136 4-142 115-309 (323)
253 3to4_D NKT vbeta2 (mouse varia 99.6 2.8E-14 9.5E-19 116.5 15.0 197 5-274 4-217 (253)
254 1fhg_A Telokin; immunoglobulin 99.6 1.1E-14 3.8E-19 109.9 11.2 86 2-91 41-126 (154)
255 3bfo_A Mucosa-associated lymph 99.6 1.2E-14 4.3E-19 99.4 10.3 76 1-90 2-77 (91)
256 2eny_A Obscurin; beta-sandwich 99.6 1.4E-15 4.6E-20 107.0 5.5 87 1-92 7-94 (104)
257 1ypz_F T-cell receptor gamma c 99.6 8.4E-14 2.9E-18 112.1 16.7 35 5-39 4-40 (230)
258 1g1c_A Immunoglobulin-like dom 99.6 8.3E-15 2.8E-19 101.8 9.4 81 205-286 17-97 (99)
259 2edf_A Obscurin; beta-sandwich 99.6 5.6E-15 1.9E-19 103.5 8.5 87 1-93 7-93 (103)
260 2edj_A Roundabout homolog 2; K 99.6 7.2E-15 2.5E-19 102.3 9.0 81 1-89 7-88 (100)
261 1he7_A High affinity nerve gro 99.6 2.4E-14 8.3E-19 103.2 11.7 87 2-92 4-92 (126)
262 1nct_A Titin; cell adhesion, g 99.6 2.1E-15 7.1E-20 106.4 6.0 83 2-89 14-96 (106)
263 2dm3_A KIAA0992 protein, palla 99.6 2.9E-15 1E-19 106.2 6.8 86 1-90 8-93 (110)
264 1wwb_X Protein (brain derived 99.6 3.1E-14 1E-18 99.8 12.0 87 2-91 4-90 (103)
265 2bk8_A Connectin, M1, titin he 99.6 2.6E-14 9E-19 98.9 11.5 84 3-91 2-86 (97)
266 2e7c_A Myosin-binding protein 99.6 1.1E-14 3.8E-19 104.7 9.9 82 2-89 21-105 (118)
267 3mjg_X Beta-type platelet-deri 99.6 1.6E-14 5.4E-19 119.9 12.1 129 12-156 105-280 (289)
268 2e6p_A Obscurin-like protein 1 99.6 4.2E-15 1.4E-19 104.3 7.1 85 2-92 7-94 (104)
269 1ow0_A IG alpha-1 chain C regi 99.6 5.9E-16 2E-20 123.3 3.0 72 205-276 119-200 (214)
270 1x44_A Myosin-binding protein 99.6 8E-15 2.7E-19 102.8 8.4 84 2-91 7-92 (103)
271 1he7_A High affinity nerve gro 99.6 2.2E-14 7.4E-19 103.5 10.5 79 206-285 13-97 (126)
272 2v9t_A Roundabout homolog 1; s 99.6 5.8E-15 2E-19 105.9 7.6 90 2-91 9-100 (117)
273 4acp_A IG gamma-1 chain C regi 99.6 1.2E-14 4.1E-19 117.8 10.3 44 2-45 23-71 (240)
274 1oga_E TRBC1, T-cell receptor 99.6 2.3E-13 8E-18 111.0 18.0 200 4-276 5-218 (252)
275 1bec_A 14.3.D T cell antigen r 99.6 1.1E-13 3.8E-18 111.9 15.8 71 205-275 133-211 (238)
276 1pd6_A Cardiac MYBP-C;, myosin 99.6 7E-15 2.4E-19 103.3 7.5 82 2-89 15-98 (104)
277 2dlt_A Myosin binding protein 99.6 6.2E-15 2.1E-19 103.9 7.2 79 1-85 7-85 (106)
278 2edk_A Myosin-binding protein 99.6 2.3E-15 7.8E-20 105.2 4.6 83 1-89 7-93 (101)
279 1wit_A Twitchin 18TH IGSF modu 99.6 1.9E-14 6.4E-19 98.9 9.1 78 205-286 14-93 (93)
280 3caf_A Fibroblast growth facto 99.6 6.9E-15 2.4E-19 102.4 6.9 85 2-90 4-92 (100)
281 2bk8_A Connectin, M1, titin he 99.6 5.8E-14 2E-18 97.1 11.5 81 205-286 13-93 (97)
282 3u2s_H PG9 heavy chain; greek 99.5 1.7E-13 5.8E-18 111.6 15.7 77 207-284 155-235 (248)
283 2k1m_A Myosin-binding protein 99.5 1.6E-14 5.6E-19 99.6 8.1 83 2-90 8-90 (95)
284 3n9g_H FAB fragment of MAB CR4 99.5 4.5E-13 1.6E-17 107.7 17.9 34 251-285 190-223 (230)
285 1u2h_A APEG-1, aortic preferen 99.5 2.3E-14 7.7E-19 99.5 8.8 80 206-286 18-97 (99)
286 2kdg_A Myotilin; immonoglobuli 99.5 3E-14 1E-18 99.1 9.5 80 206-286 18-97 (100)
287 3qp3_A Titin; I-SET IG-like, s 99.5 3.2E-14 1.1E-18 99.5 9.6 79 206-286 21-99 (103)
288 2oz4_A Intercellular adhesion 99.5 1.2E-13 4.2E-18 113.3 14.6 133 100-285 37-180 (265)
289 1za6_B IGG heavy chain; immuno 99.5 3E-14 1E-18 121.6 11.2 166 70-280 12-210 (344)
290 2lu7_A Obscurin-like protein 1 99.5 2.9E-14 9.9E-19 95.9 8.7 75 205-286 8-82 (84)
291 2yuv_A Myosin-binding protein 99.5 3.2E-14 1.1E-18 99.1 9.1 85 1-91 6-91 (100)
292 2e6q_A Obscurin-like protein 1 99.5 4.6E-14 1.6E-18 100.0 9.7 83 2-91 8-101 (112)
293 2eo9_A Roundabout homolog 1; b 99.5 1.7E-14 6E-19 103.6 7.6 83 1-91 7-90 (118)
294 2cqv_A MLCK, myosin light chai 99.5 6.2E-14 2.1E-18 100.1 10.4 79 205-285 19-97 (114)
295 1wwb_X Protein (brain derived 99.5 4.8E-14 1.6E-18 98.8 9.5 80 206-286 14-97 (103)
296 3kvq_A Vascular endothelial gr 99.5 1.3E-14 4.5E-19 102.4 6.3 82 2-90 10-91 (108)
297 3cx2_A Myosin-binding protein 99.5 9.4E-14 3.2E-18 98.2 10.7 90 2-91 4-100 (108)
298 2cr6_A KIAA1556 protein, obscu 99.5 1.1E-14 3.6E-19 104.3 5.7 87 2-92 13-99 (115)
299 3rbs_A Myomesin-1; immunoglobu 99.5 7.1E-14 2.4E-18 110.7 11.1 83 2-92 117-200 (207)
300 1gxe_A Myosin binding protein 99.5 3.1E-14 1.1E-18 105.2 8.2 110 163-285 27-137 (139)
301 3qr2_A Basigin; CD147, EMMPRIN 99.5 2.4E-14 8.3E-19 105.7 7.4 87 2-90 21-117 (137)
302 3puc_A Titin; I-SET IG-like do 99.5 8E-14 2.7E-18 96.7 9.5 79 206-286 19-97 (99)
303 2dm7_A KIAA1556 protein; beta- 99.5 2.2E-14 7.4E-19 101.4 6.4 85 1-92 7-91 (108)
304 2lvc_A Obscurin-like protein 1 99.5 5.4E-14 1.8E-18 96.1 8.2 74 205-285 18-91 (91)
305 1gxe_A Myosin binding protein 99.5 2.8E-14 9.4E-19 105.5 7.1 78 9-91 25-131 (139)
306 2v5y_A Receptor-type tyrosine- 99.5 6.2E-13 2.1E-17 124.6 17.8 221 15-280 89-347 (731)
307 2yuz_A Myosin-binding protein 99.5 5.1E-14 1.8E-18 98.1 8.0 76 204-285 18-93 (100)
308 4fa8_A Secreted protein BARF1; 99.5 3.7E-14 1.3E-18 112.0 8.0 84 2-90 106-193 (203)
309 2e7b_A Obscurin; IG-like domai 99.5 2.6E-14 8.8E-19 100.1 6.3 80 1-86 7-86 (103)
310 2edh_A Obscurin; structural ge 99.5 1.3E-13 4.5E-18 98.1 10.1 84 2-92 19-102 (113)
311 1ypz_E T cell receptor delta, 99.5 5.8E-13 2E-17 105.4 14.7 35 5-40 4-38 (207)
312 3caf_A Fibroblast growth facto 99.5 4.3E-14 1.5E-18 98.3 6.8 80 205-285 20-99 (100)
313 2e7c_A Myosin-binding protein 99.5 1.8E-13 6.2E-18 98.3 10.1 77 206-285 37-113 (118)
314 2ckn_A Basic fibroblast growth 99.5 1.5E-13 5.2E-18 94.7 9.3 76 204-286 20-95 (95)
315 2kkq_A Myotilin; unknown funct 99.5 2E-13 6.8E-18 97.8 10.2 81 205-286 27-108 (116)
316 2dav_A SLOW MYBP-C, myosin-bin 99.5 9.3E-14 3.2E-18 100.2 8.4 89 3-91 8-103 (126)
317 2cry_A KIN of IRRE-like protei 99.5 2.5E-14 8.6E-19 103.4 5.5 88 2-91 14-105 (122)
318 2ens_A Advanced glycosylation 99.5 2.2E-14 7.7E-19 99.1 5.0 72 2-87 10-81 (96)
319 2dm2_A Palladin; beta-sandwich 99.5 8.6E-14 2.9E-18 98.6 8.0 81 205-286 20-101 (110)
320 1nct_A Titin; cell adhesion, g 99.5 4.3E-14 1.5E-18 99.6 6.2 80 205-286 26-105 (106)
321 1waa_A Titin; metal binding pr 99.5 1.1E-13 3.7E-18 95.1 8.1 75 205-286 17-91 (93)
322 3sob_H Antibody heavy chain, l 99.5 4.4E-12 1.5E-16 103.6 19.0 34 251-285 216-249 (256)
323 2dku_A KIAA1556 protein; beta- 99.5 9.3E-14 3.2E-18 97.2 7.6 83 2-90 8-90 (103)
324 2cpc_A KIAA0657 protein; immun 99.5 2.2E-13 7.7E-18 96.9 9.7 85 2-92 10-97 (113)
325 2yr3_A Myosin light chain kina 99.5 7.5E-14 2.6E-18 96.9 7.1 77 205-286 23-99 (99)
326 2edn_A Myosin-binding protein 99.5 1.9E-13 6.6E-18 97.5 9.1 91 2-92 12-109 (118)
327 1fhg_A Telokin; immunoglobulin 99.5 2.4E-13 8.1E-18 102.5 9.7 80 206-286 54-133 (154)
328 3so5_A LIG-3, leucine-rich rep 99.5 4.5E-13 1.6E-17 94.7 10.6 89 1-89 9-102 (112)
329 3kvq_A Vascular endothelial gr 99.5 2.4E-13 8.1E-18 95.9 8.7 77 206-286 23-99 (108)
330 3irg_B Obscurin-like protein 1 99.5 2.9E-13 9.8E-18 95.3 9.1 79 206-286 26-104 (107)
331 2dm3_A KIAA0992 protein, palla 99.5 5.2E-14 1.8E-18 99.7 5.2 81 205-286 21-101 (110)
332 3irg_A Titin; IG-like, titin, 99.5 3.1E-13 1.1E-17 93.7 9.1 80 205-286 17-98 (100)
333 3mlr_H Human monoclonal anti-H 99.5 3.1E-12 1.1E-16 102.5 16.2 76 206-284 142-223 (226)
334 1gl4_B Basement membrane-speci 99.5 3.2E-13 1.1E-17 93.5 9.0 76 205-286 22-97 (98)
335 2cr3_A Basic fibroblast growth 99.4 5.3E-13 1.8E-17 92.7 9.4 77 203-286 13-89 (99)
336 2cr3_A Basic fibroblast growth 99.4 3.3E-13 1.1E-17 93.7 8.3 73 8-90 9-81 (99)
337 2edj_A Roundabout homolog 2; K 99.4 2.5E-13 8.5E-18 94.4 7.4 77 205-286 20-97 (100)
338 3iu4_H CHP3 FAB heavy chain; a 99.4 3.8E-12 1.3E-16 104.5 15.5 32 251-283 189-220 (263)
339 1zvo_C Myeloma immunoglobulin 99.4 1.1E-11 3.6E-16 111.5 19.7 91 100-194 330-443 (512)
340 2edn_A Myosin-binding protein 99.4 3.9E-13 1.3E-17 95.9 8.2 81 206-286 25-115 (118)
341 4hwu_A Fibroblast growth facto 99.4 6.4E-13 2.2E-17 91.4 9.1 74 205-286 13-86 (95)
342 2eo1_A OBSCN protein, cDNA FLJ 99.4 1.7E-13 5.8E-18 95.7 5.9 75 11-91 20-94 (102)
343 1gl4_B Basement membrane-speci 99.4 7.6E-13 2.6E-17 91.6 9.1 79 2-90 9-89 (98)
344 1wwc_A Protein (NT-3 growth fa 99.4 2.2E-12 7.4E-17 92.5 11.5 87 2-92 8-94 (118)
345 2dav_A SLOW MYBP-C, myosin-bin 99.4 1.4E-12 4.9E-17 94.0 10.1 81 206-286 20-110 (126)
346 1iam_A ICAM-1, CD54, intercell 99.4 9.7E-12 3.3E-16 95.9 15.1 67 205-275 98-166 (185)
347 2r15_A Myomesin-1; sarcomeric 99.4 2.2E-12 7.5E-17 101.8 11.8 85 3-91 118-202 (212)
348 2eo9_A Roundabout homolog 1; b 99.4 6.3E-13 2.2E-17 95.3 7.0 76 205-285 20-96 (118)
349 2yuv_A Myosin-binding protein 99.4 3.7E-12 1.3E-16 88.5 10.7 76 204-286 19-94 (100)
350 1wwc_A Protein (NT-3 growth fa 99.4 2.3E-12 7.8E-17 92.4 9.9 76 209-285 21-99 (118)
351 2a38_A Titin; Z1Z2, structural 99.4 1.5E-12 5.3E-17 101.2 9.6 85 2-91 103-187 (194)
352 3bfo_A Mucosa-associated lymph 99.4 1.9E-12 6.5E-17 88.3 8.9 70 205-285 15-85 (91)
353 3cx2_A Myosin-binding protein 99.4 1.7E-12 5.9E-17 91.6 9.0 37 250-286 71-107 (108)
354 2cr6_A KIAA1556 protein, obscu 99.4 9.5E-13 3.3E-17 94.0 7.6 75 206-285 26-100 (115)
355 4hwu_A Fibroblast growth facto 99.4 1.2E-12 4.3E-17 90.0 8.0 72 8-90 7-78 (95)
356 4f80_A Butyrophilin subfamily 99.4 5.5E-12 1.9E-16 100.8 12.9 148 4-154 4-213 (226)
357 2k1m_A Myosin-binding protein 99.4 1.9E-12 6.4E-17 89.1 8.6 75 205-286 20-94 (95)
358 3m45_A Cell adhesion molecule 99.4 1.7E-12 5.8E-17 91.3 8.0 83 2-89 6-96 (108)
359 2eny_A Obscurin; beta-sandwich 99.4 9.1E-13 3.1E-17 92.4 6.5 76 205-285 20-95 (104)
360 2cry_A KIN of IRRE-like protei 99.4 1.2E-13 4.3E-18 99.7 1.8 82 204-286 24-112 (122)
361 2v5y_A Receptor-type tyrosine- 99.4 4.9E-12 1.7E-16 118.5 13.1 158 86-285 91-258 (731)
362 3s35_X Vascular endothelial gr 99.4 8.8E-12 3E-16 89.8 11.6 36 250-285 73-108 (122)
363 1x44_A Myosin-binding protein 99.4 3E-12 1E-16 89.5 8.8 75 204-285 18-94 (103)
364 3so5_A LIG-3, leucine-rich rep 99.4 4.3E-12 1.5E-16 89.6 9.4 82 205-286 22-112 (112)
365 2yd6_A PTPRD protein; hydrolas 99.3 5.9E-12 2E-16 99.6 11.0 83 3-90 109-194 (212)
366 2x1w_L Vascular endothelial gr 99.3 4.1E-12 1.4E-16 100.8 9.8 60 98-158 136-211 (213)
367 2wv3_A Neuroplastin; igcam, me 99.3 1.1E-11 3.9E-16 96.2 12.1 85 2-91 92-182 (190)
368 3s35_X Vascular endothelial gr 99.3 2.7E-12 9.2E-17 92.5 6.9 84 5-90 10-101 (122)
369 1hxm_A Gamma-delta T-cell rece 99.3 7E-11 2.4E-15 94.9 15.7 35 5-39 4-40 (229)
370 2edf_A Obscurin; beta-sandwich 99.3 4.4E-12 1.5E-16 88.6 7.4 76 204-286 19-94 (103)
371 2dlt_A Myosin binding protein 99.3 2.4E-12 8.1E-17 90.5 6.0 76 205-285 20-95 (106)
372 3s97_C Contactin-1; carbonic a 99.3 6.2E-12 2.1E-16 98.2 8.7 81 2-91 113-193 (201)
373 1hng_A CD2; T lymphocyte adhes 99.3 3.7E-12 1.3E-16 98.1 7.1 121 12-143 6-166 (176)
374 1pd6_A Cardiac MYBP-C;, myosin 99.3 8E-12 2.7E-16 87.5 8.1 74 205-285 28-102 (104)
375 3m45_A Cell adhesion molecule 99.3 5.3E-11 1.8E-15 83.5 12.2 93 160-285 12-104 (108)
376 2yd1_A Tyrosine-protein phosph 99.3 1.1E-11 3.9E-16 97.9 9.8 79 3-90 111-190 (212)
377 2c1o_A IGK-C protein; FAB frag 99.3 1.4E-11 4.7E-16 100.3 10.4 121 124-276 11-138 (254)
378 3shs_A HOC head outer capsid p 99.3 4.4E-10 1.5E-14 90.2 18.4 156 70-282 14-176 (304)
379 2xot_A Amphoterin-induced prot 99.3 7.3E-12 2.5E-16 107.6 8.6 35 8-43 252-286 (361)
380 2j8h_A Titin, connectin; cardi 99.3 1.1E-11 3.7E-16 96.7 8.9 77 10-91 112-189 (197)
381 2v5t_A NCAM2, N-CAM 2, neural 99.3 1.9E-11 6.3E-16 94.5 10.1 74 11-91 107-180 (189)
382 2cpc_A KIAA0657 protein; immun 99.3 1.2E-11 4.2E-16 87.7 8.3 74 205-285 25-98 (113)
383 2ens_A Advanced glycosylation 99.3 2.8E-12 9.6E-17 88.4 4.4 71 204-285 21-93 (96)
384 3k0w_A Mucosa-associated lymph 99.3 2.1E-11 7.3E-16 96.9 9.9 74 2-89 118-191 (218)
385 2iep_A Muscle-specific kinase 99.3 1.8E-11 6.2E-16 94.9 9.1 81 2-90 100-180 (192)
386 3rbg_A Cytotoxic and regulator 99.3 1.3E-11 4.5E-16 89.3 7.7 80 5-89 4-91 (124)
387 3uto_A Twitchin; kinase, muscl 99.3 3E-11 1E-15 109.8 11.8 86 2-92 482-567 (573)
388 1nbq_A JAM, junctional adhesio 99.3 1.4E-11 4.8E-16 96.7 8.3 80 64-143 69-197 (209)
389 2edh_A Obscurin; structural ge 99.3 4.8E-11 1.7E-15 84.7 10.4 74 205-286 31-104 (113)
390 3r08_E T-cell surface glycopro 99.3 1.6E-12 5.4E-17 86.1 2.3 60 9-84 6-66 (82)
391 2fbo_J V1V2;, variable region- 99.3 3.5E-11 1.2E-15 97.3 10.7 81 64-144 91-240 (250)
392 1epf_A NCAM, protein (neural c 99.2 2E-11 6.9E-16 94.6 8.8 78 2-87 100-179 (191)
393 2e6p_A Obscurin-like protein 1 99.2 1.8E-11 6E-16 85.6 7.5 69 205-276 22-90 (104)
394 2e6q_A Obscurin-like protein 1 99.2 3.7E-11 1.3E-15 85.0 9.0 77 203-286 18-104 (112)
395 2c5d_C AXL oncogene, tyrosine- 99.2 4.4E-11 1.5E-15 93.1 10.3 77 2-90 106-183 (195)
396 2vr9_A Roundabout 1, ROBO; imm 99.2 9E-12 3.1E-16 98.7 6.4 81 2-90 108-197 (217)
397 2v44_A NCAM2, neural cell adhe 99.2 1.5E-11 5.1E-16 95.3 7.5 78 2-87 96-175 (189)
398 2eo1_A OBSCN protein, cDNA FLJ 99.2 1.9E-11 6.7E-16 85.0 7.3 74 205-285 23-96 (102)
399 3rbg_A Cytotoxic and regulator 99.2 3.5E-11 1.2E-15 87.0 8.9 35 250-285 65-99 (124)
400 3u1s_H FAB PGT145 heavy chain; 99.2 2.4E-10 8.4E-15 93.9 14.9 76 207-285 182-263 (267)
401 3b5h_A Cervical EMMPRIN, HAB18 99.2 7.1E-11 2.4E-15 91.0 11.0 85 2-91 83-175 (184)
402 2edk_A Myosin-binding protein 99.2 3E-12 1E-16 89.1 2.9 66 205-273 20-89 (101)
403 3bn3_B ICAM-5, intercellular a 99.2 1.9E-10 6.4E-15 89.4 12.9 118 119-275 54-174 (196)
404 1rhf_A Tyrosine-protein kinase 99.2 8.2E-11 2.8E-15 90.5 10.7 75 2-90 98-173 (182)
405 3mtr_A N-CAM-1, NCAM-1, neural 99.2 6.9E-11 2.3E-15 93.7 10.6 79 205-285 30-110 (215)
406 2dku_A KIAA1556 protein; beta- 99.2 5.1E-11 1.8E-15 83.0 8.3 75 204-285 19-93 (103)
407 1jhl_L IGG1-kappa D11.15 FV (l 99.2 1.2E-10 4.1E-15 82.0 9.7 77 4-85 3-93 (108)
408 2e7b_A Obscurin; IG-like domai 99.2 4.4E-11 1.5E-15 83.4 6.9 74 205-285 20-93 (103)
409 3f8u_B Tapasin; endoplasmic re 99.2 2.2E-09 7.5E-14 92.1 18.6 65 116-181 253-320 (401)
410 3r4d_A CEA-related cell adhesi 99.2 1.2E-10 4.2E-15 91.4 10.2 79 3-91 113-191 (208)
411 1xau_A B- and T-lymphocyte att 99.2 2.4E-10 8.3E-15 78.0 10.0 77 12-90 24-106 (122)
412 2v9r_A Roundabout homolog 1; p 99.2 6.3E-11 2.1E-15 93.3 8.1 79 2-89 111-191 (212)
413 1xau_A B- and T-lymphocyte att 99.2 7E-11 2.4E-15 80.6 7.0 37 250-286 78-115 (122)
414 3uto_A Twitchin; kinase, muscl 99.2 1.4E-10 4.9E-15 105.3 11.4 81 204-286 493-573 (573)
415 2d3v_A Leukocyte immunoglobuli 99.2 6E-11 2.1E-15 92.7 7.7 83 2-89 100-182 (196)
416 2vsd_A CHIR AB1; immune system 99.2 7.5E-11 2.6E-15 82.7 7.4 75 2-86 5-79 (105)
417 3mj8_L Stimulatory hamster ant 99.2 7.8E-11 2.7E-15 93.0 8.3 89 2-92 114-206 (213)
418 1hnf_A CD2; T lymphocyte adhes 99.2 8.9E-11 3.1E-15 90.8 8.4 121 12-143 9-171 (182)
419 1z9m_A GAPA225; nectin-like, I 99.2 1.1E-10 3.8E-15 86.7 8.3 81 2-88 38-127 (145)
420 3mj6_A Junctional adhesion mol 99.1 1.3E-10 4.4E-15 95.1 9.3 89 64-153 85-236 (268)
421 3qr2_A Basigin; CD147, EMMPRIN 99.1 7.3E-11 2.5E-15 86.8 6.8 28 250-277 89-116 (137)
422 2dm7_A KIAA1556 protein; beta- 99.1 1.5E-10 5.1E-15 81.4 8.1 74 204-285 19-92 (108)
423 2v9t_A Roundabout homolog 1; s 99.1 5.4E-11 1.8E-15 85.0 5.8 78 205-285 21-107 (117)
424 2va4_A NCAM2, N-CAM 2, neural 99.1 2.2E-10 7.4E-15 88.7 9.7 82 3-90 96-184 (192)
425 2ywz_A NEW antigen receptor va 99.1 3.1E-10 1.1E-14 80.3 9.5 78 4-84 2-87 (111)
426 4frw_A Poliovirus receptor-rel 99.1 1.2E-10 3.9E-15 91.7 8.1 80 5-88 121-200 (218)
427 3lcy_A Titin; A-BAND, IG tande 99.1 3.3E-10 1.1E-14 87.9 9.8 79 205-285 19-97 (197)
428 1f97_A Junction adhesion molec 99.1 1.1E-10 3.7E-15 91.8 7.0 86 2-89 104-195 (212)
429 3grw_A Fibroblast growth facto 99.1 5.3E-10 1.8E-14 89.8 11.2 83 8-90 120-209 (241)
430 2ifg_A High affinity nerve gro 99.1 2.8E-10 9.6E-15 97.0 9.8 79 13-91 257-337 (347)
431 2id5_A Lingo-1, leucine rich r 99.1 8E-11 2.7E-15 104.8 6.5 77 7-91 390-469 (477)
432 4hwn_A FC receptor-like A; FCR 99.1 1.9E-10 6.6E-15 81.0 6.9 71 2-86 8-83 (108)
433 3p2t_A Leukocyte immunoglobuli 99.1 1.7E-10 5.9E-15 90.0 7.4 80 2-87 100-179 (196)
434 1ugn_A LIR1, leukocyte immunog 99.1 3.2E-10 1.1E-14 88.6 8.9 79 3-87 102-181 (198)
435 2q20_A VK1 O18/O8 germline lig 99.1 4.7E-10 1.6E-14 79.1 8.9 78 3-85 4-95 (109)
436 1fnl_A Low affinity immunoglob 99.1 2.2E-10 7.6E-15 87.7 7.8 70 6-88 92-162 (175)
437 1z9m_A GAPA225; nectin-like, I 99.1 3.9E-10 1.3E-14 83.7 8.9 91 162-285 46-136 (145)
438 2gi7_A GPVI protein; IG-like d 99.1 1.9E-10 6.6E-15 88.9 7.3 74 2-86 94-167 (184)
439 3zyj_A Leucine-rich repeat-con 99.1 1.9E-10 6.5E-15 101.4 8.1 82 2-92 341-426 (440)
440 1f2q_A High affinity immunoglo 99.1 3.6E-10 1.2E-14 86.5 8.7 71 5-88 88-159 (176)
441 3ojm_B Fibroblast growth facto 99.1 1.4E-10 4.7E-15 92.5 6.3 80 205-285 31-110 (231)
442 1qfw_M FV, antibody (anti beta 99.1 8.6E-10 2.9E-14 77.5 9.6 77 4-85 3-93 (108)
443 3d9a_L Light chain of hyhel10 99.1 2.2E-10 7.5E-15 90.4 7.3 86 2-87 112-201 (213)
444 2ghw_B Anti-SARS SCFV antibody 99.1 4.3E-10 1.5E-14 90.9 9.1 79 2-85 135-227 (247)
445 1jbj_A CD3 epsilon and gamma e 99.1 8E-11 2.7E-15 91.3 4.5 62 13-89 118-179 (186)
446 1uct_A Immunoglobulin alpha FC 99.1 2.2E-10 7.7E-15 91.2 7.1 74 2-85 106-179 (218)
447 2coq_A NEW antigen receptor va 99.1 5.3E-10 1.8E-14 78.6 8.3 78 4-84 2-87 (108)
448 1lk3_L 9D7 light chain; antige 99.1 2.2E-10 7.5E-15 90.3 6.9 86 2-87 111-200 (210)
449 1q0x_L FAB 9B1, light chain; a 99.1 1E-09 3.4E-14 86.6 10.5 88 2-90 115-206 (212)
450 3khq_A B-cell antigen receptor 99.1 4.6E-10 1.6E-14 82.1 7.9 77 4-87 19-101 (133)
451 2ny1_B T-cell surface glycopro 99.1 2.8E-10 9.5E-15 87.8 7.0 68 9-91 104-171 (184)
452 3jz7_A MCAR, CAR, coxsackievir 99.1 2.2E-10 7.6E-15 90.0 6.6 81 2-91 121-204 (214)
453 3r08_E T-cell surface glycopro 99.0 1.7E-11 5.9E-16 81.1 -0.2 55 205-272 11-66 (82)
454 1i8k_A Epidermal growth factor 99.0 1E-09 3.5E-14 77.0 8.9 77 4-85 3-93 (107)
455 3s96_B 3B5H10 FAB light chain; 99.0 4.1E-10 1.4E-14 89.1 7.6 88 2-91 121-212 (218)
456 2id5_A Lingo-1, leucine rich r 99.0 2.1E-10 7.1E-15 102.1 6.4 78 204-286 396-476 (477)
457 2e27_L Anti-ciguatoxin antibod 99.0 9.6E-10 3.3E-14 78.8 8.7 78 3-85 4-95 (119)
458 3nl4_L Antigen binding fragmen 99.0 6.5E-10 2.2E-14 87.7 8.2 82 2-83 114-198 (213)
459 4fmk_A Poliovirus receptor-rel 99.0 4.8E-10 1.6E-14 88.6 7.5 90 64-153 84-218 (225)
460 3moq_A NEW antigen receptor va 99.0 1.8E-09 6.3E-14 78.0 9.8 80 3-85 1-88 (126)
461 1mqk_L Antibody 7E2 FV fragmen 99.0 7.2E-10 2.5E-14 79.6 7.6 77 4-85 3-93 (120)
462 3ry4_A Low affinity immunoglob 99.0 5.6E-10 1.9E-14 84.8 7.3 70 7-89 90-160 (170)
463 2xzc_L FAB A.17 light chain; i 99.0 8.4E-10 2.9E-14 87.3 8.5 85 2-86 114-202 (216)
464 3zyj_A Leucine-rich repeat-con 99.0 3.6E-10 1.2E-14 99.6 7.0 80 203-286 351-432 (440)
465 1nfd_E H57 FAB; complex (immun 99.0 7.4E-11 2.5E-15 93.2 2.2 85 2-87 113-200 (212)
466 1ccz_A Protein (CD58); LFA-3, 99.0 4.2E-10 1.4E-14 86.1 6.0 77 64-143 61-161 (171)
467 3tv3_L PGT128 light chain, IG 99.0 8.7E-10 3E-14 86.8 8.0 90 2-92 111-204 (211)
468 2xot_A Amphoterin-induced prot 99.0 4.8E-10 1.6E-14 96.2 7.0 76 203-285 256-335 (361)
469 3sgj_C Human FCG3A receptor; r 99.0 6.2E-10 2.1E-14 87.6 7.1 66 9-87 95-161 (204)
470 3zyi_A Leucine-rich repeat-con 99.0 3.6E-10 1.2E-14 99.9 6.3 81 2-92 352-436 (452)
471 1oll_A NK receptor; immune sys 99.0 3.9E-10 1.3E-14 87.5 5.7 74 2-86 99-172 (188)
472 1ntl_A CRRY-IG; immunology, co 99.0 6E-09 2.1E-13 94.4 14.3 40 5-44 345-389 (551)
473 2dru_A Chimera of CD48 antigen 99.0 1.6E-09 5.4E-14 83.6 9.0 124 10-143 7-171 (180)
474 1f3r_B FV antibody fragment; I 99.0 5.8E-10 2E-14 90.9 6.8 78 4-86 141-232 (257)
475 1sq2_N Novel antigen receptor; 99.0 2.1E-09 7E-14 76.3 8.8 79 4-85 2-88 (113)
476 3zyi_A Leucine-rich repeat-con 99.0 4E-10 1.4E-14 99.6 6.1 79 203-286 362-442 (452)
477 1sy6_A T-cell surface glycopro 99.0 1.9E-10 6.6E-15 90.6 3.5 63 15-87 126-191 (204)
478 1h5b_A Murine T cell receptor 99.0 1.3E-09 4.4E-14 77.3 7.5 80 5-87 4-95 (113)
479 2pet_A Lutheran blood group gl 99.0 4.3E-09 1.5E-13 83.8 11.4 82 3-84 119-210 (231)
480 1nkr_A P58-CL42 KIR; inhibitor 99.0 1.5E-09 5E-14 85.1 8.5 77 2-86 108-184 (201)
481 3bp6_B Programmed cell death 1 99.0 1.9E-09 6.5E-14 84.3 9.1 79 206-285 15-101 (202)
482 1zxq_A ICAM-2, intercellular a 99.0 1.1E-08 3.7E-13 78.8 12.8 70 205-274 100-172 (192)
483 1i3g_L Antibody FV fragment; a 99.0 2.7E-09 9.3E-14 75.3 8.7 77 4-85 6-96 (111)
484 1nqb_A Single-chain antibody f 99.0 1.5E-09 5E-14 88.6 8.3 79 2-85 121-218 (256)
485 4i0k_A CD276 antigen; immunogl 99.0 1.8E-09 6.2E-14 85.6 8.6 83 3-89 112-196 (222)
486 3udw_C Poliovirus receptor; PV 99.0 2.3E-09 8E-14 76.1 8.1 36 250-285 78-114 (118)
487 3umt_A SCFV heavy chain and li 99.0 1.4E-09 4.8E-14 88.5 7.6 79 2-85 138-230 (256)
488 1dr9_A B7-1 (CD80), T lymphocy 99.0 4.5E-09 1.5E-13 82.0 10.3 73 15-90 119-192 (201)
489 3r06_A Anti-mouse CD3epsilon a 99.0 8.4E-10 2.9E-14 87.0 6.1 85 2-86 112-200 (213)
490 1jhl_L IGG1-kappa D11.15 FV (l 98.9 1E-08 3.5E-13 71.9 11.1 96 163-286 10-107 (108)
491 1qok_A MFE-23 recombinant anti 98.9 1.7E-09 5.8E-14 89.5 8.1 77 3-85 163-253 (282)
492 4gos_A V-SET domain-containing 98.9 1.3E-08 4.5E-13 73.5 11.9 36 250-285 83-118 (125)
493 2p1y_A Bispecific alpha/beta T 98.9 1.1E-09 3.9E-14 87.9 6.8 79 4-85 129-221 (238)
494 2d9q_B Granulocyte colony-stim 98.9 5.5E-08 1.9E-12 81.5 17.2 74 8-86 6-84 (313)
495 3sob_L Antibody light chain; b 98.9 9.7E-10 3.3E-14 88.0 6.2 85 2-86 135-223 (237)
496 3qib_D 2B4 beta chain; IG doma 98.9 2.8E-09 9.7E-14 87.4 9.1 117 124-273 3-123 (270)
497 1j05_L T84.66 antibody, anti-C 98.9 2.1E-09 7E-14 76.0 6.9 77 4-85 3-97 (111)
498 1i1r_A GP130, interleukin-6 re 98.9 1.2E-07 4E-12 79.1 18.6 70 7-84 9-85 (303)
499 3juy_B 3B3 single chain varian 98.9 2.4E-09 8.3E-14 87.1 8.1 79 2-85 149-242 (256)
500 3bqu_C 3H6 FAB light chain; be 98.9 1.2E-09 4.3E-14 87.3 5.8 86 2-87 134-223 (233)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=5.7e-39 Score=293.21 Aligned_cols=277 Identities=24% Similarity=0.430 Sum_probs=217.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|+.++|.|.+.|.|+|.++|+|||..|..+.++.+.. ..+ ...|.|.+++.+|+|.|+|.
T Consensus 197 pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~----~~~-~~~L~i~~v~~~D~G~Y~C~ 271 (570)
T 3b43_A 197 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTL----VEN-TATLTVLKVTKGDAGQYTCY 271 (570)
T ss_dssp CCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEE----ETT-EEEEEESSBCGGGCEEEEEE
T ss_pred CCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEE----ECC-EEEEEEcccCcccCEEEEEE
Confidence 7888888888899999999999999999999999999999998776664421 111 23599999999999999999
Q ss_pred EEcCCEEEEEe--------------------------------cCCCCCeeEEEeeCCccCcCCC--------CcceEEE
Q psy15667 82 AENRAGTCEIT--------------------------------PYDSGPYLIAWFKDGRQIPGRT--------SSTSLVI 121 (286)
Q Consensus 82 a~n~~g~~~~~--------------------------------~~~~~~~~~~W~~~g~~l~~~~--------~~~~l~i 121 (286)
|.|..|..... ..+.+++.+.|+|||..+.... ....|.|
T Consensus 272 a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i 351 (570)
T 3b43_A 272 ASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEM 351 (570)
T ss_dssp EEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEE
T ss_pred EECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEE
Confidence 99998864321 0112456899999999875422 2356999
Q ss_pred ccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccc---
Q psy15667 122 NPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIES--- 197 (286)
Q Consensus 122 ~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~--- 197 (286)
.++..+|+|.|+|.|.|..|.. ...+.|.|..+|.+...+ ...+.+|+.+.|.|.+.|.|.|.+.|.+....+..
T Consensus 352 ~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~ 430 (570)
T 3b43_A 352 YNLSVEDSGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKK 430 (570)
T ss_dssp ESCCGGGCEEEEEEEEBTTBCC-EEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSS
T ss_pred CCCCcccCEEEEEEEEeCCCEE-EEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCC
Confidence 9999999999999999999976 457888888877665443 46678899999999999999999999984321100
Q ss_pred --------------------------c-------------------------ccccCCCCCCCeEEEEEeeecCCCCCeE
Q psy15667 198 --------------------------F-------------------------AFPFDGLPEGARTRVICGVTHGDPPLTI 226 (286)
Q Consensus 198 --------------------------~-------------------------~~~~~~~~~g~~~~l~c~~~~~~p~~~~ 226 (286)
+ ......+.+|+.+.|.|.+. |.|++.+
T Consensus 431 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~-g~p~~~v 509 (570)
T 3b43_A 431 YKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIE-GAEPISV 509 (570)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEE-SCSSCCC
T ss_pred EEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEe-cCCCCEE
Confidence 0 00123356799999999985 7889999
Q ss_pred EEEeCCeeC-CCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 227 RWLKDGKPL-SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 227 ~W~~~g~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|+|++..+ ....++.+.. ......|.|.++..+|+|.|+|.|.|.+|..+.++.|.|.
T Consensus 510 ~W~k~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 510 AWFKDKGEIVRESDNIWISY-SENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEEETTEECCCCTTTEEECC-CSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred EEEeCCeEeccCCCeEEEEE-CCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 999998655 3444444432 2335789999999999999999999999999999999873
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=8.2e-39 Score=292.15 Aligned_cols=277 Identities=27% Similarity=0.492 Sum_probs=215.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|+.++|.|.+.|+|.|.|.|+|||..|..+.++.+.. .+ ....|.|.+++.+|+|.|+|
T Consensus 4 ~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~----~~-~~~~L~I~~v~~~D~G~Y~C 78 (570)
T 3b43_A 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQF----KN-NVASLVINKVDHSDVGEYTC 78 (570)
T ss_dssp CCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEEC----CT-TEEEEEESSCCGGGCEEEEE
T ss_pred CCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEE----EC-CEEEEEEccCChhhCEEEEE
Confidence 48999988888999999999999999999999999999999998776665421 11 22469999999999999999
Q ss_pred EEEcCCEEEEEe-----------c-----------------------CCCCCeeEEEeeCCccCcCCC--------Ccce
Q psy15667 81 VAENRAGTCEIT-----------P-----------------------YDSGPYLIAWFKDGRQIPGRT--------SSTS 118 (286)
Q Consensus 81 ~a~n~~g~~~~~-----------~-----------------------~~~~~~~~~W~~~g~~l~~~~--------~~~~ 118 (286)
.|.|..|..... + .+.+++.+.|+|||..+.... ....
T Consensus 79 ~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 158 (570)
T 3b43_A 79 KAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVAT 158 (570)
T ss_dssp EEEETTEEEEEEEEEEECCCCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEEE
T ss_pred EEEeCCceEEEEEEEEECCCCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEEE
Confidence 999998854210 0 112456899999999886422 2367
Q ss_pred EEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 119 LVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 119 l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
|.|.++..+|+|.|+|.|.|..|.. ...+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.|.|.|.+.|.+....
T Consensus 159 L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~ 237 (570)
T 3b43_A 159 LQILQTDQSHVGQYNCSASNPLGTA-SSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNRE 237 (570)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEE
T ss_pred EEECcCChHHCEEEEEEEEeCCcEE-EEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEE
Confidence 9999999999999999999998875 3456666642 34443333 35567899999999999999999999984221
Q ss_pred ccc-----------------------------c--------------------------ccccCCCCCCCeEEEEEeeec
Q psy15667 195 IES-----------------------------F--------------------------AFPFDGLPEGARTRVICGVTH 219 (286)
Q Consensus 195 ~~~-----------------------------~--------------------------~~~~~~~~~g~~~~l~c~~~~ 219 (286)
+.. + ..+...+.+|+.+.|.|.+.
T Consensus 238 i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~- 316 (570)
T 3b43_A 238 IRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIG- 316 (570)
T ss_dssp CCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEE-
T ss_pred CcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEe-
Confidence 100 0 00012356799999999985
Q ss_pred CCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 220 GDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 220 ~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|.|.+.+.|+|+|..+....++.+.... ....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 317 g~P~p~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 381 (570)
T 3b43_A 317 GSPEIKVLWYKDETEIQESSKFRMSFVE-SVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV 381 (570)
T ss_dssp SSSSCEEEEEETTEECCCSSSEEEEEET-TEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECE
T ss_pred eCCCCEEEEeECCEECCCCCcEEEEEEC-CEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEe
Confidence 7899999999999999776665544332 3568999999999999999999999999999998876
No 3
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=1.6e-37 Score=270.35 Aligned_cols=272 Identities=25% Similarity=0.427 Sum_probs=198.4
Q ss_pred CCeeEeccccccc---cCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEccc-ccCCCeE
Q psy15667 2 PPILTYSFIEQTL---QPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHV-TVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~---~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~-~~~D~G~ 77 (286)
+|.|...+.+..+ .+|+.+.|.|.+.|+|.|+|+|+|||.+|.....+... ..++ .|.|.++ ..+|+|.
T Consensus 5 ~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~---~~~g----~l~i~~~~~~~D~G~ 77 (384)
T 3kld_A 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYS---VVDG----SLLINNPNKTQDAGT 77 (384)
T ss_dssp EEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEE---EETT----EEEEESCCHHHHCEE
T ss_pred CCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEE---EECC----EEEEcCCCCcccCEE
Confidence 6899999988876 68999999999999999999999999999754332211 1122 2556665 8899999
Q ss_pred EEEEEEcCCEEEEE-----e-----cC------------------------CCCCeeEEEeeCCccCcCC------CCcc
Q psy15667 78 YACVAENRAGTCEI-----T-----PY------------------------DSGPYLIAWFKDGRQIPGR------TSST 117 (286)
Q Consensus 78 Y~C~a~n~~g~~~~-----~-----~~------------------------~~~~~~~~W~~~g~~l~~~------~~~~ 117 (286)
|+|.|.|..|.... . .+ ..+.+.+.|++|+.++... ...+
T Consensus 78 Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 157 (384)
T 3kld_A 78 YQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG 157 (384)
T ss_dssp EEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTC
T ss_pred EEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCC
Confidence 99999999886421 0 00 0123579999999876421 2346
Q ss_pred eEEEccCCCCCCeeEEEEEEcCCcceeee--eeEEEEc-------CCCce--ecCCceEEecCCCEEEEeeEeeecCCeE
Q psy15667 118 SLVINPVGREDRGIYQCIARRSDGDVAQG--SAELQLG-------GLPYV--RLIPKVTAIDGEGLSIKCPVAGYPIEEV 186 (286)
Q Consensus 118 ~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~--~~~l~v~-------~~~~~--~~~~~~~~~~g~~~~l~c~~~~~p~~~v 186 (286)
.|.|.++.++|+|.|+|.|.|..+..... ...+.+. ..|.+ .......+.+|+.+.|.|.+.|.|.|.+
T Consensus 158 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i 237 (384)
T 3kld_A 158 NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI 237 (384)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEE
T ss_pred cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcE
Confidence 79999999999999999999987653211 1122221 11212 1223456778999999999999999999
Q ss_pred EEEEcCC-cccc-------------------------cc-------------------------cccCCCCCCCeEEEEE
Q psy15667 187 HWEKVPP-KIES-------------------------FA-------------------------FPFDGLPEGARTRVIC 215 (286)
Q Consensus 187 ~w~~~~~-~~~~-------------------------~~-------------------------~~~~~~~~g~~~~l~c 215 (286)
.|.+... .+.. |. .....+.+|+.+.|.|
T Consensus 238 ~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C 317 (384)
T 3kld_A 238 LWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 317 (384)
T ss_dssp EEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEEC
T ss_pred EEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEe
Confidence 9998321 1100 00 0022357899999999
Q ss_pred eeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 216 GVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 216 ~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+. |.|.|.+.|+|+|..+....++.+. .+.|.|.++..+|+|.|+|.|.|.+|...+++.|.|.
T Consensus 318 ~~~-g~P~p~i~W~k~g~~l~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 318 KAN-GRPKPTYRWLKNGDPLLTRDRIQIE-----QGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEE-EESCCEEEEEETTEECCCBTTEEEE-----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECC-ccCCCeEEEEECCEECCCCccEEEe-----CCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 985 7889999999999998766555442 3479999999999999999999999999999999984
No 4
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=9.6e-36 Score=248.19 Aligned_cols=239 Identities=26% Similarity=0.469 Sum_probs=184.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+..+.++.+.. .++ ...|.|.+++.+|+|.|+|
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~----~~~-~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTL----VEN-TATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEE----ETT-EEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEE----cCC-EEEEEEecCCcccCEEEEE
Confidence 48999999999999999999999999999999999999999998776665421 111 2369999999999999999
Q ss_pred EEEcCCEEEEEe--------------------------------cCCCCCeeEEEeeCCccCcCCC--------CcceEE
Q psy15667 81 VAENRAGTCEIT--------------------------------PYDSGPYLIAWFKDGRQIPGRT--------SSTSLV 120 (286)
Q Consensus 81 ~a~n~~g~~~~~--------------------------------~~~~~~~~~~W~~~g~~l~~~~--------~~~~l~ 120 (286)
.|.|..|..... ..+.+.+.+.|++++..+.... ....|.
T Consensus 79 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~ 158 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLE 158 (284)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEE
T ss_pred EEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEE
Confidence 999987753210 0112346799999998875432 235799
Q ss_pred EccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccc
Q psy15667 121 INPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFA 199 (286)
Q Consensus 121 i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~ 199 (286)
|.++..+|+|.|+|.+.|..|.. ...+.|.|..+|.+...+ ...
T Consensus 159 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~---------------------------------- 203 (284)
T 2rik_A 159 MYNLSVEDSGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHPVE---------------------------------- 203 (284)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCBCCSCCCCEE----------------------------------
T ss_pred ECCCCcccCEEEEEEEEcCCCce-eEEEEEEEecCCcceeCCCcce----------------------------------
Confidence 99999999999999999998865 446777776665443322 122
Q ss_pred cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 200 FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 200 ~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....
T Consensus 204 -----~~~g~~v~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 276 (284)
T 2rik_A 204 -----TLKGADVHLECELQ-GTPPFQVSWHKDKRELRSGKKYKIMSE-NFLTSIHILNVDSADIGEYQCKASNDVGSYTC 276 (284)
T ss_dssp -----ECTTCCEEEEEECB-SSSCCEEEEEETTEEECBTTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred -----ecCCCeEEEEEEEE-ecCCCEEEEEECCEECcCCCCEEEEEc-CCEEEEEEcCCCcccCEEEEEEEEeCCCceeE
Confidence 33455566666553 567788999999998876665555433 23468999999999999999999999999999
Q ss_pred EEEEEEC
Q psy15667 280 SSKLQVK 286 (286)
Q Consensus 280 ~~~L~V~ 286 (286)
++.|.|+
T Consensus 277 ~~~l~V~ 283 (284)
T 2rik_A 277 VGSITLK 283 (284)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 9999986
No 5
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.4e-34 Score=274.27 Aligned_cols=268 Identities=32% Similarity=0.591 Sum_probs=212.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.+...+.++.+.+|++++|.|.+.|+|.+.+.|++||..+..... .|.|.+++.+|+|.|+|.
T Consensus 343 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~---------------~L~i~~v~~~d~G~Y~C~ 407 (816)
T 3dmk_A 343 PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES---------------VLRIESVKKEDKGMYQCF 407 (816)
T ss_dssp EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSS---------------EEEESSCCGGGCEEEEEE
T ss_pred CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCC---------------EEEEcCCCHHHCEEEEEE
Confidence 45667777888999999999999999999999999999998854321 388999999999999999
Q ss_pred EEcCCEEEEEe----------------------------------cCCCCCeeEEEeeCCccCcCCCC------------
Q psy15667 82 AENRAGTCEIT----------------------------------PYDSGPYLIAWFKDGRQIPGRTS------------ 115 (286)
Q Consensus 82 a~n~~g~~~~~----------------------------------~~~~~~~~~~W~~~g~~l~~~~~------------ 115 (286)
|.|..|..... ..+.+++.+.|++||..+.....
T Consensus 408 a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 487 (816)
T 3dmk_A 408 VRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGD 487 (816)
T ss_dssp EECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSC
T ss_pred EECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCC
Confidence 99987754321 01123467999999988754211
Q ss_pred -cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 116 -STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 -~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.++..+|+|.|+|.|.|..|.. ...+.|.|...|.+...+...+..|+.+.|.|.+.+.|.+.+.|.+....
T Consensus 488 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~ 566 (816)
T 3dmk_A 488 VVSYLNITSVHANDGGLYKCIAKSKVGVA-EHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRA 566 (816)
T ss_dssp EEEEEEESSCCTTTCEEEEEEEEETTEEE-EEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEE
T ss_pred cEEEEEEeeccccCCEEEEEEEEECCCeE-EEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeE
Confidence 1359999999999999999999998875 45788999888877777777888999999999999999999999983211
Q ss_pred cc------------------------------------------------------ccccccCCCCCCCeEEEEEeeecC
Q psy15667 195 IE------------------------------------------------------SFAFPFDGLPEGARTRVICGVTHG 220 (286)
Q Consensus 195 ~~------------------------------------------------------~~~~~~~~~~~g~~~~l~c~~~~~ 220 (286)
+. ....+...+.+|+.+.|.|.+..+
T Consensus 567 l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~ 646 (816)
T 3dmk_A 567 LPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGG 646 (816)
T ss_dssp SCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCS
T ss_pred cccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCC
Confidence 00 000012235679999999998877
Q ss_pred CCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 221 DPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 221 ~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+++.+.|+|+|..+.......+.........|.|.++..+|+|.|+|.|.|.+|....++.|.|
T Consensus 647 ~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V 711 (816)
T 3dmk_A 647 DLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNV 711 (816)
T ss_dssp SSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECE
T ss_pred CCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEE
Confidence 77789999999998865545444443445678999999999999999999999999999988876
No 6
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=3.1e-35 Score=255.27 Aligned_cols=270 Identities=25% Similarity=0.451 Sum_probs=202.4
Q ss_pred CCeeEeccccccc---cCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC--CeeEeceEEecccceeEEEEEccccc-CCC
Q psy15667 2 PPILTYSFIEQTL---QPGPAVSLKCIASGNPTPDIGWTLDGFELPTN--NRFVIGQFVSGHGDVISHVNISHVTV-EDG 75 (286)
Q Consensus 2 ~p~~~~~~~~~~~---~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~I~~~~~-~D~ 75 (286)
||.|...+.+.++ .+|++++|.|.+.|+|.+.+.|+|||..+... .++.. .++ .|.|.++.. +|+
T Consensus 4 ~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~------~~~---~L~i~~~~~~~D~ 74 (382)
T 1cs6_A 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRL------VAG---DLVISNPVKAKDA 74 (382)
T ss_dssp EEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEE------ETT---EEEEESCCHHHHC
T ss_pred CCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEe------eCC---eEEEecccccccC
Confidence 7999999999886 79999999999999999999999999998743 34432 122 388999987 999
Q ss_pred eEEEEEEEcCCEEEE-----Ee----c-C------------------------CCCCeeEEEeeCCccCcCC--------
Q psy15667 76 GEYACVAENRAGTCE-----IT----P-Y------------------------DSGPYLIAWFKDGRQIPGR-------- 113 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~-----~~----~-~------------------------~~~~~~~~W~~~g~~l~~~-------- 113 (286)
|.|+|.|.|..|... +. + + ..+.+.+.|++++..+...
T Consensus 75 G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~ 154 (382)
T 1cs6_A 75 GSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS 154 (382)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEEC
T ss_pred EEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEe
Confidence 999999999887532 10 0 0 0123579999999875321
Q ss_pred CCcceEEEccCCCCCCeeEEEEEEcCCccee----eeeeEEEEcC------CCceec--CCceEEecCCCEEEEeeEeee
Q psy15667 114 TSSTSLVINPVGREDRGIYQCIARRSDGDVA----QGSAELQLGG------LPYVRL--IPKVTAIDGEGLSIKCPVAGY 181 (286)
Q Consensus 114 ~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~----~~~~~l~v~~------~~~~~~--~~~~~~~~g~~~~l~c~~~~~ 181 (286)
.....|.|.++..+|+|.|+|.+.|..|... .....|.+.. .|.+.. .....+..|+.+.|.|.+.+.
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~ 234 (382)
T 1cs6_A 155 QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGN 234 (382)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEE
T ss_pred cCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccC
Confidence 1236799999999999999999998764321 1123444321 232322 234667899999999999999
Q ss_pred cCCeEEEEEcCCcccc-----------------------c-------------------------ccccCCCCCCCeEEE
Q psy15667 182 PIEEVHWEKVPPKIES-----------------------F-------------------------AFPFDGLPEGARTRV 213 (286)
Q Consensus 182 p~~~v~w~~~~~~~~~-----------------------~-------------------------~~~~~~~~~g~~~~l 213 (286)
|.+.+.|.+....+.. + ......+.+|+.+.|
T Consensus 235 p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l 314 (382)
T 1cs6_A 235 PVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRW 314 (382)
T ss_dssp SCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEE
T ss_pred CCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEE
Confidence 9999999884322110 0 000123567999999
Q ss_pred EEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 214 ICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 214 ~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.+. |.|.+.+.|+|+|..+....++.+. .+.|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 315 ~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 315 SCVAS-GKPRPAVRWLRDGQPLASQNRIEVS-----GGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ECEEE-EESCCEEEEEETTEECCCCSSEEEE-----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEee-eecCCEEEEEECCEECCCCceEEEE-----CCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 99884 7888999999999998776555442 3479999999999999999999999999999999884
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-34 Score=252.47 Aligned_cols=272 Identities=26% Similarity=0.388 Sum_probs=202.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCCeeEEeeCCEEcCCC--CeeEeceEEecccceeEEEEEccc-----ccC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTPDIGWTLDGFELPTN--NRFVIGQFVSGHGDVISHVNISHV-----TVE 73 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~I~~~-----~~~ 73 (286)
+..|...+.++.+.+|+.++|.|.+.+ .|.+.+.|+|||..+... .++.. ...+ .|.|.++ +.+
T Consensus 21 ~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~----~~~~----~l~i~~~~~~~~~~~ 92 (403)
T 3laf_A 21 SLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQ----LPNG----SLLIQNILHSRHHKP 92 (403)
T ss_dssp SSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEE----CTTS----CEEECSCCCBTTBCS
T ss_pred eEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEE----ecCC----cEEEeeeeccCCCCC
Confidence 456788899999999999999999987 688999999999998642 33322 1122 2556666 788
Q ss_pred CCeEEEEEEEcCC-EEE-----EEe---------------------------cCCCCCeeEEEeeCCccCcCC-------
Q psy15667 74 DGGEYACVAENRA-GTC-----EIT---------------------------PYDSGPYLIAWFKDGRQIPGR------- 113 (286)
Q Consensus 74 D~G~Y~C~a~n~~-g~~-----~~~---------------------------~~~~~~~~~~W~~~g~~l~~~------- 113 (286)
|+|.|+|.|.|.. +.. .+. ....+++.+.|+|+|..+...
T Consensus 93 D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~ 172 (403)
T 3laf_A 93 DEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVV 172 (403)
T ss_dssp SCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEE
T ss_pred cceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEE
Confidence 9999999998642 221 110 001234589999999887421
Q ss_pred -CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce-------ecCCceEEecCCCEEEEeeEeeecCCe
Q psy15667 114 -TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV-------RLIPKVTAIDGEGLSIKCPVAGYPIEE 185 (286)
Q Consensus 114 -~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~-------~~~~~~~~~~g~~~~l~c~~~~~p~~~ 185 (286)
.....|.|.++..+|+|.|+|.+.|..+........+.+...|.+ .......+..|+.+.|.|.+.+.|.+.
T Consensus 173 ~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~ 252 (403)
T 3laf_A 173 VLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPS 252 (403)
T ss_dssp ECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCE
T ss_pred EcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCe
Confidence 124679999999999999999999987765444567777655432 122346677999999999999999999
Q ss_pred EEEEEcCCcccc---------------------------c-------------------------ccccCCCCCCCeEEE
Q psy15667 186 VHWEKVPPKIES---------------------------F-------------------------AFPFDGLPEGARTRV 213 (286)
Q Consensus 186 v~w~~~~~~~~~---------------------------~-------------------------~~~~~~~~~g~~~~l 213 (286)
+.|.+....+.. + ......+.+|+.+.|
T Consensus 253 ~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l 332 (403)
T 3laf_A 253 FTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEF 332 (403)
T ss_dssp EEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEE
T ss_pred EEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEE
Confidence 999983221100 0 000223668999999
Q ss_pred EEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 214 ICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 214 ~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.+. |.|.+.+.|+|+|..+.......+.. ...|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 333 ~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 333 ECAVS-GKPVPTVNWMKNGDVVIPSDYFQIVG----GSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp CCEEE-EESCCEEEEEETTEECCCSSSEEEET----TTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred EEEEe-eccCCEEEEEECCEECCCCCcEEEec----CccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 99985 67888999999999887665544432 3579999999999999999999999999999999885
No 8
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=253.05 Aligned_cols=270 Identities=15% Similarity=0.138 Sum_probs=180.9
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
.+.+.+.++.+.+|+++.|.|.+.|.|.|.+.|++++..++....+.. .......|.|.+++.+|+|.|+|.|.
T Consensus 50 ~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~------~~~~~~sL~I~~v~~~D~G~Y~C~a~ 123 (423)
T 3qs7_E 50 GTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL------QNRGVVSMVILKMTETQAGEYLLFIQ 123 (423)
T ss_dssp ------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEE
T ss_pred cceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceecc------ccceEEEEEEeecCcccCEEEEEEEE
Confidence 455666688999999999999999999999999999988765333211 11112358999999999999999999
Q ss_pred cCCEEEEEe----c--------------------------CCCCCeeEEEeeCCccCcCC---CCcceEEEcc-CCCCCC
Q psy15667 84 NRAGTCEIT----P--------------------------YDSGPYLIAWFKDGRQIPGR---TSSTSLVINP-VGREDR 129 (286)
Q Consensus 84 n~~g~~~~~----~--------------------------~~~~~~~~~W~~~g~~l~~~---~~~~~l~i~~-v~~~d~ 129 (286)
|..|..... . .+.+++.|+|+|++..+... .....+.... +..+|+
T Consensus 124 N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~ 203 (423)
T 3qs7_E 124 SEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFG 203 (423)
T ss_dssp C--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCS
T ss_pred cCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccC
Confidence 988764321 0 01245789999998765321 1111111111 257899
Q ss_pred eeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEee-ecCCeEEEEEcCCcccc-----------
Q psy15667 130 GIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAG-YPIEEVHWEKVPPKIES----------- 197 (286)
Q Consensus 130 G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~-~p~~~v~w~~~~~~~~~----------- 197 (286)
|.|+|.|.|..|......+.|.|...|.. ......+.+|+.+.|.|.+.| .|.|.+.|.+....+..
T Consensus 204 G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~-~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~ 282 (423)
T 3qs7_E 204 TDIRCCARNELGRECTRLFTIDLNQTPQT-TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYST 282 (423)
T ss_dssp SCEEEEEECSSCEEEEECEEEESSSCCCS-STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEET
T ss_pred eEEEEEEEcCCCCcceeeEEEEEecCCcc-CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccC
Confidence 99999999999876444567777655543 233567889999999999999 67799999985432100
Q ss_pred ---------ccc---------------------------------------ccCCCCCCCeEEEEEeeecCCCCCeEEEE
Q psy15667 198 ---------FAF---------------------------------------PFDGLPEGARTRVICGVTHGDPPLTIRWL 229 (286)
Q Consensus 198 ---------~~~---------------------------------------~~~~~~~g~~~~l~c~~~~~~p~~~~~W~ 229 (286)
+.. ....+.+|+.+.|.|.+. |.|.|.+.|+
T Consensus 283 ~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~-g~P~p~i~W~ 361 (423)
T 3qs7_E 283 NRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTWT 361 (423)
T ss_dssp TTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEE-EESCCEEEEE
T ss_pred CceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEE-EcCCCeEEEE
Confidence 000 012467899999999985 7788999999
Q ss_pred eCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 230 KDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
|+|..+....... .....+.+.....+|+|.|+|.|.|.+|....++.|.|+
T Consensus 362 k~g~~l~~~~~~~-----~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~ 413 (423)
T 3qs7_E 362 FSRKSFPCEQKGL-----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (423)
T ss_dssp ETTEEEECBCCBC-----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred ECCEECCCccccc-----cCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 9999885442100 001122235667899999999999999999999999874
No 9
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=1.6e-34 Score=251.16 Aligned_cols=266 Identities=25% Similarity=0.435 Sum_probs=196.3
Q ss_pred CCCeeEeccccc-cccCCCcEEEEEEeecCCCCeeEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCC----
Q psy15667 1 TPPILTYSFIEQ-TLQPGPAVSLKCIASGNPTPDIGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVED---- 74 (286)
Q Consensus 1 ~~p~~~~~~~~~-~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D---- 74 (286)
.||.|...+.+. .+.+|+.++|.|.+.|+|.|.+.|+| ||..+....++.. ...++ .|.|.+++.+|
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~---~~~~~----~L~i~~~~~~d~~~~ 74 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQ---ISSDG----KLVFPPFRAEDYRQE 74 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBE---ECSTT----EEEECCCCGGGCCHH
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceE---EcCCc----eEEecccChhhcccc
Confidence 379999988875 57899999999999999999999999 7887764333211 11122 48899999997
Q ss_pred --CeEEEEEEEcCCEEEE-----Ee----c-----------------------CCC---CCeeEEEeeCCccCcC-----
Q psy15667 75 --GGEYACVAENRAGTCE-----IT----P-----------------------YDS---GPYLIAWFKDGRQIPG----- 112 (286)
Q Consensus 75 --~G~Y~C~a~n~~g~~~-----~~----~-----------------------~~~---~~~~~~W~~~g~~l~~----- 112 (286)
+|.|+|.|.|..|... +. + ... +.+.+.|++++..+..
T Consensus 75 ~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~ 154 (388)
T 2v5m_A 75 VHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEY 154 (388)
T ss_dssp HHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCB
T ss_pred ccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCC
Confidence 9999999999988632 11 0 000 1267999999876532
Q ss_pred --C---CCcceEEEccCCCCCC-eeEEEEEEcCCcceeee---eeEEEEcCC-----Ccee--cCCceEEecCCCEEEEe
Q psy15667 113 --R---TSSTSLVINPVGREDR-GIYQCIARRSDGDVAQG---SAELQLGGL-----PYVR--LIPKVTAIDGEGLSIKC 176 (286)
Q Consensus 113 --~---~~~~~l~i~~v~~~d~-G~Y~C~a~~~~g~~~~~---~~~l~v~~~-----~~~~--~~~~~~~~~g~~~~l~c 176 (286)
+ .....|.|.++..+|+ |.|+|.+.|..+..... ...|.|..+ |... ......+.+|+.+.|.|
T Consensus 155 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C 234 (388)
T 2v5m_A 155 DGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLC 234 (388)
T ss_dssp TTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECC
T ss_pred CCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEE
Confidence 1 1246799999999999 99999999875432221 134555433 1111 12235678899999999
Q ss_pred eEeeecCCeEEEEEcCCcc---------------------cc----------c-------------------------cc
Q psy15667 177 PVAGYPIEEVHWEKVPPKI---------------------ES----------F-------------------------AF 200 (286)
Q Consensus 177 ~~~~~p~~~v~w~~~~~~~---------------------~~----------~-------------------------~~ 200 (286)
.+.|.|.|.+.|.+....+ .. | ..
T Consensus 235 ~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 314 (388)
T 2v5m_A 235 PAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP 314 (388)
T ss_dssp CCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEES
T ss_pred ECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCC
Confidence 9999999999999841100 00 0 00
Q ss_pred ccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 201 PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 201 ~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+...+.+|+.+.|.|.+. |.|.+.+.|+|+|..+... ...|.|.++..+|+|.|+|.|.|..|....+
T Consensus 315 ~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~i~~~-----------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 382 (388)
T 2v5m_A 315 PTQTVDFGRPAVFTCQYT-GNPIKTVSWMKDGKAIGHS-----------ESVLRIESVKKEDKGMYQCFVRNDRESAEAS 382 (388)
T ss_dssp SEEEECTTSCEEEEEEEE-EECCCEEEEEETTEECSCC-----------SSEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CcEEecCCCCEEEEEEec-cccCCeEEEEECCEECccC-----------CCEEEEecCChhhCEEEEEEEEcCCCcEEEE
Confidence 022367899999999984 7788999999999987542 3579999999999999999999999999999
Q ss_pred EEEEE
Q psy15667 281 SKLQV 285 (286)
Q Consensus 281 ~~L~V 285 (286)
+.|.|
T Consensus 383 ~~l~V 387 (388)
T 2v5m_A 383 AELKL 387 (388)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99987
No 10
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.6e-34 Score=251.64 Aligned_cols=271 Identities=23% Similarity=0.341 Sum_probs=200.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeec-CCCCeeEEeeCCEEcCCCC-eeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASG-NPTPDIGWTLDGFELPTNN-RFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
.||.|...+.++.+.+|+.++|.|.+.+ .|.+.+.|+|||..+.... ++.. . ..+ ..|.|.+++.+|+|.|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~----~-~~~--~~L~i~~~~~~D~G~Y 77 (395)
T 1bih_A 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAAL----R-KDE--GSLVFLRPQASDEGHY 77 (395)
T ss_dssp CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEE----C-TTS--CCEEESSCCGGGCEEE
T ss_pred CCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEE----e-cCC--ceEEEecCCCCCCcEE
Confidence 4899999999999999999999999998 8999999999999887554 2221 1 112 1488999999999999
Q ss_pred EEEEEcCCEEEE-----Ee------c-------------------C---CCCCeeEEEeeCCc---cCc------CC---
Q psy15667 79 ACVAENRAGTCE-----IT------P-------------------Y---DSGPYLIAWFKDGR---QIP------GR--- 113 (286)
Q Consensus 79 ~C~a~n~~g~~~-----~~------~-------------------~---~~~~~~~~W~~~g~---~l~------~~--- 113 (286)
+|.|.|..|... +. + . ..+.+.+.|++++. +.. .+
T Consensus 78 ~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 1bih_A 78 QCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157 (395)
T ss_dssp EEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEE
T ss_pred EEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEE
Confidence 999999877532 10 0 0 11346899999862 211 11
Q ss_pred CCcceEEEccCCCCCCe---eEEEEEEcCCcceeeeee--EEEEcCC----------CceecCCceEEecCCCEEEEeeE
Q psy15667 114 TSSTSLVINPVGREDRG---IYQCIARRSDGDVAQGSA--ELQLGGL----------PYVRLIPKVTAIDGEGLSIKCPV 178 (286)
Q Consensus 114 ~~~~~l~i~~v~~~d~G---~Y~C~a~~~~g~~~~~~~--~l~v~~~----------~~~~~~~~~~~~~g~~~~l~c~~ 178 (286)
...+.|.|.++..+|+| .|+|.+.|..+....... .+.+... |.+ ......+..|+.+.|.|.+
T Consensus 158 ~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~G~~v~l~C~~ 236 (395)
T 1bih_A 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY-VSKDMMAKAGDVTMIYCMY 236 (395)
T ss_dssp CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE-ECCSEEEETTSCEEEEEEE
T ss_pred cCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee-cCCceEEECCCcEEEEEEe
Confidence 12457999999999999 999999998876422211 1111111 111 2345678899999999999
Q ss_pred eeecCCeEEEEEcCCccc----------------ccc----------------------------------------cc-
Q psy15667 179 AGYPIEEVHWEKVPPKIE----------------SFA----------------------------------------FP- 201 (286)
Q Consensus 179 ~~~p~~~v~w~~~~~~~~----------------~~~----------------------------------------~~- 201 (286)
.+.|.+.+.|.+....+. .+. .+
T Consensus 237 ~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~ 316 (395)
T 1bih_A 237 GSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPE 316 (395)
T ss_dssp ECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCC
T ss_pred ccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCC
Confidence 999999999998421110 000 00
Q ss_pred c-CCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 202 F-DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 202 ~-~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
. ..+.+|+.+.|.|.+. |.|.+.+.|+|+|..+... ++.+. .+.|.|.++..+|+|.|+|.|.|..|....+
T Consensus 317 ~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~-~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 389 (395)
T 1bih_A 317 KVIVVKQGQDVTIPCKVT-GLPAPNVVWSHNAKPLSGG-RATVT-----DSGLVIKGVKNGDKGYYGCRATNEHGDKYFE 389 (395)
T ss_dssp SEEEECTTSCEEEECEEE-EESCCCCEEEETTEECCSS-SEEEE-----TTEEEESSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred cceEecCCCeEEEEEEEC-cccCCeeEEEECCEECCCC-ceEEE-----CCEEEEeeCCcccCEEEEEEEEccCCCceEE
Confidence 1 2467899999999986 7888999999999988654 33332 2389999999999999999999999999999
Q ss_pred EEEEEC
Q psy15667 281 SKLQVK 286 (286)
Q Consensus 281 ~~L~V~ 286 (286)
+.|.|.
T Consensus 390 ~~l~V~ 395 (395)
T 1bih_A 390 TLVQVN 395 (395)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999873
No 11
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.1e-33 Score=236.31 Aligned_cols=243 Identities=24% Similarity=0.378 Sum_probs=171.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCC-CCeeEEee-CCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNP-TPDIGWTL-DGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-~p~v~W~~-~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+||.|...+.++.+.+|+.++|.|.+.+.| .+.+.|++ ||..+.. ..++.+.. .+.....|.|.+++.+|+|.
T Consensus 1 r~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~----~~~~~~~L~i~~~~~~D~G~ 76 (291)
T 1qz1_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVW----NDDDSSTLTIYNANIDDAGI 76 (291)
T ss_dssp -CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEE----EETTEEEEEECSCCGGGCEE
T ss_pred CCcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEE----cCCCeEEEEEecCCCCCCEE
Confidence 689999999999999999999999999987 69999999 7877764 34443211 11123469999999999999
Q ss_pred EEEEEEcCCEEE-----EEec---------------------------CCCCCeeEEEeeCCccCcCC-------CCcce
Q psy15667 78 YACVAENRAGTC-----EITP---------------------------YDSGPYLIAWFKDGRQIPGR-------TSSTS 118 (286)
Q Consensus 78 Y~C~a~n~~g~~-----~~~~---------------------------~~~~~~~~~W~~~g~~l~~~-------~~~~~ 118 (286)
|+|.|.|..|.. .+.. ...+++.+.|+++|..+... .....
T Consensus 77 Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 156 (291)
T 1qz1_A 77 YKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY 156 (291)
T ss_dssp EEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSC
T ss_pred EEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCc
Confidence 999999987421 1110 01234679999999877431 23467
Q ss_pred EEEccCCCCCCeeEEEEEEcCCcc-eeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccc
Q psy15667 119 LVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIES 197 (286)
Q Consensus 119 l~i~~v~~~d~G~Y~C~a~~~~g~-~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~ 197 (286)
|.|.++..+|+|.|+|.+.|..+. .......+.|..+|.+......
T Consensus 157 L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~--------------------------------- 203 (291)
T 1qz1_A 157 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSI--------------------------------- 203 (291)
T ss_dssp EEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSE---------------------------------
T ss_pred EEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccc---------------------------------
Confidence 999999999999999999986543 2223445555433332221110
Q ss_pred cccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC--ceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 198 FAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP--VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 198 ~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
....+.+|+.+.|.|.+. |.|.|.+.|+|+|..+..... ..+... .....|.|.++..+|+|.|+|.|.|..|
T Consensus 204 ---~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 278 (291)
T 1qz1_A 204 ---VNATANLGQSVTLVCDAD-GFPEPTMSWTKDGEPIENEEEDDEKHIFS-DDSSELTIRNVDKNDEAEYVCIAENKAG 278 (291)
T ss_dssp ---EEEETTSCCCEEEEEEEE-EESCCEEEEEETTEECCCC--CCSSEEEC-TTSCEEEECSCCGGGCEEEEEEEEETTE
T ss_pred ---cccccccCceEEEEEEEE-EeCCCcEEEEECCEECcCCCCCCcceEEc-CCCcEEEEEecChhcCEEEEEEEEeCCC
Confidence 011245666666666654 566778889999988865431 112211 2246899999999999999999999999
Q ss_pred ceeeEEEEEE
Q psy15667 276 QARYSSKLQV 285 (286)
Q Consensus 276 ~~~~~~~L~V 285 (286)
....++.|.|
T Consensus 279 ~~~~~~~l~V 288 (291)
T 1qz1_A 279 EQDASIHLKV 288 (291)
T ss_dssp EEEEEEEEEE
T ss_pred ceEEEEEEEE
Confidence 9999999987
No 12
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=236.64 Aligned_cols=254 Identities=21% Similarity=0.299 Sum_probs=175.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|. .+.+..+.+|++++|.|.+.+. |.+.+.|++||..+..+.++.+. .+. ..|.|.+++.+|+|.|+
T Consensus 6 ~~P~~~-~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~-----~~~--~~L~i~~~~~~d~G~Y~ 77 (317)
T 2y25_A 6 TGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK-----DGI--CTLLITEFSKKDAGIYE 77 (317)
T ss_dssp SCCEEE-EEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC----------CC--EEEEETTCCSTTCSCEE
T ss_pred CCCcEe-eeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE-----CCe--EEEEEccCCcccCeEEE
Confidence 378888 4557899999999999999987 88999999999999876665432 122 35999999999999999
Q ss_pred EEEEcCCEEEEEe-------------------------------cCC----------CCCeeEEEeeCCccCcCCC----
Q psy15667 80 CVAENRAGTCEIT-------------------------------PYD----------SGPYLIAWFKDGRQIPGRT---- 114 (286)
Q Consensus 80 C~a~n~~g~~~~~-------------------------------~~~----------~~~~~~~W~~~g~~l~~~~---- 114 (286)
|.|.|..|..... ... .+++.+.|++||..+....
T Consensus 78 C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 157 (317)
T 2y25_A 78 VILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKT 157 (317)
T ss_dssp EEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEE
T ss_pred EEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEE
Confidence 9999988764321 001 2457899999999886422
Q ss_pred ----CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCc--eec--CCceEEecCCCEEEEeeEeeecCCeE
Q psy15667 115 ----SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPY--VRL--IPKVTAIDGEGLSIKCPVAGYPIEEV 186 (286)
Q Consensus 115 ----~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~--~~~--~~~~~~~~g~~~~l~c~~~~~p~~~v 186 (286)
....|.|.++..+|+|.|+|.+.|..|.. .....+.+..... ... ........ .+.|.+
T Consensus 158 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~------------~~~p~~ 224 (317)
T 2y25_A 158 GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH-QKTVDLSGQAYDEAYAEFQRLKQAAIAE------------KNRARV 224 (317)
T ss_dssp EECSSEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEEEECHHHHHHHHHHHHHHHHHHHHT------------TTSCEE
T ss_pred eccCCEEEEEECcCCcccCeeEEEEEEeCCceE-EEEEEEeeeeccccchhhcccCCcccCc------------CCCCcc
Confidence 12349999999999999999999988764 3344444321000 000 00000000 000000
Q ss_pred EEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEE
Q psy15667 187 HWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEY 266 (286)
Q Consensus 187 ~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 266 (286)
. ...+ ....+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....++.+.........|.|.++..+|+|.|
T Consensus 225 ~--~~~~-------~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 294 (317)
T 2y25_A 225 L--GGLP-------DVVTIQEGKALNLTCNVW-GDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKY 294 (317)
T ss_dssp E--EBCC-------SEEEEETTSBBCEEEEEE-CSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEE
T ss_pred c--ccCC-------ccEEEEcCCEEEEEEEEe-cCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEE
Confidence 0 0000 011245677777777764 67888899999999887766655544333346899999999999999
Q ss_pred EEEEEecccceeeEEEEEE
Q psy15667 267 TCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 267 ~C~a~N~~g~~~~~~~L~V 285 (286)
+|.|.|..|....++.|.|
T Consensus 295 ~C~a~N~~g~~~~~~~l~V 313 (317)
T 2y25_A 295 GLVVKNKYGSETSDFTVSV 313 (317)
T ss_dssp EEEEEETTEEEEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEEE
Confidence 9999999999999999987
No 13
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=236.65 Aligned_cols=236 Identities=25% Similarity=0.444 Sum_probs=162.9
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEccccc-CCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTV-EDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~-~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.|.+.|+++|..+... ++.+.. ..++ ....|.|.+++. +|+|.|+
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~--~~~~-~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIE--FDES-AGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEE--ETTT-TEEEEEECSCCTTTTCSEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEE--ecCC-CceEEEEecccccCCCeEEE
Confidence 4899999999999999999999999999999999999999988654 332211 1122 124599999998 9999999
Q ss_pred EEEEcCCEEEE------Ee---------c-----------------------CCCCCeeEEEeeCCccCcCC--------
Q psy15667 80 CVAENRAGTCE------IT---------P-----------------------YDSGPYLIAWFKDGRQIPGR-------- 113 (286)
Q Consensus 80 C~a~n~~g~~~------~~---------~-----------------------~~~~~~~~~W~~~g~~l~~~-------- 113 (286)
|.|.|..|... +. + .+.+++.+.|+|+|..+...
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe
Confidence 99999877521 10 0 01234579999999887431
Q ss_pred CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC---CceecCCceEEecCCCEEEEeeEeeecCCeEEEEE
Q psy15667 114 TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL---PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEK 190 (286)
Q Consensus 114 ~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~ 190 (286)
.....|.|.++..+|+|.|+|.+.|..|......+.|.|... |.+...+
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~---------------------------- 212 (304)
T 2yd9_A 161 LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILP---------------------------- 212 (304)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECC----------------------------
T ss_pred CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecC----------------------------
Confidence 234589999999999999999999988865433345554311 1111110
Q ss_pred cCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEE
Q psy15667 191 VPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVA 270 (286)
Q Consensus 191 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 270 (286)
....+.+|+.+.|.|.+. |.|.|.+.|+|+|..+....... .....|.|.++ +|+|.|+|.|
T Consensus 213 ----------~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~-----~~~~~L~i~~~--~d~G~Y~C~a 274 (304)
T 2yd9_A 213 ----------MSHEIMPGGNVNITCVAV-GSPMPYVKWMQGAEDLTPEDDMP-----VGRNVLELTDV--KDSANYTCVA 274 (304)
T ss_dssp ----------CCBCCCTTCCEEEEEEEE-EESCCEEEEEETTEECSCSSSCC-----BSEEEEEECSC--CSCEEEEEEE
T ss_pred ----------CceEEcCCCeEEEEEEEe-eeCCCEEEEEECCEECCCccccc-----CCcEEEEEccc--ccCEEEEEEE
Confidence 112356777777777764 66778899999999886543321 12345666655 6999999999
Q ss_pred EecccceeeEEEEEEC
Q psy15667 271 SNTAAQARYSSKLQVK 286 (286)
Q Consensus 271 ~N~~g~~~~~~~L~V~ 286 (286)
.|..|....++.|.|+
T Consensus 275 ~N~~G~~~~~~~l~V~ 290 (304)
T 2yd9_A 275 MSSLGVIEAVAQITVK 290 (304)
T ss_dssp EETTEEEEEEEEEC--
T ss_pred EeCCCcEEEEEEEEEe
Confidence 9999999999999874
No 14
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=3.8e-34 Score=249.81 Aligned_cols=278 Identities=22% Similarity=0.349 Sum_probs=196.0
Q ss_pred CCeeEe-ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC--CeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTY-SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN--NRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~-~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.|.. .+.++.+.+|++++|.|.+.|+|.+.+.|+|||..+... .++... ...+.....+.+.+++.+|+|.|
T Consensus 16 ~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~---~~~~~l~i~~~~~~~~~~D~G~Y 92 (404)
T 3p3y_A 16 PPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMR---RRSGTLVIDFRSGGRPEEYEGEY 92 (404)
T ss_dssp CCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCC---SSSCCCBCCCTTTCCTTSSCEEE
T ss_pred CCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEe---cCCceEEEEeccCCCCccCCEEE
Confidence 777775 467779999999999999999999999999999987532 232211 11222111122248899999999
Q ss_pred EEEEEcCCEEEE-----Eec-----------------------------CCCCCeeEEEeeCCccCc-CC-----CCcce
Q psy15667 79 ACVAENRAGTCE-----ITP-----------------------------YDSGPYLIAWFKDGRQIP-GR-----TSSTS 118 (286)
Q Consensus 79 ~C~a~n~~g~~~-----~~~-----------------------------~~~~~~~~~W~~~g~~l~-~~-----~~~~~ 118 (286)
+|.|.|..|... +.. ...+.+.+.|++++.... .. ...+.
T Consensus 93 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 172 (404)
T 3p3y_A 93 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGD 172 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSC
T ss_pred EEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCc
Confidence 999999877542 110 011345799999875432 21 13467
Q ss_pred EEEccCCCCC-CeeEEEEEEcCCcceeee--eeEEEEcCC-------CceecC----CceEEecCCCEEEEeeEeeecCC
Q psy15667 119 LVINPVGRED-RGIYQCIARRSDGDVAQG--SAELQLGGL-------PYVRLI----PKVTAIDGEGLSIKCPVAGYPIE 184 (286)
Q Consensus 119 l~i~~v~~~d-~G~Y~C~a~~~~g~~~~~--~~~l~v~~~-------~~~~~~----~~~~~~~g~~~~l~c~~~~~p~~ 184 (286)
|.|.++..+| +|.|+|.+.|..+..... ...+.+... |.+... ....+..|+.+.|.|.+.+.|.+
T Consensus 173 l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~ 252 (404)
T 3p3y_A 173 LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP 252 (404)
T ss_dssp EEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC
T ss_pred EEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC
Confidence 9999999999 599999999987754222 244444321 211111 12457789999999999999999
Q ss_pred eEEEEEcCCcccc--------------------------c-------------------------ccccCCCCCCCeEEE
Q psy15667 185 EVHWEKVPPKIES--------------------------F-------------------------AFPFDGLPEGARTRV 213 (286)
Q Consensus 185 ~v~w~~~~~~~~~--------------------------~-------------------------~~~~~~~~~g~~~~l 213 (286)
.+.|.+....+.. + ......+.+|+.+.|
T Consensus 253 ~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l 332 (404)
T 3p3y_A 253 DIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRL 332 (404)
T ss_dssp EEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEE
T ss_pred cEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEE
Confidence 9999984322110 0 000233678999999
Q ss_pred EEeeecCCCCCeEEEEeCCeeCCCCC-CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 214 ICGVTHGDPPLTIRWLKDGKPLSPRF-PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 214 ~c~~~~~~p~~~~~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.+. |.|.+.+.|+|+|..+.... ....... +..|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 333 ~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 333 VCRAN-GNPKPTVQWMVNGEPLQSAPPNPNREVA---GDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp ECEEE-EESCCEEEEEETTEEGGGSCCCTTEEEE---TTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEcc-ccCCCceEEEECCEecCCCCCCceEEec---CCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 99885 68889999999999886443 1122211 3479999999999999999999999999999999873
No 15
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-33 Score=231.71 Aligned_cols=239 Identities=23% Similarity=0.405 Sum_probs=174.6
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.+|.|...+.++.+.+|+.++|.|.+.|.|. .+.|++ +|..+..+.++.+.. .+ ....|.|.+++.+|+|.|+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~----~~-~~~~L~i~~~~~~D~G~Y~ 76 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQK----EG-VRSRLTIYNANIEDAGIYR 76 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEE----ET-TEEEEEECSCCGGGCEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEec----CC-CEEEEEEccCCcccCEEEE
Confidence 4799999999999999999999999999885 899999 777777666665421 22 2346999999999999999
Q ss_pred EEEEcCCEEEE-----Ee----c-----------------------CCCCCeeEEEeeCCccCcCC-------CCcceEE
Q psy15667 80 CVAENRAGTCE-----IT----P-----------------------YDSGPYLIAWFKDGRQIPGR-------TSSTSLV 120 (286)
Q Consensus 80 C~a~n~~g~~~-----~~----~-----------------------~~~~~~~~~W~~~g~~l~~~-------~~~~~l~ 120 (286)
|.|.|..|... +. + ...+++.+.|++++..+... .....|.
T Consensus 77 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~ 156 (291)
T 2wim_A 77 CQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ 156 (291)
T ss_dssp EEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEE
T ss_pred EEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEE
Confidence 99999876321 11 0 01234579999999876431 1346799
Q ss_pred EccCCCCCCeeEEEEEEcCCcce-eeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccc
Q psy15667 121 INPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFA 199 (286)
Q Consensus 121 i~~v~~~d~G~Y~C~a~~~~g~~-~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~ 199 (286)
|.++..+|+|.|+|.+.|..+.. ......+.+..+|.+...+..
T Consensus 157 i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~----------------------------------- 201 (291)
T 2wim_A 157 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKS----------------------------------- 201 (291)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSE-----------------------------------
T ss_pred EEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCccc-----------------------------------
Confidence 99999999999999999876442 223344555443332211110
Q ss_pred cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 200 FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 200 ~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
....+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....++.+. .....|.|.++..+|+|.|+|.|.|..|....
T Consensus 202 -~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 276 (291)
T 2wim_A 202 -FNATAERGEEMTFSCRAS-GSPEPAISWFRNGKLIEENEKYILK---GSNTELTVRNIINSDGGPYVCRATNKAGEDEK 276 (291)
T ss_dssp -EECCSSSCCEEEEECBCC-CBSCCEEEEEETTEECCCTTTEEEC---STTCEEEEESCCSTTCEEEEEEEEETTEEEEE
T ss_pred -ccceecCCCeEEEEEEee-cCCCCeEEEEECCEECcCCccEEEc---CCccEEEEeeCCcccCEEEEEEEEECCCceee
Confidence 012356788888888874 6788899999999998766554432 22468999999999999999999999999999
Q ss_pred EEEEEE
Q psy15667 280 SSKLQV 285 (286)
Q Consensus 280 ~~~L~V 285 (286)
++.|.|
T Consensus 277 ~~~l~v 282 (291)
T 2wim_A 277 QAFLQV 282 (291)
T ss_dssp EEEEEC
T ss_pred eEEEEE
Confidence 999986
No 16
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=5e-33 Score=263.66 Aligned_cols=279 Identities=30% Similarity=0.579 Sum_probs=211.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|+.+.|.|.+.|+|.|.+.|+++|..+..+.++...+....+++....|.|.++..+|+|.|+|.
T Consensus 429 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 508 (816)
T 3dmk_A 429 PPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCI 508 (816)
T ss_dssp CCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEE
T ss_pred CCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEE
Confidence 78888888888999999999999999999999999999999987777765554444555556799999999999999999
Q ss_pred EEcCCEEEEEe----c--------------------------CCCCCeeEEEeeCCccCcCCC-----CcceEEEccCC-
Q psy15667 82 AENRAGTCEIT----P--------------------------YDSGPYLIAWFKDGRQIPGRT-----SSTSLVINPVG- 125 (286)
Q Consensus 82 a~n~~g~~~~~----~--------------------------~~~~~~~~~W~~~g~~l~~~~-----~~~~l~i~~v~- 125 (286)
|.|..|..... . ...+++.+.|+|||..+.... ..+.|.|.++.
T Consensus 509 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~ 588 (816)
T 3dmk_A 509 AKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVER 588 (816)
T ss_dssp EEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCH
T ss_pred EEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCc
Confidence 99998864321 0 012345799999999886432 35689999998
Q ss_pred CCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC--CceEEecCCCEEEEeeEeeecCC-eEEEEEcCCcccc-----
Q psy15667 126 REDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI--PKVTAIDGEGLSIKCPVAGYPIE-EVHWEKVPPKIES----- 197 (286)
Q Consensus 126 ~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~p~~-~v~w~~~~~~~~~----- 197 (286)
.+|+|.|+|.|.|..|........+.+...|.+... ....+..|+.++|.|.+.+.|.+ .+.|.+....+..
T Consensus 589 ~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~ 668 (816)
T 3dmk_A 589 NSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGIT 668 (816)
T ss_dssp HHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCE
T ss_pred cccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCee
Confidence 599999999999998865555667777666554322 34557789999999999876654 8999985422210
Q ss_pred -------------------------c-------------------------ccccCCCCCCCeEEEEEeeecCCCCCeEE
Q psy15667 198 -------------------------F-------------------------AFPFDGLPEGARTRVICGVTHGDPPLTIR 227 (286)
Q Consensus 198 -------------------------~-------------------------~~~~~~~~~g~~~~l~c~~~~~~p~~~~~ 227 (286)
+ ......+.+|+.+.|.|.+. |.|.|.+.
T Consensus 669 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~-g~P~p~i~ 747 (816)
T 3dmk_A 669 TSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKAD-GFPKPQVT 747 (816)
T ss_dssp EEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEE-EESCCEEE
T ss_pred EEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEe-cCCCCeEE
Confidence 0 00012355799999999985 78889999
Q ss_pred EEeCCeeCCCCCC-----ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 228 WLKDGKPLSPRFP-----VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 228 W~~~g~~~~~~~~-----~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
|+|++..+..... ..+.. .++.|.|.++..+|+|.|+|.|.|.+|.+..++.+.
T Consensus 748 W~k~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~ 806 (816)
T 3dmk_A 748 WKKAVGDTPGEYKDLKKSDNIRV---EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMI 806 (816)
T ss_dssp CCEECSSSTTCCBCCCCBTTEEE---ETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEE
T ss_pred EEecCCCCCccccccccCCCEEe---cCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEE
Confidence 9998865532211 00111 134799999999999999999999999999888765
No 17
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=1.4e-32 Score=254.10 Aligned_cols=263 Identities=20% Similarity=0.309 Sum_probs=199.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|+.+.+.+.+..+.+|+.++|.|.+.|+|.|.+.|++||..+..+. .|.|.+++.+|+|.|+|.
T Consensus 203 p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~~~----------------~L~i~~~~~~d~G~Y~C~ 266 (642)
T 1e07_A 203 PDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQ----------------ELFIPNITVNNSGSYTCQ 266 (642)
T ss_pred CCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcccCC----------------ceEEecccccCCeEEEEE
Confidence 4445566677789999999999999999999999999998874321 378999999999999999
Q ss_pred EEcCCEEEE------Eec----------------------------CCCCCeeEEEeeCCccCcCC------CCcceEEE
Q psy15667 82 AENRAGTCE------ITP----------------------------YDSGPYLIAWFKDGRQIPGR------TSSTSLVI 121 (286)
Q Consensus 82 a~n~~g~~~------~~~----------------------------~~~~~~~~~W~~~g~~l~~~------~~~~~l~i 121 (286)
|.|..|... +.. ....++.+.|++||+.+... .....|.|
T Consensus 267 a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p~~v~W~~~g~~l~~~~~~~~~~~~~~L~i 346 (642)
T 1e07_A 267 AHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTL 346 (642)
T ss_pred EEeCCCceEEeeeEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCCccEEEEECCccCCCcCCEEEeCCCCEEEE
Confidence 999776321 100 00124578999999987542 12467999
Q ss_pred ccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee--cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccc--
Q psy15667 122 NPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR--LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIES-- 197 (286)
Q Consensus 122 ~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~--~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~-- 197 (286)
.++..+|+|.|+|.|.|..|...+..+.|.|...|... ......+..|+.+.|.|.+.|.|.+.+.|.+....+..
T Consensus 347 ~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~ 426 (642)
T 1e07_A 347 LSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQ 426 (642)
T ss_pred eccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCc
Confidence 99999999999999999988754556778886555322 22345677899999999999999999999983211100
Q ss_pred ---------------------------------c------c------cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCC
Q psy15667 198 ---------------------------------F------A------FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDG 232 (286)
Q Consensus 198 ---------------------------------~------~------~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g 232 (286)
. . .+...+.+|+.+.|.|.+. .|.+.+.|+|+|
T Consensus 427 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~--~~~~~i~W~~~g 504 (642)
T 1e07_A 427 ELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPE--AQNTTYLWWVNG 504 (642)
T ss_pred eEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECC--CCCcEEEEEECC
Confidence 0 0 0012356899999999987 478999999999
Q ss_pred eeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceee-EEEEEE
Q psy15667 233 KPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY-SSKLQV 285 (286)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~-~~~L~V 285 (286)
..+....++.+.. .+..|.|.++..+|+|.|+|.|.|..|.... ++.|.|
T Consensus 505 ~~l~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 555 (642)
T 1e07_A 505 QSLPVSPRLQLSN---GNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDV 555 (642)
T ss_pred EeCCCCCcEEEcC---CCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEE
Confidence 9987766555432 2458999999999999999999999997544 567766
No 18
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=9.2e-33 Score=249.43 Aligned_cols=266 Identities=15% Similarity=0.139 Sum_probs=188.0
Q ss_pred ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG 87 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g 87 (286)
......+.+|++++|.|.+.+.|...+.|++++..|.....+... + ....+|.|.+++.+|+|.|+|.|.|..+
T Consensus 54 ~~~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~-----~-r~~~SL~I~~v~~~D~G~Y~C~~~n~~~ 127 (527)
T 3qs9_E 54 EAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQ-----N-RGVVSMVILKMTETQAGEYLLFIQSEAT 127 (527)
T ss_dssp --CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----------CEEEEEESSCCSSSCSEEEEEEEC--C
T ss_pred eeeeEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCC-----c-ceEEEEEECcCChhhCeeEEEEEEeccc
Confidence 344688999999999999999888999999999987654444211 1 1224599999999999999999999877
Q ss_pred EEEE------e------------------------cCCCCCeeEEEeeCCccCcCC--CCcc--eEEEccCCCCCCeeEE
Q psy15667 88 TCEI------T------------------------PYDSGPYLIAWFKDGRQIPGR--TSST--SLVINPVGREDRGIYQ 133 (286)
Q Consensus 88 ~~~~------~------------------------~~~~~~~~~~W~~~g~~l~~~--~~~~--~l~i~~v~~~d~G~Y~ 133 (286)
.... . ..+.+++.+.|++++..+... .... ......+..+|+|.|+
T Consensus 128 ~~~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~ 207 (527)
T 3qs9_E 128 NYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIR 207 (527)
T ss_dssp EEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEE
T ss_pred cEEEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEeeeeccccCCEEEE
Confidence 5431 1 011245789999988765321 1111 1223345689999999
Q ss_pred EEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEe-eecCCeEEEEEcCCcccc---------------
Q psy15667 134 CIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVA-GYPIEEVHWEKVPPKIES--------------- 197 (286)
Q Consensus 134 C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~-~~p~~~v~w~~~~~~~~~--------------- 197 (286)
|.|.|..|......+.|.|...|.. ......+.+|+.+.|.|.+. +.|.+.+.|.+....+..
T Consensus 208 C~A~N~~G~~~~~~~~l~V~~~p~~-~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~ 286 (527)
T 3qs9_E 208 CCARNELGRECTRLFTIDLNQTPQT-TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTM 286 (527)
T ss_dssp EEEECSSCEEEEECEEEESSSCCCC-SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEE
T ss_pred EEEEeCCCcccceEEEEEEeccCcc-CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcce
Confidence 9999999876544477777666554 33456778999999999997 899999999985432100
Q ss_pred -----c---------------c---------------------c---ccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCe
Q psy15667 198 -----F---------------A---------------------F---PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK 233 (286)
Q Consensus 198 -----~---------------~---------------------~---~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~ 233 (286)
+ . . ....+.+|+.+.|.|.+. |.|.|.+.|+|+|.
T Consensus 287 ~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~k~g~ 365 (527)
T 3qs9_E 287 IRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTWTFSRK 365 (527)
T ss_dssp EEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEE-EESCCEEEEEETTE
T ss_pred eeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEE-ecCCCEEEEEECCE
Confidence 0 0 0 012467799999999885 67889999999999
Q ss_pred eCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 234 PLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+....+.. .....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 366 ~l~~~~~~~-----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~ 413 (527)
T 3qs9_E 366 SFPCEQKGL-----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (527)
T ss_dssp EEECBCCBC-----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred ECcCCcccc-----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 886543321 124578999999999999999999999999999888774
No 19
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=7.8e-32 Score=249.16 Aligned_cols=251 Identities=19% Similarity=0.359 Sum_probs=190.0
Q ss_pred cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEE-
Q psy15667 11 EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTC- 89 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~- 89 (286)
...+..|+++.|.|.+.+.| +.+.|++||..|..+.++.+.. .+ ..|.|.++..+|+|.|+|.|.|..|..
T Consensus 298 ~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~----~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 369 (642)
T 1e07_A 298 SNPVEDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSN----DN---RTLTLLSVTRNDVGPYECGIQNELSVDH 369 (642)
T ss_pred ceeEecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeC----CC---CEEEEeccCcccCeeEEEEEeCCCCCcc
Confidence 34566788899999999987 7899999999998776665421 11 258999999999999999999987631
Q ss_pred ----EEe----c------------------------CCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEE
Q psy15667 90 ----EIT----P------------------------YDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIAR 137 (286)
Q Consensus 90 ----~~~----~------------------------~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 137 (286)
.+. | .+.+++.+.|++||..+.. ...|.|.++..+|+|.|+|.|.
T Consensus 370 s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~---~~~L~i~~~~~~d~G~Y~C~a~ 446 (642)
T 1e07_A 370 SDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQH---TQELFISNITEKNSGLYTCQAN 446 (642)
T ss_pred eeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCC---CceEEEccCChhhCeEEEEEEE
Confidence 111 0 1123468999999988753 3579999999999999999999
Q ss_pred cCCcceee-eeeEEEEcC---CCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccc----------------
Q psy15667 138 RSDGDVAQ-GSAELQLGG---LPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIES---------------- 197 (286)
Q Consensus 138 ~~~g~~~~-~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~---------------- 197 (286)
|..|.... ....+.+.. +|.+...+...+..|+.+.|.|.+.+ |.+.+.|.+....+..
T Consensus 447 n~~g~~~~s~~~~v~v~~~~~~p~i~~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~~~~~L~i~ 525 (642)
T 1e07_A 447 NSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSNGNRTLTLF 525 (642)
T ss_pred cCCCCCcccceEEEEEeccCCCceEecCCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcCCCcEEEEe
Confidence 99876532 124455543 34454445566779999999999994 7889999873211100
Q ss_pred -----------c---------------------------ccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC
Q psy15667 198 -----------F---------------------------AFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 239 (286)
Q Consensus 198 -----------~---------------------------~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~ 239 (286)
+ ......+.+|+.+.|.|.+. |.|++.+.|+|+|..+..
T Consensus 526 ~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~g~~i~~-- 602 (642)
T 1e07_A 526 NVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSA-SNPSPQYSWRINGIPQQH-- 602 (642)
T ss_pred ecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEec-cCCCCeEEEEECCEECcc--
Confidence 0 00012346799999999985 788899999999997753
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
...|.|.++..+|+|.|+|.|.|.+|....++.|.|+
T Consensus 603 ----------~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 603 ----------TQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred ----------CceEEECcccccCCeEEEEEEEecccCcceeEEEEEE
Confidence 2468999999999999999999999999999988874
No 20
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=226.32 Aligned_cols=214 Identities=18% Similarity=0.281 Sum_probs=159.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCC-eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|.|...+.++.+.+|+.++|.|.+.+.|.+ .+.|+++|..+..... .|.|.+++.+|+|.|+|.
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~---------------~l~i~~~~~~d~G~Y~C~ 66 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTP---------------SYRITSASVNDSGEYRCQ 66 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCSS---------------EEEESSCCGGGCEEEEEE
T ss_pred CeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccCC---------------eEEEecCCcccCeEEEEE
Confidence 889999999999999999999999999988 9999999998864311 378999999999999999
Q ss_pred EEcCCEEE--EE--------------------------ec-CCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeE
Q psy15667 82 AENRAGTC--EI--------------------------TP-YDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIY 132 (286)
Q Consensus 82 a~n~~g~~--~~--------------------------~~-~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y 132 (286)
|.|..+.. .+ .. ...+++.+.|+++|..+........|.|.++..+|+|.|
T Consensus 67 ~~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y 146 (262)
T 3rjd_A 67 RGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTY 146 (262)
T ss_dssp ESSSCCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEE
T ss_pred EecCCccccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEE
Confidence 98865531 11 01 112346899999999886554457899999999999999
Q ss_pred EEEEEcCCcceeeeeeEEEEcC---CCceecCCceEEecCCCEEEEeeEeeecC-CeEEEEEcCCcccccccccCCCCCC
Q psy15667 133 QCIARRSDGDVAQGSAELQLGG---LPYVRLIPKVTAIDGEGLSIKCPVAGYPI-EEVHWEKVPPKIESFAFPFDGLPEG 208 (286)
Q Consensus 133 ~C~a~~~~g~~~~~~~~l~v~~---~~~~~~~~~~~~~~g~~~~l~c~~~~~p~-~~v~w~~~~~~~~~~~~~~~~~~~g 208 (286)
+|.+.|..+.. ...+.|.|.. .|.+...+...+..|+.+.|.|.+.+.|. |.+.|
T Consensus 147 ~C~~~n~~~~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~-------------------- 205 (262)
T 3rjd_A 147 HCSGMGKHRYT-SAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQL-------------------- 205 (262)
T ss_dssp EEEEESSSEEE-EECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----E--------------------
T ss_pred EEEEeCCCCcc-ccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccE--------------------
Confidence 99999987643 3456777753 23333333334555666666666655543 33322
Q ss_pred CeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 209 ARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 209 ~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
.+.|++++..+... .....|.|.++..+|+|.|+|.|.|..|..
T Consensus 206 ----------------~~~w~~~~~~~~~~---------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 206 ----------------YFSFYMGSKTLRGR---------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ----------------EEEEEETTEEEEEE---------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ----------------EEEEEeCCcEeccc---------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 36799999876421 124579999999999999999999999965
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=7.9e-32 Score=243.43 Aligned_cols=268 Identities=15% Similarity=0.302 Sum_probs=196.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.+ .+.|++++..+. . .... ..|.|.+++.+|+|.|+|
T Consensus 35 ~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~----~------~~~~---~~L~I~~~~~~D~G~Y~C 97 (524)
T 2ec8_A 35 SPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET----N------ENKQ---NEWITEKAEATNTGKYTC 97 (524)
T ss_dssp CCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC----E------EECS---SEEEESSCCSTTCEEEEE
T ss_pred CCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc----c------cCcc---ceEEEcccchhhCEEEEE
Confidence 3888888888889999999999999987 899999998762 1 0111 258999999999999999
Q ss_pred EEEcCC-EEEEEecC--------------------------CCCC-eeEEEee-CCccCcCC-----CCcceEEEccCCC
Q psy15667 81 VAENRA-GTCEITPY--------------------------DSGP-YLIAWFK-DGRQIPGR-----TSSTSLVINPVGR 126 (286)
Q Consensus 81 ~a~n~~-g~~~~~~~--------------------------~~~~-~~~~W~~-~g~~l~~~-----~~~~~l~i~~v~~ 126 (286)
.|.|.. ..+.+... ..++ +.+.||+ ||..+... .....|.|.++..
T Consensus 98 ~a~ng~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~ 177 (524)
T 2ec8_A 98 TNKHGLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKR 177 (524)
T ss_dssp EETTSCEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCG
T ss_pred eecCCcceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccch
Confidence 998821 11222100 0122 6899998 88877542 1346899999999
Q ss_pred CCCe-eEEEEEEcCCcceeeeeeEEEEc----CCCceecCC-ceEEecCCCEEEEeeEeeecCCe-EEEEEcCCcc--c-
Q psy15667 127 EDRG-IYQCIARRSDGDVAQGSAELQLG----GLPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEE-VHWEKVPPKI--E- 196 (286)
Q Consensus 127 ~d~G-~Y~C~a~~~~g~~~~~~~~l~v~----~~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~-v~w~~~~~~~--~- 196 (286)
+|+| .|+|.+.|..+...+..+.|.|. .+|.+...+ ...+.+|+.+.|.|.+.+.|.|. +.|.+....+ .
T Consensus 178 ~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~ 257 (524)
T 2ec8_A 178 AYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQE 257 (524)
T ss_dssp GGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCE
T ss_pred hhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccc
Confidence 9999 99999999877654446777775 445554433 45678999999999999999887 9999855441 0
Q ss_pred ----------------c---------------cc------------------------cc----cCCCCCCCeEEEEEee
Q psy15667 197 ----------------S---------------FA------------------------FP----FDGLPEGARTRVICGV 217 (286)
Q Consensus 197 ----------------~---------------~~------------------------~~----~~~~~~g~~~~l~c~~ 217 (286)
. +. .+ ...+.+|+.+.|.|.+
T Consensus 258 ~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~ 337 (524)
T 2ec8_A 258 KYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEY 337 (524)
T ss_dssp EEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEE
T ss_pred ccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEE
Confidence 0 00 00 1236789999999997
Q ss_pred ecCCCCCe-EEEEeCCeeCCCCCCceeeecCC----CeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 218 THGDPPLT-IRWLKDGKPLSPRFPVNVSDLDS----FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 218 ~~~~p~~~-~~W~~~g~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.|.|. +.|+|+|..+............. ....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 338 -~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 410 (524)
T 2ec8_A 338 -EAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVN 410 (524)
T ss_dssp -EEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -eecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEe
Confidence 4778888 99999999886554211111111 24689999999999999999999999999999999874
No 22
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.98 E-value=3.1e-30 Score=235.87 Aligned_cols=282 Identities=18% Similarity=0.246 Sum_probs=194.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCC-------------CCeeEeceEEecccceeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPT-------------NNRFVIGQFVSGHGDVISHVNI 67 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~-------------~~~~~~~~~~~~~~~~~~~l~I 67 (286)
||.|...+..+.+.+|++++|.|.+.+. |.+.+.|+|++..+.. ..|+.+.. .+.......|.|
T Consensus 112 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~~L~I 189 (585)
T 2ocw_A 112 GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDI--QGTGQLLFSVVI 189 (585)
T ss_pred CccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEe--ccCCCcEEEEEE
Confidence 6777777888899999999999999965 5678999999764210 23332211 111112236999
Q ss_pred cccccCCCeEEEEEEEcCCEEEE----Eec---------------------CCCCC---eeEEEe-eCCccCc-------
Q psy15667 68 SHVTVEDGGEYACVAENRAGTCE----ITP---------------------YDSGP---YLIAWF-KDGRQIP------- 111 (286)
Q Consensus 68 ~~~~~~D~G~Y~C~a~n~~g~~~----~~~---------------------~~~~~---~~~~W~-~~g~~l~------- 111 (286)
.+++.+|+|.|+|.|.|..|... +.. ...++ +.+.|+ +||..+.
T Consensus 190 ~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~ 269 (585)
T 2ocw_A 190 NQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLG 269 (585)
T ss_pred ccCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCC
Confidence 99999999999999999877421 110 01122 578896 8884211
Q ss_pred -------CCC------Ccc--eEEEccCCCCCCeeEEEEEEcCCcceee----eeeEEEEcCCCceecC-CceEEecCCC
Q psy15667 112 -------GRT------SST--SLVINPVGREDRGIYQCIARRSDGDVAQ----GSAELQLGGLPYVRLI-PKVTAIDGEG 171 (286)
Q Consensus 112 -------~~~------~~~--~l~i~~v~~~d~G~Y~C~a~~~~g~~~~----~~~~l~v~~~~~~~~~-~~~~~~~g~~ 171 (286)
.+. ..+ .|.|.++..+|+|.|+|.|.|. |.... ..+.|.|...|.+... ....+.+|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~ 348 (585)
T 2ocw_A 270 KRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSS 348 (585)
T ss_pred cCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccCCcceEEEeCCc
Confidence 110 122 6999999999999999999995 43321 4677888777665443 3466789999
Q ss_pred EEEEeeEeeecCCeE----EEEE--cCC--c----------------------------cc--c----------ccc---
Q psy15667 172 LSIKCPVAGYPIEEV----HWEK--VPP--K----------------------------IE--S----------FAF--- 200 (286)
Q Consensus 172 ~~l~c~~~~~p~~~v----~w~~--~~~--~----------------------------~~--~----------~~~--- 200 (286)
+.|.|.+.+.|.+.+ .|.+ ... . +. . |..
T Consensus 349 v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~an~~ 428 (585)
T 2ocw_A 349 VAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGD 428 (585)
T ss_pred EEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcccCC
Confidence 999999999999887 7987 221 0 00 0 000
Q ss_pred ---------------------ccCCCCCCCeEEEEEeeec---CCCCCeEEEEeCCeeCCCCCCce----eee--cCCCe
Q psy15667 201 ---------------------PFDGLPEGARTRVICGVTH---GDPPLTIRWLKDGKPLSPRFPVN----VSD--LDSFS 250 (286)
Q Consensus 201 ---------------------~~~~~~~g~~~~l~c~~~~---~~p~~~~~W~~~g~~~~~~~~~~----~~~--~~~~~ 250 (286)
....+.+|+.+.|.|.+.. +.|.+.+.|+|+|..+....... +.. .....
T Consensus 429 g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~ 508 (585)
T 2ocw_A 429 TLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRL 508 (585)
T ss_pred CccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccE
Confidence 0123567999999998863 67889999999998774432110 111 12234
Q ss_pred eeEEEcccCCCCCeEEEEEEEecccceeeE-EEEEEC
Q psy15667 251 SLLSINSVSAAHSGEYTCVASNTAAQARYS-SKLQVK 286 (286)
Q Consensus 251 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~L~V~ 286 (286)
..|.|.++..+|+|.|+|.|.|..|..... +.|.|+
T Consensus 509 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~ 545 (585)
T 2ocw_A 509 VSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVE 545 (585)
T ss_pred EEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEE
Confidence 689999999999999999999999866544 778774
No 23
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.98 E-value=2.4e-30 Score=233.70 Aligned_cols=272 Identities=21% Similarity=0.333 Sum_probs=183.0
Q ss_pred eccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EEcC------------CCCeeEeceEEecccceeEEEEEccccc
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FELP------------TNNRFVIGQFVSGHGDVISHVNISHVTV 72 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~l~------------~~~~~~~~~~~~~~~~~~~~l~I~~~~~ 72 (286)
..+.++++.+|++++|.|.+.+.|.+.+.|+|++ ..+. .+.|+... .......|.|.+++.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~L~I~~v~~ 79 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGS-----KSGTSASLAISGLEA 79 (523)
T ss_pred ccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEe-----cCCCEEEEEECCCCh
Confidence 3567789999999999999999999999999974 2211 12344311 112223699999999
Q ss_pred CCCeEEEEEEEcCCEE---------EEEe------c-----------------------CCCCC--eeEEEeeCCccCcC
Q psy15667 73 EDGGEYACVAENRAGT---------CEIT------P-----------------------YDSGP--YLIAWFKDGRQIPG 112 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g~---------~~~~------~-----------------------~~~~~--~~~~W~~~g~~l~~ 112 (286)
+|+|.|+|.|.|..|. ..+. | .+.+| ..+.|+|||..+..
T Consensus 80 ~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (523)
T 2rcj_C 80 EDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKA 159 (523)
T ss_pred hhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCC
Confidence 9999999999986531 1110 0 01122 38999999988753
Q ss_pred CC--------C------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE----cCCCcee-cCCceEEecCCCEE
Q psy15667 113 RT--------S------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL----GGLPYVR-LIPKVTAIDGEGLS 173 (286)
Q Consensus 113 ~~--------~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v----~~~~~~~-~~~~~~~~~g~~~~ 173 (286)
.. . ...|.|.++..+|+|.|+|.|.|..+.... ...+.+ ...|.+. ..+...+.+|+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~-~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~ 238 (523)
T 2rcj_C 160 GVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK-TVAPTECSASTKGPSVFPLAPSSKSTSGGTAA 238 (523)
T ss_pred ceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccc-ceeeeecCCCCcCCEEEecCCCcccccCCceE
Confidence 21 1 135999999999999999999998775422 233221 2234333 22334567899999
Q ss_pred EEeeEeee-cCC-eEEEEEcCCccc------------------ccc--------------------------------cc
Q psy15667 174 IKCPVAGY-PIE-EVHWEKVPPKIE------------------SFA--------------------------------FP 201 (286)
Q Consensus 174 l~c~~~~~-p~~-~v~w~~~~~~~~------------------~~~--------------------------------~~ 201 (286)
|.|.+.|. |.| .+.|.+....+. .+. .+
T Consensus 239 l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~dG~Y~C~a~n~~g~~~~~~~l~v~~~P 318 (523)
T 2rcj_C 239 LGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPLSLP 318 (523)
T ss_pred EEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCCceEEEEEEeCCCCcceEEecCCCcCc
Confidence 99999986 777 899998432100 000 00
Q ss_pred --------cCC-CCCCCeEEEEEeeecCCCC---CeEEEEeCCeeCCCCCCceeeec-C---CCeeeEEEcccCCCCCeE
Q psy15667 202 --------FDG-LPEGARTRVICGVTHGDPP---LTIRWLKDGKPLSPRFPVNVSDL-D---SFSSLLSINSVSAAHSGE 265 (286)
Q Consensus 202 --------~~~-~~~g~~~~l~c~~~~~~p~---~~~~W~~~g~~~~~~~~~~~~~~-~---~~~~~L~i~~v~~~d~G~ 265 (286)
... +.+|+.+.|.|.+....|+ +.+.|+|+|..+........... . .....|.|.++..+|+|.
T Consensus 319 ~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~ 398 (523)
T 2rcj_C 319 SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKE 398 (523)
T ss_pred eEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCe
Confidence 111 5679999999998754333 69999999998865432211111 1 113468999999999999
Q ss_pred EEEEEEecccceeeEEEEE
Q psy15667 266 YTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 266 Y~C~a~N~~g~~~~~~~L~ 284 (286)
|+|.|.|..|....+..|.
T Consensus 399 Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 399 YKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred EEEEEeCCCCCCceeEEEE
Confidence 9999999988766555443
No 24
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.98 E-value=1.7e-31 Score=241.23 Aligned_cols=272 Identities=18% Similarity=0.260 Sum_probs=181.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe-EEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG-EYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G-~Y~ 79 (286)
||.+...+.+..+.+|+.++|.|.+.+.|.+.+.|++ ||..+..+.++.+. ..+ .|.|.+++.+|+| .|+
T Consensus 114 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~----~~~----~L~i~~~~~~d~G~~Y~ 185 (524)
T 2ec8_A 114 PAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPD----PKA----GIMIKSVKRAYHRLCLH 185 (524)
T ss_dssp SSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEE----TTT----EEEEESCCGGGTTCEEE
T ss_pred CCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeEC----CCc----cEEEeccchhhCCceEE
Confidence 4555567777889999999999999987779999988 88888776666432 122 4889999999999 999
Q ss_pred EEEEcCCEEE-----EEec-------------------------------CCCCCe-eEEEeeCCccC--cC--------
Q psy15667 80 CVAENRAGTC-----EITP-------------------------------YDSGPY-LIAWFKDGRQI--PG-------- 112 (286)
Q Consensus 80 C~a~n~~g~~-----~~~~-------------------------------~~~~~~-~~~W~~~g~~l--~~-------- 112 (286)
|.|.|..+.. .+.. ...+++ .+.|++++..+ ..
T Consensus 186 C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~ 265 (524)
T 2ec8_A 186 CSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHG 265 (524)
T ss_dssp EEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECS
T ss_pred EEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCcccccccccccc
Confidence 9998765421 1100 011223 49999999883 21
Q ss_pred ---CCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCC----ceEEecCCCEEEEeeEeeecCCe
Q psy15667 113 ---RTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIP----KVTAIDGEGLSIKCPVAGYPIEE 185 (286)
Q Consensus 113 ---~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~----~~~~~~g~~~~l~c~~~~~p~~~ 185 (286)
......|.|.++..+|+|.|+|.|.|..|... ..+.|.|..+|.+...+ ...+..|+.+.|.|.+.|.|.|.
T Consensus 266 ~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~ 344 (524)
T 2ec8_A 266 DFNYERQATLTISSARVNDSGVFMCYANNTFGSAN-VTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE 344 (524)
T ss_dssp SSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEE-EEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCC
T ss_pred CCccceEEEEEECCCCHHHCEEEEEEEEecCCceE-EEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCc
Confidence 01246799999999999999999999988764 47888898887765432 46788999999999999999999
Q ss_pred -EEEEEcCCcccccc-------------------cc-------------------------------------cCCCCCC
Q psy15667 186 -VHWEKVPPKIESFA-------------------FP-------------------------------------FDGLPEG 208 (286)
Q Consensus 186 -v~w~~~~~~~~~~~-------------------~~-------------------------------------~~~~~~g 208 (286)
+.|.+....+.... .. .....+|
T Consensus 345 ~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g 424 (524)
T 2ec8_A 345 HQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNG 424 (524)
T ss_dssp EEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSS
T ss_pred EEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCc
Confidence 99998543221100 00 0112344
Q ss_pred CeEEEEEeeecCCCCCeEEEEeCCeeCCC-------CCCceeeecCCCeeeEE----EcccCCCCCeEEEEEEEecccce
Q psy15667 209 ARTRVICGVTHGDPPLTIRWLKDGKPLSP-------RFPVNVSDLDSFSSLLS----INSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 209 ~~~~l~c~~~~~~p~~~~~W~~~g~~~~~-------~~~~~~~~~~~~~~~L~----i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
.|.|.+. |.|.|.+.|+|++..+.. .............+.+. |.....+|+|.|+|.|.|.+|..
T Consensus 425 ---~l~C~~~-g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~ 500 (524)
T 2ec8_A 425 ---MLQCVAA-GFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKT 500 (524)
T ss_dssp ---CEEEEEE-EESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEE
T ss_pred ---EEEEEEE-eecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCce
Confidence 7899884 788999999999876521 11110000001122333 44445799999999999999999
Q ss_pred eeEEEEEEC
Q psy15667 278 RYSSKLQVK 286 (286)
Q Consensus 278 ~~~~~L~V~ 286 (286)
..++.|.|+
T Consensus 501 ~~~~~l~V~ 509 (524)
T 2ec8_A 501 SAYFNFAFK 509 (524)
T ss_dssp ECCCCCCC-
T ss_pred EEEEEEEEe
Confidence 998888764
No 25
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.98 E-value=1.1e-30 Score=222.52 Aligned_cols=232 Identities=19% Similarity=0.249 Sum_probs=158.8
Q ss_pred EeccccccccCCCcEEEEEEeecC---------CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 6 TYSFIEQTLQPGPAVSLKCIASGN---------PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 6 ~~~~~~~~~~~G~~~~l~C~~~g~---------p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
....++.++.+|++++|.|.+.+. |.+.+.|+|++..+....+.. .+. .|.|.+++.+|+|
T Consensus 33 ~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~-------~~~---~L~i~~v~~~D~G 102 (329)
T 3oq3_B 33 FGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRV-------KNG---DLWIANYTSNDSH 102 (329)
T ss_dssp EEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTE-------ETT---EEEESSCCGGGGG
T ss_pred cCCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCcee-------ecc---eEEEcCCChHhCC
Confidence 344466679999999999999884 668999999998765433321 111 4889999999999
Q ss_pred -EEEEEEEcCCEEEEE--------------------------------ecCCCC-CeeEEEeeCCccCcCCC-----Ccc
Q psy15667 77 -EYACVAENRAGTCEI--------------------------------TPYDSG-PYLIAWFKDGRQIPGRT-----SST 117 (286)
Q Consensus 77 -~Y~C~a~n~~g~~~~--------------------------------~~~~~~-~~~~~W~~~g~~l~~~~-----~~~ 117 (286)
.|+|.|.|..|.+.. ...+.+ ++.+.|+|++..+.... ...
T Consensus 103 s~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~ 182 (329)
T 3oq3_B 103 RRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQ 182 (329)
T ss_dssp CCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETT
T ss_pred CcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCC
Confidence 999999998753210 001123 47899999999885321 247
Q ss_pred eEEEccCCCCCCeeEEEEEEcC--Ccceee---eeeEEEEcCCC----ceecCCceEEecCCCEEEEeeEeeecCCeEEE
Q psy15667 118 SLVINPVGREDRGIYQCIARRS--DGDVAQ---GSAELQLGGLP----YVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHW 188 (286)
Q Consensus 118 ~l~i~~v~~~d~G~Y~C~a~~~--~g~~~~---~~~~l~v~~~~----~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w 188 (286)
.|.|.++..+|+|.|+|.|.|. .|.... ..+.|.|...+ .+...+...+.
T Consensus 183 ~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~--------------------- 241 (329)
T 3oq3_B 183 NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVT--------------------- 241 (329)
T ss_dssp EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEEC---------------------
T ss_pred EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEe---------------------
Confidence 8999999999999999999986 543311 12556665444 11112223333
Q ss_pred EEcCCcccccccccCCCCCCCeEEEEEeeecCC--CCC-eEEEEeCCeeCCC-CCCceee--e-cCCCeeeEEEcccCCC
Q psy15667 189 EKVPPKIESFAFPFDGLPEGARTRVICGVTHGD--PPL-TIRWLKDGKPLSP-RFPVNVS--D-LDSFSSLLSINSVSAA 261 (286)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~--p~~-~~~W~~~g~~~~~-~~~~~~~--~-~~~~~~~L~i~~v~~~ 261 (286)
+|+.+.|.|.+...+ +++ .+.|+|+|..+.. ....... . .......|.|.++..+
T Consensus 242 ------------------~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 303 (329)
T 3oq3_B 242 ------------------IGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEE 303 (329)
T ss_dssp ------------------TTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGG
T ss_pred ------------------cCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHH
Confidence 455555555544332 355 7788888887432 2221111 0 0013568999999999
Q ss_pred CCe-EEEEEEEecccceeeEEEEEEC
Q psy15667 262 HSG-EYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 262 d~G-~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
|+| .|+|.|.|..|....++.|.|+
T Consensus 304 D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 304 YIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp GTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred HCCCcEEEEEEecCCceEEEEEEEeC
Confidence 999 9999999999999999999886
No 26
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.8e-30 Score=216.25 Aligned_cols=245 Identities=15% Similarity=0.186 Sum_probs=159.4
Q ss_pred cccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEE-
Q psy15667 11 EQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGT- 88 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~- 88 (286)
.+.+.+|+.+.|.|... +.|.|.+.|+||+..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~ 84 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVES----KG-NKTKMTFKDLGMDDLGIYSCDVTDTDGIA 84 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEE----ET-TEEEEEESSCCGGGCEEEEEEESSSCCCC
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEE----eC-CEEEEEECcCCccCCEEEEEEEEeCCCcE
Confidence 45678999999999876 67999999999999998777776532 22 2246999999999999999999985542
Q ss_pred --EEE----------------------------------------ecC-CCCCeeEEEeeCCccCcCCC----------C
Q psy15667 89 --CEI----------------------------------------TPY-DSGPYLIAWFKDGRQIPGRT----------S 115 (286)
Q Consensus 89 --~~~----------------------------------------~~~-~~~~~~~~W~~~g~~l~~~~----------~ 115 (286)
..+ ... ..+++.+.|+++|..+.... .
T Consensus 85 ~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~ 164 (312)
T 2y23_A 85 SSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTG 164 (312)
T ss_dssp EEEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTT
T ss_pred EEEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCC
Confidence 111 111 23457899999998875421 1
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEee-EeeecCCeEEEEEcCCc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCP-VAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~-~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.++..+|+|.|+|.+.+..+.. ...+.+.............. .+. ......|.+.-.
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~p~~~~~----- 228 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATN---HSTVVLVGDVFKKLQKEAEF--------QRQEWIRKQGPHFVEY----- 228 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEE---EEEEEECTHHHHHHHHHHHH--------HHHHHHHHHSSEEEEE-----
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceE---EEEEEEcchhhhhhcccccc--------cccchhhccCCceeec-----
Confidence 2339999999999999999998754322 22333211000000000000 000 000000000000
Q ss_pred ccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 195 IESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
....+.+|+.+.|.|.+. +.|++ .+.|+|+|..+....++.+. .....|.|.++..+|+|.|+|.|.|.
T Consensus 229 ------~~~~v~~G~~~~l~C~~~-~~p~~~~v~W~~~g~~~~~~~~~~~~---~~~~~L~I~~v~~~d~G~Y~C~a~N~ 298 (312)
T 2y23_A 229 ------LSWEVTGECNVLLKCKVA-NIKKETHIVWYKDEREISVDEKHDFK---DGICTLLITEFSKKDAGIYEVILKDD 298 (312)
T ss_dssp ------EEEEEETTTEEEEEEEEE-SCCSSCEEEEEETTEEEEEECCC-------CEEEEEECSCSGGGCEEEEEEEEST
T ss_pred ------ceEEEeCCCEEEEEEEEc-CCCCCCEEEEeeCCEECCCCCcEEEE---CCEEEEEECcCCHHHCEEEEEEEEcC
Confidence 001244677777777765 44555 89999999988644444433 22468999999999999999999999
Q ss_pred ccceeeEEEEEEC
Q psy15667 274 AAQARYSSKLQVK 286 (286)
Q Consensus 274 ~g~~~~~~~L~V~ 286 (286)
.|....++.|.|+
T Consensus 299 ~G~~~~~~~l~i~ 311 (312)
T 2y23_A 299 RGKDKSRLKLVDE 311 (312)
T ss_dssp TCCEEEEEEECSC
T ss_pred CCceeeeeEEEec
Confidence 9999999999874
No 27
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=3e-31 Score=226.06 Aligned_cols=228 Identities=27% Similarity=0.464 Sum_probs=100.1
Q ss_pred ccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRA 86 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~ 86 (286)
.+.++.+.+|++++|.|.+.+. |.+.+.|+|||..+..+.++.+. + ..|.|.+++.+|+|.|+|.|.|.
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~------~---~~L~i~~v~~~D~G~Y~C~a~n~- 83 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG------P---QRLQVLNASHEDSGAYSCRQRLT- 83 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec------c---ceEEEeecccccCEEEEEEEEeC-
Confidence 4778899999999999999987 67899999999998776665431 1 24889999999999999999887
Q ss_pred EEEE------E---------------------------------------------------ecCCCCCeeEEEeeCCcc
Q psy15667 87 GTCE------I---------------------------------------------------TPYDSGPYLIAWFKDGRQ 109 (286)
Q Consensus 87 g~~~------~---------------------------------------------------~~~~~~~~~~~W~~~g~~ 109 (286)
|... + ...+.+++.+.|+|+|..
T Consensus 84 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~ 163 (334)
T 1ry7_B 84 QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGRE 163 (334)
T ss_dssp -----------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBC
T ss_pred CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEE
Confidence 4211 0 000123457999999988
Q ss_pred CcCC---------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC----ceec--CCceEEecCCCEEE
Q psy15667 110 IPGR---------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLP----YVRL--IPKVTAIDGEGLSI 174 (286)
Q Consensus 110 l~~~---------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~----~~~~--~~~~~~~~g~~~~l 174 (286)
+... .....|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...+ .+.. .....+..|+.+.|
T Consensus 164 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l 242 (334)
T 1ry7_B 164 FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI-RQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEF 242 (334)
T ss_dssp CCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEE-EEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEE
T ss_pred CcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCE-EEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEE
Confidence 7532 124579999999999999999999998865 446677775421 1111 12234444555555
Q ss_pred EeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe----CCeeCCCCCCce--eeec--
Q psy15667 175 KCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK----DGKPLSPRFPVN--VSDL-- 246 (286)
Q Consensus 175 ~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~----~g~~~~~~~~~~--~~~~-- 246 (286)
.|.+. |.|.+.+.|+| +|..+....... +...
T Consensus 243 ~C~~~----------------------------------------g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~ 282 (334)
T 1ry7_B 243 HCKVY----------------------------------------SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAG 282 (334)
T ss_dssp CCCCB----------------------------------------CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSS
T ss_pred EEEEe----------------------------------------cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCc
Confidence 55444 45555666666 455443322111 1100
Q ss_pred ----CCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 247 ----DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 247 ----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
......|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 283 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 283 ANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326 (334)
T ss_dssp CSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEE
T ss_pred cccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEE
Confidence 1112479999999999999999999999999999999873
No 28
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=1.8e-31 Score=228.82 Aligned_cols=233 Identities=17% Similarity=0.277 Sum_probs=135.6
Q ss_pred cccccccCCCcEEEEEEeecCCC-----------CeeEEeeCCEE------cC---CCCeeEeceEEecccceeEEEEEc
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPT-----------PDIGWTLDGFE------LP---TNNRFVIGQFVSGHGDVISHVNIS 68 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~-----------p~v~W~~~~~~------l~---~~~~~~~~~~~~~~~~~~~~l~I~ 68 (286)
..++.+.+|+.++|.|.+.+.|. +.+.|+|++.. +. ...++.. .+. .|.|.
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~------~~~---~L~i~ 84 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISK------EKD---VLWFR 84 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEE------ETT---EEEES
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEee------cCC---EEEEc
Confidence 45667999999999999998665 99999998842 21 1122211 122 48899
Q ss_pred ccccCCCeEEEEEEEcCCEEEE----Ee-----------------------------c-------CCCCCeeEEEeeCCc
Q psy15667 69 HVTVEDGGEYACVAENRAGTCE----IT-----------------------------P-------YDSGPYLIAWFKDGR 108 (286)
Q Consensus 69 ~~~~~D~G~Y~C~a~n~~g~~~----~~-----------------------------~-------~~~~~~~~~W~~~g~ 108 (286)
+++.+|+|.|+|.|.|..+... +. . .+.+++.+.|+|||.
T Consensus 85 ~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~ 164 (349)
T 4dep_C 85 PTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCY 164 (349)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTE
T ss_pred cCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCE
Confidence 9999999999999999876432 10 0 112356899999999
Q ss_pred cCcCCC----CcceEEEccCCCCCCeeEEEEEEcCC-cce--eeeeeEEEEcCC------CceecCCceEEecCCCEEEE
Q psy15667 109 QIPGRT----SSTSLVINPVGREDRGIYQCIARRSD-GDV--AQGSAELQLGGL------PYVRLIPKVTAIDGEGLSIK 175 (286)
Q Consensus 109 ~l~~~~----~~~~l~i~~v~~~d~G~Y~C~a~~~~-g~~--~~~~~~l~v~~~------~~~~~~~~~~~~~g~~~~l~ 175 (286)
.+..+. ....|.|.++..+|+|.|+|.|.|.. |.. ......|.|... |.+.......
T Consensus 165 ~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~---------- 234 (349)
T 4dep_C 165 KIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHV---------- 234 (349)
T ss_dssp ECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------
T ss_pred ECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCce----------
Confidence 886532 23569999999999999999999976 432 133455555432 2221111100
Q ss_pred eeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeec---CCCCCeEEEEeCCeeCCC-CCCceeee-----c
Q psy15667 176 CPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTH---GDPPLTIRWLKDGKPLSP-RFPVNVSD-----L 246 (286)
Q Consensus 176 c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~---~~p~~~~~W~~~g~~~~~-~~~~~~~~-----~ 246 (286)
...+.+|+.+.|.|.+.. |.|.+.+.|+|+|..+.. ..++.+.. .
T Consensus 235 --------------------------~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~ 288 (349)
T 4dep_C 235 --------------------------VYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSR 288 (349)
T ss_dssp ------------------------------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCT
T ss_pred --------------------------eEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeec
Confidence 002445666666666554 467889999999988755 22222211 0
Q ss_pred -C--CCeeeEEEcccCCCCC-eEEEEEEEecccceeeEEEEEEC
Q psy15667 247 -D--SFSSLLSINSVSAAHS-GEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 247 -~--~~~~~L~i~~v~~~d~-G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
. .....|.|.++..+|+ |.|+|.|.|..|....++.|.|+
T Consensus 289 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 332 (349)
T 4dep_C 289 TEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332 (349)
T ss_dssp TCCEEEEECC-------------CEEEEECSSCEEEEECC----
T ss_pred CCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeee
Confidence 0 0134599999999999 99999999999999999888764
No 29
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=4.3e-31 Score=223.30 Aligned_cols=231 Identities=21% Similarity=0.287 Sum_probs=159.9
Q ss_pred cccccccCCCcEEEEEEeecCC-CCeeEEeeCCEEcC----CCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNP-TPDIGWTLDGFELP----TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p-~p~v~W~~~~~~l~----~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
.....+.+|+++.|.|.+.+.| .+.+.|+|++..+. .+.++.. .++ .|.|.+++.+|+|.|+|.|.
T Consensus 12 ~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~------~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (315)
T 1itb_B 12 KIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQ------HKE---KLWFVPAKVEDSGHYYCVVR 82 (315)
T ss_dssp CCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEE------CSS---BEECTTCCGGGCSCCEECCC
T ss_pred ceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEec------cCC---eEEECCCChhhCEEEEEEEe
Confidence 3456789999999999999987 88999999986542 2334322 122 48899999999999999999
Q ss_pred cCCEEEEE---------------------------------ec--------CCCCCeeEEEeeCCccCcCC-----CCcc
Q psy15667 84 NRAGTCEI---------------------------------TP--------YDSGPYLIAWFKDGRQIPGR-----TSST 117 (286)
Q Consensus 84 n~~g~~~~---------------------------------~~--------~~~~~~~~~W~~~g~~l~~~-----~~~~ 117 (286)
|..|.... .. .+.+++.+.|+|||..+... ....
T Consensus 83 n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~ 162 (315)
T 1itb_B 83 NSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD 162 (315)
T ss_dssp SSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETT
T ss_pred CCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCc
Confidence 87653211 11 11234679999999988532 1246
Q ss_pred eEEEccCCCCCCeeEEEEEE-cCCcceeeeeeEEE--Ec-----CCCceecCCceEEecCCCEEEEeeEeeecCCeEEEE
Q psy15667 118 SLVINPVGREDRGIYQCIAR-RSDGDVAQGSAELQ--LG-----GLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWE 189 (286)
Q Consensus 118 ~l~i~~v~~~d~G~Y~C~a~-~~~g~~~~~~~~l~--v~-----~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~ 189 (286)
.|.|.++..+|+|.|+|.+. |..|........+. +. ..|.+...+..
T Consensus 163 ~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~------------------------- 217 (315)
T 1itb_B 163 RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANE------------------------- 217 (315)
T ss_dssp EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSE-------------------------
T ss_pred eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCC-------------------------
Confidence 89999999999999999999 77776532222222 21 11211111110
Q ss_pred EcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeee----cC-------CCeeeEEEccc
Q psy15667 190 KVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD----LD-------SFSSLLSINSV 258 (286)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~----~~-------~~~~~L~i~~v 258 (286)
...+.+|+.+.|.|.+. |.|.|.+.|+|+|..+.......... .. .....|.|.++
T Consensus 218 ------------~~~~~~g~~v~l~C~~~-g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 284 (315)
T 1itb_B 218 ------------TMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEI 284 (315)
T ss_dssp ------------EEECCSSSCEEEEEEEE-ECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSC
T ss_pred ------------cEEEeCCCcEEEEEEEe-cCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeec
Confidence 01255667777777664 56777888899888886544321111 00 11348999999
Q ss_pred CCCC-CeEEEEEEEecccceeeEEEEEEC
Q psy15667 259 SAAH-SGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 259 ~~~d-~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
..+| +|.|+|.|.|..|....++.|.|+
T Consensus 285 ~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 285 ESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 9999 999999999999999999999875
No 30
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=2.3e-30 Score=216.40 Aligned_cols=230 Identities=20% Similarity=0.296 Sum_probs=159.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.+ .+.|++++..+ ... ...+ ..|.|.+++.+|+|.|+|.
T Consensus 12 ~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~~~-----~~~~---~~L~i~~~~~~d~G~Y~C~ 75 (290)
T 2o26_X 12 PPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----EMV-----ENKK---NEWIQEKAEATRTGTYTCS 75 (290)
T ss_dssp CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----CEE-----EECS---SEEEETTCCGGGCEEEEEE
T ss_pred CCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----eee-----cCCC---ceEEEeccCHHhCeEEEEE
Confidence 788998888889999999999999988 89999998876 111 1122 2589999999999999999
Q ss_pred EEcCCE-EEEEe----c----------------------CCCCC-eeEEE-eeCCccCcCCC-----CcceEEEccCCCC
Q psy15667 82 AENRAG-TCEIT----P----------------------YDSGP-YLIAW-FKDGRQIPGRT-----SSTSLVINPVGRE 127 (286)
Q Consensus 82 a~n~~g-~~~~~----~----------------------~~~~~-~~~~W-~~~g~~l~~~~-----~~~~l~i~~v~~~ 127 (286)
|.|... .+.+. + ...++ +.+.| ++||..+.... ....|.|.++..+
T Consensus 76 ~~ng~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~ 155 (290)
T 2o26_X 76 NSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRA 155 (290)
T ss_dssp ESSSCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGG
T ss_pred eeCCccEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHH
Confidence 988211 11110 0 01234 78999 57888875421 2368999999999
Q ss_pred CCe-eEEEEEEcCCcceeeeeeEEEEc----CCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccccccccc
Q psy15667 128 DRG-IYQCIARRSDGDVAQGSAELQLG----GLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPF 202 (286)
Q Consensus 128 d~G-~Y~C~a~~~~g~~~~~~~~l~v~----~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~ 202 (286)
|+| .|+|.|.|..+...+..+.|.|. .+|.+...+ ..
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~--------------------------------------~~ 197 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPE--------------------------------------TS 197 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSC--------------------------------------SB
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCC--------------------------------------Cc
Confidence 999 99999999866543334666664 222222111 11
Q ss_pred CCCCCCCeEEEEEeeecCCCCCe-EEEEeCCee----CCCCCCceeee--cCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLT-IRWLKDGKP----LSPRFPVNVSD--LDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~-~~W~~~g~~----~~~~~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
..+.+|+.+.|.|.+. |.|.+. +.|+|+|.. +.......+.. .......|.|.++..+|+|.|+|.|.|..|
T Consensus 198 ~~v~~G~~v~l~C~~~-g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g 276 (290)
T 2o26_X 198 HLLKKGDTFTVVCTIK-DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFG 276 (290)
T ss_dssp CCCCTTCCEEEEEEEE-ESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSC
T ss_pred ceEecCCcEEEEEEEe-cCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCC
Confidence 2355666777777665 555554 888888776 22222111111 012256899999999999999999999999
Q ss_pred ceeeEEEEEEC
Q psy15667 276 QARYSSKLQVK 286 (286)
Q Consensus 276 ~~~~~~~L~V~ 286 (286)
....++.|.|+
T Consensus 277 ~~~~~~~l~V~ 287 (290)
T 2o26_X 277 SANVTTTLKVV 287 (290)
T ss_dssp EEEEEEEECC-
T ss_pred cEEEEEEEEEE
Confidence 99999988774
No 31
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.97 E-value=2.9e-30 Score=218.29 Aligned_cols=235 Identities=17% Similarity=0.235 Sum_probs=154.0
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCC-----eeEEeeCCEEc-------------CCCCeeEeceEEecccceeEEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTP-----DIGWTLDGFEL-------------PTNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p-----~v~W~~~~~~l-------------~~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
+...|.++++..|++++|.|.+.+.|.+ +|.|+|++... ....++..............+|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4567788899999999999999987766 48999987532 12222221000000000112489
Q ss_pred EcccccCCCeEEEEEEEcC-CEEEE----Eec----------------------------CCCCCeeEEEeeCCccCcCC
Q psy15667 67 ISHVTVEDGGEYACVAENR-AGTCE----ITP----------------------------YDSGPYLIAWFKDGRQIPGR 113 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~-~g~~~----~~~----------------------------~~~~~~~~~W~~~g~~l~~~ 113 (286)
|.+++.+|+|.|+|.+.+. .+... +.. ...+++.+.|++++..+...
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~ 162 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNT 162 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccc
Confidence 9999999999999998643 33321 110 01234689999998876421
Q ss_pred -----C------CcceEEEccCCCCCCeeEEEEEEcCCccee-eeeeEEEEcCCCceec--CCceEEecCCCEEEEeeEe
Q psy15667 114 -----T------SSTSLVINPVGREDRGIYQCIARRSDGDVA-QGSAELQLGGLPYVRL--IPKVTAIDGEGLSIKCPVA 179 (286)
Q Consensus 114 -----~------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~-~~~~~l~v~~~~~~~~--~~~~~~~~g~~~~l~c~~~ 179 (286)
. ....|.|.++..+|+|.|+|.|.|..+... .....|.|..+|.+.. .+...
T Consensus 163 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~-------------- 228 (313)
T 4fqp_A 163 SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNW-------------- 228 (313)
T ss_dssp EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCE--------------
T ss_pred ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCcccccccccee--------------
Confidence 0 123588899999999999999999766532 2234555544443221 11122
Q ss_pred eecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecCCCeeeEEEccc
Q psy15667 180 GYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV 258 (286)
Q Consensus 180 ~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v 258 (286)
+.+|+.+.|.|.+. |.|.| .+.|+|+|..+.... ... +..|.|.++
T Consensus 229 -------------------------~~~g~~v~l~C~~~-g~P~p~~v~W~~~~~~l~~~~---~~~----~~~L~i~~v 275 (313)
T 4fqp_A 229 -------------------------YLGQNEATLTCDAR-SNPEPTGYNWSTTMGPLPPFA---VAQ----GAQLLIRPV 275 (313)
T ss_dssp -------------------------ETTCCCEEEEEEEE-EESCCCEEEEEETTBSCCTTE---EEE----TTEEEECCC
T ss_pred -------------------------ecCCCeEEEEEEec-CCCCCcEEEEEECCEECCCce---EEe----CCEEEECcC
Confidence 23455556666553 44555 688999998775431 111 357999999
Q ss_pred CCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 259 SAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 259 ~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
..+|+|.|+|.|.|.+|....++.|.|+
T Consensus 276 ~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 276 DKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp SSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 9999999999999999999999999874
No 32
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=3.6e-30 Score=228.19 Aligned_cols=256 Identities=16% Similarity=0.225 Sum_probs=174.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCC---eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTP---DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p---~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
..+...+.+..+.+|++++|.|.+.|.|++ .|+|+|||..|..+.... ......|.|.++..+|+|.|+
T Consensus 87 ~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~--------~~~~~~L~i~~~~~~d~G~Y~ 158 (450)
T 1z7z_I 87 ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG--------EPAEVTTTVLVRRDHHGANFS 158 (450)
T ss_dssp SEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCT--------TTEEEEEEEECCSSCSSCEEE
T ss_pred CcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccc--------cccceEEEEEeeccccCceEE
Confidence 334456666889999999999999999888 999999999885432211 111235899999999999999
Q ss_pred EEEEcCCEE------------EE--Ee--------------------------cCCC-C--CeeEEEeeCCccCcCCCC-
Q psy15667 80 CVAENRAGT------------CE--IT--------------------------PYDS-G--PYLIAWFKDGRQIPGRTS- 115 (286)
Q Consensus 80 C~a~n~~g~------------~~--~~--------------------------~~~~-~--~~~~~W~~~g~~l~~~~~- 115 (286)
|.|.|..|. .. +. ..+. + .+.+.|+++|..+..+..
T Consensus 159 C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~~~~ 238 (450)
T 1z7z_I 159 CRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTY 238 (450)
T ss_dssp EEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCEEEE
T ss_pred EEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCceEEe
Confidence 999987441 00 00 0011 2 468999999988765211
Q ss_pred -cceEE---EccCCCCCCe--eEEEEEEcCCcceeeeeeEEEEcC--CCceecCCceEEecCCCEEEEeeEeeecCCeEE
Q psy15667 116 -STSLV---INPVGREDRG--IYQCIARRSDGDVAQGSAELQLGG--LPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVH 187 (286)
Q Consensus 116 -~~~l~---i~~v~~~d~G--~Y~C~a~~~~g~~~~~~~~l~v~~--~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~ 187 (286)
...+. +.++..+|+| .|+|.+.|..|.. ...+.|.|.. .|.+... ...+.+|+.+.|.|.+. |.|.+.
T Consensus 239 ~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~-~~~~~l~V~~~~~p~i~~~-~~~v~~G~~v~l~C~~~--p~p~i~ 314 (450)
T 1z7z_I 239 GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ-ETLQTVTIYSFPAPNVILT-KPEVSEGTEVTVKCEAH--PRAKVT 314 (450)
T ss_dssp ETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEE-EEEEEEEEECCCCCEEEES-CSEEETTCEEEEEEEC---------
T ss_pred cCCceeEEEEEEeEhhhCCcEEEEEEEccCCccE-EEEEEEEEecCCCCeEecC-CeeEeCCCcEEEEEecC--CCCEeE
Confidence 11222 2277999999 9999999998865 3467787765 3444333 45788999999999998 888999
Q ss_pred EEEcCCc--------c--cc----------c---------------------------c---c-ccCCCCCCCeEEEEEe
Q psy15667 188 WEKVPPK--------I--ES----------F---------------------------A---F-PFDGLPEGARTRVICG 216 (286)
Q Consensus 188 w~~~~~~--------~--~~----------~---------------------------~---~-~~~~~~~g~~~~l~c~ 216 (286)
| ...+. + .. + . . ....+.+|+.+.|.|.
T Consensus 315 W-~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~ 393 (450)
T 1z7z_I 315 L-NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQ 393 (450)
T ss_dssp ----------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCC
T ss_pred E-CCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEe
Confidence 9 31110 0 00 0 0 0 0113567999999998
Q ss_pred eecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 217 VTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 217 ~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
+ .|.|.|.+.|+|+|..+... +..+ .+..+|+|.|+|.|.|.+|....++.|.|+
T Consensus 394 ~-~g~P~p~i~W~~~g~~~~~~-----------g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 394 A-WGNPLPELKCLKDGTFPLPI-----------GESV---TVTRDLEGTYLCRARSTQGEVTREVTVNVL 448 (450)
T ss_dssp C-EEESCCEEEEEETTTEECCT-----------TSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred c-ccCCCCcEEEEECCcccCCC-----------CCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEEE
Confidence 8 48899999999999743221 1222 688899999999999999999999999884
No 33
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=1.8e-29 Score=210.61 Aligned_cols=233 Identities=20% Similarity=0.311 Sum_probs=157.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|++++|.|.+.+ .+.|++++.... .... . ... ..|.|.+++.+|+|.|+|.
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~---~~~~----~-~~~--~~L~i~~~~~~d~G~Y~C~ 69 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYW---TLDP----E-SPG--STLTTRNATFKNTGTYRCT 69 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSS---EECC----C-SSC--CEEEESSCCGGGCEEEEEE
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceE---EEec----c-CCc--cEEEEeeeccccCEEEEEE
Confidence 788888888889999999999999987 499998764321 1110 0 111 3589999999999999999
Q ss_pred EEcCCEEE----EEec----------------------------CCCCCe-eEEEee-CCccCcCCC-----CcceEEEc
Q psy15667 82 AENRAGTC----EITP----------------------------YDSGPY-LIAWFK-DGRQIPGRT-----SSTSLVIN 122 (286)
Q Consensus 82 a~n~~g~~----~~~~----------------------------~~~~~~-~~~W~~-~g~~l~~~~-----~~~~l~i~ 122 (286)
|.|..+.. .+.. ...+++ .+.|++ ++..+.... ....|.|.
T Consensus 70 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~ 149 (289)
T 3ejj_X 70 ELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIR 149 (289)
T ss_dssp CCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEES
T ss_pred EeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEe
Confidence 98766531 1110 001122 399986 666664321 24679999
Q ss_pred cCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC----CCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccccc
Q psy15667 123 PVGREDRGIYQCIARRSDGDVAQGSAELQLGG----LPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESF 198 (286)
Q Consensus 123 ~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~----~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~ 198 (286)
++..+|+|.|+|.+.+.........+.|.|.. .|.+...+.
T Consensus 150 ~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~----------------------------------- 194 (289)
T 3ejj_X 150 KAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPS----------------------------------- 194 (289)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESS-----------------------------------
T ss_pred ecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCC-----------------------------------
Confidence 99999999999999954333334456666652 222111110
Q ss_pred ccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeec-CCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 199 AFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 199 ~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
...+.+|+.+.|.|.+..+.|.+.+.|++++..+........... ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 195 ---~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 271 (289)
T 3ejj_X 195 ---KLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR 271 (289)
T ss_dssp ---SEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred ---ceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCc
Confidence 112456777777777765578889999999988764322111110 0125689999999999999999999999999
Q ss_pred eeEEEEEEC
Q psy15667 278 RYSSKLQVK 286 (286)
Q Consensus 278 ~~~~~L~V~ 286 (286)
..++.|.+.
T Consensus 272 ~~s~~L~~~ 280 (289)
T 3ejj_X 272 TATMNFQVV 280 (289)
T ss_dssp EEEEEEECC
T ss_pred cccEEEEEE
Confidence 999999863
No 34
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.97 E-value=3.5e-30 Score=222.26 Aligned_cols=231 Identities=15% Similarity=0.169 Sum_probs=155.7
Q ss_pred ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcC--------------CCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 12 QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELP--------------TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~--------------~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+.+.+|++++|.|.+.+.|.+.+.|+|++..+. ...|+.+.......+ ...|.|.+++.+|+|.
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG--NFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTT--CCCEEECSCCGGGCEE
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCC--eEEEEECCCCHHHCEE
Confidence 467899999999999999999999999985421 112221100000011 1248999999999999
Q ss_pred EEEEEEcCCEEEEEe-----------------------cCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEE
Q psy15667 78 YACVAENRAGTCEIT-----------------------PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQC 134 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~-----------------------~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C 134 (286)
|+|.|.|..+.+.+. ....+++.+.|+++|..+.. ....|.|.++..+|+|.|+|
T Consensus 82 Y~C~~~n~~~~~~l~V~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C 159 (363)
T 1wio_A 82 YICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ--GGKTLSVSQLELQDSGTWTC 159 (363)
T ss_dssp EEEEETTEEEEEEEEEEEEEESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE--ESSEEEECSBCGGGCEECEE
T ss_pred EEEEEEECCCcEEEEEEeCCCCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc--cceEEEEeeCChhcCCEEEE
Confidence 999999887654432 11234568999999876532 34689999999999999999
Q ss_pred EEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEE
Q psy15667 135 IARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVI 214 (286)
Q Consensus 135 ~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~ 214 (286)
.+.|..+.. ...+.+.|...|... ....+.+|+.+.|.|.+.+.+.
T Consensus 160 ~a~~~~~~~-~~~~~l~v~~~p~~~--~~~~~~~G~~v~l~C~~~~~~~------------------------------- 205 (363)
T 1wio_A 160 TVLQNQKKV-EFKIDIVVLAFQKAS--SIVYKKEGEQVEFSFPLAFTVE------------------------------- 205 (363)
T ss_dssp EEEETTEEE-EECCEECEECCSCSE--EEEEEETBCCEEEECCCCCCCC-------------------------------
T ss_pred EEecCCCeE-EEEEEEEEecCCCCC--CceEEecCCEEEEEEEEecccc-------------------------------
Confidence 999875543 334556555444322 2234556666666666554110
Q ss_pred EeeecC-CCCCeEEEEeCCeeCCC--------CCCceeee---------cCCCeeeEEEcccCCCCCeEEEEEEEec--c
Q psy15667 215 CGVTHG-DPPLTIRWLKDGKPLSP--------RFPVNVSD---------LDSFSSLLSINSVSAAHSGEYTCVASNT--A 274 (286)
Q Consensus 215 c~~~~~-~p~~~~~W~~~g~~~~~--------~~~~~~~~---------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~--~ 274 (286)
+ .|.+.+.|+|+|..+.. ..++.+.. .......|.|.++..+|+|.|+|.|.|. .
T Consensus 206 -----~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 280 (363)
T 1wio_A 206 -----KLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKT 280 (363)
T ss_dssp -----SSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTT
T ss_pred -----cCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhc
Confidence 1 34556666666665544 22222211 0112348999999999999999999999 9
Q ss_pred cceeeEEEEEE
Q psy15667 275 AQARYSSKLQV 285 (286)
Q Consensus 275 g~~~~~~~L~V 285 (286)
|....++.|.|
T Consensus 281 g~~~~~~~l~V 291 (363)
T 1wio_A 281 GKLHQEVNLVV 291 (363)
T ss_dssp CCEEEEEEEEE
T ss_pred CeEEEEEeEEE
Confidence 99999988887
No 35
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=222.72 Aligned_cols=242 Identities=19% Similarity=0.329 Sum_probs=167.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEee-------cCCCCeeEEeeCCEEc--CCC--CeeEeceEEecccceeEEEEEccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIAS-------GNPTPDIGWTLDGFEL--PTN--NRFVIGQFVSGHGDVISHVNISHV 70 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~-------g~p~p~v~W~~~~~~l--~~~--~~~~~~~~~~~~~~~~~~l~I~~~ 70 (286)
.|.|...+.++.+.+|++++|.|.+. +.|.+.+.|++++..+ ... .++.. .++ .|.|.++
T Consensus 18 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~------~~~---~L~i~~v 88 (339)
T 3o4o_C 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWA------QDG---ALWLLPA 88 (339)
T ss_dssp CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEE------ETT---EEEESSB
T ss_pred hHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEe------eCC---eEEECCC
Confidence 57888899999999999999999998 8999999999999874 332 22211 122 4889999
Q ss_pred ccCCCeEEEEEEEcCCEEEEE---------------------------------e-----cCCCCCeeEEEeeCCccCcC
Q psy15667 71 TVEDGGEYACVAENRAGTCEI---------------------------------T-----PYDSGPYLIAWFKDGRQIPG 112 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~---------------------------------~-----~~~~~~~~~~W~~~g~~l~~ 112 (286)
+.+|+|.|+|.|.|..|.... . ....+++.+.|+|||..+..
T Consensus 89 ~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~ 168 (339)
T 3o4o_C 89 LQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK 168 (339)
T ss_dssp CTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCT
T ss_pred CcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCC
Confidence 999999999999998764321 0 01123467999999998864
Q ss_pred CC-------CcceEEEccCCCCCCeeEEEEEEcCCcce---eeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeec
Q psy15667 113 RT-------SSTSLVINPVGREDRGIYQCIARRSDGDV---AQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYP 182 (286)
Q Consensus 113 ~~-------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~---~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p 182 (286)
.. ....|.|.++..+|+|.|+|.+.|..|.. ....+.|.|...+.. .
T Consensus 169 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~-----------------------~ 225 (339)
T 3o4o_C 169 DNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEE-----------------------T 225 (339)
T ss_dssp TCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCC-----------------------C
T ss_pred CCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCC-----------------------C
Confidence 31 22579999999999999999999987642 233456665432100 0
Q ss_pred CCeEEEEEcCCcccccccccCCCCCCCeEEEEEeee--cCCC-CCeEEEEeCCeeCCCCC---------CceeeecCC--
Q psy15667 183 IEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVT--HGDP-PLTIRWLKDGKPLSPRF---------PVNVSDLDS-- 248 (286)
Q Consensus 183 ~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~--~~~p-~~~~~W~~~g~~~~~~~---------~~~~~~~~~-- 248 (286)
.|.+ .. ......+.+|+.+.|.|.+. .|.| ++.+.|+++|..+.... +..+.....
T Consensus 226 ~P~i---------~~-~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 295 (339)
T 3o4o_C 226 IPVI---------IS-PLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY 295 (339)
T ss_dssp CCEE---------CC-CSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCE
T ss_pred CCEE---------ec-CCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceE
Confidence 0000 00 00123466788888888773 4566 78899999988764221 111111100
Q ss_pred CeeeEEEcccCCCCC-eEEEEEEEecccceeeEEEEEE
Q psy15667 249 FSSLLSINSVSAAHS-GEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 249 ~~~~L~i~~v~~~d~-G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
....|.|.++..+|+ |.|+|.|.|.+|.....+.|.+
T Consensus 296 ~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 296 IEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp EEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred EEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 012799999999997 9999999999999998887754
No 36
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=1.4e-28 Score=222.19 Aligned_cols=272 Identities=15% Similarity=0.203 Sum_probs=177.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC--eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP--DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p--~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+....+.+|+.++|.|.+.|.|++ .|+|+|||..|..+.++.... ....+. ....|.|.++..+|+|.
T Consensus 114 ~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~-~~~~~~~~~~s~L~i~~~~~~d~G~ 192 (523)
T 2rcj_C 114 NPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPS-KQSNNKYAASSYLSLTPEQWKSHRS 192 (523)
T ss_pred CCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEecccc-ccCCCCEEEEEEEEEechhcCCCce
Confidence 6777777777778899999999999998764 999999999886543322100 011111 12358999999999999
Q ss_pred EEEEEEcCCEEEEE----------------e-------------------cCCC-CCe-eEEEeeCCccCcCC------C
Q psy15667 78 YACVAENRAGTCEI----------------T-------------------PYDS-GPY-LIAWFKDGRQIPGR------T 114 (286)
Q Consensus 78 Y~C~a~n~~g~~~~----------------~-------------------~~~~-~~~-~~~W~~~g~~l~~~------~ 114 (286)
|+|.|.|..|.... . ..+. +++ .++|+|||..+... .
T Consensus 193 Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~ 272 (523)
T 2rcj_C 193 YSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQ 272 (523)
T ss_pred EEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEec
Confidence 99999997663210 0 0011 224 79999999875321 0
Q ss_pred C------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC-Cc-eE-EecCCCEEEEeeEeeecC--
Q psy15667 115 S------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI-PK-VT-AIDGEGLSIKCPVAGYPI-- 183 (286)
Q Consensus 115 ~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~-~~-~~-~~~g~~~~l~c~~~~~p~-- 183 (286)
. ...|.|.++..+| |.|+|.|.|..|.. .....|.+...|.+... +. .. +.+|+.+.|.|.+.|.|+
T Consensus 273 ~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~-~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~ 350 (523)
T 2rcj_C 273 SSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT-KVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHED 350 (523)
T ss_pred CCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc-ceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCC
Confidence 1 2379999999999 99999999998875 23455555545554332 22 22 678999999999999654
Q ss_pred --CeEEEEEcCCcccc----------------------------------c---------------c-------cc----
Q psy15667 184 --EEVHWEKVPPKIES----------------------------------F---------------A-------FP---- 201 (286)
Q Consensus 184 --~~v~w~~~~~~~~~----------------------------------~---------------~-------~~---- 201 (286)
+.|.|.+....+.. | . .+
T Consensus 351 ~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~ 430 (523)
T 2rcj_C 351 PQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYT 430 (523)
T ss_pred CceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEE
Confidence 48999984211100 0 0 00
Q ss_pred ---cCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCceeeec-CC---CeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 202 ---FDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVSDL-DS---FSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 202 ---~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~~~-~~---~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
......|+.+.|.|.+....|+ ..+.|+|+|..+.......+... ++ ....|.|.....+|+|.|+|.|.|.
T Consensus 431 ~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~ 510 (523)
T 2rcj_C 431 LPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE 510 (523)
T ss_pred eCCChHHccCCceEEEEEEEeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcC
Confidence 0000124459999998754433 49999999998864322222111 11 1234556666668899999999998
Q ss_pred ccc
Q psy15667 274 AAQ 276 (286)
Q Consensus 274 ~g~ 276 (286)
...
T Consensus 511 ~l~ 513 (523)
T 2rcj_C 511 ALH 513 (523)
T ss_pred CcC
Confidence 643
No 37
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=1.3e-29 Score=215.47 Aligned_cols=237 Identities=17% Similarity=0.268 Sum_probs=140.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcC---------CCCeeEeceEEecccceeEEEEEccccc
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELP---------TNNRFVIGQFVSGHGDVISHVNISHVTV 72 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~---------~~~~~~~~~~~~~~~~~~~~l~I~~~~~ 72 (286)
..|...+.++.+.+|++++|.|.+.+. |.+.|.|+|++.++. ...|+...............|.|.+++.
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 83 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITP 83 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCG
T ss_pred eEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCcc
Confidence 456677788899999999999999997 989999999975421 1113321100000001123599999999
Q ss_pred CCCeEEEEEEEcCCEE-----------EEEe--c------------------------CCCCCe--eEEEeeCCccCcCC
Q psy15667 73 EDGGEYACVAENRAGT-----------CEIT--P------------------------YDSGPY--LIAWFKDGRQIPGR 113 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g~-----------~~~~--~------------------------~~~~~~--~~~W~~~g~~l~~~ 113 (286)
+|+|.|+|.|.|..+. ..+. + .+.+++ .+.|+|||..+...
T Consensus 84 ~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~ 163 (327)
T 2wng_A 84 ADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 163 (327)
T ss_dssp GGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred ccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc
Confidence 9999999999987431 1110 0 001122 79999999988532
Q ss_pred C-------C------cceEEEccCCCCCCeeEEEEEEcCCcce--eeeeeEEE--EcCCCceecCCceEEecCCCEEEEe
Q psy15667 114 T-------S------STSLVINPVGREDRGIYQCIARRSDGDV--AQGSAELQ--LGGLPYVRLIPKVTAIDGEGLSIKC 176 (286)
Q Consensus 114 ~-------~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~--~~~~~~l~--v~~~~~~~~~~~~~~~~g~~~~l~c 176 (286)
. . ...|.|.....+|+|.|+|.+.|..+.. ......+. +..+|.+...+
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~-------------- 229 (327)
T 2wng_A 164 QTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQ-------------- 229 (327)
T ss_dssp EEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEE--------------
T ss_pred ccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEec--------------
Confidence 1 1 1346677777777899999999987652 11223332 12222211110
Q ss_pred eEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecCC----Cee
Q psy15667 177 PVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDS----FSS 251 (286)
Q Consensus 177 ~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~----~~~ 251 (286)
..+.+|+.+.|.|.+....|++ .+.|+|+|..+.......+..... ...
T Consensus 230 --------------------------~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~ 283 (327)
T 2wng_A 230 --------------------------QPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMS 283 (327)
T ss_dssp --------------------------ECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEE
T ss_pred --------------------------CCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEE
Confidence 0145666677777665333443 789999998774321111111111 124
Q ss_pred eEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 252 LLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 252 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
.|.|..+..+|+|.|+|.|.|.+|....
T Consensus 284 ~L~i~~~~~~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 284 WLLVNVSAHRDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp EEEC-------CCEEEEEEEETTCCCEE
T ss_pred EEEEccccccCCCEEEEEEEeCCCCCch
Confidence 6889999999999999999999986533
No 38
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=217.87 Aligned_cols=228 Identities=18% Similarity=0.259 Sum_probs=148.2
Q ss_pred cccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcC-----------------CCCeeEeceEEecccceeEEEEEccc
Q psy15667 9 FIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELP-----------------TNNRFVIGQFVSGHGDVISHVNISHV 70 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~-----------------~~~~~~~~~~~~~~~~~~~~l~I~~~ 70 (286)
++++++.+|++++|.|.+.+. |.+.|+|+|++.... ...|+..... ..+ ..+|.|.++
T Consensus 6 ~p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~--~~sL~I~~v 81 (308)
T 4fom_A 6 EPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNY--SLN--DATITLHNI 81 (308)
T ss_dssp CCSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCC--SSS--BCCEEECSC
T ss_pred CCEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeecc--CCC--ceEEEEccC
Confidence 457889999999999998754 556799998653211 0112211110 011 124899999
Q ss_pred ccCCCeEEEEEEEcC-CEEEEE----e------------------------------cCCCCCeeEEEeeCCccCcCCC-
Q psy15667 71 TVEDGGEYACVAENR-AGTCEI----T------------------------------PYDSGPYLIAWFKDGRQIPGRT- 114 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~-~g~~~~----~------------------------------~~~~~~~~~~W~~~g~~l~~~~- 114 (286)
+.+|+|.|+|.|.|. .|.... . ..+.+++.+.|++++..+....
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~ 161 (308)
T 4fom_A 82 GFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTT 161 (308)
T ss_dssp CGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE
T ss_pred CHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccc
Confidence 999999999999875 333210 0 0012346899999998874311
Q ss_pred --------CcceEEEccCCCCCCeeEEEEEEcCCccee-eeeeEEEEcCCCceecC--CceEEecCCCEEEEeeEeeecC
Q psy15667 115 --------SSTSLVINPVGREDRGIYQCIARRSDGDVA-QGSAELQLGGLPYVRLI--PKVTAIDGEGLSIKCPVAGYPI 183 (286)
Q Consensus 115 --------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~-~~~~~l~v~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~p~ 183 (286)
....|.|.++..+|+|.|+|.|.|..+... ...+.|.|...|.+... ....+..|+.++|.|.+.|
T Consensus 162 ~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g--- 238 (308)
T 4fom_A 162 SFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADA--- 238 (308)
T ss_dssp ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEE---
T ss_pred eeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEec---
Confidence 124699999999999999999999876532 23445555444433221 1223333444444444443
Q ss_pred CeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCC
Q psy15667 184 EEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAH 262 (286)
Q Consensus 184 ~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 262 (286)
.|+| .+.|+|++..+..... ...+..|.|.+++.+|
T Consensus 239 -------------------------------------~P~p~~v~W~k~~~~~~~~~~------~~~~~~l~i~~v~~~d 275 (308)
T 4fom_A 239 -------------------------------------NPPPFKSVWSRLDGQWPDGLL------ASDNTLHFVHPLTFNY 275 (308)
T ss_dssp -------------------------------------ESCEEEEECCBSSSCCCSSCB------CSTTEEECCSCCCSCC
T ss_pred -------------------------------------CCCCcEEEEEECCeECCCcEE------EcCCeEEEECCCChhh
Confidence 3444 5778888876644311 1224567789999999
Q ss_pred CeEEEEEEEecccceeeEEEEEEC
Q psy15667 263 SGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 263 ~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
+|.|+|.|.|.+|..+.++.|.|+
T Consensus 276 ~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 276 SGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp CSEEEEEEEETTEEEEEEEECCEE
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999999999999999999888773
No 39
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=211.44 Aligned_cols=233 Identities=19% Similarity=0.290 Sum_probs=158.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++++.+|++++|.|.+.+. +.|++++.. ++... .. .....|.|.+++.+|+|.|+|.
T Consensus 4 ~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~----~~-~~~~~L~i~~~~~~d~G~Y~C~ 69 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLY----SD-GSSSILSTNNATFQNTGTYRCT 69 (292)
T ss_dssp CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEEC----CB-TTEEEEEESSCCGGGCSCEEEC
T ss_pred CceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEe----cc-CceEEEEEcccccccCEEEEEE
Confidence 8999999999999999999999999884 999976432 11111 11 1123699999999999999999
Q ss_pred EEcCCEEEE----Eec--------------------------C-CCCC--eeEEEeeC-CccCcCC-----CCcceEEEc
Q psy15667 82 AENRAGTCE----ITP--------------------------Y-DSGP--YLIAWFKD-GRQIPGR-----TSSTSLVIN 122 (286)
Q Consensus 82 a~n~~g~~~----~~~--------------------------~-~~~~--~~~~W~~~-g~~l~~~-----~~~~~l~i~ 122 (286)
|.|..|... +.. . ..+. +.+.|+++ +..+... .....|.|.
T Consensus 70 ~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~ 149 (292)
T 4dkd_C 70 EPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIH 149 (292)
T ss_dssp CCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEET
T ss_pred EccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCceEEEC
Confidence 998655321 000 0 0112 56999997 5555321 123559999
Q ss_pred cCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC----CCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccccc
Q psy15667 123 PVGREDRGIYQCIARRSDGDVAQGSAELQLGG----LPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESF 198 (286)
Q Consensus 123 ~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~----~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~ 198 (286)
++..+|+|.|+|.+.|..+...+..+.|.|.. +|.+...+.
T Consensus 150 ~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~----------------------------------- 194 (292)
T 4dkd_C 150 RAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA----------------------------------- 194 (292)
T ss_dssp TCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESS-----------------------------------
T ss_pred CCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCC-----------------------------------
Confidence 99999999999999988776544466777654 222211110
Q ss_pred ccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeec-CCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 199 AFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 199 ~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
...+.+|+.+.|.|.+...++++.+.|++++..+.......+... ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 195 ---~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 195 ---ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp ---CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ---ceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence 122356777777777764455577888888876644332221111 0123589999999999999999999999999
Q ss_pred eeEEEEEEC
Q psy15667 278 RYSSKLQVK 286 (286)
Q Consensus 278 ~~~~~L~V~ 286 (286)
..++.|.|+
T Consensus 272 ~~~~~l~V~ 280 (292)
T 4dkd_C 272 STSMFFRVV 280 (292)
T ss_dssp EEEEEECC-
T ss_pred eeEEEEEEe
Confidence 999998874
No 40
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.97 E-value=2.3e-29 Score=222.15 Aligned_cols=276 Identities=17% Similarity=0.212 Sum_probs=184.2
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCC----CeeEEeeCC--EEc------------CCCCeeEeceEEecccceeEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPT----PDIGWTLDG--FEL------------PTNNRFVIGQFVSGHGDVISHV 65 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~----p~v~W~~~~--~~l------------~~~~~~~~~~~~~~~~~~~~~l 65 (286)
.|...+.++++.+|++++|.|.+.+.|. +.+.|+|++ ..+ ....|+.... .+ ....|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~----~~-~~~~L 77 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG----SR-TDFTL 77 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE----ET-TEEEE
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc----cC-CcEEE
Confidence 4666788889999999999999998887 489999963 221 0123443321 11 12369
Q ss_pred EEcccccCCCeEEEEEEEcCCE-------EEEEe-----------c-----------------CC-CCCe-eEEEeeCCc
Q psy15667 66 NISHVTVEDGGEYACVAENRAG-------TCEIT-----------P-----------------YD-SGPY-LIAWFKDGR 108 (286)
Q Consensus 66 ~I~~~~~~D~G~Y~C~a~n~~g-------~~~~~-----------~-----------------~~-~~~~-~~~W~~~g~ 108 (286)
.|.+++.+|+|.|+|.|.|..+ ...+. + .+ .+++ .+.|+|||.
T Consensus 78 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 157 (438)
T 1qgc_4 78 TIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 157 (438)
T ss_dssp EESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred EeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCE
Confidence 9999999999999999998653 11111 0 00 1223 799999998
Q ss_pred cCcCC---------CC------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC-CceecCCceEEecCCCE
Q psy15667 109 QIPGR---------TS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL-PYVRLIPKVTAIDGEGL 172 (286)
Q Consensus 109 ~l~~~---------~~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~-~~~~~~~~~~~~~g~~~ 172 (286)
.+... .. ...|.|.++..+|+|.|+|.|.|..+.. .....+..... +.+...+...+.+|+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~G~~v 236 (438)
T 1qgc_4 158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS-PIVKSFNRNECEVMLVESGGGLVKPGGSL 236 (438)
T ss_dssp EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS-CEEEEEETTC-CCEEEEECCEEECTTCCE
T ss_pred EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCC-ceecccccccceeEEecCCceEEecCCcE
Confidence 77543 01 2479999999999999999999987753 11222222111 22333345678899999
Q ss_pred EEEeeEeeec--CCeEEEEEc--CCccc---------------------------------c---------------ccc
Q psy15667 173 SIKCPVAGYP--IEEVHWEKV--PPKIE---------------------------------S---------------FAF 200 (286)
Q Consensus 173 ~l~c~~~~~p--~~~v~w~~~--~~~~~---------------------------------~---------------~~~ 200 (286)
.|.|.+.+.| .+.+.|.+. ...+. . |..
T Consensus 237 ~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 316 (438)
T 1qgc_4 237 KLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVR 316 (438)
T ss_dssp EEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEE
T ss_pred EEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEE
Confidence 9999999988 678999873 10000 0 000
Q ss_pred c----------------------------------cCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeee
Q psy15667 201 P----------------------------------FDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSD 245 (286)
Q Consensus 201 ~----------------------------------~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~ 245 (286)
. ...+.+|+.+.|.|.+....|.+ .+.|+|+|..+.......+..
T Consensus 317 ~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~ 396 (438)
T 1qgc_4 317 REDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ 396 (438)
T ss_dssp CCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEE
T ss_pred EccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCcccc
Confidence 0 11245799999999987443766 999999998764211111111
Q ss_pred cC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 246 LD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 246 ~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+ .....|.|.++..+| |.|+|.|.|.+|.......|.+|
T Consensus 397 ~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~~k 438 (438)
T 1qgc_4 397 SDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 438 (438)
T ss_dssp TTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecCCC
Confidence 11 113468999999999 99999999999988777766543
No 41
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=6.3e-29 Score=224.40 Aligned_cols=239 Identities=18% Similarity=0.253 Sum_probs=147.9
Q ss_pred ccccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecc-cceeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 8 SFIEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGH-GDVISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~-~~~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.+.+..+.+|+.++|.|.+. |.|.|.++|++++..+.....+....+.... ......|.|.+++.+|+|.|+|.|.|.
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~ 312 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC
Confidence 45567889999999999996 9999999999999888654443221111000 011234999999999999999999986
Q ss_pred CEEEEE--e----------c-------------------CCCCCeeEEEeeCCccCcCCC----CcceEEEccCCCCCCe
Q psy15667 86 AGTCEI--T----------P-------------------YDSGPYLIAWFKDGRQIPGRT----SSTSLVINPVGREDRG 130 (286)
Q Consensus 86 ~g~~~~--~----------~-------------------~~~~~~~~~W~~~g~~l~~~~----~~~~l~i~~v~~~d~G 130 (286)
....+ . + .+.+++.+.|+|||+.+.... ....|.|.++..+|+|
T Consensus 313 -~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G 391 (527)
T 3qs9_E 313 -PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPG 391 (527)
T ss_dssp -EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCS
T ss_pred -CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCE
Confidence 32211 1 0 011346799999999885432 3567999999999999
Q ss_pred eEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCe
Q psy15667 131 IYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGAR 210 (286)
Q Consensus 131 ~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~ 210 (286)
.|+|.|.|..|... ..+.|.|..+|.+...+ ....|.|.+.|.|.|.+.|.+.......
T Consensus 392 ~YtC~A~N~~g~~~-~~~~L~V~~~P~i~~~~-------~~~~l~C~a~g~P~p~i~W~~~~~~~~~------------- 450 (527)
T 3qs9_E 392 EYIFHAENDDAQFT-KMFTLNIRRKPQVLAEA-------SASQASCFSDGYPLPSWTWKKCSDKSPN------------- 450 (527)
T ss_dssp CEEEEEEETTEEEE-EEEEEC--CCCEEEECC-------CCE---EEEECSSCCEEEEECCC------------------
T ss_pred EEEEEEEeCCCcEE-EEEEEEEecCCeEEEeC-------CCCEEEEEEEEEcCCeEEEEECCCCcCC-------------
Confidence 99999999998764 46788887776543332 1235677777777777777653221110
Q ss_pred EEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 211 TRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 211 ~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|. .....-.|....... ........+.|.-...+|+|.|+|.|.|.+|....++.|.|
T Consensus 451 ----~~----~~~~~~~~~~~~~~~---------~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V 508 (527)
T 3qs9_E 451 ----CT----EEITEGVWNRKANRK---------VFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNS 508 (527)
T ss_dssp ----CC----CCCCCCEEEC------------------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC--
T ss_pred ----Cc----cccccccceeccccc---------cCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEec
Confidence 00 000000111100000 00011112233333467999999999999999999998876
No 42
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.3e-28 Score=205.57 Aligned_cols=230 Identities=18% Similarity=0.265 Sum_probs=144.3
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|.|.....+.++.+|++++|.|.+.|. +.|++++..+. .++.. ...+.....|.|.+++.+|+|.|+|.|
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~----~~~~~~~~~L~i~~~~~~D~G~Y~C~a 70 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAK----AQDGTFSSVLTLTNLTGLDTGEYFCTH 70 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEE----CTTSCEEEEEEECSCCGGGCEEEEEEC
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceec----cCCCceeEEEEEccCChhhCEEEEEEE
Confidence 667777778899999999999999875 99999998873 22221 112222346999999999999999999
Q ss_pred EcCCEE-------EEEec------C------------------------CCCCeeEEEeeC--CccCcCCC-CcceEEEc
Q psy15667 83 ENRAGT-------CEITP------Y------------------------DSGPYLIAWFKD--GRQIPGRT-SSTSLVIN 122 (286)
Q Consensus 83 ~n~~g~-------~~~~~------~------------------------~~~~~~~~W~~~--g~~l~~~~-~~~~l~i~ 122 (286)
.|..|. ..+.. + ..+.+.+.|+++ +..+.... ....+.
T Consensus 71 ~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~~-- 148 (289)
T 3mjg_X 71 NDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQRGFS-- 148 (289)
T ss_dssp CC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCCEETTTEEE--
T ss_pred cccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCceEEEEeCCCCCccceeecCCcCee--
Confidence 987654 11110 0 012345777775 44443221 111222
Q ss_pred cCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC--CCceecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccc
Q psy15667 123 PVGREDRGIYQCIARRSDGDVAQGSAELQLGG--LPYVRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFA 199 (286)
Q Consensus 123 ~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~--~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~ 199 (286)
..+|+|.|+|.|.|..+...+....|.+.. .|.+... ....+
T Consensus 149 --~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v--------------------------------- 193 (289)
T 3mjg_X 149 --GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVV--------------------------------- 193 (289)
T ss_dssp --ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEE---------------------------------
T ss_pred --eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCccee---------------------------------
Confidence 367999999999987765544445555543 2222111 11233
Q ss_pred cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeec----CCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 200 FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL----DSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 200 ~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.+|+.+.|.|.+. |.|.+.+.|++++.............. ......|.|.++..+|+|.|+|.|.|.+|
T Consensus 194 ------~~G~~v~L~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 266 (289)
T 3mjg_X 194 ------RQGENITLMCIVI-GNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVN 266 (289)
T ss_dssp ------ETTSCEEEEEEEE-SCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTT
T ss_pred ------EcCCCEEEEEEEC-CCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCC
Confidence 3455555555543 456666777766654322111111110 11356899999999999999999999999
Q ss_pred ceeeEEEEEEC
Q psy15667 276 QARYSSKLQVK 286 (286)
Q Consensus 276 ~~~~~~~L~V~ 286 (286)
....++.|.|.
T Consensus 267 ~~~~~~~l~v~ 277 (289)
T 3mjg_X 267 DHQDEKAINIT 277 (289)
T ss_dssp TEEEEEEEEEE
T ss_pred CceeEEEEEEE
Confidence 99999999873
No 43
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.97 E-value=3.4e-32 Score=256.19 Aligned_cols=260 Identities=23% Similarity=0.401 Sum_probs=0.0
Q ss_pred ccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEE
Q psy15667 10 IEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTC 89 (286)
Q Consensus 10 ~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~ 89 (286)
....+.+|++++|.|.+.|.|.+.+.|++||..+....++. + ...|.|.+++.+|+|.|+|.|.|..|..
T Consensus 338 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~--------~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 407 (772)
T 3v2a_R 338 SLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIK--------A--GHVLTIMEVSERDTGNYTVILTNPISKE 407 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEc--------c--ceeEEEecCChhcCceEEEEEEECCcCe
Confidence 35578999999999999999999999999999886532221 1 1248899999999999999999987632
Q ss_pred E------Ee----c--------------------------CCCCCee-EEEeeCCcc-----------------------
Q psy15667 90 E------IT----P--------------------------YDSGPYL-IAWFKDGRQ----------------------- 109 (286)
Q Consensus 90 ~------~~----~--------------------------~~~~~~~-~~W~~~g~~----------------------- 109 (286)
. +. | ...+++. +.|++++..
T Consensus 408 ~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (772)
T 3v2a_R 408 KQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRS 487 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCccccccc
Confidence 1 00 0 0112343 999997321
Q ss_pred ---------CcC---C--------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecC
Q psy15667 110 ---------IPG---R--------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDG 169 (286)
Q Consensus 110 ---------l~~---~--------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g 169 (286)
+.. + .....|.|.++ +|+|.|+|.|.|..|.. ...+.|.|...|.+...+...+.+|
T Consensus 488 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~i~~~p~~~~~~G 564 (772)
T 3v2a_R 488 VEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRG-ERVISFHVTRGPEITLQPDMQPTEQ 564 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEcccccc-ceeEEEEEECCceeeccCCcccccC
Confidence 110 0 01246777766 79999999999998865 3467788877776666665667899
Q ss_pred CCEEEEeeEeeecCCeEEEEEcCCcc---------------------------------------cc----------ccc
Q psy15667 170 EGLSIKCPVAGYPIEEVHWEKVPPKI---------------------------------------ES----------FAF 200 (286)
Q Consensus 170 ~~~~l~c~~~~~p~~~v~w~~~~~~~---------------------------------------~~----------~~~ 200 (286)
+.+.|.|.+.+.|.+.+.|.+....+ .. +..
T Consensus 565 ~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 644 (772)
T 3v2a_R 565 ESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLA 644 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEE
Confidence 99999999999999999998742110 00 000
Q ss_pred -----------------------------ccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCee
Q psy15667 201 -----------------------------PFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS 251 (286)
Q Consensus 201 -----------------------------~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~ 251 (286)
....+.+|+.+.|.|.+. |.|.|.+.|+|+|..+....++.+.. ...
T Consensus 645 ~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~-g~P~p~v~W~k~g~~l~~~~~~~~~~---~~~ 720 (772)
T 3v2a_R 645 QDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTAS-GNPPPQIMWFKDNETLVEDSGIVLKD---GNR 720 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeC-ccCCCeEEEEECCeECcCCCCeEEcC---CCc
Confidence 012256799999999985 78899999999999887655443322 246
Q ss_pred eEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 252 LLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 252 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.|.++..+|+|.|+|.|.|.+|....++.|.|+
T Consensus 721 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 755 (772)
T 3v2a_R 721 NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 755 (772)
T ss_dssp -----------------------------------
T ss_pred EEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEE
Confidence 89999999999999999999999999999999874
No 44
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=3.6e-29 Score=211.88 Aligned_cols=224 Identities=17% Similarity=0.205 Sum_probs=144.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+. .++.+|++++|.|.+.+. .+.+.|+|||..+...... .... ..|.|.+++.+|+|.|+|.
T Consensus 24 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~------~~~~---~~L~I~~v~~~D~G~Y~C~ 92 (316)
T 3vh8_G 24 KPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHG------RIFQ---ESFNMSPVTTAHAGNYTCR 92 (316)
T ss_dssp CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHH------CCBS---SCEEECSCCGGGCEEEEEE
T ss_pred CCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecC------Ccce---EEEEECCCCcccCeEEEEE
Confidence 788887776 678899999999999988 6789999999876432110 0011 2488999999999999999
Q ss_pred EEcCCE-----------EEEEe-----------c---------------CCCCCeeEEEeeCCccCcCC---------CC
Q psy15667 82 AENRAG-----------TCEIT-----------P---------------YDSGPYLIAWFKDGRQIPGR---------TS 115 (286)
Q Consensus 82 a~n~~g-----------~~~~~-----------~---------------~~~~~~~~~W~~~g~~l~~~---------~~ 115 (286)
|.|..+ ...+. + ...++..+.|+|+|..+... ..
T Consensus 93 a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~ 172 (316)
T 3vh8_G 93 GSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVS 172 (316)
T ss_dssp EBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEEETTEE
T ss_pred EEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeeecCCCc
Confidence 875211 11110 0 01234578999999877421 13
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCccee----eeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVA----QGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKV 191 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~----~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~ 191 (286)
...|.|.++..+|+|.|+|.|.|..|... +....|.|...+ +.|.+.-.
T Consensus 173 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~-------------------------~~p~i~~~-- 225 (316)
T 3vh8_G 173 KANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY-------------------------EKPSLSAQ-- 225 (316)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS-------------------------CCCEEEEE--
T ss_pred eEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC-------------------------CCCeEEeC--
Confidence 46799999999999999999999876421 223444443211 01111100
Q ss_pred CCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEE
Q psy15667 192 PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS 271 (286)
Q Consensus 192 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 271 (286)
+...+.+|+.+.|.|.+. .|.+.+.|+|+|..+.................|.|.+++ |+|.|+|.|.
T Consensus 226 ---------~~~~v~~G~~v~L~C~~~--~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~ 292 (316)
T 3vh8_G 226 ---------PGPKVQAGESVTLSCSSR--SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGS 292 (316)
T ss_dssp ---------SCSCCCTTSCCEEEEEES--SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEE
T ss_pred ---------CCCeecCCCcEEEEEECC--CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEee
Confidence 112467888889999875 467899999999876432111111111223689999999 9999999999
Q ss_pred ecccc
Q psy15667 272 NTAAQ 276 (286)
Q Consensus 272 N~~g~ 276 (286)
|..+.
T Consensus 293 n~~~~ 297 (316)
T 3vh8_G 293 FRHSP 297 (316)
T ss_dssp BTTBT
T ss_pred cCCCc
Confidence 97663
No 45
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=8e-28 Score=198.58 Aligned_cols=218 Identities=20% Similarity=0.258 Sum_probs=145.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC--eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE-
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP--DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE- 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p--~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~- 77 (286)
+|.+.. ...+.+|+.++|.|.+.| .|.| .+.|+|||..+.. .+. ..++......+..++.+|+|.
T Consensus 6 ~p~~~~---~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~--~~~------~~~~~~~~~~~~~~~~~d~g~g 74 (265)
T 2oz4_A 6 PPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVT------YGNDSFSAKASVSVTAEDEGTQ 74 (265)
T ss_dssp CCEEEC---CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC--EEE------ECSSEEEEEEEEEECGGGCEEE
T ss_pred CCcccc---CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc--eEe------eCCCeEEEEeecccccccCCcc
Confidence 455543 357899999999999999 8877 9999999998864 221 122222112223447788885
Q ss_pred -EEEEEEcCCEEEEE----ec-------------------------CCCCCeeEEEeeCCccCcCCCCcceEEEccCCCC
Q psy15667 78 -YACVAENRAGTCEI----TP-------------------------YDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGRE 127 (286)
Q Consensus 78 -Y~C~a~n~~g~~~~----~~-------------------------~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~ 127 (286)
|+|.|.|..|.... .. ...+++.++| ||..+........|.|..+..+
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~ 152 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTL--NGVPAQPLGPRAQLLLKATPED 152 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECCTTSEEEE--SSCSSSCCSSEECCEEECCGGG
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEccCCCEEEE--CCEEccCCCCcEEEEEcccccc
Confidence 99999998775321 00 0114568999 8888865555677889999999
Q ss_pred CCeeEEEEEEcC-Ccceee--eeeEEEEcCCCceecC--C-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccc
Q psy15667 128 DRGIYQCIARRS-DGDVAQ--GSAELQLGGLPYVRLI--P-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFP 201 (286)
Q Consensus 128 d~G~Y~C~a~~~-~g~~~~--~~~~l~v~~~~~~~~~--~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~ 201 (286)
|+|.|+|.|.|. .|.... ..+.|.|...|.+... + ...+.+|+.+.|.|.+.
T Consensus 153 ~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~---------------------- 210 (265)
T 2oz4_A 153 NGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW---------------------- 210 (265)
T ss_dssp TTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCE----------------------
T ss_pred CCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECc----------------------
Confidence 999999999754 355422 3456666544433221 1 23444455555555444
Q ss_pred cCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 202 FDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 202 ~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
|.|.|.+.|+|+|..+... +.+. .+..+|+|.|+|.|.|..|....++
T Consensus 211 ------------------g~P~p~i~W~~~~~~~~~~------------g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~ 258 (265)
T 2oz4_A 211 ------------------GNPLPELKCLKDGTFPLPI------------GESV--TVTRDLEGTYLCRARSTQGEVTREV 258 (265)
T ss_dssp ------------------EESCCEEEEEETTTEECCT------------TSCE--ECCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ------------------cCCCCeEEEEECCcccCCC------------CcEE--EeehhhCeEEEEEEECCCCcEEEEE
Confidence 4556677788887622111 1222 4788999999999999999999999
Q ss_pred EEEEC
Q psy15667 282 KLQVK 286 (286)
Q Consensus 282 ~L~V~ 286 (286)
.|.|+
T Consensus 259 ~l~V~ 263 (265)
T 2oz4_A 259 TVNVL 263 (265)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99874
No 46
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=3.3e-27 Score=198.43 Aligned_cols=235 Identities=23% Similarity=0.323 Sum_probs=165.7
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC-CeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN-NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+..+ .++.+... .+ ....|.|.+++.+|+|.|+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~-~~~~L~i~~v~~~d~G~Y~ 78 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEF---KG-GYHQLIIASVTDDDATVYQ 78 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEE---TT-TEEEEEESSCCGGGCSEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEEC---CC-CEEEEEEccCChhhCeEEE
Confidence 4899999999999999999999999999999999999999998754 34433211 12 2246999999999999999
Q ss_pred EEEEcCCEEEEEe--------c----------------------------CCCCCeeEEEeeCCccCcCCC--------C
Q psy15667 80 CVAENRAGTCEIT--------P----------------------------YDSGPYLIAWFKDGRQIPGRT--------S 115 (286)
Q Consensus 80 C~a~n~~g~~~~~--------~----------------------------~~~~~~~~~W~~~g~~l~~~~--------~ 115 (286)
|.|.|..|..... + .+.+++.+.|++++..+.... .
T Consensus 79 C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 158 (305)
T 2nzi_A 79 VRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRS 158 (305)
T ss_dssp EEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSS
T ss_pred EEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCC
Confidence 9999988753211 0 011245799999998875421 2
Q ss_pred cceEEEcc-CCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 116 STSLVINP-VGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 ~~~l~i~~-v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.+ +..+|+|.|+|.|.|..|.. ...+.|.|...|............+..+.|.|...
T Consensus 159 ~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p--------------- 222 (305)
T 2nzi_A 159 FTSLVFPNGVERKDAGFYVVCAKNRFGID-QKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEP--------------- 222 (305)
T ss_dssp EEEEEETTCCCSTTCEEEEEEEEETTEEE-EEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECC---------------
T ss_pred ceEEEEecCCccCccEEEEEEEEeCCCce-eeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCC---------------
Confidence 35799999 99999999999999999875 44677777655432111111112344455544321
Q ss_pred ccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecc
Q psy15667 195 IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 274 (286)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 274 (286)
...|....+.|.+. ..+.+...|.+.+... ...|.|.++...|.|.|+|.|.|.+
T Consensus 223 ----------~~~g~~~i~~y~v~-~~~~~~~~w~~~~~~~--------------~~~~~i~~l~~~~~y~~~~~A~N~~ 277 (305)
T 2nzi_A 223 ----------ASDGGSKITNYIVE-KCATTAERWLRVGQAR--------------ETRYTVINLFGKTSYQFRVIAENKF 277 (305)
T ss_dssp ----------SCCSBSCEEEEEEE-EEETTSCCEEEEEEES--------------SSEEEECSCCSSCEEEEEEEEEETT
T ss_pred ----------ccCCCCceeEEEEE-EecCCCCccEECcccc--------------CceEEecCCCCCCeEEEEEEEEeCC
Confidence 12344445566553 2344556787665432 3468899999999999999999999
Q ss_pred cceeeE
Q psy15667 275 AQARYS 280 (286)
Q Consensus 275 g~~~~~ 280 (286)
|....+
T Consensus 278 G~~~~S 283 (305)
T 2nzi_A 278 GLSKPS 283 (305)
T ss_dssp EECCCC
T ss_pred cccCCc
Confidence 976544
No 47
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=1.8e-28 Score=208.46 Aligned_cols=235 Identities=17% Similarity=0.271 Sum_probs=150.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC----CCCeeEEeeCC--EE-------------c--CCCCeeEeceEEecccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN----PTPDIGWTLDG--FE-------------L--PTNNRFVIGQFVSGHGD 60 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~----p~p~v~W~~~~--~~-------------l--~~~~~~~~~~~~~~~~~ 60 (286)
|+.+...+.++.+.+|++++|.|.+.+. |.+.+.|++++ .. + ....|+.+.. ...+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~--~~~~- 90 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLR--PSFT- 90 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESS--CSSS-
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecc--cCCC-
Confidence 3445556666789999999999999886 55679999954 11 1 1223433210 0011
Q ss_pred eeEEEEEcccccCCCeEEEEE-EEcCCEEEE----Ee---------------------------------cCCCCCeeEE
Q psy15667 61 VISHVNISHVTVEDGGEYACV-AENRAGTCE----IT---------------------------------PYDSGPYLIA 102 (286)
Q Consensus 61 ~~~~l~I~~~~~~D~G~Y~C~-a~n~~g~~~----~~---------------------------------~~~~~~~~~~ 102 (286)
...|.|.+++.+|+|.|+|. +.+..|... +. ....+++.+.
T Consensus 91 -~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~ 169 (331)
T 3u83_A 91 -DGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVS 169 (331)
T ss_dssp -BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEE
T ss_pred -CceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEE
Confidence 12489999999999999998 544444321 00 0011345799
Q ss_pred EeeCCccCc------CCC----CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCE
Q psy15667 103 WFKDGRQIP------GRT----SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGL 172 (286)
Q Consensus 103 W~~~g~~l~------~~~----~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~ 172 (286)
|++++.... ... ....|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...|.+...+
T Consensus 170 W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~l~V~~~P~~~~~~---------- 238 (331)
T 3u83_A 170 WETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRF-KESLTLNVQYEPEVTIEG---------- 238 (331)
T ss_dssp EEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEE-EEEEECCEEEEEEEEEEC----------
T ss_pred EEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcc-eeeEEEEEecCCeEEEec----------
Confidence 999633221 011 12458888899999999999999988764 345666654333221110
Q ss_pred EEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCe-EEEEeCCeeCCCCCCceeeecCCCee
Q psy15667 173 SIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSPRFPVNVSDLDSFSS 251 (286)
Q Consensus 173 ~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~-~~W~~~g~~~~~~~~~~~~~~~~~~~ 251 (286)
.....+.+|+.+.|.|.+. |.|.+. +.|+|++..+.... .+ .+.
T Consensus 239 ---------------------------~~~~~~~~g~~~~l~C~~~-g~p~p~~i~W~~~~~~~~~~~--~~-----~~~ 283 (331)
T 3u83_A 239 ---------------------------FDGNWYLQRMDVKLTCKAD-ANPPATEYHWTTLNGSLPKGV--EA-----QNR 283 (331)
T ss_dssp ---------------------------CCSCCBTTCCCEEEEEEEE-EESCCCEEEEEETTBSCCTTE--EE-----ETT
T ss_pred ---------------------------CCCceEeCCCeEEEEEeCc-CCCCCCEEEEEECCCcccccc--ee-----cCc
Confidence 0112355677777777663 556666 89999988775431 11 135
Q ss_pred eEEEc-ccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 252 LLSIN-SVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 252 ~L~i~-~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.|. ++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 284 ~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 284 TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEe
Confidence 79999 999999999999999999999999998874
No 48
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.96 E-value=1.1e-27 Score=212.30 Aligned_cols=250 Identities=17% Similarity=0.256 Sum_probs=162.9
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCee-----EEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDI-----GWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v-----~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
|.+.+.++++.+|++++|.|.+.| |.|.+ .|+|++..+.. .++ ..|.|.+++. |+| |+
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~-~~~-------------~~l~i~~v~~-d~g-Y~ 64 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG-NNR-------------KVYELSNVQE-DSQ-PM 64 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST-TTE-------------EEEEEEEECS-CBC-CE
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC-CCc-------------eEEEEEeccc-CCe-eE
Confidence 567888899999999999999999 99998 89998765432 221 2478999987 999 99
Q ss_pred EEEEcCCEEEE----Ee----------------------------cCCCCCe---eEEEeeCCccCcCC-----CCcceE
Q psy15667 80 CVAENRAGTCE----IT----------------------------PYDSGPY---LIAWFKDGRQIPGR-----TSSTSL 119 (286)
Q Consensus 80 C~a~n~~g~~~----~~----------------------------~~~~~~~---~~~W~~~g~~l~~~-----~~~~~l 119 (286)
|.|.+..+... +. ....+++ .+.|+|||..+... .....|
T Consensus 65 C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~~L 144 (450)
T 1z7z_I 65 CYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTT 144 (450)
T ss_dssp EEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEE
T ss_pred EEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccceEE
Confidence 99987655322 10 0112344 89999999887431 223589
Q ss_pred EEccCCCCCCeeEEEEEEcCCccee-------eeeeEEEEcCCCce--ecCCceEEecCCCEEEEeeEeee-c--CCeEE
Q psy15667 120 VINPVGREDRGIYQCIARRSDGDVA-------QGSAELQLGGLPYV--RLIPKVTAIDGEGLSIKCPVAGY-P--IEEVH 187 (286)
Q Consensus 120 ~i~~v~~~d~G~Y~C~a~~~~g~~~-------~~~~~l~v~~~~~~--~~~~~~~~~~g~~~~l~c~~~~~-p--~~~v~ 187 (286)
.|.++..+|+|.|+|.|.|..|... .....|.+...+.. .......+.+|+.+.|.|.+.+. | .+.+.
T Consensus 145 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~ 224 (450)
T 1z7z_I 145 TVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVH 224 (450)
T ss_dssp EEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGCEEE
T ss_pred EEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCceEEE
Confidence 9999999999999999999866421 12334455433111 01111567789999999999998 7 68899
Q ss_pred EEEcCCccc----------------------cc-------------------------------ccccCCCCCCCeEEEE
Q psy15667 188 WEKVPPKIE----------------------SF-------------------------------AFPFDGLPEGARTRVI 214 (286)
Q Consensus 188 w~~~~~~~~----------------------~~-------------------------------~~~~~~~~~g~~~~l~ 214 (286)
|.+....+. .. ......+.+|+.+.|.
T Consensus 225 W~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~~~~v~~G~~v~l~ 304 (450)
T 1z7z_I 225 LALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVK 304 (450)
T ss_dssp EEETTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEE
T ss_pred EeCCCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecCCeeEeCCCcEEEE
Confidence 986321100 00 0001235689999999
Q ss_pred EeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc-c---eeeEEEEEE
Q psy15667 215 CGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA-Q---ARYSSKLQV 285 (286)
Q Consensus 215 c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~---~~~~~~L~V 285 (286)
|.+. |.+.+.| +|..+... .....|.|..+..+|+|.|+|.|.|..| . ...++.|.|
T Consensus 305 C~~~---p~p~i~W--~g~~~~~~---------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V 365 (450)
T 1z7z_I 305 CEAH---PRAKVTL--NGVPAQPL---------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV 365 (450)
T ss_dssp EEC------------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEE
T ss_pred EecC---CCCEeEE--CCEEcCCC---------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEE
Confidence 9985 8899999 77766211 1134789999999999999999998765 3 335566655
No 49
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.96 E-value=1.4e-26 Score=211.70 Aligned_cols=267 Identities=18% Similarity=0.214 Sum_probs=178.7
Q ss_pred ccccccccCCCcEEEEEEeecCCCC---eeEEeeCCEEcC--------------CCCeeEeceEEecccceeEEEEEccc
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTP---DIGWTLDGFELP--------------TNNRFVIGQFVSGHGDVISHVNISHV 70 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p---~v~W~~~~~~l~--------------~~~~~~~~~~~~~~~~~~~~l~I~~~ 70 (286)
.+.++.+.+|++++|.|.+.+.|.+ .+.|+|++..+. ...|+.+.. ...+....|.|.++
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~~g~~~L~I~~v 82 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTN---FPENGTFVVNIAQL 82 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEe---cCCCCEEEEEECCC
Confidence 4667889999999999999998755 899999985431 112332211 00122246999999
Q ss_pred ccCCCeEEEEEEEcCCEEEE----Ee---------------------------cCC-CCCeeEEEeeCCccCc-------
Q psy15667 71 TVEDGGEYACVAENRAGTCE----IT---------------------------PYD-SGPYLIAWFKDGRQIP------- 111 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~----~~---------------------------~~~-~~~~~~~W~~~g~~l~------- 111 (286)
+.+|+|.|+|.|.|..+... +. ... .+++.+.|+|++....
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 83 SQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred CcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCC
Confidence 99999999999988765321 10 001 1235699999876421
Q ss_pred --------CCC---------CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEE
Q psy15667 112 --------GRT---------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSI 174 (286)
Q Consensus 112 --------~~~---------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l 174 (286)
.+. ....|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...+ ...+.+.+|+.+.|
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~----p~~~~~~~G~~v~l 237 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSN-KKNADLQVLKPE----PELVYEDLRGSVTF 237 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccc-cceEEEEEccCC----CceeEEcCCCcEEE
Confidence 110 01269999999999999999999988865 456778876543 12345678999999
Q ss_pred EeeEeeecC---CeEEEE-EcCC-------------------------------ccc--c----------c--------c
Q psy15667 175 KCPVAGYPI---EEVHWE-KVPP-------------------------------KIE--S----------F--------A 199 (286)
Q Consensus 175 ~c~~~~~p~---~~v~w~-~~~~-------------------------------~~~--~----------~--------~ 199 (286)
.|.+ +.|. +.+.|. +... .+. . | .
T Consensus 238 ~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~ 316 (585)
T 2ocw_A 238 HCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQ 316 (585)
T ss_pred EEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCcc
Confidence 9997 4444 567785 3220 000 0 0 0
Q ss_pred -----c----------------ccCCCCCCCeEEEEEeeecCCCCCeE----EEEe--CCe--eCCC---------CCCc
Q psy15667 200 -----F----------------PFDGLPEGARTRVICGVTHGDPPLTI----RWLK--DGK--PLSP---------RFPV 241 (286)
Q Consensus 200 -----~----------------~~~~~~~g~~~~l~c~~~~~~p~~~~----~W~~--~g~--~~~~---------~~~~ 241 (286)
. ....+.+|+.+.|.|.+. +.|.+.+ .|+| +|. .+.. ..++
T Consensus 317 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~-~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~ 395 (585)
T 2ocw_A 317 EGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYN-RKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRL 395 (585)
T ss_pred ccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecC-CCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCE
Confidence 0 011245799999999985 7777776 7999 887 4422 1222
Q ss_pred eeeec-CCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 242 NVSDL-DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 242 ~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+... ......|.|.++..+|+|.|+|.| |..|....++.|.|
T Consensus 396 ~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V 439 (585)
T 2ocw_A 396 SLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKI 439 (585)
T ss_pred EEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEE
Confidence 22211 111234999999999999999999 99998888888877
No 50
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.95 E-value=1.8e-27 Score=205.31 Aligned_cols=194 Identities=14% Similarity=0.193 Sum_probs=143.9
Q ss_pred cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 11 EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
...+.+|++++|.|.+.++|.|.+.|++++..+.. .. ..|.|.+++.+|+|.|+|.|.|..+...
T Consensus 105 ~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~------------~~---~~L~i~~v~~~d~G~Y~C~a~~~~~~~~ 169 (363)
T 1wio_A 105 DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ------------GG---KTLSVSQLELQDSGTWTCTVLQNQKKVE 169 (363)
T ss_dssp CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE------------ES---SEEEECSBCGGGCEECEEEEEETTEEEE
T ss_pred ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc------------cc---eEEEEeeCChhcCCEEEEEEecCCCeEE
Confidence 45788999999999999999999999999754310 11 2488999999999999999998776543
Q ss_pred Ee--------------------------c--CC-----CCCeeEEEeeCCccCcCC-------C----------------
Q psy15667 91 IT--------------------------P--YD-----SGPYLIAWFKDGRQIPGR-------T---------------- 114 (286)
Q Consensus 91 ~~--------------------------~--~~-----~~~~~~~W~~~g~~l~~~-------~---------------- 114 (286)
.. . .. .+.+.+.|+++|..+... .
T Consensus 170 ~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (363)
T 1wio_A 170 FKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQM 249 (363)
T ss_dssp ECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBC
T ss_pred EEEEEEEecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhc
Confidence 21 0 01 124689999999876541 0
Q ss_pred -C--cceEEEccCCCCCCeeEEEEEEcC--CcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEE
Q psy15667 115 -S--STSLVINPVGREDRGIYQCIARRS--DGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWE 189 (286)
Q Consensus 115 -~--~~~l~i~~v~~~d~G~Y~C~a~~~--~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~ 189 (286)
. ...|.|.++..+|+|.|+|.|.|. .|.. ...+.|.|. ...|+.+.|.|.+.+
T Consensus 250 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~-~~~~~l~V~------------~v~g~~~~l~C~~~g--------- 307 (363)
T 1wio_A 250 GKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKL-HQEVNLVVM------------RATQLQKNLTCEVWG--------- 307 (363)
T ss_dssp CSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCE-EEEEEEEEE------------EECCCSSSEEEEEES---------
T ss_pred ccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeE-EEEEeEEEE------------EecCCCeeEEEEEcc---------
Confidence 1 348999999999999999999999 8864 445666653 112566666665544
Q ss_pred EcCCcccccccccCCCCCCCeEEEEEeeecCCCCCe--EEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEE
Q psy15667 190 KVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLT--IRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYT 267 (286)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~--~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 267 (286)
.|+|. +.|+|+|..+.. +..|.|.++..+|+|.|+
T Consensus 308 -------------------------------~p~p~~~i~W~~~~~~~~~------------~~~l~i~~v~~~d~G~Y~ 344 (363)
T 1wio_A 308 -------------------------------PTSPKLMLSLKLENKEAKV------------SKREKAVWVLNPEAGMWQ 344 (363)
T ss_dssp -------------------------------SCCTTCCEEEECSSSSCSE------------EESSSEEEESSCCSEEEE
T ss_pred -------------------------------ccCCCccEEEEeCCCceee------------eeeeeeeeeccccceeEE
Confidence 34444 889999876642 345778999999999999
Q ss_pred EEEEecccceeeEEEEEE
Q psy15667 268 CVASNTAAQARYSSKLQV 285 (286)
Q Consensus 268 C~a~N~~g~~~~~~~L~V 285 (286)
|.|.|. |....++.|.|
T Consensus 345 C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 345 CLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp EEECSS-SSCCEEEEEEE
T ss_pred EEEecC-CeEEEecceEe
Confidence 999965 66677777776
No 51
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.95 E-value=8.5e-29 Score=233.03 Aligned_cols=274 Identities=20% Similarity=0.279 Sum_probs=55.7
Q ss_pred CeeEecccc-ccccCCCcEEEEEEeec--CCCCeeEEeeCCEEcCCCCeeEeceEEe---cccceeEEEEEcccccCCCe
Q psy15667 3 PILTYSFIE-QTLQPGPAVSLKCIASG--NPTPDIGWTLDGFELPTNNRFVIGQFVS---GHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 3 p~~~~~~~~-~~~~~G~~~~l~C~~~g--~p~p~v~W~~~~~~l~~~~~~~~~~~~~---~~~~~~~~l~I~~~~~~D~G 76 (286)
|.+...+.. ..+.+|++++|.|.+.+ +|.+.+.|++++..+............. ........|.|.+++.+|+|
T Consensus 224 ~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 303 (772)
T 3v2a_R 224 YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQG 303 (772)
T ss_dssp EEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCS
T ss_pred ceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCe
Confidence 344444544 58999999999999998 5567899999998765433221100000 11112346999999999999
Q ss_pred EEEEEEEcCCEEEE----Ee----c--------------------------CCCCCeeEEEeeCCccCcCCC---CcceE
Q psy15667 77 EYACVAENRAGTCE----IT----P--------------------------YDSGPYLIAWFKDGRQIPGRT---SSTSL 119 (286)
Q Consensus 77 ~Y~C~a~n~~g~~~----~~----~--------------------------~~~~~~~~~W~~~g~~l~~~~---~~~~l 119 (286)
.|+|.|.|..+... +. | ...+++.+.|+|||..+..+. ....|
T Consensus 304 ~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L 383 (772)
T 3v2a_R 304 LYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVL 383 (772)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCC------------------------------------------------------
T ss_pred EEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeE
Confidence 99999999876432 10 0 011345789999999886532 23789
Q ss_pred EEccCCCCCCeeEEEEEEcCCccee-eeeeEEEEcCCCceecC----CceEEecCCCEEEEeeEeeecCCe-EEEEEcCC
Q psy15667 120 VINPVGREDRGIYQCIARRSDGDVA-QGSAELQLGGLPYVRLI----PKVTAIDGEGLSIKCPVAGYPIEE-VHWEKVPP 193 (286)
Q Consensus 120 ~i~~v~~~d~G~Y~C~a~~~~g~~~-~~~~~l~v~~~~~~~~~----~~~~~~~g~~~~l~c~~~~~p~~~-v~w~~~~~ 193 (286)
.|.++..+|+|.|+|.+.|..|... +..+.|.|..+|.+... +...+..|+.+.|.|.+.+.|.|. +.|.+...
T Consensus 384 ~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~ 463 (772)
T 3v2a_R 384 TIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLE 463 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCC
Confidence 9999999999999999999877542 23456666666654322 222467899999999999999997 99987300
Q ss_pred --------------------------------cc-----------------cc-------------cc------------
Q psy15667 194 --------------------------------KI-----------------ES-------------FA------------ 199 (286)
Q Consensus 194 --------------------------------~~-----------------~~-------------~~------------ 199 (286)
.+ .. +.
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~~d~G~Y~C~a~N~~g~~~~~~ 543 (772)
T 3v2a_R 464 EECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVI 543 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeecccCeEEEEEEEccccccceeE
Confidence 00 00 00
Q ss_pred ------------cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceee-------------------ecCC
Q psy15667 200 ------------FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS-------------------DLDS 248 (286)
Q Consensus 200 ------------~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~-------------------~~~~ 248 (286)
.+...+.+|+.+.|.|.+. +.|.+.+.|+|+|..+......... ....
T Consensus 544 ~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~-~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (772)
T 3v2a_R 544 SFHVTRGPEITLQPDMQPTEQESVSLWCTAD-RSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTN 622 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCceeeccCCcccccCCceEEEEecc-CCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCC
Confidence 0012356799999999985 7788999999998765432211110 0001
Q ss_pred CeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 249 FSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 249 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
....|.|.++..+|+|.|+|.|.|..|..
T Consensus 623 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 651 (772)
T 3v2a_R 623 DILIMELKNASLQDQGDYVCLAQDRKTKK 651 (772)
T ss_dssp -----------------------------
T ss_pred ceEEEEECCCCccCCcEEEEEEEeCCCCe
Confidence 12349999999999999999999976543
No 52
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.95 E-value=5.6e-26 Score=178.83 Aligned_cols=186 Identities=23% Similarity=0.322 Sum_probs=128.7
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC-CeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN-NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+..+ .++.+.. ..+ ....|.|.+++.+|+|.|+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~---~~~-~~~~L~i~~~~~~d~G~Y~ 78 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQE---FKG-GYHQLIIASVTDDDATVYQ 78 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEE---ETT-TEEEEEECSCCGGGCSEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEE---cCC-CEEEEEECcCCHHhCEEEE
Confidence 4899999999999999999999999999999999999999988753 3443311 111 1235778888888888888
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR 159 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~ 159 (286)
|.|.|..|.... .+.|.|...|.+.
T Consensus 79 C~~~n~~g~~~~-------------------------------------------------------~~~l~V~~~p~~~ 103 (197)
T 2j8h_A 79 VRATNQGGSVSG-------------------------------------------------------TASLEVEVPAKIH 103 (197)
T ss_dssp EEEEETTEEEEE-------------------------------------------------------EEEEEEEEEEEEC
T ss_pred EEEEECCCceeE-------------------------------------------------------EEEEEEcCCCcCC
Confidence 887776554321 1122221111110
Q ss_pred ------cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCe
Q psy15667 160 ------LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK 233 (286)
Q Consensus 160 ------~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~ 233 (286)
......+..|+.+.|.|.+.+ .|.+.+.|+|++.
T Consensus 104 ~~~~~~~~~~~~~~~g~~~~l~C~~~g----------------------------------------~p~p~i~W~~~~~ 143 (197)
T 2j8h_A 104 LPKTLEGMGAVHALRGEVVSIKIPFSG----------------------------------------KPDPVITWQKGQD 143 (197)
T ss_dssp CSSCBTTBEEEEEETTCCCEEEEEEEE----------------------------------------ESCCEEEEEESSC
T ss_pred CCccccccCeEEEeCCCEEEEEEEEEe----------------------------------------cCCCcEEEEECCE
Confidence 001123345555555555544 4556778888888
Q ss_pred eCCCCCCceeeecCCCeeeEEEcc-cCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 234 PLSPRFPVNVSDLDSFSSLLSINS-VSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+....++.+... .....|.|.+ +..+|+|.|+|.|.|..|....++.|.|.
T Consensus 144 ~~~~~~~~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 144 LIDNNGHYQVIVT-RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EECSSSSCEEEEC-SSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EeecCCCEEEEEc-CCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 7765555554432 2356899999 99999999999999999999999999873
No 53
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=185.11 Aligned_cols=198 Identities=16% Similarity=0.165 Sum_probs=125.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.|...+ +..+.+|+.+.|.|.+.+ .|.|.|+|+|||++|..+.++.+.. ...+....|.|.+++.+|+|.|+|
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~---~~~~g~~~L~I~~v~~~D~G~Y~C 78 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHI---DRNTGIIEMFMEKLQDEDEGTYTF 78 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEE---CTTTCEEEEEESCCCGGGCEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEE---eCCCCEEEEEECCCChhhCEEEEE
Confidence 57777544 688999999999999874 7999999999999998777765421 111233468899999999999999
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE-----cCC
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL-----GGL 155 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v-----~~~ 155 (286)
.|.|.......... . -+..+. .. .....+.+ ...
T Consensus 79 ~a~Ng~a~~~~~~~--------~--~~~~~~------------------------------~~-~~~~~~~~~~~~~~~~ 117 (207)
T 3rbs_A 79 QLQDGKATNHSTVV--------L--VGDVFK------------------------------KL-QKEAEFQRQEWIRKQG 117 (207)
T ss_dssp EEEETTEEEEEEEE--------E--CTHHHH------------------------------HH-HHHHHHHHHHHHHHTS
T ss_pred EEECCCeEEEEEEE--------E--Eccchh------------------------------hh-cccccccccccccCCC
Confidence 98884333221100 0 000000 00 00000000 001
Q ss_pred CceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC
Q psy15667 156 PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL 235 (286)
Q Consensus 156 ~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~ 235 (286)
|.+....... +.+|+.+.|.|.+....|.|.+.|+|+|..+
T Consensus 118 P~~~~~~~~~---------------------------------------v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 118 PHFVEYLSWE---------------------------------------VTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp SEEEEEEEEE---------------------------------------EETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred CceEecCCcE---------------------------------------EcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 1100000112 3356666666665432378899999999988
Q ss_pred CCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 236 SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 236 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
....++.. .....+|.|.++..+|+|.|+|.|.|.+|...+++.|+++
T Consensus 159 ~~~~~~~~---~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 159 SVDEKHDF---KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp CCCCCCCC---SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCCceEc---CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 76544321 1224579999999999999999999999999999999764
No 54
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.95 E-value=1e-25 Score=179.76 Aligned_cols=183 Identities=27% Similarity=0.483 Sum_probs=123.2
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcC-CCCeeEeceEEecccceeEEEEEccccc-CCCeEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELP-TNNRFVIGQFVSGHGDVISHVNISHVTV-EDGGEY 78 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~-~~~~~~~~~~~~~~~~~~~~l~I~~~~~-~D~G~Y 78 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+. ...++.+.. ..+....|.|.+++. +|+|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~~d~G~Y 80 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLE----QPGGISILRIEPVRAGRDDAPY 80 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEE----ETTTEEEEEESSCCTTTTCSEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEE----cCCCeEEEEEEecCCCCcCceE
Confidence 48999999999999999999999999999999999999999986 344543311 111123466666666 666666
Q ss_pred EEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC---
Q psy15667 79 ACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL--- 155 (286)
Q Consensus 79 ~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~--- 155 (286)
+|.|.|..|. .....+.|.|...
T Consensus 81 ~C~~~n~~g~------------------------------------------------------~~~~~~~l~V~~~~~~ 106 (212)
T 2yd1_A 81 ECVAENGVGD------------------------------------------------------AVSADATLTIYEGDKT 106 (212)
T ss_dssp EEEEECSSSC------------------------------------------------------EEEEEEEEEEECTTCS
T ss_pred EEEEEeCCCC------------------------------------------------------eEEeeEEEEEecccCC
Confidence 6666664432 1122333333322
Q ss_pred ----CceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe
Q psy15667 156 ----PYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK 230 (286)
Q Consensus 156 ----~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~ 230 (286)
|.+...+ ... +.+|+.+.|.|.+. |.|.+.+.|++
T Consensus 107 ~~~~p~~~~~~~~~~---------------------------------------~~~g~~v~l~C~~~-g~p~p~i~W~~ 146 (212)
T 2yd1_A 107 PAGFPVITQGPGTRV---------------------------------------IEVGHTVLMTCKAI-GNPTPNIYWIK 146 (212)
T ss_dssp CTTCCEEEECCCCEE---------------------------------------EETTCCEEECCEEE-CSSCCEEEEEE
T ss_pred CCCCCeeEeCCCceE---------------------------------------eecCCeEEEEEEec-cCCCCeEEEEE
Confidence 1111111 122 23455555555553 56777889999
Q ss_pred CCeeCCCCC-CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE-EEEEEC
Q psy15667 231 DGKPLSPRF-PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS-SKLQVK 286 (286)
Q Consensus 231 ~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~L~V~ 286 (286)
++..+.... ++.+. .+.|.|.++..+|+|.|+|.|.|..|..... +.|.|+
T Consensus 147 ~~~~~~~~~~~~~~~-----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 147 NQTKVDMSNPRYSLK-----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp TTEECCTTSTTEEEE-----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCeEcccCCCeEEcc-----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 999886533 22221 3489999999999999999999999988765 788874
No 55
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.95 E-value=7.3e-26 Score=177.64 Aligned_cols=184 Identities=23% Similarity=0.390 Sum_probs=126.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC--eeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN--RFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.+..+.+|++++|.|.+.|.|.+.+.|+++|..+.... ++.+.. .++ ...|.|.+++.+|+|.|+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~----~~~-~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISF----SDG-RAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEE----ETT-EEEEEESSCCGGGCEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEe----CCC-EEEEEECCCCcccCEEEE
Confidence 7899999999999999999999999999999999999998886543 332211 111 234777777777777777
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CC
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LP 156 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~ 156 (286)
|.+.|..|.... ...|.|.. +|
T Consensus 80 C~~~n~~~~~~~-------------------------------------------------------~~~l~v~~~~~~p 104 (194)
T 2a38_A 80 LKATNGSGQATS-------------------------------------------------------TAELLVKAETAPP 104 (194)
T ss_dssp EEEEETTEEEEE-------------------------------------------------------EEEEEEECCCEEE
T ss_pred EEEEcCCceEeE-------------------------------------------------------EEEEEEccCCCCC
Confidence 777775544321 11222211 01
Q ss_pred ceec-CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC
Q psy15667 157 YVRL-IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL 235 (286)
Q Consensus 157 ~~~~-~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~ 235 (286)
.+.. ..... +.+|+.+.|.|.+ .+.|.+.+.|+|+|..+
T Consensus 105 ~~~~~~~~~~---------------------------------------~~~g~~~~l~C~~-~g~p~~~v~W~~~~~~~ 144 (194)
T 2a38_A 105 NFVQRLQSMT---------------------------------------VRQGSQVRLQVRV-TGIPTPVVKFYRDGAEI 144 (194)
T ss_dssp EEEECCCCEE---------------------------------------ECTTEEEEEEEEE-EEESCCEEEEEETTEEC
T ss_pred EEEeCCccEE---------------------------------------EcCCCEEEEEEEE-EEecCCeEEEEECCEEC
Confidence 0100 01122 3345555555555 24566778899999988
Q ss_pred CCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 236 SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 236 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 145 ~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 145 QSSLDFQISQE-GDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp CCSSSEEEEEE-TTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCcEEEEEc-CCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 76655554432 224479999999999999999999999999999999986
No 56
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=2.2e-25 Score=193.59 Aligned_cols=232 Identities=23% Similarity=0.368 Sum_probs=154.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC--CEEcCC-----CCeeEeceEEecccceeEEEEEcccccCC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD--GFELPT-----NNRFVIGQFVSGHGDVISHVNISHVTVED 74 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--~~~l~~-----~~~~~~~~~~~~~~~~~~~l~I~~~~~~D 74 (286)
+|.|.. +.+.++.+|++++|.|.+.|.|.|.|.|+|+ |..|.. +.++.+.. . .....|.|.+++.+|
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~----~-~~~~~L~i~~v~~~D 74 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG----Q-HGSSSLHIKDVKLSD 74 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEE----C-SSEEEEEEESCCGGG
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEec----c-CCcceEEEcccChhh
Confidence 578886 7788888999999999999999999999999 888864 34554311 1 123469999999999
Q ss_pred CeEEEEEEEcCCEEEEEe--------c-----------------------CCCCCeeEEEeeCCccCcCCC---------
Q psy15667 75 GGEYACVAENRAGTCEIT--------P-----------------------YDSGPYLIAWFKDGRQIPGRT--------- 114 (286)
Q Consensus 75 ~G~Y~C~a~n~~g~~~~~--------~-----------------------~~~~~~~~~W~~~g~~l~~~~--------- 114 (286)
+|.|+|.|.|..|..... | .+.+++.+.|+|||..+....
T Consensus 75 ~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~ 154 (389)
T 2jll_A 75 SGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYST 154 (389)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEEC
T ss_pred CEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEecc
Confidence 999999999988753210 0 011346799999999886432
Q ss_pred -CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCC
Q psy15667 115 -SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPP 193 (286)
Q Consensus 115 -~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~ 193 (286)
....|.|.++..+|+|.|+|.|.|..|... ..+.+.+...|............+..+.|.|....
T Consensus 155 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~-~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~------------- 220 (389)
T 2jll_A 155 GRKMILEIAPTSDNDFGRYNCTATNHIGTRF-QEYILALADVPSSPYGVKIIELSQTTAKVSFNKPD------------- 220 (389)
T ss_dssp SSCEEEEECCCSTTSSEEEEEEEEETTEEEE-EEEEEEECCCCCCCEEEEEEEECSSCEEEEEECCS-------------
T ss_pred CCEEEEEECCCChhhCEEEEEEEEcCCCcEE-EEEEEEecCCCCCCcceEEeeccCCEEEEEEeCCC-------------
Confidence 235699999999999999999999998753 45566654443211000011112233343332100
Q ss_pred cccccccccCCCCCCCeEEEEEeeecCCCC--CeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEE
Q psy15667 194 KIESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS 271 (286)
Q Consensus 194 ~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~--~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 271 (286)
...+.|. ..+.|.+++.... ..+ ........|.|.++...|.|.|+|.|.
T Consensus 221 -----------------------~~~g~pi~~y~v~~~~~~~~~~----~~~-~~~~~~~~~~i~~l~~~~~y~~~v~A~ 272 (389)
T 2jll_A 221 -----------------------SHGGVPIHHYQVDVKEVASEIW----KIV-RSHGVQTMVVLNNLEPNTTYEIRVAAV 272 (389)
T ss_dssp -----------------------CCTTSCEEEEEEEEEETTCSCC----EEE-ECSTTCSEEEECSCCTTCEEEEEEEEE
T ss_pred -----------------------CCCCcceEEEEEEEEECCCccc----EEe-eccCCcceEEECCccCCCEEEEEEEEE
Confidence 0012222 2466877764221 111 111224578999999999999999999
Q ss_pred ecccceeeEE
Q psy15667 272 NTAAQARYSS 281 (286)
Q Consensus 272 N~~g~~~~~~ 281 (286)
|..|....+.
T Consensus 273 N~~G~~~~s~ 282 (389)
T 2jll_A 273 NGKGQGDYSK 282 (389)
T ss_dssp ESSCBCCCCC
T ss_pred cCCccCCCCc
Confidence 9998765443
No 57
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.94 E-value=3e-25 Score=173.77 Aligned_cols=183 Identities=27% Similarity=0.495 Sum_probs=122.6
Q ss_pred CCCeeEeccc--cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 1 TPPILTYSFI--EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 1 ~~p~~~~~~~--~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
+||.|.+... ++++.+|++++|.|.+.|.|.+.+.|++++..+....++.+. ... ..|.|.+++.+|+|.|
T Consensus 1 spP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~----~~~---~~L~i~~~~~~d~G~Y 73 (192)
T 2va4_A 1 SMPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK----GSN---TELTVRNIINSDGGPY 73 (192)
T ss_dssp CCCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE----TTT---TEEEECSCCGGGCEEE
T ss_pred CCCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe----CCe---eEEEEecCChhcCcEE
Confidence 5899987655 568999999999999999999999999999998776665431 111 1377888888888888
Q ss_pred EEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce
Q psy15667 79 ACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV 158 (286)
Q Consensus 79 ~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~ 158 (286)
+|.+.|..|... ....|.|...|.+
T Consensus 74 ~C~~~~~~~~~~-------------------------------------------------------~~~~l~V~~~p~~ 98 (192)
T 2va4_A 74 VCRATNKAGEDE-------------------------------------------------------KQAFLQVFVQPHI 98 (192)
T ss_dssp EEEEEETTEEEE-------------------------------------------------------EEEEEEEEEEEEE
T ss_pred EEEEEccccccc-------------------------------------------------------eEEEEEEEccCcc
Confidence 887777654432 1122222222222
Q ss_pred ecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeC--CeeCC
Q psy15667 159 RLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKD--GKPLS 236 (286)
Q Consensus 159 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~--g~~~~ 236 (286)
...+...+..|+.+.|.|.+.+.|.+.+. |+|+ +..+.
T Consensus 99 ~~~~~~~~~~g~~v~l~C~~~~~p~~~v~----------------------------------------W~~~~~~~~~~ 138 (192)
T 2va4_A 99 IQLKNETTYENGQVTLVCDAEGEPIPEIT----------------------------------------WKRAVDGFTFT 138 (192)
T ss_dssp EEECCEEECTTSEEEEEEEEEEESCCEEE----------------------------------------EEETTTTEEEC
T ss_pred cccCcceEEeCCeEEEEEEecCCCCCcEE----------------------------------------EEeCCCCceee
Confidence 22223344456667777766665555444 5554 33222
Q ss_pred C-----CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 237 P-----RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 237 ~-----~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
. ..++.+.. ......|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 139 ~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 139 EGDKSLDGRIEVKG-QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp TTCBCTTSCEEEEE-ETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ccccccCCcEEEee-ccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 1 11222221 1235689999999999999999999999999999999986
No 58
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.6e-25 Score=175.84 Aligned_cols=184 Identities=24% Similarity=0.402 Sum_probs=129.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|++++|.|.+.+.|.+.+.|++++..+....++.+.. . +....|.|.+++.+|+|.|+|.
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~-~~~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSS----D-GRTHTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEE----S-SSEEEEEEECCSGGGCEEEEEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEe----C-CCEEEEEEecCCccCCEEEEEE
Confidence 7899999999999999999999999999999999999999987766664321 1 2223578888888888888888
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee--
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR-- 159 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~-- 159 (286)
+.|..|.... ...|.|...|.+.
T Consensus 82 ~~n~~~~~~~-------------------------------------------------------~~~l~v~~~p~~~~~ 106 (197)
T 3lcy_A 82 ATNEVGEVET-------------------------------------------------------SSKLLLQATPQFHPG 106 (197)
T ss_dssp EECSSCEEEE-------------------------------------------------------EEEEEEEEEEEECTT
T ss_pred EECCCCceeE-------------------------------------------------------EEEEEEEcCCCCCCC
Confidence 8776544321 1112221111110
Q ss_pred --cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 160 --LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 160 --~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
......+..|+.+.|.|.+.+ .|.+.+.|++++..+..
T Consensus 107 ~~~~~~~~~~~g~~~~l~C~~~~----------------------------------------~p~p~v~W~~~~~~~~~ 146 (197)
T 3lcy_A 107 YPLKEKYYGAVGSTLRLHVMYIG----------------------------------------RPVPAMTWFHGQKLLQN 146 (197)
T ss_dssp SCCCSEEEEETTSCEEEEEEEEE----------------------------------------ESCCEEEEEETTEECCC
T ss_pred ccCCcceeecCCCeEEEEEEEee----------------------------------------eeCCeeEEeECCEECCC
Confidence 011223345555555555544 45567788888888876
Q ss_pred CCCceeeecCCCeeeEEEcccCC-CCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 238 RFPVNVSDLDSFSSLLSINSVSA-AHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
..++.+... .....|.|.++.. +|+|.|+|.|.|..|....++.|.|+
T Consensus 147 ~~~~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 147 SENITIENT-EHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp CSSEEEEEC-SSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCceEEEEc-CCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 665555432 2346899999995 89999999999999999999998873
No 59
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.94 E-value=6.4e-25 Score=172.66 Aligned_cols=184 Identities=20% Similarity=0.339 Sum_probs=120.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCC--eeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNN--RFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.|...+.+..+.+|++++|.|.+. |.|.+.+.|++||..+.... ++.+.. .. ...+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~----~~-------------~~~~~~ 64 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPL----GE-------------DEQDDW 64 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEEC----SS-------------STTSEE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEE----cc-------------ccccce
Confidence 89999999999999999999999999 99999999999999986542 221100 00 000111
Q ss_pred EEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce
Q psy15667 79 ACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV 158 (286)
Q Consensus 79 ~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~ 158 (286)
. ....|.|.++..+|+|.|+|.+.|..+......+.|.|...|.+
T Consensus 65 ~-----------------------------------~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~ 109 (195)
T 2c5d_C 65 I-----------------------------------VVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYF 109 (195)
T ss_dssp E-----------------------------------EEEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEE
T ss_pred e-----------------------------------eccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeE
Confidence 0 01245555566666666666665554443333355666555543
Q ss_pred ecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCC
Q psy15667 159 RLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLS 236 (286)
Q Consensus 159 ~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~ 236 (286)
...+ ...+ .+|+.+.|.|.+. |.|.+ .+.|+|++..+.
T Consensus 110 ~~~~~~~~~---------------------------------------~~g~~~~l~C~~~-g~p~p~~v~W~~~~~~~~ 149 (195)
T 2c5d_C 110 LEEPEDRTV---------------------------------------AANTPFNLSCQAQ-GPPEPVDLLWLQDAVPLA 149 (195)
T ss_dssp EECCCCEEE---------------------------------------CTTCCEEEEEEEE-CSSCCCEEEEEESSCBSS
T ss_pred EcCCCcEEE---------------------------------------cCCCEEEEEeECC-CCCCCCEEEEEECCEecc
Confidence 3222 1233 3455555555543 45666 889999998876
Q ss_pred CCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccccee-eEEEEEE
Q psy15667 237 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQV 285 (286)
Q Consensus 237 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~L~V 285 (286)
..... .....|.|.++. |+|.|+|.|.|..|... .++.|.|
T Consensus 150 ~~~~~------~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 150 TAPGH------GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SSTTS------SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCc------CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 54322 235689999987 89999999999999886 7888877
No 60
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.94 E-value=9.1e-25 Score=174.25 Aligned_cols=184 Identities=27% Similarity=0.430 Sum_probs=119.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEccc-ccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHV-TVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~-~~~D~G~Y~C 80 (286)
||.|...+.++.+.+|+++.|.|.+.|.|.+.+.|++++..+......... . .......|.|.++ +.+|+|.|+|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~---~-~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIE---F-DDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEE---E-GGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEE---E-cCCCceEEEEeccCCCCCCeEEEE
Confidence 799999999999999999999999999999999999999998754332210 1 1111234677777 4777777777
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC-----
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL----- 155 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~----- 155 (286)
.|.|..|.... .+.|.|...
T Consensus 82 ~a~n~~g~~~~-------------------------------------------------------~~~l~V~~~~~~~~ 106 (212)
T 2yd6_A 82 VASNNVGEISV-------------------------------------------------------STRLTVLREDQIPR 106 (212)
T ss_dssp EEEETTEEEEE-------------------------------------------------------EEEEEEECGGGCCT
T ss_pred EEEcCCCcEEE-------------------------------------------------------EEEEEEeccCccCC
Confidence 77776554321 222222211
Q ss_pred --CceecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCC
Q psy15667 156 --PYVRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDG 232 (286)
Q Consensus 156 --~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g 232 (286)
|.+... .... +.+|+.+.|.|.+. |.|.+.+.|+|+|
T Consensus 107 ~~p~~~~~~~~~~---------------------------------------~~~g~~v~l~C~~~-g~p~p~v~W~~~g 146 (212)
T 2yd6_A 107 GFPTIDMGPQLKV---------------------------------------VERTRTATMLCAAS-GNPDPEITWFKDF 146 (212)
T ss_dssp TCCEEEECCCCEE---------------------------------------EETTSCEEEEEEEE-CSSCCEEEEEETT
T ss_pred CcceeecCCccee---------------------------------------EecCCCEEEEEEec-CCCCCeEEEEECC
Confidence 111111 1122 23455555555553 5677788999999
Q ss_pred eeCCCC---CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccccee-eEEEEEE
Q psy15667 233 KPLSPR---FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQV 285 (286)
Q Consensus 233 ~~~~~~---~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~L~V 285 (286)
..+... .++.... ......|.|.++..+|+|.|+|.|.|.+|... ..+.|.|
T Consensus 147 ~~l~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~ 202 (212)
T 2yd6_A 147 LPVDTSNNNGRIKQLR-SESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYV 202 (212)
T ss_dssp EEC------CCEEEEE-ETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccccCcCCCceEEEEe-cCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEE
Confidence 888643 2222222 12357899999999999999999999999764 4455554
No 61
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=1.7e-25 Score=189.88 Aligned_cols=238 Identities=18% Similarity=0.237 Sum_probs=146.9
Q ss_pred CCCeeEeccccccccCC--CcEEEEEEeecC-C-CCeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCC
Q psy15667 1 TPPILTYSFIEQTLQPG--PAVSLKCIASGN-P-TPDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVED 74 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G--~~~~l~C~~~g~-p-~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D 74 (286)
.||.+.+.+.......| +.++|.|.+.|. | .+.|+|+|||..|..+..... .. ...+. ....|.|..+..+|
T Consensus 6 ~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~-~~-~~~g~~~~~s~l~i~~~~~~d 83 (323)
T 2wqr_A 6 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTAS-TT-QEGELASTQSELTLSQKHWLS 83 (323)
T ss_dssp CCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEE-EE-EETTEEEEEEEEEEEHHHHHT
T ss_pred CCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCC-cC-ccCCcEEEEEEEEEcHHHcCC
Confidence 36777776655544444 699999999986 4 479999999999875432111 00 11111 12357888888899
Q ss_pred CeEEEEEEEcCCEEEEEe-----------------c------------------CCCCC-e---eEEEeeCC-ccCcCC-
Q psy15667 75 GGEYACVAENRAGTCEIT-----------------P------------------YDSGP-Y---LIAWFKDG-RQIPGR- 113 (286)
Q Consensus 75 ~G~Y~C~a~n~~g~~~~~-----------------~------------------~~~~~-~---~~~W~~~g-~~l~~~- 113 (286)
+|.|+|+|.|..+..... + .+..| + .+.|+|++ ..+...
T Consensus 84 ~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~ 163 (323)
T 2wqr_A 84 DRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST 163 (323)
T ss_dssp TCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC
T ss_pred CCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc
Confidence 999999999987654311 0 00112 3 89999964 544321
Q ss_pred ------C-----CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeec
Q psy15667 114 ------T-----SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYP 182 (286)
Q Consensus 114 ------~-----~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p 182 (286)
. ....|.|.++..+|+|.|+|.|.|..+.. ...+.|.........+.+.+
T Consensus 164 ~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~---~~~~~v~~~~~~~~~P~v~~---------------- 224 (323)
T 2wqr_A 164 RKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPR---ALMRSTTKTSGPRAAPEVYA---------------- 224 (323)
T ss_dssp CEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS---CEEEEECCCCSCCBCCEEEE----------------
T ss_pred CCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCC---CeeeEEEccCCCCCCCEEEE----------------
Confidence 0 12369999999999999999999976422 22333321100000111100
Q ss_pred CCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCceee----ecC---CCeeeEE
Q psy15667 183 IEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVS----DLD---SFSSLLS 254 (286)
Q Consensus 183 ~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~----~~~---~~~~~L~ 254 (286)
.. .+...+ .|+.+.|.|.+....|+ +.+.|+|+|..+.... +... ..+ ...+.|.
T Consensus 225 ------~~---------~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~ 287 (323)
T 2wqr_A 225 ------FA---------TPEWPG-SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLE 287 (323)
T ss_dssp ------EE---------CCCCTT-CTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEE
T ss_pred ------eC---------CChHHh-cCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEE
Confidence 00 001112 37788888877643444 4899999999875431 1110 000 1135799
Q ss_pred EcccCCCCCeEEEEEEEecccc
Q psy15667 255 INSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 255 i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
|..+..+|+|.|+|.|.|..+.
T Consensus 288 i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 288 VTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEHHHHHHCCCEEEEEECTTST
T ss_pred EChHHccCCCEEEEEEEeCCCC
Confidence 9999999999999999999876
No 62
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=4.6e-25 Score=195.22 Aligned_cols=263 Identities=16% Similarity=0.228 Sum_probs=163.5
Q ss_pred eccccccccCCCcEEEEEEeecCC--CCeeEEeeC--CEEcC-----------------CCCeeEeceEEecccceeEEE
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD--GFELP-----------------TNNRFVIGQFVSGHGDVISHV 65 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~--~~~l~-----------------~~~~~~~~~~~~~~~~~~~~l 65 (286)
..+..+++.+|++++|.|.+.+.+ .+.+.|+|+ +..+. ...|+.+.. . .......|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~--~-~~~~~~~L 81 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISR--D-NAKNTLYL 81 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEE--E-TTTTEEEE
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEE--e-CCCCeEEE
Confidence 345667899999999999998874 678999985 32210 123443311 1 11112369
Q ss_pred EEcccccCCCeEEEEEEEcCCEE---------EEEe------c-------C----------------C-CCC-eeEEEee
Q psy15667 66 NISHVTVEDGGEYACVAENRAGT---------CEIT------P-------Y----------------D-SGP-YLIAWFK 105 (286)
Q Consensus 66 ~I~~~~~~D~G~Y~C~a~n~~g~---------~~~~------~-------~----------------~-~~~-~~~~W~~ 105 (286)
.|.+++.+|+|.|.|.|.|..+. ..+. | . + .++ ..+.|+|
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 161 (444)
T 1igt_B 82 QMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 161 (444)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGG
T ss_pred EECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEec
Confidence 99999999999999999986421 1111 0 0 0 012 3899999
Q ss_pred CCccCcC---C-----C---CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE------------------cCCC
Q psy15667 106 DGRQIPG---R-----T---SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL------------------GGLP 156 (286)
Q Consensus 106 ~g~~l~~---~-----~---~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v------------------~~~~ 156 (286)
++..+.. . . ....|.|.++..+| |.|+|.|.|..+... ....+.+ ...|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~p 239 (444)
T 1igt_B 162 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK-VDKKIEPRGPTIKPCPPCKCPAPNLLGGP 239 (444)
T ss_dssp GTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEE-EEEECCCCCCSCCCCCCCSCCCSCCCCCC
T ss_pred CCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcc-eEEEeccCCCCcccCCccccCCcccCCCc
Confidence 9876421 0 0 12458899999999 999999999987642 2233322 1123
Q ss_pred ce-ecCCceE--EecCCCEEEEeeEeeec----CCeEEEEEcCCccc-------------------c-------------
Q psy15667 157 YV-RLIPKVT--AIDGEGLSIKCPVAGYP----IEEVHWEKVPPKIE-------------------S------------- 197 (286)
Q Consensus 157 ~~-~~~~~~~--~~~g~~~~l~c~~~~~p----~~~v~w~~~~~~~~-------------------~------------- 197 (286)
.+ ...+... +..|+.++|.|.+.|.| .+.+.|.+....+. .
T Consensus 240 ~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~ 319 (444)
T 1igt_B 240 SVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKE 319 (444)
T ss_dssp EEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCE
T ss_pred eEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCc
Confidence 33 2222222 36899999999999984 35899987321110 0
Q ss_pred --cc----------------------cc--------cCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceee
Q psy15667 198 --FA----------------------FP--------FDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVS 244 (286)
Q Consensus 198 --~~----------------------~~--------~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~ 244 (286)
|. .+ ...+ .++.+.|.|.+....|++ .+.|+|+|..+.........
T Consensus 320 Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 398 (444)
T 1igt_B 320 FKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEM-TKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPV 398 (444)
T ss_dssp EEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGT-TSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCE
T ss_pred EEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHc-cCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccce
Confidence 00 00 0012 344599999987646665 99999999987432111111
Q ss_pred ec-CC---CeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 245 DL-DS---FSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 245 ~~-~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.. ++ ....|.|.....+|.|.|+|.|.|..-
T Consensus 399 ~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 399 LDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred eCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 11 11 123567777777889999999999863
No 63
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=3.3e-24 Score=167.91 Aligned_cols=178 Identities=22% Similarity=0.316 Sum_probs=117.8
Q ss_pred CCCeeEeccccccccC-CCcEEEEEEeecCCC--CeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 1 TPPILTYSFIEQTLQP-GPAVSLKCIASGNPT--PDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~-G~~~~l~C~~~g~p~--p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
.||.|.. +.+.++.+ |++++|.|.+.+.|. +.+.|++++..+..+.... . ...|.|.+++.+|+|.
T Consensus 2 ~~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~--------~--~~~L~i~~~~~~d~G~ 70 (190)
T 2wv3_A 2 NEPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA--------S--NMEYRINKPRAEDSGE 70 (190)
T ss_dssp -CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC--------S--EEEEEESSCCGGGCEE
T ss_pred CCCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe--------c--cEEEEEecCCcccCEE
Confidence 3788886 55566666 999999999999887 8899999999887544321 1 1247788888888888
Q ss_pred EEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCc
Q psy15667 78 YACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPY 157 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~ 157 (286)
|+|.|.|. +.. ...+.|.|...|.
T Consensus 71 Y~C~~~n~-~~~-------------------------------------------------------~~~~~l~V~~~p~ 94 (190)
T 2wv3_A 71 YHCVYHFV-SAP-------------------------------------------------------KANATIEVKAAPD 94 (190)
T ss_dssp EEEEEEET-TEE-------------------------------------------------------EEEEEEEEECCCE
T ss_pred EEEEEEeC-Ccc-------------------------------------------------------cccEEEEEecCCc
Confidence 88877764 222 1123344433333
Q ss_pred eecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe--CCee
Q psy15667 158 VRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK--DGKP 234 (286)
Q Consensus 158 ~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~--~g~~ 234 (286)
+... ....+..|+.+.|.|.+. |.|.+.+.|+| +|..
T Consensus 95 ~~~~~~~~~~~~g~~v~l~C~~~----------------------------------------g~p~p~i~W~~~~~g~~ 134 (190)
T 2wv3_A 95 ITGHKRSENKNEGQDAMMYCKSV----------------------------------------GYPHPEWMWRKKENGVF 134 (190)
T ss_dssp EEEECSEEEEETTSCEEEEEEEE----------------------------------------CSSCCEEEEEEEETTEE
T ss_pred ccccCCcceeeCCCcEEEEEEeC----------------------------------------ccCCCceEEEEcCCCce
Confidence 3221 123344555555555554 44555667777 5654
Q ss_pred CC---CCCCceeeecCCCeeeEEEcccC-CCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 235 LS---PRFPVNVSDLDSFSSLLSINSVS-AAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 235 ~~---~~~~~~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
+. ...++.+.. ......|.|.++. .+|+|.|+|.|.|..|....++.|.|+
T Consensus 135 ~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 135 EEISNSSGRFFIIN-KENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECCCTTSCEEEEE-CSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eeeecCCCeEEEec-CCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 42 223333332 2234589999999 799999999999999999999999884
No 64
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.93 E-value=1.7e-24 Score=168.21 Aligned_cols=178 Identities=23% Similarity=0.430 Sum_probs=113.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+....++.+.. ........|.|.+++.+|+|.|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C- 77 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPV---SEQHWIGFLSLKSVERSDAGRYWC- 77 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEE---ETTEEEEEEEESSCCGGGCEEEEE-
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEe---cCCCceEEEEEeecCcccCeEEEE-
Confidence 6889999999999999999999999999999999999999887654432210 001111234455555555555555
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI 161 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~ 161 (286)
.+.|..+......+.|.|..+|.+...
T Consensus 78 -----------------------------------------------------~~~~~~~~~~~~~~~l~V~~~p~~~~~ 104 (182)
T 1rhf_A 78 -----------------------------------------------------QVEDGGETEISQPVWLTVEGVPFFTVE 104 (182)
T ss_dssp -----------------------------------------------------EESSCTTCEECCCEEEEEECSCEEEEC
T ss_pred -----------------------------------------------------EEEcCCCcEEEEEEEEEEecCCeEEec
Confidence 444443332233455555554443222
Q ss_pred C-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCC
Q psy15667 162 P-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRF 239 (286)
Q Consensus 162 ~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~ 239 (286)
+ ... +.+|+.+.|.|.+. +.|.| .+.|+|++..+....
T Consensus 105 ~~~~~---------------------------------------~~~g~~~~l~C~~~-g~p~p~~v~W~~~~~~~~~~~ 144 (182)
T 1rhf_A 105 PKDLA---------------------------------------VPPNAPFQLSCEAV-GPPEPVTIVWWRGTTKIGGPA 144 (182)
T ss_dssp CCCEE---------------------------------------ECTTCCEEEEEEEE-CSSSCCEEEEEETTEECSCSE
T ss_pred CcceE---------------------------------------ecCCCEEEEEeEec-CCCCCCEEEEEcCCeECCCCC
Confidence 1 122 33455555555553 55666 889999998775431
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccccee-eEEEEEEC
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKLQVK 286 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~L~V~ 286 (286)
. ....|.|.++ +|+|.|+|.|.|..|... .++.|.|+
T Consensus 145 ~--------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 145 P--------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp E--------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred C--------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 1 2567899988 699999999999999886 48899886
No 65
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.93 E-value=2.8e-24 Score=168.27 Aligned_cols=186 Identities=20% Similarity=0.359 Sum_probs=118.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCC-CCeeEEee-CCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNP-TPDIGWTL-DGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-~p~v~W~~-~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+|+.|...+.++.+.+|++++|.|.+.+.| .+.+.|++ ||..+.. ..++.+.. .......|.|.+++.+|+|.
T Consensus 1 rp~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~ 76 (191)
T 1epf_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVW----NDDDSSTLTIYNANIDDAGI 76 (191)
T ss_dssp --CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEE----EETTEEEEEECSCCGGGCEE
T ss_pred CceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEE----CCCCceEEEEccCCcccCEE
Confidence 589999999999999999999999999977 89999999 8877763 33433211 00111235566666666666
Q ss_pred EEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCc
Q psy15667 78 YACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPY 157 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~ 157 (286)
|+|.+.|.. +......+.|.+...|.
T Consensus 77 Y~C~~~~~~------------------------------------------------------~~~~~~~~~l~v~~~p~ 102 (191)
T 1epf_A 77 YKCVVTAED------------------------------------------------------GTQSEATVNVKIFQKLM 102 (191)
T ss_dssp EEEEEEETT------------------------------------------------------TEEEEEEEEEEEECCSE
T ss_pred EEEEEEcCC------------------------------------------------------CcceEEEEEEEeecCce
Confidence 666655543 21112234444443333
Q ss_pred eecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 158 VRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 158 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
+...+. ...+.+|+.+.|.|.+. |.|.+.+.|+|++..+..
T Consensus 103 ~~~~~~--------------------------------------~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~~ 143 (191)
T 1epf_A 103 FKNAPT--------------------------------------PQEFKEGEDAVIVCDVV-SSLPPTIIWKHKGRDVIL 143 (191)
T ss_dssp EEECCS--------------------------------------SEECCTTSCEEECCEEE-CSSCCEEEEEETTEEGGG
T ss_pred EecCCC--------------------------------------cEeecCCCeEEEEEEEC-CCCCCEEEEEECCEEeec
Confidence 222111 11244566666666654 667788899999988753
Q ss_pred CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 238 RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.....+.... ++.|.|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 144 ~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 144 KKDVRFIVLS--NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp GCCTTEEECT--TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred cCCceEEEec--CCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 3222222211 347999999999999999999999976666555554
No 66
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.6e-24 Score=169.12 Aligned_cols=184 Identities=21% Similarity=0.385 Sum_probs=117.9
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
.+|.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.. +.++... .++ .|.|.+++.+|+|.|
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~----~L~i~~~~~~d~G~Y 72 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----ANN----NLQILNINKSDEGIY 72 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEEC----TTS----CEEETTCCGGGCEEE
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEe----cCC----CEEEeeCCHhHCcEE
Confidence 489999999999999999999999999999999999999887652 3333221 111 266777777777777
Q ss_pred EEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce
Q psy15667 79 ACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV 158 (286)
Q Consensus 79 ~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~ 158 (286)
+|.+.|..+. ........+.+...|.+
T Consensus 73 ~C~~~~~~~~-----------------------------------------------------~~~~~~~~l~v~~~p~~ 99 (189)
T 2v5t_A 73 RCEGRVEARG-----------------------------------------------------EIDFRDIIVIVNVPPAI 99 (189)
T ss_dssp EEEEEETTTT-----------------------------------------------------EEEEEEEEEEEEEEEEE
T ss_pred EEEEEEcCCC-----------------------------------------------------ceEEEEEEEEecCCCCc
Confidence 7766553210 00011122222222211
Q ss_pred ecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC
Q psy15667 159 RLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 238 (286)
Q Consensus 159 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~ 238 (286)
...+... ...+.+|+.+.|.|.+. |.|.+.+.|+|+|..+...
T Consensus 100 ~~~~~~~------------------------------------~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~g~~~~~~ 142 (189)
T 2v5t_A 100 SMPQKSF------------------------------------NATAERGEEMTFSCRAS-GSPEPAISWFRNGKLIEEN 142 (189)
T ss_dssp ECSCCEE------------------------------------EEETTSCCCEEEECEEE-EESCCEEEEEETTEECCCS
T ss_pred ccccccc------------------------------------cccccCCCcEEEEEEEc-cCCCCeEEEEECCEECcCC
Confidence 1111100 01134556666666553 4566788999999988766
Q ss_pred CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 239 FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 239 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+..+.. ....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 143 ~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 143 EKYILKG---SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp SSEEEET---TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEec---CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 5544332 2457999999999999999999999999999988876
No 67
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=6.3e-25 Score=172.01 Aligned_cols=180 Identities=26% Similarity=0.482 Sum_probs=121.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+.. +.++.+. .++. .|.|.+++.+|+|.|+|
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~----~~~~---~L~i~~~~~~d~G~Y~C 79 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIR----ENGQ---LLTILSVEDSDDGIYCC 79 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEE----GGGT---EEEESSCCGGGCEEEEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEc----CCcc---EEEEcCCCcccCeEEEE
Confidence 68888888888999999999999999999999999999988864 3444321 1221 36677777777777777
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.+.|..|. .......|.|...|.+..
T Consensus 80 ~~~~~~~~------------------------------------------------------~~~~~~~l~v~~~p~~~~ 105 (192)
T 2iep_A 80 TANNGVGG------------------------------------------------------AVESCGALQVKMKPKITR 105 (192)
T ss_dssp EEECSSSC------------------------------------------------------CEEEEEEEEEEEEEEEEE
T ss_pred EEEcCCCc------------------------------------------------------eeEeEEEEEEEeCCcccc
Confidence 77664322 111122233322222221
Q ss_pred C-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC
Q psy15667 161 I-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 239 (286)
Q Consensus 161 ~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~ 239 (286)
. ....+..|+.+.|.|.+.+ .|.+.+.|+|++..+....
T Consensus 106 ~~~~~~~~~g~~~~l~C~~~g----------------------------------------~p~~~v~W~~~~~~~~~~~ 145 (192)
T 2iep_A 106 PPINVKIIEGLKAVLPCTTMG----------------------------------------NPKPSVSWIKGDSALRENS 145 (192)
T ss_dssp CCCCEEEETTSCEEECCEEEE----------------------------------------ESCCEEEEEETTEECCCCS
T ss_pred CCcceEEeCCCcEEEEEEEec----------------------------------------cCCceEEEEeCCEEccCCC
Confidence 1 1234455666666665544 4455778888888876655
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccce-eeEEEEEEC
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVK 286 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~-~~~~~L~V~ 286 (286)
++.+.. .+.|.|.++..+|+|.|+|.|.|..|.. +.++.|.|+
T Consensus 146 ~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 146 RIAVLE----SGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp SEEECT----TSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred cEEEec----CCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 443322 3479999999999999999999999987 446777763
No 68
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.93 E-value=1.7e-24 Score=173.02 Aligned_cols=186 Identities=27% Similarity=0.445 Sum_probs=115.9
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.+..+.+|++++|.|.+.|.|.+.+.|+++|..+........ ......+.....|.|.+++.+|+|.|+|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~-~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSH-RVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSS-EEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccce-eEEecCCceEEEEEeccCCcccCceEEE
Confidence 489999999999999999999999999999999999999998865321100 0001122222223456666666666666
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC-Ccee
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL-PYVR 159 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~-~~~~ 159 (286)
.+.|..|.. ......|.|... +.+.
T Consensus 87 ~~~n~~g~~------------------------------------------------------~~~~~~l~v~~~~~~~~ 112 (217)
T 2vr9_A 87 VAKNRVGQA------------------------------------------------------VSRHASLQIAVLRDDFR 112 (217)
T ss_dssp EEEETTEEE------------------------------------------------------ECCCEEEEECEECCSCS
T ss_pred EEecCCCcc------------------------------------------------------ccccceEEEEEeCCCcE
Confidence 666654432 111222322211 1111
Q ss_pred c-CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC
Q psy15667 160 L-IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 238 (286)
Q Consensus 160 ~-~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~ 238 (286)
. .....+ .+|+.+.|.|.+..+.|.+.+.|+|+|..+...
T Consensus 113 ~~~~~~~~---------------------------------------~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~ 153 (217)
T 2vr9_A 113 VEPKDTRV---------------------------------------AKGETALLECGPPKGIPEPTLIWIKDGVPLDDL 153 (217)
T ss_dssp BCCCCEEE---------------------------------------CTTSCEEECCBCCCEESCCEEEEEETTEEECCC
T ss_pred ECCCccEE---------------------------------------cCCCeEEEEEECCCCCCCCeEEEEECCcCCCcc
Confidence 1 112223 345555555554345666778888888777532
Q ss_pred C--------CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 239 F--------PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 239 ~--------~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
. +..+. ..+.|.|.++..+|+|.|+|.|.|..|....+..+.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~l 203 (217)
T 2vr9_A 154 KAMSFGASSRVRIV----DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKL 203 (217)
T ss_dssp CCC---CCCSEEEE----TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred cccccccCCcEEec----CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEE
Confidence 1 22111 134799999999999999999999999887765543
No 69
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.93 E-value=1.1e-24 Score=193.51 Aligned_cols=265 Identities=17% Similarity=0.277 Sum_probs=163.1
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeC--CEE---c--------------CCCCeeEeceEEecccceeEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD--GFE---L--------------PTNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~--~~~---l--------------~~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
.+..+++.+|++++|.|.+.+.| .+.+.|+|+ +.. + ....|+.+.. .. ......|.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~--~~-~~~~~~L~ 82 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTA--DT-SANTAYME 82 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEE--ET-TTTEEEEE
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEE--eC-CCCEEEEE
Confidence 45567899999999999999876 788999984 221 1 0123443211 11 11224699
Q ss_pred EcccccCCCeEEEEEEEcCCE------------------EEEEe------c-----------------------CCC-C-
Q psy15667 67 ISHVTVEDGGEYACVAENRAG------------------TCEIT------P-----------------------YDS-G- 97 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~~g------------------~~~~~------~-----------------------~~~-~- 97 (286)
|.+++.+|+|.|+|.|.|..| ...+. | .+. +
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 83 LRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp ECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred ECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 999999999999999988643 11111 0 001 1
Q ss_pred CeeEEEeeCCccCcC------CCC------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEc------------
Q psy15667 98 PYLIAWFKDGRQIPG------RTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG------------ 153 (286)
Q Consensus 98 ~~~~~W~~~g~~l~~------~~~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~------------ 153 (286)
++.+.|+|++..+.. ... ...|.|.++..+| |.|+|.+.|..+... ....+.+.
T Consensus 163 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~~~~~~~ 240 (457)
T 1hzh_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKAEPKSCDKTHTCPPCP 240 (457)
T ss_dssp CCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEE-EEEECCCCCSCSSCSCCSCC
T ss_pred CeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcc-eeEEecccCCCcccccCCCC
Confidence 257999999975421 001 1368999999999 999999999766532 22233321
Q ss_pred -----CCCce-ecCCceE--EecCCCEEEEeeEeeecCC----eEEEEEcCCccc-------------------------
Q psy15667 154 -----GLPYV-RLIPKVT--AIDGEGLSIKCPVAGYPIE----EVHWEKVPPKIE------------------------- 196 (286)
Q Consensus 154 -----~~~~~-~~~~~~~--~~~g~~~~l~c~~~~~p~~----~v~w~~~~~~~~------------------------- 196 (286)
..|.+ ...+... +..|+.+.|.|.+.|.|++ .+.|.+....+.
T Consensus 241 ~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~ 320 (457)
T 1hzh_H 241 APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLH 320 (457)
T ss_dssp CCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCH
T ss_pred CccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECH
Confidence 12322 1122211 4579999999999998653 899987431110
Q ss_pred -----c----cc-------------c---------c--------cCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCC
Q psy15667 197 -----S----FA-------------F---------P--------FDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLS 236 (286)
Q Consensus 197 -----~----~~-------------~---------~--------~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~ 236 (286)
. |. . + ...+. ++.+.|.|.+....|+ +.+.|+|+|..+.
T Consensus 321 ~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~-~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 399 (457)
T 1hzh_H 321 QDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELT-KNQVSLTCLVKGFYPSDIAVEWESNGQPEN 399 (457)
T ss_dssp HHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGG-SSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred HHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccC-CCcEEEEEEEEeEECCCCEEEEEECCEECc
Confidence 0 00 0 0 00122 3449999998754444 5999999999885
Q ss_pred CCCCceeeec-CC---CeeeEEEcccCCCCCeEEEEEEEeccccee
Q psy15667 237 PRFPVNVSDL-DS---FSSLLSINSVSAAHSGEYTCVASNTAAQAR 278 (286)
Q Consensus 237 ~~~~~~~~~~-~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 278 (286)
......+... ++ ....|.|.....+|+|.|+|.|.|......
T Consensus 400 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~~~ 445 (457)
T 1hzh_H 400 NYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNH 445 (457)
T ss_dssp CEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSGGG
T ss_pred ceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCCCCc
Confidence 4321111111 11 123466666666889999999999865443
No 70
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.92 E-value=2.3e-23 Score=162.77 Aligned_cols=178 Identities=22% Similarity=0.388 Sum_probs=111.6
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
.|...+.++.+.+|++++|.|.+.+.|. .+.|++ ++..+....++.+.. .+ ....|.|.+++.+|+|.|+|.+
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~----~~-~~~~L~i~~~~~~d~G~Y~C~~ 77 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQK----EG-VRSRLTIYNANIEDAGIYRCQA 77 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEE----ET-TEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEEC----CC-CeEEEEEccCCcccCeEEEEEE
Confidence 4677788889999999999999999988 899999 777776655554321 11 1124566666666666666666
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC-
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI- 161 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~- 161 (286)
.|.. |......+.|.|...|.+...
T Consensus 78 ~~~~------------------------------------------------------g~~~~~~~~l~v~~~p~~~~~~ 103 (189)
T 2v44_A 78 TDAK------------------------------------------------------GQTQEATVVLEIYQKLTFREVV 103 (189)
T ss_dssp ECTT------------------------------------------------------SCEEEEEEEEEEECCCEEESCC
T ss_pred EeCC------------------------------------------------------CCcEEEEEEEEEecCCceeecC
Confidence 5533 322223344555444433221
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC--CC
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP--RF 239 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~--~~ 239 (286)
....+..|+.+.|.|.+. |.|.+.+.|+|++..+.. ..
T Consensus 104 ~~~~~~~g~~~~l~C~~~----------------------------------------g~p~p~v~W~~~~~~~~~~~~~ 143 (189)
T 2v44_A 104 SPQEFKQGEDAEVVCRVS----------------------------------------SSPAPAVSWLYHNEEVTTISDN 143 (189)
T ss_dssp CSEEEETTSCEEECCEEE----------------------------------------CSSCCEEEEEEEC--CEECCCT
T ss_pred CcEEEeCCCCEEEEEEEC----------------------------------------cCCCCcEEEEECCcEEeccCCC
Confidence 223344455555555443 456667788888876642 22
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
++.+. ..+.|.|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 144 ~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 144 RFAML----ANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp TEEEC----TTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred CEEEe----cCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 22222 1347999999999999999999999976665544443
No 71
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.92 E-value=3.1e-24 Score=170.43 Aligned_cols=164 Identities=17% Similarity=0.232 Sum_probs=115.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCe-eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPD-IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~-v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.|.|...+.+..+.+|++++|.|.+.+.|.+. +.|++||..+.... ..|.|.+++.+|+|.|+|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~---------------~~L~i~~v~~~D~G~Y~C 71 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA---------------SSYFIDAATVDDSGEYRC 71 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS---------------SEEEESSCCGGGCEEEEE
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc---------------cEEEEecccccCCEEEEE
Confidence 47788888888999999999999999998876 99999998876432 137789999999999999
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.|.|... +..+.|.|...+.+..
T Consensus 72 ~a~n~~~---------------------------------------------------------s~~~~l~V~~~p~~~~ 94 (204)
T 3sgj_C 72 QTQLSTL---------------------------------------------------------SDPVQLEVHIGWLLLQ 94 (204)
T ss_dssp EETTSBC---------------------------------------------------------CCCEEEEEECSSEEEE
T ss_pred EeCCCcc---------------------------------------------------------cccEEEEEecCceEec
Confidence 8765210 0112233322222111
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.+... +.+|+.+.|.|.+..+.|.+.+.|+|+|..+...
T Consensus 95 ~~~~~---------------------------------------v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-- 133 (204)
T 3sgj_C 95 APRWV---------------------------------------FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-- 133 (204)
T ss_dssp CSCSE---------------------------------------EETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE--
T ss_pred CCcee---------------------------------------EeCCCcEEEEEEecCCCCCceEEEEECCcEeecc--
Confidence 11222 3345556666655555667889999999875211
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEe-cccceeeEEEEEE
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASN-TAAQARYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N-~~g~~~~~~~L~V 285 (286)
. ....|.|.++..+|+|.|+|.|.| ..+..+..+.|.|
T Consensus 134 ----~---~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V 172 (204)
T 3sgj_C 134 ----H---HNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITI 172 (204)
T ss_dssp ----E---ECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ----c---CCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEE
Confidence 1 145799999999999999999999 5566667777776
No 72
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.92 E-value=2.7e-23 Score=165.22 Aligned_cols=190 Identities=22% Similarity=0.323 Sum_probs=117.8
Q ss_pred CCCcEEEEEEeec-CCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEEEecC
Q psy15667 16 PGPAVSLKCIASG-NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCEITPY 94 (286)
Q Consensus 16 ~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 94 (286)
.|+.+.|.|.+.+ +|.+.+.|+++|..+..+.++.+.. .+. ...|.|.+++.+|+|.|+|.|.|..|.......
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~----~~~-~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 90 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGV----TGE-QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVD 90 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEE----ETT-EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEE----eCC-EEEEEECCCCcccCEEEEEEEecCCcceEEEEE
Confidence 5677788888777 4689999999999998777765421 122 235889999999999999998887665432100
Q ss_pred CCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCc-eecCC-ceEEecCCCE
Q psy15667 95 DSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPY-VRLIP-KVTAIDGEGL 172 (286)
Q Consensus 95 ~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~-~~~~~-~~~~~~g~~~ 172 (286)
+. ...... ....+ ... . ...+.....|. +...+ ...+
T Consensus 91 ------l~----v~~~~~----~~~~~-------------------~~~-~-~~~~~~~~~p~~~~~~~~~~~v------ 129 (212)
T 2r15_A 91 ------LS----GQAYDE----AYAEF-------------------QRL-K-QAAIAEKNRARVLGGLPDVVTI------ 129 (212)
T ss_dssp ------EC----HHHHHH----HHHHH-------------------HHH-H-HHHHHHHHSCEEEEBCCSEEEE------
T ss_pred ------EE----Eeeccc----hhhhc-------------------ccc-C-cccccccCCCcccccCCCcEEE------
Confidence 00 000000 00000 000 0 00000000010 00011 1223
Q ss_pred EEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeee
Q psy15667 173 SIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSL 252 (286)
Q Consensus 173 ~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 252 (286)
.+|+.+.|.|.+. |.|.|.+.|+|+|..+....++.+.........
T Consensus 130 ---------------------------------~~g~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~ 175 (212)
T 2r15_A 130 ---------------------------------QEGKALNLTCNVW-GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAY 175 (212)
T ss_dssp ---------------------------------ETTCCEEEEEEEE-CSSCCEEEEEETTEEECCCSSEEEEEETTTEEE
T ss_pred ---------------------------------ccCCeEEEEEEEc-CCCCceEEEEECCeECccCCCEEEEEcCCCEEE
Confidence 3455555555543 567778899999998877666666554344568
Q ss_pred EEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 253 LSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 253 L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 176 L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 208 (212)
T 2r15_A 176 FTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208 (212)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEE
Confidence 999999999999999999999999999998887
No 73
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.92 E-value=9.3e-23 Score=182.02 Aligned_cols=266 Identities=17% Similarity=0.320 Sum_probs=164.5
Q ss_pred eccccccccCCCcEEEEEEeecCC--CCeeEEeeCC--EEcC-----------------CCCeeEeceEEecccceeEEE
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG--FELP-----------------TNNRFVIGQFVSGHGDVISHV 65 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~--~~l~-----------------~~~~~~~~~~~~~~~~~~~~l 65 (286)
..+..+++.+|++++|.|.+.+.+ .+.+.|+|+. ..+. ...|+.... ........|
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~---~~~~~~~~L 82 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTR---DTSATTAYM 82 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEE---cCCCCeEEE
Confidence 356677899999999999998765 6789999853 2110 123433211 001122369
Q ss_pred EEcccccCCCeEEEEEEEcCCE------------EEEEe------c----------------------CCCCC---eeEE
Q psy15667 66 NISHVTVEDGGEYACVAENRAG------------TCEIT------P----------------------YDSGP---YLIA 102 (286)
Q Consensus 66 ~I~~~~~~D~G~Y~C~a~n~~g------------~~~~~------~----------------------~~~~~---~~~~ 102 (286)
.|.+++.+|+|.|.|.+.|..| ...+. | .+..| ..+.
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~ 162 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVT 162 (475)
T ss_pred EECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEE
Confidence 9999999999999999988643 01111 0 00112 3899
Q ss_pred EeeCCccCcCC-------CC------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEc----------------
Q psy15667 103 WFKDGRQIPGR-------TS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG---------------- 153 (286)
Q Consensus 103 W~~~g~~l~~~-------~~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~---------------- 153 (286)
|++++...... .. ...|.|.++..+|+|.|+|.|.|..+......+.+.|.
T Consensus 163 W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~ 242 (475)
T 1iga_A 163 WSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSP 242 (475)
T ss_pred EcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCC
Confidence 99998643210 01 13578888889999999999999876422222332221
Q ss_pred --CCCceec-CCc-eEEecCCCEEEEeeEeeecC---CeEEEEEcCCccc------------------c-----------
Q psy15667 154 --GLPYVRL-IPK-VTAIDGEGLSIKCPVAGYPI---EEVHWEKVPPKIE------------------S----------- 197 (286)
Q Consensus 154 --~~~~~~~-~~~-~~~~~g~~~~l~c~~~~~p~---~~v~w~~~~~~~~------------------~----------- 197 (286)
..|.+.. .+. ..+..|+.+.|.|.+.|.++ +.+.| ....... .
T Consensus 243 ~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~ 321 (475)
T 1iga_A 243 SCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHG 321 (475)
T ss_pred CCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccC
Confidence 1222212 222 22468999999999998754 58999 3211000 0
Q ss_pred -------------------c-----cc-c------c--CCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCcee
Q psy15667 198 -------------------F-----AF-P------F--DGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNV 243 (286)
Q Consensus 198 -------------------~-----~~-~------~--~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~ 243 (286)
. .. + . ..+.+|+.+.|.|.+....| .+.+.|+|+|..+........
T Consensus 322 G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 401 (475)
T 1iga_A 322 KTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTW 401 (475)
T ss_pred CcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeec
Confidence 0 00 0 0 11356888999999875444 369999999998865421100
Q ss_pred --eec----C---CCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 244 --SDL----D---SFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 244 --~~~----~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
... + .....|.|.....+|.|.|+|.|.|....
T Consensus 402 ~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 402 ASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred ccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 000 0 01346778888888999999999998654
No 74
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.92 E-value=8.6e-25 Score=192.98 Aligned_cols=264 Identities=17% Similarity=0.255 Sum_probs=163.3
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeCC--EEc----C-------------CCCeeEeceEEecccceeEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG--FEL----P-------------TNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~--~~l----~-------------~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
.+..+++.+|++++|.|.+.+.+ .+.|.|+|++ ..+ . ...|+.+.. .. ......|.
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~--~~-~~~~~~L~ 81 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTR--DR-SSNTANIH 81 (434)
T ss_dssp CCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCB--CG-GGCBBCEE
T ss_pred CCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEE--EC-CCCEEEEE
Confidence 45667899999999999999864 6789999863 221 0 023443211 00 01123589
Q ss_pred EcccccCCCeEEEEEEEcCCE------EEEEe------c-----------------------CCC-CCe-eEEEeeCCcc
Q psy15667 67 ISHVTVEDGGEYACVAENRAG------TCEIT------P-----------------------YDS-GPY-LIAWFKDGRQ 109 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~~g------~~~~~------~-----------------------~~~-~~~-~~~W~~~g~~ 109 (286)
|.+++.+|+|.|+|.|.|..+ ...+. | .+. +.+ .+.|+|++..
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~ 161 (434)
T 1igy_B 82 LSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 161 (434)
T ss_dssp ECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBC
T ss_pred ECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcC
Confidence 999999999999999987422 11111 0 000 122 8999999876
Q ss_pred CcC--------CC---CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC------------CCceec-CCceE
Q psy15667 110 IPG--------RT---SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG------------LPYVRL-IPKVT 165 (286)
Q Consensus 110 l~~--------~~---~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~------------~~~~~~-~~~~~ 165 (286)
+.. .. ....|.|.++..+| |.|+|.|.|..+... ....+.+.. .|.+.. .+...
T Consensus 162 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~ 239 (434)
T 1igy_B 162 SGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK-VDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPK 239 (434)
T ss_dssp SSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC-EEEECCCCCCCCCCCCCCCSSSCCEEEECCCHH
T ss_pred CCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc-ceeeccCCCCCCccccCCCCcCcEEEEeCCChH
Confidence 421 00 12458899999999 999999999887632 123332210 033322 22222
Q ss_pred --EecCCCEEEEeeEeeec----CCeEEEEEcCCccc-------------------c---------------cc------
Q psy15667 166 --AIDGEGLSIKCPVAGYP----IEEVHWEKVPPKIE-------------------S---------------FA------ 199 (286)
Q Consensus 166 --~~~g~~~~l~c~~~~~p----~~~v~w~~~~~~~~-------------------~---------------~~------ 199 (286)
+..|+.+.|.|.+.|.| .+.+.|.+....+. . |.
T Consensus 240 ~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 319 (434)
T 1igy_B 240 DTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAF 319 (434)
T ss_dssp HHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSC
T ss_pred HhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCC
Confidence 67899999999999984 34799987321110 0 00
Q ss_pred ----------------cc-------cCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCceee-ecCC---Cee
Q psy15667 200 ----------------FP-------FDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVS-DLDS---FSS 251 (286)
Q Consensus 200 ----------------~~-------~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~-~~~~---~~~ 251 (286)
.+ .....+|+.+.|.|.+....|+ +.+.|+|+|..+......... ..++ ...
T Consensus 320 ~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s 399 (434)
T 1igy_B 320 PAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYS 399 (434)
T ss_dssp SSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEE
T ss_pred CCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEE
Confidence 00 0012247789999998754453 589999999987432111110 0011 124
Q ss_pred eEEEcccCCCCCeEEEEEEEecccc
Q psy15667 252 LLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 252 ~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
.|.|.....+|+|.|+|.|.|....
T Consensus 400 ~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 400 KLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred EEEECchhccCCCEEEEEEEcCCCC
Confidence 5778888788999999999998654
No 75
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.92 E-value=1.2e-23 Score=167.16 Aligned_cols=187 Identities=26% Similarity=0.423 Sum_probs=113.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeE-eceEEecccce-eEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFV-IGQFVSGHGDV-ISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~-~~~~~~~~~~~-~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.++.+.+|++++|.|.+.|+|.+.+.|++++..+....... ........+.. ...|.|.+++.+|+|.|+
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEE
Confidence 7899999999999999999999999999999999999998886432100 00000011110 011223344444455555
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC-ce
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLP-YV 158 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~-~~ 158 (286)
| .+.|..|........|.|...+ .+
T Consensus 89 C------------------------------------------------------~~~n~~g~~~~~~~~l~V~~~~~~~ 114 (212)
T 2v9r_A 89 C------------------------------------------------------VARNYLGEAVSHDASLEVAILRDDF 114 (212)
T ss_dssp E------------------------------------------------------EEEETTEEEECCCEEEEECEECSSC
T ss_pred E------------------------------------------------------EEECCCCceeecceEEEEEeccccc
Confidence 5 4444443322223334432211 11
Q ss_pred e-cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 159 R-LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 159 ~-~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
. ......+.. |+.+.|.|.+..+.|.+.+.|+|+|..+..
T Consensus 115 ~~~~~~~~~~~---------------------------------------g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~ 155 (212)
T 2v9r_A 115 RQNPSDVMVAV---------------------------------------GEPAVMECQPPRGHPEPTISWKKDGSPLDD 155 (212)
T ss_dssp SBCCCCEEEET---------------------------------------TSCEEEECBCCCEESCCEEEEEETTEEECT
T ss_pred eeCCCceEecC---------------------------------------CCcEEEEEecCCCCCCCEEEEEECCccCCC
Confidence 1 111223334 445555554434566778889999988865
Q ss_pred CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE-EEEEE
Q psy15667 238 RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS-SKLQV 285 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~-~~L~V 285 (286)
........ .+.|.|.++..+|+|.|+|.|.|..|..... +.|.|
T Consensus 156 ~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V 200 (212)
T 2v9r_A 156 KDERITIR----GGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTV 200 (212)
T ss_dssp TSTTEEEE----TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CcceEEcc----CCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEE
Confidence 43322221 3479999999999999999999999986553 77776
No 76
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.92 E-value=1e-23 Score=185.55 Aligned_cols=186 Identities=17% Similarity=0.186 Sum_probs=127.1
Q ss_pred CCCeeEEEeeCCccCcCCC-------CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEec
Q psy15667 96 SGPYLIAWFKDGRQIPGRT-------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAID 168 (286)
Q Consensus 96 ~~~~~~~W~~~g~~l~~~~-------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~ 168 (286)
.+++.+.|++++..+.... ....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|...|.+.......+..
T Consensus 75 ~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~~~~~p~~~~~ 153 (423)
T 3qs7_E 75 PGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY-TILFTVSIRNTLLYTLRRPYFRKM 153 (423)
T ss_dssp CSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEE-EEEEEEEEC-----CEEEEEEEEC
T ss_pred CCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcE-EEEEEEEEecCccccccCCcEecc
Confidence 3457899999987765321 12469999999999999999999998875 346778887555443222234556
Q ss_pred CCCEEEEeeEeeecCCeEEEEEcCCcccc-------------------------c------------------------c
Q psy15667 169 GEGLSIKCPVAGYPIEEVHWEKVPPKIES-------------------------F------------------------A 199 (286)
Q Consensus 169 g~~~~l~c~~~~~p~~~v~w~~~~~~~~~-------------------------~------------------------~ 199 (286)
|..+.|.|.+.|.|.|.|.|.+....... | .
T Consensus 154 ~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~ 233 (423)
T 3qs7_E 154 ENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTT 233 (423)
T ss_dssp SSSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSS
T ss_pred CCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccC
Confidence 88889999999999999999873211100 0 0
Q ss_pred cccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeec-----CCCeeeEEEcccCCCCCeEEEEEEEecc
Q psy15667 200 FPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL-----DSFSSLLSINSVSAAHSGEYTCVASNTA 274 (286)
Q Consensus 200 ~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 274 (286)
.....+.+|+.+.|.|.+....|.+.+.|+|+|..+........... ......|.|.++..+|+|.|+|.|.|.
T Consensus 234 ~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~- 312 (423)
T 3qs7_E 234 LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH- 312 (423)
T ss_dssp TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE-
T ss_pred CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC-
Confidence 00122567999999999986578899999999998754321111110 011357999999999999999999999
Q ss_pred cceeeEEEEEE
Q psy15667 275 AQARYSSKLQV 285 (286)
Q Consensus 275 g~~~~~~~L~V 285 (286)
...++.|.|
T Consensus 313 --~~~~~~L~V 321 (423)
T 3qs7_E 313 --PSQSALVTI 321 (423)
T ss_dssp --EEEEEEEEE
T ss_pred --CCceEEEEE
Confidence 566666765
No 77
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.91 E-value=8.6e-24 Score=166.55 Aligned_cols=78 Identities=15% Similarity=0.206 Sum_probs=57.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|+|+|..+....+... .......|.|.+++.+|+|.|+|.
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~------~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPL------EPKNKARFSIPSMTEDYAGRYRCY 76 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCC------SSSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccc------cCCceEEEEeccCCcccCceEEEE
Confidence 6788877766 8999999999999998 7789999999987754221110 011123577888888888888888
Q ss_pred EEcCCE
Q psy15667 82 AENRAG 87 (286)
Q Consensus 82 a~n~~g 87 (286)
|.|..|
T Consensus 77 a~n~~g 82 (196)
T 3p2t_A 77 YRSPVG 82 (196)
T ss_dssp EEETTE
T ss_pred EeCCCc
Confidence 887654
No 78
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.91 E-value=3e-23 Score=166.95 Aligned_cols=186 Identities=25% Similarity=0.404 Sum_probs=118.1
Q ss_pred CCeeEecc----ccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSF----IEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~----~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+ ....+.+|++++|.|.+.|.|.+.+.|++++..+....++..... . .+. ..|.|.+++.+|+|.
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~-~~~--~~L~i~~~~~~d~G~ 90 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKV-R-NQH--WSLIMESVVPSDKGN 90 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEE-E-GGG--TEEEECSCCGGGCEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceee-e-cCc--ceEEEecCCcccCEE
Confidence 67776665 677899999999999999999999999999998865443311111 0 111 137778888888888
Q ss_pred EEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC--
Q psy15667 78 YACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL-- 155 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~-- 155 (286)
|+|.+.|..|.... ...|.|...
T Consensus 91 Y~C~~~n~~~~~~~-------------------------------------------------------~~~l~V~~~~~ 115 (231)
T 3ojm_B 91 YTCVVENEYGSINH-------------------------------------------------------TYHLDVVERSR 115 (231)
T ss_dssp EEEEEEETTEEEEE-------------------------------------------------------EEEEEEECCCC
T ss_pred EEEEEecccCcccc-------------------------------------------------------cEEEEEEcCCC
Confidence 88877776554321 122222111
Q ss_pred --Cceec--CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe-
Q psy15667 156 --PYVRL--IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK- 230 (286)
Q Consensus 156 --~~~~~--~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~- 230 (286)
|.+.. .....+..|+.+.|.|.+.+.|.+ .+.|+|
T Consensus 116 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p----------------------------------------~v~W~~~ 155 (231)
T 3ojm_B 116 HRPILQAGLPANASTVVGGDVEFVCKVYSDAQP----------------------------------------HIQWIKH 155 (231)
T ss_dssp CCCEECTTCSCCEEEETTCCEEEECCEECSSCC----------------------------------------EEEEEEE
T ss_pred CCCceeeccCCceEEEeCCcEEEEEEEecCCCC----------------------------------------EEEEEEC
Confidence 11110 123445567777777766555544 455555
Q ss_pred ---CCeeCCCCCCcee--ee----cCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 231 ---DGKPLSPRFPVNV--SD----LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 231 ---~g~~~~~~~~~~~--~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
+|..+........ .. .......|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 156 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 156 VEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220 (231)
T ss_dssp CCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence 4444432221111 00 01123579999999999999999999999999999998873
No 79
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.91 E-value=5.5e-23 Score=164.71 Aligned_cols=183 Identities=21% Similarity=0.305 Sum_probs=119.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
.+.|...+.++.+.+|+++.|.|.+.+.|.+.+.|++++..+..... ..|.|.+++.+|+|.|+|.
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT--------------SELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCS--------------SEEEETTCCGGGCEEEEEE
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCC--------------CEEEEccCChhhCeEeEEE
Confidence 46788899999999999999999999999999999999988764321 1378899999999999998
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI 161 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~ 161 (286)
+.|..|... +..+.|.|...+.....
T Consensus 84 ~~n~~~~~~------------------------------------------------------s~~~~l~V~~~~~~~~~ 109 (218)
T 3k0w_A 84 VNNNFTFEF------------------------------------------------------SQWSQLDVCDIPESFQR 109 (218)
T ss_dssp EECTTCCEE------------------------------------------------------CCCEEEEEECCCGGGCT
T ss_pred EEcCCCCce------------------------------------------------------eeEEEEEEEccCccccc
Confidence 888643221 00111222111100000
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCc
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 241 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~ 241 (286)
. ..... .+.|.+. . ......+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+....
T Consensus 110 ~-~~~~~------------~~~p~~~--~--------~~~~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~~~~-- 163 (218)
T 3k0w_A 110 S-VDGVS------------ESKLQIC--V--------EPTSQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLTHET-- 163 (218)
T ss_dssp T-CCSBC------------CSSCEEE--E--------CCCCEEECTTCCEEEECEE-EBSSCCEEEEEETTEECTTCC--
T ss_pred c-ccccc------------CCCceEE--E--------CCCceeecCCCcEEEEEEe-cccCCCeEEEEECCEECCCCC--
Confidence 0 00000 0000000 0 0001124456666777766 366778899999998875432
Q ss_pred eeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc-eeeEEEEEEC
Q psy15667 242 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYSSKLQVK 286 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~L~V~ 286 (286)
...|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 164 --------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 164 --------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp --------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred --------CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 347999999999999999999999886 6667777663
No 80
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.91 E-value=1.8e-24 Score=171.56 Aligned_cols=187 Identities=20% Similarity=0.218 Sum_probs=107.7
Q ss_pred cccccCCCcEEEEEE---eecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE
Q psy15667 11 EQTLQPGPAVSLKCI---ASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG 87 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~---~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g 87 (286)
++++..|+.++|.|. +.+.|.|.|.|+|+|..+.. .... ...... +.+..-. .|.|.-
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~---~~~~---~~~~~~---~~~~~~~---~~~~~~------- 62 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQ---VLIG---RMHHDV---IFIEWPF---RGFFDI------- 62 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEE---EEEE---EEETTE---EEECGGG---BTTEEE-------
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcce---EEEE---ecCCce---EEeeccc---cceEEE-------
Confidence 467899999999995 66889999999998754321 1000 000000 0000000 011100
Q ss_pred EEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEe
Q psy15667 88 TCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAI 167 (286)
Q Consensus 88 ~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~ 167 (286)
+. ......|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..+|.+...+.
T Consensus 63 ----------------~~-------~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~p~~~~~~~~---- 114 (203)
T 4fa8_A 63 ----------------HR-------SANTFFLVVTAANISHDGNYLCRMKLGETEV-TKQEHLSVVKPLTLSVHSE---- 114 (203)
T ss_dssp ----------------EE-------ETTEEEEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEEEEE----
T ss_pred ----------------EE-------cCCEEEEEEccCCHHHCeEEEEEEEcCCCcE-EEEEEEEecCCceeeecce----
Confidence 00 0123569999999999999999999988765 3456676654332221111
Q ss_pred cCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC----CCCcee
Q psy15667 168 DGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP----RFPVNV 243 (286)
Q Consensus 168 ~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~----~~~~~~ 243 (286)
...+.+|+.+.|.|.+. |.|.|.+.|++++..+.. ..++.+
T Consensus 115 ----------------------------------~~~v~~g~~~~l~C~~~-G~P~P~v~W~~~~~~~~~~~~~~~r~~~ 159 (203)
T 4fa8_A 115 ----------------------------------RSQFPDFSVLTVTCTVN-AFPHPHVQWLMPEGVEPAPTAANGGVMK 159 (203)
T ss_dssp ----------------------------------ECCSSCSCCEEEEEEEE-EESCCEEEECCC------------CCEE
T ss_pred ----------------------------------eEEEcCCCEEEEEEEcC-CCCCCEEEEEECCeeecCcccccceEEE
Confidence 12244566666666553 556667777765543321 112222
Q ss_pred eecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 244 SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 244 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
. .++.-..|.|.++..+|+|.|+|.|.|.+|+++..
T Consensus 160 ~-~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 160 E-KDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp C-TTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred e-CCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 1 11222345667999999999999999999998753
No 81
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.91 E-value=9.1e-24 Score=163.44 Aligned_cols=164 Identities=17% Similarity=0.233 Sum_probs=111.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCe-eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPD-IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~-v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.|...+....+.+|++++|.|.+.+.|.+. +.|++||..+..+. ..|.|.+++.+|+|.|+|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~~---------------~~L~i~~~~~~d~G~Y~C 71 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQA---------------SSYFIDAATVNDSGEYRC 71 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESSC---------------SEEEESSCCGGGCEEEEE
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCCc---------------eEEEEeCCCcccCEEEEE
Confidence 68888888888999999999999999998776 78999998764321 137788888888888888
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.+.|..+ +....|.|...+.+..
T Consensus 72 ~~~n~~~---------------------------------------------------------s~~~~l~V~~~~~~~~ 94 (175)
T 1fnl_A 72 QTNLSTL---------------------------------------------------------SDPVQLEVHIGWLLLQ 94 (175)
T ss_dssp ECSSSCC---------------------------------------------------------CCCEEEEEECSSEEEE
T ss_pred EeeCCcc---------------------------------------------------------cccEEEEEeCCCceee
Confidence 7766211 0112222221111111
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.+... +.+|+.+.|.|.+..+.|++.+.|+|+|..+...
T Consensus 95 ~~~~~---------------------------------------~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-- 133 (175)
T 1fnl_A 95 APRWV---------------------------------------FKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-- 133 (175)
T ss_dssp CSCSE---------------------------------------EETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--
T ss_pred CCCce---------------------------------------ecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--
Confidence 11112 3345556666655444555689999999876311
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc-ceeeEEEEEE
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA-QARYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~L~V 285 (286)
.....|.|.++..+|+|.|+|.|.|..| ..+.++.|.|
T Consensus 134 -------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 172 (175)
T 1fnl_A 134 -------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 172 (175)
T ss_dssp -------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEE
Confidence 1145799999999999999999999655 4566677766
No 82
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.91 E-value=7.4e-24 Score=168.26 Aligned_cols=194 Identities=23% Similarity=0.368 Sum_probs=121.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|+.|...+.++.+.+|++++|.|.+.+.|.+.+.|++++..+.. +.. ... .+.....+.+
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~---~~~------~~~--------~~~~~~~~r~--- 60 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTA---LVC------YNS--------QITAPYADRV--- 60 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEE---EEE------ETT--------EECGGGTTTE---
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceee---EEe------cCC--------cccccccCcE---
Confidence 56788888888999999999999999999999999998754310 000 000 0000000000
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcce-eeeeeEEEEcCCCceec
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGLPYVRL 160 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~-~~~~~~l~v~~~~~~~~ 160 (286)
.. ....|.|.++..+|+|.|+|.+.+..|.. ....+.|.|..+|.+..
T Consensus 61 --------------------~~-----------~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 109 (212)
T 1f97_A 61 --------------------TF-----------SSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPT 109 (212)
T ss_dssp --------------------EE-----------ETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCE
T ss_pred --------------------Ee-----------eceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcc
Confidence 00 01457777777777777777777765521 23345566654433211
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCe-eCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK-PLSPRF 239 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~-~~~~~~ 239 (286)
.+. ...+.+|+.+.|.|.+..+.|.+.+.|+|++. .+....
T Consensus 110 ~~~--------------------------------------~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~ 151 (212)
T 1f97_A 110 ISV--------------------------------------PSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADA 151 (212)
T ss_dssp EEC--------------------------------------CSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC---
T ss_pred cCC--------------------------------------ccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccc
Confidence 100 11234566677777654577788889999988 775432
Q ss_pred Cc-------eeeecCCCeeeEEEcccCCCCCeEEEEEEEecccce--eeEEEEEE
Q psy15667 240 PV-------NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSSKLQV 285 (286)
Q Consensus 240 ~~-------~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~--~~~~~L~V 285 (286)
.. .+.. ......|.|.++..+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 152 ~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 152 KKTRAFMNSSFTI-DPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp --CBSCSSSCEEE-CTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEE
T ss_pred cccccccCceeEe-cCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEE
Confidence 21 1111 1235689999999999999999999999988 56666665
No 83
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=8.5e-24 Score=181.05 Aligned_cols=253 Identities=15% Similarity=0.197 Sum_probs=139.1
Q ss_pred ccccccccCCCcEEEEEEeecC--CCCeeEEeeC--CEEcC-----------------CCCeeEeceEEecccceeEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD--GFELP-----------------TNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~--~~~l~-----------------~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
.+..+++.+|++++|.|.+.+. |.+.+.|+|+ +..+. ...|+.+.. . .......|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~--~-~~~~~~~L~ 82 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTA--D-TSASTAYVE 82 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEE--E-TTTTEEEEE
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEE--e-cCCCEEEEE
Confidence 4556789999999999999987 4689999987 33220 123443321 0 111223699
Q ss_pred EcccccCCCeEEEEEEEcCCEE------EEEe------------c-----------------CCCCC--eeEEEeeCCcc
Q psy15667 67 ISHVTVEDGGEYACVAENRAGT------CEIT------------P-----------------YDSGP--YLIAWFKDGRQ 109 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~~g~------~~~~------------~-----------------~~~~~--~~~~W~~~g~~ 109 (286)
|.+++.+|+|.|+|.|.|..+. ..+. + .+..| +.+.|+|||..
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred ECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 9999999999999999885321 1111 0 00112 57999999976
Q ss_pred CcC---------CC---CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEee
Q psy15667 110 IPG---------RT---SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCP 177 (286)
Q Consensus 110 l~~---------~~---~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~ 177 (286)
+.. .. ....|.|.++..+| |.|+|.|.|..+... ....+.+... +..........|. .+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~-~~~~~~~~v~--~~~~~~~~~~~~~--~l~~~ 236 (344)
T 1za6_B 163 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK-VDKKVEPKSC--DKTHTCPPCGGGS--SGGGS 236 (344)
T ss_dssp TTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEE-EEEEECCCCC----------------------
T ss_pred CceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc-ceEeeccccc--ccccccCCCCCCc--ccccc
Confidence 421 00 12368898888888 999999999876531 1122211000 0000000000000 00000
Q ss_pred EeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeeecCC----Ceee
Q psy15667 178 VAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDS----FSSL 252 (286)
Q Consensus 178 ~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~~~~----~~~~ 252 (286)
.....+|.+.-. . +.....+|+.+.|.|.+....| .+.+.|+|+|..+.......+..... ....
T Consensus 237 ~~~~~~P~v~~~---------~-~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~ 306 (344)
T 1za6_B 237 GGQPREPQVYTL---------P-PSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK 306 (344)
T ss_dssp --CCBCCEEEEE---------C-CCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEE
T ss_pred CCCCcCCEEEEe---------C-CChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEE
Confidence 000011121110 0 0111223556889998865344 47899999998875432111111111 1235
Q ss_pred EEEcccCCCCCeEEEEEEEecccceee
Q psy15667 253 LSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 253 L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
|.|.....+|+|.|+|.|.|.......
T Consensus 307 l~i~~~~~~~~g~YtC~a~~~~l~~~~ 333 (344)
T 1za6_B 307 LTVDKSRWQQGNVFSCSVMHEALHNHY 333 (344)
T ss_dssp EEECHHHHHTTCEEEEEEECTTSTTSE
T ss_pred EEEChHHccCCCeEEEEEEcCCCCCCe
Confidence 667777778899999999998754433
No 84
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.91 E-value=5.6e-23 Score=166.70 Aligned_cols=186 Identities=27% Similarity=0.400 Sum_probs=114.4
Q ss_pred CCeeEecc----ccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSF----IEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~----~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
||.|.... ....+.+|++++|.|.+.|.|.+.+.|++++..+....++..... . ... ..|.|.+++.+|+|.
T Consensus 11 ~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~-~~~--~~L~i~~v~~~d~G~ 86 (241)
T 3grw_A 11 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKL-R-HQQ--WSLVMESVVPSDRGN 86 (241)
T ss_dssp CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEE-E-GGG--TEEEECSCCGGGCEE
T ss_pred CceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceee-e-ccc--eEEEEEeCCcccCEE
Confidence 56666443 356889999999999999999999999999998864433211011 0 111 136777777777777
Q ss_pred EEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC--
Q psy15667 78 YACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL-- 155 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~-- 155 (286)
|+|.+.|..|.... ...|.|...
T Consensus 87 Y~C~~~~~~~~~~~-------------------------------------------------------~~~l~V~~~~~ 111 (241)
T 3grw_A 87 YTCVVENKFGSIRQ-------------------------------------------------------TYTLDVLERSP 111 (241)
T ss_dssp EEEEEEETTEEEEE-------------------------------------------------------EEEEEEECCCC
T ss_pred EEEEEeecCCceEE-------------------------------------------------------EEEEEEeccCC
Confidence 77777765544321 122222111
Q ss_pred --Cceec--CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe-
Q psy15667 156 --PYVRL--IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK- 230 (286)
Q Consensus 156 --~~~~~--~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~- 230 (286)
+.+.. ..... +.+|+.+.|.|.+. +.|.+.+.|++
T Consensus 112 ~~~~~~~~~~~~~~---------------------------------------~~~g~~v~L~C~~~-~~p~p~v~W~~~ 151 (241)
T 3grw_A 112 HRPILQAGLPANQT---------------------------------------AVLGSDVEFHCKVY-SDAQPHIQWLKH 151 (241)
T ss_dssp CCCEEEECTTCSEE---------------------------------------CCTTCCEEEEEEEE-CSSCCEEEEEEE
T ss_pred CCceeecCCCccce---------------------------------------ecCCCEEEEEEEEe-cCCCCEEEEEEc
Confidence 00000 11122 33445555555442 44555677777
Q ss_pred ---CCeeCCCCCCceeee-------cCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 231 ---DGKPLSPRFPVNVSD-------LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 231 ---~g~~~~~~~~~~~~~-------~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
+|..+.......... .......|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 217 (241)
T 3grw_A 152 VEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVH 217 (241)
T ss_dssp CCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC-
T ss_pred ccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEec
Confidence 666554332211110 01125679999999999999999999999999999999874
No 85
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.91 E-value=2.1e-23 Score=160.31 Aligned_cols=165 Identities=19% Similarity=0.329 Sum_probs=115.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCC-CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNP-TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.|.|...+....+.+|++++|.|.+.+.| .+.+.|+++|..+..... .+.|.+++.+|+|.|+|
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~---------------~~~~~~~~~~d~G~Y~C 68 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ---------------PSYRFKANNNDSGEYTC 68 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS---------------SEEEEECCGGGCEEEEE
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc---------------ceEEEecccccCeEEEE
Confidence 46677788778899999999999999987 679999999998865321 14467888888888888
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.+.|... ...+.|.|...+.+..
T Consensus 69 ~~~~~~~---------------------------------------------------------s~~~~l~v~~~~~~~~ 91 (170)
T 3ry4_A 69 QTGQTSL---------------------------------------------------------SDPVHLTVLFEWLVLQ 91 (170)
T ss_dssp EETTSBC---------------------------------------------------------CCCEEEEEECCSEEEE
T ss_pred EEeCCCc---------------------------------------------------------eEeEEEEEECCceEec
Confidence 7775210 0012222322111111
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.+.. .+.+|+.+.|.|.+..+.|.+.+.|+|+|..+...
T Consensus 92 ~~~~---------------------------------------~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-- 130 (170)
T 3ry4_A 92 TPHL---------------------------------------EFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS-- 130 (170)
T ss_dssp CSCS---------------------------------------EECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE--
T ss_pred CCCc---------------------------------------eeecCCeEEEEEECCCCCCCceEEEEECCeEcccc--
Confidence 1111 23456666677766556677899999999865311
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc-eeeEEEEEEC
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYSSKLQVK 286 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~L~V~ 286 (286)
.....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|+
T Consensus 131 -------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 131 -------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp -------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred -------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEEC
Confidence 12457999999999999999999999997 6667778775
No 86
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.91 E-value=1.4e-23 Score=162.52 Aligned_cols=164 Identities=20% Similarity=0.238 Sum_probs=112.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC-eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.|...+.+..+.+|++++|.|.+.+.|.+ .+.|++++..+..+. ..|.|.+++.+|+|.|+|
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~---------------~~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETN---------------SSLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCS---------------SEEEECSCCGGGCEEEEE
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCc---------------eEEEEeccceecCEEEEE
Confidence 6889999999999999999999999998885 699999998875321 137788999999999999
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.+.|..+. ..+.|.|...+.+..
T Consensus 69 ~~~~~~~s---------------------------------------------------------~~~~l~V~~~~~~~~ 91 (176)
T 1f2q_A 69 QHQQVNES---------------------------------------------------------EPVYLEVFSDWLLLQ 91 (176)
T ss_dssp ECTTSSCC---------------------------------------------------------CCEEEEEECSSEEEE
T ss_pred EcCCcccc---------------------------------------------------------ccEEEEEeCcceeec
Confidence 87663210 011222221111100
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.+... +.+|+.+.|.|.+..+.|.+.+.|+|+|..+....
T Consensus 92 ~~~~~---------------------------------------~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~- 131 (176)
T 1f2q_A 92 ASAEV---------------------------------------VMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY- 131 (176)
T ss_dssp ESCSE---------------------------------------EETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC-
T ss_pred CCcce---------------------------------------eeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec-
Confidence 11112 33566666666665566778999999998874221
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecc-cceeeEEEEEE
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA-AQARYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~-g~~~~~~~L~V 285 (286)
....|.|.++..+|+|.|+|.|.|.. +..+.++.|.|
T Consensus 132 --------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V 169 (176)
T 1f2q_A 132 --------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITV 169 (176)
T ss_dssp --------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEE
Confidence 24589999999999999999999964 44555567766
No 87
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.90 E-value=2.3e-23 Score=164.14 Aligned_cols=173 Identities=17% Similarity=0.249 Sum_probs=99.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.+|.|...+. ..+.+|++++|.|.+.+.|. .+.|+|+|..+....+... .......|.|.+++.+|+|.|+|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~------~~~~~~~L~i~~v~~~D~G~Y~C 75 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPL------EPKNKARFSIPSMTEHHAGRYRC 75 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCC------SSTTEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCccccccc------CCccccEEEeccCChhHCeEEEE
Confidence 3688887775 58999999999999998876 8999999987643211000 00111247777888888888888
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCc
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPY 157 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~ 157 (286)
.|.|..|... .+..+.|.|.. .|.
T Consensus 76 ~a~n~~g~~~-----------------------------------------------------~s~~~~l~V~~~~~~p~ 102 (196)
T 2d3v_A 76 YYYSPAGWSE-----------------------------------------------------PSDPLELVVTGFYNKPT 102 (196)
T ss_dssp EEEETTEECB-----------------------------------------------------CCCCEEEEEECSSCCCE
T ss_pred EEeCCCCcCC-----------------------------------------------------cCccEEEEecCCCCCCe
Confidence 7766543210 01112233321 111
Q ss_pred eecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 158 VRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 158 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
+...+. ..+.+|+.+.|.|.+. +.| +.+.|+|+|..+..
T Consensus 103 i~~~~~---------------------------------------~~v~~G~~v~L~C~~~-~~p-~~~~W~k~g~~~~~ 141 (196)
T 2d3v_A 103 LSALPS---------------------------------------PVVTSGENVTLQCGSR-LRF-DRFILTEEGDHKLS 141 (196)
T ss_dssp EEC--------------------------------------------------CEEEEEES-SCC-SEEEEEEC---CCE
T ss_pred EEccCC---------------------------------------ccccCCCcEEEEEEcC-CCC-CEEEEEccCCcccc
Confidence 111111 1244566666666654 444 78899999887642
Q ss_pred CCCc-eeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 238 RFPV-NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 238 ~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.... ...........|.|.+++.+|+|.|+|.|.|..+
T Consensus 142 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 142 WTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 2110 0111112246899999999999999999999765
No 88
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.90 E-value=1.1e-22 Score=177.24 Aligned_cols=183 Identities=28% Similarity=0.493 Sum_probs=140.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC---CCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT---NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~---~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.|...+.+..+.+|++++|.|.+.|.|.+.+.|++++..+.. ..++.. . ... .|.|.+++.+|+|.|
T Consensus 121 p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~-~~~---~L~i~~~~~~d~G~Y 192 (403)
T 3laf_A 121 PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVV----L-PSG---ALQISRLQPGDSGVY 192 (403)
T ss_dssp CCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEE----C-TTS---CEEECSCCGGGCEEE
T ss_pred CCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEE----c-CCc---eEEEcccccccCEEE
Confidence 67777777788899999999999999999999999999988742 333321 1 111 488999999999999
Q ss_pred EEEEEcCCEE-----EEEe----c-----------------------------CCCCCeeEEEeeCCccCcCCC------
Q psy15667 79 ACVAENRAGT-----CEIT----P-----------------------------YDSGPYLIAWFKDGRQIPGRT------ 114 (286)
Q Consensus 79 ~C~a~n~~g~-----~~~~----~-----------------------------~~~~~~~~~W~~~g~~l~~~~------ 114 (286)
+|.|.|..|. ..+. + ...+++.+.|++++..+....
T Consensus 193 ~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~ 272 (403)
T 3laf_A 193 RCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL 272 (403)
T ss_dssp EEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE
T ss_pred EEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC
Confidence 9999986542 1110 0 001345799999998876432
Q ss_pred CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCC
Q psy15667 115 SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPP 193 (286)
Q Consensus 115 ~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~ 193 (286)
....|.|.++..+|+|.|+|.+.|..|.. ...+.|.|..+|.+... ....+..|+.+.|.|.+.|.|.|.+.|.+...
T Consensus 273 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~ 351 (403)
T 3laf_A 273 GGSNLLISNVTDDDSGTYTCVVTYKNENI-SASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGD 351 (403)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTE
T ss_pred CccEEEEeCCCHHHCEEEEEEEEcCCCce-EEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCE
Confidence 23579999999999999999999998865 45678888766655443 34667789999999999999999999998653
No 89
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.90 E-value=4.7e-23 Score=176.69 Aligned_cols=180 Identities=24% Similarity=0.306 Sum_probs=113.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe-EEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG-EYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G-~Y~C 80 (286)
+|.|...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+....... .......|.|.+++.+|+| .|+|
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~-------~~~~~~~L~i~~v~~~D~G~~Y~C 230 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS-------GGLPSLGLTLANVTSDLNRKNVTC 230 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC-------CCSSEEEEEEESCCSTTTTCCEEE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc-------eecccceEEEeeCChHHCCCeEEE
Confidence 7899999999999999999999999999999999999986543111000 0001123555555555555 5555
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~ 160 (286)
.|.|.. |.. ...+.|.|..+|.+ .
T Consensus 231 ~a~n~~------------------------------------------------------g~~-~~~~~l~V~~~P~i-~ 254 (347)
T 2ifg_A 231 WAENDV------------------------------------------------------GRA-EVSVQVNVSFPASV-Q 254 (347)
T ss_dssp CCEETT------------------------------------------------------EEC-CEEECCCCBEEEEE-E
T ss_pred EEEcCC------------------------------------------------------CCE-EEEEEEEEcCCCee-e
Confidence 555543 332 12233333222221 0
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.....+|+.++|.|.+.|. |.|.+.|+|+|..+.....
T Consensus 255 --~~~~~~g~~v~l~C~~~g~----------------------------------------P~p~i~W~~~g~~l~~~~~ 292 (347)
T 2ifg_A 255 --LHTAVEMHHWCIPFSVDGQ----------------------------------------PAPSLRWLFNGSVLNETSF 292 (347)
T ss_dssp --ECCCEESSSEEEEEEEEEE----------------------------------------SCCEEEEEETTEECCCCSS
T ss_pred --eccCccCceEEEEEEeeec----------------------------------------CCCcEEEEeCCEECCCCcc
Confidence 0011245555555555544 5556777777777764433
Q ss_pred ceeeecC------CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 241 VNVSDLD------SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 241 ~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
....... ...+.|.|.++..+|+|.|+|.|.|.+|....++.|.|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 293 IFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp EEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred eeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEec
Confidence 2221111 125679999999999999999999999999999988763
No 90
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.90 E-value=3.6e-22 Score=160.68 Aligned_cols=128 Identities=15% Similarity=0.141 Sum_probs=76.3
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec-CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL-IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.++..+|+|.|+|.+.|..|.. ...+.+...+.... .....+
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~---~~~v~~~~~~~~~~~~~~~~~---------------------------- 130 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYE---KALVELKVAALGSDLHVDVKG---------------------------- 130 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEE---EEEEEEEEEBCCCCCEEEEEE----------------------------
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEE---EEEEEEeeccceecccceeee----------------------------
Confidence 3579999999999999999999987654 23333321111110 011222
Q ss_pred ccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC-CCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 195 IESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL-SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
.+|..+.|.|.+..+.|.|.+.|+|++..+ ............+.-..+.+..++.+|+|.|+|.|.|.
T Consensus 131 -----------~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~ 199 (226)
T 4f80_A 131 -----------YKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSS 199 (226)
T ss_dssp -----------EETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEET
T ss_pred -----------ccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeC
Confidence 245555566655545577788888755433 32222222222222233456678899999999999999
Q ss_pred ccceeeEEEEEE
Q psy15667 274 AAQARYSSKLQV 285 (286)
Q Consensus 274 ~g~~~~~~~L~V 285 (286)
+|....++.|.|
T Consensus 200 ~g~~~~~~~v~v 211 (226)
T 4f80_A 200 LLGLEKTASISI 211 (226)
T ss_dssp TTTEEEEEEECC
T ss_pred CCCeEEEEEEEE
Confidence 999999998876
No 91
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.89 E-value=1.9e-22 Score=159.10 Aligned_cols=183 Identities=19% Similarity=0.241 Sum_probs=106.2
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.+|.|...+. .++.+|++++|.|.+.+.|. .+.|+|+|..+....+... ..... ..|.|.+++.+|+|.|+|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~---~~~~~---~~L~i~~v~~~D~G~Y~C 75 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQ---ELVKK---GQFPIPSITWEHTGRYRC 75 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCH---HHHTT---TEEEESSCCGGGCEEEEE
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccccc---cCCcc---cEEEECCCCHHHCeEEEE
Confidence 3788887665 58999999999999999886 6999999987632111000 00011 137788888888888888
Q ss_pred EEEcCC-EEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CC
Q psy15667 81 VAENRA-GTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LP 156 (286)
Q Consensus 81 ~a~n~~-g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~ 156 (286)
.|.|.. |... .+..+.|.|.. .|
T Consensus 76 ~a~n~~~g~~~-----------------------------------------------------~s~~~~l~V~~~~~~p 102 (198)
T 1ugn_A 76 YYGSDTAGRSE-----------------------------------------------------SSDPLELVVTGAYIKP 102 (198)
T ss_dssp EEEETTTEECC-----------------------------------------------------CCCCEEEEEECSSCCC
T ss_pred EEECCCCCccc-----------------------------------------------------CCccEEEEEcccccCC
Confidence 887754 2110 01112233322 11
Q ss_pred ceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCC
Q psy15667 157 YVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLS 236 (286)
Q Consensus 157 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~ 236 (286)
.+...+... +.+|+.+.|.|.+. +. ++.+.|+|+|..+.
T Consensus 103 ~i~~~~~~~---------------------------------------v~~G~~v~L~C~~~-~~-~~~v~W~k~g~~~~ 141 (198)
T 1ugn_A 103 TLSAQPSPV---------------------------------------VNSGGNVTLQCDSQ-VA-FDGFILCKEGEDEH 141 (198)
T ss_dssp EEEEESCSE---------------------------------------EETTCCEEEEEECS-SC-CSEEEEEEC-----
T ss_pred ccccCCccc---------------------------------------cCCCCcEEEEEecC-CC-CcEEEEEECCCccC
Confidence 111111122 33556666666554 33 57889999988764
Q ss_pred CCCC-ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc-----eeeEEEEEE
Q psy15667 237 PRFP-VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-----ARYSSKLQV 285 (286)
Q Consensus 237 ~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-----~~~~~~L~V 285 (286)
.... ............|.|.++..+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 142 ~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 196 (198)
T 1ugn_A 142 PQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLV 196 (198)
T ss_dssp -CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEE
T ss_pred CccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEe
Confidence 3211 111111123478999999999999999999998762 245556665
No 92
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.89 E-value=4e-23 Score=163.64 Aligned_cols=195 Identities=23% Similarity=0.365 Sum_probs=121.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
++.|...+.+..+.+|+++.|.|.+.+.|.+.+.|++++..+.. +. . .. +.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~---~~-----~-~~----------------~~---- 54 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTR---LV-----C-YN----------------NK---- 54 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEE---ES-----E-ET----------------TE----
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeE---EE-----E-ec----------------Cc----
Confidence 56677788888999999999999999999999999998644210 00 0 00 00
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcce-eeeeeEEEEcCCCceec
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGLPYVRL 160 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~-~~~~~~l~v~~~~~~~~ 160 (286)
+......... .....|.|.++..+|+|.|+|.+.+..|.. ......|.|...|.+..
T Consensus 55 ---------~~~~~~~r~~-------------~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~ 112 (209)
T 1nbq_A 55 ---------ITASYEDRVT-------------FLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPT 112 (209)
T ss_dssp ---------ECTTTTTTCE-------------EETTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCC
T ss_pred ---------cCccccCceE-------------eeccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCC
Confidence 0000000000 011568888888888888888888875521 22345555554443221
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
... ...+.+|+.+.|.|.+..+.|.+.+.|+|++..+.....
T Consensus 113 ~~~--------------------------------------~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~ 154 (209)
T 1nbq_A 113 VNI--------------------------------------PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPK 154 (209)
T ss_dssp CCC--------------------------------------BSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSS
T ss_pred ccc--------------------------------------ccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccc
Confidence 110 011345666666666545777788889998887754322
Q ss_pred cee------eecCCCeeeEEEcccCCCCCeEEEEEEEecccce--eeEEEEEE
Q psy15667 241 VNV------SDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA--RYSSKLQV 285 (286)
Q Consensus 241 ~~~------~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~--~~~~~L~V 285 (286)
... .........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 155 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 155 STRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp SSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred cceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 100 0011235689999999999999999999999988 44444544
No 93
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.89 E-value=1.8e-22 Score=158.90 Aligned_cols=187 Identities=22% Similarity=0.389 Sum_probs=114.1
Q ss_pred eeEeccccccccCCCcEEEEEE-eecCCC-CeeEEeeCCEEcC--CCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCI-ASGNPT-PDIGWTLDGFELP--TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~-~~g~p~-p~v~W~~~~~~l~--~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.+...+.++.+.+|+++.|.|. +.+.|. +.+.|++++..+. .+.+... .... ..|.|.+++.+|+|.|+
T Consensus 10 ~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~----~~~~---~~L~i~~v~~~d~G~Y~ 82 (201)
T 3s97_C 10 FPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFV----SQTN---GNLYIANVEASDKGNYS 82 (201)
T ss_dssp CCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEE----CTTT---CCEEESSCCGGGCEEEE
T ss_pred cCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEE----EcCC---CeEEECcCCcccCeEEE
Confidence 3334456778999999999999 889999 9999999987764 2222211 1111 13778888888888888
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR 159 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~ 159 (286)
|.+.|..+...... ....+.... . .... .....+.+
T Consensus 83 C~~~~~~~~~~~~~---------------------~~~~~~~~~--~-----------~~~~---~~~p~~~~------- 118 (201)
T 3s97_C 83 CFVSSPSITKSVFS---------------------KFIPLIPIP--E-----------RTTK---PYPADIVV------- 118 (201)
T ss_dssp EEEEEGGGTEEEEC---------------------CCEEEEEEC--C-----------SSCC---CEEEEEEE-------
T ss_pred EEEEecCCCcchhh---------------------cccceeecc--c-----------cccC---CCCCceEe-------
Confidence 88877542221110 000000000 0 0000 00000000
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 239 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~ 239 (286)
..+...+..|+.+.|.|.+.+ .|.+.+.|++++..+....
T Consensus 119 ~~~~~~~~~g~~~~l~C~~~g----------------------------------------~p~p~v~W~~~~~~~~~~~ 158 (201)
T 3s97_C 119 QFKDVYALMGQNVTLECFALG----------------------------------------NPVPDIRWRKVLEPMPSTA 158 (201)
T ss_dssp ECCCEEEETTCCEEEEEEEEE----------------------------------------ESCCEEEEEETTBCCCTTC
T ss_pred cCCceEEecCCcEEEEEEccC----------------------------------------CCCCceEEEeCCCcCCCce
Confidence 011233445555555555443 4556778888888665432
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+.. ....|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 159 --~~~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 159 --EIST---SGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp --EEET---TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred --eecC---CCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 1111 24589999999999999999999999999999999885
No 94
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.89 E-value=2.6e-22 Score=156.59 Aligned_cols=169 Identities=19% Similarity=0.213 Sum_probs=110.8
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|+|... . . .+ ..|.|.+++.+|+|.|+|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-----~------~-~~---~~L~i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 7 PKPSLQALPS-SLVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-----Y------Q-DQ---AVLFIPAMKRSLAGRYRC 69 (184)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECST-TCSEEEEEETTTCC-----E------E-SS---SEEEESSCCGGGCEEEEE
T ss_pred CCCeEEeCCC-ccccCCCcEEEEEeCCC-CCCEEEEEECCccc-----c------C-cc---cEEEECcCChhhCceEEE
Confidence 3688887766 48999999999999988 78899999998651 0 0 11 147899999999999999
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCc
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPY 157 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~ 157 (286)
.|.|..|.... +..+.|.|.. .|.
T Consensus 70 ~a~n~~g~~~~-----------------------------------------------------s~~~~l~V~~~~~~p~ 96 (184)
T 2gi7_A 70 SYQNGSLWSLP-----------------------------------------------------SDQLELVATGVFAKPS 96 (184)
T ss_dssp EEEETTEEBCC-----------------------------------------------------CCCEEEEEESSSCCCE
T ss_pred EEEcCCCccCC-----------------------------------------------------CCCEEEEecCcCCCCE
Confidence 98886542100 0011222211 011
Q ss_pred eecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 158 VRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 158 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
+... +...+.+|+.+.|.|.+. + +++.+.|+|+|..+..
T Consensus 97 i~~~---------------------------------------p~~~v~~G~~v~l~C~~~-~-~~~~~~w~k~g~~~~~ 135 (184)
T 2gi7_A 97 LSAQ---------------------------------------PGPAVSSGGDVTLQCQTR-Y-GFDQFALYKEGDPAPY 135 (184)
T ss_dssp EEEE---------------------------------------CCCSSCCTTCEEEEEECS-S-CCCEEEEEECCCCTTS
T ss_pred EEeC---------------------------------------CCceecCCCcEEEEEEcC-C-CCcEEEEEECCCcCcc
Confidence 1000 112356778888888753 3 3468999999987754
Q ss_pred CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc-----eeeEEEEEE
Q psy15667 238 RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-----ARYSSKLQV 285 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-----~~~~~~L~V 285 (286)
..... .....|.|.++..+|+|.|+|.|.|..+. .+..+.|.|
T Consensus 136 ~~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 136 KNPER-----WYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp CCCCE-----EEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred eecCC-----CceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 22111 12457899999999999999999998643 244455554
No 95
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.89 E-value=1.8e-22 Score=161.09 Aligned_cols=176 Identities=17% Similarity=0.181 Sum_probs=105.6
Q ss_pred cccccccCC--CcEEEEEEeecCCCCeeEEeeC---CEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 9 FIEQTLQPG--PAVSLKCIASGNPTPDIGWTLD---GFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 9 ~~~~~~~~G--~~~~l~C~~~g~p~p~v~W~~~---~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
+..+.+.+| ++++|.|.+.+ |.+.++|+++ +..+..+.++.. ...+ .|.|.+++.+|+|.|+|.|.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~----~~~~----~l~I~~v~~~D~G~Y~C~a~ 84 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISW----DSKK----GFTIPSYMISYAGMVFCEAK 84 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEE----ETTT----EEEEEGGGTTTCSEEEEEEC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccc----cCCc----cEEEccCChhcCceEEEEEE
Confidence 467789999 99999999986 7799999884 666654433321 1111 37788888888888888887
Q ss_pred cCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC--CCcee--
Q psy15667 84 NRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG--LPYVR-- 159 (286)
Q Consensus 84 n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~--~~~~~-- 159 (286)
|..+... +..+.|.|.. .|.+.
T Consensus 85 n~~~~~~------------------------------------------------------s~~~~l~v~~~~~p~~~~~ 110 (213)
T 2x1w_L 85 INDESYQ------------------------------------------------------SIMYIVVVVGYRIYDVVLS 110 (213)
T ss_dssp ----CEE------------------------------------------------------CCCEEEEECBCCEEEEEEE
T ss_pred ECCeeEE------------------------------------------------------EEEEEEEEeCCcccceEEc
Confidence 7321100 0001111111 01011
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 239 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~ 239 (286)
....+.+.+|++++|.|.+.+.|. +++.+.|+++|..+....
T Consensus 111 ~~~~~~v~~G~~v~L~C~~~g~p~--------------------------------------~~~~i~W~~~g~~~~~~~ 152 (213)
T 2x1w_L 111 PSHGIELSVGEKLVLNCTARTELN--------------------------------------VGIDFNWEYPSSKHQHKK 152 (213)
T ss_dssp SCSCEEEETTCCEEEEEEEEECTT--------------------------------------BCCEEEEECSCSSCCSEE
T ss_pred CCCCeEEcCCCCEEEEEEEECCCC--------------------------------------CceEEEEEecCCccceEE
Confidence 111235567777777777766432 223455655555432110
Q ss_pred C-ceeeec------CCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 240 P-VNVSDL------DSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 240 ~-~~~~~~------~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
. ...... ......|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 205 (213)
T 2x1w_L 153 LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 205 (213)
T ss_dssp EEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEE
Confidence 0 000000 011457999999999999999999999999999999987
No 96
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.89 E-value=2.9e-22 Score=160.61 Aligned_cols=180 Identities=16% Similarity=0.148 Sum_probs=107.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|||..+....+... . ..... ...|.|.+++.+|+|.|+|.
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~-~--~~~~~-~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRL-K--FWNET-DPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEEC-C------C-CCEEEECSCCGGGCEEEEEE
T ss_pred CCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccC-C--CCcce-eeEEEEcccccccCEEEEEE
Confidence 688887776 68999999999999987 6789999999865532111000 0 00000 00366677777777777776
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCce
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPYV 158 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~~ 158 (286)
|.|..|... .+..+.|.|.. .|.+
T Consensus 83 a~n~~~~~~-----------------------------------------------------~s~~~~l~V~~~~~~P~i 109 (218)
T 1uct_A 83 YRIGHYRFR-----------------------------------------------------YSDTLELVVTGLYGKPFL 109 (218)
T ss_dssp EEETTTEEE-----------------------------------------------------ECCCEEEEEECSSCCCEE
T ss_pred EEcCCCcee-----------------------------------------------------ecCCEEEEEcCcccCCEE
Confidence 666432110 01112233321 1111
Q ss_pred ecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC
Q psy15667 159 RLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR 238 (286)
Q Consensus 159 ~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~ 238 (286)
...+. ..+.+|+.+.|.|.+. +.|.+.+.|+|+|..+...
T Consensus 110 ~~~p~---------------------------------------~~v~~G~~v~L~C~~~-~~~~~~~~W~k~g~~~~~~ 149 (218)
T 1uct_A 110 SADRG---------------------------------------LVLMPGENISLTCSSA-HIPFDRFSLAKEGELSLPQ 149 (218)
T ss_dssp EESSC---------------------------------------SEECTTCCCEEEEECS-SSCCSEEEEEETTCSSCCS
T ss_pred EeCCC---------------------------------------CccCCCCCEEEEEeCC-CCCCCEEEEEECCCccccc
Confidence 11111 1245666677777432 4566889999999877542
Q ss_pred CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc-----ceeeEEEEEE
Q psy15667 239 FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA-----QARYSSKLQV 285 (286)
Q Consensus 239 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-----~~~~~~~L~V 285 (286)
. . .......|.|.+++.+|+|.|+|.|.|... ..+..+.|.|
T Consensus 150 --~--~-~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 196 (218)
T 1uct_A 150 --H--Q-SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVV 196 (218)
T ss_dssp --E--E-ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEE
T ss_pred --c--c-CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEE
Confidence 1 1 112356899999999999999999998632 3344556665
No 97
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=5.5e-21 Score=148.66 Aligned_cols=164 Identities=23% Similarity=0.355 Sum_probs=104.8
Q ss_pred ccccCCCcEEEEEEeecCCCC--eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEE
Q psy15667 12 QTLQPGPAVSLKCIASGNPTP--DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTC 89 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g~p~p--~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~ 89 (286)
..+.+|++++|.|.+.+.|.| .+.|++++..|....... . ...|.|. ..+|+|.|+|.|.|..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~--------~--~~~l~i~--~~~d~G~Y~C~~~n~~--- 72 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG--------Q--KTEFKVD--SDDQWGEYSCVFLPEP--- 72 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC--------S--EEEEEEC--GGGCCEEEEEEEESTT---
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC--------C--cEEEEEe--chhhCeEEEEEEECCc---
Confidence 467899999999999988777 999999998876543221 0 1124455 5677777777776511
Q ss_pred EEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCC-ceEEec
Q psy15667 90 EITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIP-KVTAID 168 (286)
Q Consensus 90 ~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~ 168 (286)
...+.|.|...|.+...+ ...+..
T Consensus 73 -------------------------------------------------------~~~~~l~V~~~P~~~~~~~~~~~~~ 97 (184)
T 3b5h_A 73 -------------------------------------------------------MGTANIQLHGPPRVKAVKSSEHINE 97 (184)
T ss_dssp -------------------------------------------------------SCEEEEEECCSCCCEESCSEEEECT
T ss_pred -------------------------------------------------------CcEEEEEEecCCceeecCCCcEEcC
Confidence 012334444444332222 223334
Q ss_pred CCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEe---CCe-eCCCC--CCc
Q psy15667 169 GEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLK---DGK-PLSPR--FPV 241 (286)
Q Consensus 169 g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~---~g~-~~~~~--~~~ 241 (286)
|+.+.|.|.+. |.| .+.+.|+| ++. .+... .++
T Consensus 98 g~~~~l~C~~~----------------------------------------g~p~~~~i~W~~~~~~~~~~~~~~~~~~~ 137 (184)
T 3b5h_A 98 GETAMLVCKSE----------------------------------------SVPPVTDWAWYKITDSEDKALMNGSESRF 137 (184)
T ss_dssp TSCEEEEEECC----------------------------------------CSSCCCEEEEEECCSSSCEECCTTGGGTE
T ss_pred CCcEEEEEEEC----------------------------------------CCCCCCeEEEEEcCCCCCEEeecCCCCEE
Confidence 45455555443 344 56777777 333 33222 233
Q ss_pred eeeecCCCeeeEEEcccC-CCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 242 NVSDLDSFSSLLSINSVS-AAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~-~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.+.. ......|.|.++. .+|+|.|+|.|.|..|....++.|.|+
T Consensus 138 ~~~~-~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 138 FVSS-SQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEE-ETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEe-cCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 3332 2334689999999 999999999999999999999999885
No 98
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.88 E-value=5.4e-22 Score=157.59 Aligned_cols=204 Identities=20% Similarity=0.263 Sum_probs=124.4
Q ss_pred EeccccccccCCCcEEEEEEeecCC----CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 6 TYSFIEQTLQPGPAVSLKCIASGNP----TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 6 ~~~~~~~~~~~G~~~~l~C~~~g~p----~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
......+.+.+|++++|.|.+.+.| .+.+.|++++..........+. . .++. .+........|.+.
T Consensus 4 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~---~-~~~~----~~~~~~~~~~~r~~-- 73 (214)
T 3jz7_A 4 TTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIIL---Y-SGDK----IYDNYYPDLKGRVH-- 73 (214)
T ss_dssp --CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEE---E-ETTE----EECCCCGGGTTTEE--
T ss_pred ecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEE---E-eCCe----EccccCCccccceE--
Confidence 3344566889999999999999887 5699999865332211111110 0 0110 01110111112111
Q ss_pred EEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC
Q psy15667 82 AENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI 161 (286)
Q Consensus 82 a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~ 161 (286)
+. .++. ......|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...|.+...
T Consensus 74 ---------~~------------~~~~----~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~ 127 (214)
T 3jz7_A 74 ---------FT------------SNDV----KSGDASINVTNLQLSDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSGTRC 127 (214)
T ss_dssp ---------ES------------CSCG----GGTBCCEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCBSCEE
T ss_pred ---------Ee------------ccCc----cCCcccEEEccCChhhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCCcee
Confidence 10 0000 0123568999999999999999998887754 44566776544422110
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCc
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 241 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~ 241 (286)
. ....+.+|+.+.|.|.+..+.|.+.+.|+|++.........
T Consensus 128 ~--------------------------------------~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~ 169 (214)
T 3jz7_A 128 F--------------------------------------VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPW 169 (214)
T ss_dssp E--------------------------------------EESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGG
T ss_pred e--------------------------------------eecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccc
Confidence 0 01125577888888887668888999999954322111111
Q ss_pred eeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 242 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.. ....+.|.|.++..+|+|.|+|.|.|.+|....++.|.|.
T Consensus 170 ~~---~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 170 LA---EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp GG---GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ee---ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 11 1124589999999999999999999999999999988773
No 99
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.88 E-value=1.3e-22 Score=161.31 Aligned_cols=200 Identities=14% Similarity=0.161 Sum_probs=117.7
Q ss_pred ccccccccCCCcEEEEEEeecCCCCe---eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPD---IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~---v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
.+.++++.+|++++|.|.+.+.|.+. |.|+|++..+.....+.. . .... ..+ .....|.+
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~----~-~~~~---~~~---~~~~~~r~------ 67 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALL----H-SKYG---LHV---SPAYEGRV------ 67 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEE----E-TTTE---EEE---CGGGTTTE------
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEe----c-CCCC---eEe---CccccceE------
Confidence 45567899999999999999988764 899998866532211110 0 0000 000 00001111
Q ss_pred CCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce--ecCC
Q psy15667 85 RAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV--RLIP 162 (286)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~--~~~~ 162 (286)
...... .......|.|.++..+|+|.|.|.+.+..+........+.+...+.. ....
T Consensus 68 -----------------~~~~~~----~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (218)
T 4frw_A 68 -----------------EQPPPP----RNPLDGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGP 126 (218)
T ss_dssp -----------------ECCSSC----CCTTBCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECS
T ss_pred -----------------EEeccc----ccCCeEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeee
Confidence 110000 11234679999999999999999998865544333333333222111 1111
Q ss_pred ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCce
Q psy15667 163 KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVN 242 (286)
Q Consensus 163 ~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~ 242 (286)
. ..+.+|..+.+.|.+. +.|+|.+.|+|++..+.......
T Consensus 127 ~---------------------------------------~~~~~~~~~~~~c~~~-g~p~p~i~W~~~~~~~~~~~~~~ 166 (218)
T 4frw_A 127 A---------------------------------------LEEGQGLTLAASCTAE-GSPAPSVTWDTEVKGTTSSRSFK 166 (218)
T ss_dssp C---------------------------------------EETTCCSEEEEEEEEE-EBSCCEEEEEESSCCEEEEEEEE
T ss_pred e---------------------------------------eeeeeccccceeeecc-CCcCceEEEEECCcccccCceEe
Confidence 1 1234566666666653 56667788888876554322111
Q ss_pred eeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 243 VSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 243 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
..........|.|..++.+|+|.|+|.|.|.+|.....+.|.|
T Consensus 167 ~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 167 HSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp CSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 1101112457999999999999999999999998877777765
No 100
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=1.4e-21 Score=152.96 Aligned_cols=176 Identities=15% Similarity=0.235 Sum_probs=107.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC-eeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN-RFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.|...+.. .+.+|++++|.|.+.+. .+.+.|+|+|..+.... ... .......|.|.+++.+|+|.|+|
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~-------~~~~~~~L~I~~v~~~D~G~Y~C 74 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPP-------ERINKVKFYIPDMNSRMAGQYSC 74 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSC-------TTCCEEEEEESSCCGGGCEEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccC-------CCcceeEEEeCcCCcccCeEEEE
Confidence 6888887766 89999999999998764 47899999998764210 000 00111247788888888888888
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCc
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPY 157 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~ 157 (286)
.+.|..+... .+..+.|.|.. .|.
T Consensus 75 ~~~~~~~~~~-----------------------------------------------------~s~~~~l~V~~~~~~p~ 101 (188)
T 1oll_A 75 IYRVGELWSE-----------------------------------------------------PSNLLDLVVTEMYDTPT 101 (188)
T ss_dssp EEEETTEECC-----------------------------------------------------CCCCEEEEEESCSCCCE
T ss_pred EecCCCCCCC-----------------------------------------------------CCCceEEEecccCCCCe
Confidence 7766432110 00112222211 111
Q ss_pred eecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC
Q psy15667 158 VRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP 237 (286)
Q Consensus 158 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~ 237 (286)
+...+... +.+|+.+.|.|.+. .+++.+.|+|+|..+..
T Consensus 102 i~~~p~~~---------------------------------------v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~~~ 140 (188)
T 1oll_A 102 LSVHPGPE---------------------------------------VISGEKVTFYCRLD--TATSMFLLLKEGRSSHV 140 (188)
T ss_dssp EEEESCSE---------------------------------------EETTCEEEEEEECS--SSCSEEEEEEESSSCEE
T ss_pred EEECCCCc---------------------------------------cccCCEEEEEEEcC--CCCCEEEEEECCccccc
Confidence 11111112 34566666666643 23568899999876532
Q ss_pred CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecc---cceeeEEEEEE
Q psy15667 238 RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA---AQARYSSKLQV 285 (286)
Q Consensus 238 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~---g~~~~~~~L~V 285 (286)
. .. .......|.|.+++.+|+|.|+|.|.|.. ...+..+.|.|
T Consensus 141 ~----~~-~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 141 Q----RG-YGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp E----EE-ECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEE
T ss_pred c----cc-CCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEe
Confidence 1 11 12336789999999999999999999974 23344555655
No 101
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.88 E-value=2.1e-21 Score=153.39 Aligned_cols=74 Identities=14% Similarity=0.313 Sum_probs=46.6
Q ss_pred CCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 208 GARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 208 g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|+.+.|.|.+ .|.|.|.+.|++++..+... ......+....+.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 118 g~~v~l~C~~-~g~P~p~v~W~~~~~~~~~~---~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 118 TGEVQLTCQA-RGYPLAEVSWQNVSVPANTS---HIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp TCCEEEEEEE-EEBSCCEEEETTCCSCCEEE---EEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred CCeEEEEEEc-cccCCceEEEEeCCCCccCc---eeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 4444444444 23455566666655533210 00111122345678899999999999999999999999988876
No 102
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.88 E-value=3e-21 Score=168.09 Aligned_cols=179 Identities=25% Similarity=0.464 Sum_probs=135.2
Q ss_pred ccccccccCCCcEEEEEEe-ecCCCCeeEEeeCCEE-cCCCCeeEeceEEecccceeEEEEEcccccCC-CeEEEEEEEc
Q psy15667 8 SFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFE-LPTNNRFVIGQFVSGHGDVISHVNISHVTVED-GGEYACVAEN 84 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~-l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D-~G~Y~C~a~n 84 (286)
......+.+|++++|.|.+ .+.|.+.+.|++++.. +..+.++... .++ .|.|.++..+| +|.|+|.|.|
T Consensus 122 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~----~l~i~~v~~~d~~G~Y~C~a~n 193 (404)
T 3p3y_A 122 NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG----HNG----DLYFSNVMLQDMQTDYSCNARF 193 (404)
T ss_dssp CCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEEC----TTS----CEEESSCCSGGGSSCBEEEEEC
T ss_pred CCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEc----CCC----cEEEEeeeeccCCcceEEEEEe
Confidence 3345678999999999998 7899999999998754 4444454321 122 37899999999 5999999988
Q ss_pred CCEEE---------EE-----------------------------------ecCCCCCeeEEEeeCCccCcCCC-----C
Q psy15667 85 RAGTC---------EI-----------------------------------TPYDSGPYLIAWFKDGRQIPGRT-----S 115 (286)
Q Consensus 85 ~~g~~---------~~-----------------------------------~~~~~~~~~~~W~~~g~~l~~~~-----~ 115 (286)
..|.. .+ ...+.+++.+.|+++|..+.... .
T Consensus 194 ~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 273 (404)
T 3p3y_A 194 HFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENF 273 (404)
T ss_dssp TTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGG
T ss_pred ccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccccccc
Confidence 65421 11 00112346899999999875432 2
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..+|.+... ....+..|+.+.|.|.+.|.|.|.+.|.+....
T Consensus 274 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~ 352 (404)
T 3p3y_A 274 NKALRITNVSEEDSGEYFCLASNKMGSI-RHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP 352 (404)
T ss_dssp GTEEEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEE
T ss_pred CceEEEccCCHhHCEEEEEEEEeCCCcE-EEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEe
Confidence 4689999999999999999999998875 45778888777665544 346778899999999999999999999986544
Q ss_pred c
Q psy15667 195 I 195 (286)
Q Consensus 195 ~ 195 (286)
+
T Consensus 353 ~ 353 (404)
T 3p3y_A 353 L 353 (404)
T ss_dssp G
T ss_pred c
Confidence 3
No 103
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.88 E-value=1.2e-21 Score=170.11 Aligned_cols=176 Identities=22% Similarity=0.395 Sum_probs=131.5
Q ss_pred cccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEE
Q psy15667 11 EQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTC 89 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~ 89 (286)
.+.+.+|+.+.|.|.+. +.|.+.+.|++++.++..+.+.... ...+ .|.|.+++.+|+|.|+|.|.|..+..
T Consensus 111 ~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~----~~~~---~L~I~~v~~~D~G~Y~C~a~n~~~~~ 183 (384)
T 3kld_A 111 TVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVS----QETG---NLYIAKVEKSDVGNYTCVVTNTVTNH 183 (384)
T ss_dssp CEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEEC----TTTC---CEEESSCCGGGCEEEEEEEEETTTTE
T ss_pred ceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEE----cCCC---cEEEeecCHHHCceEEEEEecccccc
Confidence 45788999999999754 5677899999999988655543321 1111 38899999999999999999865421
Q ss_pred EE------------------------------------------ecCCCCCeeEEEee-CCccCcCC----CCcceEEEc
Q psy15667 90 EI------------------------------------------TPYDSGPYLIAWFK-DGRQIPGR----TSSTSLVIN 122 (286)
Q Consensus 90 ~~------------------------------------------~~~~~~~~~~~W~~-~g~~l~~~----~~~~~l~i~ 122 (286)
.+ ...+.+.+.+.|+| ++..+... .....|.|.
T Consensus 184 ~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~ 263 (384)
T 3kld_A 184 KVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIP 263 (384)
T ss_dssp EEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEEC
T ss_pred eeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEEC
Confidence 10 00012346899999 55555432 234679999
Q ss_pred cCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee-cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 123 PVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR-LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 123 ~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
++..+|+|.|+|.|.|..|.. .....|.|...|.+. ......+..|+.+.|.|.+.|.|.|.+.|.+....
T Consensus 264 ~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~ 335 (384)
T 3kld_A 264 NFQQEDAGSYECVAENSRGKN-VAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDP 335 (384)
T ss_dssp SCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEE
T ss_pred CCChhhCEEEEEEEEcCCCeE-EEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEE
Confidence 999999999999999999875 346788887666543 34457788999999999999999999999986533
No 104
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.88 E-value=3.1e-21 Score=152.77 Aligned_cols=36 Identities=28% Similarity=0.464 Sum_probs=30.2
Q ss_pred eeEeccccccc-cCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 4 ILTYSFIEQTL-QPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 4 ~~~~~~~~~~~-~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
.|.+.+.+.++ .+|++++|.|.+.|.|.|.+.|+++
T Consensus 2 ~v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~ 38 (202)
T 1vca_A 2 KIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQ 38 (202)
T ss_dssp EEEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEET
T ss_pred eEEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECC
Confidence 45667777654 5999999999999999999999884
No 105
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.87 E-value=1e-20 Score=149.83 Aligned_cols=190 Identities=17% Similarity=0.207 Sum_probs=121.2
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
|.+.+....+.+|++++|.|...+.|.+.+.|++++...... .+. .+.. .... ... .....|.
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~-~i~--~~~~-~~~~----~~~--~~~~~~r------- 64 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDK-EIA--RFVP-NSNM----NFT--GQAYSGR------- 64 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGG-EEE--EEEG-GGTE----EEE--CTTCCSS-------
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccc-eEE--EEec-CCCc----ccc--Cccccce-------
Confidence 445566678999999999999888999999999876433211 110 0000 0000 000 0000000
Q ss_pred CCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCce
Q psy15667 85 RAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKV 164 (286)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~ 164 (286)
+.. .....|.|.++..+|+|.|+|.+.+..+........|.|...+.
T Consensus 65 ----------------~~~----------~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~------- 111 (208)
T 3r4d_A 65 ----------------EII----------YSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVT------- 111 (208)
T ss_dssp ----------------EEE----------CTTSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCC-------
T ss_pred ----------------eEE----------ecCCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCC-------
Confidence 111 12246999999999999999999987544334455666643211
Q ss_pred EEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceee
Q psy15667 165 TAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 244 (286)
Q Consensus 165 ~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~ 244 (286)
.|.+.. .+.. +.+|+.+.|.|.+. +.| +.+.|+++|..+....++.+.
T Consensus 112 ------------------~p~i~~-----------~~~~-~~~g~~v~l~C~~~-~~p-p~i~W~~~g~~l~~~~~~~~~ 159 (208)
T 3r4d_A 112 ------------------QPFLQV-----------TNTT-VKELDSVTLTCLSN-DIG-ANIQWLFNSQSLQLTERMTLS 159 (208)
T ss_dssp ------------------CCEEEE-----------SCSS-CCTTCCEEEEEECS-CTT-CEEEEEETTEECCCCSSEEEE
T ss_pred ------------------CCEEec-----------CCce-EeeCCCEEEEEECC-CCC-CceEEEECCEeCCCCCCeEEc
Confidence 011100 0012 66788888888875 344 799999999998766555443
Q ss_pred ecCCCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 245 DLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 245 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
.. +..|.|.++..+|+|.|+|.|.|.+|...+
T Consensus 160 ~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s 191 (208)
T 3r4d_A 160 QN---NSILRIDPIKREDAGEYQCEISNPVSVRRS 191 (208)
T ss_dssp TT---TTEEEESSCCGGGCEEEEEEEECTTCCEEC
T ss_pred CC---CCEEEEeccCHHhCeEEEEEEecCCCcccC
Confidence 22 368999999999999999999999997554
No 106
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.87 E-value=2.5e-21 Score=154.14 Aligned_cols=197 Identities=14% Similarity=0.219 Sum_probs=115.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|.|...+ .+.+.+|++++|.|.+.+.|.+.+.|+|+... ....+... ... .......+.|.-
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~--~~~~~~~~----~~~---------~~~~~~~~r~~~-- 63 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAG--QAPVLVIY----EDN---------RRPSGIPDHFSG-- 63 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTT--SCCEEEEB----TTT---------BCCTTSCTTEEE--
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCC--CCcEEEEE----ECC---------ccCCCccCcEEE--
Confidence 5566566 78999999999999999999999999984210 00111000 000 000000111110
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcC----CC
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGG----LP 156 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~----~~ 156 (286)
. . ......|.|.++..+|+|.|+|.+.|..+. .......|.|.. .|
T Consensus 64 -------------------~--~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P 115 (213)
T 3mj8_L 64 -------------------S--N-------SGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAP 115 (213)
T ss_dssp -------------------E--E-------ETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCC
T ss_pred -------------------E--e-------cCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCC
Confidence 0 0 012356888888888888888888887662 223345566542 22
Q ss_pred ceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeC
Q psy15667 157 YVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPL 235 (286)
Q Consensus 157 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~ 235 (286)
.+...+. ...+.+|+.+.|.|.+....|+ +.+.|+|+|..+
T Consensus 116 ~i~~~~~--------------------------------------~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (213)
T 3mj8_L 116 SVTLFPP--------------------------------------SSEELKTNQATLVCMINGFYPADVAVTWEADGTPI 157 (213)
T ss_dssp EEEEECC--------------------------------------CHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred eEEccCC--------------------------------------CcccccCCcEEEEEEeeceeCCCeEEEEEcCCccc
Confidence 1111100 0112256666777766543343 589999999887
Q ss_pred CCCCCce--eeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 236 SPRFPVN--VSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 236 ~~~~~~~--~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
....... ..... .....|.|..+..+|+|.|+|.|.|..+....++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 209 (213)
T 3mj8_L 158 TQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLSP 209 (213)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEECC
T ss_pred CCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeecc
Confidence 5431100 00000 113568999999999999999999999887776643
No 107
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.86 E-value=4.9e-21 Score=166.33 Aligned_cols=179 Identities=25% Similarity=0.423 Sum_probs=133.8
Q ss_pred ccccccccCCCcEEEEEEe-ecCCCCeeEEeeCC---EEcCC----CCeeEeceEEecccceeEEEEEcccccCCCe---
Q psy15667 8 SFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDG---FELPT----NNRFVIGQFVSGHGDVISHVNISHVTVEDGG--- 76 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~---~~l~~----~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G--- 76 (286)
.+.+..+.+|+.++|.|.+ .+.|.+.+.|++++ .+... +.++.. ...+ .|.|.+++.+|+|
T Consensus 106 ~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~~----~L~i~~v~~~d~G~~~ 177 (395)
T 1bih_A 106 KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA----GPDG----NLYFTIVTKEDVSDIY 177 (395)
T ss_dssp EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEE----CTTS----CEEEEEECGGGCCSSE
T ss_pred CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEE----cCCC----cEEEEEEeeccCCCce
Confidence 3446678899999999996 78999999999986 22211 233322 1122 3889999999999
Q ss_pred EEEEEEEcCCEEEE--E-----e-----------------------------------cCCCCCeeEEEeeCCccCcCCC
Q psy15667 77 EYACVAENRAGTCE--I-----T-----------------------------------PYDSGPYLIAWFKDGRQIPGRT 114 (286)
Q Consensus 77 ~Y~C~a~n~~g~~~--~-----~-----------------------------------~~~~~~~~~~W~~~g~~l~~~~ 114 (286)
.|+|.|.|..|... . . ..+.+++.+.|+|||..+....
T Consensus 178 ~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~ 257 (395)
T 1bih_A 178 KYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNP 257 (395)
T ss_dssp EEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCT
T ss_pred EEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCC
Confidence 99999998766410 0 0 0012345689999998875321
Q ss_pred ----------CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCc--eEEecCCCEEEEeeEeeec
Q psy15667 115 ----------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPK--VTAIDGEGLSIKCPVAGYP 182 (286)
Q Consensus 115 ----------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~--~~~~~g~~~~l~c~~~~~p 182 (286)
....|.|.++..+|+|.|+|.|.|..|......+.|.|..+|.+...+. ..+..|+.+.|.|.+.|.|
T Consensus 258 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p 337 (395)
T 1bih_A 258 EDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLP 337 (395)
T ss_dssp TSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEES
T ss_pred ceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECccc
Confidence 1237999999999999999999999888655578888887777665443 5678999999999999999
Q ss_pred CCeEEEEEcCCc
Q psy15667 183 IEEVHWEKVPPK 194 (286)
Q Consensus 183 ~~~v~w~~~~~~ 194 (286)
.|.+.|.+....
T Consensus 338 ~p~v~W~~~g~~ 349 (395)
T 1bih_A 338 APNVVWSHNAKP 349 (395)
T ss_dssp CCCCEEEETTEE
T ss_pred CCeeEEEECCEE
Confidence 999999986543
No 108
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.86 E-value=2.6e-21 Score=151.24 Aligned_cols=61 Identities=23% Similarity=0.481 Sum_probs=51.7
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
+.+|+.+.|.|.+ |.|.+.|+|+|..+..... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 119 ~~~G~~v~l~C~~----p~p~i~W~k~g~~i~~~~~--------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 119 SRGDGSVLLTCGL----TDKTIKWLKDGSIISPLNA--------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSSCEEEEECSS----SCSCEEEEETTEECCCSSC--------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCCCCeEEEEeeC----CCCeEEEEECCEECcccCC--------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 5689999999976 7789999999998864321 25679999999999999999999999976
No 109
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.86 E-value=1.9e-20 Score=152.44 Aligned_cols=208 Identities=18% Similarity=0.200 Sum_probs=114.6
Q ss_pred EeccccccccCCCcEEEEEEeec---CCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 6 TYSFIEQTLQPGPAVSLKCIASG---NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 6 ~~~~~~~~~~~G~~~~l~C~~~g---~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
...+.++.+.+|++++|.|.+.+ .|.+.+.|++++.... ...+. . ++ ....+....+.|
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~---~~~~~---~--~~----~~~~~~~~~~~~------ 67 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDR---STKVF---K--GN----YNWQGEGLGFVE------ 67 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTE---EEEEE---E--EE----ECCCBTTBCCCT------
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCc---cEEEE---e--ec----cccccccccccc------
Confidence 33444678999999999999998 8899999999864321 11100 0 00 000000000000
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcce----eeeeeEEEEcCC---
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDV----AQGSAELQLGGL--- 155 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~----~~~~~~l~v~~~--- 155 (286)
........+. +++...+.. .....|.|.++.++|+|.|+|.+.|..+.. ....+.|.|...
T Consensus 68 --~~~~~~~~~~---------~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~ 135 (250)
T 2fbo_J 68 --SDSYKESFGD---------FLGRASVAN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPS 135 (250)
T ss_dssp --TSEEEEECGG---------GTTTEECSC-TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCC
T ss_pred --cccccccCCC---------cCceEEecc-CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCC
Confidence 0000000000 000011111 124579999999999999999999976642 123566777543
Q ss_pred CceecCC--ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCe
Q psy15667 156 PYVRLIP--KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGK 233 (286)
Q Consensus 156 ~~~~~~~--~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~ 233 (286)
+.+.... ...+.+|+.+.|.|.+.+. |.|.+.|+|++.
T Consensus 136 ~~~~~~~~~~~~v~~g~~v~L~C~~~g~----------------------------------------p~p~v~W~k~~~ 175 (250)
T 2fbo_J 136 NNVHVSTAEVVQVDEGNDITMTCPCTDC----------------------------------------ANANVTWYTGPT 175 (250)
T ss_dssp SCCEECCCSEEECCTTCCEEECCCEESC----------------------------------------TTCEEEEEEEEE
T ss_pred CeEEEecCceEEecCCCcEEEEEEecCC----------------------------------------CCCeeEEEeCCC
Confidence 1221111 1223345555555554444 444556666655
Q ss_pred eCCCCC----------------------CceeeecCCCeeeEEEcccCCCCCeEEEEEEEe---cccceeeEEEEEE
Q psy15667 234 PLSPRF----------------------PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASN---TAAQARYSSKLQV 285 (286)
Q Consensus 234 ~~~~~~----------------------~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N---~~g~~~~~~~L~V 285 (286)
.+.... ...... .....|.|.++..+|+|.|+|.|.| ..|....++.|.|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 176 FFENYETGTYQPLANKNQFGITWFSSEIAGRASF--SGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp CSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEE--ETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred cccccccCcceeEeccCCCCccccCceEeccccc--CCccEEEEecCCcccCEEEEEEecCCccccCccceeEEEeC
Confidence 443211 011110 0135899999999999999999999 6667777777665
No 110
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.86 E-value=4.5e-21 Score=149.29 Aligned_cols=174 Identities=15% Similarity=0.203 Sum_probs=108.0
Q ss_pred ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEEE
Q psy15667 12 QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCEI 91 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~~ 91 (286)
+.+.+|++++|.|.+.+.|.+.+.|++++..+.... .... +...... -.+ ....
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~----------~~~~---~~~~~~~--~~~-----------r~~~ 58 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGN----------QGSF---LTKGPSK--LND-----------RADS 58 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEE----------ETTE---EEECSCT--TGG-----------GEEC
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEe----------cCce---EecCChh--hCC-----------cccc
Confidence 468899999999999999999999999975311000 0000 0000000 000 0000
Q ss_pred ecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCC
Q psy15667 92 TPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEG 171 (286)
Q Consensus 92 ~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~ 171 (286)
. . ..+ ......|.|.++..+|+|.|+|.+.|..+ .+.|.|.. +...+...
T Consensus 59 ~------------~--~~~--~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~-----~~~l~V~~---~~~~~~~~------ 108 (184)
T 2ny1_B 59 R------------R--SLW--DQGNFPLIIKNLKIEDSDTYICEVEDQKE-----EVQLLVFG---LTANSDTH------ 108 (184)
T ss_dssp C------------G--GGG--GGTBCCEEECSCCGGGCEEEEEEETTEEE-----EEEEEEEE---EEESSCSE------
T ss_pred c------------c--ccc--cCCeEEEEEecCCHHHCEEEEEEEEcCCC-----cEEEEEEE---ecCCCCce------
Confidence 0 0 000 01124588888888888888888876532 23344421 11111112
Q ss_pred EEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCee
Q psy15667 172 LSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSS 251 (286)
Q Consensus 172 ~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~ 251 (286)
+.+|+.+.|.|.+. +.|.+.+.|++++..+. ....
T Consensus 109 ---------------------------------v~~g~~~~l~C~~~-~~p~~~v~W~~~~~~~~-----------~~~~ 143 (184)
T 2ny1_B 109 ---------------------------------LLQGQSLTLTLESP-PGSSPSVQCRSPRGKNI-----------QGGK 143 (184)
T ss_dssp ---------------------------------EETTCCEEEEEECC-TTCCCEEEEECTTSCEE-----------EESS
T ss_pred ---------------------------------eecCCCEEEEEEcC-CCCCCEEEEEeCCCccc-----------cCce
Confidence 34566666666654 35788899998876431 1145
Q ss_pred eEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 252 LLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 252 ~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 144 ~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 144 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 79999999999999999999999999999998873
No 111
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.86 E-value=4.3e-21 Score=166.36 Aligned_cols=208 Identities=22% Similarity=0.333 Sum_probs=144.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCC---CeeEEeeCCEEcCC-----CCeeEeceEEecccceeEEEEEcccccC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPT---PDIGWTLDGFELPT-----NNRFVIGQFVSGHGDVISHVNISHVTVE 73 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~---p~v~W~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~l~I~~~~~~ 73 (286)
+|.|...+.+..+.+|+.++|.|.+.+.|. +.+.|++++..+.. +.++.. ...+ .|.|.+++.+
T Consensus 103 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~----~L~i~~v~~~ 174 (388)
T 2v5m_A 103 AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLV----LPSG----ELHIREVGPE 174 (388)
T ss_dssp CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEE----CTTS----CEEESSCCGG
T ss_pred ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEE----ccCC----cEEEecCCcc
Confidence 456666677778999999999999988653 78999999876632 233322 1122 3889999999
Q ss_pred CC-eEEEEEEEcCCE-E---------EEEe-------c------------------------CCCCCeeEEEeeCCccCc
Q psy15667 74 DG-GEYACVAENRAG-T---------CEIT-------P------------------------YDSGPYLIAWFKDGRQIP 111 (286)
Q Consensus 74 D~-G~Y~C~a~n~~g-~---------~~~~-------~------------------------~~~~~~~~~W~~~g~~l~ 111 (286)
|+ |.|+|.|.|..+ . ..+. + .+.+++.+.|+|++..+.
T Consensus 175 d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~ 254 (388)
T 2v5m_A 175 DGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTT 254 (388)
T ss_dssp GGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSS
T ss_pred ccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCc
Confidence 99 999999988642 1 1110 0 001345799999865432
Q ss_pred C--------C--CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecC-CceEEecCCCEEEEeeEee
Q psy15667 112 G--------R--TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLI-PKVTAIDGEGLSIKCPVAG 180 (286)
Q Consensus 112 ~--------~--~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~-~~~~~~~g~~~~l~c~~~~ 180 (286)
. + .....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..+|.+... ....+..|+.+.|.|.+.|
T Consensus 255 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g 333 (388)
T 2v5m_A 255 RKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGE-SVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTG 333 (388)
T ss_dssp CEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEE
T ss_pred ccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCce-eEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEecc
Confidence 1 1 124679999999999999999999999875 45678888766654433 3466788999999999999
Q ss_pred ecCCeEEEEEcCCccccc--ccccCCCCCCCeEEEEEeee
Q psy15667 181 YPIEEVHWEKVPPKIESF--AFPFDGLPEGARTRVICGVT 218 (286)
Q Consensus 181 ~p~~~v~w~~~~~~~~~~--~~~~~~~~~g~~~~l~c~~~ 218 (286)
.|.|.+.|.+....+... ......+...+.....|.+.
T Consensus 334 ~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~ 373 (388)
T 2v5m_A 334 NPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVR 373 (388)
T ss_dssp ECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEE
T ss_pred ccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEE
Confidence 999999999965433211 01112234445556667653
No 112
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.86 E-value=4.1e-21 Score=148.75 Aligned_cols=112 Identities=15% Similarity=0.265 Sum_probs=77.5
Q ss_pred eEEEccCCCCCCeeEEEEEEcCCcce-eeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccc
Q psy15667 118 SLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIE 196 (286)
Q Consensus 118 ~l~i~~v~~~d~G~Y~C~a~~~~g~~-~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~ 196 (286)
.|.|.++.++|+|.|+|.+.|..|.. ....+.|.|...+. .|.+..
T Consensus 62 sL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~-------------------------~p~i~~-------- 108 (176)
T 1hng_A 62 DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVS-------------------------KPMIYW-------- 108 (176)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCC-------------------------CCEEEE--------
T ss_pred cEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCC-------------------------CCEEEe--------
Confidence 48889999999999999998887764 23345666543211 011110
Q ss_pred ccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 197 SFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 197 ~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
.+..+.|.|.+. |.|+|.+.|+|+|..+.... .+.|..+..+|+|.|+|.|.|.+|.
T Consensus 109 ----------~~~~v~L~C~~~-g~p~p~i~W~~~g~~l~~~~------------~~~i~~~~~~d~G~Y~C~a~N~~g~ 165 (176)
T 1hng_A 109 ----------ECSNATLTCEVL-EGTDVELKLYQGKEHLRSLR------------QKTMSYQWTNLRAPFKCKAVNRVSQ 165 (176)
T ss_dssp ----------ETTTTEEEEECS-SCSSCEEEEEETTEEEEEES------------SSEEEEECSCCSSCEEEEEEETTEE
T ss_pred ----------cCCcEEEEEEec-CCCCcEEEEEECCEECCCCC------------cEEEEEEEccCCeEEEEEEEecCCC
Confidence 112356777654 55668999999998764321 2456688899999999999999999
Q ss_pred eeeEEEEEE
Q psy15667 277 ARYSSKLQV 285 (286)
Q Consensus 277 ~~~~~~L~V 285 (286)
....+.|.+
T Consensus 166 ~~~~~~l~~ 174 (176)
T 1hng_A 166 ESEMEVVNC 174 (176)
T ss_dssp EEEEECCCC
T ss_pred ceecccccC
Confidence 988887754
No 113
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.85 E-value=1.3e-20 Score=149.95 Aligned_cols=195 Identities=22% Similarity=0.321 Sum_probs=113.1
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccc-cCC--CeEEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVT-VED--GGEYAC 80 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~-~~D--~G~Y~C 80 (286)
.|...+..+.+.+|++++|.|.+.+.|.+.+.|+|++... ...+. +.... ..+ .+.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~--~~~~~----------------~~~~~~~~~~~~~r~-- 62 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHE--SPRLL----------------IKYASQSISGIPSRF-- 62 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTS--CCEEE----------------EETTTEECTTSCTTE--
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCC--CcEEE----------------EEEcccccccccccE--
Confidence 3555677889999999999999999999999999863211 01110 00000 000 0111
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCc
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPY 157 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~ 157 (286)
....+ .....|.|.++..+|+|.|+|.+.|..+........|.|.. .|.
T Consensus 63 ---------------------~~~~~-------~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~ 114 (213)
T 3d9a_L 63 ---------------------SGSGS-------GTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPT 114 (213)
T ss_dssp ---------------------EEEEE-------TTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCE
T ss_pred ---------------------EEEcC-------CCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCce
Confidence 00000 12246888888888888888888876654322234555532 121
Q ss_pred eecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCC
Q psy15667 158 VRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLS 236 (286)
Q Consensus 158 ~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~ 236 (286)
+...+. .....+|+.+.|.|.+....|++ .+.|+|+|..+.
T Consensus 115 v~~~~~--------------------------------------~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 156 (213)
T 3d9a_L 115 VSIFPP--------------------------------------SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 156 (213)
T ss_dssp EEEECC--------------------------------------CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eEeECC--------------------------------------ChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCc
Confidence 111000 00112455666666665434444 789999998775
Q ss_pred CC-CC-ceeeecCC----CeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 237 PR-FP-VNVSDLDS----FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 237 ~~-~~-~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
.. .. ........ ....|.|.++..+|+|.|+|.|.|..........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 210 (213)
T 3d9a_L 157 NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN 210 (213)
T ss_dssp TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEEE
T ss_pred ceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEec
Confidence 54 10 00000000 134899999999999999999999987765555554
No 114
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.85 E-value=3.1e-20 Score=147.55 Aligned_cols=194 Identities=22% Similarity=0.333 Sum_probs=109.2
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
|.. +..+.+.+|++++|.|.+.+.|.+.+.|+|++..- ...+. +.. + +.+. .
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~--~~~~~----------------~~~----~-~~~~----~ 55 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQ--QPKLL----------------IYK----A-SNLA----S 55 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTS--CCEEE----------------EET----T-TEEC----T
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCC--CeEEE----------------EEc----c-cccc----C
Confidence 444 77789999999999999999999999999853110 00110 000 0 0000 0
Q ss_pred CCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC---CceecC
Q psy15667 85 RAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL---PYVRLI 161 (286)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~---~~~~~~ 161 (286)
.. +..+.... ......|.|.++.++|+|.|+|.+.|..+........|.|... |.+...
T Consensus 56 --------~~---~~r~~~~~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~ 117 (210)
T 1lk3_L 56 --------GV---PARFSGSG-------SGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIF 117 (210)
T ss_dssp --------TC---CTTEEEEE-------ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEE
T ss_pred --------Cc---cccEEEEe-------cCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEE
Confidence 00 00000000 0122468888888888888888887765533222334555321 111110
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCC-C
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPR-F 239 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~-~ 239 (286)
+ +...+.+|+.+.|.|.+....|+ +.+.|+|+|..+... .
T Consensus 118 ~--------------------------------------~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~ 159 (210)
T 1lk3_L 118 P--------------------------------------PSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVL 159 (210)
T ss_dssp C--------------------------------------CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEE
T ss_pred C--------------------------------------CchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCce
Confidence 0 00011256667777766543444 489999999887644 1
Q ss_pred C-ceeeecCC----CeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 240 P-VNVSDLDS----FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 240 ~-~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
. ........ ....|.|..+..+|+|.|+|.|.|.......+..
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 207 (210)
T 1lk3_L 160 DSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKS 207 (210)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEEEE
T ss_pred EccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCeeeee
Confidence 0 00000000 1237999999999999999999998775544443
No 115
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.85 E-value=5e-20 Score=145.58 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+. ..+.+|++++|.|.+. .|.+.+.|+|||..+....+. ... . .......|.|.+++.+|+|.|+|.
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~--~~~-~-~~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLI--GEH-H-DGVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEE--CEE-E-TTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceee--eec-C-CCCceEEEEeccCCcccCeEEEEe
Confidence 677776664 7889999999999997 478899999998765321110 000 0 011112466777777777777776
Q ss_pred EEc
Q psy15667 82 AEN 84 (286)
Q Consensus 82 a~n 84 (286)
|.|
T Consensus 82 a~~ 84 (201)
T 1nkr_A 82 GSV 84 (201)
T ss_dssp EEB
T ss_pred Eec
Confidence 655
No 116
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.85 E-value=3.1e-20 Score=148.12 Aligned_cols=204 Identities=15% Similarity=0.162 Sum_probs=118.6
Q ss_pred ccccccccCCCcEEEEEEeecCCCCe---eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPD---IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~---v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
.+.++.+..|++++|.|.+.+.|.+. |.|+|++..+... + . .... ..+......+..
T Consensus 7 vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~--~------~-~~~~---~~~~~~~~~~~~-------- 66 (225)
T 4fmk_A 7 VLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAA--F------H-PSFG---VDFPNSQFSKDR-------- 66 (225)
T ss_dssp CCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEE--E------E-TTTE---EECCCTTSCTTT--------
T ss_pred eCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEE--E------e-cccc---eeeccccccccc--------
Confidence 45667889999999999999887764 8899986443100 0 0 0000 111111111110
Q ss_pred CCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCce
Q psy15667 85 RAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKV 164 (286)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~ 164 (286)
....+.............|.|.++..+|+|.|+|.+.|..+........+.+...+.....+
T Consensus 67 ----------------~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 128 (225)
T 4fmk_A 67 ----------------LSFVRARPETNADLRDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEA-- 128 (225)
T ss_dssp ----------------EEECCCSCSCCSSCCBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEE--
T ss_pred ----------------eeeeccccccccccCcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecc--
Confidence 11111111111123456799999999999999999998766543333333333222111000
Q ss_pred EEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceee
Q psy15667 165 TAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVS 244 (286)
Q Consensus 165 ~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~ 244 (286)
.......++...+.|.+..+.|++.+.|++++..+.........
T Consensus 129 ------------------------------------~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~ 172 (225)
T 4fmk_A 129 ------------------------------------QEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGI 172 (225)
T ss_dssp ------------------------------------CCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECS
T ss_pred ------------------------------------cceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEe
Confidence 01224456667777777777888888898887644221111100
Q ss_pred ecCC--CeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 245 DLDS--FSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 245 ~~~~--~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.... ..+.|.|..+..+|+|.|+|.|.|.+|....++.++|
T Consensus 173 ~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 173 QAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp STTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 0000 1346999999999999999999999987766555543
No 117
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.85 E-value=1.8e-18 Score=155.68 Aligned_cols=272 Identities=19% Similarity=0.331 Sum_probs=160.8
Q ss_pred ccccccccCCCcEEEEEEeecCCC----CeeEEeeC--CEEc----C------------CCCeeEeceEEecccceeEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPT----PDIGWTLD--GFEL----P------------TNNRFVIGQFVSGHGDVISHV 65 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~----p~v~W~~~--~~~l----~------------~~~~~~~~~~~~~~~~~~~~l 65 (286)
.+..+++.+|++++|.|.+.+.+. +.+.|+++ |..+ . ...|+.... . ......+|
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~--~-~~~~~~sL 82 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISV--D-TSRNQFSL 82 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEe--c-CCCCEEEE
Confidence 456778999999999999987543 67999985 3211 0 023443211 0 11112469
Q ss_pred EEcccccCCCeEEEEEEEcCCE-------------------EEEEe------c----C--------------------CC
Q psy15667 66 NISHVTVEDGGEYACVAENRAG-------------------TCEIT------P----Y--------------------DS 96 (286)
Q Consensus 66 ~I~~~~~~D~G~Y~C~a~n~~g-------------------~~~~~------~----~--------------------~~ 96 (286)
.|.+++.+|+|.|.|.+.+..+ ...+. | . +.
T Consensus 83 ~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~ 162 (512)
T 1zvo_C 83 NLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGY 162 (512)
T ss_pred EECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEee
Confidence 9999999999999999987531 01111 0 0 00
Q ss_pred -C-CeeEEEeeCCccCcC------CC------CcceEEEccCCCCCCeeEEEEEEcCCcceeeee----------eEEEE
Q psy15667 97 -G-PYLIAWFKDGRQIPG------RT------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGS----------AELQL 152 (286)
Q Consensus 97 -~-~~~~~W~~~g~~l~~------~~------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~----------~~l~v 152 (286)
+ |..++|++++..... .. ..+.|.|.....+ +|.|+|.+.|..+...... ..+.+
T Consensus 163 ~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l 241 (512)
T 1zvo_C 163 HPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVP 241 (512)
T ss_pred ecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEE
Confidence 1 237999997653210 00 1134788887777 9999999999877542211 01222
Q ss_pred cC----------------------------------------------------CCceecC-Cc-eEEecCCCEEEEeeE
Q psy15667 153 GG----------------------------------------------------LPYVRLI-PK-VTAIDGEGLSIKCPV 178 (286)
Q Consensus 153 ~~----------------------------------------------------~~~~~~~-~~-~~~~~g~~~~l~c~~ 178 (286)
.. .|.+... +. ..+..|+.++|.|.+
T Consensus 242 ~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v 321 (512)
T 1zvo_C 242 TAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFV 321 (512)
T ss_pred eCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEE
Confidence 21 1222111 11 234579999999999
Q ss_pred eeecCC--eEEEEEcCCccc------------c-----------------------cccccC------------------
Q psy15667 179 AGYPIE--EVHWEKVPPKIE------------S-----------------------FAFPFD------------------ 203 (286)
Q Consensus 179 ~~~p~~--~v~w~~~~~~~~------------~-----------------------~~~~~~------------------ 203 (286)
.|.+++ .|.|.+....+. . |.....
T Consensus 322 ~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~~~~~~~~~~~ 401 (512)
T 1zvo_C 322 VGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQRLMALREPAAQAP 401 (512)
T ss_pred eceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCCceeEEeecCCCCC
Confidence 996443 899988422110 0 000000
Q ss_pred -----CCC----CCCeEE-EEEeeecCCCC-CeEEEEeCCeeCCCCCCc--eeeecCCC-----eeeEEEcccCCCCCeE
Q psy15667 204 -----GLP----EGARTR-VICGVTHGDPP-LTIRWLKDGKPLSPRFPV--NVSDLDSF-----SSLLSINSVSAAHSGE 265 (286)
Q Consensus 204 -----~~~----~g~~~~-l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~--~~~~~~~~-----~~~L~i~~v~~~d~G~ 265 (286)
.+. +|+.+. |.|.+....|+ ..+.|+|+|..+...... .+...... ...|.|.....+|.|.
T Consensus 402 ~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~ 481 (512)
T 1zvo_C 402 VKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPAT 481 (512)
T ss_pred CCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCe
Confidence 000 367788 99998754554 478999999988653211 11111111 2356677777777999
Q ss_pred EEEEEEecccceeeEEEE
Q psy15667 266 YTCVASNTAAQARYSSKL 283 (286)
Q Consensus 266 Y~C~a~N~~g~~~~~~~L 283 (286)
|+|.|.|........+..
T Consensus 482 YtC~v~h~~l~~~~~~~~ 499 (512)
T 1zvo_C 482 YTCVVSHEDSRTLLNASR 499 (512)
T ss_pred EEEEEEecCCCCceEEEE
Confidence 999999987654444443
No 118
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.85 E-value=8.2e-21 Score=150.60 Aligned_cols=74 Identities=20% Similarity=0.368 Sum_probs=55.5
Q ss_pred CCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC-CceeeecCCCeeeEEEccc-CCCCCeEEEEEEEecccc-eeeEEEE
Q psy15667 207 EGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF-PVNVSDLDSFSSLLSINSV-SAAHSGEYTCVASNTAAQ-ARYSSKL 283 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N~~g~-~~~~~~L 283 (286)
+|+.+.|.|. +.|.+.+.|+|+|..+.... ...+... ++.|.|.++ ..+|+|.|+|.|.|..|. .+....|
T Consensus 127 ~G~~v~L~C~---g~p~p~i~W~k~~~~l~~~~~~~~~~~~---~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l 200 (204)
T 1sy6_A 127 SGTTVILTCP---QYPGSEILWQHNDKNIGGDEDDKNIGSD---EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYL 200 (204)
T ss_dssp ETTEEEEECS---CCCSSCEEEEETTEEESCCTTCTTEEEE---TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEE
T ss_pred cCCcEEEEcC---CCCCCceEEEECCEECCCccCCceEecC---CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEE
Confidence 5777777776 56778899999998875432 1222111 468999999 999999999999999996 3666667
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|+
T Consensus 201 ~~~ 203 (204)
T 1sy6_A 201 RAR 203 (204)
T ss_dssp EEC
T ss_pred EEe
Confidence 664
No 119
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.84 E-value=4e-20 Score=160.01 Aligned_cols=178 Identities=22% Similarity=0.347 Sum_probs=132.2
Q ss_pred cccccccCCCcEEEEEEe-ecCCCCeeEEeeCCEEcC--CCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 9 FIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFELP--TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~l~--~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.....+.+|+.++|.|.+ .+.|.+.+.|++++.++. .+.+.... ... ..|.|.+++.+|+|.|+|.|.|.
T Consensus 108 ~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~----~~~---~~L~i~~~~~~d~G~Y~C~~~n~ 180 (382)
T 1cs6_A 108 RDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVS----QTT---GNLYIAKTEASDLGNYSCFATSH 180 (382)
T ss_dssp CCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEEC----TTT---CCEEESSCCGGGCEEEEEEEEEE
T ss_pred CCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEe----cCc---eEEEEEeeCcccCeeEEEEEEEc
Confidence 345578899999999985 467889999999987643 33443221 111 14889999999999999999886
Q ss_pred CE----EE-----EEe----------c------------------------CCCCCeeEEEeeCCccCcCC--CCcceEE
Q psy15667 86 AG----TC-----EIT----------P------------------------YDSGPYLIAWFKDGRQIPGR--TSSTSLV 120 (286)
Q Consensus 86 ~g----~~-----~~~----------~------------------------~~~~~~~~~W~~~g~~l~~~--~~~~~l~ 120 (286)
.| .. .+. | ...+.+.+.|++++..+... .....|.
T Consensus 181 ~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~ 260 (382)
T 1cs6_A 181 IDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLH 260 (382)
T ss_dssp ETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEE
T ss_pred cccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEE
Confidence 52 11 000 0 00123579999988876542 3457899
Q ss_pred EccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec-CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 121 INPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL-IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 121 i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
|.++..+|+|.|+|.+.|..|.. ...+.|.|..+|.+.. .....+..|+.+.|.|.+.|.|.|.+.|.+....
T Consensus 261 i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~ 334 (382)
T 1cs6_A 261 IQNVDFEDEGTYECEAENIKGRD-TYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQP 334 (382)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEE
T ss_pred EccCChhhCEEEEEEEEcCCCeE-EEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEE
Confidence 99999999999999999998875 4567888876665543 3456778999999999999999999999986533
No 120
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.84 E-value=1.8e-19 Score=145.86 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=30.9
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
.|...+.++.+.+|++++|.|. .+.|.+.+.|+|+
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~ 36 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQ 36 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEE
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEE
Confidence 4566778889999999999999 7889999999986
No 121
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.84 E-value=6.8e-20 Score=149.92 Aligned_cols=198 Identities=22% Similarity=0.317 Sum_probs=109.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCC-----CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNP-----TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
+|.|...+.++.+.+|++++|.|.+.+.| .+.+.|+|++..- ...+. +........+
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~--~~~~~----------------~~~~~~~~~~ 99 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQ--SPKRL----------------IYLVSKLDSG 99 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTS--CCEEE----------------EETTTEECTT
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCC--CceEE----------------EEeccccCCC
Confidence 56677778888999999999999999988 4899999853110 00110 0000000000
Q ss_pred EEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC--
Q psy15667 77 EYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG-- 154 (286)
Q Consensus 77 ~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~-- 154 (286)
. +..+.... ......|.|.++..+|+|.|+|.+.|..+........|.|..
T Consensus 100 ------------------~--~~r~~~~~-------~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~ 152 (254)
T 2c1o_A 100 ------------------D--PDRFTGSG-------SGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD 152 (254)
T ss_dssp ------------------C--CTTEEEEE-------ETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC
T ss_pred ------------------c--cceEEEec-------CCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC
Confidence 0 00011000 012246777888888888888888776443222223455432
Q ss_pred -CCceecC-CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeC
Q psy15667 155 -LPYVRLI-PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKD 231 (286)
Q Consensus 155 -~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~ 231 (286)
.|.+... +... ..+|+.+.|.|.+....|+ +.+.|+|+
T Consensus 153 ~~P~v~~~~~~~~---------------------------------------~~~g~~v~l~C~~~g~~p~~~~v~W~k~ 193 (254)
T 2c1o_A 153 AAPTVSIFPPSSE---------------------------------------QLTSGGASVVCFLNNFYPKDINVKWKID 193 (254)
T ss_dssp BCCEEEEECCCHH---------------------------------------HHHTTEEEEEEEEEEEBSSCCEEEEEES
T ss_pred CCCeeEeecCChh---------------------------------------hccCCcEEEEEEEecccCCCcEEEEEEC
Confidence 1211110 0000 1134456666665432333 56889998
Q ss_pred CeeCCCC--CCceeeecC----CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 232 GKPLSPR--FPVNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 232 g~~~~~~--~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
|..+... ......... .....|.|.++..+|+|.|+|.|.|..........+
T Consensus 194 g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 251 (254)
T 2c1o_A 194 GSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 251 (254)
T ss_dssp SSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEEEEE
T ss_pred CCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCCcceEec
Confidence 8877544 101100000 014579999999999999999999998765444443
No 122
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.84 E-value=3.3e-20 Score=163.44 Aligned_cols=193 Identities=19% Similarity=0.346 Sum_probs=127.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.|..........+|+.++|.|.+.| .|.+ .|+|+|||..+...............+. ....|.|.++..+|+|.
T Consensus 116 ~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 195 (438)
T 1qgc_4 116 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 195 (438)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCe
Confidence 677776555555557889999999987 7877 9999999999875422111000001111 12358999999999999
Q ss_pred EEEEEEcCCEE--EE--Ee---------------------------cCCCC--CeeEEEeeC--CccCc-----------
Q psy15667 78 YACVAENRAGT--CE--IT---------------------------PYDSG--PYLIAWFKD--GRQIP----------- 111 (286)
Q Consensus 78 Y~C~a~n~~g~--~~--~~---------------------------~~~~~--~~~~~W~~~--g~~l~----------- 111 (286)
|+|.|.|..+. .. +. ..+.+ .+.+.|+|+ |+.+.
T Consensus 196 Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~ 275 (438)
T 1qgc_4 196 YTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTY 275 (438)
T ss_dssp EEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCC
T ss_pred EEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCc
Confidence 99999997653 11 10 00112 357999997 54331
Q ss_pred --------CC--------CCcceEEEccCCCCCCeeEEEEEEcCCcc----eeeeeeEEEEcC----CCceec-CCceEE
Q psy15667 112 --------GR--------TSSTSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLGG----LPYVRL-IPKVTA 166 (286)
Q Consensus 112 --------~~--------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~----~~~~~~~l~v~~----~~~~~~-~~~~~~ 166 (286)
.+ .....|.|.++..+|+|.|+|.|.|..+. .......|.|.. .|.+.. .+...+
T Consensus 276 ~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~ 355 (438)
T 1qgc_4 276 TYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAA 355 (438)
T ss_dssp EECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGG
T ss_pred eecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCccccc
Confidence 11 11247999999999999999999984431 111235666653 233322 223345
Q ss_pred ecCCCEEEEeeEeee-cCC-eEEEEEcCCc
Q psy15667 167 IDGEGLSIKCPVAGY-PIE-EVHWEKVPPK 194 (286)
Q Consensus 167 ~~g~~~~l~c~~~~~-p~~-~v~w~~~~~~ 194 (286)
..|+.++|.|.+.|. |.| .+.|.+....
T Consensus 356 ~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~ 385 (438)
T 1qgc_4 356 AAASMVTLGCLVKGYFPEPVTVTWNSGSLS 385 (438)
T ss_dssp CCSSEEEEEEEEESCBSSCCEEEEGGGTCC
T ss_pred ccCCcEEEEEEeccccCCCcEEEEecCCCC
Confidence 679999999999997 887 8999886544
No 123
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=1.4e-19 Score=147.21 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=52.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC-CeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN-NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.|...+.. ++.+|++|+|.|.+.+ +.+.+.|+|+|..+... .+.. .......|.|.+++.+|+|.|+|
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~-------~~~~~~~L~I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPP-------ERINKVKFYIPDMNSRMAGQYSC 77 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSC-------TTCCEEEEEECSCCGGGCEEEEE
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCcccccccccc-------CCcceeEEEecCCCcccCeEEEE
Confidence 6788877776 8999999999999875 45689999999876411 0000 00111247788888888888888
Q ss_pred EEEcC
Q psy15667 81 VAENR 85 (286)
Q Consensus 81 ~a~n~ 85 (286)
.+.|.
T Consensus 78 ~~~~~ 82 (242)
T 1p6f_A 78 IYRVG 82 (242)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 77653
No 124
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.84 E-value=8.9e-19 Score=145.32 Aligned_cols=162 Identities=28% Similarity=0.486 Sum_probs=118.2
Q ss_pred ccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCC--------CcceEEEccCCCCCCeeEEEEEEcCCcc
Q psy15667 71 TVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRT--------SSTSLVINPVGREDRGIYQCIARRSDGD 142 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~--------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~ 142 (286)
...+.-...|.+... +++.+.|+|+|..+.... ....|.|.++..+|+|.|+|.+.|..|.
T Consensus 18 ~~G~~v~l~C~~~g~-----------p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~ 86 (284)
T 2rik_A 18 ALGESGTFKCHVTGT-----------APIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGK 86 (284)
T ss_dssp ETTCCEEEEEEEESS-----------SCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred cCCCcEEEEEEEEcC-----------CCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCce
Confidence 345566788877642 346899999999875421 2467999999999999999999998876
Q ss_pred eeeeeeEEEEcCCCceecC--CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecC
Q psy15667 143 VAQGSAELQLGGLPYVRLI--PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHG 220 (286)
Q Consensus 143 ~~~~~~~l~v~~~~~~~~~--~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 220 (286)
. ...+.|.|..+|.+... +...+. +|+.+.|.|.+. |
T Consensus 87 ~-~~~~~l~V~~~p~~~~~~~~~~~v~---------------------------------------~g~~~~l~C~~~-g 125 (284)
T 2rik_A 87 D-SCSAQLGVQEPPRFIKKLEPSRIVK---------------------------------------QDEHTRYECKIG-G 125 (284)
T ss_dssp E-EEEEEEEEECCCEEEECCCSEEEEE---------------------------------------TTCCEEEEEEEE-S
T ss_pred E-EEEEEEEccCCCcccccCCCceEec---------------------------------------CCceEEEEEEEe-e
Confidence 4 45677877666543221 112233 455555555543 5
Q ss_pred CCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 221 DPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 221 ~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.|.+.+.|+|++..+....+..+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 126 ~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 189 (284)
T 2rik_A 126 SPEIKVLWYKDETEIQESSKFRMSFV-ESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKV 189 (284)
T ss_dssp SSCCEEEEEETTEECCCSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eCCCEEEEEECCEECcCCCcEEEEEc-CCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEE
Confidence 57778899999998876655444332 23568999999999999999999999999998888876
No 125
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.83 E-value=6.3e-19 Score=140.92 Aligned_cols=130 Identities=15% Similarity=0.249 Sum_probs=78.5
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKI 195 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~ 195 (286)
...|.|.++..+|+|.|+|.+.| .+.. ...+.|.|..++...... .
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~-~~~~-~~~~~l~V~~~~~~~~~~-~------------------------------- 124 (222)
T 3sbw_C 79 NAALQITDVKLQDAGVYRCMISY-GGAD-YKRITVKVNAPYNKINQR-I------------------------------- 124 (222)
T ss_dssp EEEEEESSCCGGGCEEEEEEEES-SSEE-EEEEEEEEEBCCCCCEEE-E-------------------------------
T ss_pred EEEEEEcCcccccCeEEEEEEEe-CCCc-eeEEEEEEECCCCCCCce-e-------------------------------
Confidence 35799999999999999999998 4433 345667765433211000 0
Q ss_pred cccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeC-CeeCCCCCCceeeec-CCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 196 ESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKD-GKPLSPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 196 ~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~-g~~~~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
...+.+|+.+.|.|.+. |.|.|.+.|+++ |..+........... ...-..+.+..+..+|.|.|+|.|.|.
T Consensus 125 ------~~~~~~g~~v~L~C~~~-g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~ 197 (222)
T 3sbw_C 125 ------LVVDPVTSEHELTCQAE-GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRL 197 (222)
T ss_dssp ------EEEETTTTEEEEEEEEE-EBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEET
T ss_pred ------eeeecCCCcEEEEEEec-CCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeC
Confidence 00123455666666553 356677777777 444432211111111 011112223356689999999999999
Q ss_pred ccceeeEEEEEEC
Q psy15667 274 AAQARYSSKLQVK 286 (286)
Q Consensus 274 ~g~~~~~~~L~V~ 286 (286)
.|....++.|.|.
T Consensus 198 ~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 198 DPEENHTAELVIP 210 (222)
T ss_dssp TTTEEEEEEEECC
T ss_pred ccceeeEEEEEec
Confidence 9999999998873
No 126
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.83 E-value=2.4e-19 Score=142.56 Aligned_cols=74 Identities=20% Similarity=0.432 Sum_probs=48.1
Q ss_pred CCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCc-eeee-cC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 207 EGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPV-NVSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~-~~~~-~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+|+.+.|.|.+....|+ ..+.|+|+|..+...... .... .+ .....|.|..+..+|+|.|+|.|.|.......+
T Consensus 129 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 129 STAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp TTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeee
Confidence 45566666666543444 388999999877543210 0011 11 113468899999999999999999997765444
No 127
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.83 E-value=5.6e-20 Score=151.38 Aligned_cols=222 Identities=16% Similarity=0.257 Sum_probs=119.6
Q ss_pred CeeEeccccccccCCCcEEEEEEee---cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIAS---GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~---g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+.|...+.++.+.+|++++|.|.+. +.|.+.+.|++++........... . .... .+.. +.|
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~----~-~~~~----~~~~------~~~- 69 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLF----Y-YSNL----SVPT------GRF- 69 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEE----E-ETTE----EEEC------GGG-
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEE----E-cCCC----cccC------ccc-
Confidence 5567778888999999999999988 778889999997654332211100 0 0000 0000 000
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcce-eeeeeEEEEcCCCce
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGLPYV 158 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~-~~~~~~l~v~~~~~~ 158 (286)
. ..+.+..+ .......|.|.++..+|+|.|+|.+.+..+.. ......|.|...
T Consensus 70 ----------------~--~r~~~~~~-----~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--- 123 (268)
T 3mj6_A 70 ----------------Q--NRSHLVGD-----TFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE--- 123 (268)
T ss_dssp ----------------T--TTEEECSC-----TTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC---
T ss_pred ----------------c--CceEEeec-----CCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc---
Confidence 0 01111110 11234679999999999999999999865443 223345554311
Q ss_pred ecCCceEEecCCCEEEEeeE---eeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC
Q psy15667 159 RLIPKVTAIDGEGLSIKCPV---AGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL 235 (286)
Q Consensus 159 ~~~~~~~~~~g~~~~l~c~~---~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~ 235 (286)
......+..|+.+.|.|.+ .+.|.+.+.|.+...... . ....+... .+.+.. +.......
T Consensus 124 -~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~---------~--~~~~~~~~--~~~~~~---~~~~~~~~ 186 (268)
T 3mj6_A 124 -EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHT---------E--EETVLSYD--SNMRSG---KFQSLGRF 186 (268)
T ss_dssp -CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCS---------S--CEEEEEEE--TTSSSC---EEECSSTT
T ss_pred -CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCC---------c--ceeEEEec--CCCCcc---cccccccc
Confidence 1123556678888888887 444666666665221100 0 00000000 000000 00000000
Q ss_pred CCCCCceeee-cCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 236 SPRFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 236 ~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
..+..+.. .......|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 187 --~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 187 --RNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp --TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred --ccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEE
Confidence 00111100 0122568999999999999999999999999999998887
No 128
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.83 E-value=3.8e-20 Score=147.12 Aligned_cols=127 Identities=19% Similarity=0.345 Sum_probs=76.1
Q ss_pred ceEEEccCCCCCCeeEEEEEEcCCc-ceeeeeeEEEEcC----CCceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEE
Q psy15667 117 TSLVINPVGREDRGIYQCIARRSDG-DVAQGSAELQLGG----LPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEK 190 (286)
Q Consensus 117 ~~l~i~~v~~~d~G~Y~C~a~~~~g-~~~~~~~~l~v~~----~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~ 190 (286)
..|.|.++..+|+|.|+|.+.|..+ ........|.|.. .|.+...+ ...
T Consensus 68 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~------------------------- 122 (211)
T 3tv3_L 68 ASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSE------------------------- 122 (211)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHH-------------------------
T ss_pred EEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchh-------------------------
Confidence 4688888888888888888887765 2223345566542 22221111 111
Q ss_pred cCCcccccccccCCCCCCCeEEEEEeeecCC-CCCeEEEEeCCeeCCCCCCce-eeecC----CCeeeEEEcccCCCCCe
Q psy15667 191 VPPKIESFAFPFDGLPEGARTRVICGVTHGD-PPLTIRWLKDGKPLSPRFPVN-VSDLD----SFSSLLSINSVSAAHSG 264 (286)
Q Consensus 191 ~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~-p~~~~~W~~~g~~~~~~~~~~-~~~~~----~~~~~L~i~~v~~~d~G 264 (286)
+.+|+.+.|.|.+.... |.+.+.|+|+|..+....... ..... .....|.|..+..+|+|
T Consensus 123 --------------~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g 188 (211)
T 3tv3_L 123 --------------ELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHR 188 (211)
T ss_dssp --------------HHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSS
T ss_pred --------------hhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCC
Confidence 11355555555554322 357788999998775421100 00000 11256899999999999
Q ss_pred EEEEEEEecccceeeEEE
Q psy15667 265 EYTCVASNTAAQARYSSK 282 (286)
Q Consensus 265 ~Y~C~a~N~~g~~~~~~~ 282 (286)
.|+|.|.|..+....++.
T Consensus 189 ~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 189 SYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp CEEEEEEETTEEEEEEEC
T ss_pred eEEEEEEECCCCEEeecc
Confidence 999999999988776654
No 129
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.83 E-value=4.4e-20 Score=145.61 Aligned_cols=129 Identities=17% Similarity=0.298 Sum_probs=82.1
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCccee----eeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVA----QGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKV 191 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~----~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~ 191 (286)
...|.|.++..+|+|.|+|.+.|..|... ...+.|.|...+. .|.+.-
T Consensus 64 ~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~-------------------------~p~~~~--- 115 (201)
T 1dr9_A 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFP-------------------------TPSISD--- 115 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCC-------------------------CCEEEE---
T ss_pred CcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCC-------------------------CCceEe---
Confidence 35789999999999999999998765432 2344555533211 011110
Q ss_pred CCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecC-CCeeeEEEcccCCCCCeEEEEEE
Q psy15667 192 PPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD-SFSSLLSINSVSAAHSGEYTCVA 270 (286)
Q Consensus 192 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a 270 (286)
.....|+.+.|.|.+..|.|.|.+.|+|+|..+............ ..-....+..+..+|.|.|+|.|
T Consensus 116 -----------~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a 184 (201)
T 1dr9_A 116 -----------FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLI 184 (201)
T ss_dssp -----------EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEE
T ss_pred -----------ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEE
Confidence 012347778888887667888899999999887644221111111 11112233556679999999999
Q ss_pred EecccceeeEEEE
Q psy15667 271 SNTAAQARYSSKL 283 (286)
Q Consensus 271 ~N~~g~~~~~~~L 283 (286)
.|..|..+..+.+
T Consensus 185 ~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 185 KYGHLRVNQTFNW 197 (201)
T ss_dssp EETTCCEEEEEEE
T ss_pred ecCcceeeeEEec
Confidence 9999988777654
No 130
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.83 E-value=2.8e-19 Score=142.17 Aligned_cols=197 Identities=19% Similarity=0.259 Sum_probs=111.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|.|...+..+.+.+|++++|.|.+.+.|.+.+.|+|++.. ....+.. . ... .......+.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~--~~~~~~~----~-~~~--------~~~~~~~~r~~--- 63 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPG--KAPKLLI----Y-YTN--------KLADGVPSRFS--- 63 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTT--SCCEEEE----E-TTT--------EECTTCCTTEE---
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCC--CCcEEEE----E-EcC--------cCCCCCCCcEE---
Confidence 6677778888999999999999999999999999985311 0011100 0 000 00000001111
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEc---CCCcee
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG---GLPYVR 159 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~---~~~~~~ 159 (286)
+. . ......|.|.++..+|+|.|+|.+.|..+........|.|. ..|.+.
T Consensus 64 ------------------~~--~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~ 116 (213)
T 3r06_A 64 ------------------GS--G-------SGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVS 116 (213)
T ss_dssp ------------------EE--E-------ETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEE
T ss_pred ------------------Ee--c-------cCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceee
Confidence 00 0 01235688888888888888888877654333334455552 122211
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPR 238 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~ 238 (286)
..+. ...+..|+.+.|.|.+....| .+.+.|+|+|..+...
T Consensus 117 ~~~~--------------------------------------~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 158 (213)
T 3r06_A 117 IFPP--------------------------------------SSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDG 158 (213)
T ss_dssp EECC--------------------------------------CHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred eeCC--------------------------------------CceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCc
Confidence 1100 011223555666666554333 4578899999877543
Q ss_pred C--CceeeecC----CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 239 F--PVNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 239 ~--~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
. ........ .....|.|.....+|+|.|+|.|.|..........
T Consensus 159 ~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~~~ 208 (213)
T 3r06_A 159 VLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIVKT 208 (213)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEE
T ss_pred eEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceEEe
Confidence 1 00001100 01346888899999999999999998755444433
No 131
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.82 E-value=1.1e-19 Score=145.02 Aligned_cols=75 Identities=19% Similarity=0.362 Sum_probs=47.1
Q ss_pred CCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCc-eeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 207 EGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPV-NVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~-~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
.|+.+.|.|.+....|++ .+.|+|+|..+...... ...... .....|.|.....+|+|.|+|.|.|..|....++
T Consensus 135 ~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 135 KENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred cCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 345666777665444555 88999999887542111 000000 0124588888889999999999999998776654
No 132
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.82 E-value=1.4e-18 Score=145.52 Aligned_cols=162 Identities=24% Similarity=0.374 Sum_probs=114.6
Q ss_pred ccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCC----------CcceEEEccCCCCCCeeEEEEEEcCC
Q psy15667 71 TVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRT----------SSTSLVINPVGREDRGIYQCIARRSD 140 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~----------~~~~l~i~~v~~~d~G~Y~C~a~~~~ 140 (286)
...+.-...|.+.. .+.+.+.|+|+|..+.... ....|.|.++..+|+|.|+|.+.|..
T Consensus 17 ~~G~~v~l~C~~~g-----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 85 (305)
T 2nzi_A 17 RYQSNATLVCKVTG-----------HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQG 85 (305)
T ss_dssp CTTCCEEEEEEEEC-----------SSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETT
T ss_pred eCCCcEEEEEEEeC-----------CCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCC
Confidence 34456678888754 2346899999998875421 12379999999999999999999998
Q ss_pred cceeeeeeEEEEcCCCceecC------CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEE
Q psy15667 141 GDVAQGSAELQLGGLPYVRLI------PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVI 214 (286)
Q Consensus 141 g~~~~~~~~l~v~~~~~~~~~------~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~ 214 (286)
|.. ...+.|.|...|.+... ....+..|+.+.|.|.+.+
T Consensus 86 g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g---------------------------------- 130 (305)
T 2nzi_A 86 GSV-SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG---------------------------------- 130 (305)
T ss_dssp EEE-EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEE----------------------------------
T ss_pred CCc-cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECC----------------------------------
Confidence 865 45677777544332211 2234445555555555544
Q ss_pred EeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcc-cCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 215 CGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINS-VSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 215 c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~-v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.|.+.+.|+|++..+....++.+... .....|.|.+ +..+|+|.|+|.|.|..|....++.|.|
T Consensus 131 ------~p~p~i~W~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 195 (305)
T 2nzi_A 131 ------KPDPVITWQKGQDLIDNNGHYQVIVT-RSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (305)
T ss_dssp ------ESCCEEEEEESSSBCCSSSSCEEEEC-SSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ------CCCCEEEEEECCEECCCCCcEEEEEc-CCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEE
Confidence 45567778888877765555544332 2356889999 9999999999999999999999988876
No 133
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.82 E-value=8.6e-20 Score=146.05 Aligned_cols=130 Identities=23% Similarity=0.408 Sum_probs=83.6
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC---CceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcC
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL---PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVP 192 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~ 192 (286)
...|.|.++..+|+|.|+|.+.+.... ...+.|.|... |.+...+
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~--~~~~~l~V~~~~~~p~i~~~~------------------------------ 118 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDFD--SAAVSLQVAAPYSKPSMTLEP------------------------------ 118 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCCC--CCCCCCCCCBCCCCCEEECCC------------------------------
T ss_pred eEEEEECCcccccCEEEEEEEEeCCCc--eEEEEEEEEcCCCCCcEEeCC------------------------------
Confidence 457999999999999999999875321 23344444322 1111111
Q ss_pred CcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEe-CCeeCCCCCCceeee-cCCCeeeEEEcccCCCCCeEEEEEE
Q psy15667 193 PKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLK-DGKPLSPRFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVA 270 (286)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~-~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a 270 (286)
...+.+|+.+.|.|.+..+.|.+.+.|++ ++..+.......... ....-..|.|.++..+|+|.|+|.|
T Consensus 119 ---------~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a 189 (222)
T 4i0k_A 119 ---------NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLV 189 (222)
T ss_dssp --------------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEE
T ss_pred ---------CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEE
Confidence 12245677777777775677778888888 455443322111111 1122235789999999999999999
Q ss_pred EecccceeeEEEEEEC
Q psy15667 271 SNTAAQARYSSKLQVK 286 (286)
Q Consensus 271 ~N~~g~~~~~~~L~V~ 286 (286)
.|..|....++.|.|.
T Consensus 190 ~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 190 RNPVLQQDAHGSVTIT 205 (222)
T ss_dssp EETTTTEEEEEEEECC
T ss_pred ECCCCCCceEEEEEEe
Confidence 9999999999999874
No 134
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.82 E-value=4.4e-19 Score=141.08 Aligned_cols=193 Identities=24% Similarity=0.300 Sum_probs=107.1
Q ss_pred eccccccccCCCcEEEEEEeecC-------CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASGN-------PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g~-------p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
..+.++.+.+|++++|.|.+.+. +.+.+.|+|++..... .+.+. ..... ........|.+.
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~--~~~~~---~~~~~-------~~~~~~~~~r~~ 72 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYY--AEVVA---TNNPD-------RRVKPETQGRFR 72 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGG--CCBSE---ESCTT-------SCBCTTTTTTEE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcc--cceEe---cCCcc-------cccCccccCceE
Confidence 34667789999999999998864 5789999998753210 00000 00000 000111122221
Q ss_pred EEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCccee---eeeeEEEEcCCC
Q psy15667 80 CVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVA---QGSAELQLGGLP 156 (286)
Q Consensus 80 C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~---~~~~~l~v~~~~ 156 (286)
+.. +. ......|.|.++..+|+|.|.|.+.+..+... ...+.|.|...+
T Consensus 73 -----------~~~------------~~-----~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~ 124 (214)
T 2zg1_A 73 -----------LLG------------DV-----QKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI 124 (214)
T ss_dssp -----------ECS------------CG-----GGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC
T ss_pred -----------Eec------------cC-----CCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC
Confidence 110 00 01224577777778888888887776542211 123445553321
Q ss_pred ceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecC---CCCCeEEEEeCCe
Q psy15667 157 YVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHG---DPPLTIRWLKDGK 233 (286)
Q Consensus 157 ~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~---~p~~~~~W~~~g~ 233 (286)
. .|.+. . ...+.+|+.+.|.|.+... .|+|.+.|+|++.
T Consensus 125 ~-------------------------~p~i~---------~----~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~ 166 (214)
T 2zg1_A 125 E-------------------------KPDIH---------F----LEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNAL 166 (214)
T ss_dssp C-------------------------CCEEC---------------CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTT
T ss_pred C-------------------------CCcee---------c----CccccCCCeEEEEEEeccCCCCCCCceEEEeCCCC
Confidence 1 01110 0 0125577778888876542 4789999999987
Q ss_pred eCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 234 PLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
.+.... ......|.|..+..+|+|.|+|.|.|..+....++.+.
T Consensus 167 ~~~~~~-------~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 167 SPLDPE-------TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp SSSCSS-------CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred ccCCCC-------ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 543211 12356899999999999999999999875544444433
No 135
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.82 E-value=3.2e-19 Score=140.14 Aligned_cols=180 Identities=18% Similarity=0.220 Sum_probs=107.1
Q ss_pred ccccccccCCCcEEEEEEeec-CCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASG-NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRA 86 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~ 86 (286)
.+..+.+.+|++++|.|.+.+ .+.+.|.|++++..+. .+. .+..... .+.+ .| ..|.
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~---~~~-----~~~~~~~-~~~~-----~~-~~~~------- 61 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLA---FIV-----PHETKSP-EIHV-----TN-PKQG------- 61 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEE---EEE-----CCSSSCC-EEEE-----CC-HHHH-------
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEE---EEe-----cccCCCC-ceee-----cC-cccc-------
Confidence 455678899999999999875 5667999999875441 000 0000000 0000 00 0000
Q ss_pred EEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEE
Q psy15667 87 GTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTA 166 (286)
Q Consensus 87 g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~ 166 (286)
++. . +. ....|.|.++..+|+|.|+|.+.+..+.. ...+.|.|...+..
T Consensus 62 ~R~------------~-------~~---~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~~~~-------- 110 (193)
T 2if7_A 62 KRL------------N-------FT---QSYSLQLSNLKMEDTGSYRAQISTKTSAK-LSSYTLRILRQLRN-------- 110 (193)
T ss_dssp TTE------------E-------EC---TTCCEEECSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCEE--------
T ss_pred ccE------------E-------EC---CCeEEEECCCCcccCceEEEEEEecCCCe-EEEEEEEEEccCCC--------
Confidence 000 0 00 13568899999999999999998877653 23556666433210
Q ss_pred ecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCC-eEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeee
Q psy15667 167 IDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGA-RTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSD 245 (286)
Q Consensus 167 ~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~-~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~ 245 (286)
|.+.- ....+..|. .+.|.|.+..+.|.+.+.|+|+|..+..
T Consensus 111 -----------------p~i~~------------~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~-------- 153 (193)
T 2if7_A 111 -----------------IQVTN------------HSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSS-------- 153 (193)
T ss_dssp -----------------EEEEE------------CCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEES--------
T ss_pred -----------------CeEec------------CceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCC--------
Confidence 00000 001122354 7888888875567899999999986522
Q ss_pred cCCCeeeEEEcccCCC-CCeEEEEEEEecccceeeEE
Q psy15667 246 LDSFSSLLSINSVSAA-HSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 246 ~~~~~~~L~i~~v~~~-d~G~Y~C~a~N~~g~~~~~~ 281 (286)
...|.|.....+ |+|.|+|.|.|.+|..+..+
T Consensus 154 ----~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~ 186 (193)
T 2if7_A 154 ----QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSV 186 (193)
T ss_dssp ----SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEE
T ss_pred ----CCeEEEEeccCcCCCCcEEEEEECCCCcccccc
Confidence 234666544454 89999999999999875543
No 136
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.82 E-value=2.3e-19 Score=146.23 Aligned_cols=198 Identities=17% Similarity=0.235 Sum_probs=111.2
Q ss_pred CCeeE-eccccccccCCCcEEEEEEeecCCCCe-----eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCC
Q psy15667 2 PPILT-YSFIEQTLQPGPAVSLKCIASGNPTPD-----IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 2 ~p~~~-~~~~~~~~~~G~~~~l~C~~~g~p~p~-----v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
+|.+. ..+..+.+.+|++++|.|.+.|.|.+. +.|++++..... ...+ +.. . ..
T Consensus 2 ~~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~--~~~~-------------~~~---~--~~ 61 (248)
T 3pv7_A 2 DLKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDK--EVKV-------------FEF---F--GD 61 (248)
T ss_dssp CEEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCC--EEEE-------------EEE---E--SS
T ss_pred ceEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCc--ceEE-------------EEe---c--CC
Confidence 34555 345566899999999999999998876 999987533211 1100 000 0 00
Q ss_pred eEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCc---CCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE
Q psy15667 76 GEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIP---GRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 152 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~---~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v 152 (286)
. ..-++++..+. .......|.|.++..+|+|.|+|.+.+..+.. .....|.|
T Consensus 62 ~------------------------~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~L~V 116 (248)
T 3pv7_A 62 H------------------------QEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKA-QGTVQLEV 116 (248)
T ss_dssp C------------------------EEESSTTCBCCHHHHTTTBCCEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEE
T ss_pred c------------------------ccccCCceEEEeccCCCCcEEEEeCCCCHHHCeEEEEEEEeCCccc-eeEEEEEE
Confidence 0 00111111111 11234679999999999999999999987654 34677777
Q ss_pred cCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeC
Q psy15667 153 GGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKD 231 (286)
Q Consensus 153 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~ 231 (286)
...|.+...+...+..|..+.|.|.+.+ +.|.+ .+.|+|+
T Consensus 117 ~~~P~v~~~~~~~~~~~~~~~L~C~~~g---------------------------------------~~P~pi~v~W~k~ 157 (248)
T 3pv7_A 117 VASPASRLLLDQVGMKENEDKYMCESSG---------------------------------------FYPEAINITWEKQ 157 (248)
T ss_dssp EBCCEEEEECC--------CEEEEEEEE---------------------------------------EBSSCCEEEEEEE
T ss_pred ecCCceEEecCCccccCCCcEEEEEEcc---------------------------------------EECCCeEEEEEEC
Confidence 7666554433333334444555555554 23444 5666666
Q ss_pred CeeCCCCCC-------ceeeecC----CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 232 GKPLSPRFP-------VNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 232 g~~~~~~~~-------~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
|..+..... ....... .....|.|.....+|.|.|+|.|.|..+....++.+
T Consensus 158 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v 220 (248)
T 3pv7_A 158 TQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNF 220 (248)
T ss_dssp CSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEE
T ss_pred CccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEE
Confidence 643321100 0000000 113568899999999999999999999864444333
No 137
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.82 E-value=1.9e-19 Score=143.21 Aligned_cols=189 Identities=20% Similarity=0.299 Sum_probs=109.2
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..- ...+.. ..... ......+.|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~--~~~~~~----~~~~~---------~~~~~~~r~~--- 63 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQ--RPRLLI----YETST---------LASGVPSRFK--- 63 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTS--CCEEEE----ETTTE---------ECTTCCTTEE---
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCC--CcEEEE----EeCCc---------cCCCCCccEE---
Confidence 56777788899999999999999999999999999853110 011100 00000 0000001111
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcCCCceec
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~~~~~~~ 160 (286)
+. . ......|.|.++..+|+|.|+|.+.|..+. .......|.|...+ .
T Consensus 64 ------------------~~--~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~---~ 113 (213)
T 3nl4_L 64 ------------------GS--G-------SGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDP---V 113 (213)
T ss_dssp ------------------EE--E-------ETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCC---B
T ss_pred ------------------Ee--c-------CCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCC---c
Confidence 00 0 012346888888888888888888876553 22223444442210 0
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
.|.+.-. + +...+.+|+.+.|.|.+..+.|.+.+.|+|+|..+.....
T Consensus 114 ----------------------~p~v~~~--~--------~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~ 161 (213)
T 3nl4_L 114 ----------------------APTVLIF--P--------PSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIE 161 (213)
T ss_dssp ----------------------CCEEEEE--C--------CCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEE
T ss_pred ----------------------CCeEEEe--C--------CchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCee
Confidence 0111000 0 0112345777888887765577888999999988754210
Q ss_pred cee--ee-c-C--CCeeeEEEcccCCCCCeEEEEEEE
Q psy15667 241 VNV--SD-L-D--SFSSLLSINSVSAAHSGEYTCVAS 271 (286)
Q Consensus 241 ~~~--~~-~-~--~~~~~L~i~~v~~~d~G~Y~C~a~ 271 (286)
... .. . . .....|.|..+..+|+|.|+|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 162 NSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred cccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 000 00 0 0 113568999999999999999999
No 138
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.82 E-value=5.2e-19 Score=144.30 Aligned_cols=38 Identities=21% Similarity=0.286 Sum_probs=32.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG 40 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~ 40 (286)
+.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|+.
T Consensus 5 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~ 42 (250)
T 3esu_F 5 IVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQK 42 (250)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEEC
Confidence 45666677788999999999999999999999999853
No 139
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.82 E-value=1.1e-18 Score=151.11 Aligned_cols=160 Identities=25% Similarity=0.361 Sum_probs=113.0
Q ss_pred CCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeC--CccCcCC-------------CCcceEEEccCCCCCCeeEEEEEE
Q psy15667 73 EDGGEYACVAENRAGTCEITPYDSGPYLIAWFKD--GRQIPGR-------------TSSTSLVINPVGREDRGIYQCIAR 137 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~--g~~l~~~-------------~~~~~l~i~~v~~~d~G~Y~C~a~ 137 (286)
.+.-...|.+.. .+.+.+.|+|+ |..+... .....|.|.++.++|+|.|+|.|.
T Consensus 15 G~~v~l~C~~~g-----------~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (389)
T 2jll_A 15 NGQVTLVCDAEG-----------EPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 83 (389)
T ss_dssp TSEEEEEEEEEC-----------SSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEE
T ss_pred CCeEEEEEEeec-----------ccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEE
Confidence 445577887764 23467999999 7766431 123579999999999999999999
Q ss_pred cCCcceeeeeeEEEEcCCCceecCCce-EEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEe
Q psy15667 138 RSDGDVAQGSAELQLGGLPYVRLIPKV-TAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICG 216 (286)
Q Consensus 138 ~~~g~~~~~~~~l~v~~~~~~~~~~~~-~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~ 216 (286)
|..|.. ...+.|.|..+|.+...+.. .+..|+.+.|.|.+.
T Consensus 84 n~~g~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~------------------------------------- 125 (389)
T 2jll_A 84 SRIGGH-QKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVK------------------------------------- 125 (389)
T ss_dssp CSSCEE-EEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEE-------------------------------------
T ss_pred eCCCCc-ceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEE-------------------------------------
Confidence 998875 45778888665544333222 334455555555444
Q ss_pred eecCCCCCeEEEEeCCeeCCCCC--CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 217 VTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 217 ~~~~~p~~~~~W~~~g~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|.|.+.+.|+|+|..+.... ++.+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 126 ---g~p~~~i~W~~~g~~l~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 192 (389)
T 2jll_A 126 ---SNPPASIHWRRDKLVLPAKNTTNLKTYS-TGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILAL 192 (389)
T ss_dssp ---EESCCEEEEEETTEESSCTTCTTEEEEE-CSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEE
T ss_pred ---ecCCCeEEEEECCccCCcccCceEEEec-cCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 44567788888888876543 333322 233568999999999999999999999999888887765
No 140
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.81 E-value=1.2e-18 Score=139.34 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=51.9
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
+.+|+.+.|.|.+..+.|.| .+.|+|+|..+............ .....|.|.. ...|.|.|+|.|.|..|......
T Consensus 136 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~~~~~~~ 214 (219)
T 1c1e_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS-SPRPSETVTCNVAHPASSTKVDK 214 (219)
T ss_dssp SCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGGTEEEEE
T ss_pred cccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCCCccEEE
Confidence 55778888888776546666 88999888764211000000001 0134688844 44467999999999999887777
Q ss_pred EEEEC
Q psy15667 282 KLQVK 286 (286)
Q Consensus 282 ~L~V~ 286 (286)
.|.++
T Consensus 215 ~i~~~ 219 (219)
T 1c1e_H 215 KIVPR 219 (219)
T ss_dssp ECCCC
T ss_pred ecCCC
Confidence 66553
No 141
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=9.4e-19 Score=143.56 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=27.8
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD 39 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~ 39 (286)
.+..+++.+|++++|.|.+.|.| .+.+.|+|+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 39 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRH 39 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEE
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEe
Confidence 45667899999999999999885 689999986
No 142
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.81 E-value=6.2e-19 Score=141.73 Aligned_cols=204 Identities=18% Similarity=0.270 Sum_probs=120.5
Q ss_pred ccccccccCCCcEEEEEEeecCCC-CeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPT-PDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRA 86 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~-p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~ 86 (286)
.+.+..+.+|+++.|.|.+.+.|. +.+.|++++..... ..+.. . .+ ....|.-......
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~-~~~~~-~------------~~------~~~~~~~r~~~~~ 65 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGAR-PRLAS-A------------EM------QGSELQVTMHDTR 65 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCC-CEEEE-E------------EE------ETTEEEEEECCCS
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCcee-EEEEe-c------------cc------cCCcccccccccc
Confidence 466778999999999999999985 89999987643211 01100 0 00 0112221111100
Q ss_pred EEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEE
Q psy15667 87 GTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTA 166 (286)
Q Consensus 87 g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~ 166 (286)
.. .+.+.. ...+.|.|.++..+|+|.|+|.+.+..+......+.|.|...|...
T Consensus 66 --------~~-~~~~~~----------~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~------- 119 (231)
T 2pet_A 66 --------GR-SPPYQL----------DSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEAT------- 119 (231)
T ss_dssp --------CC-SSCCEE----------CTTCCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCC-------
T ss_pred --------cc-cccccc----------CCCceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCc-------
Confidence 00 000000 0113389999999999999999988762233445666665443210
Q ss_pred ecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeE-EEEEeeecCCCCCeEEEEeCCeeCCCCC----Cc
Q psy15667 167 IDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGART-RVICGVTHGDPPLTIRWLKDGKPLSPRF----PV 241 (286)
Q Consensus 167 ~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~-~l~c~~~~~~p~~~~~W~~~g~~~~~~~----~~ 241 (286)
.+. . ......+.+|+.+ .|.|.+..+.|.+.+.|+|+|..+.... +.
T Consensus 120 ------------------~~~--~--------~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~ 171 (231)
T 2pet_A 120 ------------------EVS--P--------NKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEG 171 (231)
T ss_dssp ------------------EEE--E--------CCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSE
T ss_pred ------------------EEe--c--------CCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccce
Confidence 000 0 0012235578777 8899886678889999999999886544 33
Q ss_pred eeeec---CC-----CeeeEEEcccCCCCCeEEEEEEEe-----cccc-eeeEEEEEE
Q psy15667 242 NVSDL---DS-----FSSLLSINSVSAAHSGEYTCVASN-----TAAQ-ARYSSKLQV 285 (286)
Q Consensus 242 ~~~~~---~~-----~~~~L~i~~v~~~d~G~Y~C~a~N-----~~g~-~~~~~~L~V 285 (286)
.+... .. ....|.|.....+|+|.|+|.|.| ..|. .+..+.|.|
T Consensus 172 ~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 172 YMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred eecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 32211 00 025688876666679999999999 5665 556666654
No 143
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.81 E-value=1.7e-18 Score=143.50 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=33.4
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG 40 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~ 40 (286)
+.|...+.++++.+|++++|.|.+.+.|.+.+.|+|++
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~ 50 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQK 50 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEEC
Confidence 45667788889999999999999999999999999864
No 144
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=5.8e-18 Score=137.79 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=27.7
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD 39 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~ 39 (286)
.+..+.+.+|++++|.|.+.|.| .+.+.|+|+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 41 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQ 41 (247)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ecCCEEEecCCcEEEEEEeccccCCCceEEEEEe
Confidence 44568899999999999999987 688999984
No 145
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.81 E-value=5.4e-19 Score=142.73 Aligned_cols=198 Identities=17% Similarity=0.257 Sum_probs=112.7
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
+.+...+.++.+.+|++++|.|.+.+.|.+.+.|+|++.. ....+.. ...+. ......+.|.
T Consensus 25 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~--~~~~~~~----~~~~~---------~~~~~~~r~~--- 86 (237)
T 3sob_L 25 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPG--KAPKLLI----YSASF---------LYSGVPSRFS--- 86 (237)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTT--SCCEEEE----ETTTE---------ECTTCCTTEE---
T ss_pred ceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCC--CCCEEEE----Eeccc---------cCCCCCCcEE---
Confidence 3455567778999999999999999999999999985311 0011100 00000 0000001111
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCcee
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPYVR 159 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~~~ 159 (286)
+. . ......|.|.++..+|+|.|+|.+.+..+........|.|.. .|.+.
T Consensus 87 ------------------~~--~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~ 139 (237)
T 3sob_L 87 ------------------GS--G-------SGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVF 139 (237)
T ss_dssp ------------------EE--E-------ETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEE
T ss_pred ------------------EE--c-------CCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceE
Confidence 00 0 012356888888888888888888776543222334455432 11111
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPR 238 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~ 238 (286)
..+ +...+.+|+.+.|.|.+..+.| .+.+.|+|+|..+...
T Consensus 140 ~~~--------------------------------------~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~ 181 (237)
T 3sob_L 140 IFP--------------------------------------PSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN 181 (237)
T ss_dssp EEC--------------------------------------CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSS
T ss_pred EeC--------------------------------------CChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCc
Confidence 000 0011223566777776665455 6789999999887642
Q ss_pred C--CceeeecC----CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 239 F--PVNVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 239 ~--~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
. ........ .....|.|..+..+|+|.|+|.|.|.......+..+
T Consensus 182 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 232 (237)
T 3sob_L 182 SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 232 (237)
T ss_dssp EEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred eeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeee
Confidence 1 00000000 113568899999999999999999998765555444
No 146
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.81 E-value=1.2e-18 Score=141.69 Aligned_cols=38 Identities=29% Similarity=0.311 Sum_probs=33.5
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG 40 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~ 40 (286)
+.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|+.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~ 39 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQK 39 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeC
Confidence 45677788889999999999999999999999999853
No 147
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.81 E-value=7.7e-18 Score=137.94 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=32.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD 39 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~ 39 (286)
||.|...+..+++.+|++++|.|.+.+. |.+.+.|+|.
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 45 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQ 45 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEE
Confidence 6778888888999999999999999883 6789999974
No 148
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=4.8e-19 Score=145.29 Aligned_cols=67 Identities=16% Similarity=0.327 Sum_probs=46.1
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecc
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA 274 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~ 274 (286)
.+.+|+.+.|.|.+.. +++.+.|+|+|..+.................|.|.+++ |+|.|+|.|.|..
T Consensus 117 ~V~~G~~vtL~C~~~~--~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRS--SYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp TCBTTCEEEEEEECSS--CCSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred ccCCCCEEEEEEeCCC--CCcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCC
Confidence 3667888888887643 34689999999876432211111111235689999998 9999999999863
No 149
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=1.4e-18 Score=140.73 Aligned_cols=196 Identities=17% Similarity=0.273 Sum_probs=105.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCC----CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccc---cCCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNP----TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVT---VEDG 75 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p----~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~---~~D~ 75 (286)
+.|...+.+.++.+|++++|.|.+.+.| .+.+.|+|++..- ...+. +.... ....
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~--~~~~~----------------~~~~~~~~~~~~ 63 (240)
T 1moe_A 2 IVLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQ--PPKLL----------------IYRASNLESGIP 63 (240)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTS--CCEEE----------------EETTTEECTTCC
T ss_pred CceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCC--CceEE----------------EEEecccCcCCC
Confidence 3566777888999999999999999998 7899999863110 00110 00000 0000
Q ss_pred eEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC
Q psy15667 76 GEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL 155 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~ 155 (286)
+.|. + .+ ......|.|.++.++|+|.|+|.+.|..+......+.|.|...
T Consensus 64 ~r~~---------------------~--~~-------~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 64 VRFS---------------------G--TG-------SRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp TTEE---------------------E--EE-------ETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred ccEE---------------------E--Ee-------cCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 0110 0 00 0112357777777777777777777764432223445665432
Q ss_pred C-------ceecCCceEEecCCCEEEEeeEeeecC--CeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeE
Q psy15667 156 P-------YVRLIPKVTAIDGEGLSIKCPVAGYPI--EEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTI 226 (286)
Q Consensus 156 ~-------~~~~~~~~~~~~g~~~~l~c~~~~~p~--~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~ 226 (286)
+ .+.......+.+|+.++|.|.+.+.|. +.+.|.+..+.. .+..+
T Consensus 114 ~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~--------------------------~~~~~ 167 (240)
T 1moe_A 114 GSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQ--------------------------GLEWI 167 (240)
T ss_dssp SCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTS--------------------------CCEEE
T ss_pred CCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCC--------------------------CcEEE
Confidence 1 112223455667777888887777653 466676532100 00000
Q ss_pred EEEe--CCeeC---CCCCCceeeec-CCCeeeEEEcccCCCCCeEEEEEEEe
Q psy15667 227 RWLK--DGKPL---SPRFPVNVSDL-DSFSSLLSINSVSAAHSGEYTCVASN 272 (286)
Q Consensus 227 ~W~~--~g~~~---~~~~~~~~~~~-~~~~~~L~i~~v~~~d~G~Y~C~a~N 272 (286)
.... ++... ....++.+... ......|.|.+++.+|+|.|+|.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 168 GRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 0000 00000 00112332221 12346799999999999999999985
No 150
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=6.8e-20 Score=145.76 Aligned_cols=73 Identities=16% Similarity=0.272 Sum_probs=47.2
Q ss_pred CCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCce-eeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 207 EGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN-VSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~-~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
+|+.+.|.|.+....|+ +.+.|+|+|..+....... ..... .....|.|.++..+|+|.|+|.|.|..+....
T Consensus 127 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 204 (212)
T 1nfd_E 127 RTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVEK 204 (212)
T ss_dssp HTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCCC
T ss_pred cCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEEE
Confidence 45556666655543344 7888999988775432110 00000 01346889999999999999999999876544
No 151
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.80 E-value=2.7e-18 Score=140.72 Aligned_cols=37 Identities=24% Similarity=0.378 Sum_probs=32.7
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
+.|...+..+++.+|++++|.|.+.+.|.+.+.|+|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 40 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQ 40 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEE
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEE
Confidence 4566777788999999999999999999999999984
No 152
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.80 E-value=6.4e-19 Score=140.53 Aligned_cols=82 Identities=27% Similarity=0.409 Sum_probs=61.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC--CeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN--NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.| ..+.++.+.+|++++|.|.+.|.|.|.+.|+|||..|..+ .++.+.. .+ ....|.|.++..+|+|.|+
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~----~~-~~~~L~i~~~~~~d~G~Y~ 92 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYN----TP-SASYLEVTPDSENDFGNYN 92 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEE----ET-TEEEEEECCCSGGGCEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEec----CC-CeeEEEEecCChhhCeEEE
Confidence 5777 4777788999999999999999999999999999998754 3333211 11 1235777888888888888
Q ss_pred EEEEcCCEEE
Q psy15667 80 CVAENRAGTC 89 (286)
Q Consensus 80 C~a~n~~g~~ 89 (286)
|.|.|..|..
T Consensus 93 C~a~n~~g~~ 102 (215)
T 3mtr_A 93 CTAVNRIGQE 102 (215)
T ss_dssp EEEECSSCEE
T ss_pred EEEEECCCce
Confidence 8777766654
No 153
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.80 E-value=1.1e-18 Score=139.09 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=50.6
Q ss_pred CCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCc--eeeecC----CCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 207 EGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPV--NVSDLD----SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~--~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
+|+.+.|.|.+....|++ .+.|+|+|..+...... ...... .....|.|..+..+|+|.|+|.|.|.......
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 207 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCce
Confidence 356667777665444543 89999999887544100 000000 01237899999999999999999999866555
Q ss_pred EEEEE
Q psy15667 280 SSKLQ 284 (286)
Q Consensus 280 ~~~L~ 284 (286)
...+.
T Consensus 208 ~~~i~ 212 (216)
T 2xzc_L 208 TKSFN 212 (216)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 54443
No 154
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.80 E-value=1.1e-18 Score=142.72 Aligned_cols=198 Identities=19% Similarity=0.272 Sum_probs=107.6
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCC-----CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNP-----TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+.|...+..+.+.+|++++|.|.+.+.| .+.+.|+|++.. ....+. +... +.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~--~~~~~~----------------~~~~-----~~ 91 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPG--QSPKLL----------------IYQV-----ST 91 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTT--SCCEEE----------------EETT-----TE
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCC--CCcEEE----------------EEcC-----Cc
Confidence 4455667778899999999999999988 689999986421 001110 0000 00
Q ss_pred EEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC--
Q psy15667 78 YACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL-- 155 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~-- 155 (286)
+ . ..... .+.... ......|.|.++..+|+|.|+|.+.|..+........|.|...
T Consensus 92 ~-----~--------~~~~~--r~~~~~-------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~ 149 (252)
T 3bkj_L 92 R-----F--------SGVPD--RFSGSG-------SGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADA 149 (252)
T ss_dssp E-----C--------TTCCT--TEEEEE-------ETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCB
T ss_pred c-----c--------CCcCC--ceEEEc-------cCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCc
Confidence 0 0 00000 000000 0122467788888888888888887754422122234555321
Q ss_pred -CceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCe
Q psy15667 156 -PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGK 233 (286)
Q Consensus 156 -~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~ 233 (286)
|.+...+. ...+.+|+.+.|.|.+....|+ ..+.|+|+|.
T Consensus 150 ~P~v~~~~~--------------------------------------~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 191 (252)
T 3bkj_L 150 APTVSIFPP--------------------------------------SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 191 (252)
T ss_dssp CCEEEEECC--------------------------------------CHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred CcEEEEeCC--------------------------------------ChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCe
Confidence 11111000 0001235566666665543444 3788999988
Q ss_pred eCCCCCC--ceeee-cC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 234 PLSPRFP--VNVSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 234 ~~~~~~~--~~~~~-~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+..... ..... .+ .....|.|..+..+|+|.|+|.|.|..........+
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~p~~~~~ 247 (252)
T 3bkj_L 192 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 247 (252)
T ss_dssp EECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred ecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCCCeeEee
Confidence 7654300 00000 00 012468999999999999999999987665444433
No 155
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.79 E-value=1e-17 Score=136.42 Aligned_cols=37 Identities=19% Similarity=0.335 Sum_probs=32.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCC-----CCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNP-----TPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~v~W~~~ 39 (286)
+.|...+.++.+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~ 43 (247)
T 1svz_A 2 ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQ 43 (247)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CcEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEE
Confidence 3566678888999999999999999988 689999985
No 156
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.79 E-value=2.4e-18 Score=144.45 Aligned_cols=147 Identities=17% Similarity=0.235 Sum_probs=108.9
Q ss_pred CCeeEeccc-cccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFI-EQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~-~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+|.+..... ...+.+|+++.|.|.+. +.|.+.+.|++++..+....++.+.. ........|.|.+++.+|+|.|+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~ 182 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHI---DRNTGIIEMFMEKLQDEDEGTYT 182 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEE---ETTTTEEEEEESCCCGGGCEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEE---ccCCCEEEEEEccCCcccCEeEE
Confidence 455555444 77899999999999999 89999999999999998777665422 11122356999999999999999
Q ss_pred EEEEcCCEEEEE-------------------------------------------------ecCCCCCe-eEEEeeCCcc
Q psy15667 80 CVAENRAGTCEI-------------------------------------------------TPYDSGPY-LIAWFKDGRQ 109 (286)
Q Consensus 80 C~a~n~~g~~~~-------------------------------------------------~~~~~~~~-~~~W~~~g~~ 109 (286)
|.|.|..+.... .....+++ .+.|+|||..
T Consensus 183 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~ 262 (312)
T 2y23_A 183 FQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDERE 262 (312)
T ss_dssp EEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEE
T ss_pred EEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEE
Confidence 998775332211 01122344 8999999998
Q ss_pred CcCC------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE
Q psy15667 110 IPGR------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 152 (286)
Q Consensus 110 l~~~------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v 152 (286)
+... .....|.|.++..+|+|.|+|.|.|..|... ..+.|.+
T Consensus 263 ~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~-~~~~l~i 310 (312)
T 2y23_A 263 ISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDK-SRLKLVD 310 (312)
T ss_dssp EEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEE-EEEEECS
T ss_pred CCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCcee-eeeEEEe
Confidence 7521 1236899999999999999999999999763 4555544
No 157
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.79 E-value=1.5e-17 Score=138.20 Aligned_cols=155 Identities=22% Similarity=0.442 Sum_probs=104.5
Q ss_pred ccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEee-CCccCcCCC----------CcceEEEccCCCCCCeeEEEEEEcC
Q psy15667 71 TVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFK-DGRQIPGRT----------SSTSLVINPVGREDRGIYQCIARRS 139 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~-~g~~l~~~~----------~~~~l~i~~v~~~d~G~Y~C~a~~~ 139 (286)
...+.-...|.+.... +.+.+.|++ ||..+.... ....|.|.++..+|+|.|+|.+.|.
T Consensus 15 ~~G~~v~l~C~~~~~~----------~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~ 84 (291)
T 1qz1_A 15 SVGESKFFLCQVAGDA----------KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAE 84 (291)
T ss_dssp ETTCCEEEEEEESSCC----------SCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred eCCCeEEEEEEeCCCC----------CCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcC
Confidence 4455667788765421 147899999 888775321 2357999999999999999999999
Q ss_pred CcceeeeeeEEEEcCCCceecCC-ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeee
Q psy15667 140 DGDVAQGSAELQLGGLPYVRLIP-KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVT 218 (286)
Q Consensus 140 ~g~~~~~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~ 218 (286)
.|......+.|.|...|.+...+ ...+.+ |+.+.|.|.+.
T Consensus 85 ~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~---------------------------------------g~~v~l~C~~~ 125 (291)
T 1qz1_A 85 DGTQSEATVNVKIFQKLMFKNAPTPQEFKE---------------------------------------GEDAVIVCDVV 125 (291)
T ss_dssp TSCEEEEEEEEEEECCSEEEECCSSEEEET---------------------------------------TSCEEECCEEE
T ss_pred CCCeeEEEEEEEeeccccccCCCCcccccC---------------------------------------CCeEEEEEEec
Confidence 87654556677776555433322 233444 44455555443
Q ss_pred cCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 219 HGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 219 ~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
+.|.+.+.|+|++..+.......+.... .+.|.|.++..+|+|.|+|.|.|..+..
T Consensus 126 -~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 181 (291)
T 1qz1_A 126 -SSLPPTIIWKHKGRDVILKKDVRFIVLS--NNYLQIRGIKKTDEGTYRCEGRILARGE 181 (291)
T ss_dssp -CSSCCEEEEEETTSCSSTTCCTTEEECT--TSCEEETTCCGGGCEEEEEEEEEGGGTE
T ss_pred -cCCCCEEEEEECCEEcccCCCceEEEcc--CCcEEEccCccccCeEEEEEEEecCCCc
Confidence 4566778888888877543322222211 3579999999999999999999987543
No 158
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.8e-18 Score=143.90 Aligned_cols=144 Identities=26% Similarity=0.440 Sum_probs=104.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+|.|...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. +.++.+. ..+ .|.|.+++.+|+|.|+
T Consensus 98 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~----~L~i~~v~~~d~G~Y~ 169 (291)
T 2wim_A 98 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----ANN----NLQILNINKSDEGIYR 169 (291)
T ss_dssp CCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEEC----TTS----CEEETTCCGGGCEEEE
T ss_pred CcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEc----cCC----CEEEEecchhhCEEEE
Confidence 45666666777899999999999999999999999999988753 3444321 112 3889999999999999
Q ss_pred EEEEcCCE-EE-----EEe----c-------------------------CCCCCeeEEEeeCCccCcCC------CCcce
Q psy15667 80 CVAENRAG-TC-----EIT----P-------------------------YDSGPYLIAWFKDGRQIPGR------TSSTS 118 (286)
Q Consensus 80 C~a~n~~g-~~-----~~~----~-------------------------~~~~~~~~~W~~~g~~l~~~------~~~~~ 118 (286)
|.|.|..+ .. .+. + .+.+++.+.|++||..+... .....
T Consensus 170 C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~ 249 (291)
T 2wim_A 170 CEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTE 249 (291)
T ss_dssp EEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCE
T ss_pred EEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccE
Confidence 99988652 11 110 0 01234679999999987642 23467
Q ss_pred EEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC
Q psy15667 119 LVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 154 (286)
Q Consensus 119 l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~ 154 (286)
|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..
T Consensus 250 L~i~~~~~~d~G~Y~C~a~N~~G~~-~~~~~l~v~~ 284 (291)
T 2wim_A 250 LTVRNIINSDGGPYVCRATNKAGED-EKQAFLQVFV 284 (291)
T ss_dssp EEEESCCSTTCEEEEEEEEETTEEE-EEEEEEEC--
T ss_pred EEEeeCCcccCEEEEEEEEECCCce-eeeEEEEEEE
Confidence 9999999999999999999999976 4467776643
No 159
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.78 E-value=2.4e-18 Score=144.37 Aligned_cols=143 Identities=25% Similarity=0.460 Sum_probs=103.9
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC---eeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN---RFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~---~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
|.|...+....+.+|++++|.|.+.|.|.|.+.|++++..+.... ++.. . ..+ .|.|.+++.+|+|.|+
T Consensus 109 p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~----~-~~~---~L~i~~~~~~d~G~Y~ 180 (304)
T 2yd9_A 109 PNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ----L-RSG---ALQIESSEETDQGKYE 180 (304)
T ss_dssp CEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE----C-TTS---CEEECSCCGGGCEEEE
T ss_pred CeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe----C-CCe---EEEEccCCcccCEEEE
Confidence 778888888899999999999999999999999999999886432 2211 1 111 4889999999999999
Q ss_pred EEEEcCCEEEE-------Ee-----c-----------------------CCCCCeeEEEeeCCccCcCCC--Ccc--eEE
Q psy15667 80 CVAENRAGTCE-------IT-----P-----------------------YDSGPYLIAWFKDGRQIPGRT--SST--SLV 120 (286)
Q Consensus 80 C~a~n~~g~~~-------~~-----~-----------------------~~~~~~~~~W~~~g~~l~~~~--~~~--~l~ 120 (286)
|.|.|..|... +. | .+.+++.+.|++||..+.... ... .|.
T Consensus 181 C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~ 260 (304)
T 2yd9_A 181 CVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLE 260 (304)
T ss_dssp EEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEE
T ss_pred EEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEE
Confidence 99999887532 10 0 011345799999999886432 223 366
Q ss_pred EccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC
Q psy15667 121 INPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLP 156 (286)
Q Consensus 121 i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~ 156 (286)
|.++ +|+|.|+|.|.|..|.. ...+.|.|...+
T Consensus 261 i~~~--~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~~ 293 (304)
T 2yd9_A 261 LTDV--KDSANYTCVAMSSLGVI-EAVAQITVKSLP 293 (304)
T ss_dssp ECSC--CSCEEEEEEEEETTEEE-EEEEEEC-----
T ss_pred Eccc--ccCEEEEEEEEeCCCcE-EEEEEEEEecCc
Confidence 6554 79999999999999976 456777775443
No 160
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.78 E-value=1.2e-18 Score=139.36 Aligned_cols=131 Identities=19% Similarity=0.175 Sum_probs=85.9
Q ss_pred CcceEEEccCCCCCCeeEEEEEEcCC-cceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCC
Q psy15667 115 SSTSLVINPVGREDRGIYQCIARRSD-GDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPP 193 (286)
Q Consensus 115 ~~~~l~i~~v~~~d~G~Y~C~a~~~~-g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~ 193 (286)
....|.|.++..+|+|.|+|.+.+.. +.. ...+.|.|...|.+...+
T Consensus 76 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~L~V~~~P~~~~~~------------------------------- 123 (221)
T 3eow_R 76 RDASLRMFGLRVEDEGSYTCLFVTFPQGSR-SVDIWLRVLAKPQNTAEV------------------------------- 123 (221)
T ss_dssp CCCEEECCCSSCCCCSCBEEEEEESSSCSC-EEECCCCCCCCCEEEEEE-------------------------------
T ss_pred CCceEEEccCChHHCeEEEEEEEeCCCCce-EEEEEEEEEECCCceeec-------------------------------
Confidence 34689999999999999999999865 433 445666665444322110
Q ss_pred cccccccccCCCCCCCeE-EEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeec--CCCeeeEEEcccCCCCCeEEEEEE
Q psy15667 194 KIESFAFPFDGLPEGART-RVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDL--DSFSSLLSINSVSAAHSGEYTCVA 270 (286)
Q Consensus 194 ~~~~~~~~~~~~~~g~~~-~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a 270 (286)
.....+|+.+ .|.|.+..+.|.+.+.|+|++.............. ......|.|..+..+|+|.|+|.|
T Consensus 124 --------~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a 195 (221)
T 3eow_R 124 --------QKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKV 195 (221)
T ss_dssp --------ECCCCCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEE
T ss_pred --------CCcccCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEE
Confidence 0011456666 47887766778888888887543321110000000 123467999999999999999999
Q ss_pred EecccceeeEEEEEE
Q psy15667 271 SNTAAQARYSSKLQV 285 (286)
Q Consensus 271 ~N~~g~~~~~~~L~V 285 (286)
.|..+....++.|.+
T Consensus 196 ~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 196 EHESFEKPQLLTVSL 210 (221)
T ss_dssp CCSCSSSCEEEEECC
T ss_pred ECCCCCCCeEEEEEE
Confidence 999988777766643
No 161
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.78 E-value=3.7e-17 Score=134.02 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=75.9
Q ss_pred ceEEEccCCCCCCeeEEEEEEcCCcc----eeeeeeEEEEcCCCceecC-CceEEecCCCEEEEeeEeeecCC-----eE
Q psy15667 117 TSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLGGLPYVRLI-PKVTAIDGEGLSIKCPVAGYPIE-----EV 186 (286)
Q Consensus 117 ~~l~i~~v~~~d~G~Y~C~a~~~~g~----~~~~~~~l~v~~~~~~~~~-~~~~~~~g~~~~l~c~~~~~p~~-----~v 186 (286)
..|.|.++.++|+|.|+|.+.|..|. .......|.|...+.+... ....+.+|++++|.|.+.+.|.+ .+
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v 158 (256)
T 1nqb_A 79 AYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYL 158 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCE
T ss_pred EEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEE
Confidence 46888888888888888888876542 1112345666554443322 23456667777777777665543 55
Q ss_pred EEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC------------CCCCCceeeecCCCeeeEE
Q psy15667 187 HWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL------------SPRFPVNVSDLDSFSSLLS 254 (286)
Q Consensus 187 ~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~------------~~~~~~~~~~~~~~~~~L~ 254 (286)
.|.+.. +|..+ ....++.+.. ......|.
T Consensus 159 ~W~k~~--------------------------------------~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~ 199 (256)
T 1nqb_A 159 EWYLQK--------------------------------------PGQSPKLLIYKVSNRFSGVPDRFSGSG-SGTDFTLK 199 (256)
T ss_dssp EEEEEC--------------------------------------TTSCEEEEEETTTEECTTCCTTEEEEE-ETTEEEEE
T ss_pred EEEEEC--------------------------------------CCCCcEEEEEEeCCCCCccCCcEEEEc-cCCEEEEE
Confidence 555421 22211 0012222221 12356799
Q ss_pred EcccCCCCCeEEEEEEEecccc-eeeEEEEEE
Q psy15667 255 INSVSAAHSGEYTCVASNTAAQ-ARYSSKLQV 285 (286)
Q Consensus 255 i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~L~V 285 (286)
|.++..+|+|.|+|.|.|..+. ....+.|.|
T Consensus 200 I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V 231 (256)
T 1nqb_A 200 ISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEI 231 (256)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred ECCCChHHCEEEEEEEccCCceEECCCEEEEE
Confidence 9999999999999999985321 222344555
No 162
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.78 E-value=3.7e-17 Score=133.61 Aligned_cols=35 Identities=29% Similarity=0.485 Sum_probs=29.2
Q ss_pred eEeccccccccCCCcEEEEEEeecCC--CCeeEEeeC
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD 39 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~ 39 (286)
+...+..+++.+|++++|.|.+.+.+ .+.+.|+|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~ 40 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQ 40 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEe
Confidence 44567778999999999999998854 779999983
No 163
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.78 E-value=1.9e-17 Score=135.45 Aligned_cols=73 Identities=19% Similarity=0.340 Sum_probs=46.4
Q ss_pred ccccccccCCCcEEEEEEeecC--CCCeeEEeeCC--EEc----C--------CCCeeEeceEEecccceeEEEEEcccc
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLDG--FEL----P--------TNNRFVIGQFVSGHGDVISHVNISHVT 71 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~~--~~l----~--------~~~~~~~~~~~~~~~~~~~~l~I~~~~ 71 (286)
.+..+.+.+|++++|.|.+.+. |.+.+.|+|++ ..+ . ...|+.... .+ ....|.|.+++
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~-~~~~L~I~~v~ 82 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK----SG-TSASLAITGLQ 82 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE----ET-TEEEEEECSCC
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc----cC-CEEEEEECCCC
Confidence 4556789999999999999987 88899999853 111 0 112332210 11 11246677777
Q ss_pred cCCCeEEEEEEEcC
Q psy15667 72 VEDGGEYACVAENR 85 (286)
Q Consensus 72 ~~D~G~Y~C~a~n~ 85 (286)
.+|+|.|.|.+.|.
T Consensus 83 ~~DsG~Y~C~~~~~ 96 (256)
T 3ux9_B 83 SEDEADYYCQVRDN 96 (256)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhhCEEEEEEEEEC
Confidence 77777777766653
No 164
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.78 E-value=2e-17 Score=130.52 Aligned_cols=71 Identities=17% Similarity=0.251 Sum_probs=45.7
Q ss_pred eeEeccccc--cccCCCcEEEEEEeecCCCC--eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 4 ILTYSFIEQ--TLQPGPAVSLKCIASGNPTP--DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 4 ~~~~~~~~~--~~~~G~~~~l~C~~~g~p~p--~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.|.+.+.+. ++.+|++++|.|.+ +.|.| .|.|.+.+..+ .+... . .+ ...|.|.+++.+|+|.|.
T Consensus 7 ~~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~----~-~~--~~~L~I~~v~~~d~G~Y~ 75 (210)
T 1gsm_A 7 PLQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQS----D-TG--RSVLTVRNASLSAAGTRV 75 (210)
T ss_dssp SEEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEE----E-SS--EEEEEECSCCGGGCEEEE
T ss_pred CEEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEe----c-CC--ccEEEECccCcccCceEE
Confidence 355556655 89999999999999 89888 99999855444 11110 0 11 123566666666666666
Q ss_pred EEEEcC
Q psy15667 80 CVAENR 85 (286)
Q Consensus 80 C~a~n~ 85 (286)
|.|.|.
T Consensus 76 C~a~n~ 81 (210)
T 1gsm_A 76 CVGSCG 81 (210)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 666553
No 165
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.1e-18 Score=148.23 Aligned_cols=140 Identities=31% Similarity=0.494 Sum_probs=103.4
Q ss_pred ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEEE
Q psy15667 12 QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCEI 91 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~~ 91 (286)
..+.+|++++|.|.+.|.|.+.+.|++++..+....++..... . .+. ..|.|.+++.+|+|.|+|.|.|..|....
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~-~-~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 208 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKL-R-HQQ--WSLVMESVVPSDRGNYTCVVENKFGSIRQ 208 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCC-C-TTT--TEEEECSCCGGGCCCEEEEEEETTEEEEE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceec-c-cce--EEEEECCCCcccCEEEEEEEEeCCCCEEE
Confidence 5688999999999999999999999999998876544311010 0 111 25899999999999999999998875421
Q ss_pred e------------c------------------------CCCCCeeEEEee----CCccCcCCC-----------------
Q psy15667 92 T------------P------------------------YDSGPYLIAWFK----DGRQIPGRT----------------- 114 (286)
Q Consensus 92 ~------------~------------------------~~~~~~~~~W~~----~g~~l~~~~----------------- 114 (286)
. + .+.+++.+.|+| ||..+....
T Consensus 209 ~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 288 (334)
T 1ry7_B 209 TYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDK 288 (334)
T ss_dssp EEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCT
T ss_pred EEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccc
Confidence 1 0 012345799999 776653211
Q ss_pred CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC
Q psy15667 115 SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLP 156 (286)
Q Consensus 115 ~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~ 156 (286)
....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|...+
T Consensus 289 ~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~~ 329 (334)
T 1ry7_B 289 ELEVLSLHNVTFEDAGEYTCLAGNSIGFS-HHSAWLVVLPAE 329 (334)
T ss_dssp TCCCEEECSCCTTSCSEEEEEEEESSCCE-EEEEEEEEECSC
T ss_pred cccEEEEccCCHHHCEEEEEEEeCCCCeE-EEEEEEEEEECC
Confidence 01379999999999999999999999986 456778876543
No 166
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.78 E-value=1.6e-18 Score=145.86 Aligned_cols=173 Identities=20% Similarity=0.250 Sum_probs=124.1
Q ss_pred ccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCC------CCcceEEEccCCCCCCeeEEEEEEcCCccee
Q psy15667 71 TVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGR------TSSTSLVINPVGREDRGIYQCIARRSDGDVA 144 (286)
Q Consensus 71 ~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~ 144 (286)
...+.-...|.+.+. .+.+.+.|+|||..+... .....|.|.++..+|+|.|+|.+.|..|..
T Consensus 19 ~~G~~v~l~C~~~~~----------~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~- 87 (317)
T 2y25_A 19 TGECNVLLKCKVANI----------KKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKD- 87 (317)
T ss_dssp ETTTEEEEEEEEESC----------CTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEE-
T ss_pred CCCCeEEEEEEEcCC----------CCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcE-
Confidence 344555778876552 124689999999887632 123589999999999999999999988764
Q ss_pred eeeeEEEEcCCCcee-cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC
Q psy15667 145 QGSAELQLGGLPYVR-LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP 223 (286)
Q Consensus 145 ~~~~~l~v~~~~~~~-~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~ 223 (286)
.....|.+...|.+. ......+..|+.+.|.|.+. ...|.|.+..+.|.
T Consensus 88 ~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~------------------------------~~~l~c~~~~~~p~ 137 (317)
T 2y25_A 88 KSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAE------------------------------GIQLYSFVTYYVED 137 (317)
T ss_dssp EEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSS------------------------------EEEEEEEBSSCCSS
T ss_pred EEEEEEEEecCccccccCCceecccCCCeEEEeecc------------------------------ccEEEEEeccCCCC
Confidence 234444443322111 11123345788888888543 35678888777899
Q ss_pred CeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 224 LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 224 ~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 138 ~~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 198 (317)
T 2y25_A 138 LKVNWSHNGSAIRYSDRVKTGVT-GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 198 (317)
T ss_dssp CEEEEEESSSBCCCCSSEEEEEC-SSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred cEEEEEECCEECCCCCCeEEecc-CCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEee
Confidence 99999999999877666554432 23456999999999999999999999998888877753
No 167
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.78 E-value=1.6e-16 Score=130.01 Aligned_cols=36 Identities=17% Similarity=0.351 Sum_probs=29.3
Q ss_pred eeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD 39 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~ 39 (286)
+....+..+++.+|++++|.|.+.+. |.+.+.|+|.
T Consensus 10 v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 47 (257)
T 3gkz_A 10 VQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQ 47 (257)
T ss_dssp EEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEE
T ss_pred EEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEE
Confidence 33455677789999999999999984 4789999984
No 168
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.78 E-value=1.5e-18 Score=122.96 Aligned_cols=86 Identities=26% Similarity=0.471 Sum_probs=75.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.|+|.|.|+|+|||..|..+.++.+.. .+ ....|.|.+++.+|+|.|+|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~----~~-~~~~L~I~~v~~~D~G~Y~C 86 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA----DG-AEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE----ET-TEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEee----cC-ceEEEEEecCChhhCEEEEE
Confidence 38999999999999999999999999999999999999999998888876532 22 23469999999999999999
Q ss_pred EEEcCCEEEEE
Q psy15667 81 VAENRAGTCEI 91 (286)
Q Consensus 81 ~a~n~~g~~~~ 91 (286)
.|.|..|....
T Consensus 87 ~a~N~~G~~~~ 97 (107)
T 3knb_B 87 RARNAAGEAYA 97 (107)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCCEEEE
Confidence 99999997654
No 169
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.77 E-value=7.2e-19 Score=141.86 Aligned_cols=191 Identities=21% Similarity=0.319 Sum_probs=87.2
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
+.+...+.++.+.+|++++|.|.+.+.|.+.+.|+|++..- ...+. +........+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~--~~~~~----------------~~~~~~~~~~------ 79 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGE--PPRLL----------------ISDGNTLRPG------ 79 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTS--CCEEE----------------ECTTSCBCTT------
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCC--CcEEE----------------EEcCCccCCC------
Confidence 44555677888999999999999999888899999863210 01110 1000000000
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC---CCcee
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG---LPYVR 159 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~---~~~~~ 159 (286)
. ... + .+........|.|.++..+|+|.|.|.+.|..+........|.|.. .|.+.
T Consensus 80 -----------~-~~r--~-------~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~ 138 (233)
T 3bqu_C 80 -----------V-PSR--F-------SSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVS 138 (233)
T ss_dssp -----------S-CTT--C-------CCCEEEEEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEE
T ss_pred -----------C-Ccc--E-------EeeccCCEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEE
Confidence 0 000 0 0000011236888888888888888888776543222223344432 12111
Q ss_pred c-CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCC
Q psy15667 160 L-IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSP 237 (286)
Q Consensus 160 ~-~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~ 237 (286)
. .+... +.+|+.+.|.|.+....|+ +.+.|+|+|..+..
T Consensus 139 ~~~~~~~---------------------------------------~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 179 (233)
T 3bqu_C 139 IFPPSSE---------------------------------------QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 179 (233)
T ss_dssp EECCCHH---------------------------------------HHHTTEEEEEEEEEEEBSSCEEEEEEEC-----C
T ss_pred EeCCCHH---------------------------------------hhcCCceEEEEEEccccCCceEEEEEECCeeCCC
Confidence 1 00000 1135566666665543344 36888888887654
Q ss_pred C-CC-ceeee-cC---CCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 238 R-FP-VNVSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 238 ~-~~-~~~~~-~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
. .. ..... .+ .....|.|..+..+|+|.|+|.|.|.....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 225 (233)
T 3bqu_C 180 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 225 (233)
T ss_dssp CEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---C
T ss_pred CceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCCc
Confidence 3 10 00000 00 113468899999999999999999986543
No 170
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.77 E-value=2.1e-18 Score=139.15 Aligned_cols=75 Identities=19% Similarity=0.386 Sum_probs=51.8
Q ss_pred CCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCc-eeee-cC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 207 EGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPV-NVSD-LD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~-~~~~-~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+|+.+.|.|.+....|+ +.+.|+|+|..+...... .... .+ .....|.|..+..+|+|.|+|.|.|..+....+
T Consensus 149 ~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 228 (234)
T 2j6e_L 149 QANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 228 (234)
T ss_dssp TTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEE
T ss_pred cCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEe
Confidence 46677888877654554 589999999987543110 0000 00 123568899999999999999999998876555
Q ss_pred E
Q psy15667 281 S 281 (286)
Q Consensus 281 ~ 281 (286)
+
T Consensus 229 ~ 229 (234)
T 2j6e_L 229 V 229 (234)
T ss_dssp E
T ss_pred c
Confidence 4
No 171
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.77 E-value=1.9e-18 Score=137.08 Aligned_cols=70 Identities=19% Similarity=0.338 Sum_probs=43.7
Q ss_pred CCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCceee-ecCC---CeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 207 EGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVS-DLDS---FSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~-~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
+|+.+.|.|.+....|+ +.+.|+|+|..+......... ..++ ....|.|.....+|.|.|+|.|.|....
T Consensus 123 ~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 123 AKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred cCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 36667777766543444 488999999877532111111 1111 1234667777777899999999998653
No 172
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.77 E-value=8.7e-19 Score=140.28 Aligned_cols=44 Identities=16% Similarity=0.230 Sum_probs=36.4
Q ss_pred CCeeEecccccc--ccCCCcEEEEEEeecC---CC-CeeEEeeCCEEcCC
Q psy15667 2 PPILTYSFIEQT--LQPGPAVSLKCIASGN---PT-PDIGWTLDGFELPT 45 (286)
Q Consensus 2 ~p~~~~~~~~~~--~~~G~~~~l~C~~~g~---p~-p~v~W~~~~~~l~~ 45 (286)
+|.+...+.... +.+|++++|.|.+.|. |. +.|.|+|++..+..
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~ 58 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHT 58 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECC
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccC
Confidence 677777777766 8999999999999987 43 79999999987753
No 173
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.77 E-value=1.2e-16 Score=130.90 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=26.9
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD 39 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~ 39 (286)
.+...++.+|++++|.|.+.+.| .+.+.|++.
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQ 41 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEE
Confidence 44567799999999999999876 689999974
No 174
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.77 E-value=3.1e-17 Score=133.39 Aligned_cols=37 Identities=11% Similarity=0.198 Sum_probs=32.2
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
+.|...+..+++.+|++++|.|.+.+.|.+.+.|+|.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 38 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQ 38 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEE
Confidence 3566677778999999999999999999999999983
No 175
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.77 E-value=7.6e-18 Score=141.90 Aligned_cols=152 Identities=20% Similarity=0.254 Sum_probs=108.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+|.+........+..|+.+.|.|.+. +.|.+.+.|++++..+....+..... .+.......|.|.....+|+|.|+|
T Consensus 117 ~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~--~~~~~~~s~l~i~~~~~~d~g~Y~C 194 (313)
T 4fqp_A 117 KPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFL--SGTVTVTSLWILVPSSQVDGKNVTC 194 (313)
T ss_dssp CCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSS--TTCEEEEEEEEECCCGGGTTCEEEE
T ss_pred CCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeec--ccccccceeeeecccccccCeeEEE
Confidence 56677777777888999999999765 78999999999988775433322110 0011112358899999999999999
Q ss_pred EEEcCCEE----EE------------Eec------------------CCCCCe-eEEEeeCCccCcCCC--CcceEEEcc
Q psy15667 81 VAENRAGT----CE------------ITP------------------YDSGPY-LIAWFKDGRQIPGRT--SSTSLVINP 123 (286)
Q Consensus 81 ~a~n~~g~----~~------------~~~------------------~~~~~~-~~~W~~~g~~l~~~~--~~~~l~i~~ 123 (286)
.|.|..+. .. +.+ .+.+++ .|.|+|+|..+.... ....|.|.+
T Consensus 195 ~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~ 274 (313)
T 4fqp_A 195 KVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRP 274 (313)
T ss_dssp EEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECC
T ss_pred EEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECc
Confidence 99986431 11 110 011234 689999999886532 346799999
Q ss_pred CCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC
Q psy15667 124 VGREDRGIYQCIARRSDGDVAQGSAELQLGGLP 156 (286)
Q Consensus 124 v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~ 156 (286)
+..+|+|.|+|.|.|..|.. ...+.|.|...|
T Consensus 275 v~~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~P 306 (313)
T 4fqp_A 275 VDKPINTTLICNVTNALGAR-QAELTVQVKEGP 306 (313)
T ss_dssp CSSCCEEEEEEEEECSSCEE-EEEEEEEEECCC
T ss_pred CChhhCEEEEEEEEeCCCcE-EEEEEEEEEeCC
Confidence 99999999999999999975 456778776544
No 176
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=1e-16 Score=133.18 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=29.5
Q ss_pred EeccccccccCCCcEEEEEEeecCC--CCeeEEeeCC
Q psy15667 6 TYSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG 40 (286)
Q Consensus 6 ~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~ 40 (286)
...+..+.+.+|++++|.|.+.+.| .+.+.|+|++
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~ 66 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQG 66 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeC
Confidence 4566778899999999999999875 6899999864
No 177
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.76 E-value=3.4e-17 Score=134.84 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=33.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCC------CCeeEEeeC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNP------TPDIGWTLD 39 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p------~p~v~W~~~ 39 (286)
.+.|...+.++++.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 48 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQ 48 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEE
Confidence 46677788889999999999999999887 688999985
No 178
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.76 E-value=2.5e-18 Score=144.40 Aligned_cols=145 Identities=20% Similarity=0.286 Sum_probs=102.2
Q ss_pred ccccccccCCCcEEEEEEe-ecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCC
Q psy15667 8 SFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRA 86 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~ 86 (286)
.+.......|+.+.|.|.+ .|.|.|.++|++++..+......... ........|.|.++..+|+|.|+|.|.|..
T Consensus 120 ~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~----~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~ 195 (308)
T 4fom_A 120 GPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPN----ETATIISQYKLFPTRFARGRRITCVVKHPA 195 (308)
T ss_dssp CSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTT----SCEEEEEEEEECCCGGGTTCEEEEEEECTT
T ss_pred ccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeee----ecccccccceEEeeeecCCccEEEEEEccC
Confidence 4445567789999999975 58999999999999887543222110 111123458999999999999999999865
Q ss_pred EE----EEEe------c------------------------CCCCCe-eEEEeeCCccCcCCC---CcceEEEccCCCCC
Q psy15667 87 GT----CEIT------P------------------------YDSGPY-LIAWFKDGRQIPGRT---SSTSLVINPVGRED 128 (286)
Q Consensus 87 g~----~~~~------~------------------------~~~~~~-~~~W~~~g~~l~~~~---~~~~l~i~~v~~~d 128 (286)
+. ..+. | .+.+++ .+.|+|++..+.... ....|.|.++..+|
T Consensus 196 ~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d 275 (308)
T 4fom_A 196 LEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNY 275 (308)
T ss_dssp CSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCC
T ss_pred CCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhh
Confidence 42 1110 0 001234 689999998876432 23456788999999
Q ss_pred CeeEEEEEEcCCcceeeeeeEEEEcCCCc
Q psy15667 129 RGIYQCIARRSDGDVAQGSAELQLGGLPY 157 (286)
Q Consensus 129 ~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~ 157 (286)
+|.|+|.|.|..|.. +.++.|.|..+|.
T Consensus 276 ~G~Y~C~A~N~~G~~-~~~~~l~V~~~P~ 303 (308)
T 4fom_A 276 SGVYICKVTNSLGQR-SDQKVIYISDPPH 303 (308)
T ss_dssp CSEEEEEEEETTEEE-EEEEECCEECCC-
T ss_pred CEEEEEEEEeCCCcE-EEEEEEEEEcCCC
Confidence 999999999999976 4567788876653
No 179
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.76 E-value=2.4e-17 Score=130.79 Aligned_cols=76 Identities=17% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
+.+|+.+.|.|.+....|.| .+.|++++..+.......+.... .....|.|..+..+| |.|+|.|.|..|......
T Consensus 130 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 130 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 45677777777776444666 88888888754211000011100 113568999998877 999999999999865543
No 180
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.76 E-value=3e-17 Score=131.39 Aligned_cols=207 Identities=17% Similarity=0.138 Sum_probs=112.0
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.+..+.+.+|++++|.|.+.+.| .+.+.|+|++.. ....+.. .+..-..++...|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~--~~~~~~~--------------~~~~~~~~~~~~~~------ 63 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPG--KALEWLG--------------FIRNKANGYTTEYS------ 63 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTT--SCCEEEE--------------EECCGGGTTCEEEC------
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCC--CCcEEEE--------------EEccCCcccccccC------
Confidence 45567899999999999999876 789999985311 0011110 01000000000110
Q ss_pred CEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc----eeeeeeEEEEcCCCceecC
Q psy15667 86 AGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLGGLPYVRLI 161 (286)
Q Consensus 86 ~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~----~~~~~~~l~v~~~~~~~~~ 161 (286)
+.. ...+....++ ......|.|.++.++|+|.|.|.+.+..+. .......|.|...+.
T Consensus 64 -------~~~--~~R~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~---- 125 (222)
T 1q9r_B 64 -------PSV--KGRFTISRDN-----SQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKT---- 125 (222)
T ss_dssp -------TTT--BTTEEEEEET-----TTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCC----
T ss_pred -------ccc--CCceEEEEEC-----CCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCC----
Confidence 000 0011111111 012356888899999999999988876531 111234555532110
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCC
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFP 240 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~ 240 (286)
..|.+.-. + +...+.+|+.+.|.|.+....|.| .+.|+++|..+.....
T Consensus 126 --------------------~~P~i~~~--~--------~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~ 175 (222)
T 1q9r_B 126 --------------------TPPSVYPL--A--------PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTF 175 (222)
T ss_dssp --------------------BCCEEEEE--C--------CCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEE
T ss_pred --------------------CCCeEEEc--c--------ccccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEec
Confidence 00111100 0 011245677777777776444666 8888888876532100
Q ss_pred ceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 241 VNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
......+ .....|.|.++..+| |.|+|.|.|..|.......|.+
T Consensus 176 ~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~~ 221 (222)
T 1q9r_B 176 PAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 221 (222)
T ss_dssp EEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred cccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEeccC
Confidence 0000000 113468999999999 9999999999998777766654
No 181
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.75 E-value=1.4e-17 Score=129.45 Aligned_cols=111 Identities=17% Similarity=0.318 Sum_probs=72.7
Q ss_pred ceEEEccCCCCCCeeEEEEEEcCCcceee-eeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcc
Q psy15667 117 TSLVINPVGREDRGIYQCIARRSDGDVAQ-GSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKI 195 (286)
Q Consensus 117 ~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~-~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~ 195 (286)
++|.|.++.++|+|.|+|.+.|..|.... ..+.|.|.... +.|.+.+
T Consensus 66 gsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~-------------------------~~P~i~~------- 113 (182)
T 1hnf_A 66 GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERV-------------------------SKPKISW------- 113 (182)
T ss_dssp SCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCC-------------------------CCCEEEE-------
T ss_pred CCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcC-------------------------CCCEEEE-------
Confidence 47899999999999999999887775422 34456654321 0111111
Q ss_pred cccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 196 ESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 196 ~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.+..+.|.|.+. +.|.+.+.|+++|..+ ... ...|.+. ...+|+|.|+|.|.|.+|
T Consensus 114 -----------~~~~v~L~C~~~-~~p~~~~~W~~~g~~l-~~~----------~~~i~~~-~~~~d~G~Y~C~a~N~~~ 169 (182)
T 1hnf_A 114 -----------TCINTTLTCEVM-NGTDPELNLYQDGKHL-KLS----------QRVITHK-WTTSLSAKFKCTAGNKVS 169 (182)
T ss_dssp -----------ETTTTEEEEECS-SCSSCEEEEEESSCEE-EEE----------SSCEEEE-CCSCEEEEEEEEEECSSC
T ss_pred -----------ccCcEEEEeEcc-CCCCCEEEEEECCEEC-CCC----------CcEEEEe-cccCCCcEEEEEEEeCCC
Confidence 011356777664 4457889999999876 110 1233333 257899999999999999
Q ss_pred ceeeEEEE
Q psy15667 276 QARYSSKL 283 (286)
Q Consensus 276 ~~~~~~~L 283 (286)
.......+
T Consensus 170 ~~~s~~~~ 177 (182)
T 1hnf_A 170 KESSVEPV 177 (182)
T ss_dssp EEEEEEEE
T ss_pred CcEEccee
Confidence 88877665
No 182
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.75 E-value=4.3e-18 Score=119.01 Aligned_cols=85 Identities=25% Similarity=0.514 Sum_probs=72.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC--eeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN--RFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.++.+.+|+++.|.|.+.|.|.|.|.|+|||..|..+. ++.+.. .+ ....|.|.+++.+|+|.|+
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN----TD-DLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE----CS-SEEEEEESSCCGGGCEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeec----cc-ceEEEEEcCCCccCCEEEE
Confidence 8999999999999999999999999999999999999999997543 443321 22 2346999999999999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.|..|..+.
T Consensus 80 C~a~N~~G~~~~ 91 (100)
T 3knb_A 80 LSLGNEFGSDSA 91 (100)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEECCCEEEE
Confidence 999999997654
No 183
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.75 E-value=5e-17 Score=133.33 Aligned_cols=209 Identities=13% Similarity=0.109 Sum_probs=97.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
++|.|...+.++.+.+|++++|.|.+.+.|.+.+.|+|.... ....+.. ... .......|
T Consensus 1 ~s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~--~~~~~~~--------------~~~--~~~~~~~~-- 60 (259)
T 3omz_A 1 MSSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEG--KAPQRLL--------------YYD--SYTSSVVL-- 60 (259)
T ss_dssp ----------CEEEETTCCEEEECCC-----CEEEEEEECTT--SCCEEEE--------------EEE--TTTCCEEE--
T ss_pred CccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCC--CCcEEEE--------------EEe--cCcCcccc--
Confidence 478888899999999999999999999999999999984210 0111110 000 00000000
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcCC---
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGGL--- 155 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~~--- 155 (286)
.......... ..+ .......|.|.++.++|+|.|+|.+.|..+. .......|.|...
T Consensus 61 -----------~~~~~~r~~~--~~~-----~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~ 122 (259)
T 3omz_A 61 -----------ESGISPGKYD--TYG-----STRKNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGS 122 (259)
T ss_dssp -----------CTTCCBTTEE--EEC-----C--CCCEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC----
T ss_pred -----------CCCCCcceeE--eec-----CCCCeEEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCC
Confidence 0000000000 000 0112356888888888888888888876542 1122345555432
Q ss_pred --------------Cceec-CCceEEecCCCEEEEeeEeee-cCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeec
Q psy15667 156 --------------PYVRL-IPKVTAIDGEGLSIKCPVAGY-PIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTH 219 (286)
Q Consensus 156 --------------~~~~~-~~~~~~~~g~~~~l~c~~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~ 219 (286)
+.+.. .....+.+|++++|.|.+.+. |.+.+.|.+..+. ....+
T Consensus 123 ~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~--------------~~~~~------ 182 (259)
T 3omz_A 123 ADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPS--------------KEMIF------ 182 (259)
T ss_dssp --------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTT--------------CCEEE------
T ss_pred ccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCC--------------CCcEE------
Confidence 12222 223566677777777776663 5667777663211 00000
Q ss_pred CCCCCeEEEEeCCeeCCCCCCceeee-cCCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 220 GDPPLTIRWLKDGKPLSPRFPVNVSD-LDSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 220 ~~p~~~~~W~~~g~~~~~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
+.+...........++.+.. .......|.|.+++.+|+|.|.|.+.+.
T Consensus 183 ------~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 183 ------LIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp ------EEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred ------EEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 00000000000011222221 1122456999999999999999999853
No 184
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.74 E-value=2.2e-17 Score=135.06 Aligned_cols=151 Identities=18% Similarity=0.290 Sum_probs=107.5
Q ss_pred cCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEE
Q psy15667 72 VEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ 151 (286)
Q Consensus 72 ~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~ 151 (286)
..+.-...|.+... ..+..+.|+|||..+... ...|.|.++..+|+|.|+|.+.|..+. ..+.|.
T Consensus 15 ~G~~v~l~C~~~~~----------~~~~~~~W~~~g~~~~~~--~~~l~i~~~~~~d~G~Y~C~~~~~~~s---~~~~l~ 79 (262)
T 3rjd_A 15 QEETVTLHCEVLHL----------PGSSSTQWFLNGTATQTS--TPSYRITSASVNDSGEYRCQRGLSGRS---DPIQLE 79 (262)
T ss_dssp TTCCEEEEEECSSC----------CCTTCEEEEETTEECSCC--SSEEEESSCCGGGCEEEEEEESSSCCC---CCEEEE
T ss_pred CCCeEEEEEECCCC----------CCCceEEEEECCEEeecc--CCeEEEecCCcccCeEEEEEEecCCcc---ccEEEE
Confidence 44555677765432 112379999999987643 567999999999999999999886543 245566
Q ss_pred EcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeC
Q psy15667 152 LGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKD 231 (286)
Q Consensus 152 v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~ 231 (286)
|...+.....+. ..+.+|+.+.|.|.+..+.|.+.+.|+|+
T Consensus 80 v~~~~~~~~~~~---------------------------------------~~~~~g~~v~l~C~~~~~~p~~~v~W~~~ 120 (262)
T 3rjd_A 80 IHRGWLLLQVSS---------------------------------------RVFTEGEPLALRCHAWKDKLVYNVLYYRN 120 (262)
T ss_dssp EECSSEEEEESC---------------------------------------SEEETTSCEEEEEEEGGGCCCEEEEEEET
T ss_pred EeccceEecCCC---------------------------------------eEEecCCeEEEEEEccCCCCCceEEEEEC
Confidence 643332111111 12446777777777766778889999999
Q ss_pred CeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 232 GKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
|..+... .....|.|.++..+|+|.|+|.|.|..+.....+.|.|
T Consensus 121 g~~~~~~---------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V 165 (262)
T 3rjd_A 121 GKAFKFF---------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTV 165 (262)
T ss_dssp TEEEEEE---------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEE
T ss_pred Ccccccc---------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEe
Confidence 9876321 11357899999999999999999999988888777776
No 185
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.74 E-value=1e-16 Score=133.14 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=29.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~ 39 (286)
+.+.. +..+++.+|++++|.|.+.+. |.+.+.|++.
T Consensus 2 ~~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (280)
T 3fku_X 2 VQLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQ 39 (280)
T ss_dssp CCEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCB
T ss_pred CeEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEe
Confidence 34555 788899999999999999875 6688999974
No 186
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.74 E-value=9.1e-17 Score=128.42 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=47.2
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCC--CCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLKDGKPLS--PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
+.+|+.+.|.|.+....|.| .+.|++++.... ......-.......+.|.|..+..+| |.|+|.|.|..|....++
T Consensus 137 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 137 DTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp CSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 34566666666665443555 777777765310 00000000000114578999998867 999999999999877765
Q ss_pred EE
Q psy15667 282 KL 283 (286)
Q Consensus 282 ~L 283 (286)
.+
T Consensus 216 ~~ 217 (220)
T 1pz5_B 216 EI 217 (220)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 187
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.74 E-value=9.5e-18 Score=129.10 Aligned_cols=165 Identities=14% Similarity=0.151 Sum_probs=103.1
Q ss_pred cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 11 EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
.+.+.+|++|+|.|.+. .|.+.|.|++++..+. .+ ..+. ..+ + +.
T Consensus 4 ~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~--------~~---~~~~---~~~------~-~~------------- 48 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVA--------EL---ENSE---FRA------F-SS------------- 48 (171)
T ss_dssp EEEEETTCCEEECCCCS-SCCSCEEEEETTEEEE--------EE---ETTE---EEE------C-GG-------------
T ss_pred EEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEE--------EE---cCCC---ccc------c-cc-------------
Confidence 35678999999999885 4889999999875321 00 0000 000 0 00
Q ss_pred EecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCC
Q psy15667 91 ITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGE 170 (286)
Q Consensus 91 ~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~ 170 (286)
|++...+ ....++|.|.++..+|+|.|+|.+.|..| ...+.|.|..++.
T Consensus 49 -------------~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~---~~~~~L~V~~~~~------------- 97 (171)
T 1ccz_A 49 -------------FKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESPNITD---TMKFFLYVLEMVS------------- 97 (171)
T ss_dssp -------------GTTSEEE--CTTTCCEEECSCCGGGCEEEEEECTTCCS---CEEEEEEEECCCC-------------
T ss_pred -------------cCCcEEE--eCCCCeEEECCCChhhCceEEEEEeCCCC---cEEEEEEEECcCC-------------
Confidence 0110001 01335799999999999999999998776 2356677653321
Q ss_pred CEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCe
Q psy15667 171 GLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFS 250 (286)
Q Consensus 171 ~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~ 250 (286)
.|.+.+.. . . ..|.|.+. +.|.|.+.|+|+|..+.... .
T Consensus 98 ------------~p~i~~~~------------~---~---~~L~C~~~-~~p~p~i~W~~~~~~l~~~~----------~ 136 (171)
T 1ccz_A 98 ------------KPMIYWEC------------S---N---ATLTCEVL-EGTDVELKLYQGKEHLRSLR----------Q 136 (171)
T ss_dssp ------------CCEEEEET------------T---T---TEEEEECS-SCSSCEEEEEETTEEEEEES----------S
T ss_pred ------------CCEEEEec------------C---C---cEEEEEeC-CCCCcEEEEEECCEECcCCc----------c
Confidence 11221100 0 0 26788775 45778999999998764221 1
Q ss_pred eeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 251 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 251 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
..|.+. ...|+|.|+|.|.|.+|....++.|.
T Consensus 137 ~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 137 KTMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp SEEEEE--CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred eEEEEe--ccCCCceEEEEEEcccCcccceeEEe
Confidence 123333 47899999999999999988777653
No 188
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.74 E-value=1.3e-17 Score=147.37 Aligned_cols=187 Identities=17% Similarity=0.298 Sum_probs=119.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CCC-eeEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PTP-DIGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p-~v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+.. ....... +.-.....|.|.++..+| |.
T Consensus 123 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~----~~~~~~s~L~i~~~~~~d-g~ 197 (444)
T 1igt_B 123 APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQS----DLYTLSSSVTVTSSTWPS-QS 197 (444)
T ss_dssp CCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEET----TEEEEEEEEEECSTTTTT-SC
T ss_pred CCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCccccC----CcEEEEEEEEEchhhcCC-Ce
Confidence 4555444444556899999999999985 777 9999999876421 1111100 000112358899999999 99
Q ss_pred EEEEEEcCCEEE----E----------------------------Eec-------C------------CCC--C--eeEE
Q psy15667 78 YACVAENRAGTC----E----------------------------ITP-------Y------------DSG--P--YLIA 102 (286)
Q Consensus 78 Y~C~a~n~~g~~----~----------------------------~~~-------~------------~~~--~--~~~~ 102 (286)
|+|.|.|..+.. . +.+ . +.+ | +.+.
T Consensus 198 Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~ 277 (444)
T 1igt_B 198 ITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQIS 277 (444)
T ss_dssp CEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEE
T ss_pred EEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEE
Confidence 999999875531 0 100 0 011 2 4799
Q ss_pred EeeCCccCcCCC-------------CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEE----EEcCCCceecCCc-e
Q psy15667 103 WFKDGRQIPGRT-------------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAEL----QLGGLPYVRLIPK-V 164 (286)
Q Consensus 103 W~~~g~~l~~~~-------------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l----~v~~~~~~~~~~~-~ 164 (286)
|+|||..+.... ....|.|.++..+|+|.|+|.|.|..+... ....+ .+...|.+...+. .
T Consensus 278 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~~P~v~~~~~~~ 356 (444)
T 1igt_B 278 WFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAP-IERTISKPKGSVRAPQVYVLPPPE 356 (444)
T ss_dssp EEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSC-EEEEEECCCCCCBCCEEEEECCCG
T ss_pred EEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCc-eEEEEeccCCCCCCCEEEEeCCCh
Confidence 999998774321 124799999999999999999999877641 12222 2334454433221 1
Q ss_pred EEecCCCEEEEeeEeee-cCC-eEEEEEcCCc
Q psy15667 165 TAIDGEGLSIKCPVAGY-PIE-EVHWEKVPPK 194 (286)
Q Consensus 165 ~~~~g~~~~l~c~~~~~-p~~-~v~w~~~~~~ 194 (286)
....+..++|.|.+.|. |.+ .|.|.+....
T Consensus 357 ~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~ 388 (444)
T 1igt_B 357 EEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKT 388 (444)
T ss_dssp GGTTSSEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred HHccCCeEEEEEEEEeeeCCCCEEEEEECCEE
Confidence 11234459999999995 555 8999996543
No 189
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.74 E-value=1.5e-17 Score=139.96 Aligned_cols=132 Identities=22% Similarity=0.285 Sum_probs=99.0
Q ss_pred ccccCCCcEEEEEEe------ecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE-c
Q psy15667 12 QTLQPGPAVSLKCIA------SGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE-N 84 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~------~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~-n 84 (286)
..+.+|+++.|.|.+ .|+|.|.+.|++++..+..+..... . .+. .|.|.+++.+|+|.|+|.|. |
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~----~-~~~---~L~i~~v~~~d~G~Y~C~a~~n 184 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS----G-VKD---RLIVMNVAEKHRGNYTCHASYT 184 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEE----E-ETT---EEEESSCCGGGCEEEEEEEEEE
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEe----e-cCc---eEEEEeceehhCcEEEEEEEcC
Confidence 568899999999998 8999999999999999865432211 1 122 48899999999999999999 6
Q ss_pred CCEEEE-------E--e-------c------------------------CCCCCeeEEEeeCCccCcCCC----------
Q psy15667 85 RAGTCE-------I--T-------P------------------------YDSGPYLIAWFKDGRQIPGRT---------- 114 (286)
Q Consensus 85 ~~g~~~-------~--~-------~------------------------~~~~~~~~~W~~~g~~l~~~~---------- 114 (286)
..|... + . | .+.+++.+.|++||..+....
T Consensus 185 ~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~ 264 (315)
T 1itb_B 185 YLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 264 (315)
T ss_dssp ETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEE
T ss_pred CCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceee
Confidence 665431 0 0 0 011345789999999886422
Q ss_pred ----------CcceEEEccCCCCC-CeeEEEEEEcCCcceeeeeeEEEE
Q psy15667 115 ----------SSTSLVINPVGRED-RGIYQCIARRSDGDVAQGSAELQL 152 (286)
Q Consensus 115 ----------~~~~l~i~~v~~~d-~G~Y~C~a~~~~g~~~~~~~~l~v 152 (286)
....|.|.++..+| +|.|+|.|.|..|... ..+.|.|
T Consensus 265 ~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~-~~~~l~v 312 (315)
T 1itb_B 265 ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA-AYIQLIY 312 (315)
T ss_dssp CCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEE-EEEEEEC
T ss_pred eccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCcee-EEEEEEe
Confidence 12379999999999 9999999999999763 4566654
No 190
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.74 E-value=4.6e-17 Score=138.22 Aligned_cols=146 Identities=20% Similarity=0.231 Sum_probs=99.7
Q ss_pred CCeeEEEeeCCccCcCC---CCcceEEEccCCCCCCe-eEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCE
Q psy15667 97 GPYLIAWFKDGRQIPGR---TSSTSLVINPVGREDRG-IYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGL 172 (286)
Q Consensus 97 ~~~~~~W~~~g~~l~~~---~~~~~l~i~~v~~~d~G-~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~ 172 (286)
+.+.+.|+|++..+... .....|.|.++..+|+| .|+|.+.|..|........+.+...|.+...
T Consensus 66 p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~----------- 134 (329)
T 3oq3_B 66 KDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPE----------- 134 (329)
T ss_dssp TTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEE-----------
T ss_pred CCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEecc-----------
Confidence 44689999999876432 23578999999999999 9999999988764322222222111110000
Q ss_pred EEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeeecCCCee
Q psy15667 173 SIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDSFSS 251 (286)
Q Consensus 173 ~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~~~~~~~ 251 (286)
.....+.+|+.+.|.|.+. |.| .+.+.|+|++..+...... +... +.
T Consensus 135 ---------------------------~~~~~~~~G~~v~L~C~~~-g~p~~~~i~W~k~~~~l~~~~~~-~~~~---~~ 182 (329)
T 3oq3_B 135 ---------------------------TYELGTHDKYGIDLYCGIL-YAKHYNNITWYKNNQELIIDGTK-YSQS---GQ 182 (329)
T ss_dssp ---------------------------EEETTSSTTTCEEEECCCC-SCCCCCEEEEEETTEECCCSSSS-EEEE---TT
T ss_pred ---------------------------ccceEEeCCCcEEEEeccC-CCCCCceEEEEECCccCCCCCce-EecC---CC
Confidence 0012356788899999765 567 8999999999988533221 1111 36
Q ss_pred eEEEcccCCCCCeEEEEEEEec--ccceeeE----EEEEE
Q psy15667 252 LLSINSVSAAHSGEYTCVASNT--AAQARYS----SKLQV 285 (286)
Q Consensus 252 ~L~i~~v~~~d~G~Y~C~a~N~--~g~~~~~----~~L~V 285 (286)
.|.|.++..+|+|.|+|.|.|. .|..... +.|.|
T Consensus 183 ~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V 222 (329)
T 3oq3_B 183 NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTV 222 (329)
T ss_dssp EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEE
T ss_pred EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEE
Confidence 8999999999999999999997 6655444 55655
No 191
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.73 E-value=1.7e-17 Score=138.07 Aligned_cols=143 Identities=19% Similarity=0.277 Sum_probs=103.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCC-CeeEE-eeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe-EE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPT-PDIGW-TLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG-EY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~-p~v~W-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G-~Y 78 (286)
||.+.....+..+.+|+.+.|.|.+.+ |. +.+.| .+||..+..+.++... ..+ .|.|.+++.+|+| .|
T Consensus 91 ~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~----~~~----~L~i~~v~~~d~G~~Y 161 (290)
T 2o26_X 91 PAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPN----PKA----GITIKNVKRAYHRLCV 161 (290)
T ss_dssp SSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEE----TTT----EEEEESCCGGGTTCEE
T ss_pred CCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeC----CCC----CEEEecccHHHCCCEE
Confidence 344445667778899999999999985 77 99999 5788888766665431 111 4889999999999 99
Q ss_pred EEEEEcCCEEE-----EEec-------------------------------CCCCCee-EEEeeCCccC----cCC----
Q psy15667 79 ACVAENRAGTC-----EITP-------------------------------YDSGPYL-IAWFKDGRQI----PGR---- 113 (286)
Q Consensus 79 ~C~a~n~~g~~-----~~~~-------------------------------~~~~~~~-~~W~~~g~~l----~~~---- 113 (286)
+|.|.|..+.. .+.. .+.+.+. +.|+++|..+ ...
T Consensus 162 ~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~ 241 (290)
T 2o26_X 162 RCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSW 241 (290)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEE
T ss_pred EEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeeccccc
Confidence 99999976542 1110 0012344 9999999873 210
Q ss_pred -------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC
Q psy15667 114 -------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 154 (286)
Q Consensus 114 -------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~ 154 (286)
.....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..
T Consensus 242 ~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~ 288 (290)
T 2o26_X 242 HRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSA-NVTTTLKVVE 288 (290)
T ss_dssp EEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEE-EEEEEECC--
T ss_pred ccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcE-EEEEEEEEEe
Confidence 124679999999999999999999999876 4566666644
No 192
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.73 E-value=3.1e-16 Score=124.92 Aligned_cols=132 Identities=19% Similarity=0.204 Sum_probs=73.3
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcc---eeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcC
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGD---VAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVP 192 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~---~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~ 192 (286)
...|.|.++..+|+|.|.|.+.+..+. .......|.|...+. ..|.+.-
T Consensus 74 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------~~P~i~~---- 125 (215)
T 3nl4_H 74 TVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQP------------------------KAPSVFP---- 125 (215)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCC------------------------BCCEEEE----
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCc------------------------CCCEEEE----
Confidence 357999999999999999999987542 111234455531100 0011100
Q ss_pred CcccccccccCCCCCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeeecCCCeeeEEE---cccCCCCCeEEEE
Q psy15667 193 PKIESFAFPFDGLPEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSI---NSVSAAHSGEYTC 268 (286)
Q Consensus 193 ~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i---~~v~~~d~G~Y~C 268 (286)
..+...+.+|+.+.|.|.+....| ...+.|+|+|..+.......... ..+++.| ..+...| |.|+|
T Consensus 126 ------~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~---~~g~~~~~s~l~v~~~d-g~ytC 195 (215)
T 3nl4_H 126 ------LAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQ---SSGLYSLSSVVSVTSSS-QPVTC 195 (215)
T ss_dssp ------ECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEC---TTSCEEEEEEEEECC----CCEE
T ss_pred ------ecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceEC---CCCCEEEEEEEEEeccC-CEEEE
Confidence 001123446777777777665433 45677999887553211111111 1223333 5577788 99999
Q ss_pred EEEecccceeeEEEEEE
Q psy15667 269 VASNTAAQARYSSKLQV 285 (286)
Q Consensus 269 ~a~N~~g~~~~~~~L~V 285 (286)
.|.|..|.......|.+
T Consensus 196 ~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 196 NVAHPATNTKVDKTVAP 212 (215)
T ss_dssp EEEEGGGTEEEEEECCS
T ss_pred EEEeCCCCcceEEecCC
Confidence 99999998877776654
No 193
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.73 E-value=9.7e-17 Score=135.34 Aligned_cols=152 Identities=19% Similarity=0.199 Sum_probs=97.6
Q ss_pred cCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcC----CCCcceEEEccCCCCCCeeEEEEEEcCCcc----e
Q psy15667 72 VEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPG----RTSSTSLVINPVGREDRGIYQCIARRSDGD----V 143 (286)
Q Consensus 72 ~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~----~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~----~ 143 (286)
..+.-...|.+... ++.+.|+|+|..+.. ......|.|.++.++|+|.|+|.+.|..+. .
T Consensus 37 ~G~~v~L~C~~~~~------------~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~ 104 (316)
T 3vh8_G 37 RGGHVTLRCHYRHR------------FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSA 104 (316)
T ss_dssp TTSCEEEEEEBTTB------------CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCC
T ss_pred CCCCEEEEEEccCC------------CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceec
Confidence 44555677866542 356899999987643 234578999999999999999999864321 1
Q ss_pred eeeeeEEEEcCC---CceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecC
Q psy15667 144 AQGSAELQLGGL---PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHG 220 (286)
Q Consensus 144 ~~~~~~l~v~~~---~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 220 (286)
.+..+.|.|... |.+...+. ..+.+|+.+.|.|.+ .
T Consensus 105 ~s~~~~l~V~~~~~~p~~~~~~~---------------------------------------~~v~~G~~v~L~C~~--~ 143 (316)
T 3vh8_G 105 PSNPVVIMVTGNHRKPSLLAHPG---------------------------------------PLVKSGERVILQCWS--D 143 (316)
T ss_dssp CCCCEEEEEECSSCCCEEEEESC---------------------------------------SEEETTCCEEEEEEE--S
T ss_pred CCCcEEEEEecCCCCCeEEecCC---------------------------------------CccCCCCeEEEEEcC--C
Confidence 122345555321 11111111 114467777777765 2
Q ss_pred CCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 221 DPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 221 ~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
.+++.+.|+|+|..+.................|.|.++..+|+|.|+|.|.|..|.
T Consensus 144 ~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 144 IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 45568899999887643211111111123568999999999999999999999874
No 194
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.73 E-value=5.6e-16 Score=123.98 Aligned_cols=127 Identities=15% Similarity=0.226 Sum_probs=73.8
Q ss_pred ceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 117 TSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 117 ~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
..|.|.++.++|+|.|.|.+.+..+. .......|.|...+. ..|.|.-.
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~------------------------~~P~v~~~----- 129 (220)
T 2fbj_H 79 LYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESA------------------------RNPTIYPL----- 129 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC------------------------BCCEEEEE-----
T ss_pred EEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCC------------------------CCCEEEEe-----
Confidence 56888999999999999988876432 011224555542110 00111100
Q ss_pred ccccccccCCCCCCCeEEEEEeeecCCCC--CeEEEEeCCeeCCC-CCCceeeecCC--CeeeEEEcccCCCCCeEEEEE
Q psy15667 195 IESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKPLSP-RFPVNVSDLDS--FSSLLSINSVSAAHSGEYTCV 269 (286)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~l~c~~~~~~p~--~~~~W~~~g~~~~~-~~~~~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~ 269 (286)
+...+.+|+.+.|.|.+....|. +.+.|++++..+.. ........... ....|.|.....+|+|.|+|.
T Consensus 130 ------~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~ 203 (220)
T 2fbj_H 130 ------TLPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCS 203 (220)
T ss_dssp ------CCCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEE
T ss_pred ------ecccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEE
Confidence 01124566677777766544354 67888888865410 00000000011 123588999999999999999
Q ss_pred EEeccccee
Q psy15667 270 ASNTAAQAR 278 (286)
Q Consensus 270 a~N~~g~~~ 278 (286)
|.|..|...
T Consensus 204 v~n~~~~~~ 212 (220)
T 2fbj_H 204 VQHDSNPVQ 212 (220)
T ss_dssp EEETTSCCE
T ss_pred EEcCCCceE
Confidence 999998765
No 195
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.72 E-value=1.8e-16 Score=127.31 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=47.0
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+.+|+.+.|.|.+....|.+ .+.|+|++..+.......+...+ .....|.|..+..+| |.|+|.|.|..+.....
T Consensus 140 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 218 (225)
T 1op3_H 140 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 218 (225)
T ss_dssp CCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEEE
T ss_pred ccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccEE
Confidence 45677777777776444554 88888888653211000000101 113468999999889 99999999988765443
No 196
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.72 E-value=1.7e-16 Score=130.91 Aligned_cols=37 Identities=19% Similarity=0.375 Sum_probs=32.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCC-----CCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNP-----TPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p-----~p~v~W~~~ 39 (286)
+.|...+.++.+.+|++++|.|.+.+.| .+.+.|+|+
T Consensus 16 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 57 (268)
T 1x9q_A 16 VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQ 57 (268)
T ss_dssp CCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred ceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEE
Confidence 5567778888999999999999999887 589999985
No 197
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.72 E-value=6.1e-17 Score=138.33 Aligned_cols=148 Identities=17% Similarity=0.159 Sum_probs=98.9
Q ss_pred CeeEEEeeCCccCc----CC---------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCce
Q psy15667 98 PYLIAWFKDGRQIP----GR---------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKV 164 (286)
Q Consensus 98 ~~~~~W~~~g~~l~----~~---------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~ 164 (286)
++.+.|+|++.... .. .....|.|.++..+|+|.|+|.+.|..+.. ...+.|.|...+........
T Consensus 47 ~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~l~V~~~~~~~~~~~~ 125 (349)
T 4dep_C 47 GLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCS-KVAFPLEVVQKDSCFNSPMK 125 (349)
T ss_dssp TCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCTTSCCSCC
T ss_pred CceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecCCceE-EEEEEEEEecCCcccCcccc
Confidence 47899999985321 10 124579999999999999999999987764 34567777554321110000
Q ss_pred EEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEee----ecCCCCCeEEEEeCCeeCCCCCC
Q psy15667 165 TAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGV----THGDPPLTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 165 ~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~----~~~~p~~~~~W~~~g~~~~~~~~ 240 (286)
......+.+|+.+.|.|.+ ..|.|.+.+.|+|+|..+.....
T Consensus 126 ----------------------------------~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~ 171 (349)
T 4dep_C 126 ----------------------------------LPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN 171 (349)
T ss_dssp ----------------------------------CCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS
T ss_pred ----------------------------------cCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc
Confidence 0001124566777777753 14678899999999998854322
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecc-cce---eeEEEEEE
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTA-AQA---RYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~-g~~---~~~~~L~V 285 (286)
+... +..|.|.++..+|+|.|+|.|.|.. |.. ..++.|.|
T Consensus 172 --~~~~---~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v 215 (349)
T 4dep_C 172 --VIPE---GMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKV 215 (349)
T ss_dssp --EEEE---TTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred --eeec---CCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEE
Confidence 2221 2579999999999999999999998 543 45555554
No 198
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.72 E-value=5.5e-17 Score=138.03 Aligned_cols=146 Identities=21% Similarity=0.281 Sum_probs=101.5
Q ss_pred CCeeEEEeeCCccC--cCC------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCcee---cCCceE
Q psy15667 97 GPYLIAWFKDGRQI--PGR------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVR---LIPKVT 165 (286)
Q Consensus 97 ~~~~~~W~~~g~~l--~~~------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~---~~~~~~ 165 (286)
+.+.+.|+|+|..+ ... .....|.|.++..+|+|.|+|.+.|..|.. ...+.|.|...+... ......
T Consensus 53 p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~ 131 (339)
T 3o4o_C 53 PRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQI 131 (339)
T ss_dssp SCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEE
T ss_pred CCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceE-EEEEEEEEEcCCCccccccccceE
Confidence 45689999999874 322 124679999999999999999999988754 456777776554321 111123
Q ss_pred EecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEee----ecCCCCCeEEEEeCCeeCCCCC-C
Q psy15667 166 AIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGV----THGDPPLTIRWLKDGKPLSPRF-P 240 (286)
Q Consensus 166 ~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~----~~~~p~~~~~W~~~g~~~~~~~-~ 240 (286)
+. +|+.+.|.|.+ ..|.|.+.+.|+|+|..+.... +
T Consensus 132 ~~---------------------------------------~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~ 172 (339)
T 3o4o_C 132 LT---------------------------------------LSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEK 172 (339)
T ss_dssp EE---------------------------------------TTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSS
T ss_pred EE---------------------------------------CCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCce
Confidence 33 44555555542 2467788899999999886553 2
Q ss_pred ceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc----ceeeEEEEEE
Q psy15667 241 VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA----QARYSSKLQV 285 (286)
Q Consensus 241 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g----~~~~~~~L~V 285 (286)
+.+. .....|.|.++..+|+|.|+|.|.|..| ....++.|.|
T Consensus 173 ~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V 218 (339)
T 3o4o_C 173 FLSV---RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRI 218 (339)
T ss_dssp EEEC---TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEE
T ss_pred eEEc---CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEE
Confidence 2221 1234799999999999999999999988 4556666665
No 199
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.72 E-value=8.9e-17 Score=133.47 Aligned_cols=140 Identities=17% Similarity=0.279 Sum_probs=103.5
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCe-eEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPD-IGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~-v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|...+....+.+|+++.|.|.+.+.|.+. +.|++ ++..+..+.++... ..+ .|.|.+++.+|+|.|+|.|
T Consensus 92 ~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~----~~~----~L~i~~v~~~d~G~Y~C~a 163 (289)
T 3ejj_X 92 WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFS----PWR----GFIIRKAKVLDSNTYVCKT 163 (289)
T ss_dssp EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEE----TTT----EEEESSCCGGGCEEEEEEE
T ss_pred eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEEC----CCC----CEEEeecccccCEEEEEEE
Confidence 56666777899999999999999877765 99986 67777666665431 122 3889999999999999999
Q ss_pred E-cCCEEE------EEe-----------------------------cCC-CCCeeEEEeeCCccCcCCC----------C
Q psy15667 83 E-NRAGTC------EIT-----------------------------PYD-SGPYLIAWFKDGRQIPGRT----------S 115 (286)
Q Consensus 83 ~-n~~g~~------~~~-----------------------------~~~-~~~~~~~W~~~g~~l~~~~----------~ 115 (286)
. +..+.. .+. ... .+++.+.|+++|..+.... .
T Consensus 164 ~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
T 3ejj_X 164 MVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKK 243 (289)
T ss_dssp EETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEE
T ss_pred EeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEe
Confidence 8 433321 111 001 2346899999998875421 1
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 153 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~ 153 (286)
...|.|.++..+|+|.|+|.|.|..|.. .+++.|.+.
T Consensus 244 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~-~~s~~L~~~ 280 (289)
T 3ejj_X 244 VRALSLNAVDFQDAGIYSCVASNDVGTR-TATMNFQVV 280 (289)
T ss_dssp EEEEEESSCCSSSCEEEEEEEECSSCEE-EEEEEEECC
T ss_pred eEEEEEEeecccCCEEEEEEEEcCCCCc-cccEEEEEE
Confidence 4679999999999999999999999976 346666653
No 200
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.72 E-value=1.5e-16 Score=128.08 Aligned_cols=131 Identities=18% Similarity=0.279 Sum_probs=72.5
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCC----CceecCCceEEecCCCEEEEeeEeeecCCeEEEEEc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGL----PYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKV 191 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~----~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~ 191 (286)
...|.|.++..+|+|.|.|.+.+..+........|.|... |.+....
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~----------------------------- 128 (227)
T 1mju_H 78 TAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA----------------------------- 128 (227)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC-----------------------------
T ss_pred eEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec-----------------------------
Confidence 3568888888889999999888753211112345555431 1111100
Q ss_pred CCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCC-CCceeee-cCCCeeeEEEcccCCCCCeEEEE
Q psy15667 192 PPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR-FPVNVSD-LDSFSSLLSINSVSAAHSGEYTC 268 (286)
Q Consensus 192 ~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~-~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C 268 (286)
+...+.+|+.+.|.|.+....|.+ .+.|+|++..+... ....... .......|.|..+..+| |.|+|
T Consensus 129 ---------~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C 198 (227)
T 1mju_H 129 ---------PVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITC 198 (227)
T ss_dssp ---------CCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEE
T ss_pred ---------CCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEE
Confidence 011133556666666655333444 77888877654210 0000000 00124578999998888 99999
Q ss_pred EEEecccceeeEEEEEE
Q psy15667 269 VASNTAAQARYSSKLQV 285 (286)
Q Consensus 269 ~a~N~~g~~~~~~~L~V 285 (286)
.|.|..+.......+.+
T Consensus 199 ~a~n~~~~~~~~~~~~~ 215 (227)
T 1mju_H 199 NVAHPASSTKVDKKIEP 215 (227)
T ss_dssp EEEEGGGTEEEEEECCC
T ss_pred EEEECCCCcceEEEeCC
Confidence 99999887766666544
No 201
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.72 E-value=1.5e-16 Score=123.47 Aligned_cols=110 Identities=18% Similarity=0.254 Sum_probs=75.5
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKI 195 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~ 195 (286)
...|.|.++..+|+|.|+|.+.+.. .....+.|.|..++ +.|.+..
T Consensus 68 ~~sL~I~~v~~~D~G~Y~C~v~~~~--~~~~~~~L~V~~~~-------------------------~~P~i~~------- 113 (180)
T 2dru_A 68 NGALRIYNVSKEDRGDYYMRMLHET--EDQWKITMEVYEMV-------------------------SKPMIYW------- 113 (180)
T ss_dssp TCCEEECSCCGGGCEEEEEEEESSS--EEEEEEEEEEECCC-------------------------CCCEEEE-------
T ss_pred CccEEEcCCCHHHCeEEEEEEEcCC--eEEEEEEEEEECCC-------------------------CCCEEEe-------
Confidence 4679999999999999999998765 22345666664321 1111111
Q ss_pred cccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 196 ESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 196 ~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.+..+.|.|.+..| |.|.+.|+|++..+.. . ...+|.+.. .+|+|.|+|.|.|.+|
T Consensus 114 -----------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-------~---~~~~l~~~~--~~d~g~Y~C~a~N~~~ 169 (180)
T 2dru_A 114 -----------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS-------L---RQKTMSYQW--TNLRAPFKCKAVNRVS 169 (180)
T ss_dssp -----------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE-------E---SSSEEEEEC--SCCSSCEEEEEEETTE
T ss_pred -----------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC-------C---CCCEEEEEE--hhcCccEEEEEecCcC
Confidence 12347788877556 7899999999987641 1 123555533 7899999999999999
Q ss_pred ceeeEEEE
Q psy15667 276 QARYSSKL 283 (286)
Q Consensus 276 ~~~~~~~L 283 (286)
.....+.+
T Consensus 170 ~~~~~~~i 177 (180)
T 2dru_A 170 QESEMEVV 177 (180)
T ss_dssp EEEEEECC
T ss_pred ccccceeE
Confidence 87766544
No 202
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.72 E-value=7.8e-16 Score=124.95 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=31.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEee
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL 38 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~ 38 (286)
.+.|...+..+++.+|++++|.| ..+.|.+.+.|+|
T Consensus 2 ~~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r 37 (245)
T 4ei6_B 2 GPKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYK 37 (245)
T ss_dssp CCCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEE
T ss_pred CcceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEE
Confidence 35677777788999999999999 6778899999998
No 203
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.71 E-value=2.1e-17 Score=131.00 Aligned_cols=44 Identities=14% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCeeEeccccccc--cCCCcEEEEEEeecCC----CCeeEEeeCCEEcCC
Q psy15667 2 PPILTYSFIEQTL--QPGPAVSLKCIASGNP----TPDIGWTLDGFELPT 45 (286)
Q Consensus 2 ~p~~~~~~~~~~~--~~G~~~~l~C~~~g~p----~p~v~W~~~~~~l~~ 45 (286)
+|.+...+....+ .+|++++|.|.+.|.| .+.|.|+|++.++..
T Consensus 1 ~P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~ 50 (207)
T 1l6x_A 1 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN 50 (207)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECC
T ss_pred CCeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccC
Confidence 3555555555544 8999999999999875 349999999987753
No 204
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.71 E-value=2.4e-17 Score=133.80 Aligned_cols=43 Identities=14% Similarity=0.229 Sum_probs=32.7
Q ss_pred CCeeEecccccc--ccCCCcEEEEEEeecC---CCC-eeEEeeCCEEcC
Q psy15667 2 PPILTYSFIEQT--LQPGPAVSLKCIASGN---PTP-DIGWTLDGFELP 44 (286)
Q Consensus 2 ~p~~~~~~~~~~--~~~G~~~~l~C~~~g~---p~p-~v~W~~~~~~l~ 44 (286)
+|.+...+.... +.+|++++|.|.+.|. |.+ .|.|++++..+.
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~ 63 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVH 63 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEEC
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCcccc
Confidence 455555555554 8899999999999987 776 899999987664
No 205
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.71 E-value=1.9e-15 Score=121.15 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=49.9
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEe-CCeeCCCCCCce-eeecC--CCeeeEEEcccCC--CCCeEEEEEEEecccce
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLK-DGKPLSPRFPVN-VSDLD--SFSSLLSINSVSA--AHSGEYTCVASNTAAQA 277 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~-~g~~~~~~~~~~-~~~~~--~~~~~L~i~~v~~--~d~G~Y~C~a~N~~g~~ 277 (286)
+.+|+.+.|.|.+....|.+ .+.|++ +|..+....... ..... .....|.|..... +|.|.|+|.|.|..|..
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~ 217 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNK 217 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCE
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCC
Confidence 45677777777776544555 888998 887764310000 00000 1134688887776 88999999999999877
Q ss_pred eeEE
Q psy15667 278 RYSS 281 (286)
Q Consensus 278 ~~~~ 281 (286)
....
T Consensus 218 ~~~~ 221 (223)
T 1dee_B 218 EKDV 221 (223)
T ss_dssp EEEE
T ss_pred cccc
Confidence 6554
No 206
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.71 E-value=1e-16 Score=129.33 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=33.7
Q ss_pred CCeeE-eccccccccCCCcEEEEEEeecC-CC-C-eeEEeeCCEEc
Q psy15667 2 PPILT-YSFIEQTLQPGPAVSLKCIASGN-PT-P-DIGWTLDGFEL 43 (286)
Q Consensus 2 ~p~~~-~~~~~~~~~~G~~~~l~C~~~g~-p~-p-~v~W~~~~~~l 43 (286)
+|.+. ..+..+.+.+|++++|.|.+.|. |. | .+.|++||..+
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~ 57 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGN 57 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeec
Confidence 45554 56666788999999999999984 74 5 99999998776
No 207
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.71 E-value=1.1e-15 Score=127.71 Aligned_cols=75 Identities=20% Similarity=0.327 Sum_probs=47.1
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeCC--EEcC-----------------CCCeeEeceEEecccceeEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG--FELP-----------------TNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~--~~l~-----------------~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
.+..+++.+|++++|.|.+.+.| .+.+.|+|+. ..+. ...|+.+... ......+|.
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~---~~~~~~sL~ 104 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSD---KSSSTAYME 104 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEE---GGGTEEEEE
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEe---CCCCEEEEE
Confidence 45677899999999999999877 5889999853 1110 0122221100 001123477
Q ss_pred EcccccCCCeEEEEEEEcC
Q psy15667 67 ISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~ 85 (286)
|.+++.+|+|.|.|.+.|.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~ 123 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAY 123 (291)
T ss_dssp ECSCCGGGCEEEEEEEECG
T ss_pred ECcCCHHHCEEEEEEEecc
Confidence 7777777777777777664
No 208
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.71 E-value=6.4e-18 Score=148.93 Aligned_cols=189 Identities=17% Similarity=0.278 Sum_probs=120.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CCC-eeEEeeCCEEcCCC--CeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PTP-DIGWTLDGFELPTN--NRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p-~v~W~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+.+|+.++|.|.+.|. |.| .|.|++++..+... ..... .+.-.....|.|.++..+| |.
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~~~----~~~~~~~s~L~i~~~~~~d-g~ 193 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQ----SDLYTLSSSVTVPSSPRPS-ET 193 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCEEC----SSCEEEEEEEEEETTTTTS-SC
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCceec----CCcEEEEEEEEEcchhcCC-Cc
Confidence 4555544444556899999999999986 776 99999998753210 00000 0000112358899999999 99
Q ss_pred EEEEEEcCCEE----EE----------------------Eec-------------------CCCC----CeeEEEeeCCc
Q psy15667 78 YACVAENRAGT----CE----------------------ITP-------------------YDSG----PYLIAWFKDGR 108 (286)
Q Consensus 78 Y~C~a~n~~g~----~~----------------------~~~-------------------~~~~----~~~~~W~~~g~ 108 (286)
|+|.|.|..|. .. +.+ .+.. ++.+.|+|+|.
T Consensus 194 Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~ 273 (434)
T 1igy_B 194 VTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNV 273 (434)
T ss_dssp CEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSC
T ss_pred EEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCc
Confidence 99999987653 11 101 0111 23799999998
Q ss_pred cCcCC-------------CCcceEEEccCCCCCCeeEEEEEEcCCcceee-eeeEE--EEcCCCceecCC-ceEEecCCC
Q psy15667 109 QIPGR-------------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQ-GSAEL--QLGGLPYVRLIP-KVTAIDGEG 171 (286)
Q Consensus 109 ~l~~~-------------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~-~~~~l--~v~~~~~~~~~~-~~~~~~g~~ 171 (286)
.+... .....|.|.++..+|+|.|+|.|.|..+.... ..+.+ .+..+|.+...+ ......|..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~ 353 (434)
T 1igy_B 274 EVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDK 353 (434)
T ss_dssp CBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSE
T ss_pred ccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCc
Confidence 76421 01346999999999999999999998775311 12222 233345443322 122345778
Q ss_pred EEEEeeEeeecCC--eEEEEEcCCcc
Q psy15667 172 LSIKCPVAGYPIE--EVHWEKVPPKI 195 (286)
Q Consensus 172 ~~l~c~~~~~p~~--~v~w~~~~~~~ 195 (286)
+.|.|.+.|.+++ .|.|.+....+
T Consensus 354 ~~L~C~~~g~~P~~~~v~W~k~g~~l 379 (434)
T 1igy_B 354 VSLTCMITDFFPEDITVEWQSDGQAP 379 (434)
T ss_dssp EEEEEEEEEEBCSCEEEEEEETTSCC
T ss_pred EEEEEEEEeeECCCeEEEEEECCEec
Confidence 9999999996443 79999976544
No 209
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.71 E-value=1e-15 Score=124.34 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=30.7
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
+...+..+.+.+|++++|.|.+.+.|.+.+.|+|.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQ 38 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEE
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEE
Confidence 45566778899999999999999999999999983
No 210
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.70 E-value=6.7e-17 Score=111.29 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=72.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+||.|...+.++.+.+|++++|.|.+.+ |.|.+.|+|||.+|..+.++.+.. .+. ...|.|.+++.+|+|.|+|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~----~g~-~~~L~I~~v~~~D~G~Y~C 77 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIE----DGK-KHILILHNCQLGMTGEVSF 77 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEE----ETT-EEEEEECSCCGGGCEEEEE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEE----ECC-EEEEEECCCChhhCEEEEE
Confidence 4899999999999999999999999986 457899999999998877775532 222 3469999999999999999
Q ss_pred EEEcCCEEEEEe
Q psy15667 81 VAENRAGTCEIT 92 (286)
Q Consensus 81 ~a~n~~g~~~~~ 92 (286)
.|.|..+.+.+.
T Consensus 78 ~a~n~~~sa~L~ 89 (93)
T 1waa_A 78 QAANTKSAANLK 89 (93)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCCcEEEEEE
Confidence 999987666554
No 211
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.70 E-value=3.1e-16 Score=126.14 Aligned_cols=77 Identities=19% Similarity=0.246 Sum_probs=44.7
Q ss_pred CCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 206 PEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
.+|+.+.|.|.+....|.+ .+.|+|++..+.......+.... .....|.|..+..+| |.|+|.|.|..|.......
T Consensus 143 ~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 143 TTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp -CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEE
Confidence 3555666666554333444 77777776543110000000000 114568899888866 9999999999998765544
Q ss_pred E
Q psy15667 283 L 283 (286)
Q Consensus 283 L 283 (286)
+
T Consensus 222 ~ 222 (228)
T 3bae_H 222 I 222 (228)
T ss_dssp C
T ss_pred c
Confidence 3
No 212
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.70 E-value=1.6e-16 Score=128.64 Aligned_cols=200 Identities=14% Similarity=0.172 Sum_probs=106.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
+.+...+..+.+.+|++++|.|.+.+ |.+.+.|+|... .....+... .. +...+.-
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~--~~~~~~~~~--------------~~-----~~~~~~~-- 58 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTL--GKELKFLIQ--------------HY-----EKVERDK-- 58 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECT--TSCCEEEEE--------------EE-----TTEEEEE--
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECC--CCCCEEEEE--------------Ec-----CCccccC--
Confidence 45666777789999999999999876 788999998421 011111110 00 1111110
Q ss_pred EcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCc--ceeeeeeEEEEcCCCceec
Q psy15667 83 ENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG--DVAQGSAELQLGGLPYVRL 160 (286)
Q Consensus 83 ~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g--~~~~~~~~l~v~~~~~~~~ 160 (286)
....++ +.-.+++ .....|.|.++..+|+|.|+|.+.+..+ ........|.|........
T Consensus 59 ~~~~~r------------~~~~~~~------~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~ 120 (240)
T 3q5y_A 59 GFLPSR------------FSVQQFD------DYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVT 120 (240)
T ss_dssp CSCCTT------------EEEEECT------TSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCB
T ss_pred cccCCe------------EEEEeCC------CCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCC
Confidence 000000 1111111 1235788888888899999998873211 1111223444432100000
Q ss_pred CCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCC
Q psy15667 161 IPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRF 239 (286)
Q Consensus 161 ~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~ 239 (286)
.+...+. .+ ....+.+|+.+.|.|.+....|.+ .+.|+|+|..+....
T Consensus 121 ~p~~~~~-----------------------~~--------~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~ 169 (240)
T 3q5y_A 121 PPKVSLF-----------------------EP--------SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGV 169 (240)
T ss_dssp CCEEEEE-----------------------CC--------CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CCeeEEe-----------------------CC--------chhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcE
Confidence 0100000 00 011133466777777765545544 788999998875432
Q ss_pred Cce---eeecCC---CeeeEEEcccCCCC-CeEEEEEEEeccc
Q psy15667 240 PVN---VSDLDS---FSSLLSINSVSAAH-SGEYTCVASNTAA 275 (286)
Q Consensus 240 ~~~---~~~~~~---~~~~L~i~~v~~~d-~G~Y~C~a~N~~g 275 (286)
... ....+. ....|.|..+..+| .|.|+|.|.|...
T Consensus 170 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 170 STDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred ecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 111 011111 12358899999999 7799999999864
No 213
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.70 E-value=2.3e-16 Score=133.59 Aligned_cols=135 Identities=15% Similarity=0.218 Sum_probs=85.6
Q ss_pred cccccccCCCcEEEEEEeecCCCC--eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeEEEEEEEc
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPTP--DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~p--~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
..+..+.+|+.++|.|.+.|.|++ .+.|++||..|.......... ...+. ....|.|.....+|.|.|+|.|.|
T Consensus 124 ~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~--~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n 201 (327)
T 2wng_A 124 GPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPV--GESVSYSIHSTAKVVLTREDVHSQVICEVAH 201 (327)
T ss_dssp CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECS--SCCSCEEEEEEEEEECCTTGGGCEEEEEEEC
T ss_pred ccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccc--cCCCceEEEEEEEEechhcCcCceEEEEEec
Confidence 345678999999999999998766 899999999987543221100 00111 122477877777778999999998
Q ss_pred CCEE-------EEEe------c---------------------CCCCCe--eEEEeeCCccCcCC-------CC------
Q psy15667 85 RAGT-------CEIT------P---------------------YDSGPY--LIAWFKDGRQIPGR-------TS------ 115 (286)
Q Consensus 85 ~~g~-------~~~~------~---------------------~~~~~~--~~~W~~~g~~l~~~-------~~------ 115 (286)
..+. ..+. | .+..|+ .+.|+|||+.+... ..
T Consensus 202 ~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~ 281 (327)
T 2wng_A 202 VTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNW 281 (327)
T ss_dssp TTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEE
T ss_pred cccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEE
Confidence 6542 1110 0 001122 79999999987421 11
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceee
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQ 145 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~ 145 (286)
...|.|.++..+|+|.|+|.|.|..+....
T Consensus 282 ~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 282 MSWLLVNVSAHRDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp EEEEEC-------CCEEEEEEEETTCCCEE
T ss_pred EEEEEEccccccCCCEEEEEEEeCCCCCch
Confidence 135888999999999999999999886543
No 214
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.69 E-value=3.8e-15 Score=119.07 Aligned_cols=128 Identities=16% Similarity=0.190 Sum_probs=72.7
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCc-ceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCc
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDG-DVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPK 194 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g-~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~ 194 (286)
...|.|.++..+|+|.|.|.+.+... ........|.|...+. ..|.+.-.
T Consensus 80 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~------------------------~~p~v~~~----- 130 (221)
T 3m8o_H 80 TAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASP------------------------TSPKVFPL----- 130 (221)
T ss_dssp EEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCC------------------------BCCEEEEE-----
T ss_pred EEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCC------------------------CCCeEEEe-----
Confidence 34689999999999999999987631 1112234555531110 00011000
Q ss_pred ccccccccCCCCCCCeEEEEEeeecCCCC--CeEEEEeCCeeCCCCCCceee--ecC--CCeeeEEEcccCCCCCeEEEE
Q psy15667 195 IESFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKPLSPRFPVNVS--DLD--SFSSLLSINSVSAAHSGEYTC 268 (286)
Q Consensus 195 ~~~~~~~~~~~~~g~~~~l~c~~~~~~p~--~~~~W~~~g~~~~~~~~~~~~--~~~--~~~~~L~i~~v~~~d~G~Y~C 268 (286)
.+... .+|+.+.|.|.+....|. +.+.|+|+|..+......... ... .....|.|..+..+|+|.|+|
T Consensus 131 -----~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC 204 (221)
T 3m8o_H 131 -----SLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTC 204 (221)
T ss_dssp -----ECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEE
T ss_pred -----cCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEE
Confidence 00111 456667777766543444 478888888765211000000 000 013468999999999999999
Q ss_pred EEEeccccee
Q psy15667 269 VASNTAAQAR 278 (286)
Q Consensus 269 ~a~N~~g~~~ 278 (286)
.|.|..+...
T Consensus 205 ~v~~~~~~~~ 214 (221)
T 3m8o_H 205 HVKHYTNPSQ 214 (221)
T ss_dssp EEEETTSCCE
T ss_pred EEEECCCCce
Confidence 9999987543
No 215
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.69 E-value=2.4e-16 Score=133.48 Aligned_cols=142 Identities=17% Similarity=0.309 Sum_probs=99.4
Q ss_pred ccccccccCC---CcEEEEEE-eecCCCCeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeEEEEE
Q psy15667 8 SFIEQTLQPG---PAVSLKCI-ASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 8 ~~~~~~~~~G---~~~~l~C~-~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
......+.+| +.++|.|. +.+.|.|.+.|++++.......... ...+. ....|.|..+..+|+|.|+|.
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 212 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIR-----NPNGTVTVISRYRLVPSREAHQQSLACI 212 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEE-----CTTSCEEEEEEEEECCCGGGTTCEEEEE
T ss_pred CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeE-----CCCCcEEEEEEEEEEeccccCCCEEEEE
Confidence 4455677888 78999997 8899999999999632211000000 01111 123588999999999999999
Q ss_pred EEcCCEEEEEe--------------cC------------------CCCCee-EEEeeCCccCcCC--CCcceEEEc-cCC
Q psy15667 82 AENRAGTCEIT--------------PY------------------DSGPYL-IAWFKDGRQIPGR--TSSTSLVIN-PVG 125 (286)
Q Consensus 82 a~n~~g~~~~~--------------~~------------------~~~~~~-~~W~~~g~~l~~~--~~~~~l~i~-~v~ 125 (286)
|.|..|..... +. ..+++. +.|++++..+... .....|.|. ++.
T Consensus 213 a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~L~i~~~v~ 292 (331)
T 3u83_A 213 VNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPIN 292 (331)
T ss_dssp EEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECSCCC
T ss_pred EecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccceecCcEEEEeCCCc
Confidence 99987753211 00 112345 9999999987643 235689999 999
Q ss_pred CCCCeeEEEEEEcCCcceeeeeeEEEEcCC
Q psy15667 126 REDRGIYQCIARRSDGDVAQGSAELQLGGL 155 (286)
Q Consensus 126 ~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~ 155 (286)
.+|+|.|+|.|.|..|.. ...+.|.|...
T Consensus 293 ~~d~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 321 (331)
T 3u83_A 293 YSLAGTYICEATNPIGTR-SGQVEVNITEA 321 (331)
T ss_dssp GGGCEEEEEEEEETTEEE-EEEEEECCBC-
T ss_pred cccCeEEEEEEEeccccc-eEEEEEEEecc
Confidence 999999999999999976 45677777544
No 216
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.69 E-value=5.3e-16 Score=127.79 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=28.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD 39 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~ 39 (286)
+.+...+..+.+.+|++++|.|.+. .|.+.+.|+|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~ 62 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQ 62 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEE
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEE
Confidence 3445556667899999999999886 67889999983
No 217
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.69 E-value=2.6e-15 Score=124.50 Aligned_cols=38 Identities=11% Similarity=0.148 Sum_probs=32.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG 40 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~ 40 (286)
+.|...+..+++.+|++++|.|.+.+.|.+.+.|+|++
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 62 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQF 62 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEEC
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeC
Confidence 45666677889999999999999988888999999864
No 218
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.68 E-value=5.2e-15 Score=119.35 Aligned_cols=79 Identities=15% Similarity=0.152 Sum_probs=47.5
Q ss_pred CC-CeEEEEEeeecCCCCC-eEEEEe-CCeeCCCCCCc-eeeecC--CCeeeEEEcccCC--CCCeEEEEEEEeccccee
Q psy15667 207 EG-ARTRVICGVTHGDPPL-TIRWLK-DGKPLSPRFPV-NVSDLD--SFSSLLSINSVSA--AHSGEYTCVASNTAAQAR 278 (286)
Q Consensus 207 ~g-~~~~l~c~~~~~~p~~-~~~W~~-~g~~~~~~~~~-~~~~~~--~~~~~L~i~~v~~--~d~G~Y~C~a~N~~g~~~ 278 (286)
+| +.+.|.|.+....|.+ .+.|++ +|..+...... ...... .....|.|..... +|.|.|+|.|.|..|...
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~ 218 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKE 218 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEE
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcc
Confidence 45 5566666655443544 788888 77765430000 000000 1135688988887 899999999999999877
Q ss_pred eEEEEEE
Q psy15667 279 YSSKLQV 285 (286)
Q Consensus 279 ~~~~L~V 285 (286)
....+.|
T Consensus 219 ~~~~i~~ 225 (232)
T 1dn0_B 219 KNVPLPV 225 (232)
T ss_dssp EEEECCC
T ss_pred eeEecCC
Confidence 7666554
No 219
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.68 E-value=8e-17 Score=110.32 Aligned_cols=85 Identities=21% Similarity=0.367 Sum_probs=67.1
Q ss_pred CCeeEeccccc--cccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQ--TLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~--~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|.....+. .+.+|+.++|.|.+.+ |.|.|+|+|||++|..+.++.+.. .+. ...|.|.+++.+|+|.|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~----~~~-~~~L~I~~v~~~D~G~Y~ 77 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLEN----EGP-HRRLVLPATQPSDGGEFQ 77 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEE----ETT-EEEEEESSCCGGGCSEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEe----cCC-eEEEEeCCCChhhcEEEE
Confidence 56665444444 3468999999999865 888999999999998888876532 222 346999999999999999
Q ss_pred EEEEcCCEEEEEe
Q psy15667 80 CVAENRAGTCEIT 92 (286)
Q Consensus 80 C~a~n~~g~~~~~ 92 (286)
|.|.|..+.+.++
T Consensus 78 C~a~n~~~~~~lt 90 (91)
T 2lvc_A 78 CVAGDECAYFTVT 90 (91)
T ss_dssp EECSSCEEEEEEE
T ss_pred EEEcceEEEEEEE
Confidence 9999988877654
No 220
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=3.2e-16 Score=109.01 Aligned_cols=86 Identities=23% Similarity=0.336 Sum_probs=72.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++||..+..+.++.+.. ..+....|.|.+++.+|+|.|+|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYW----PEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE----EETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEE----cCCCEEEEEECCCCcCCCEEEEEE
Confidence 7899999999999999999999999999999999999999998766654311 112234699999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 81 a~N~~g~~~~ 90 (99)
T 1g1c_A 81 AINIAGETSS 90 (99)
T ss_dssp EEETTEEEEE
T ss_pred EEECCCcEEE
Confidence 9999987653
No 221
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.67 E-value=3.4e-16 Score=142.81 Aligned_cols=179 Identities=22% Similarity=0.405 Sum_probs=107.4
Q ss_pred cccccCCCcEEEEEEe-ecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe-EEEEEEEcCCEE
Q psy15667 11 EQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG-EYACVAENRAGT 88 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G-~Y~C~a~n~~g~ 88 (286)
+..+.+|++++|.|.+ .+.|.+.+.|+|++..+... + . +.. ..| .|
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~-~------------------~--~~~-~~~~~~---------- 422 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAW-K------------------V--LSP-QGGGPW---------- 422 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSC-E------------------E--CCS-CCSSGG----------
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEE-E------------------e--ccc-CCCCCc----------
Confidence 3467899999999998 78999999999986532111 0 0 000 000 00
Q ss_pred EEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEec
Q psy15667 89 CEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAID 168 (286)
Q Consensus 89 ~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~ 168 (286)
.+...+ .....|.|.++..+|+|.|+|.+.|..+......+.|.|...|....
T Consensus 423 ----------------~~r~~~---~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~-------- 475 (581)
T 3o3u_N 423 ----------------DSVARV---LPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPE-------- 475 (581)
T ss_dssp ----------------GGTSEE---CTTSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCE--------
T ss_pred ----------------CCcEEE---cCCceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCE--------
Confidence 000000 11236889999999999999999988876544567777754332100
Q ss_pred CCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCe-EEEEEeeecCCCCCeEEEEeCCeeCCCCC-Cceeee-
Q psy15667 169 GEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGAR-TRVICGVTHGDPPLTIRWLKDGKPLSPRF-PVNVSD- 245 (286)
Q Consensus 169 g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~-~~l~c~~~~~~p~~~~~W~~~g~~~~~~~-~~~~~~- 245 (286)
+. . ....+.+|.. ..|.|.+..+.|.+.+.|+|+|..+.... ...+..
T Consensus 476 -----------------i~---------~---~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~ 526 (581)
T 3o3u_N 476 -----------------IV---------D---SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQ 526 (581)
T ss_dssp -----------------EE---------S---CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEE
T ss_pred -----------------EE---------c---CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEee
Confidence 00 0 0011223333 34567665556778888888888876432 222211
Q ss_pred --c--C----CCeeeEEEcccCCCC-CeEEEEEEEecccce
Q psy15667 246 --L--D----SFSSLLSINSVSAAH-SGEYTCVASNTAAQA 277 (286)
Q Consensus 246 --~--~----~~~~~L~i~~v~~~d-~G~Y~C~a~N~~g~~ 277 (286)
. . ....+|.|..++.+| .|.|+|.|.|.++..
T Consensus 527 ~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 527 TRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred eEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 0 0 124579999998555 899999999997543
No 222
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=109.37 Aligned_cols=85 Identities=19% Similarity=0.353 Sum_probs=73.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|+++.|.|.+.|.|.|.+.|+||+..+..+.++.+.. .+ ....|.|.++..+|+|.|+|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~-~~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTN----TS-GVLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE----ET-TEEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEE----CC-CEEEEEEcCCCcccCEEEEEE
Confidence 7899999999999999999999999999999999999999998777765421 12 224699999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 83 a~N~~G~~~~ 92 (103)
T 3qp3_A 83 CTNYKGEASD 92 (103)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCCcEEE
Confidence 9999987653
No 223
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=4.4e-16 Score=111.36 Aligned_cols=85 Identities=18% Similarity=0.242 Sum_probs=72.8
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.|+|.|.+.|+||+..+..+.++.+.. ......|.|.+++.+|+|.|+|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C 80 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVEN-----SENGSKLTILAARQEHCGCYTL 80 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEE-----CSSEEEEEETTCCTTTCEEEEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEE-----cCCEEEEEECCCChhcCEEEEE
Confidence 38999999999999999999999999999999999999999998777765431 1123469999999999999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 81 ~a~N~~g~~~ 90 (114)
T 2cqv_A 81 LVENKLGSRQ 90 (114)
T ss_dssp EEECSSCEEE
T ss_pred EEEECCCcEE
Confidence 9999988654
No 224
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=5.8e-15 Score=119.80 Aligned_cols=212 Identities=16% Similarity=0.160 Sum_probs=110.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
+.+...+..+.+.+|++++|.|.+.+. +.+.+.|+|+... ....+.+ .... .+....
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~--~~~~~~~--------------~~~~-----~~~~~~ 60 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPG--EVIQFLV--------------SISY-----DGTVRK 60 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTT--SCCEEEE--------------EECS-----SSCEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCC--CCcEEEE--------------EEec-----CCceec
Confidence 456667778899999999999999885 6789999985311 0011110 0000 000000
Q ss_pred EEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCc-c-----eeeeeeEEEEcC
Q psy15667 81 VAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG-D-----VAQGSAELQLGG 154 (286)
Q Consensus 81 ~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g-~-----~~~~~~~l~v~~ 154 (286)
. . .... ..+...++. ......|.|.++..+|+|.|.|.+.+... . .......|.|..
T Consensus 61 ~--~--------~~~~--~R~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (242)
T 1hxm_B 61 E--S--------GIPS--GKFEVDRIP-----ETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITD 123 (242)
T ss_dssp C--T--------TCCT--TSEEEEEET-----TTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEES
T ss_pred C--C--------cccC--CeEEEEecC-----CCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcc
Confidence 0 0 0000 001111110 01235788999999999999998887531 1 011123455533
Q ss_pred CCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCe
Q psy15667 155 LPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGK 233 (286)
Q Consensus 155 ~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~ 233 (286)
.+..... .|.+.+ . ......+.+|+.+.|.|.+....|. +.+.|+|++.
T Consensus 124 ~~~~~~~-------------------~p~~~v---------~--~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 173 (242)
T 1hxm_B 124 KQLDADV-------------------SPKPTI---------F--LPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKS 173 (242)
T ss_dssp SCCCSCC-------------------SCBCCC---------C--CCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSS
T ss_pred cccCCCc-------------------CCCceE---------E--CCChhhcccCCCceEEEEEeeEECCCeEEEEEcCCC
Confidence 2100000 000000 0 0001224457777777776644453 6888998886
Q ss_pred -eCCCCCCceeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 234 -PLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 234 -~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
.+...........+ .....|.|..+.. | |.|+|.|.|..+.......|.
T Consensus 174 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~ 226 (242)
T 1hxm_B 174 NTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEII 226 (242)
T ss_dssp CCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEE
T ss_pred EeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEee
Confidence 45322100001111 1134688887765 5 999999999998776655554
No 225
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.67 E-value=1.6e-15 Score=124.72 Aligned_cols=76 Identities=18% Similarity=0.205 Sum_probs=45.1
Q ss_pred CCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 205 LPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
+.+|+.+.|.|.+....|.+ .+.|+|++..+.......+.... .....|.|..+..+| |.|+|.|.|.........
T Consensus 141 v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~ 219 (261)
T 2xqy_G 141 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 219 (261)
T ss_dssp --CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred ccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEE
Confidence 34566666777665433444 78888887654211000000000 113578999988888 999999999877654443
No 226
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.66 E-value=1.4e-15 Score=125.37 Aligned_cols=70 Identities=14% Similarity=0.261 Sum_probs=44.2
Q ss_pred CCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCcee---e-----ecC--CCeeeEEEcccCCCC-CeEEEEEEEecc
Q psy15667 207 EGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNV---S-----DLD--SFSSLLSINSVSAAH-SGEYTCVASNTA 274 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~---~-----~~~--~~~~~L~i~~v~~~d-~G~Y~C~a~N~~ 274 (286)
+|+.+.|.|.+....|.+ .+.|+|+|..+........ . ... .....|.|.....+| .|.|+|.|.|..
T Consensus 163 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~ 242 (270)
T 3qib_D 163 HTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 242 (270)
T ss_dssp HHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECC
T ss_pred cCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecC
Confidence 466666777665434544 7889999887754321100 0 000 112457888888888 999999999986
Q ss_pred cc
Q psy15667 275 AQ 276 (286)
Q Consensus 275 g~ 276 (286)
..
T Consensus 243 l~ 244 (270)
T 3qib_D 243 LS 244 (270)
T ss_dssp BC
T ss_pred CC
Confidence 53
No 227
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.66 E-value=8.5e-16 Score=136.19 Aligned_cols=188 Identities=16% Similarity=0.315 Sum_probs=114.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CC-CeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PT-PDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~-p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
+|.+........+.+|+.++|.|.+.|. |. +.|.|++++..+... .+. ......+. ....|.|.++..+| |.
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~-~~~--~~~~~~~~~~~~s~L~i~~~~~~d-G~ 207 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVH-TFP--AVLQSSGLYSLSSVVTVPSSSLGT-QT 207 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEE-EEE--EEECTTSCEEEEEEEEECSGGGGT-SC
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccce-EcC--ceECCCCCEEEEEEEEecccccCC-ce
Confidence 4555555555567899999999999987 65 899999999765311 110 00011111 12358999999999 99
Q ss_pred EEEEEEcCCEEE-----------------------------E--E-ec------------------CCCCCe----eEEE
Q psy15667 78 YACVAENRAGTC-----------------------------E--I-TP------------------YDSGPY----LIAW 103 (286)
Q Consensus 78 Y~C~a~n~~g~~-----------------------------~--~-~~------------------~~~~~~----~~~W 103 (286)
|+|.|.|..+.. . + .+ .+.+|. .++|
T Consensus 208 Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W 287 (457)
T 1hzh_H 208 YICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNW 287 (457)
T ss_dssp CEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEE
T ss_pred EEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEE
Confidence 999999865421 0 0 00 011222 8999
Q ss_pred eeCCccCcCC-------CCcceEEEcc---CCCCC---CeeEEEEEEcCCcceeeeeeEEE----EcCCCceecCC-c-e
Q psy15667 104 FKDGRQIPGR-------TSSTSLVINP---VGRED---RGIYQCIARRSDGDVAQGSAELQ----LGGLPYVRLIP-K-V 164 (286)
Q Consensus 104 ~~~g~~l~~~-------~~~~~l~i~~---v~~~d---~G~Y~C~a~~~~g~~~~~~~~l~----v~~~~~~~~~~-~-~ 164 (286)
+|||..+... ...+.+.+.. +..+| +|.|+|.|.|..+.. .....+. +...|.+...+ . .
T Consensus 288 ~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~P~v~~~~~~~~ 366 (457)
T 1hzh_H 288 YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA-PIEKTISKAKGQPREPQVYTLPPSRD 366 (457)
T ss_dssp EETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSS-CEEEEECCCCCCCBCCEEEEECCCGG
T ss_pred EeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCC-cceEEEEcccCCCCCCeEEEECCCcc
Confidence 9999876432 1223344432 33555 999999999875543 1222232 23345443322 1 1
Q ss_pred EEecCCCEEEEeeEeeecCC--eEEEEEcCCcc
Q psy15667 165 TAIDGEGLSIKCPVAGYPIE--EVHWEKVPPKI 195 (286)
Q Consensus 165 ~~~~g~~~~l~c~~~~~p~~--~v~w~~~~~~~ 195 (286)
.+..|+ +.|.|.+.|.|++ .+.|.+.+..+
T Consensus 367 ~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l 398 (457)
T 1hzh_H 367 ELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPE 398 (457)
T ss_dssp GGGSSE-EEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred ccCCCc-EEEEEEEEeEECCCCEEEEEECCEEC
Confidence 223455 9999999997554 89999965433
No 228
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.66 E-value=6.1e-16 Score=128.58 Aligned_cols=140 Identities=13% Similarity=0.190 Sum_probs=99.9
Q ss_pred eEeccccccccCCCcEEEEEEeecCCC--CeeEEeeC-CEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPT--PDIGWTLD-GFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~--p~v~W~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+...+.+..+.+|+.++|.|.+.+ |. +.+.|+++ +..+..+.++... ..+ .|.|.+++.+|+|.|+|.
T Consensus 92 ~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~----~~~----~L~i~~~~~~d~G~Y~C~ 162 (292)
T 4dkd_C 92 WNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFS----PWH----GFTIHRAKFIQSQDYQCS 162 (292)
T ss_dssp EEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECC----SSS----CCEETTCCGGGCSEEEEE
T ss_pred ccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccccc----CCc----eEEECCCCHHHCeEEEEE
Confidence 456667778999999999999997 54 78999997 5566555554321 112 278999999999999999
Q ss_pred EEcCCEEE-----E--Eec-----------------------------CC-CCCeeEEEeeCCccCcCCC----------
Q psy15667 82 AENRAGTC-----E--ITP-----------------------------YD-SGPYLIAWFKDGRQIPGRT---------- 114 (286)
Q Consensus 82 a~n~~g~~-----~--~~~-----------------------------~~-~~~~~~~W~~~g~~l~~~~---------- 114 (286)
|.|..+.. . +.. .. ..+..+.|++++..+....
T Consensus 163 a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 242 (292)
T 4dkd_C 163 ALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQ 242 (292)
T ss_dssp ECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEE
T ss_pred EEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceee
Confidence 99865521 1 110 00 1124688999988764321
Q ss_pred CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC
Q psy15667 115 SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 154 (286)
Q Consensus 115 ~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~ 154 (286)
....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..
T Consensus 243 ~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~-~~~~~l~V~~ 281 (292)
T 4dkd_C 243 KVLTLNLDQVDFQHAGNYSCVASNVQGKH-STSMFFRVVE 281 (292)
T ss_dssp EEEEEEESSCCTTSCEEEEEEEECSSCEE-EEEEEECC--
T ss_pred eEEEEEECccChhcCeEEEEEEecCCCCc-eeEEEEEEee
Confidence 12479999999999999999999999875 4566777643
No 229
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.66 E-value=3e-16 Score=105.71 Aligned_cols=78 Identities=24% Similarity=0.411 Sum_probs=65.3
Q ss_pred cccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEE
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGT 88 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~ 88 (286)
+.++.+.+|++++|.|.+.+ |.|.|.|+|||.+|..+.++.+.. .+ ....|.|.+++.+|+|.|+|.|.|..+.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 76 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQ----AG-ARQVLRVQGARSGDAGEYLCDAPQDSRI 76 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEE----CS-SCEEEEESSCSSTTCEEEEEECTTTCEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEee----cC-CeEEEEecCCCCcccEEEEEEECCEEEE
Confidence 45678999999999999866 889999999999998888776532 22 2346999999999999999999998888
Q ss_pred EEEe
Q psy15667 89 CEIT 92 (286)
Q Consensus 89 ~~~~ 92 (286)
+.+.
T Consensus 77 a~l~ 80 (84)
T 2lu7_A 77 FLVS 80 (84)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 230
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.66 E-value=4.4e-15 Score=121.37 Aligned_cols=129 Identities=17% Similarity=0.204 Sum_probs=71.8
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcc---eeeeeeEEEEcC----CCceec-CCceEEecCCCEEEEeeEeeecCCeEE
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGD---VAQGSAELQLGG----LPYVRL-IPKVTAIDGEGLSIKCPVAGYPIEEVH 187 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~---~~~~~~~l~v~~----~~~~~~-~~~~~~~~g~~~~l~c~~~~~p~~~v~ 187 (286)
...|.|.++..+|+|.|.|.+.+.... .......|.|.. .|.+.. .+...
T Consensus 78 ~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~---------------------- 135 (253)
T 3liz_H 78 TLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSA---------------------- 135 (253)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC-------------------------
T ss_pred EEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcc----------------------
Confidence 346889999999999999988775210 111224555531 122211 11111
Q ss_pred EEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCCCCceeeecC--CCeeeEEEcccCCCCCe
Q psy15667 188 WEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPRFPVNVSDLD--SFSSLLSINSVSAAHSG 264 (286)
Q Consensus 188 w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G 264 (286)
+..|+.+.|.|.+....|.+ .+.|++++..+............ ...+.|.|.....+| |
T Consensus 136 -----------------~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g 197 (253)
T 3liz_H 136 -----------------AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-E 197 (253)
T ss_dssp --------------------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-S
T ss_pred -----------------cCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-c
Confidence 23455555556554434444 67787777633110000000000 113578999999999 9
Q ss_pred EEEEEEEecccceeeEEEEE
Q psy15667 265 EYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 265 ~Y~C~a~N~~g~~~~~~~L~ 284 (286)
.|+|.|.|..+.......|.
T Consensus 198 ~ytC~v~~~~~~~~~~~~~~ 217 (253)
T 3liz_H 198 TVTCNVAHPASSTKVDKKIV 217 (253)
T ss_dssp CCEEEEEEGGGTEEEEEECC
T ss_pred eEEEEEEECCCCcceEEEec
Confidence 99999999999877766654
No 231
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.66 E-value=4.2e-16 Score=107.22 Aligned_cols=83 Identities=18% Similarity=0.258 Sum_probs=69.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|++++ ..+..+.++.. .. ....|.|.++..+|+|.|+
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~------~~-~~~~L~i~~~~~~D~G~Y~ 74 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDA------KS-STTSIFFPSAKRADSGNYK 74 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEE------ET-TEEEEECTTBCGGGCEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEe------cC-CEEEEEECCCChhcCEEEE
Confidence 799988888889999999999999999999999999999 88865533321 11 1246999999999999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.|..|....
T Consensus 75 C~a~N~~G~~~~ 86 (93)
T 1wit_A 75 LKVKNELGEDEA 86 (93)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEcCCCeEEE
Confidence 999999997653
No 232
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.65 E-value=5.4e-16 Score=109.60 Aligned_cols=80 Identities=25% Similarity=0.429 Sum_probs=62.6
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.|.+.|+|+|..+..+.++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 25 v~~G~~~~l~C~~~-G~P~p~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 102 (107)
T 3knb_B 25 VVSGAEAELKCVVL-GEPPPVVVWEKGGQQLAASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102 (107)
T ss_dssp EETTSCEEEEEEEE-EESCCEEEEEETTEECCCCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEE-EecCCEEEEEECcccccceeeEEEeec-CceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEE
Confidence 34455555555543 566778889999999987776665543 2356899999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|.
T Consensus 103 V~ 104 (107)
T 3knb_B 103 VL 104 (107)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 233
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.65 E-value=5e-16 Score=108.44 Aligned_cols=80 Identities=20% Similarity=0.385 Sum_probs=62.5
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCC--ceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFP--VNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
+.+|+.+.|.|.+. |.|.|.+.|+|+|+.+..... +.+.. .....+|.|.++..+|+|.|+|.|.|..|..+.++.
T Consensus 17 v~~G~~~~l~C~~~-g~P~p~v~W~k~g~~i~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 94 (100)
T 3knb_A 17 IDEGKVLTVACAFT-GEPTPEVTWSCGGRKIHSQEQGRFHIEN-TDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVN 94 (100)
T ss_dssp EETTSEEEEEEEEE-EESCCEEEEEETTEECCTTGGGTEEEEE-CSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EeCCCeEEEEEEEE-EecCCEEEEEECceEeeeeccceeeeec-ccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEE
Confidence 45666666666654 567788899999998865543 33333 233568999999999999999999999999999999
Q ss_pred EEEC
Q psy15667 283 LQVK 286 (286)
Q Consensus 283 L~V~ 286 (286)
|.|+
T Consensus 95 l~V~ 98 (100)
T 3knb_A 95 IHIR 98 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 234
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.65 E-value=3.1e-15 Score=133.31 Aligned_cols=176 Identities=17% Similarity=0.262 Sum_probs=110.9
Q ss_pred cCCCcEEEEEEeecC-CC-C-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeEEEEEEEcCCEE-
Q psy15667 15 QPGPAVSLKCIASGN-PT-P-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGEYACVAENRAGT- 88 (286)
Q Consensus 15 ~~G~~~~l~C~~~g~-p~-p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~Y~C~a~n~~g~- 88 (286)
.+|+.++|.|.+.|. |. | .|.|++++..+........ .....+. ....|.|.++..+|+|.|+|.|.|..+.
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~--~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 216 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPS--QDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS 216 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCce--ecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc
Confidence 789999999999997 65 5 9999998854321100000 0001111 1234889999999999999999987542
Q ss_pred ----EE----------------------------Ee-c-----------------CCCCC---eeEEEeeCCccCcCC--
Q psy15667 89 ----CE----------------------------IT-P-----------------YDSGP---YLIAWFKDGRQIPGR-- 113 (286)
Q Consensus 89 ----~~----------------------------~~-~-----------------~~~~~---~~~~W~~~g~~l~~~-- 113 (286)
.. +. + .+..| +.++| +++......
T Consensus 217 ~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~~~~~~~~~~~ 295 (475)
T 1iga_A 217 QDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQG 295 (475)
T ss_pred eeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-CCCCcCCcccc
Confidence 01 00 0 00112 48999 443322110
Q ss_pred ----C------CcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEE---EcCCCceecCCc--eEEecCCCEEEEeeE
Q psy15667 114 ----T------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ---LGGLPYVRLIPK--VTAIDGEGLSIKCPV 178 (286)
Q Consensus 114 ----~------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~---v~~~~~~~~~~~--~~~~~g~~~~l~c~~ 178 (286)
. ....|.|.++..+|+|.|+|.|.|..+... ....|. +...|.+...+. ..+..|+.+.|.|.+
T Consensus 296 ~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~-~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~ 374 (475)
T 1iga_A 296 PPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP-LTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLA 374 (475)
T ss_pred CceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCc-eEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEE
Confidence 0 124699999999999999999999887642 233342 234455544332 235679999999999
Q ss_pred eeecC--CeEEEEEcCCc
Q psy15667 179 AGYPI--EEVHWEKVPPK 194 (286)
Q Consensus 179 ~~~p~--~~v~w~~~~~~ 194 (286)
.|.++ +.|.|.+.+..
T Consensus 375 ~g~~P~~~~v~W~k~g~~ 392 (475)
T 1iga_A 375 RGFSPKDVLVRWLQGSQE 392 (475)
T ss_pred eeeECCCCEEEEEECCEE
Confidence 99643 48999996543
No 235
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.65 E-value=1.2e-15 Score=106.04 Aligned_cols=85 Identities=25% Similarity=0.513 Sum_probs=71.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC-eeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN-RFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++++..+..+. ++.. ...++ ...|.|.+++.+|+|.|+|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~----~~~~~-~~~L~i~~~~~~D~G~Y~C 79 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAE----EAEGG-LCRLRILAAERGDAGFYTC 79 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEE----ECGGG-EEEEEESSCCGGGCEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEE----ECCCC-EEEEEEccCCcCCCEEEEE
Confidence 7899999999999999999999999999999999999999987543 3332 11222 3469999999999999999
Q ss_pred EEEcCCEEEEE
Q psy15667 81 VAENRAGTCEI 91 (286)
Q Consensus 81 ~a~n~~g~~~~ 91 (286)
.|.|..|....
T Consensus 80 ~a~N~~g~~~~ 90 (99)
T 1u2h_A 80 KAVNEYGARQC 90 (99)
T ss_dssp EEEETTEEEEE
T ss_pred EEEECCCceeE
Confidence 99999987653
No 236
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=105.65 Aligned_cols=84 Identities=21% Similarity=0.483 Sum_probs=72.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+..+.++.+.. .+. ...|.|.++..+|+|.|+|.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~----~~~-~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSE----DKG-GFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEE----ETT-EEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEE----eCC-EEEEEECCCCcccCEEEEEE
Confidence 7899999999999999999999999999999999999999998777775431 122 23599999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 81 a~n~~g~~~ 89 (99)
T 3puc_A 81 VKNSAGSVS 89 (99)
T ss_dssp EEETTEEEE
T ss_pred EEeCCCcEe
Confidence 999988764
No 237
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.64 E-value=6e-14 Score=112.34 Aligned_cols=159 Identities=17% Similarity=0.292 Sum_probs=112.8
Q ss_pred CeeEeccccccccCCCcEEEEEEeec-CC---CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASG-NP---TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g-~p---~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
+.+++.|....+..|+.++|+|.+.| .| ...++|+|||.++.... ..|.|..++..|+|.|
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT---------------~tLti~s~t~sdSG~Y 67 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNT---------------ATLTVADATSENAGSY 67 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCS---------------SEEEESSCCGGGCEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCc---------------ceEEeeeccccCCeEE
Confidence 56788999999999999999998874 57 34799999998875321 1377999999999999
Q ss_pred EEEEEcCCEEEE----------------Ee------------------c--CC-CC-----CeeEEEeeCCccCcCCCCc
Q psy15667 79 ACVAENRAGTCE----------------IT------------------P--YD-SG-----PYLIAWFKDGRQIPGRTSS 116 (286)
Q Consensus 79 ~C~a~n~~g~~~----------------~~------------------~--~~-~~-----~~~~~W~~~g~~l~~~~~~ 116 (286)
+|.+.+..|... +. . .+ .+ ...+.|+||+..+.. .
T Consensus 68 qCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg---A 144 (304)
T 3shs_A 68 KVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT---T 144 (304)
T ss_dssp EEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES---S
T ss_pred EEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC---c
Confidence 999987554110 10 0 01 11 358999999987753 3
Q ss_pred ceEEEccCCCCCCeeEEEEEEcCCc-ceeeeeeEEEEcCCCc-eecCCceEEecCCCEEEEeeEe
Q psy15667 117 TSLVINPVGREDRGIYQCIARRSDG-DVAQGSAELQLGGLPY-VRLIPKVTAIDGEGLSIKCPVA 179 (286)
Q Consensus 117 ~~l~i~~v~~~d~G~Y~C~a~~~~g-~~~~~~~~l~v~~~~~-~~~~~~~~~~~g~~~~l~c~~~ 179 (286)
..|.+......++|.|+|.+.|..+ ...+.+..+.+..... ..+.....+..|+.+.|...+.
T Consensus 145 q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 209 (304)
T 3shs_A 145 QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVS 209 (304)
T ss_dssp SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETTSCEEECCEEE
T ss_pred cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcCcEEEEEEEEe
Confidence 4678888899999999999999866 4444455555533322 1223344567788888876653
No 238
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.64 E-value=1.2e-14 Score=115.73 Aligned_cols=196 Identities=20% Similarity=0.237 Sum_probs=101.2
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.+..+.+.+|++++|.|.+.+.| .+.+.|+|+... ....+++ .+.. .|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~--~~~~~l~--------------~~~~-----~~~-------- 56 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPG--KGLEWIA--------------AISS-----GGS-------- 56 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTT--SCCEEEE--------------EECT-----TCC--------
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCC--CCcEEEE--------------EEcC-----CCC--------
Confidence 36677899999999999999865 578999986311 0011111 0000 000
Q ss_pred CEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcCC----Ccee
Q psy15667 86 AGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGGL----PYVR 159 (286)
Q Consensus 86 ~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~~----~~~~ 159 (286)
....+ .....+....+. ......|.|.++..+|+|.|.|.+.+..+. .....+.|.|... |.+.
T Consensus 57 ---~~~~~--~~~~R~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~ 126 (215)
T 1c5d_H 57 ---PYYNS--ALKSRLSINRDT-----SKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVY 126 (215)
T ss_dssp ---EECCT--TTGGGEEEEEET-----TTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEE
T ss_pred ---cEECC--cccCcEEEEeeC-----CCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEE
Confidence 00000 000011111111 012357899999999999999999876421 1112345655421 1111
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR 238 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~ 238 (286)
..+ +...+.+|+.+.|.|.+....|.+ .+.|+++|..+...
T Consensus 127 ~~~--------------------------------------~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 168 (215)
T 1c5d_H 127 PLA--------------------------------------PGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVH 168 (215)
T ss_dssp EEC--------------------------------------CCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCC
T ss_pred ecc--------------------------------------CChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceE
Confidence 000 011244566777777665443555 78888887654211
Q ss_pred CCceeeecCCC--eeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 239 FPVNVSDLDSF--SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 239 ~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
........... ...|. ....+| |.|+|.|.|..|.......+
T Consensus 169 ~~~~~~~~g~~~~~s~L~--~~~~~~-g~ytC~v~n~~~~~~~~~~~ 212 (215)
T 1c5d_H 169 TFPAVLQSGLYTLTSSVT--SSTWPS-QTVTCNVAHPASSTKVDKKL 212 (215)
T ss_dssp BCCCEEETTEEEEEEEEE--ESSTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred ecCcccCCCCEEEEEEEe--cccCCC-CeEEEEEEeCCCCccEEEec
Confidence 10001110100 11233 344456 99999999999886655443
No 239
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.64 E-value=9.4e-16 Score=106.82 Aligned_cols=85 Identities=28% Similarity=0.495 Sum_probs=70.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++||..+..+.+..... . .+....|.|.+++.+|+|.|+|.
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~--~--~~~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIV--S--EKGLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEE--E--TTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEE--c--CCCeEEEEECCCCcccCEEEEEE
Confidence 7888888888999999999999999999999999999999987655432211 1 12224699999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 81 a~n~~g~~~ 89 (100)
T 2kdg_A 81 AKNRAGEAT 89 (100)
T ss_dssp EEETTEEEE
T ss_pred EEcCCCeEE
Confidence 999998754
No 240
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.63 E-value=1.7e-15 Score=125.93 Aligned_cols=224 Identities=14% Similarity=0.192 Sum_probs=77.3
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCe-eEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPD-IGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~-v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
+.+.+.+.++.+|+++.|.|.+. .+.|. +.|.-. +... ... ..+.....|.|.++..+ |.|.|++.
T Consensus 2 ~~v~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~---l~~~-~~~------~~g~~~~~~~l~~v~~~--~~y~C~~~ 68 (291)
T 1mq8_A 2 TSVSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETP---LPKK-ELL------LPGNNRKVYELSNVQED--SQPMCYSN 68 (291)
T ss_dssp EEEECSEEEECTTCEEEEEEEEC-CSSCSEEEEECS---SCCC-CCC------CSCSSEEEEEEESCCSC--CCCEEEEE
T ss_pred eEEeCCccEEcCCCeEEEEEeCC-CCCCccceEEec---CCCc-ccc------cCCCceEEEEEEecccC--CeEEEEEE
Confidence 56677888999999999999986 45555 888531 1111 000 01222234778888743 46999996
Q ss_pred cCCEEEE----Ee----------------------------cCCCCC---eeEEEeeCCccCcCCC-----CcceEEEcc
Q psy15667 84 NRAGTCE----IT----------------------------PYDSGP---YLIAWFKDGRQIPGRT-----SSTSLVINP 123 (286)
Q Consensus 84 n~~g~~~----~~----------------------------~~~~~~---~~~~W~~~g~~l~~~~-----~~~~l~i~~ 123 (286)
...-..+ +. ..+..| ..|+|||+++.+.... ....|.+..
T Consensus 69 ~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~~ 148 (291)
T 1mq8_A 69 CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLV 148 (291)
T ss_dssp CSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECCC
T ss_pred cCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEeee
Confidence 4421111 10 011122 2589999998875321 123455444
Q ss_pred CCCCCCeeEEEEEEcCCcc-------eeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccc
Q psy15667 124 VGREDRGIYQCIARRSDGD-------VAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIE 196 (286)
Q Consensus 124 v~~~d~G~Y~C~a~~~~g~-------~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~ 196 (286)
...+|.+.|+|.|.|..+. ..+....|+|+.+|..... +.
T Consensus 149 ~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~---------------------------------~~ 195 (291)
T 1mq8_A 149 RRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQ---------------------------------LV 195 (291)
T ss_dssp SSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------------
T ss_pred eeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCce---------------------------------ec
Confidence 4444445999999986542 1122345555544321000 00
Q ss_pred ccccccCCCCCCCeEEEEEeeecCCCC--CeEEEEeCCeeCCCCCCceeeecCCCeeeEEEccc---CCC--CCeEEEEE
Q psy15667 197 SFAFPFDGLPEGARTRVICGVTHGDPP--LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV---SAA--HSGEYTCV 269 (286)
Q Consensus 197 ~~~~~~~~~~~g~~~~l~c~~~~~~p~--~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v---~~~--d~G~Y~C~ 269 (286)
. ...+.+|+.+.|.|.+....|+ ..+.|.++|+.+...... . +..+.+... ..+ +++.|+|.
T Consensus 196 ---~-p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~~---~----g~~~~~~~~~~~~~~~~~~~~~~C~ 264 (291)
T 1mq8_A 196 ---S-PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTY---G----NDSFSAKASVSVTAEDEGTQRLTCA 264 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---C-CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceeee---c----CCeEEEEEecceeEcCCCCEEEEEE
Confidence 0 0124566666666665433343 358899999887542111 1 112233222 343 47777788
Q ss_pred EEecccceeeEEEEEE
Q psy15667 270 ASNTAAQARYSSKLQV 285 (286)
Q Consensus 270 a~N~~g~~~~~~~L~V 285 (286)
|.|........-.|.|
T Consensus 265 ~~~~~~~~~~~~~l~v 280 (291)
T 1mq8_A 265 VILGNQSQETLQTVTI 280 (291)
T ss_dssp ----------------
T ss_pred EEeCCcceEEEEEEEE
Confidence 8875444444444443
No 241
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=6.4e-16 Score=107.88 Aligned_cols=78 Identities=23% Similarity=0.418 Sum_probs=67.9
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++++.+|++++|.|.+ .|.|.+.|+|||..|..+.++.+.. .+ ....|.|.++..+|+|.|+|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~----~~-~~~~L~I~~v~~~D~G~Y~C 78 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQ----KG-RIHKLVIANALTEDEGDYVF 78 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEE----CS-SEEEEEESSCCGGGCSEEEE
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEE----eC-CEEEEEECCCChhhCEEEEE
Confidence 48899999999999999999999999 8999999999999998888876521 22 23469999999999999999
Q ss_pred EEEcC
Q psy15667 81 VAENR 85 (286)
Q Consensus 81 ~a~n~ 85 (286)
.|.|.
T Consensus 79 ~a~N~ 83 (100)
T 2yuz_A 79 APDAY 83 (100)
T ss_dssp EESSS
T ss_pred EEcCC
Confidence 99997
No 242
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.62 E-value=2.6e-15 Score=105.89 Aligned_cols=84 Identities=26% Similarity=0.480 Sum_probs=72.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++++..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|.
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~----~~-~~~~L~i~~~~~~D~G~Y~C~ 87 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPA----DG-AEHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCE----ET-TEEEEEESSCCGGGCEEEEEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEe----CC-CEEEEEEccCCHHhCEEEEEE
Confidence 7899999999999999999999999999999999999999998777765432 22 223699999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 88 a~n~~g~~~ 96 (107)
T 3irg_B 88 ARNAAGEAY 96 (107)
T ss_dssp EEETTEEEE
T ss_pred EEcCCCcEE
Confidence 999988754
No 243
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.62 E-value=5.2e-14 Score=113.37 Aligned_cols=78 Identities=19% Similarity=0.316 Sum_probs=45.6
Q ss_pred CCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeee-cC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 207 EGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSD-LD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~-~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
.|+.+.|.|.+....| +..+.|+++|..+.......... .. .....|.|......| |.|+|.|.|..+.......
T Consensus 146 ~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~ 224 (232)
T 3qhz_H 146 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKR 224 (232)
T ss_dssp --CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEE
Confidence 4555555555543333 34567887775331100000000 00 013468899999999 9999999999988877776
Q ss_pred EEE
Q psy15667 283 LQV 285 (286)
Q Consensus 283 L~V 285 (286)
|.+
T Consensus 225 l~~ 227 (232)
T 3qhz_H 225 VEP 227 (232)
T ss_dssp CCC
T ss_pred eCC
Confidence 654
No 244
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1.7e-15 Score=105.32 Aligned_cols=82 Identities=27% Similarity=0.546 Sum_probs=69.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+........ .+ ...|.|.++..+|+|.|+|.
T Consensus 11 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~------~~--~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCE------AG--VAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp EEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEEE------TT--EEEEEECSCCTTCCBCEEEE
T ss_pred CCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEee------CC--eEEEEECCCChhhCEEEEEE
Confidence 78899899999999999999999999999999999999988875443221 11 23589999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 83 a~N~~g~~~~ 92 (99)
T 2yr3_A 83 AENALGQVSC 92 (99)
T ss_dssp EECSSCEEEE
T ss_pred EEECCCeEEE
Confidence 9999987653
No 245
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.61 E-value=2e-15 Score=104.24 Aligned_cols=80 Identities=28% Similarity=0.498 Sum_probs=69.3
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.|.| |.+.|+|||..+..+.++.+. +. .|.|.+++.+|+|.|+|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~------~~---~L~i~~~~~~D~G~Y~C 77 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT------GE---EVEVRDSIPADSGLYAC 77 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC------SS---EEEESSCCGGGSEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe------CC---EEEECCCChHHCEEEEE
Confidence 378888888899999999999999999998 899999999999877776542 11 48999999999999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 78 ~a~n~~g~~~ 87 (95)
T 2ckn_A 78 VTSSPSGSDT 87 (95)
T ss_dssp EEEETTEEEE
T ss_pred EeccCCCcEE
Confidence 9999988754
No 246
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.61 E-value=8.9e-15 Score=126.54 Aligned_cols=68 Identities=16% Similarity=0.255 Sum_probs=40.7
Q ss_pred CCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeeec-C---CCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 208 GARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDL-D---SFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 208 g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~~-~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
|+.+.|.|.+....| .+.|+|+|||..+........... + .....|.|.....+|.|.|+|.|.|..-
T Consensus 289 g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 289 KDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 444555555443222 467888888887643221111111 1 1134577888778889999999999864
No 247
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.61 E-value=1.5e-14 Score=118.58 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=27.5
Q ss_pred ccccccccCCCcEEEEEEeecCC--CCeeEEeeCC
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG 40 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~ 40 (286)
.+..+++.+|++++|.|.+.+.| .+.+.|+|+.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQA 40 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEEC
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEEC
Confidence 35567899999999999999876 6789999853
No 248
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.60 E-value=3.8e-15 Score=106.88 Aligned_cols=86 Identities=24% Similarity=0.380 Sum_probs=72.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++++..+.. ..++.+.. .+.....|.|.+++.+|+|.|+|
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C 90 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQ----DNTGRVTLLIKDVNKKDAGWYTV 90 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEE----CTTCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEe----CCCCeEEEEECCCCcccCEEEEE
Confidence 78999999999999999999999999999999999999999874 45554321 22223369999999999999999
Q ss_pred EEEcCCEEEEE
Q psy15667 81 VAENRAGTCEI 91 (286)
Q Consensus 81 ~a~n~~g~~~~ 91 (286)
.|.|..|....
T Consensus 91 ~a~N~~G~~~~ 101 (116)
T 2kkq_A 91 SAVNEAGVTTC 101 (116)
T ss_dssp EEEETTEEEEE
T ss_pred EEEcCCCeEEE
Confidence 99999987643
No 249
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2.6e-15 Score=106.57 Aligned_cols=86 Identities=24% Similarity=0.504 Sum_probs=71.7
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++|+..+.. ..++.+.. ..+....|.|.+++.+|+|.|+
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQR----DLDGTCSLHTTASTLDDDGNYT 82 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEE----CTTCEEEEEESSCCTTTCSCCE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEE----CCCcEEEEEECCCChhhCEEEE
Confidence 489999999999999999999999999999999999999998875 45554321 1122246999999999999999
Q ss_pred EEEEcCCEEEE
Q psy15667 80 CVAENRAGTCE 90 (286)
Q Consensus 80 C~a~n~~g~~~ 90 (286)
|.|.|..|...
T Consensus 83 C~a~N~~g~~~ 93 (110)
T 2dm2_A 83 IMAANPQGRIS 93 (110)
T ss_dssp EEEECTTCCEE
T ss_pred EEEEECCCeEE
Confidence 99999988764
No 250
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.60 E-value=4.1e-14 Score=114.60 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=49.0
Q ss_pred CCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCceeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 205 LPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+..|+.+.|.|.+....|. ..+.|+++|..+...........+ .....|.|.....+| |.|+|.+.|..+.....
T Consensus 152 ~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 230 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 230 (239)
T ss_dssp C--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred hccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEE
Confidence 3456677777766554443 357788887643211000000000 113468899998899 99999999999887777
Q ss_pred EEEEE
Q psy15667 281 SKLQV 285 (286)
Q Consensus 281 ~~L~V 285 (286)
..|.+
T Consensus 231 ~~l~~ 235 (239)
T 3tv3_H 231 KRVEP 235 (239)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 76654
No 251
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.60 E-value=4.1e-15 Score=103.36 Aligned_cols=84 Identities=26% Similarity=0.539 Sum_probs=69.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.+..+.+|+++.|.|.+.|.|.|.+.|++++..+.. +.++.+.. . .....|.|.+++.+|+|.|+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~----~-~~~~~L~i~~v~~~D~G~Y~ 79 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN----T-DDLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEE----C-SSEEEEEESSCCGGGCEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEe----c-CCEEEEEEeecCcccCEEEE
Confidence 78888888888999999999999999999999999999999863 34554321 1 22346999999999999999
Q ss_pred EEEEcCCEEEE
Q psy15667 80 CVAENRAGTCE 90 (286)
Q Consensus 80 C~a~n~~g~~~ 90 (286)
|.|.|..|...
T Consensus 80 C~a~n~~g~~~ 90 (100)
T 3irg_A 80 LSLGNEFGSDS 90 (100)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEeCCCcEE
Confidence 99999988754
No 252
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.59 E-value=9.5e-16 Score=129.73 Aligned_cols=136 Identities=15% Similarity=0.240 Sum_probs=90.7
Q ss_pred eeEeccccccccCCCcEEEEEEeecC-CCC---eeEEeeCC-EEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCe
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGN-PTP---DIGWTLDG-FELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGG 76 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p---~v~W~~~~-~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G 76 (286)
.+...+....+.+|++++|.|.+.|. |.| .|.|++++ ..+........ ...++. ....|.|.++..+|+|
T Consensus 115 v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~---~~~~g~~~~~~~L~I~~~~~~D~G 191 (323)
T 2wqr_A 115 AYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEE---KQRNGTLTVTSTLPVGTRDWIEGE 191 (323)
T ss_dssp EEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEE---ECTTSCEEEEEEEECCHHHHHTTC
T ss_pred EEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCc---cCCCCCEEEEEEEEECHHHccCCC
Confidence 34444555578899999999999885 566 89999975 44432222111 001111 2235999999999999
Q ss_pred EEEEEEEcCCE----EEEEe--------------cC-----------------CCCC--eeEEEeeCCccCcCC------
Q psy15667 77 EYACVAENRAG----TCEIT--------------PY-----------------DSGP--YLIAWFKDGRQIPGR------ 113 (286)
Q Consensus 77 ~Y~C~a~n~~g----~~~~~--------------~~-----------------~~~~--~~~~W~~~g~~l~~~------ 113 (286)
.|+|.|.|..+ ...+. +. +..| ..+.|+|||..+...
T Consensus 192 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 271 (323)
T 2wqr_A 192 TYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQ 271 (323)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECC
T ss_pred CEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecC
Confidence 99999998642 11110 00 0012 269999999987531
Q ss_pred ---C------CcceEEEccCCCCCCeeEEEEEEcCCcc
Q psy15667 114 ---T------SSTSLVINPVGREDRGIYQCIARRSDGD 142 (286)
Q Consensus 114 ---~------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~ 142 (286)
. ..+.|.|.++..+|+|.|+|.|.|....
T Consensus 272 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 272 PRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred cccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 0 1245889999999999999999997654
No 253
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.59 E-value=2.8e-14 Score=116.52 Aligned_cols=197 Identities=15% Similarity=0.215 Sum_probs=103.7
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
+...+..+++.+|++++|.|.+.+.+.+.+.|+|... .....+. +... +.+.+.-...
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~--~~~~~~~--------------~~~~-----~~~~~~~~~~- 61 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDL--QKQLQWL--------------FTLR-----SPGDKEVKSL- 61 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEET--TCCEEEE--------------EEEC-----STTCEEEEEE-
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECC--CCCcEEE--------------EEEC-----CCcceecCCc-
Confidence 3445667789999999999999888999999997421 1111111 0000 0000000000
Q ss_pred CCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc-----eeeeeeEEEEcCCCcee
Q psy15667 85 RAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD-----VAQGSAELQLGGLPYVR 159 (286)
Q Consensus 85 ~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~-----~~~~~~~l~v~~~~~~~ 159 (286)
.+ ..+...+++ ... |.|.++..+|+|.|+|.+.+..+. .......|.|.......
T Consensus 62 -~~-----------~R~~~~~~~-------~~~-L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~ 121 (253)
T 3to4_D 62 -PG-----------ADYLATRVT-------DTE-LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNV 121 (253)
T ss_dssp -TT-----------EEEEEECCS-------SSC-CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTC
T ss_pred -cC-----------CcEEEEeCC-------CCe-EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCC
Confidence 00 011111111 112 999999999999999999876431 11112344443211000
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCC-eEEEEeCCeeCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPL-TIRWLKDGKPLSPR 238 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~-~~~W~~~g~~~~~~ 238 (286)
..|...+. . + ....+.+|+.+.|.|.+....|++ .+.|+|+|..+...
T Consensus 122 ~~P~v~~~----------------------~-~--------~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~ 170 (253)
T 3to4_D 122 FPPEVAVF----------------------E-P--------SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 170 (253)
T ss_dssp BCCEEEEE----------------------E-C--------CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred CCCeEEEe----------------------C-C--------ChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCc
Confidence 11111110 0 0 001122356677777766545555 78899999877543
Q ss_pred CCceeee-------cCC---CeeeEEEcccCCCC-CeEEEEEEEecc
Q psy15667 239 FPVNVSD-------LDS---FSSLLSINSVSAAH-SGEYTCVASNTA 274 (286)
Q Consensus 239 ~~~~~~~-------~~~---~~~~L~i~~v~~~d-~G~Y~C~a~N~~ 274 (286)
....... .+. ....|.|.....+| .|.|+|.+.|..
T Consensus 171 ~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 171 VSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred eecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 2110000 000 12467888888888 789999999974
No 254
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.59 E-value=1.1e-14 Score=109.88 Aligned_cols=86 Identities=24% Similarity=0.475 Sum_probs=73.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|+|++..+..+.++.+.. ..+....|.|.+++..|+|.|+|.
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDY----DEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE----CTTCEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEE----CCCCeEEEEECCCChhcCEEEEEE
Confidence 6889999999999999999999999999999999999999998777765421 112234699999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 117 a~N~~G~~~~ 126 (154)
T 1fhg_A 117 AVNSLGEATC 126 (154)
T ss_dssp EEETTEEEEE
T ss_pred EEECCCeEEE
Confidence 9999987643
No 255
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=99.35 Aligned_cols=76 Identities=24% Similarity=0.464 Sum_probs=66.4
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.+|.|...+..+.+.+|++++|.|.+.|+|.|.+.|+|++..+....+ ..|.|.+++.+|+|.|+|
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C 67 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK--------------KLYMVPYVDLEHQGTYWC 67 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS--------------SEEEESSCCGGGCEEEEE
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC--------------CeEEECCCCHHhCEEEEE
Confidence 368888899999999999999999999999999999999998865422 148899999999999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 68 ~a~n~~g~~~ 77 (91)
T 3bfo_A 68 HVYNDRDSQD 77 (91)
T ss_dssp EEECSSCEEE
T ss_pred EEEcCCCCEE
Confidence 9999988643
No 256
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=107.03 Aligned_cols=87 Identities=16% Similarity=0.268 Sum_probs=70.9
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCC-CeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPT-PDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~-p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.+.|. +.+.|+|||..|..+.++.+.. .+. ...|.|.+++.+|+|.|+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~----~~~-~~~L~I~~v~~~D~G~Y~ 81 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATR----QGR-KYILVVREAAPSDAGEVV 81 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEE----ETT-EEEEEECSCCTTTCSCEE
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEE----cCC-EEEEEECCCCHHHCEEEE
Confidence 3678888899999999999999999999875 4899999999998777775432 222 346999999999999999
Q ss_pred EEEEcCCEEEEEe
Q psy15667 80 CVAENRAGTCEIT 92 (286)
Q Consensus 80 C~a~n~~g~~~~~ 92 (286)
|.|.|....+.+.
T Consensus 82 C~a~~~~~~a~L~ 94 (104)
T 2eny_A 82 FSVRGLTSKASLI 94 (104)
T ss_dssp EEETTEEEEECEE
T ss_pred EEECCeeEEEEEE
Confidence 9998876555443
No 257
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.58 E-value=8.4e-14 Score=112.08 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=28.8
Q ss_pred eEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD 39 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~ 39 (286)
+...+..+++.+|++++|.|.+.+. +.+.+.|+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQ 40 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEE
Confidence 4455677789999999999999874 6678999985
No 258
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=8.3e-15 Score=101.75 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=61.5
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....+..+.........|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 17 v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 95 (99)
T 1g1c_A 17 VGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLL 95 (99)
T ss_dssp EETTSCEEEEEEEE-EESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEE-EeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEE
Confidence 34555555555554 55667888999999887665554433233456899999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 96 V~ 97 (99)
T 1g1c_A 96 VQ 97 (99)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 259
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=5.6e-15 Score=103.50 Aligned_cols=87 Identities=22% Similarity=0.444 Sum_probs=72.2
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.+ |.+.+.|+||+..+..+.++.+.. .+. ...|.|.+++.+|+|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~----~~~-~~~L~I~~v~~~D~G~Y~C 80 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVC----EGT-MAMLVIRGASLKDAGEYTC 80 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEE----ETT-EEEEEESSCCTTTCSEEEE
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEE----CCC-EEEEEECCCCcccCEEEEE
Confidence 3889999999999999999999999997 888999999999998777775432 222 3469999999999999999
Q ss_pred EEEcCCEEEEEec
Q psy15667 81 VAENRAGTCEITP 93 (286)
Q Consensus 81 ~a~n~~g~~~~~~ 93 (286)
.|.|....+.+..
T Consensus 81 ~a~n~~~~~~l~V 93 (103)
T 2edf_A 81 EVEASKSTASLHV 93 (103)
T ss_dssp ECSSCEEEEEEEE
T ss_pred EEccCCcEEEEEE
Confidence 9999766655543
No 260
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=7.2e-15 Score=102.34 Aligned_cols=81 Identities=36% Similarity=0.694 Sum_probs=68.2
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.|+|.|.+.|++++..+.. +.++.+. ..+ .|.|.+++.+|+|.|+
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~----~L~i~~v~~~d~G~Y~ 78 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQ----EQG----TLQIKNLRISDTGTYT 78 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEEC----TTC----CEEEESCCTTTCCEEE
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEc----CCC----EEEEccCCcccCEEEE
Confidence 389999999999999999999999999999999999999998873 4444321 122 4889999999999999
Q ss_pred EEEEcCCEEE
Q psy15667 80 CVAENRAGTC 89 (286)
Q Consensus 80 C~a~n~~g~~ 89 (286)
|.|.|..|..
T Consensus 79 C~a~n~~g~~ 88 (100)
T 2edj_A 79 CVATSSSGET 88 (100)
T ss_dssp EEEECSSCCC
T ss_pred EEEEcCCCCE
Confidence 9999987743
No 261
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.58 E-value=2.4e-14 Score=103.23 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=64.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEe-ccc-ceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVS-GHG-DVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~-~~~-~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||+|. ..+ ...+..+.|.|.+.|+|.|.|+|+|||.+|..+.++.+..... ... .....|.|.+++..|+|.|+
T Consensus 4 pP~I~--l~~--~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Yt 79 (126)
T 1he7_A 4 PASVQ--LHT--AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYT 79 (126)
T ss_dssp CCCCC--CCC--CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEE
T ss_pred CCEEE--ccC--CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEE
Confidence 67762 222 3477899999999999999999999999998776643321100 001 01235899999999999999
Q ss_pred EEEEcCCEEEEEe
Q psy15667 80 CVAENRAGTCEIT 92 (286)
Q Consensus 80 C~a~n~~g~~~~~ 92 (286)
|.|.|..|....+
T Consensus 80 C~A~N~~G~~~~t 92 (126)
T 1he7_A 80 LLAANPFGQASAS 92 (126)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEECCCeEEEE
Confidence 9999999987654
No 262
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.58 E-value=2.1e-15 Score=106.44 Aligned_cols=83 Identities=27% Similarity=0.429 Sum_probs=70.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+.++.+.+|++++|.|.+.|.|.|.+.|+++|..+..+.++.+.. . .....|.|.+++.+|+|.|+|.
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~----~-~~~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTT----T-KYKSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEE----C-SSEEEEEECCCCSSCCSEEEEC
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEE----C-CCEEEEEECcCCchhCEEEEEE
Confidence 6889999999999999999999999999999999999999988777765421 1 1123699999999999999999
Q ss_pred EEcCCEEE
Q psy15667 82 AENRAGTC 89 (286)
Q Consensus 82 a~n~~g~~ 89 (286)
|.|..|..
T Consensus 89 a~N~~G~~ 96 (106)
T 1nct_A 89 VENSEGKQ 96 (106)
T ss_dssp CBCSSCBC
T ss_pred EEeCCCeE
Confidence 99987753
No 263
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.9e-15 Score=106.22 Aligned_cols=86 Identities=31% Similarity=0.519 Sum_probs=71.1
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++++..+..+.+..... ..+....|.|.+++.+|+|.|+|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLV----RENGVHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEE----CTTSCEEEEESSCCGGGCSBBCE
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEE----ecCCeEEEEEeeCCcccCEEEEE
Confidence 37999999999999999999999999999999999999999887655432211 11222469999999999999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 84 ~a~n~~g~~~ 93 (110)
T 2dm3_A 84 IATNRAGQNS 93 (110)
T ss_dssp EEECSSCEEE
T ss_pred EEECCCCEEE
Confidence 9999988754
No 264
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.58 E-value=3.1e-14 Score=99.83 Aligned_cols=87 Identities=21% Similarity=0.390 Sum_probs=63.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|.. .. ....|+.+.|.|.+.|+|.|.++|+|||..|..+.++...............|.|.++..+|+|.|+|.
T Consensus 4 pP~i~~-~~--~~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 80 (103)
T 1wwb_X 4 APTITF-LE--SPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLI 80 (103)
T ss_dssp CCCCCC-CC--CCCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEE
T ss_pred CCEEEe-cc--CceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEE
Confidence 666541 11 135688999999999999999999999999987655322111111112234599999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 81 A~N~~G~~~~ 90 (103)
T 1wwb_X 81 AKNEYGKDEK 90 (103)
T ss_dssp EECSSCEEEE
T ss_pred EEeCCCcEeE
Confidence 9999998654
No 265
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.58 E-value=2.6e-14 Score=98.89 Aligned_cols=84 Identities=15% Similarity=0.321 Sum_probs=69.2
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+.+...+.+..+.+|++++|.|.+.|. |.|.+.|++++..+..+.++.+.. .++ ...|.|.+++.+|+|.|+|.
T Consensus 2 ~~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~----~~~-~~~L~i~~v~~~D~G~Y~C~ 76 (97)
T 2bk8_A 2 AMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITY----EDG-VAILYVKDITKLDDGTYRCK 76 (97)
T ss_dssp CCEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEE----ETT-EEEEEECSCCGGGCEEEEEE
T ss_pred CceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEE----cCC-eEEEEEecCChhhCeEEEEE
Confidence 345566778899999999999999997 999999999999998777765422 122 23699999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 77 a~n~~g~~~~ 86 (97)
T 2bk8_A 77 VVNDYGEDSS 86 (97)
T ss_dssp EECSSCEEEE
T ss_pred EECCCCeEeE
Confidence 9999887653
No 266
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.1e-14 Score=104.66 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=65.4
Q ss_pred CCeeEe---ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTY---SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~---~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.|.+ ...++++.+|+++.|.|.+.|+|.|.+.|+|||..+. ..++.+. ..+....|.|.++..+|+|.|
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~-----~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVR-----TSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEE-----ECSSEEEEEESSCCTTTCEEE
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEE-----ECCCeEEEEECCCChhcCEEE
Confidence 566654 2456789999999999999999999999999999997 3444331 112234599999999999999
Q ss_pred EEEEEcCCEEE
Q psy15667 79 ACVAENRAGTC 89 (286)
Q Consensus 79 ~C~a~n~~g~~ 89 (286)
+|.|.|..|..
T Consensus 95 ~C~a~N~~G~~ 105 (118)
T 2e7c_A 95 ELSVQIENMKD 105 (118)
T ss_dssp EEEEECSSCEE
T ss_pred EEEEEeCCCeE
Confidence 99999998864
No 267
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=119.93 Aligned_cols=129 Identities=12% Similarity=0.170 Sum_probs=88.3
Q ss_pred ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE-
Q psy15667 12 QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE- 90 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~- 90 (286)
..+.+|+.+.|.|.+. .|.|.++|++++........+. .... +. ...|+|.|+|.|.|..+...
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~------~~~~----~~----~~~d~G~Y~C~a~n~~~~~~s 169 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYD------HQRG----FS----GIFEDRSYICKTTIGDREVDS 169 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEE------TTTE----EE----ECCCSSEEEEEEEETTEEEEC
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeec------CCcC----ee----eeccCcEEEEEEEeCCceeee
Confidence 5688999999999998 7888999998753322211111 0111 11 36799999999997665421
Q ss_pred ----Ee-----------------------------cCCCCCeeEEEeeCCccCcCC-------------CCcceEEEccC
Q psy15667 91 ----IT-----------------------------PYDSGPYLIAWFKDGRQIPGR-------------TSSTSLVINPV 124 (286)
Q Consensus 91 ----~~-----------------------------~~~~~~~~~~W~~~g~~l~~~-------------~~~~~l~i~~v 124 (286)
+. ..+.+++.+.|+++++..... .....|.|.++
T Consensus 170 ~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 249 (289)
T 3mjg_X 170 DAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSA 249 (289)
T ss_dssp CCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSC
T ss_pred eeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEccc
Confidence 10 011235689999877654221 12367999999
Q ss_pred CCCCCeeEEEEEEcCCcceeeeeeEEEEcCCC
Q psy15667 125 GREDRGIYQCIARRSDGDVAQGSAELQLGGLP 156 (286)
Q Consensus 125 ~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~ 156 (286)
..+|+|.|+|.|.|..|.. ..++.|+|...+
T Consensus 250 ~~~D~G~Y~C~a~N~~G~~-~~~~~l~v~~~~ 280 (289)
T 3mjg_X 250 ELEDSGTYTCNVTESVNDH-QDEKAINITVVE 280 (289)
T ss_dssp CSSCCEEEEEEEEETTTTE-EEEEEEEEEEEC
T ss_pred ChhhCcEEEEEeecCCCCc-eeEEEEEEEEEe
Confidence 9999999999999999986 457778775443
No 268
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=4.2e-15 Score=104.34 Aligned_cols=85 Identities=24% Similarity=0.387 Sum_probs=70.4
Q ss_pred CCeeEecccc---ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIE---QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~---~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.|...+.+ +++.+|++++|.|.+.+.|.+ +.|+||+..+..+.++.+.. .+ ....|.|.+++.+|+|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKM----DG-RKHRLILPEAKVQDSGEF 80 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEE----ET-TEEEEEESSCCTTTCEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEe----CC-CEEEEEECCCChhhCEEE
Confidence 6778777777 789999999999999999999 99999999998776765431 12 234699999999999999
Q ss_pred EEEEEcCCEEEEEe
Q psy15667 79 ACVAENRAGTCEIT 92 (286)
Q Consensus 79 ~C~a~n~~g~~~~~ 92 (286)
+|.|.|..+.+.+.
T Consensus 81 ~C~a~n~~~~~~l~ 94 (104)
T 2e6p_A 81 ECRTEGVSAFFGVT 94 (104)
T ss_dssp EEECSSCCCCEEEE
T ss_pred EEEECCceEEEEEE
Confidence 99999987766554
No 269
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.57 E-value=5.9e-16 Score=123.34 Aligned_cols=72 Identities=15% Similarity=0.319 Sum_probs=43.6
Q ss_pred CCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCce--eeec----CC---CeeeEEEcccCCCCCeEEEEEEEecc
Q psy15667 205 LPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN--VSDL----DS---FSSLLSINSVSAAHSGEYTCVASNTA 274 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~--~~~~----~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~ 274 (286)
+.+|+.+.|.|.+....|+ +.+.|+|||..+....... .... ++ ....|.|.....+|.|.|+|.|.|..
T Consensus 119 ~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~ 198 (214)
T 1ow0_A 119 LALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEA 198 (214)
T ss_dssp TTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTT
T ss_pred hccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCC
Confidence 5567777788877644443 5899999998876441110 0111 10 12234444444456899999999986
Q ss_pred cc
Q psy15667 275 AQ 276 (286)
Q Consensus 275 g~ 276 (286)
-.
T Consensus 199 l~ 200 (214)
T 1ow0_A 199 LP 200 (214)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 270
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=8e-15 Score=102.78 Aligned_cols=84 Identities=21% Similarity=0.337 Sum_probs=67.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC--eeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN--RFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.++.+.+|++++|.|.+.+ |.+.+.|+||+..|..+. ++.+.. .+ ....|.|.+++.+|+|.|+
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRV----EG-KKHILIIEGATKADAAEYS 80 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEE----ET-TEEEEEEEEECTTTCSEEE
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEE----cC-CEEEEEECCCCcccCEEEE
Confidence 455888888999999999999999987 779999999999998766 544421 12 2346999999999999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.|....+.+
T Consensus 81 C~a~n~~~~~~l 92 (103)
T 1x44_A 81 VMTTGGQSSAKL 92 (103)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCCcEEEEE
Confidence 999995444444
No 271
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.57 E-value=2.2e-14 Score=103.49 Aligned_cols=79 Identities=25% Similarity=0.300 Sum_probs=64.4
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecC------CCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD------SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
..+..+.|.|.+ .|.|.|.|+|+|+|..+....+..+.... ...+.|.|.++..+|+|.|+|.|.|..|...+
T Consensus 13 ~~~~~~~l~c~v-~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 13 VEMHHWCIPFSV-DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCEEEEEEEE-CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred ccCccEEEEEEE-eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 356788899987 48999999999999999876654332211 12468999999999999999999999999999
Q ss_pred EEEEEE
Q psy15667 280 SSKLQV 285 (286)
Q Consensus 280 ~~~L~V 285 (286)
++.|.|
T Consensus 92 t~~l~v 97 (126)
T 1he7_A 92 SIMAAF 97 (126)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 988865
No 272
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.57 E-value=5.8e-15 Score=105.95 Aligned_cols=90 Identities=26% Similarity=0.433 Sum_probs=66.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCee-EeceEEecccce-eEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRF-VIGQFVSGHGDV-ISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~-~~~~~~~~~~~~-~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+..+... ........++.. ...|.|.+++.+|+|.|+
T Consensus 9 pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~ 88 (117)
T 2v9t_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (117)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEE
T ss_pred CCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEE
Confidence 789999999999999999999999999999999999999988643210 000011112221 112333477899999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.|..|....
T Consensus 89 C~a~N~~G~~~s 100 (117)
T 2v9t_A 89 CVARNYLGEAVS 100 (117)
T ss_dssp EEEEETTEEEEC
T ss_pred EEEEeCccceEe
Confidence 999999998753
No 273
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.56 E-value=1.2e-14 Score=117.77 Aligned_cols=44 Identities=16% Similarity=0.422 Sum_probs=32.7
Q ss_pred CCeeEecccccc-ccCCCcEEEEEEeecCC----CCeeEEeeCCEEcCC
Q psy15667 2 PPILTYSFIEQT-LQPGPAVSLKCIASGNP----TPDIGWTLDGFELPT 45 (286)
Q Consensus 2 ~p~~~~~~~~~~-~~~G~~~~l~C~~~g~p----~p~v~W~~~~~~l~~ 45 (286)
|+++.+.+.... +..|+.++|.|.+.|.+ ...|+|++||..+..
T Consensus 23 P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~ 71 (240)
T 4acp_A 23 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN 71 (240)
T ss_dssp CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECC
T ss_pred CEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCC
Confidence 334444554555 77899999999999964 337999999998854
No 274
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.56 E-value=2.3e-13 Score=110.97 Aligned_cols=200 Identities=14% Similarity=0.177 Sum_probs=103.2
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
.+...+..+.+.+|++++|.|.+. .+.+.+.|+++... ....+. +...+ .+.+. ..
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~--~~~~~l--------------~~~~~-----~~~~~--~~ 60 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPG--QGLRLI--------------YYSQI-----VNDFQ--KG 60 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTT--CCEEEE--------------EEESS-----TTCCE--EC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCC--CCeEEE--------------EEEcc-----Ccccc--CC
Confidence 455566778999999999999985 46789999986311 000111 00110 00000 00
Q ss_pred cCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcc--eeeeeeEEEEcCCCceecC
Q psy15667 84 NRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGGLPYVRLI 161 (286)
Q Consensus 84 n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~--~~~~~~~l~v~~~~~~~~~ 161 (286)
.. ...+...++ ......|.|.++..+|+|.|.|.+.+..+. .......|.|.........
T Consensus 61 ~~------------~~R~~~~~~------~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~ 122 (252)
T 1oga_E 61 DI------------AEGYSVSRE------KKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFP 122 (252)
T ss_dssp SS------------CTTEEECCS------STTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBC
T ss_pred cc------------CCcEEEEec------CCCEEEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCC
Confidence 00 001111111 123457999999999999999999885211 1111234554321000001
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCC
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFP 240 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~ 240 (286)
|...+. . + ....+.+|+.+.|.|.+....|. +.+.|+|+|..+.....
T Consensus 123 P~v~~~----------------------~-~--------~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~ 171 (252)
T 1oga_E 123 PEVAVF----------------------E-P--------SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVS 171 (252)
T ss_dssp CEEEEE----------------------C-C--------CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEE
T ss_pred CeEEEE----------------------C-C--------ChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcc
Confidence 111110 0 0 00112346666777766544443 48889998887754321
Q ss_pred ce--ee-----ecC---CCeeeEEEcccCCC-CCeEEEEEEEecccc
Q psy15667 241 VN--VS-----DLD---SFSSLLSINSVSAA-HSGEYTCVASNTAAQ 276 (286)
Q Consensus 241 ~~--~~-----~~~---~~~~~L~i~~v~~~-d~G~Y~C~a~N~~g~ 276 (286)
.. .. ..+ .....|.|.....+ |.|.|+|.+.|....
T Consensus 172 ~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 172 TDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp ECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred cccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 10 00 001 01234777776654 678999999998654
No 275
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.56 E-value=1.1e-13 Score=111.85 Aligned_cols=71 Identities=13% Similarity=0.300 Sum_probs=42.5
Q ss_pred CCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCCCCce---eeecCC---CeeeEEEcccCCCC-CeEEEEEEEeccc
Q psy15667 205 LPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPRFPVN---VSDLDS---FSSLLSINSVSAAH-SGEYTCVASNTAA 275 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~~~~~---~~~~~~---~~~~L~i~~v~~~d-~G~Y~C~a~N~~g 275 (286)
+.+|+.+.|.|.+....|. +.+.|+|+|..+....... +...+. ....|.|.....+| .|.|+|.|.|...
T Consensus 133 ~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 133 IANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp CSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred cccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 4567777788877644454 4899999998875432110 111111 12234555555545 6789999999753
No 276
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=7e-15 Score=103.33 Aligned_cols=82 Identities=15% Similarity=0.366 Sum_probs=67.0
Q ss_pred CCeeEecccc-ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC-CeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIE-QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN-NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~-~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+.+ +.+.+|++++|.|.+ ++|.+.+.|+|||..|..+ .++.+.. .+. ...|.|.+++.+|+|.|+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~----~~~-~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFES----IGA-KRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEE----ETT-EEEEEECSCSSSSCEEEE
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEe----cCC-EEEEEECCCCcccCEEEE
Confidence 7888888888 789999999999999 7999999999999999876 6665421 222 346999999999999999
Q ss_pred EEEEcCCEEE
Q psy15667 80 CVAENRAGTC 89 (286)
Q Consensus 80 C~a~n~~g~~ 89 (286)
|.|.+..+.+
T Consensus 89 C~a~~~~~~~ 98 (104)
T 1pd6_A 89 CVVGGEKCST 98 (104)
T ss_dssp EEETTEEECC
T ss_pred EEECCCcEEE
Confidence 9997654443
No 277
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.56 E-value=6.2e-15 Score=103.90 Aligned_cols=79 Identities=22% Similarity=0.366 Sum_probs=68.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.+.|.+ +.|+||+..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~----~~-~~~~L~I~~v~~~D~G~Y~C 80 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISH----VG-RFHKLVIDDVRPEDEGDYTF 80 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEE----ET-TEEEEEESSCCTTTCSCEEE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEE----eC-CEEEEEECCCCcCCCEEEEE
Confidence 48999999999999999999999999999888 99999999998777775431 22 23469999999999999999
Q ss_pred EEEcC
Q psy15667 81 VAENR 85 (286)
Q Consensus 81 ~a~n~ 85 (286)
.|.|.
T Consensus 81 ~a~n~ 85 (106)
T 2dlt_A 81 VPDGY 85 (106)
T ss_dssp EEETS
T ss_pred EEccC
Confidence 99996
No 278
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-15 Score=105.18 Aligned_cols=83 Identities=19% Similarity=0.334 Sum_probs=68.0
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC----eeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN----RFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~----~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
.||.|...+.++.+.+|++++|.|.+.+.| +.+.|+|||..+..+. ++.+. ..+....|.|.++..+|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~-----~~~~~~~L~I~~~~~~D~G 80 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFK-----KDGKRHILIFSDVVQEDRG 80 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEE-----ECSSEEEEECSSCCGGGCS
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEE-----ECCCEEEEEECCCChhhCE
Confidence 378899889999999999999999999999 9999999999987655 44432 1222346999999999999
Q ss_pred EEEEEEEcCCEEE
Q psy15667 77 EYACVAENRAGTC 89 (286)
Q Consensus 77 ~Y~C~a~n~~g~~ 89 (286)
.|+|.|.|....+
T Consensus 81 ~Y~C~a~n~~~~~ 93 (101)
T 2edk_A 81 RYQVITNGGQCEA 93 (101)
T ss_dssp BEEEECSSCEECC
T ss_pred EEEEEEcCCcEEE
Confidence 9999999854433
No 279
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.55 E-value=1.9e-14 Score=98.86 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=61.1
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCC--eeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDG--KPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g--~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
+.+|+.+.|.|.+. |.|.|.+.|+|++ ..+.... .+.. ......|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 14 v~~G~~~~l~C~~~-g~P~p~i~W~k~~~~~~~~~~~--~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~ 89 (93)
T 1wit_A 14 IKAGFTHNLEVDFI-GAPDPTATWTVGDSGAALAPEL--LVDA-KSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFE 89 (93)
T ss_dssp ECTTBCCEEEEEEE-CCSSCEEEEECSTTTCBCSTTS--EEEE-ETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EeCCCEEEEEEEEE-EcCCCEEEEEECCCCcccCCcE--EEEe-cCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEE
Confidence 55677777777664 6778889999998 7765432 2222 133578999999999999999999999999999999
Q ss_pred EEEC
Q psy15667 283 LQVK 286 (286)
Q Consensus 283 L~V~ 286 (286)
|.|+
T Consensus 90 l~V~ 93 (93)
T 1wit_A 90 VIVQ 93 (93)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9885
No 280
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.55 E-value=6.9e-15 Score=102.39 Aligned_cols=85 Identities=26% Similarity=0.461 Sum_probs=65.6
Q ss_pred CCeeEecc----ccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSF----IEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~----~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+ ..+.+.+|++++|.|.+.|.|.|.+.|++++..+..+.++..... . .+. ..|.|.+++.+|+|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~-~~~--~~L~i~~v~~~D~G~ 79 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKV-R-NQH--WSLIMESVVPSDKGN 79 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEE-E-GGG--TEEEECSCCGGGCEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEE-e-cCe--EEEEEccCCcCCCEE
Confidence 67887554 345788999999999999999999999999999875443211011 1 111 248899999999999
Q ss_pred EEEEEEcCCEEEE
Q psy15667 78 YACVAENRAGTCE 90 (286)
Q Consensus 78 Y~C~a~n~~g~~~ 90 (286)
|+|.|.|..|...
T Consensus 80 Y~C~a~N~~g~~~ 92 (100)
T 3caf_A 80 YTCVVENEYGSIN 92 (100)
T ss_dssp EEEEEEETTEEEE
T ss_pred EEEEEEeCCCEEE
Confidence 9999999998764
No 281
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.55 E-value=5.8e-14 Score=97.13 Aligned_cols=81 Identities=17% Similarity=0.319 Sum_probs=65.1
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+....|.+.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 13 v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 91 (97)
T 2bk8_A 13 GEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYE-DGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELF 91 (97)
T ss_dssp ECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEc-CCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEE
Confidence 566777777777653347889999999998877666655432 2345899999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 92 V~ 93 (97)
T 2bk8_A 92 VK 93 (97)
T ss_dssp ET
T ss_pred EE
Confidence 85
No 282
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.55 E-value=1.7e-13 Score=111.65 Aligned_cols=77 Identities=21% Similarity=0.332 Sum_probs=44.8
Q ss_pred CCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCCceeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 207 EGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
.|+.+.|.|.+....| +..+.|+++|..+...........+ .....|.|.....+| |.|+|.+.|..+.......
T Consensus 155 ~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~ 233 (248)
T 3u2s_H 155 SGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKK 233 (248)
T ss_dssp --CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEE
T ss_pred CCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEE
Confidence 4555666665554334 4567788877543110000000000 113468888888888 9999999999887766665
Q ss_pred EE
Q psy15667 283 LQ 284 (286)
Q Consensus 283 L~ 284 (286)
|.
T Consensus 234 l~ 235 (248)
T 3u2s_H 234 VE 235 (248)
T ss_dssp CC
T ss_pred Ec
Confidence 54
No 283
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.54 E-value=1.6e-14 Score=99.61 Aligned_cols=83 Identities=13% Similarity=0.285 Sum_probs=67.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+.++.+.+|++++|.|.+ +.|.+.+.|+||+..|..+.++.+.. .+. ...|.|.+++.+|+|.|+|.
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~----~~~-~~~L~I~~v~~~D~G~Y~C~ 81 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLAT----EGT-RHTLTVREVGPADQGSYAVI 81 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEE----ETT-EEEEEESSCCTTCCSEEEEE
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEE----cCC-EEEEEEcCCCcccCEEEEEE
Confidence 4678888888999999999999999 88999999999999998777765422 222 34699999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.+....+.
T Consensus 82 ag~~~~~~~ 90 (95)
T 2k1m_A 82 AGSSKVKFD 90 (95)
T ss_dssp ETTEEEEEE
T ss_pred ECCceEEEE
Confidence 966444443
No 284
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.54 E-value=4.5e-13 Score=107.71 Aligned_cols=34 Identities=15% Similarity=0.383 Sum_probs=28.9
Q ss_pred eeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 251 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 251 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
..|.|.....+| |.|+|.+.|..+.......|.|
T Consensus 190 s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v 223 (230)
T 3n9g_H 190 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 223 (230)
T ss_dssp EEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECHHHcCC-CeEEEEEEECCCCcceEEEccC
Confidence 478899999999 9999999999987777766654
No 285
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=99.52 Aligned_cols=80 Identities=24% Similarity=0.423 Sum_probs=58.1
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.+.+.|+|++..+.................|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 18 ~~G~~v~l~C~~~-g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 18 REGQDVIMSIRVQ-GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp ETTCCEEEEEEEE-EESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEE-EcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeEEEEEEE
Confidence 3455555555543 455677889999988865543322222222347999999999999999999999999999999987
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
+
T Consensus 97 ~ 97 (99)
T 1u2h_A 97 R 97 (99)
T ss_dssp E
T ss_pred E
Confidence 4
No 286
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=99.05 Aligned_cols=80 Identities=26% Similarity=0.397 Sum_probs=59.6
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.+.+.|+|+|..+.......+.........|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 18 ~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 96 (100)
T 2kdg_A 18 DEGRFCRMDFKVS-GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96 (100)
T ss_dssp ETTCCEEEEEECE-EESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEE-eeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEE
Confidence 4455555555543 456678889999988866544443333333458999999999999999999999999999999987
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
.
T Consensus 97 ~ 97 (100)
T 2kdg_A 97 L 97 (100)
T ss_dssp E
T ss_pred E
Confidence 3
No 287
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.54 E-value=3.2e-14 Score=99.53 Aligned_cols=79 Identities=27% Similarity=0.410 Sum_probs=59.7
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.|.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 21 ~~G~~v~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 98 (103)
T 3qp3_A 21 PCGQNTRFILNVQ-SKPTAEVKWYHNGVELQESSKIHYTNT-SGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDV 98 (103)
T ss_dssp ETTCCEEEEEEEE-EESCCEEEEEETTEECCCCSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEE-ecCCCEEEEEECCEECCCCCCEEEEEC-CCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 3444555555443 456677889999988876666555432 23467999999999999999999999999999999987
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
+
T Consensus 99 ~ 99 (103)
T 3qp3_A 99 T 99 (103)
T ss_dssp E
T ss_pred E
Confidence 4
No 288
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.54 E-value=1.2e-13 Score=113.26 Aligned_cols=133 Identities=16% Similarity=0.279 Sum_probs=90.4
Q ss_pred eEEEeeCCccCcCCC--CcceEEEccC---CCCCCee--EEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCE
Q psy15667 100 LIAWFKDGRQIPGRT--SSTSLVINPV---GREDRGI--YQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGL 172 (286)
Q Consensus 100 ~~~W~~~g~~l~~~~--~~~~l~i~~v---~~~d~G~--Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~ 172 (286)
.+.|+|||..+.... ....+.+..+ ..+|+|. |+|.+.|..|.. ...+.|.|...|.
T Consensus 37 ~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~-~~~~~l~V~~~p~--------------- 100 (265)
T 2oz4_A 37 QVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ-ETLQTVTIYSFPA--------------- 100 (265)
T ss_dssp EEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEE-EEEEEEEEECCCC---------------
T ss_pred EEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCc-EEEEEEEEeCCCC---------------
Confidence 899999999886421 2335666555 7888885 999999988764 3466777754321
Q ss_pred EEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeee
Q psy15667 173 SIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSL 252 (286)
Q Consensus 173 ~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~ 252 (286)
|.+. .....+.+|+.+.|.|.+. |.+.+.| +|..+... .....
T Consensus 101 -----------p~~~------------~~~~~v~~G~~v~l~C~~~---p~~~i~W--~g~~~~~~---------~~~~~ 143 (265)
T 2oz4_A 101 -----------PNVI------------LTKPEVSEGTEVTVKCEAH---PRAKVTL--NGVPAQPL---------GPRAQ 143 (265)
T ss_dssp -----------CEEE------------ESCSEEETTCEEEEEEECC---TTSEEEE--SSCSSSCC---------SSEEC
T ss_pred -----------ceee------------cCCceecCCCcEEEEEEcc---CCCEEEE--CCEEccCC---------CCcEE
Confidence 0110 0012245678888888765 7788999 77766321 12457
Q ss_pred EEEcccCCCCCeEEEEEEEecc-ccee---eEEEEEE
Q psy15667 253 LSINSVSAAHSGEYTCVASNTA-AQAR---YSSKLQV 285 (286)
Q Consensus 253 L~i~~v~~~d~G~Y~C~a~N~~-g~~~---~~~~L~V 285 (286)
|.|..+..+|+|.|+|.|.|.. |... .++.|.|
T Consensus 144 l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V 180 (265)
T 2oz4_A 144 LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV 180 (265)
T ss_dssp CEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEE
T ss_pred EEEccccccCCceEEEEEEcCCCCCcccccccEEEEE
Confidence 8899999999999999998655 7665 5566655
No 289
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.54 E-value=3e-14 Score=121.57 Aligned_cols=166 Identities=18% Similarity=0.286 Sum_probs=98.7
Q ss_pred cccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeC--CccC-------------------cCC--------CCcceEE
Q psy15667 70 VTVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKD--GRQI-------------------PGR--------TSSTSLV 120 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~--g~~l-------------------~~~--------~~~~~l~ 120 (286)
+...++-...|.+.... .+.+.+.|||+ |..+ ..+ .....|.
T Consensus 12 v~~G~~v~L~C~~~~~~---------~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (344)
T 1za6_B 12 VKPGASVKISCKASGYT---------FTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVE 82 (344)
T ss_dssp ECTTCCEEEEEEEESSC---------TTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred EeCCCcEEEEEEcCCcc---------ccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEE
Confidence 34556677888876521 12357999986 4332 111 1124799
Q ss_pred EccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccccccc
Q psy15667 121 INPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAF 200 (286)
Q Consensus 121 i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~ 200 (286)
|.++..+|+|.|+|.+.|..+.. .....|.|...+. ..|.+.- . .
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~------------------------~~P~i~~-~---------~ 127 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYW-GQGTLVTVSSAST------------------------KGPSVFP-L---------A 127 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEE-CCCEEEEECSSCC------------------------BCCEEEE-E---------C
T ss_pred ECCCCcccCEEEEEEEecCccee-cCcEEEEEecCCC------------------------CCCeEEE-c---------c
Confidence 99999999999999999854322 2345666642110 0001100 0 0
Q ss_pred ccCCCCCCCeEEEEEeeecCCCC-CeEEEEeCCeeCCCC-CCceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 201 PFDGLPEGARTRVICGVTHGDPP-LTIRWLKDGKPLSPR-FPVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 201 ~~~~~~~g~~~~l~c~~~~~~p~-~~~~W~~~g~~~~~~-~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
+...+.+|+.+.|.|.+....|. +.+.|+|+|..+... ......... .....|.|.++..+| |.|+|.|.|..|.
T Consensus 128 ~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 128 PSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp CSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred ccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 11235678888888887654454 789999988754210 000000000 013478999998888 9999999999987
Q ss_pred eeeE
Q psy15667 277 ARYS 280 (286)
Q Consensus 277 ~~~~ 280 (286)
....
T Consensus 207 ~~~~ 210 (344)
T 1za6_B 207 TKVD 210 (344)
T ss_dssp EEEE
T ss_pred ccce
Confidence 5433
No 290
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=2.9e-14 Score=95.91 Aligned_cols=75 Identities=23% Similarity=0.441 Sum_probs=59.8
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. + |.|.+.|+|||..+..+.++.+.... ....|.|.++..+|+|.|+|.|.| .+.++.|.
T Consensus 8 ~~~G~~v~l~C~vs-~-p~p~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l~ 80 (84)
T 2lu7_A 8 STPGGDLELVVHLS-G-PGGPVRWYKDGERLASQGRVQLEQAG-ARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLVS 80 (84)
T ss_dssp ECTTSCEEEECCCS-C-CSTTCEEEETTEECCCCSSEEEEECS-SCEEEEESSCSSTTCEEEEEECTT----TCEEEEEE
T ss_pred EecCCCEEEEEEEC-C-CCcEEEEEECCEEccccccEEEeecC-CeEEEEecCCCCcccEEEEEEECC----EEEEEEEE
Confidence 56788888888873 4 77789999999999888777765543 356899999999999999999865 45667787
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 81 V~ 82 (84)
T 2lu7_A 81 VE 82 (84)
T ss_dssp EC
T ss_pred EE
Confidence 74
No 291
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.54 E-value=3.2e-14 Score=99.08 Aligned_cols=85 Identities=15% Similarity=0.323 Sum_probs=67.9
Q ss_pred CCCeeEecccc-ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIE-QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~-~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.+ ..+.+|++++|.|.+. .|.|.+.|+|||..|..+.++.+.. .+ ....|.|.+++.+|+|.|+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEH----KG-CQRILFINNCQMTDDSEYY 79 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEE----ET-TEEEEEEEEECTTTCCEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEe----cC-CEEEEEEcCCCcCcCEEEE
Confidence 37999988887 5789999999999998 7999999999999998777765431 22 2346999999999999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.+....+.+
T Consensus 80 C~ag~~~~~~~l 91 (100)
T 2yuv_A 80 VTAGDEKCSTEL 91 (100)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCceEEEEE
Confidence 999554444443
No 292
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=4.6e-14 Score=99.99 Aligned_cols=83 Identities=18% Similarity=0.230 Sum_probs=66.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC----------eeEeceEEecccceeEEEEEcccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN----------RFVIGQFVSGHGDVISHVNISHVT 71 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~l~I~~~~ 71 (286)
||.|...+.++.+.+|+.++|.|.+.+ .|.+.|+|||++|..+. ++.+.+ ++..+.|.|.+++
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~-----~g~~~~L~I~~v~ 80 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQ-----KGLQHRLILHAVK 80 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECC-----BTTEEEEEEESCC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEe-----CCcEEEEEECCCC
Confidence 678999999999999999999999997 67899999999998776 776532 2334579999999
Q ss_pred cCCCeEEEE-EEEcCCEEEEE
Q psy15667 72 VEDGGEYAC-VAENRAGTCEI 91 (286)
Q Consensus 72 ~~D~G~Y~C-~a~n~~g~~~~ 91 (286)
.+|+|.|+| .+.+....+.+
T Consensus 81 ~~D~G~Y~~~~~~~~~ssA~L 101 (112)
T 2e6q_A 81 HQDSGALVGFSCPGVQDSAAL 101 (112)
T ss_dssp STTCSEEEEEEETTEEEEEEE
T ss_pred HHHCccEEEEEECCeeEEEEE
Confidence 999999977 44443333333
No 293
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=1.7e-14 Score=103.62 Aligned_cols=83 Identities=29% Similarity=0.583 Sum_probs=70.1
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
.||.|...+.++.+.+|++++|.|.+.|.|.+.+.|++|+..+.. +.++.+. .++ .|.|.+++.+|+|.|+
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~----~~~----~L~i~~v~~~D~G~Y~ 78 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQL----ENG----VLQIRYAKLGDTGRYT 78 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEE----ETT----EEEEESCCGGGCCCEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEc----cCC----EEEEccCCcCCCEEEE
Confidence 489999999999999999999999999999999999999998864 4454321 122 4889999999999999
Q ss_pred EEEEcCCEEEEE
Q psy15667 80 CVAENRAGTCEI 91 (286)
Q Consensus 80 C~a~n~~g~~~~ 91 (286)
|.|.|..|....
T Consensus 79 C~a~n~~g~~~~ 90 (118)
T 2eo9_A 79 CIASTPSGEATW 90 (118)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEcCCCcEEE
Confidence 999999987653
No 294
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=6.2e-14 Score=100.07 Aligned_cols=79 Identities=25% Similarity=0.370 Sum_probs=62.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 19 v~~G~~v~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 96 (114)
T 2cqv_A 19 VRAGESVELFGKVT-GTQPITCTWMKFRKQIQESEHMKVENS-ENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLT 96 (114)
T ss_dssp EETTCCEEEEEEEE-SSSSCEEEEEESSSBCCCSSSEEEEEC-SSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEE
T ss_pred EeCCCeEEEEEEEE-cCCCCEEEEEECCEECcCCCCEEEEEc-CCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEE
Confidence 44566666666654 567788899999998876666655432 3356899999999999999999999999999999888
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 97 V 97 (114)
T 2cqv_A 97 V 97 (114)
T ss_dssp E
T ss_pred E
Confidence 7
No 295
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.53 E-value=4.8e-14 Score=98.83 Aligned_cols=80 Identities=15% Similarity=0.287 Sum_probs=63.3
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCcee--eecC--CCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNV--SDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~--~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
..+..+.|.|.+. |.|.|.+.|+|+|..+........ .... ...+.|.|.++..+|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~~~~c~v~-G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 14 TSDHHWCIPFTVK-GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCEEEEEEEEE-CSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eECcEEEEEEEEE-EeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 4567788899874 889999999999998876644212 1111 1245699999999999999999999999999999
Q ss_pred EEEEC
Q psy15667 282 KLQVK 286 (286)
Q Consensus 282 ~L~V~ 286 (286)
.|.|.
T Consensus 93 ~l~V~ 97 (103)
T 1wwb_X 93 SAHFM 97 (103)
T ss_dssp EECCS
T ss_pred EEEEC
Confidence 98763
No 296
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.52 E-value=1.3e-14 Score=102.42 Aligned_cols=82 Identities=33% Similarity=0.572 Sum_probs=61.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.|.|.|.+.|++++..+..+.++... .++ ..|.|.+++.+|+|.|+|.
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~-----~~~--~~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK-----DGN--RNLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE-----TTT--TEEEECSCCGGGCEEEEEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe-----CCC--cEEEEeecCcccCEEEEEE
Confidence 788888888999999999999999999999999999999988765554321 111 2489999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 83 a~n~~g~~~ 91 (108)
T 3kvq_A 83 ACSVLGCAK 91 (108)
T ss_dssp EC----CEE
T ss_pred EEeCCCceE
Confidence 999887654
No 297
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.52 E-value=9.4e-14 Score=98.17 Aligned_cols=90 Identities=10% Similarity=0.178 Sum_probs=66.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCC---CeeEEeeCCEE-cC--CCCeeEeceEEec-ccceeEEEEEcccccCC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPT---PDIGWTLDGFE-LP--TNNRFVIGQFVSG-HGDVISHVNISHVTVED 74 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~---p~v~W~~~~~~-l~--~~~~~~~~~~~~~-~~~~~~~l~I~~~~~~D 74 (286)
.|.|...+.++++.+|++++|.|.+.|.|. |.|.|+|++.. +. ...++.+...... .......|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 578888898999999999999999999998 99999998732 21 1234433211111 11123469999999999
Q ss_pred CeEEEEEEEcCCEEEEE
Q psy15667 75 GGEYACVAENRAGTCEI 91 (286)
Q Consensus 75 ~G~Y~C~a~n~~g~~~~ 91 (286)
+|.|+|.|.|..|..+.
T Consensus 84 ~G~Y~C~a~N~~G~~~~ 100 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCS 100 (108)
T ss_dssp CEEEEEEEECSSCEEEE
T ss_pred CEEEEEEEecCCCceEE
Confidence 99999999999987653
No 298
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=104.34 Aligned_cols=87 Identities=15% Similarity=0.243 Sum_probs=69.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|+.|...+.++++.+|++++|.|.+.|.|.|.+.|+|||..|..+.++.+.. ..+....|.|.+++.+|+|.|+|.
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~----~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDA----QPGGYHVLTLRQLALKDSGTIYFE 88 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCC----BTTTBCCBEECSCCTTTCEEEEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEE----cCCCEEEEEEcCCChhhCEEEEEE
Confidence 5578888888999999999999999999999999999999998777664421 111223589999999999999999
Q ss_pred EEcCCEEEEEe
Q psy15667 82 AENRAGTCEIT 92 (286)
Q Consensus 82 a~n~~g~~~~~ 92 (286)
+.+....+.+.
T Consensus 89 ~g~~~~~~~L~ 99 (115)
T 2cr6_A 89 AGDQRASAALR 99 (115)
T ss_dssp ETTEECCEEEE
T ss_pred ECCeeEEEEEE
Confidence 76654444443
No 299
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.52 E-value=7.1e-14 Score=110.71 Aligned_cols=83 Identities=19% Similarity=0.279 Sum_probs=68.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+ +..+.+|+++.|.|.+.|. |.|.++|+|||.+|..+.++.. .+....|.|.+++.+|+|.|+|
T Consensus 117 ~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~-------~~~~~~L~I~~v~~~D~G~Y~C 188 (207)
T 3rbs_A 117 GPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF-------KDGICTLLITEFSKKDAGIYEV 188 (207)
T ss_dssp SSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCC-------SSEEEEEEETTCCGGGCEEEEE
T ss_pred CCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEc-------CCCEEEEEECCCCcccCEEEEE
Confidence 67777655 5788999999999999999 9999999999999977665422 1122359999999999999999
Q ss_pred EEEcCCEEEEEe
Q psy15667 81 VAENRAGTCEIT 92 (286)
Q Consensus 81 ~a~n~~g~~~~~ 92 (286)
.|.|..|.....
T Consensus 189 ~a~N~~G~~~~~ 200 (207)
T 3rbs_A 189 ILKDDRGKDKSR 200 (207)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEcCCCEEEEE
Confidence 999999987654
No 300
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=3.1e-14 Score=105.25 Aligned_cols=110 Identities=20% Similarity=0.326 Sum_probs=64.0
Q ss_pred ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC-CCCCCc
Q psy15667 163 KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL-SPRFPV 241 (286)
Q Consensus 163 ~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~-~~~~~~ 241 (286)
.+.+..|+++.|.|.+.|.|.|.|.|.+......... .....+. .........|..+...+ ....++
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~---~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~r~ 94 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAP---ARPAPDA---------PEDTGDSDEWVFDKKLLCETEGRV 94 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSC---CCCCCCC---------CCCCCCSSCCCCSCCCCCSCSSSC
T ss_pred CEEEeCCCeEEEEEEEEEcCCCeEEEEECCccccccc---ccccccc---------cccccccccccccceeecCCCCeE
Confidence 4566677777777777777777777766542110000 0000000 00000111222222333 223344
Q ss_pred eeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 242 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+... .....|.|.++..+|+|.|+|.|.|.+|....++.|.|
T Consensus 95 ~i~~~-~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 95 RVETT-KDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EEEEE-TTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEeC-CCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 44332 22467999999999999999999999999999999987
No 301
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.51 E-value=2.4e-14 Score=105.72 Aligned_cols=87 Identities=28% Similarity=0.423 Sum_probs=68.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC----------CeeEeceEEecccceeEEEEEcccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN----------NRFVIGQFVSGHGDVISHVNISHVT 71 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~I~~~~ 71 (286)
||.|...+.++++.+|++++|.|.+.|.|.|.+.|++++..+... .++.+.... .......|.|.+++
T Consensus 21 pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 21 MAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATY--HQHAASTISIDTLV 98 (137)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEE--SSSEEEEEEECSCC
T ss_pred CCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEeccc--ccccceEEEECCCC
Confidence 899999999999999999999999999999999999988765321 222221111 11122469999999
Q ss_pred cCCCeEEEEEEEcCCEEEE
Q psy15667 72 VEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 72 ~~D~G~Y~C~a~n~~g~~~ 90 (286)
.+|+|.|+|.|.|..|...
T Consensus 99 ~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 99 EEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp GGGCEEEEEEEECCTTSSS
T ss_pred cccCEEEEEEEEecCCccc
Confidence 9999999999999877653
No 302
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.51 E-value=8e-14 Score=96.65 Aligned_cols=79 Identities=29% Similarity=0.441 Sum_probs=60.0
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. +.|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 19 ~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 96 (99)
T 3puc_A 19 SSDSVAKFAVKAT-GEPRPTAIWTKDGKAITQGGKYKLSED-KGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTI 96 (99)
T ss_dssp ESSSCEEEEEEEE-EESCCEEEEEETTEECCSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEE-ecCCCEEEEEECCEECcCCCCEEEEEe-CCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEE
Confidence 3455555555543 455678889999988876666655433 23457999999999999999999999999999999987
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
+
T Consensus 97 ~ 97 (99)
T 3puc_A 97 K 97 (99)
T ss_dssp E
T ss_pred E
Confidence 4
No 303
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.51 E-value=2.2e-14 Score=101.40 Aligned_cols=85 Identities=22% Similarity=0.457 Sum_probs=69.2
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.+. |.+.|+|++..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~----~~-~~~~L~I~~v~~~D~G~Y~C 79 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQ----DG-TRCELQIHDLSVADAGEYSC 79 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEE----ET-TEEEEEESSCCTTTCSEEEE
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEe----cC-CEEEEEECCCCcccCEEEEE
Confidence 38999988989999999999999999876 6899999999988777775432 22 23469999999999999999
Q ss_pred EEEcCCEEEEEe
Q psy15667 81 VAENRAGTCEIT 92 (286)
Q Consensus 81 ~a~n~~g~~~~~ 92 (286)
.|.|....+.+.
T Consensus 80 ~a~n~~~~~~l~ 91 (108)
T 2dm7_A 80 MCGQERTSATLT 91 (108)
T ss_dssp EETTEEEEEECE
T ss_pred EEcCCEEEEEEE
Confidence 998866555544
No 304
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.51 E-value=5.4e-14 Score=96.11 Aligned_cols=74 Identities=19% Similarity=0.323 Sum_probs=58.6
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. .|.+.+.|+|||+.+..+.++.+...+ ....|.|.++..+|+|.|+|.|.|. +.++.|+
T Consensus 18 ~~~g~~v~l~C~v~--~p~~~v~W~k~g~~i~~~~~~~i~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~lt 90 (91)
T 2lvc_A 18 AITSECVMLACEVD--REDAPVRWYKDGQEVEESDFVVLENEG-PHRRLVLPATQPSDGGEFQCVAGDE----CAYFTVT 90 (91)
T ss_dssp CCTTCCEEEEEECS--CTTSCCEEEETTSCCCCCSSCEEEEET-TEEEEEESSCCGGGCSEEEEECSSC----EEEEEEE
T ss_pred EECCCcEEEEEEEC--CCCcEEEEEECCEEeeeeeeeeEEecC-CeEEEEeCCCChhhcEEEEEEEcce----EEEEEEE
Confidence 45788888888874 367789999999999888777766543 3568999999999999999999775 4556666
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 91 V 91 (91)
T 2lvc_A 91 I 91 (91)
T ss_dssp C
T ss_pred C
Confidence 5
No 305
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=2.8e-14 Score=105.51 Aligned_cols=78 Identities=23% Similarity=0.312 Sum_probs=61.7
Q ss_pred cccccccCCCcEEEEEEeecCCCCeeEEeeCC----------------------------EEc-CCCCeeEeceEEeccc
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG----------------------------FEL-PTNNRFVIGQFVSGHG 59 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~----------------------------~~l-~~~~~~~~~~~~~~~~ 59 (286)
+.++++.+|++++|.|.+.|.|.|.|+|+|++ ..| ....++.+.. .+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~----~~ 100 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVET----TK 100 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEE----ET
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEe----CC
Confidence 45678999999999999999999999999998 444 2334544321 12
Q ss_pred ceeEEEEEcccccCCCeEEEEEEEcCCEEEEE
Q psy15667 60 DVISHVNISHVTVEDGGEYACVAENRAGTCEI 91 (286)
Q Consensus 60 ~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~~ 91 (286)
. ...|.|.++..+|+|.|+|.|.|..|....
T Consensus 101 ~-~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~ 131 (139)
T 1gxe_A 101 D-RSIFTVEGAEKEDEGVYTVTVKNPVGEDQV 131 (139)
T ss_dssp T-EEEEECSCCCTTTCEEEEEEEECSSCEEEE
T ss_pred C-EEEEEECCCCcccCEEEEEEEEeCCceEEE
Confidence 2 245999999999999999999999997654
No 306
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.50 E-value=6.2e-13 Score=124.61 Aligned_cols=221 Identities=16% Similarity=0.163 Sum_probs=122.7
Q ss_pred cCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE-------
Q psy15667 15 QPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG------- 87 (286)
Q Consensus 15 ~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g------- 87 (286)
..+.++.|.|.+.|+|.|.+.|.++|..+..-.+..+. +.........+.+..+...|.|.|.|.......
T Consensus 89 ~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~--i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p 166 (731)
T 2v5y_A 89 SPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELA--ISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTP 166 (731)
T ss_dssp SCSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEE--ECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSC
T ss_pred CCcceEEEEEecCCCCccceeEEEeCCcCCceeEEEEE--EeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccc
Confidence 44568999999999999999999999776432111100 000000001233444444455544443211000
Q ss_pred ----------------EEEEecCCCCCeeEE-Ee--eCCccCcCC--------CCcceEEEccCCCCCCeeEEEEEEcCC
Q psy15667 88 ----------------TCEITPYDSGPYLIA-WF--KDGRQIPGR--------TSSTSLVINPVGREDRGIYQCIARRSD 140 (286)
Q Consensus 88 ----------------~~~~~~~~~~~~~~~-W~--~~g~~l~~~--------~~~~~l~i~~v~~~d~G~Y~C~a~~~~ 140 (286)
...+...+.+++.+. |+ +||+.+... ...+.|.|.++.++|+|.|+|.|.|..
T Consensus 167 ~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~ 246 (731)
T 2v5y_A 167 HFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEG 246 (731)
T ss_dssp EECCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETT
T ss_pred ccccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCC
Confidence 001111122334555 88 788776321 113689999999999999999999999
Q ss_pred cceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecC
Q psy15667 141 GDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHG 220 (286)
Q Consensus 141 g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~ 220 (286)
|...+..+.|.|..+|.....+.........+.|.|...... .+
T Consensus 247 G~~~s~~~~l~V~~~P~~~~~p~~~~~~~~~v~l~w~~~~~~------------------------------------g~ 290 (731)
T 2v5y_A 247 GVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSIN------------------------------------GD 290 (731)
T ss_dssp EEEECCCEEEEEECCCCBSSCCEEEEECSSCEEEECCCSSBS------------------------------------SC
T ss_pred CCcceeeEEEEEecCCCCCCCcceeccCCceEEEEeCCcccC------------------------------------CC
Confidence 873345677888766654433433333333444444321100 00
Q ss_pred CCC--CeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEE--ecccceeeE
Q psy15667 221 DPP--LTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVAS--NTAAQARYS 280 (286)
Q Consensus 221 ~p~--~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~--N~~g~~~~~ 280 (286)
.+. ..+.|.+.+.. ...+.. .....+.|.++.+.+...|.|.|. |..|....+
T Consensus 291 ~~i~~Y~v~~~~~~~~-----~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S 347 (731)
T 2v5y_A 291 GPIVAREVEYCTASGS-----WNDRQP--VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPG 347 (731)
T ss_dssp SCCCEEEEEEEESSSS-----CEEEEE--CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBC
T ss_pred CccEEEEEEEEECCCC-----ceEEec--cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCC
Confidence 111 13445443211 111111 113578899999999999999999 999876533
No 307
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=5.1e-14 Score=98.10 Aligned_cols=76 Identities=17% Similarity=0.314 Sum_probs=61.4
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+ .|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|. ....++.|
T Consensus 18 ~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~~~~r~~i~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L 91 (100)
T 2yuz_A 18 TVNLGKEICLKCEI---SENIPGKWTKNGLPVQESDRLKVVQK-GRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKV 91 (100)
T ss_dssp EEETTSCCCEEEEC---SSCCCEEEEETTEECCCCSSEEEEEC-SSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEE
T ss_pred EEcCCCCEEEEEEe---CCCCeEEEEECCEECCCCCcEEEEEe-CCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEE
Confidence 35678888888877 57788999999999987777766543 23468999999999999999999998 55677777
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 92 ~V 93 (100)
T 2yuz_A 92 HV 93 (100)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 308
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.50 E-value=3.7e-14 Score=112.00 Aligned_cols=84 Identities=15% Similarity=0.220 Sum_probs=64.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcC----CCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELP----TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~----~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+.+..+.+|++++|.|.+.|.|.|.|+|++++..+. .+.++.+ ..++ ....|.|.++..+|+|.
T Consensus 106 p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~----~~~g-~l~il~i~~v~~~D~G~ 180 (203)
T 4fa8_A 106 PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMK----EKDG-SLSVAVDLSLPKPWHLP 180 (203)
T ss_dssp EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEE----CTTS-CEEEEEEEEECSSCCCC
T ss_pred CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEE----eCCC-CEEEEEECCCCHHHCEE
Confidence 7888888888999999999999999999999999998776543 2344433 2233 33457788999999999
Q ss_pred EEEEEEcCCEEEE
Q psy15667 78 YACVAENRAGTCE 90 (286)
Q Consensus 78 Y~C~a~n~~g~~~ 90 (286)
|+|.|.|..|+++
T Consensus 181 YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 181 VTCVGKNDKEEAH 193 (203)
T ss_dssp EEEEEESSSCEEE
T ss_pred EEEEEEcCCCEEE
Confidence 9999999999875
No 309
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.50 E-value=2.6e-14 Score=100.10 Aligned_cols=80 Identities=19% Similarity=0.482 Sum_probs=66.6
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.||.|...+.++.+.+|++++|.|.+.+.|.+ +.|++++..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~----~~-~~~~L~I~~v~~~D~G~Y~C 80 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQ----EG-AMLELVVRNLRPQDSGRYSC 80 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEE----CS-SEEEEEECSCCTTTCCCEEE
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEE----cC-CEEEEEEccCCcccCEEEEE
Confidence 37889888999999999999999999999999 99999999987777775432 22 23469999999999999999
Q ss_pred EEEcCC
Q psy15667 81 VAENRA 86 (286)
Q Consensus 81 ~a~n~~ 86 (286)
.+.+..
T Consensus 81 ~~g~~~ 86 (103)
T 2e7b_A 81 SFGDQT 86 (103)
T ss_dssp ECSSCB
T ss_pred EECCcE
Confidence 855543
No 310
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.50 E-value=1.3e-13 Score=98.15 Aligned_cols=84 Identities=23% Similarity=0.395 Sum_probs=68.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|.+.+. |.+.|+||+..|..+.++.+.. ++. ...|.|.+++.+|+|.|+|.
T Consensus 19 pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~----~~~-~~~L~I~~v~~~D~G~Y~C~ 91 (113)
T 2edh_A 19 PIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQ----DGA-RCELQIRGLVAEDAGEYLCM 91 (113)
T ss_dssp CCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEE----ETT-EEEEEECSCCSTTCEEEEEE
T ss_pred CCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEE----CCC-EEEEEECCCChhhCEEEEEE
Confidence 6789888999999999999999999775 6899999999998777776532 222 34699999999999999999
Q ss_pred EEcCCEEEEEe
Q psy15667 82 AENRAGTCEIT 92 (286)
Q Consensus 82 a~n~~g~~~~~ 92 (286)
|.+....+.+.
T Consensus 92 a~~~~~~~~l~ 102 (113)
T 2edh_A 92 CGKERTSAMLT 102 (113)
T ss_dssp ETTEEEEEEEE
T ss_pred eCCCCEEEEEE
Confidence 96655555554
No 311
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=5.8e-13 Score=105.41 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=28.2
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG 40 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~ 40 (286)
+...+..+++.+|++++|.|.+.+.+ +.+.|+|+.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~ 38 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQN 38 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEEC
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeC
Confidence 44556778899999999999998754 489999853
No 312
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=4.3e-14 Score=98.30 Aligned_cols=80 Identities=28% Similarity=0.502 Sum_probs=58.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....+............|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 20 v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 98 (100)
T 3caf_A 20 VPAANTVKFRCPAG-GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98 (100)
T ss_dssp ECTTCCEEEECCEE-EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCCEEEEEEEcc-ccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEE
Confidence 45566666666653 55677788999998876543221111111235799999999999999999999999999999988
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 99 V 99 (100)
T 3caf_A 99 V 99 (100)
T ss_dssp E
T ss_pred E
Confidence 7
No 313
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=98.27 Aligned_cols=77 Identities=21% Similarity=0.428 Sum_probs=57.2
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.|.+.|+|+|..+. ..++.+.. ......|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 37 ~~G~~~~l~C~~~-g~P~p~i~W~k~g~~l~-~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V 113 (118)
T 2e7c_A 37 KVGEQLNLVVPFQ-GKPRPQVVWTKGGAPLD-TSRVHVRT-SDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRV 113 (118)
T ss_dssp ESSSCEEEEEEEE-EESCCEEEEEETTEECC-CSSCEEEE-CSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEE
T ss_pred ECCCEEEEEEEEc-cCCCCEEEEEECCEECC-CCcEEEEE-CCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEE
Confidence 3455555555443 45667788899998886 33444432 233567999999999999999999999999999999887
No 314
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.49 E-value=1.5e-13 Score=94.67 Aligned_cols=76 Identities=22% Similarity=0.397 Sum_probs=62.1
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+. |.| +.+.|+|+|..+....++.+. ...|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 20 ~v~~G~~v~l~C~~~-g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 92 (95)
T 2ckn_A 20 LVHPGDLLQLRCRLR-DDV-QSINWLRDGVQLVESNRTRIT-----GEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92 (95)
T ss_dssp EECTTSCEEEECCEE-SSC-CEEEEEBTTBCCCCCSSEEEC-----SSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEE
T ss_pred EEcCCCeEEEEEECC-CCC-CceEEEECCEecCCCCCEEEe-----CCEEEECCCChHHCEEEEEEeccCCCcEEEEEEE
Confidence 356788888888775 445 699999999988766554432 4589999999999999999999999999999999
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 93 ~V~ 95 (95)
T 2ckn_A 93 NVS 95 (95)
T ss_dssp EEC
T ss_pred EEC
Confidence 873
No 315
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=97.79 Aligned_cols=81 Identities=21% Similarity=0.350 Sum_probs=60.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC-CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP-RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|++..+.. ..++.+.........|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 27 v~~G~~v~L~C~~~-g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 105 (116)
T 2kkq_A 27 VLEGDSVKLECQIS-AIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRL 105 (116)
T ss_dssp EETTEEEEEEEEBC-CBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EeCCCcEEEEEEEe-ccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEE
Confidence 34555555666543 566778899999988864 3445444333334489999999999999999999999999999998
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 106 ~V~ 108 (116)
T 2kkq_A 106 DVT 108 (116)
T ss_dssp EEE
T ss_pred EEe
Confidence 873
No 316
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=9.3e-14 Score=100.25 Aligned_cols=89 Identities=12% Similarity=0.203 Sum_probs=65.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC---CCCeeEEeeCCE-EcC--CCCeeEeceEEecc-cceeEEEEEcccccCCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN---PTPDIGWTLDGF-ELP--TNNRFVIGQFVSGH-GDVISHVNISHVTVEDG 75 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~---p~p~v~W~~~~~-~l~--~~~~~~~~~~~~~~-~~~~~~l~I~~~~~~D~ 75 (286)
|.|...+.++.+.+|++++|.|.+.|. |.|.|.|+|+.. .+. ...++.+....... ......|.|.+++.+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 568888999999999999999999875 899999999742 111 13444332111111 11134699999999999
Q ss_pred eEEEEEEEcCCEEEEE
Q psy15667 76 GEYACVAENRAGTCEI 91 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~~ 91 (286)
|.|+|+|.|..|..+.
T Consensus 88 G~Y~Cevsn~~g~~~~ 103 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSC 103 (126)
T ss_dssp EEEEEEEECSSCEEEE
T ss_pred EEEEEEEEeCCCcEEE
Confidence 9999999999876554
No 317
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.49 E-value=2.5e-14 Score=103.44 Aligned_cols=88 Identities=28% Similarity=0.482 Sum_probs=71.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCe-eEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCC-eE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPD-IGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDG-GE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~-v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~-G~ 77 (286)
||.|.. +..+.+.+|+.+.|.|.+.|.|.|. +.|++++..|.. +.++.+..... .+.....|.|.+++.+|+ |.
T Consensus 14 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~L~I~~v~~~D~~G~ 91 (122)
T 2cry_A 14 PPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIST-EEGVISTLTISNIVRADFQTI 91 (122)
T ss_dssp SCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEE-TTEEEEEEECTTCCHHHHHSC
T ss_pred CCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecC-CCceEEEEEEcCCChhhCCce
Confidence 788888 8888999999999999999999997 999999998874 35565422111 122234699999999999 99
Q ss_pred EEEEEEcCCEEEEE
Q psy15667 78 YACVAENRAGTCEI 91 (286)
Q Consensus 78 Y~C~a~n~~g~~~~ 91 (286)
|+|.|.|..|....
T Consensus 92 Y~C~a~N~~G~~~~ 105 (122)
T 2cry_A 92 YNCTAWNSFGSDTE 105 (122)
T ss_dssp EEEEEECSSCEEEE
T ss_pred EEEEEECCCCeEEE
Confidence 99999999998764
No 318
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.2e-14 Score=99.10 Aligned_cols=72 Identities=28% Similarity=0.539 Sum_probs=62.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+.+..+.+|++++|.|.+.|.|.|.+.|+||+..+..... ..|.|.+++.+|+|.|+|.
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~ 75 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS--------------PVLILPEIGPQDQGTYSCV 75 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCCC--------------SEEEEESCCTTTCEEEECE
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCCC--------------CEEEECCCCcccCEEEEEE
Confidence 67888888899999999999999999999999999999988764321 1488999999999999999
Q ss_pred EEcCCE
Q psy15667 82 AENRAG 87 (286)
Q Consensus 82 a~n~~g 87 (286)
|.|..+
T Consensus 76 a~n~~~ 81 (96)
T 2ens_A 76 ATHSSH 81 (96)
T ss_dssp ECCSSC
T ss_pred EEeCCC
Confidence 999644
No 319
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=8.6e-14 Score=98.60 Aligned_cols=81 Identities=27% Similarity=0.454 Sum_probs=61.9
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCC-CCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSP-RFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|++..+.. ..++.+.........|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 20 v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l 98 (110)
T 2dm2_A 20 IFEGMPVTFTCRVA-GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRL 98 (110)
T ss_dssp EETTCCEEEEEEBC-CSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCE
T ss_pred EeCCCeEEEEEEEE-ecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEE
Confidence 45666666777654 677788999999988865 3444444332334579999999999999999999999999888888
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 99 ~V~ 101 (110)
T 2dm2_A 99 MVQ 101 (110)
T ss_dssp EEE
T ss_pred EEE
Confidence 773
No 320
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.48 E-value=4.3e-14 Score=99.64 Aligned_cols=80 Identities=29% Similarity=0.543 Sum_probs=64.0
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 26 v~~G~~v~L~C~~~-g~p~p~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 103 (106)
T 1nct_A 26 VYEGESARFSCDTD-GEPVPTVTWLRKGQVLSTSARHQVTTT-KYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLT 103 (106)
T ss_dssp ESSSSCEECCEEEE-CSSCCBCCBCSSSSCCTTCSSEEEEEC-SSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEE
T ss_pred EeCCCcEEEEEEEE-EcCCCEEEEEECCEECCCCCCEEEEEC-CCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEE
Confidence 45666666777653 667788899999988876666555442 3357899999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 104 V~ 105 (106)
T 1nct_A 104 IQ 105 (106)
T ss_dssp EC
T ss_pred EE
Confidence 85
No 321
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.48 E-value=1.1e-13 Score=95.10 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=57.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. + +++.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|.. .++.|.
T Consensus 17 v~~G~~v~l~C~v~-~-~~~~v~W~k~g~~i~~~~~~~i~~~-g~~~~L~I~~v~~~D~G~Y~C~a~n~~----~sa~L~ 89 (93)
T 1waa_A 17 VFVGETAHFEIELS-E-PDVHGQWKLKGQPLAASPDCEIIED-GKKHILILHNCQLGMTGEVSFQAANTK----SAANLK 89 (93)
T ss_dssp EETTSCEEEEEEES-S-SSCCCEEEETTEECCCBTTEEEEEE-TTEEEEEECSCCGGGCEEEEEEETTEE----EEEEEE
T ss_pred EeCCCCEEEEEEEC-C-CCCeEEEEECCEECcCCCCEEEEEE-CCEEEEEECCCChhhCEEEEEEECCCc----EEEEEE
Confidence 55677777777764 3 4477999999999987777666543 234689999999999999999999853 566776
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 90 V~ 91 (93)
T 1waa_A 90 VK 91 (93)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 322
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.48 E-value=4.4e-12 Score=103.64 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=28.5
Q ss_pred eeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 251 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 251 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
..|.|.....+| |.|+|.+.|..+.......|.+
T Consensus 216 s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 216 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 478899999999 9999999999987776666554
No 323
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=9.3e-14 Score=97.21 Aligned_cols=83 Identities=14% Similarity=0.300 Sum_probs=67.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.++.+.+|++++|.|. .+.|.+.+.|+||+..|..+.++.+.. .+....|.|.+++.+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQ-----EGLTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEE-----ETTEEEEEEESCCTTTCSEEEEE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEe-----CCCEEEEEECCCCcccCEEEEEE
Confidence 788998999999999999999999 488999999999999998777775531 22234699999999999999998
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
+......+.
T Consensus 82 ~g~~~~~~~ 90 (103)
T 2dku_A 82 IGQAQSRAQ 90 (103)
T ss_dssp CSSCBCCEE
T ss_pred eCCceEEEE
Confidence 544433333
No 324
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=2.2e-13 Score=96.88 Aligned_cols=85 Identities=21% Similarity=0.369 Sum_probs=66.3
Q ss_pred CCeeEecccc---ccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIE---QTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~---~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.+...+.+ +.+.+|+++.|.|.+. .|.+.+.|+|||..+..+.++.+.. .+....|.|.+++.+|+|.|
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y 83 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQK-----EDTVRRLVLPAVQLEDSGEY 83 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEE-----CSSEEEEEESSCCTTTCEEE
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEE-----CCCEEEEEECCCCcccCEEE
Confidence 5666656655 5788999999999995 8999999999999998766665421 12234699999999999999
Q ss_pred EEEEEcCCEEEEEe
Q psy15667 79 ACVAENRAGTCEIT 92 (286)
Q Consensus 79 ~C~a~n~~g~~~~~ 92 (286)
+|.|.|....+.+.
T Consensus 84 ~C~a~n~~~~~~l~ 97 (113)
T 2cpc_A 84 LCEIDDESASFTVT 97 (113)
T ss_dssp EEESSSCEEEEEEE
T ss_pred EEEEecCcEEEEEE
Confidence 99999966555544
No 325
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=7.5e-14 Score=96.92 Aligned_cols=77 Identities=29% Similarity=0.483 Sum_probs=55.9
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. |.|.|.+.|+|+|..+...... . ......|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 23 v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~-~---~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~ 97 (99)
T 2yr3_A 23 VIEGQDFVLQCSVR-GTPVPRITWLLNGQPIQYARST-C---EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97 (99)
T ss_dssp ECTTCCEEEECEEE-EESCCCCEEEESSSBCSSCCCE-E---ETTEEEEEECSCCTTCCBCEEEEEECSSCEEEEECCEE
T ss_pred EeCCCeEEEEEEEe-eeCCCeEEEEECCEECcccceE-e---eCCeEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEE
Confidence 34455555555442 4456677888888777543321 1 12356899999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 98 V~ 99 (99)
T 2yr3_A 98 VH 99 (99)
T ss_dssp EC
T ss_pred EC
Confidence 85
No 326
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.9e-13 Score=97.46 Aligned_cols=91 Identities=15% Similarity=0.228 Sum_probs=66.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC---CCCeeEEeeCCE-EcCC--CCeeEeceEEecc-cceeEEEEEcccccCC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN---PTPDIGWTLDGF-ELPT--NNRFVIGQFVSGH-GDVISHVNISHVTVED 74 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~---p~p~v~W~~~~~-~l~~--~~~~~~~~~~~~~-~~~~~~l~I~~~~~~D 74 (286)
++.|...+.++++.+|++++|.|.+.|. |.|.|+|+|+.. .+.. ..++.+....... ......|.|.+++.+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4568888999999999999999999885 799999999742 2221 2344332111111 1113469999999999
Q ss_pred CeEEEEEEEcCCEEEEEe
Q psy15667 75 GGEYACVAENRAGTCEIT 92 (286)
Q Consensus 75 ~G~Y~C~a~n~~g~~~~~ 92 (286)
+|.|+|+|.|..|..++.
T Consensus 92 ~G~Y~Cevsn~~g~~s~~ 109 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCG 109 (118)
T ss_dssp CSCEEEEEECSSCEEEEE
T ss_pred CEEEEEEEEEcCCcEEEE
Confidence 999999999999876543
No 327
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.47 E-value=2.4e-13 Score=102.48 Aligned_cols=80 Identities=28% Similarity=0.479 Sum_probs=60.8
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.+.+.|+|++..+....++.+.........|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 54 ~~G~~v~L~C~~~-g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 132 (154)
T 1fhg_A 54 VEGSAARFDCKVE-GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLV 132 (154)
T ss_dssp ETTSCEEEEEEEE-EESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEEE-EecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEE
Confidence 3455555555542 456677889999988876666655443334568999999999999999999999999999999887
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
+
T Consensus 133 ~ 133 (154)
T 1fhg_A 133 E 133 (154)
T ss_dssp E
T ss_pred e
Confidence 3
No 328
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.46 E-value=4.5e-13 Score=94.67 Aligned_cols=89 Identities=21% Similarity=0.369 Sum_probs=66.7
Q ss_pred CCCeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeCCEEcCCCCeeEeceEEeccc---ceeEEEEEcccccCCC
Q psy15667 1 TPPILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLDGFELPTNNRFVIGQFVSGHG---DVISHVNISHVTVEDG 75 (286)
Q Consensus 1 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~---~~~~~l~I~~~~~~D~ 75 (286)
.||.|...+.+..+.+|++++|.|.+.+. |.+.+.|+|++..+...............+ .....|.|.+++.+|+
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 37899999989999999999999999965 468999999999987543211000000000 0124699999999999
Q ss_pred eEEEEEEEcCCEEE
Q psy15667 76 GEYACVAENRAGTC 89 (286)
Q Consensus 76 G~Y~C~a~n~~g~~ 89 (286)
|.|+|.|.|..|..
T Consensus 89 G~Y~C~a~n~~g~~ 102 (112)
T 3so5_A 89 GXYQCVISNHFGSS 102 (112)
T ss_dssp EEEEEEEEETTEEE
T ss_pred CeEEEEEEeCCCcE
Confidence 99999999998874
No 329
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.46 E-value=2.4e-13 Score=95.86 Aligned_cols=77 Identities=27% Similarity=0.472 Sum_probs=51.4
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. |.|.+.+.|+|++..+....+..+.. ....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 23 ~~G~~v~l~C~~~-g~p~p~i~W~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 98 (108)
T 3kvq_A 23 SIGESIEVSCTAS-GNPPPQIMWFKDNETLVEDSGIVLKD---GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFII 98 (108)
T ss_dssp ETTCCEEEECBCC-----CCEEEEESSSBCCCBTTEEEET---TTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEE
T ss_pred eCCCeEEEEEECc-CcCCCeEEEEECCeEcccCCCeEEeC---CCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEE
Confidence 3455555555543 55667788999888776554443322 2467999999999999999999999999999999987
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
+
T Consensus 99 ~ 99 (108)
T 3kvq_A 99 E 99 (108)
T ss_dssp E
T ss_pred e
Confidence 3
No 330
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.46 E-value=2.9e-13 Score=95.26 Aligned_cols=79 Identities=25% Similarity=0.424 Sum_probs=58.1
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+ .+.|.+.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 26 ~~G~~v~l~C~~-~g~p~p~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 103 (107)
T 3irg_B 26 VSGAEAELKCVV-LGEPPPVVVWEKGGQQLAASERLSFPAD-GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTV 103 (107)
T ss_dssp ETTSCEEEEEEE-EEESCCEEEEEETTEECCCCSSEECCEE-TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eCCCeEEEEEEE-eecCCCEEEEEECCeECCCCCcEEEEeC-CCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEE
Confidence 344455555544 2445667888999888876655544332 22347999999999999999999999999999999887
Q ss_pred C
Q psy15667 286 K 286 (286)
Q Consensus 286 ~ 286 (286)
.
T Consensus 104 ~ 104 (107)
T 3irg_B 104 L 104 (107)
T ss_dssp E
T ss_pred E
Confidence 3
No 331
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=5.2e-14 Score=99.68 Aligned_cols=81 Identities=33% Similarity=0.544 Sum_probs=61.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +.|.+.+.|+|++..+.......+.........|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 21 v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 99 (110)
T 2dm3_A 21 VQEGKLCRMDCKVS-GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELV 99 (110)
T ss_dssp EESSSCBCCEEEEE-CSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEE
T ss_pred EeCCCEEEEEEEEE-EcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEE
Confidence 34556666666654 56777889999998886655444433333346899999999999999999999999999988888
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|.
T Consensus 100 V~ 101 (110)
T 2dm3_A 100 VA 101 (110)
T ss_dssp EE
T ss_pred Ee
Confidence 73
No 332
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.46 E-value=3.1e-13 Score=93.72 Aligned_cols=80 Identities=20% Similarity=0.371 Sum_probs=58.6
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC--CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR--FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
+.+|+.+.|.|.+. +.|.+.+.|+|++..+... .++.+... .....|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 17 ~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 94 (100)
T 3irg_A 17 IDEGKVLTVACAFT-GEPTPEVTWSCGGRKIHSQEQGRFHIENT-DDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVN 94 (100)
T ss_dssp EETTSEEEEEEEEE-EESCCEEEEEETTEECCTTGGGTEEEEEC-SSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred EcCCCcEEEEEEEE-EcCCCceEEEECCEEeecCCCCEEEEEec-CCEEEEEEeecCcccCEEEEEEEEeCCCcEEEEEE
Confidence 34555555555543 4566788888888877532 23333322 33578999999999999999999999999999999
Q ss_pred EEEC
Q psy15667 283 LQVK 286 (286)
Q Consensus 283 L~V~ 286 (286)
|.|+
T Consensus 95 l~V~ 98 (100)
T 3irg_A 95 IHIR 98 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 333
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.46 E-value=3.1e-12 Score=102.54 Aligned_cols=76 Identities=22% Similarity=0.457 Sum_probs=43.9
Q ss_pred CCCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCC---CceeeecC--CCeeeEEEcccCCCCCeEEEEEEEecccceee
Q psy15667 206 PEGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRF---PVNVSDLD--SFSSLLSINSVSAAHSGEYTCVASNTAAQARY 279 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~---~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 279 (286)
.+|+.+.|.|.+....| ++.+.| ++..+.... ........ .....|.|.....+| |.|+|.+.|..+....
T Consensus 142 ~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 218 (226)
T 3mlr_H 142 TSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 218 (226)
T ss_dssp TTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEE
T ss_pred cCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCe
Confidence 35666666666554444 456777 333221110 00000000 013468899999999 9999999999987766
Q ss_pred EEEEE
Q psy15667 280 SSKLQ 284 (286)
Q Consensus 280 ~~~L~ 284 (286)
...|.
T Consensus 219 ~~~~~ 223 (226)
T 3mlr_H 219 DKKVE 223 (226)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 65554
No 334
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.46 E-value=3.2e-13 Score=93.53 Aligned_cols=76 Identities=26% Similarity=0.502 Sum_probs=59.0
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+..+.|.+.+.|+|++....... .+. ..+.|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 22 v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~ 95 (98)
T 1gl4_B 22 VRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AMD----FNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95 (98)
T ss_dssp ECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EEE----ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--eec----CCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEE
Confidence 56777777777776567888999999765433221 111 135799999999999999999999999999999998
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 96 V~ 97 (98)
T 1gl4_B 96 VQ 97 (98)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 335
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=5.3e-13 Score=92.69 Aligned_cols=77 Identities=22% Similarity=0.387 Sum_probs=62.9
Q ss_pred CCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
..+.+|+.+.|.|.+. +.| +.+.|+|++..+....++.+. ...|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 13 ~~v~~G~~v~L~C~~~-g~p-p~i~W~k~g~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 85 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLR-DDV-QSINWLRDGVQLAESNRTRIT-----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFS 85 (99)
T ss_dssp CCBCTTSCEEEECCCC-SSC-CEEEEEESSSBCCCCSSEEEC-----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCcEEEEEEec-CCC-CeEEEEECCEECCCCCcEEEE-----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEE
Confidence 3467899999999875 455 699999999988665554432 358999999999999999999999999988888
Q ss_pred EEEC
Q psy15667 283 LQVK 286 (286)
Q Consensus 283 L~V~ 286 (286)
|.|.
T Consensus 86 l~V~ 89 (99)
T 2cr3_A 86 VNVS 89 (99)
T ss_dssp ECBC
T ss_pred EEEe
Confidence 8763
No 336
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=3.3e-13 Score=93.75 Aligned_cols=73 Identities=29% Similarity=0.560 Sum_probs=61.4
Q ss_pred ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG 87 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g 87 (286)
.+.++++.+|++++|.|.+.|.| |.+.|+|++..+....++.+. +. .|.|.+++.+|+|.|+|.|.|..|
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~------~~---~L~i~~v~~~D~G~Y~C~a~n~~g 78 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT------GE---EVEVQDSVPADSGLYACVTSSPSG 78 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC------SS---EEEETTCCTTTCEEEEEEEEETTE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE------CC---EEEEccCCHHHCEEEEEEEEeCCc
Confidence 45567899999999999999987 799999999988776666432 21 489999999999999999999988
Q ss_pred EEE
Q psy15667 88 TCE 90 (286)
Q Consensus 88 ~~~ 90 (286)
...
T Consensus 79 ~~~ 81 (99)
T 2cr3_A 79 SDT 81 (99)
T ss_dssp EEE
T ss_pred eEE
Confidence 754
No 337
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.5e-13 Score=94.42 Aligned_cols=77 Identities=30% Similarity=0.559 Sum_probs=59.6
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC-CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|++..+... .++.+. ..+.|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 20 v~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 94 (100)
T 2edj_A 20 LAVDGTALLKCKAT-GDPLPVISWLKEGFTFPGRDPRATIQ----EQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVL 94 (100)
T ss_dssp EESSSEEEECCEEE-CSSCCEEEEEESSSEESSSCSSCEEC----TTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEE
T ss_pred EcCCCcEEEEEEEE-EcCCCEEEEEECCEECCCCCCCEEEc----CCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEE
Confidence 45677777777664 6777889999998877532 233221 23579999999999999999999999999999999
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 95 ~V~ 97 (100)
T 2edj_A 95 DVT 97 (100)
T ss_dssp EEE
T ss_pred EEe
Confidence 873
No 338
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.43 E-value=3.8e-12 Score=104.50 Aligned_cols=32 Identities=19% Similarity=0.413 Sum_probs=26.0
Q ss_pred eeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 251 SLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 251 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
..|.|.....+| |.|+|.+.|..+.......|
T Consensus 189 s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 220 (263)
T 3iu4_H 189 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 220 (263)
T ss_dssp EEEEEETTHHHH-CCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEECHhHcCC-CEEEEEEEECCCCcceeEEE
Confidence 468898888889 99999999998876655544
No 339
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.43 E-value=1.1e-11 Score=111.53 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=60.2
Q ss_pred eEEEeeCCccCcCC--------CC------cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEE------cCCCcee
Q psy15667 100 LIAWFKDGRQIPGR--------TS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL------GGLPYVR 159 (286)
Q Consensus 100 ~~~W~~~g~~l~~~--------~~------~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v------~~~~~~~ 159 (286)
.|+|+|||..+... .. .+.|.|..+..+|.|.|+|.|.|..+... ...+.. ...|.+.
T Consensus 330 ~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~--~~~~~~~~~~~~~~~p~v~ 407 (512)
T 1zvo_C 330 HLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ--RLMALREPAAQAPVKLSLN 407 (512)
T ss_pred EEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC--ceeEEeecCCCCCCCCEEE
Confidence 78999999876511 01 13588999999999999999999876432 112211 1234433
Q ss_pred cCCceEEecCCCEE-EEeeEeeecCC--eEEEEEcCCc
Q psy15667 160 LIPKVTAIDGEGLS-IKCPVAGYPIE--EVHWEKVPPK 194 (286)
Q Consensus 160 ~~~~~~~~~g~~~~-l~c~~~~~p~~--~v~w~~~~~~ 194 (286)
..+... .|+.+. |.|.+.|.+++ .+.|.+.+..
T Consensus 408 ~~~~~~--~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~ 443 (512)
T 1zvo_C 408 LLASSD--PPEAASWLLCEVSGFSPPNILLMWLEDQRE 443 (512)
T ss_pred EEccCc--CCCCceEEEEEEeeeCCCCcEEEEEECCeE
Confidence 322211 688899 99999996544 5889996544
No 340
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=3.9e-13 Score=95.88 Aligned_cols=81 Identities=19% Similarity=0.236 Sum_probs=52.1
Q ss_pred CCCCeEEEEEeeec--CCCCCeEEEEeCCee-CCC--CCCceeeec-CC----CeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 206 PEGARTRVICGVTH--GDPPLTIRWLKDGKP-LSP--RFPVNVSDL-DS----FSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 206 ~~g~~~~l~c~~~~--~~p~~~~~W~~~g~~-~~~--~~~~~~~~~-~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.+|+.+.|.|.+.. +.|.|.|.|+|++.. +.. ..++.+... .. ....|.|.++..+|+|.|+|+|.|..|
T Consensus 25 ~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g 104 (118)
T 2edn_A 25 ETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDT 104 (118)
T ss_dssp ETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSC
T ss_pred eCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCC
Confidence 34444444444432 135677778876421 111 122333211 11 246899999999999999999999999
Q ss_pred ceeeEEEEEEC
Q psy15667 276 QARYSSKLQVK 286 (286)
Q Consensus 276 ~~~~~~~L~V~ 286 (286)
..++++.|.|+
T Consensus 105 ~~s~~~~L~V~ 115 (118)
T 2edn_A 105 CDSCGFNIDVE 115 (118)
T ss_dssp EEEEEECCEEE
T ss_pred cEEEEEEEEEE
Confidence 99999999884
No 341
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.43 E-value=6.4e-13 Score=91.45 Aligned_cols=74 Identities=24% Similarity=0.444 Sum_probs=61.3
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. + .|.+.|+|+|..+....+..+. ...|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 13 v~~G~~~~l~C~~~-~--~p~v~W~k~g~~~~~~~~~~~~-----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 84 (95)
T 4hwu_A 13 VAPGESLELQCMLK-D--AAVISWTKDGVHLGPNNRTVLI-----GEYLQIKGATPRDSGLYACTAARTVDSETWIFMVN 84 (95)
T ss_dssp ECTTSCEEEECCCC-T--TCEEEEEETTEEECCCSSEEEE-----TTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred ECCCCEEEEEEEeC-C--CCEEEEEECCEECCCCceEEEe-----CCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEE
Confidence 56788888888765 3 5799999999988766554432 34799999999999999999999999999999988
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|.
T Consensus 85 V~ 86 (95)
T 4hwu_A 85 VT 86 (95)
T ss_dssp EC
T ss_pred Ee
Confidence 74
No 342
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.7e-13 Score=95.66 Aligned_cols=75 Identities=19% Similarity=0.459 Sum_probs=59.9
Q ss_pred cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 11 EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
+..+.+|++++|.|.+. .|.+.+.|+|||..+..+.++.+.. .+ ....|.|.+++.+|+|.|+|.|.|....+.
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~----~~-~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~ 93 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEA----VG-CTRRLVVQQAGQAEAGEYSCEAGGQQLSFR 93 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEE----ET-TEEEEEETTCCTTTCSCEEEEETTEECCEE
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEE----cC-CEEEEEECCCCcccCEEEEEEcCCCcEEEE
Confidence 44789999999999998 8999999999999998777765431 12 234699999999999999999987654444
Q ss_pred E
Q psy15667 91 I 91 (286)
Q Consensus 91 ~ 91 (286)
+
T Consensus 94 l 94 (102)
T 2eo1_A 94 L 94 (102)
T ss_dssp E
T ss_pred E
Confidence 3
No 343
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.42 E-value=7.6e-13 Score=91.60 Aligned_cols=79 Identities=24% Similarity=0.376 Sum_probs=60.3
Q ss_pred CCeeEecc-ccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSF-IEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~-~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.+.... ..+.+.+|++++|.|.+. +.|.+.+.|+|++........+. ..+ .|.|.+++.+|+|.|+
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~~~~------~~~----~L~i~~v~~~D~G~Y~ 78 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMD------FNG----ILTIRNVQPSDAGTYV 78 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTTEEE------ETT----EEEECSCCGGGCEEEE
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCceeec------CCC----EEEEeCCChhhCEEEE
Confidence 44555444 556899999999999998 68999999999865443332221 112 4899999999999999
Q ss_pred EEEEcCCEEEE
Q psy15667 80 CVAENRAGTCE 90 (286)
Q Consensus 80 C~a~n~~g~~~ 90 (286)
|.|.|..|...
T Consensus 79 C~a~n~~g~~~ 89 (98)
T 1gl4_B 79 CTGSNMFAMDQ 89 (98)
T ss_dssp EEEECSSCEEE
T ss_pred EEecCCCCccc
Confidence 99999988754
No 344
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=2.2e-12 Score=92.54 Aligned_cols=87 Identities=22% Similarity=0.342 Sum_probs=62.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|... .+..+ .+...|.|.+.|+|.|.+.|+|||..+..+.++....... .......|.|.++..+|+|.|+|.
T Consensus 8 pP~i~~~-~~~~~--~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~ 83 (118)
T 1wwc_A 8 PPRVVSL-EEPEL--RLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQE-GEISEGCLLFNKPTHYNNGNYTLI 83 (118)
T ss_dssp CCCCCCC-CCCCC--CCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEEC-SSEEEEEEEEESCCGGGCEEEEEE
T ss_pred CCceecc-CCCee--ccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEecc-CccccEEEEECCCChhcCEEEEEE
Confidence 5665543 22222 3667899999999999999999999998766554321110 001123599999999999999999
Q ss_pred EEcCCEEEEEe
Q psy15667 82 AENRAGTCEIT 92 (286)
Q Consensus 82 a~n~~g~~~~~ 92 (286)
|.|..|....+
T Consensus 84 a~N~~G~~~~~ 94 (118)
T 1wwc_A 84 AKNPLGTANQT 94 (118)
T ss_dssp EEETTEEEEEE
T ss_pred EECCCCeEeeE
Confidence 99999986543
No 345
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.4e-12 Score=93.98 Aligned_cols=81 Identities=17% Similarity=0.209 Sum_probs=52.3
Q ss_pred CCCCeEEEEEeeec--CCCCCeEEEEeCCeeC---CCCCCceeeec--C---CCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 206 PEGARTRVICGVTH--GDPPLTIRWLKDGKPL---SPRFPVNVSDL--D---SFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 206 ~~g~~~~l~c~~~~--~~p~~~~~W~~~g~~~---~~~~~~~~~~~--~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
.+|+.+.|.|.+.. +.|.|.|.|+|++... ....++.+... . .....|.|.++..+|+|.|+|+|.|..|
T Consensus 20 ~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g 99 (126)
T 2dav_A 20 KVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDK 99 (126)
T ss_dssp ETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSC
T ss_pred eCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCC
Confidence 34444444444431 2366778888864211 01223333211 0 0246899999999999999999999999
Q ss_pred ceeeEEEEEEC
Q psy15667 276 QARYSSKLQVK 286 (286)
Q Consensus 276 ~~~~~~~L~V~ 286 (286)
...+++.|.|.
T Consensus 100 ~~~~~~~L~V~ 110 (126)
T 2dav_A 100 FDSCSFDLEVH 110 (126)
T ss_dssp EEEECCEEEEE
T ss_pred cEEEEEEEEEE
Confidence 99999999873
No 346
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.41 E-value=9.7e-12 Score=95.91 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=44.2
Q ss_pred CCCCCeEEEEEeeecCCCCC--eEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 205 LPEGARTRVICGVTHGDPPL--TIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~--~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
+.+|+.+.|.|.+..+.|.+ .|+|+|+++.+.... ......+.+|.+.....+|...|+|.|.|.++
T Consensus 98 ~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~----~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 98 QPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP----AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp ECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE----CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred ccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc----CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 55777788888777666764 589999999874321 01112234666654444444499999999887
No 347
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.40 E-value=2.2e-12 Score=101.80 Aligned_cols=85 Identities=24% Similarity=0.383 Sum_probs=68.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
+.+...+....+.+|+.+.|.|.+.|.|.|.+.|++|+..+..+.++.+.. ..+....|.|.++..+|+|.|+|.|
T Consensus 118 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a 193 (212)
T 2r15_A 118 RVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKF----EAGRTAYFTINGVSTADSGKYGLVV 193 (212)
T ss_dssp EEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEE----ETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred cccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEE----cCCCEEEEEEcCcchHHCeEEEEEE
Confidence 344444555689999999999999999999999999999998777765422 1122346999999999999999999
Q ss_pred EcCCEEEEE
Q psy15667 83 ENRAGTCEI 91 (286)
Q Consensus 83 ~n~~g~~~~ 91 (286)
.|..|....
T Consensus 194 ~N~~g~~~~ 202 (212)
T 2r15_A 194 KNKYGSETS 202 (212)
T ss_dssp EETTEEEEE
T ss_pred EcCCCcEEE
Confidence 999987643
No 348
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=6.3e-13 Score=95.35 Aligned_cols=76 Identities=29% Similarity=0.511 Sum_probs=59.7
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC-CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+... .++.+.. .+.|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 20 v~~G~~v~l~C~~~-g~p~p~i~W~k~g~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 94 (118)
T 2eo9_A 20 VAVDGTFVLSCVAT-GSPVPTILWRKDGVLVSTQDSRIKQLE----NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYI 94 (118)
T ss_dssp EETTCEEEEECBCC-CSSCCEEEEEESSSBCCTTSTTEEEEE----TTEEEEESCCGGGCCCEEEEEECSSCEEEEECCE
T ss_pred EcCCCeEEEEEEEE-ecCCCEEEEEECCEECcCCCCeEEEcc----CCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEE
Confidence 45677777777663 6778889999999888543 3333322 3479999999999999999999999999888888
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 95 ~V 96 (118)
T 2eo9_A 95 EV 96 (118)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 349
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.39 E-value=3.7e-12 Score=88.48 Aligned_cols=76 Identities=25% Similarity=0.504 Sum_probs=62.3
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+. .|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.| |....++.|
T Consensus 19 ~v~~G~~v~l~C~~~--~p~~~v~W~k~g~~i~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l 91 (100)
T 2yuv_A 19 QVDKGGRVRFVVELA--DPKLEVKWYKNGQEIRPSTKYIFEHK-GCQRILFINNCQMTDDSEYYVTA----GDEKCSTEL 91 (100)
T ss_dssp EECTTEEEEEEEEES--CTTSCEEEEESSCBCCCBTTEEEEEE-TTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEE
T ss_pred EEcCCCcEEEEEEec--CCCceEEEEECCEECCCCCCEEEEec-CCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEE
Confidence 367899999999886 58889999999999877666665543 23457999999999999999999 777888888
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|+
T Consensus 92 ~V~ 94 (100)
T 2yuv_A 92 FVR 94 (100)
T ss_dssp EEC
T ss_pred EEe
Confidence 874
No 350
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=2.3e-12 Score=92.42 Aligned_cols=76 Identities=25% Similarity=0.384 Sum_probs=60.2
Q ss_pred CeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecC---CCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 209 ARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLD---SFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 209 ~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
....|.|.+. |.|.|.+.|+|+|..+....+..+.... ...+.|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 21 ~~~~l~C~~~-g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 21 LEHCIEFVVR-GNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp CEEEEEEEEE-CSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceEEEEEee-eeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 4567778775 6888999999999998766544433211 12568999999999999999999999999999988765
No 351
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.39 E-value=1.5e-12 Score=101.20 Aligned_cols=85 Identities=31% Similarity=0.491 Sum_probs=70.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+.++.+.. .+. ...|.|.++..+|+|.|+|.
T Consensus 103 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~----~~~-~~~L~i~~~~~~d~G~Y~C~ 177 (194)
T 2a38_A 103 PPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQ----EGD-LYSLLIAEAYPEDSGTYSVN 177 (194)
T ss_dssp EEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEE----ETT-EEEEEEEEECGGGCEEEEEE
T ss_pred CCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEE----cCC-EEEEEECCCChhcCeEEEEE
Confidence 5677777778889999999999999999999999999999998777665421 222 23589999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 178 a~n~~g~~~~ 187 (194)
T 2a38_A 178 ATNSVGRATS 187 (194)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCCceEE
Confidence 9999987643
No 352
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.39 E-value=1.9e-12 Score=88.32 Aligned_cols=70 Identities=23% Similarity=0.420 Sum_probs=54.7
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccccee-eEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR-YSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-~~~~L 283 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+.... ...|.|.++..+|+|.|+|.|.|..|... ..+.|
T Consensus 15 v~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 83 (91)
T 3bfo_A 15 LMPGSTLVLQCVAV-GSPIPHYQWFKNELPLTHET----------KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 83 (91)
T ss_dssp ECTTSCEEEECEEE-CSSCCEEEEEETTEECTTCC----------SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred ecCCCcEEEEEEec-cCCCCEEEEEcCCeeCCcCC----------CCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEE
Confidence 55677777777654 67778999999998775432 34799999999999999999999999754 45667
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 84 ~V 85 (91)
T 3bfo_A 84 II 85 (91)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 353
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.38 E-value=1.7e-12 Score=91.56 Aligned_cols=37 Identities=24% Similarity=0.286 Sum_probs=34.5
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEEC
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQVK 286 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V~ 286 (286)
...|.|.++..+|+|.|+|.|.|..|...+++.|.|.
T Consensus 71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 4689999999999999999999999999999999883
No 354
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=9.5e-13 Score=94.03 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=53.7
Q ss_pred CCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 206 PEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+|+.+.|.|.+. +.|.|.+.|+|+|..+....++.+.........|.|.++..+|+|.|+|. +|....++.|.|
T Consensus 26 ~~G~~v~l~C~~~-g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~L~V 100 (115)
T 2cr6_A 26 QEGSSATFRCRIS-PANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE----AGDQRASAALRV 100 (115)
T ss_dssp ETTSCEECCCEEE-STTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE----ETTEECCEEEEE
T ss_pred eCCCcEEEEEEEc-CCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE----ECCeeEEEEEEE
Confidence 3455555555544 56667888999998887666555442223356799999999999999999 466677777776
No 355
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.38 E-value=1.2e-12 Score=89.98 Aligned_cols=72 Identities=32% Similarity=0.543 Sum_probs=59.5
Q ss_pred ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG 87 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g 87 (286)
.+.+..+.+|++++|.|.+.+ .|.+.|++||..+..+.++.+. +. .|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~------~~---~L~i~~~~~~D~G~Y~C~a~n~~g 75 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI------GE---YLQIKGATPRDSGLYACTAARTVD 75 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE------TT---EEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe------CC---EEEECcCCcccCEEEEEEEccCCC
Confidence 456678999999999999987 4799999999999877666431 11 488999999999999999999988
Q ss_pred EEE
Q psy15667 88 TCE 90 (286)
Q Consensus 88 ~~~ 90 (286)
...
T Consensus 76 ~~~ 78 (95)
T 4hwu_A 76 SET 78 (95)
T ss_dssp EEE
T ss_pred cEE
Confidence 654
No 356
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.38 E-value=5.5e-12 Score=100.84 Aligned_cols=148 Identities=15% Similarity=0.178 Sum_probs=90.7
Q ss_pred eeEe-cccc-ccccCCCcEEEEEEeecCCCC---eeEEeeCCEEc----CCC-------------CeeEeceEEecccce
Q psy15667 4 ILTY-SFIE-QTLQPGPAVSLKCIASGNPTP---DIGWTLDGFEL----PTN-------------NRFVIGQFVSGHGDV 61 (286)
Q Consensus 4 ~~~~-~~~~-~~~~~G~~~~l~C~~~g~p~p---~v~W~~~~~~l----~~~-------------~~~~~~~~~~~~~~~ 61 (286)
.|.+ .|.+ +++.+|++++|.|.+.+.|.+ .|.|+|++... ..+ .|... ........
T Consensus 4 Qf~V~~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~--~~~~~~~~ 81 (226)
T 4f80_A 4 QFSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSI--LRDGITAG 81 (226)
T ss_dssp CCEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEE--ECTTGGGT
T ss_pred eEEEECCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEE--ecccccCC
Confidence 3444 3333 578999999999999887665 69999876321 001 11110 00000111
Q ss_pred eEEEEEcccccCCCeEEEEEEEcCCEEEEEe-----------------------------cCC-CCCeeEEEeeCC-ccC
Q psy15667 62 ISHVNISHVTVEDGGEYACVAENRAGTCEIT-----------------------------PYD-SGPYLIAWFKDG-RQI 110 (286)
Q Consensus 62 ~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~~~-----------------------------~~~-~~~~~~~W~~~g-~~l 110 (286)
...|.|.+++.+|+|.|+|.|.|..|..... ..+ .+++.+.|+|++ ..+
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~ 161 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENI 161 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEc
Confidence 2469999999999999999999988864321 011 245789999964 444
Q ss_pred cCC------CCc---ceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcC
Q psy15667 111 PGR------TSS---TSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 154 (286)
Q Consensus 111 ~~~------~~~---~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~ 154 (286)
... ... ..+.+.++..+|+|.|+|.|.|..|.. ...+.|.|..
T Consensus 162 ~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~-~~~~~v~v~e 213 (226)
T 4f80_A 162 PTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGL-EKTASISIAD 213 (226)
T ss_dssp CCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTE-EEEEEECCCT
T ss_pred CCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCe-EEEEEEEECC
Confidence 321 111 223455678899999999999999875 3456666643
No 357
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.38 E-value=1.9e-12 Score=89.14 Aligned_cols=75 Identities=17% Similarity=0.336 Sum_probs=59.3
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+ +.|.+.+.|+|+|..+....++.+.... ....|.|.++..+|+|.|+|.| |....++.|.
T Consensus 20 v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~ 92 (95)
T 2k1m_A 20 VAAGSPAVFEAET--ERAGVKVRWQRGGSDISASNKYGLATEG-TRHTLTVREVGPADQGSYAVIA----GSSKVKFDLK 92 (95)
T ss_dssp EETTSCEEEEEEC--SSSSCCCEEECSSSEECSSTTCEEEEET-TEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEE
T ss_pred EeCCCcEEEEEEe--CCCCCeEEEEECCEECCCCCcEEEEEcC-CEEEEEEcCCCcccCEEEEEEE----CCceEEEEEE
Confidence 5577788888876 5677889999999988766666654432 3467999999999999999999 6677788888
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 93 V~ 94 (95)
T 2k1m_A 93 VI 94 (95)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 358
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.37 E-value=1.7e-12 Score=91.28 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=62.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCE-EcC-------CCCeeEeceEEecccceeEEEEEcccccC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGF-ELP-------TNNRFVIGQFVSGHGDVISHVNISHVTVE 73 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~-~l~-------~~~~~~~~~~~~~~~~~~~~l~I~~~~~~ 73 (286)
+|.|...+.++++.+|++++|.|.+.+.|.+.+.|++++. .+. .+.|+.+... ......|.|.+++.+
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~~L~I~~v~~~ 81 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRA----SWHELSISVSDVSLS 81 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEE----SSSEEEEEECSCCGG
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeec----CCCcEEEEECCCChh
Confidence 5778888999999999999999999999999999999775 221 2335443211 112346999999999
Q ss_pred CCeEEEEEEEcCCEEE
Q psy15667 74 DGGEYACVAENRAGTC 89 (286)
Q Consensus 74 D~G~Y~C~a~n~~g~~ 89 (286)
|+|.|+|.|.| .+..
T Consensus 82 D~G~Y~C~~~n-~~~~ 96 (108)
T 3m45_A 82 DEGQYTCSLFT-MPVK 96 (108)
T ss_dssp GCEEEEEEECS-SSCE
T ss_pred HCeEEEEEEEc-CCCc
Confidence 99999999999 5543
No 359
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=9.1e-13 Score=92.39 Aligned_cols=76 Identities=16% Similarity=0.257 Sum_probs=55.3
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+...++++.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.| ...++.|.
T Consensus 20 v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~a~L~ 94 (104)
T 2eny_A 20 VLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ-GRKYILVVREAAPSDAGEVVFSVRG----LTSKASLI 94 (104)
T ss_dssp EESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEE-TTEEEEEECSCCTTTCSCEEEEETT----EEEEECEE
T ss_pred EcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEc-CCEEEEEECCCCHHHCEEEEEEECC----eeEEEEEE
Confidence 445666666666543333457899999999877766665543 2356899999999999999999865 45667777
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 95 V 95 (104)
T 2eny_A 95 V 95 (104)
T ss_dssp E
T ss_pred E
Confidence 6
No 360
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.36 E-value=1.2e-13 Score=99.73 Aligned_cols=82 Identities=21% Similarity=0.320 Sum_probs=60.7
Q ss_pred CCCCCCeEEEEEeeecCCCCCe-EEEEeCCeeCCC--CCCceeeec---CCCeeeEEEcccCCCCC-eEEEEEEEecccc
Q psy15667 204 GLPEGARTRVICGVTHGDPPLT-IRWLKDGKPLSP--RFPVNVSDL---DSFSSLLSINSVSAAHS-GEYTCVASNTAAQ 276 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~-~~W~~~g~~~~~--~~~~~~~~~---~~~~~~L~i~~v~~~d~-G~Y~C~a~N~~g~ 276 (286)
.+.+|+.+.|.|.+. |.|.|. +.|+|++..+.. ..++.+... ......|.|.++..+|. |.|+|.|.|.+|.
T Consensus 24 ~~~~G~~v~l~C~~~-g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~ 102 (122)
T 2cry_A 24 HALHGEKGQIKCFIR-STPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGS 102 (122)
T ss_dssp CCCTTSCCCCCEEEC-CSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCE
T ss_pred EEecCCCEEEEEEEe-ecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCe
Confidence 356677777777765 566665 899999887764 234443211 11145899999999999 9999999999999
Q ss_pred eeeEEEEEEC
Q psy15667 277 ARYSSKLQVK 286 (286)
Q Consensus 277 ~~~~~~L~V~ 286 (286)
....+.|.|+
T Consensus 103 ~~~~~~l~V~ 112 (122)
T 2cry_A 103 DTEIIRLKEQ 112 (122)
T ss_dssp EEEEECCCCS
T ss_pred EEEEEEEEEC
Confidence 9988888764
No 361
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.36 E-value=4.9e-12 Score=118.54 Aligned_cols=158 Identities=16% Similarity=0.192 Sum_probs=92.4
Q ss_pred CEEEEEe--cCCCCCeeEEEeeCCccCcCCCCcceEEEccC-CCCCCeeEEEEEEcCCcceeeeeeEEEEc---CCCcee
Q psy15667 86 AGTCEIT--PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPV-GREDRGIYQCIARRSDGDVAQGSAELQLG---GLPYVR 159 (286)
Q Consensus 86 ~g~~~~~--~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v-~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~---~~~~~~ 159 (286)
.|...+. ..+.+.+.+.|.|+|..+.. .....+.|..+ .....+.|.|.+.+..|........+... ..|.+.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~-~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~ 169 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRT-WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL 169 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSS-CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCc-eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc
Confidence 4544433 33445578999999987632 22345666655 33345889998888877654322222221 223332
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEE-EE--eCCeeCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIR-WL--KDGKPLS 236 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~-W~--~~g~~~~ 236 (286)
......+..|+++.|.|.+.|.| .|.+. |+ ++|..+.
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P----------------------------------------~p~i~~W~~~~~g~~l~ 209 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRT----------------------------------------VAGDRLWLQGIDVRDAP 209 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCC----------------------------------------CTTCEEEEEESSSCCEE
T ss_pred cccceEEeCCCcEEEEEEeCCCC----------------------------------------CCceeEEEecCCCcccc
Confidence 23344455555555555555544 44444 55 5555442
Q ss_pred CCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc-eeeEEEEEE
Q psy15667 237 PRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ-ARYSSKLQV 285 (286)
Q Consensus 237 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~-~~~~~~L~V 285 (286)
......+ ......+.|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 210 ~~~~~~~-~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V 258 (731)
T 2v5y_A 210 LKEIKVT-SSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 258 (731)
T ss_dssp EEEEEEC-CSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccceEEe-ccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEE
Confidence 2110000 01112468999999999999999999999997 677777766
No 362
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.36 E-value=8.8e-12 Score=89.80 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=33.5
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
...|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 73 ~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V 108 (122)
T 3s35_X 73 LSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 108 (122)
T ss_dssp EEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEEEccCCCceEEEEEEEE
Confidence 457999999999999999999999999999999887
No 363
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=3e-12 Score=89.48 Aligned_cols=75 Identities=23% Similarity=0.415 Sum_probs=58.3
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC--CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSS 281 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 281 (286)
.+.+|+.+.|.|.+. + |.+.+.|+|+|..+.... ++.+... .....|.|.++..+|+|.|+|.|.| ...++
T Consensus 18 ~v~~G~~v~l~C~~~-~-~~~~v~W~k~g~~l~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~ 90 (103)
T 1x44_A 18 TAYCGERVELECEVS-E-DDANVKWFKNGEEIIPGPKSRYRIRVE-GKKHILIIEGATKADAAEYSVMTTG----GQSSA 90 (103)
T ss_dssp EEETTEEEEEEEECS-S-SSCCCEEEETTEECCCSTTCSEEEEEE-TTEEEEEEEEECTTTCSEEEEEETT----EEEEE
T ss_pred EEECCCCEEEEEEec-C-CCCeEEEEECCEECCCCCceEEEEEEc-CCEEEEEECCCCcccCEEEEEEECC----CcEEE
Confidence 366888889999874 4 668999999999987765 4455432 2356899999999999999999998 45666
Q ss_pred EEEE
Q psy15667 282 KLQV 285 (286)
Q Consensus 282 ~L~V 285 (286)
.|.|
T Consensus 91 ~l~V 94 (103)
T 1x44_A 91 KLSV 94 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 364
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.35 E-value=4.3e-12 Score=89.57 Aligned_cols=82 Identities=23% Similarity=0.477 Sum_probs=56.8
Q ss_pred CCCCCeEEEEEeeecC-CCCCeEEEEeCCeeCCCCCCceeeecCC-------CeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 205 LPEGARTRVICGVTHG-DPPLTIRWLKDGKPLSPRFPVNVSDLDS-------FSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~-~p~~~~~W~~~g~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
+.+|+.+.|.|.+... .+.+.+.|+|++..+............. ....|.|.++..+|+|.|+|.|.|..|.
T Consensus 22 v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 101 (112)
T 3so5_A 22 AIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGS 101 (112)
T ss_dssp ECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCc
Confidence 4455666666655432 4568899999998876432111111100 1368999999999999999999999998
Q ss_pred -eeeEEEEEEC
Q psy15667 277 -ARYSSKLQVK 286 (286)
Q Consensus 277 -~~~~~~L~V~ 286 (286)
.+..+.|.|.
T Consensus 102 ~~s~~~~l~V~ 112 (112)
T 3so5_A 102 SYSVXAXLTIN 112 (112)
T ss_dssp EECCCEEEEEC
T ss_pred EEEeEEEEEeC
Confidence 5688888873
No 365
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.35 E-value=5.9e-12 Score=99.65 Aligned_cols=83 Identities=30% Similarity=0.498 Sum_probs=66.1
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCC---CeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTN---NRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~---~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
|.|...+....+.+|+++.|.|.+.|.|.|.+.|++||..+... .++... . ......|.|.+++.+|+|.|+
T Consensus 109 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~---~--~~~~~~L~i~~~~~~d~G~Y~ 183 (212)
T 2yd6_A 109 PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQL---R--SESIGALQIEQSEESDQGKYE 183 (212)
T ss_dssp CEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEE---E--ETTEEEEEECSCCGGGCEEEE
T ss_pred ceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEE---e--cCCeEEEEEcCCCcccCEEEE
Confidence 67777777788999999999999999999999999999998653 333221 1 111246999999999999999
Q ss_pred EEEEcCCEEEE
Q psy15667 80 CVAENRAGTCE 90 (286)
Q Consensus 80 C~a~n~~g~~~ 90 (286)
|.|.|..|...
T Consensus 184 C~a~N~~G~~~ 194 (212)
T 2yd6_A 184 CVATNSAGTRY 194 (212)
T ss_dssp EEEEETTEEEE
T ss_pred EEEECCCCccc
Confidence 99999999865
No 366
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.34 E-value=4.1e-12 Score=100.79 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=43.7
Q ss_pred CeeEEEeeCCccCcCC----------------CCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCce
Q psy15667 98 PYLIAWFKDGRQIPGR----------------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYV 158 (286)
Q Consensus 98 ~~~~~W~~~g~~l~~~----------------~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~ 158 (286)
++.+.|+++|..+... .....|.|.++..+|+|.|+|.|.|..|.. ...+.|.|..+|.+
T Consensus 136 ~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 136 GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTK-KNSTFVRVHEDPIE 211 (213)
T ss_dssp CCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEEC----
T ss_pred ceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcE-EEEEEEEEeccccc
Confidence 3579999998864210 012359999999999999999999999876 55788888776654
No 367
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.34 E-value=1.1e-11 Score=96.15 Aligned_cols=85 Identities=27% Similarity=0.490 Sum_probs=68.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEee--CCEEcC---CCCeeEeceEEecccceeEEEEEcccc-cCCC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL--DGFELP---TNNRFVIGQFVSGHGDVISHVNISHVT-VEDG 75 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~--~~~~l~---~~~~~~~~~~~~~~~~~~~~l~I~~~~-~~D~ 75 (286)
||.|...+....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+. .+.++.+. ..+....|.|.++. .+|+
T Consensus 92 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~~d~ 166 (190)
T 2wv3_A 92 APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFII-----NKENYTELNIVNLQITEDP 166 (190)
T ss_dssp CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEE-----ECSSEEEEEECSCCTTTSC
T ss_pred CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEe-----cCCCeeEEEEEeccccCCC
Confidence 6888888888899999999999999999999999999 787764 34555432 11222369999999 6999
Q ss_pred eEEEEEEEcCCEEEEE
Q psy15667 76 GEYACVAENRAGTCEI 91 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~~ 91 (286)
|.|+|.|.|..|....
T Consensus 167 G~Y~C~a~N~~g~~~~ 182 (190)
T 2wv3_A 167 GEYECNATNSIGSASV 182 (190)
T ss_dssp EEEEEEEECSSCEEEE
T ss_pred EEEEEEEEecCCccee
Confidence 9999999999987643
No 368
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.32 E-value=2.7e-12 Score=92.53 Aligned_cols=84 Identities=24% Similarity=0.282 Sum_probs=57.7
Q ss_pred eEeccccc-cccCCCcEEEEEEeec--CCCCeeEEeeCCEEcC-----CCCeeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 5 LTYSFIEQ-TLQPGPAVSLKCIASG--NPTPDIGWTLDGFELP-----TNNRFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 5 ~~~~~~~~-~~~~G~~~~l~C~~~g--~p~p~v~W~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
+.+.+.+. .+.+|++++|.|.+.| .|.+.+.|++++..+. ...+.... ..........|.|.+++.+|+|
T Consensus 10 v~i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~I~~v~~~DsG 87 (122)
T 3s35_X 10 VVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQS--GSEMKKFLSTLTIDGVTRSDQG 87 (122)
T ss_dssp EEEESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEE--ETTEEEEEEEEEESSCCGGGCE
T ss_pred EEEcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeecccccc--CCceeeEEEEEEECCCCcccCE
Confidence 34455554 8899999999999999 4557899999987542 11111000 0000011235999999999999
Q ss_pred EEEEEEEcCCEEEE
Q psy15667 77 EYACVAENRAGTCE 90 (286)
Q Consensus 77 ~Y~C~a~n~~g~~~ 90 (286)
.|+|.|.|..|...
T Consensus 88 ~Y~C~a~n~~g~~~ 101 (122)
T 3s35_X 88 LYTCAASSGLMTKK 101 (122)
T ss_dssp EEEEEEECSSCEEE
T ss_pred EEEEEEccCCCceE
Confidence 99999999988654
No 369
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.32 E-value=7e-11 Score=94.87 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=28.1
Q ss_pred eEeccccccccCCCcEEEEEEeecCC--CCeeEEeeC
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLD 39 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~ 39 (286)
+...+..+++.+|++++|.|.+.+.+ .+.+.|++.
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq 40 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRK 40 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEE
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEE
Confidence 44556777899999999999998654 467999975
No 370
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=4.4e-12 Score=88.55 Aligned_cols=76 Identities=24% Similarity=0.428 Sum_probs=58.1
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+. + |.+.+.|+|+|..+....++.+.... ....|.|.++..+|+|.|+|.|.| ...++.|
T Consensus 19 ~v~~G~~v~l~C~~~-~-~~~~v~W~k~g~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l 91 (103)
T 2edf_A 19 WVAPGEDVELRCELS-R-AGTPVHWLKDRKAIRKSQKYDVVCEG-TMAMLVIRGASLKDAGEYTCEVEA----SKSTASL 91 (103)
T ss_dssp EECTTSCEEECCEES-S-SSCCCCEEESSCBCCCSSSEEEEEET-TEEEEEESSCCTTTCSEEEEECSS----CEEEEEE
T ss_pred EEcCCCCEEEEEEEe-C-CCCcEEEEECCEEccCCCCEEEEECC-CEEEEEECCCCcccCEEEEEEEcc----CCcEEEE
Confidence 356777788888775 3 66789999999988776666655432 255799999999999999999999 3566667
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 92 ~V~ 94 (103)
T 2edf_A 92 HVE 94 (103)
T ss_dssp EEC
T ss_pred EEe
Confidence 663
No 371
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.31 E-value=2.4e-12 Score=90.50 Aligned_cols=76 Identities=22% Similarity=0.395 Sum_probs=54.8
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +.|.+ +.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|. ....++.|.
T Consensus 20 v~~G~~v~l~C~~~-~~~~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~~~l~ 94 (106)
T 2dlt_A 20 VKAAEQAVFKCEVS-DEKVT-GKWYKNGVEVRPSKRITISHV-GRFHKLVIDDVRPEDEGDYTFVPDGY--ALSLSAKLN 94 (106)
T ss_dssp EESSCCEECCCEES-CSSCE-EEEEESSCBCCCCSSCEEEEE-TTEEEEEESSCCTTTCSCEEEEEETS--CCCCCBCEE
T ss_pred EeCCCeEEEEEEEc-CCCcc-eEEEcCCEECcCCCCEEEEEe-CCEEEEEECCCCcCCCEEEEEEEccC--CceEEEEEE
Confidence 44566666666654 44555 999999998877666665543 23468999999999999999999998 334455555
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 95 V 95 (106)
T 2dlt_A 95 F 95 (106)
T ss_dssp E
T ss_pred E
Confidence 4
No 372
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.30 E-value=6.2e-12 Score=98.16 Aligned_cols=81 Identities=32% Similarity=0.542 Sum_probs=66.6
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
||.|...+.+..+.+|++++|.|.+.|.|.|.+.|++++..+..+.++.. .+. .|.|.++..+|+|.|+|.
T Consensus 113 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~------~~~---~L~i~~v~~~d~G~Y~C~ 183 (201)
T 3s97_C 113 PADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIST------SGA---VLKIFNIQLEDEGIYECE 183 (201)
T ss_dssp EEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEET------TTT---EEEECSCCGGGCEEEEEE
T ss_pred CCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecC------CCC---EEEEccCChhhCEEEEEE
Confidence 46677777788899999999999999999999999999998875544321 122 488999999999999999
Q ss_pred EEcCCEEEEE
Q psy15667 82 AENRAGTCEI 91 (286)
Q Consensus 82 a~n~~g~~~~ 91 (286)
|.|..|....
T Consensus 184 a~n~~g~~~~ 193 (201)
T 3s97_C 184 AENIRGKDKH 193 (201)
T ss_dssp EEETTEEEEE
T ss_pred EEecCCceee
Confidence 9999987643
No 373
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.30 E-value=3.7e-12 Score=98.09 Aligned_cols=121 Identities=13% Similarity=0.211 Sum_probs=88.9
Q ss_pred ccccCCCcEEEEEEeec--CCCCeeEEeeCCEEcC----------CCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 12 QTLQPGPAVSLKCIASG--NPTPDIGWTLDGFELP----------TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g--~p~p~v~W~~~~~~l~----------~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+.+.+|++++|.|...+ .|.+.|.|+|++..|. .+.|+.+ ..++ +|.|.+++.+|+|.|+
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~----~~~g----sL~I~~v~~~D~G~Y~ 77 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI----LANG----DLKIKNLTRDDSGTYN 77 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE----CTTS----CEEESSCCGGGCEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE----CCCC----cEEEcccccccCEEEE
Confidence 46789999999995433 6678999999997542 2344432 1122 3899999999999999
Q ss_pred EEEEcCCEEE--E----Ee----------------------cCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCee
Q psy15667 80 CVAENRAGTC--E----IT----------------------PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGI 131 (286)
Q Consensus 80 C~a~n~~g~~--~----~~----------------------~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~ 131 (286)
|.|.|..|.. . +. ..+.+++.+.|+|||+.+.... .+.|..+..+|+|.
T Consensus 78 C~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~---~~~i~~~~~~d~G~ 154 (176)
T 1hng_A 78 VTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLR---QKTMSYQWTNLRAP 154 (176)
T ss_dssp EEEEETTCCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEES---SSEEEEECSCCSSC
T ss_pred EEEEeCCCCEEEEEEEEEEEeCCCCCCEEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCC---cEEEEEEEccCCeE
Confidence 9999877653 1 11 1123457899999999875322 25666888999999
Q ss_pred EEEEEEcCCcce
Q psy15667 132 YQCIARRSDGDV 143 (286)
Q Consensus 132 Y~C~a~~~~g~~ 143 (286)
|+|.|.|..|..
T Consensus 155 Y~C~a~N~~g~~ 166 (176)
T 1hng_A 155 FKCKAVNRVSQE 166 (176)
T ss_dssp EEEEEEETTEEE
T ss_pred EEEEEEecCCCc
Confidence 999999998865
No 374
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.30 E-value=8e-12 Score=87.52 Aligned_cols=74 Identities=23% Similarity=0.459 Sum_probs=56.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC-CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
+.+|+.+.|.|.+ +.|.+.+.|+|+|..+... .++.+... .....|.|.++..+|+|.|+|.|.| ...++.|
T Consensus 28 v~~G~~v~L~C~~--~~p~~~v~W~k~g~~l~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~~~l 100 (104)
T 1pd6_A 28 VSKGHKIRLTVEL--ADHDAEVKWLKNGQEIQMSGSKYIFESI-GAKRTLTISQCSLADDAAYQCVVGG----EKCSTEL 100 (104)
T ss_dssp EETTSCEEEEEEC--SSSSSCCEEEESSSEECCCSSSSEEEEE-TTEEEEEECSCSSSSCEEEEEEETT----EEECCEE
T ss_pred EecCCCEEEEEEE--cCCCCEEEEEECCEECCCCCCeEEEEec-CCEEEEEECCCCcccCEEEEEEECC----CcEEEEE
Confidence 5678888888877 4677889999999988766 55555432 2245899999999999999999954 4455666
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 101 ~V 102 (104)
T 1pd6_A 101 FV 102 (104)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 375
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.29 E-value=5.3e-11 Score=83.49 Aligned_cols=93 Identities=20% Similarity=0.339 Sum_probs=63.1
Q ss_pred cCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC
Q psy15667 160 LIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF 239 (286)
Q Consensus 160 ~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~ 239 (286)
....+.+.+|++++|.|.+.+.|.+.+.|.+... .+.|..++... ...
T Consensus 12 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~-------------------------------~~~~~~~~~~~-~~~ 59 (108)
T 3m45_A 12 LTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQ-------------------------------QTLYFDDKKAL-RDN 59 (108)
T ss_dssp ECCCEEEETTSCEEEEEEESSCSSCCEEEECTTC-------------------------------CEEEETTEECS-CCT
T ss_pred cCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCC-------------------------------ceEEEcCCccc-ccC
Confidence 3445677788888888888877777777765221 02233332222 222
Q ss_pred CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 240 PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 240 ~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
++.+.........|.|.++..+|+|.|+|.|.| .|....++.|.|
T Consensus 60 r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V 104 (108)
T 3m45_A 60 RIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTV 104 (108)
T ss_dssp TEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEE
T ss_pred cEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEE
Confidence 343332223466899999999999999999999 898899988887
No 376
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.29 E-value=1.1e-11 Score=97.93 Aligned_cols=79 Identities=34% Similarity=0.619 Sum_probs=67.2
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC-CCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT-NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|.|...+....+.+|+.++|.|.+.|.|.|.+.|++++..+.. ..++.+ ..+ .|.|.++..+|+|.|+|.
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~------~~~---~L~i~~v~~~d~G~Y~C~ 181 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL------KDG---FLQIENSREEDQGKYECV 181 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE------ETT---EEEECSCCGGGCEEEEEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc------cCC---eEEEccCChhhCEEEEEE
Confidence 7888888888899999999999999999999999999999875 344422 112 488999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 182 a~N~~G~~~ 190 (212)
T 2yd1_A 182 AENSMGTEH 190 (212)
T ss_dssp EEETTEEEE
T ss_pred eecCCCcee
Confidence 999998764
No 377
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.29 E-value=1.4e-11 Score=100.29 Aligned_cols=121 Identities=17% Similarity=0.109 Sum_probs=50.2
Q ss_pred CCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceec-CCceEEecCCCEEEEeeEeeec-----CCeEEEEEcCCcccc
Q psy15667 124 VGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRL-IPKVTAIDGEGLSIKCPVAGYP-----IEEVHWEKVPPKIES 197 (286)
Q Consensus 124 v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~-~~~~~~~~g~~~~l~c~~~~~p-----~~~v~w~~~~~~~~~ 197 (286)
+.++|+|.|+|.|. |... ....+.+...+.+.. ...+.+.+|++++|.|.+.+.| .+.+.|.+....
T Consensus 11 v~~~dsg~Y~C~a~---g~~~-~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g--- 83 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSF-TNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPG--- 83 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTT---
T ss_pred ecCCccEEEEEcCc---hhhh-hhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCC---
Confidence 68899999999998 3322 122232222333332 3345666777777777777665 255666542100
Q ss_pred cccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC-CCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 198 FAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL-SPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 198 ~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
.+...+. +...... ....++.+.. ......|.|.+++.+|+|.|+|.|.|..+.
T Consensus 84 -----------------------~~~~~~~-~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 138 (254)
T 2c1o_A 84 -----------------------QSPKRLI-YLVSKLDSGDPDRFTGSG-SGTDFTLKISRVEAEDLGIYYCVQGSHFPP 138 (254)
T ss_dssp -----------------------SCCEEEE-ETTTEECTTCCTTEEEEE-ETTEEEEEESSCCGGGCSEEEEEECSSSSC
T ss_pred -----------------------CCceEEE-EeccccCCCccceEEEec-CCCEEEEEECcCCcccCEEEEEEEEcCcce
Confidence 0000000 0000000 0112333322 223458999999999999999999998653
No 378
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.29 E-value=4.4e-10 Score=90.16 Aligned_cols=156 Identities=16% Similarity=0.240 Sum_probs=97.5
Q ss_pred cccCCCeEEEEEEEcCCEEEEEecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeE
Q psy15667 70 VTVEDGGEYACVAENRAGTCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAE 149 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~~g~~~~~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~ 149 (286)
+...|.-..+|.+.... | ...+..++|+|||.++.. ....|.|......|+|.|+|.+.+..|-.. .+..
T Consensus 14 i~~GdsVTLTatVaGGk------P-~pspyTYqWyKDG~~IsG--aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~-tSs~ 83 (304)
T 3shs_A 14 FLAGDGFTLTATVAGDE------P-LPSNLTYTWTKDDQPHEN--NTATLTVADATSENAGSYKVTVQDTDTMTS-VESE 83 (304)
T ss_dssp BCTTCCEEEEEEEEESS------S-CCCCEEEEEEETTEECSC--CSSEEEESSCCGGGCEEEEEEEEETTTCCE-EECC
T ss_pred ccCCCCEEEEEEecCCC------C-CCCCceEEEEECCccccC--CcceEEeeeccccCCeEEEEEEEECCCCee-eeee
Confidence 45566667888765531 0 011468999999988765 335799999999999999999999876432 2223
Q ss_pred EEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEee--ecCCC-----
Q psy15667 150 LQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGV--THGDP----- 222 (286)
Q Consensus 150 l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~--~~~~p----- 222 (286)
+.|...+. +.+.... |. . ..+..|..+.|.+.+ +.|.|
T Consensus 84 VtVT~~a~----------------l~i~it~-P~-s-----------------~~vssg~sVtL~aTVt~SGGtppA~~~ 128 (304)
T 3shs_A 84 VFLMEEAE----------------LIVNITE-PQ-H-----------------FYVSSQTDVELHATVKFSGGKTPADNY 128 (304)
T ss_dssp CEEECBCC----------------EEEEESS-CS-E-----------------EEECSSCCEEEEEEEEETTSCCSSTTC
T ss_pred EEEeccCc----------------eeEEecC-CC-c-----------------eeccCCCeEEEEEEEeccCCCCcccCC
Confidence 33221110 0111100 10 0 002234555666655 55555
Q ss_pred CCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 223 PLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 223 ~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
..+++|+|++..+.. ...|.+......++|.|+|.+.|..+..-.++.
T Consensus 129 ~yTYQWyKngt~Isg------------Aq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~ 176 (304)
T 3shs_A 129 ELHYSWSKGEDVIDT------------TQDITIQEFTADKNGVYTVKVWGESEDSAASAS 176 (304)
T ss_dssp CCEEEEEETTEEEES------------SSEEEECSCCGGGCEEEEEEEESSSGGGCEEEE
T ss_pred CceeEEeeCCeEccC------------ccccceeeEEecCCeEEEEEEEcCCCCcccccc
Confidence 479999999986532 125678888899999999999999774444433
No 379
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.28 E-value=7.3e-12 Score=107.61 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=30.0
Q ss_pred ccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEc
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFEL 43 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l 43 (286)
.+.++++.+|++++|.|.+.| |.|.+.|++++..+
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~ 286 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQ 286 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCB
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCee
Confidence 345668999999999999999 99999999987654
No 380
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.28 E-value=1.1e-11 Score=96.66 Aligned_cols=77 Identities=25% Similarity=0.310 Sum_probs=63.3
Q ss_pred ccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcc-cccCCCeEEEEEEEcCCEE
Q psy15667 10 IEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISH-VTVEDGGEYACVAENRAGT 88 (286)
Q Consensus 10 ~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~-~~~~D~G~Y~C~a~n~~g~ 88 (286)
....+.+|+.+.|.|.+.|.|.|.+.|++++..+..+.++.+.. .+ ....|.|.+ +..+|+|.|+|.|.|..|.
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~----~~-~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~ 186 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIV----TR-SFTSLVFPNGVERKDAGFYVVCAKNRFGI 186 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEE----CS-SEEEEECTTCCCGGGCEEEEEEEEETTEE
T ss_pred CeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEE----cC-CceEEEEeCCCCcccCEeEEEEEEeCCCc
Confidence 44568899999999999999999999999999998777765421 11 123689999 9999999999999999987
Q ss_pred EEE
Q psy15667 89 CEI 91 (286)
Q Consensus 89 ~~~ 91 (286)
.+.
T Consensus 187 ~~~ 189 (197)
T 2j8h_A 187 DQK 189 (197)
T ss_dssp EEE
T ss_pred EeE
Confidence 643
No 381
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.28 E-value=1.9e-11 Score=94.52 Aligned_cols=74 Identities=31% Similarity=0.689 Sum_probs=61.8
Q ss_pred cccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 11 EQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 11 ~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
+..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+.++... ... ..|.|.++..+|+|.|+|.|.|..|...
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~----~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 179 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK----GSN---TELTVRNIINSDGGPYVCRATNKAGEDE 179 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE----TTT---TEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe----cCC---CEEEEcCCChhhCeeEEEEEEeCCCcee
Confidence 457889999999999999999999999999999877665431 112 2488999999999999999999998765
Q ss_pred E
Q psy15667 91 I 91 (286)
Q Consensus 91 ~ 91 (286)
.
T Consensus 180 ~ 180 (189)
T 2v5t_A 180 K 180 (189)
T ss_dssp E
T ss_pred E
Confidence 3
No 382
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=1.2e-11 Score=87.73 Aligned_cols=74 Identities=23% Similarity=0.350 Sum_probs=56.8
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. .|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.| ...++.|.
T Consensus 25 ~~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~ 97 (113)
T 2cpc_A 25 AVRLERVVLTCELC--RPWAEVRWTKDGEEVVESPALLLQKE-DTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVT 97 (113)
T ss_dssp EETTCCEEEEEEES--CTTCCCEEEETTEECCCBTTBEEEEC-SSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEE
T ss_pred EEcCCeEEEEEEec--CCCCeEEEEECCEECccCCCEEEEEC-CCEEEEEECCCCcccCEEEEEEEec----CcEEEEEE
Confidence 44677788888763 67788999999999877666655443 2346899999999999999999999 44566666
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 98 V 98 (113)
T 2cpc_A 98 V 98 (113)
T ss_dssp E
T ss_pred E
Confidence 5
No 383
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2.8e-12 Score=88.37 Aligned_cols=71 Identities=25% Similarity=0.585 Sum_probs=54.7
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc--eeeEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ--ARYSS 281 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~--~~~~~ 281 (286)
.+.+|+.+.|.|.+. +.|.+.+.|+|++..+.... ...|.|.++..+|+|.|+|.|.|..|. .+..+
T Consensus 21 ~v~~G~~v~l~C~~~-g~p~~~v~W~k~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~ 89 (96)
T 2ens_A 21 AVAPGGTVTLTCEVP-AQPSPQIHWMKDGVPLPLPP----------SPVLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89 (96)
T ss_dssp EECTTCEEEEECCCS-SCSSCCCCCEESSSBCSSCC----------CSEEEEESCCTTTCEEEECEECCSSCCCEECCCE
T ss_pred EEcCCCeEEEEEEEc-cCCCCEEEEEECCEECcCCC----------CCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEE
Confidence 366788888888774 67778999999998775431 357999999999999999999997654 34445
Q ss_pred EEEE
Q psy15667 282 KLQV 285 (286)
Q Consensus 282 ~L~V 285 (286)
.|.|
T Consensus 90 ~v~V 93 (96)
T 2ens_A 90 SISI 93 (96)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 384
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=96.92 Aligned_cols=74 Identities=24% Similarity=0.457 Sum_probs=64.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+....+ ..|.|.+++.+|+|.|+|.
T Consensus 118 ~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C~ 183 (218)
T 3k0w_A 118 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK--------------KLYMVPYVDLEHQGTYWCH 183 (218)
T ss_dssp SCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS--------------SEEEESSCCGGGCEEEEEE
T ss_pred CceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC--------------CEEEEeecChhcCEEEEEE
Confidence 36777788888999999999999999999999999999998865422 1488999999999999999
Q ss_pred EEcCCEEE
Q psy15667 82 AENRAGTC 89 (286)
Q Consensus 82 a~n~~g~~ 89 (286)
|.|..|..
T Consensus 184 a~n~~g~~ 191 (218)
T 3k0w_A 184 VYNDRDSQ 191 (218)
T ss_dssp EECSSCEE
T ss_pred EEcCCCCc
Confidence 99987764
No 385
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.26 E-value=1.8e-11 Score=94.92 Aligned_cols=81 Identities=33% Similarity=0.587 Sum_probs=67.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+....+.+|+++.|.|.+.|.|.+.+.|++++..+..+.++.+. ..+ .|.|.++..+|+|.|+|.
T Consensus 100 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~----~~~----~L~i~~~~~~d~G~Y~C~ 171 (192)
T 2iep_A 100 KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVL----ESG----SLRIHNVQKEDAGQYRCV 171 (192)
T ss_dssp EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEEC----TTS----CEEESSCCGGGCEEEEEE
T ss_pred CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEe----cCC----cEEEecCChhhCEEEEEE
Confidence 466666677778999999999999999999999999999999877665432 122 388999999999999999
Q ss_pred EEcCCEEEE
Q psy15667 82 AENRAGTCE 90 (286)
Q Consensus 82 a~n~~g~~~ 90 (286)
|.|..|...
T Consensus 172 a~n~~g~~~ 180 (192)
T 2iep_A 172 AKNSLGTAY 180 (192)
T ss_dssp EEETTEEEE
T ss_pred EEcCCCcEE
Confidence 999988763
No 386
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.26 E-value=1.3e-11 Score=89.26 Aligned_cols=80 Identities=21% Similarity=0.395 Sum_probs=60.5
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEE-c-------CCCCeeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFE-L-------PTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~-l-------~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
|...+.+.++.+|++++|.|.+.+.|.+.+.|++++.. + ..+.++.+.. ......+|.|.+++.+|+|
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~~L~I~~v~~~DsG 79 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLH----HSANQLSITVPNVTLQDEG 79 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEE----EETTEEEEEESSCCGGGCE
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEe----CCCCEEEEEECCCChHHCE
Confidence 44556677899999999999999999999999986543 2 1445554422 1111246999999999999
Q ss_pred EEEEEEEcCCEEE
Q psy15667 77 EYACVAENRAGTC 89 (286)
Q Consensus 77 ~Y~C~a~n~~g~~ 89 (286)
.|+|.|.|. |..
T Consensus 80 ~Y~C~a~n~-g~~ 91 (124)
T 3rbg_A 80 VYKCLHYSD-SVS 91 (124)
T ss_dssp EEEEEEESS-SEE
T ss_pred EEEEEEEcC-CCC
Confidence 999999998 654
No 387
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.26 E-value=3e-11 Score=109.75 Aligned_cols=86 Identities=23% Similarity=0.365 Sum_probs=74.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
.|.|...+.+..+.+|+++.|.|.+.|.|.|.|+|+|++.+|..+.++.+.. .++ ..+|.|.++..+|+|.|+|+
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~----~~~-~~~L~I~~~~~~D~G~Yt~~ 556 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRY----NGN-DYGLTINRVKGDDKGEYTVR 556 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEE----ETT-EEEEEECSCCGGGCEEEEEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEE----cCC-EEEEEEcCCCcccCcEEEEE
Confidence 4788888888999999999999999999999999999999999888887632 222 34699999999999999999
Q ss_pred EEcCCEEEEEe
Q psy15667 82 AENRAGTCEIT 92 (286)
Q Consensus 82 a~n~~g~~~~~ 92 (286)
|.|..|..+..
T Consensus 557 A~N~~G~~~~~ 567 (573)
T 3uto_A 557 AKNSYGTKEEI 567 (573)
T ss_dssp EEETTEEEEEE
T ss_pred EEeCCCcEEEE
Confidence 99999987643
No 388
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.26 E-value=1.4e-11 Score=96.74 Aligned_cols=80 Identities=33% Similarity=0.638 Sum_probs=61.6
Q ss_pred EEEEcccccCCCeEEEEEEEcCCE--E----EEE---------------------------ec-CCCCCeeEEEeeCCcc
Q psy15667 64 HVNISHVTVEDGGEYACVAENRAG--T----CEI---------------------------TP-YDSGPYLIAWFKDGRQ 109 (286)
Q Consensus 64 ~l~I~~~~~~D~G~Y~C~a~n~~g--~----~~~---------------------------~~-~~~~~~~~~W~~~g~~ 109 (286)
.|.|.+++.+|+|.|+|.+.|..| . ..+ .. ...+++.+.|+++|..
T Consensus 69 ~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~ 148 (209)
T 1nbq_A 69 GITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIV 148 (209)
T ss_dssp EEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCC
T ss_pred EEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCee
Confidence 488999999999999999998643 1 111 00 1123468999999988
Q ss_pred CcCCC---------------CcceEEEccCCCCCCeeEEEEEEcCCcce
Q psy15667 110 IPGRT---------------SSTSLVINPVGREDRGIYQCIARRSDGDV 143 (286)
Q Consensus 110 l~~~~---------------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~ 143 (286)
+.... ....|.|.++..+|+|.|+|.|.|..|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 149 MPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp CCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred CCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 75321 34689999999999999999999998876
No 389
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.26 E-value=4.8e-11 Score=84.67 Aligned_cols=74 Identities=24% Similarity=0.399 Sum_probs=57.1
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +. |.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|.| |....++.|.
T Consensus 31 v~~G~~v~l~C~~~-~~--p~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~ 102 (113)
T 2edh_A 31 ATEGATAVLRCELS-KM--APVEWWKGHETLRDGDRHSLRQD-GARCELQIRGLVAEDAGEYLCMC----GKERTSAMLT 102 (113)
T ss_dssp ECTTSCEEEEEEES-SC--CCCEEEESSSBCCCSSSEEEEEE-TTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEE
T ss_pred EeCCCeEEEEEEEC-CC--CcEEEEECCEECCCCCcEEEEEC-CCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEE
Confidence 55677777777764 32 67899999999877766665543 22458999999999999999999 6777788888
Q ss_pred EC
Q psy15667 285 VK 286 (286)
Q Consensus 285 V~ 286 (286)
|+
T Consensus 103 V~ 104 (113)
T 2edh_A 103 VR 104 (113)
T ss_dssp EC
T ss_pred Ee
Confidence 74
No 390
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.26 E-value=1.6e-12 Score=86.10 Aligned_cols=60 Identities=27% Similarity=0.552 Sum_probs=49.0
Q ss_pred cccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEccc-ccCCCeEEEEEEEc
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHV-TVEDGGEYACVAEN 84 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~-~~~D~G~Y~C~a~n 84 (286)
+..+++..|++|+|+|.+.|+|. |+|+|||.+|+.+. .+ .|.|.++ ..+|+|.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~~----------~~----~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQKH----------DK----HLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTCC----------SS----CCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCCC----------CC----EEEECccCccCcCEEEEEEEcc
Confidence 44567789999999999999983 99999999986431 11 3789996 78999999999875
No 391
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.25 E-value=3.5e-11 Score=97.28 Aligned_cols=81 Identities=20% Similarity=0.381 Sum_probs=61.3
Q ss_pred EEEEcccccCCCeEEEEEEEcCCE---------EEEEecC-------------------------------CCCCeeEEE
Q psy15667 64 HVNISHVTVEDGGEYACVAENRAG---------TCEITPY-------------------------------DSGPYLIAW 103 (286)
Q Consensus 64 ~l~I~~~~~~D~G~Y~C~a~n~~g---------~~~~~~~-------------------------------~~~~~~~~W 103 (286)
.|.|.+++.+|+|.|+|.|.|..+ .+.+... ..+++.+.|
T Consensus 91 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W 170 (250)
T 2fbo_J 91 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTW 170 (250)
T ss_dssp CEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEE
T ss_pred eEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEE
Confidence 489999999999999999998655 2222110 113458999
Q ss_pred eeCCccCcCC------------------------C-----CcceEEEccCCCCCCeeEEEEEEcCCccee
Q psy15667 104 FKDGRQIPGR------------------------T-----SSTSLVINPVGREDRGIYQCIARRSDGDVA 144 (286)
Q Consensus 104 ~~~g~~l~~~------------------------~-----~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~ 144 (286)
+|++..+... . ....|.|.++..+|+|.|+|.|.|..|...
T Consensus 171 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g 240 (250)
T 2fbo_J 171 YTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELD 240 (250)
T ss_dssp EEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGG
T ss_pred EeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccC
Confidence 9998876431 1 226899999999999999999999777543
No 392
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.25 E-value=2e-11 Score=94.62 Aligned_cols=78 Identities=19% Similarity=0.352 Sum_probs=64.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC--CCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT--NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.|...+....+.+|+++.|.|.+.|+|.|.+.|++++..+.. +.++... .++ .|.|.++..+|+|.|+
T Consensus 100 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~----~~~----~L~i~~~~~~d~G~Y~ 171 (191)
T 1epf_A 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL----SNN----YLQIRGIKKTDEGTYR 171 (191)
T ss_dssp CSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEEC----TTS----CEEETTCCGGGCEEEE
T ss_pred CceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEe----cCC----eEEECCCChhhCEEEE
Confidence 67888888888999999999999999999999999999998853 3344321 122 3889999999999999
Q ss_pred EEEEcCCE
Q psy15667 80 CVAENRAG 87 (286)
Q Consensus 80 C~a~n~~g 87 (286)
|.|.|..+
T Consensus 172 C~a~n~~~ 179 (191)
T 1epf_A 172 CEGRILAR 179 (191)
T ss_dssp EEEEEGGG
T ss_pred EEEEEecc
Confidence 99999763
No 393
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=85.58 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=52.2
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccc
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
+.+|+.+.|.|.+. +.|.+ +.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|..+.
T Consensus 22 v~~G~~v~l~C~~~-~~p~~-v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~ 90 (104)
T 2e6p_A 22 FTTSERVVLTCELS-RVDFP-ATWYKDGQKVEESELLVVKMD-GRKHRLILPEAKVQDSGEFECRTEGVSAF 90 (104)
T ss_dssp EESSSCEECCEECS-STTCC-CEEEETTEECCCBTTBEEEEE-TTEEEEEESSCCTTTCEEEEEECSSCCCC
T ss_pred EeCCCcEEEEEEec-CCCCc-cEEeeCCEECCCCCCEEEEeC-CCEEEEEECCCChhhCEEEEEEECCceEE
Confidence 45666667777654 45566 899999999877666655432 23568999999999999999999998653
No 394
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=3.7e-11 Score=84.97 Aligned_cols=77 Identities=13% Similarity=0.228 Sum_probs=57.9
Q ss_pred CCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC----------CceeeecCCCeeeEEEcccCCCCCeEEEEEEEe
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----------PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASN 272 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~----------~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N 272 (286)
..+.+|+.+.|.|.++. .+.+.|+|||+.+..+. ++.+.. .+....|.|.++..+|+|.|+|...+
T Consensus 18 ~~v~eG~~a~f~C~vs~---~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~-~g~~~~L~I~~v~~~D~G~Y~~~~~~ 93 (112)
T 2e6q_A 18 VQVYDGEDAVFSLDLST---IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQ-KGLQHRLILHAVKHQDSGALVGFSCP 93 (112)
T ss_dssp EEEETTCEEEEEEEESS---CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECC-BTTEEEEEEESCCSTTCSEEEEEEET
T ss_pred eEEcCCCcEEEEEEECC---CCeEEEEECCEECccCcccccccccccEEEEEe-CCcEEEEEECCCCHHHCccEEEEEEC
Confidence 34678888888888863 67899999999998775 554433 23356899999999999999874443
Q ss_pred cccceeeEEEEEEC
Q psy15667 273 TAAQARYSSKLQVK 286 (286)
Q Consensus 273 ~~g~~~~~~~L~V~ 286 (286)
....++.|.|+
T Consensus 94 ---~~~ssA~L~V~ 104 (112)
T 2e6q_A 94 ---GVQDSAALTIQ 104 (112)
T ss_dssp ---TEEEEEEEEEE
T ss_pred ---CeeEEEEEEEe
Confidence 34568888874
No 395
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.24 E-value=4.4e-11 Score=93.11 Aligned_cols=77 Identities=22% Similarity=0.421 Sum_probs=64.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC-eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+.+..+.+|+.+.|.|.+.|.|.| .+.|++++..+...... .. ...|.|.+++ |+|.|+|
T Consensus 106 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--------~~--~~~L~i~~~~--d~G~Y~C 173 (195)
T 2c5d_C 106 LPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--------GP--QRSLHVPGLN--KTSSFSC 173 (195)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--------SC--CEEEEECCCS--SCEEEEE
T ss_pred CCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--------CC--CCeEEEcccc--cCceEEE
Confidence 6888888888899999999999999999999 99999999988754332 01 1248899987 8999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 174 ~a~N~~g~~~ 183 (195)
T 2c5d_C 174 EAHNAKGVTT 183 (195)
T ss_dssp EEEETTEEEE
T ss_pred EEEcCCCceE
Confidence 9999998764
No 396
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.24 E-value=9e-12 Score=98.72 Aligned_cols=81 Identities=31% Similarity=0.495 Sum_probs=65.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEe-ecCCCCeeEEeeCCEEcCCC--------CeeEeceEEecccceeEEEEEccccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFELPTN--------NRFVIGQFVSGHGDVISHVNISHVTV 72 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~l~~~--------~~~~~~~~~~~~~~~~~~l~I~~~~~ 72 (286)
||.|...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+... .++.. . ... .|.|.+++.
T Consensus 108 ~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~----~-~~~---~L~i~~~~~ 179 (217)
T 2vr9_A 108 RDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI----V-DGG---NLLISNVEP 179 (217)
T ss_dssp CCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE----E-TTT---EEEESSCCS
T ss_pred CCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe----c-CCC---cEEEeeCCH
Confidence 5566666777789999999999998 89999999999999998732 22211 1 111 488999999
Q ss_pred CCCeEEEEEEEcCCEEEE
Q psy15667 73 EDGGEYACVAENRAGTCE 90 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g~~~ 90 (286)
+|+|.|+|.|.|..|...
T Consensus 180 ~d~G~Y~C~a~N~~G~~~ 197 (217)
T 2vr9_A 180 IDEGNYKCIAQNLVGTRE 197 (217)
T ss_dssp TTCEEEEEEEEETTEEEE
T ss_pred HHCeEEEEEEEcccceec
Confidence 999999999999999765
No 397
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.24 E-value=1.5e-11 Score=95.26 Aligned_cols=78 Identities=22% Similarity=0.450 Sum_probs=62.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcC--CCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELP--TNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~--~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+|.|...+....+.+|++++|.|.+.|.|.|.+.|++++..+. .+.++... ..+ .|.|.+++.+|+|.|+
T Consensus 96 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~----~~~----~L~i~~v~~~d~G~Y~ 167 (189)
T 2v44_A 96 KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML----ANN----NLQILNINKSDEGIYR 167 (189)
T ss_dssp CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC----TTS----CEEETTCCGGGCEEEE
T ss_pred CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe----cCC----cEEEEEcCcccCeEEE
Confidence 5677767777889999999999999999999999999998875 34455331 122 4889999999999999
Q ss_pred EEEEcCCE
Q psy15667 80 CVAENRAG 87 (286)
Q Consensus 80 C~a~n~~g 87 (286)
|.|.|..|
T Consensus 168 C~a~n~~~ 175 (189)
T 2v44_A 168 CEGRVEAR 175 (189)
T ss_dssp EEEEETTT
T ss_pred EEEEcccc
Confidence 99999763
No 398
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=1.9e-11 Score=85.04 Aligned_cols=74 Identities=32% Similarity=0.558 Sum_probs=56.7
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. .|.+.+.|+|+|..+....++.+... .....|.|.++..+|+|.|+|.|.|. ..++.|.
T Consensus 23 v~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~~~----~~~~~l~ 95 (102)
T 2eo1_A 23 AEAGASATLSCEVA--QAQTEVTWYKDGKKLSSSSKVRVEAV-GCTRRLVVQQAGQAEAGEYSCEAGGQ----QLSFRLQ 95 (102)
T ss_dssp EETTCCEEECCBCS--CSSSCCEEEETTEECCCCSSEEEEEE-TTEEEEEETTCCTTTCSCEEEEETTE----ECCEEEE
T ss_pred EeCCCcEEEEEEec--CCCCceEEEECCEECCCCCCEEEEEc-CCEEEEEECCCCcccCEEEEEEcCCC----cEEEEEE
Confidence 56788888888775 67789999999999877666655432 23468999999999999999999654 3445665
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 96 V 96 (102)
T 2eo1_A 96 V 96 (102)
T ss_dssp E
T ss_pred E
Confidence 5
No 399
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.23 E-value=3.5e-11 Score=87.00 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=32.5
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
...|.|.+++.+|+|.|+|.|.|. |.....+.|.|
T Consensus 65 ~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V 99 (124)
T 3rbg_A 65 QLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIV 99 (124)
T ss_dssp EEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEE
T ss_pred EEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEE
Confidence 568999999999999999999999 99999988887
No 400
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.23 E-value=2.4e-10 Score=93.86 Aligned_cols=76 Identities=22% Similarity=0.418 Sum_probs=43.7
Q ss_pred CCCeEEEEEeeecCCC-CCeEEEEeCCeeCCCCCC-c-eeeec-C--CCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 207 EGARTRVICGVTHGDP-PLTIRWLKDGKPLSPRFP-V-NVSDL-D--SFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 207 ~g~~~~l~c~~~~~~p-~~~~~W~~~g~~~~~~~~-~-~~~~~-~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
+|+.+.|.|.+....| ++.+.| ++..+..... . ..... . .....|.|.....+| |.|+|.+.|..+.....
T Consensus 182 ~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 258 (267)
T 3u1s_H 182 SGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 258 (267)
T ss_dssp ETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEE
T ss_pred CCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceE
Confidence 4566666666554334 456777 4443322100 0 00000 0 113468898888889 99999999998776665
Q ss_pred EEEEE
Q psy15667 281 SKLQV 285 (286)
Q Consensus 281 ~~L~V 285 (286)
..+.+
T Consensus 259 ~~~~~ 263 (267)
T 3u1s_H 259 KKVEP 263 (267)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 55543
No 401
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.23 E-value=7.1e-11 Score=91.03 Aligned_cols=85 Identities=21% Similarity=0.403 Sum_probs=66.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCC-CCeeEEee---CCE-EcCC--CCeeEeceEEecccceeEEEEEcccc-cC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNP-TPDIGWTL---DGF-ELPT--NNRFVIGQFVSGHGDVISHVNISHVT-VE 73 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-~p~v~W~~---~~~-~l~~--~~~~~~~~~~~~~~~~~~~l~I~~~~-~~ 73 (286)
||.|...+....+.+|++++|.|.+.|+| .|.+.|++ ++. .+.. +.++.+.. .+ ....|.|.+++ .+
T Consensus 83 ~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~L~i~~v~~~~ 157 (184)
T 3b5h_A 83 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSS----SQ-GRSELHIENLNMEA 157 (184)
T ss_dssp SCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEE----ET-TEEEEEECSCCTTT
T ss_pred CCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEe----cC-CeeEEEEeeccccc
Confidence 67888777777899999999999999999 89999999 554 4432 24554321 12 22469999999 89
Q ss_pred CCeEEEEEEEcCCEEEEE
Q psy15667 74 DGGEYACVAENRAGTCEI 91 (286)
Q Consensus 74 D~G~Y~C~a~n~~g~~~~ 91 (286)
|+|.|+|.|.|..|....
T Consensus 158 d~G~Y~C~a~N~~g~~~~ 175 (184)
T 3b5h_A 158 DPGQYRCNGTSSKGSDQA 175 (184)
T ss_dssp SSEEEEEEEEETTEEEEE
T ss_pred cCceEEEEEEeCCCcceE
Confidence 999999999999987653
No 402
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=3e-12 Score=89.08 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=49.1
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC----CceeeecCCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
+.+|+.+.|.|.+. +.| +.+.|+|+|..+.... ++.+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 20 v~~G~~v~l~C~~~-~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 89 (101)
T 2edk_A 20 VFVGDRVEMAVEVS-EEG-AQVMWMKNGVELTREDSFKARYRFKK-DGKRHILIFSDVVQEDRGRYQVITNGG 89 (101)
T ss_dssp EESSCCCBCCEEES-CSS-CCCEEEESSCBCCCSCCSSCCCEEEE-CSSEEEEECSSCCGGGCSBEEEECSSC
T ss_pred EcCCCCEEEEEEEe-CCC-CEEEEEECCEECCCCCCcceeEEEEE-CCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 45666677777664 445 7899999999887655 344443 233567999999999999999999983
No 403
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.22 E-value=1.9e-10 Score=89.42 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=66.8
Q ss_pred EEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCccccc
Q psy15667 119 LVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESF 198 (286)
Q Consensus 119 l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~ 198 (286)
+.|.+++ +|.+.|.|.+.... ......+.|.|+..|.......
T Consensus 54 ~~ls~vs-~d~~~~~C~~~c~~-~~~~~~v~l~Vy~~P~~v~i~~----------------------------------- 96 (196)
T 3bn3_B 54 RQLVDIR-EPETQPVCFFRCAR-RTLQARGLIRTFQRPDRVELMP----------------------------------- 96 (196)
T ss_dssp EEEEEEC-SSEECCEEEEEETT-EEEEEECEEEEEBCCCCCEECC-----------------------------------
T ss_pred EEEEEEc-cCCCceEEEEECCC-CceEEEEEEEEecCCCcCEEcc-----------------------------------
Confidence 4556666 66666777765532 3334567777776653211000
Q ss_pred ccccCCCCCCCeEEEEEeeecCCCCCe--EEEEeCCeeCCCCCCc-eeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc
Q psy15667 199 AFPFDGLPEGARTRVICGVTHGDPPLT--IRWLKDGKPLSPRFPV-NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA 275 (286)
Q Consensus 199 ~~~~~~~~~g~~~~l~c~~~~~~p~~~--~~W~~~g~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 275 (286)
....+.+|+.+.|.|.+..+.|... ++|+|+++.+...... ..........++.+.....+|...|+|.|.|.++
T Consensus 97 --~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 97 --LPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp --CCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred --CCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 0112557788888888777677655 7999999877321100 0000001124455554444445599999999877
No 404
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.22 E-value=8.2e-11 Score=90.46 Aligned_cols=75 Identities=24% Similarity=0.406 Sum_probs=63.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC-eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
||.|...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+..... . ...|.|.++ +|+|.|+|
T Consensus 98 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----------~--~~~L~i~~~--~d~G~Y~C 163 (182)
T 1rhf_A 98 VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----------S--PSVLNVTGV--TQSTMFSC 163 (182)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----------S--SEEEEECCC--SSCEEEEE
T ss_pred CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----------C--ceEEEEecc--ccCeEEEE
Confidence 7888888888899999999999999999999 9999999998854321 1 124889988 59999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 164 ~a~N~~g~~~ 173 (182)
T 1rhf_A 164 EAHNLKGLAS 173 (182)
T ss_dssp EEEETTEEEE
T ss_pred EEECCCCCcc
Confidence 9999998764
No 405
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.22 E-value=6.9e-11 Score=93.65 Aligned_cols=79 Identities=27% Similarity=0.436 Sum_probs=58.6
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC--CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF--PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSK 282 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~ 282 (286)
+.+|+.+.|.|.+. |.|.+.+.|+|+|..+.... ++.+... .....|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 30 ~~~G~~v~l~C~~~-g~p~p~i~W~~~g~~l~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 107 (215)
T 3mtr_A 30 TWEGNQVNITCEVF-AYPSATISWFRDGQLLPSSNYSNIKIYNT-PSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107 (215)
T ss_dssp ECTTCCEEEEEEEE-EESCCEEEEEETTEESSCSSSCSEEEEEE-TTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EECCCCEEEEEEEe-ecCCCEEEEEECCeECCCCCCccEEEecC-CCeeEEEEecCChhhCeEEEEEEEECCCceEEEEE
Confidence 34555555555543 45667888999998886553 3333322 23578999999999999999999999999998888
Q ss_pred EEE
Q psy15667 283 LQV 285 (286)
Q Consensus 283 L~V 285 (286)
|.|
T Consensus 108 l~v 110 (215)
T 3mtr_A 108 LVQ 110 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 406
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=5.1e-11 Score=83.02 Aligned_cols=75 Identities=25% Similarity=0.340 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+ +.|.+.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|. +|....++.|
T Consensus 19 ~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l 91 (103)
T 2dku_A 19 QVEEKGTAVFTCKT--EHPAATVTWRKGLLELRASGKHQPSQE-GLTLRLTISALEKADSDTYTCD----IGQAQSRAQL 91 (103)
T ss_dssp EEETTSEEEEEEEC--SSCCSCCEEEESSCBCCSSSSEEEEEE-TTEEEEEEESCCTTTCSEEEEE----CSSCBCCEEE
T ss_pred EEeCCCcEEEEEEe--CCCCCeEEEEeCCEECCCCCeEEEEeC-CCEEEEEECCCCcccCEEEEEE----eCCceEEEEE
Confidence 35678888888883 677889999999999877666665432 2345899999999999999998 6777777888
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 92 ~V 93 (103)
T 2dku_A 92 LV 93 (103)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 407
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.19 E-value=1.2e-10 Score=81.98 Aligned_cols=77 Identities=26% Similarity=0.342 Sum_probs=57.3
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EE---c-C--------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FE---L-P--------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~---l-~--------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.+...+.++++.+|++++|.|.+.+.|.+.+.|+|+. .. | . ...|+.+. . ......|.|.+
T Consensus 3 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~----~-~~~~~~L~I~~ 77 (108)
T 1jhl_L 3 ELTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGS----G-SGTDFTLTISS 77 (108)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE----E-SSSEEEEEECS
T ss_pred ceeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEE----e-cCCEEEEEECC
Confidence 4556677789999999999999999999999999863 11 1 0 12344331 1 11224699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|.|.+.|.
T Consensus 78 v~~~DsG~Y~C~~~n~ 93 (108)
T 1jhl_L 78 LEPEDFAMYICQQHNE 93 (108)
T ss_dssp CCTTCCSEEEEEECSS
T ss_pred CCHHHCEEEEEEEccC
Confidence 9999999999999885
No 408
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.18 E-value=4.4e-11 Score=83.36 Aligned_cols=74 Identities=19% Similarity=0.340 Sum_probs=53.1
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +.|.+ +.|+|++..+....++.+... .....|.|.++..+|+|.|+|. +|....++.|.
T Consensus 20 v~~G~~v~l~C~~~-~~p~~-v~W~k~~~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~----~g~~~~~~~l~ 92 (103)
T 2e7b_A 20 VLEGGAATLRCVLS-SVAAP-VKWCYGNNVLRPGDKYSLRQE-GAMLELVVRNLRPQDSGRYSCS----FGDQTTSATLT 92 (103)
T ss_dssp EESSSCEEEEEECS-SCCCS-CEEEESSSBCCCSSSEEEEEC-SSEEEEEECSCCTTTCCCEEEE----CSSCBCCBCEE
T ss_pred EECCCcEEEEEEEe-CCCCC-eEEEECCEECCCCCcEEEEEc-CCEEEEEEccCCcccCEEEEEE----ECCcEEEEEEE
Confidence 44566666666653 45556 999999998876666665532 2345799999999999999998 45556666666
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 93 V 93 (103)
T 2e7b_A 93 V 93 (103)
T ss_dssp E
T ss_pred E
Confidence 5
No 409
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.18 E-value=2.2e-09 Score=92.07 Aligned_cols=65 Identities=23% Similarity=0.264 Sum_probs=42.2
Q ss_pred cceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCce-E-EecCC-CEEEEeeEeee
Q psy15667 116 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKV-T-AIDGE-GLSIKCPVAGY 181 (286)
Q Consensus 116 ~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~-~-~~~g~-~~~l~c~~~~~ 181 (286)
...|.|.++..+|+|.|+|.+.+..+.. .....|.|...|.+...+.. . +..|+ .++|.|.+.+.
T Consensus 253 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~-~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~Gf 320 (401)
T 3f8u_B 253 NGTFWLPRVQPFQEGTYLATIHLPYLQG-QVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHF 320 (401)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEE
T ss_pred cEEEEECcCCHhhCceEEEEEEecccce-eEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCC
Confidence 4689999999999999999999876643 34566777665554332211 1 12344 45566666553
No 410
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.18 E-value=1.2e-10 Score=91.40 Aligned_cols=79 Identities=23% Similarity=0.447 Sum_probs=62.7
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
|.+...... +.+|+++.|.|.+.+.| |.+.|+++|..+..+.++.+. ..+ ..|.|.++..+|+|.|+|.|
T Consensus 113 p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~----~~~---~~L~i~~v~~~d~G~Y~C~a 182 (208)
T 3r4d_A 113 PFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLS----QNN---SILRIDPIKREDAGEYQCEI 182 (208)
T ss_dssp CEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEE----TTT---TEEEESSCCGGGCEEEEEEE
T ss_pred CEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEc----CCC---CEEEEeccCHHhCeEEEEEE
Confidence 444444333 89999999999999977 799999999999877776432 122 24899999999999999999
Q ss_pred EcCCEEEEE
Q psy15667 83 ENRAGTCEI 91 (286)
Q Consensus 83 ~n~~g~~~~ 91 (286)
.|..|....
T Consensus 183 ~N~~g~~~s 191 (208)
T 3r4d_A 183 SNPVSVRRS 191 (208)
T ss_dssp ECTTCCEEC
T ss_pred ecCCCcccC
Confidence 999887653
No 411
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.18 E-value=2.4e-10 Score=77.96 Aligned_cols=77 Identities=12% Similarity=0.305 Sum_probs=56.6
Q ss_pred ccccCCCcEEEEEEeec-CCCCeeEEeeCC----EEcCCCCeeEeceEEecccc-eeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 12 QTLQPGPAVSLKCIASG-NPTPDIGWTLDG----FELPTNNRFVIGQFVSGHGD-VISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~----~~l~~~~~~~~~~~~~~~~~-~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.++.+|+.+.|.|.+.+ .|.|+|+|.|.+ .+|........+. ...++ ....|.|.++..+|+|.|+|.|.|.
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w--~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~ 101 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSW--EENRSVPVFVLHFKPIHLSDNGSYSCSTNFN 101 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEE--ECSSSSCEEEEEETTCCGGGCEEEEEEEEET
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecce--eccCCceeEEEEEeeEEEcCCccEEEEeeCC
Confidence 46889999999999976 689999999976 4554322211111 11222 3446899999999999999999999
Q ss_pred CEEEE
Q psy15667 86 AGTCE 90 (286)
Q Consensus 86 ~g~~~ 90 (286)
.|..+
T Consensus 102 ~g~ie 106 (122)
T 1xau_A 102 SQVIN 106 (122)
T ss_dssp TEEEE
T ss_pred CCcee
Confidence 88775
No 412
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.17 E-value=6.3e-11 Score=93.25 Aligned_cols=79 Identities=27% Similarity=0.528 Sum_probs=64.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEe-ecCCCCeeEEeeCCEEcCCCC-eeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGFELPTNN-RFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
||.+...+.+..+.+|+.++|.|.+ .|.|.|.+.|++++..+.... ++.. .++ .|.|.++..+|+|.|+
T Consensus 111 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~------~~~---~L~i~~~~~~d~G~Y~ 181 (212)
T 2v9r_A 111 RDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITI------RGG---KLMITYTRKSDAGKYV 181 (212)
T ss_dssp CSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEE------ETT---EEEESSCCGGGCEEEE
T ss_pred cccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEc------cCC---eEEEeeCCHhhCeeEE
Confidence 4555566677789999999999998 899999999999999987543 3321 122 4889999999999999
Q ss_pred EEEEcCCEEE
Q psy15667 80 CVAENRAGTC 89 (286)
Q Consensus 80 C~a~n~~g~~ 89 (286)
|.|.|..|..
T Consensus 182 C~a~N~~g~~ 191 (212)
T 2v9r_A 182 CVGTNMVGER 191 (212)
T ss_dssp EEEEETTEEE
T ss_pred EEEecccCce
Confidence 9999998875
No 413
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.17 E-value=7e-11 Score=80.57 Aligned_cols=37 Identities=16% Similarity=0.372 Sum_probs=28.8
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccce-eeEEEEEEC
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQA-RYSSKLQVK 286 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~-~~~~~L~V~ 286 (286)
...|.|..|.++|+|.|+|.|.|+.|.. +++..|.|+
T Consensus 78 ~fiL~f~~V~~sDsG~YrCsAn~~~g~ieSHs~ti~V~ 115 (122)
T 1xau_A 78 VFVLHFKPIHLSDNGSYSCSTNFNSQVINSHSVTIHVR 115 (122)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEEeeEEEcCCccEEEEeeCCCCceeeeEEEEEEE
Confidence 3478999999999999999999987743 444445553
No 414
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.17 E-value=1.4e-10 Score=105.31 Aligned_cols=81 Identities=26% Similarity=0.330 Sum_probs=72.1
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+. |.|.|.++|+|+++++..+.++.+... ....+|.|.++..+|+|.|+|.|.|..|+.+..+.|
T Consensus 493 ~v~~G~~~~~~~~v~-g~P~P~v~W~k~~~el~~s~~~~i~~~-~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l 570 (573)
T 3uto_A 493 EVGEGQSANFYCRVI-ASSPPVVTWHKDDRELKQSVKYMKRYN-GNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 570 (573)
T ss_dssp EECTTSCEEEEEEEE-CSSCCEEEEEETTEECCSSSSEEEEEE-TTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEE-ccCCCeEEEEECCEEcccCCcEEEEEc-CCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEE
Confidence 367899999999985 889999999999999988887776654 346789999999999999999999999999999999
Q ss_pred EEC
Q psy15667 284 QVK 286 (286)
Q Consensus 284 ~V~ 286 (286)
.|.
T Consensus 571 ~Vt 573 (573)
T 3uto_A 571 NVT 573 (573)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
No 415
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.16 E-value=6e-11 Score=92.66 Aligned_cols=83 Identities=17% Similarity=0.100 Sum_probs=49.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|... ....+.+|++++|.|.+.+.| +.+.|+|||..+....... . ....+.....|.|.+++.+|+|.|+|.
T Consensus 100 ~p~i~~~-~~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~--~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 174 (196)
T 2d3v_A 100 KPTLSAL-PSPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDS--Q-LTPSGQFQALFPVGPVTPSHRWMLRCY 174 (196)
T ss_dssp CCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEEC--E-ECTTSCEEEEEECCCCBTTBCEEEEEE
T ss_pred CCeEEcc-CCccccCCCcEEEEEEcCCCC-CEEEEEccCCccccccccc--c-cccCCCceeEEEeeecCcccCeeEEEE
Confidence 4555543 346789999999999999999 8999999998875322110 0 011122234699999999999999999
Q ss_pred EEcCCEEE
Q psy15667 82 AENRAGTC 89 (286)
Q Consensus 82 a~n~~g~~ 89 (286)
|.|..+..
T Consensus 175 a~n~~~~~ 182 (196)
T 2d3v_A 175 GSRRHILQ 182 (196)
T ss_dssp EEETTEEE
T ss_pred EEccCCCC
Confidence 99976543
No 416
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.16 E-value=7.5e-11 Score=82.66 Aligned_cols=75 Identities=17% Similarity=0.231 Sum_probs=56.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
.|.|...+.. ++.+|++|+|.|.+.+.+ ..+.|+|+|..+.. .++ ...+ ....|.|.+++.+|+|.|.|.
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~~~~~-~~~~w~k~g~~~~~-~~~------~~~~-~~~~l~I~~v~~~dsG~Y~C~ 74 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHLPRMA-AWVQLWLNGTLRFD-KEK------DKEQ-DAAEFSFAVTNLEDAGTYQCR 74 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEECCSSC-EEEEEEETTEEEEE-EEE------CTTC-SEEEEEEECCSGGGCEEEEEE
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEcCCCC-cEEEEEECCcccee-eec------cCCC-CEEEEEECCCCHHHCeEEEEE
Confidence 5778777655 899999999999998764 67889999976532 111 1111 123589999999999999999
Q ss_pred EEcCC
Q psy15667 82 AENRA 86 (286)
Q Consensus 82 a~n~~ 86 (286)
+.|..
T Consensus 75 ~~n~~ 79 (105)
T 2vsd_A 75 YQVSE 79 (105)
T ss_dssp EEEET
T ss_pred EEcCC
Confidence 98853
No 417
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.16 E-value=7.8e-11 Score=93.02 Aligned_cols=89 Identities=15% Similarity=0.254 Sum_probs=64.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CC-CeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PT-PDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~-p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+.+..+.+|+.++|.|.+.|. |+ +.+.|++||..|..+....... ...+. ....|.|.++..+|+|.
T Consensus 114 ~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~--~~~~~~~~~s~L~i~~~~~~d~G~ 191 (213)
T 3mj8_L 114 APSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPS--KSDSKYMATSYLTMTADAWKSRNT 191 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCE--EETTEEEEEEEEEEESHHHHSCSC
T ss_pred CCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcC--ccCCcEEEEEEEEEeHHHcCCCCE
Confidence 6778877777777799999999999985 43 4999999999986532111000 01111 12348999999999999
Q ss_pred EEEEEEcCCEEEEEe
Q psy15667 78 YACVAENRAGTCEIT 92 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~ 92 (286)
|+|.|.|..+....+
T Consensus 192 Y~C~a~n~~~~~~~~ 206 (213)
T 3mj8_L 192 FICKVTHGGNTVEKS 206 (213)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred EEEEEEECCccEEee
Confidence 999999998776543
No 418
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.16 E-value=8.9e-11 Score=90.81 Aligned_cols=121 Identities=14% Similarity=0.249 Sum_probs=85.7
Q ss_pred ccccCCCcEEEEEEee--cCCCCeeEEee--CCEEc----------CCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 12 QTLQPGPAVSLKCIAS--GNPTPDIGWTL--DGFEL----------PTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 12 ~~~~~G~~~~l~C~~~--g~p~p~v~W~~--~~~~l----------~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+...+|++|+|.|... +.|.+.|.|++ ++..| +.+.|+.+. .++ +|.|.+++.+|+|.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~----~ng----sL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF----KNG----TLKIKHLKTDDQDI 80 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC----TTS----CEEECSCCGGGCEE
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC----CCC----CEEECCCChhhCEE
Confidence 4668999999999543 35678999999 88776 234555431 233 48999999999999
Q ss_pred EEEEEEcCCEEE------EEe----------------------cCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCCC
Q psy15667 78 YACVAENRAGTC------EIT----------------------PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDR 129 (286)
Q Consensus 78 Y~C~a~n~~g~~------~~~----------------------~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d~ 129 (286)
|+|.|.|..|.. .+. ....+++.+.|++||+.+. .....|.+.. ..+|+
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~--~~~~~i~~~~-~~~d~ 157 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLK--LSQRVITHKW-TTSLS 157 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEE--EESSCEEEEC-CSCEE
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECC--CCCcEEEEec-ccCCC
Confidence 999999876532 111 0112356899999999882 1223344433 58999
Q ss_pred eeEEEEEEcCCcce
Q psy15667 130 GIYQCIARRSDGDV 143 (286)
Q Consensus 130 G~Y~C~a~~~~g~~ 143 (286)
|.|+|.|.|..+..
T Consensus 158 G~Y~C~a~N~~~~~ 171 (182)
T 1hnf_A 158 AKFKCTAGNKVSKE 171 (182)
T ss_dssp EEEEEEEECSSCEE
T ss_pred cEEEEEEEeCCCCc
Confidence 99999999998865
No 419
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.15 E-value=1.1e-10 Score=86.73 Aligned_cols=81 Identities=22% Similarity=0.302 Sum_probs=60.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEe---------eCCEEcCCCCeeEeceEEecccceeEEEEEccccc
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWT---------LDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTV 72 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~ 72 (286)
|+.|...+.++++.+|++++|.|.+.+.|.+.+.|+ +++..+ .+.|+..... .....+|.|.+++.
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~-~~~r~~~~~~----~~~~~~L~I~~v~~ 112 (145)
T 1z9m_A 38 QDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRAL-RDNRIQLVTS----TPHELSISISNVAL 112 (145)
T ss_dssp CCTTCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECS-CCTTEEEEEE----CSSEEEEEECSCCG
T ss_pred ccceecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceec-ccCCEEEecC----CCCeEEEEECCCCh
Confidence 344556777889999999999999999999999999 444333 3345543211 11124699999999
Q ss_pred CCCeEEEEEEEcCCEE
Q psy15667 73 EDGGEYACVAENRAGT 88 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g~ 88 (286)
+|+|.|+|.+.|. |.
T Consensus 113 ~DsG~Y~C~~~n~-~~ 127 (145)
T 1z9m_A 113 ADEGEYTCSIFTM-PV 127 (145)
T ss_dssp GGCEEEEEEECSS-SC
T ss_pred hhCEEEEEEEEcC-CC
Confidence 9999999999997 53
No 420
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.15 E-value=1.3e-10 Score=95.10 Aligned_cols=89 Identities=18% Similarity=0.324 Sum_probs=62.7
Q ss_pred EEEEcccccCCCeEEEEEEEcCCEE------EEEe----------------------c---CCCCCeeEEEeeC-CccCc
Q psy15667 64 HVNISHVTVEDGGEYACVAENRAGT------CEIT----------------------P---YDSGPYLIAWFKD-GRQIP 111 (286)
Q Consensus 64 ~l~I~~~~~~D~G~Y~C~a~n~~g~------~~~~----------------------~---~~~~~~~~~W~~~-g~~l~ 111 (286)
.|.|.+++.+|+|.|+|.|.|..+. ..+. . ...+++.+.|+++ +..+.
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~ 164 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTE 164 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSS
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCc
Confidence 4899999999999999999875431 1110 0 1124568999994 32110
Q ss_pred -----------------------C--------CCCcceEEEccCCCCCCeeEEEEEEcCCcceeeeeeEEEEc
Q psy15667 112 -----------------------G--------RTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 153 (286)
Q Consensus 112 -----------------------~--------~~~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~ 153 (286)
. ......|.|.++..+|+|.|+|.|.|..|.. ...+.|.|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~ 236 (268)
T 3mj6_A 165 EETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLES-RKTIVLHVV 236 (268)
T ss_dssp CEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEE
T ss_pred ceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceE-EEEEEEEEE
Confidence 0 0124679999999999999999999988764 456777773
No 421
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.14 E-value=7.3e-11 Score=86.80 Aligned_cols=28 Identities=32% Similarity=0.604 Sum_probs=26.0
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
...|.|.++..+|+|.|+|.|.|..|..
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 89 ASTISIDTLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECCTTSS
T ss_pred ceEEEECCCCcccCEEEEEEEEecCCcc
Confidence 5689999999999999999999999975
No 422
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.14 E-value=1.5e-10 Score=81.38 Aligned_cols=74 Identities=26% Similarity=0.425 Sum_probs=54.3
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKL 283 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L 283 (286)
.+.+|+.+.|.|.+. +. +.+.|+|++..+....++.+... .....|.|.++..+|+|.|+|.|.|. ..++.|
T Consensus 19 ~v~~G~~v~l~C~~~-~~--p~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l 90 (108)
T 2dm7_A 19 EASEGATATLQCELS-KV--APVEWKKGPETLRDGGRYSLKQD-GTRCELQIHDLSVADAGEYSCMCGQE----RTSATL 90 (108)
T ss_dssp EEETTSCEEEEEEBS-SS--CCCEEESSSSBCCSSSSCEEEEE-TTEEEEEESSCCTTTCSEEEEEETTE----EEEEEC
T ss_pred EEeCCCcEEEEEEeC-CC--CeeEEEECCEECCCCCCEEEEec-CCEEEEEECCCCcccCEEEEEEEcCC----EEEEEE
Confidence 356777778888764 22 67899999998876666665543 23456999999999999999999653 455555
Q ss_pred EE
Q psy15667 284 QV 285 (286)
Q Consensus 284 ~V 285 (286)
.|
T Consensus 91 ~V 92 (108)
T 2dm7_A 91 TV 92 (108)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 423
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.14 E-value=5.4e-11 Score=84.97 Aligned_cols=78 Identities=28% Similarity=0.420 Sum_probs=45.2
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC---CceeeecCCCeeeEE-----EcccCCCCCeEEEEEEEecccc
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF---PVNVSDLDSFSSLLS-----INSVSAAHSGEYTCVASNTAAQ 276 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~---~~~~~~~~~~~~~L~-----i~~v~~~d~G~Y~C~a~N~~g~ 276 (286)
+.+|+.+.|.|.+. |.|.|.+.|+|++..+.... +....... ++.+. |.++..+|+|.|+|.|.|..|.
T Consensus 21 v~~G~~v~L~C~~~-g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~ 97 (117)
T 2v9t_A 21 VSKGEPATLNCKAE-GRPTPTIEWYKGGERVETDKDDPRSHRMLLP--SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGE 97 (117)
T ss_dssp ECTTCCEEECCEEE-EESCCEEEEEETTEECCCTTTCSSCSEEECT--TSCEEESSCCCBTTBCSSCEEEEEEEEETTEE
T ss_pred EcCCCcEEEEEECC-ccCCCeEEEEECCEeccccCCCCcceeEEec--CCcEEEEEEEeCCCCcCcCEEEEEEEEeCccc
Confidence 33455555555442 45566777888887765432 11111111 12222 3366899999999999999997
Q ss_pred eee-EEEEEE
Q psy15667 277 ARY-SSKLQV 285 (286)
Q Consensus 277 ~~~-~~~L~V 285 (286)
... .+.|.|
T Consensus 98 ~~s~~~~l~~ 107 (117)
T 2v9t_A 98 AVSHDASLEV 107 (117)
T ss_dssp EECCCEEEEE
T ss_pred eEeeeEEEEh
Confidence 654 334443
No 424
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.14 E-value=2.2e-10 Score=88.65 Aligned_cols=82 Identities=29% Similarity=0.560 Sum_probs=60.7
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC--CEEcCC-----CCeeEeceEEecccceeEEEEEcccccCCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD--GFELPT-----NNRFVIGQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--~~~l~~-----~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
|.+.. .....+.+|+.++|.|.+.|.|.|.+.|+++ +..+.. +.++.+.. ......|.|.++..+|+
T Consensus 96 p~~~~-~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~ 169 (192)
T 2va4_A 96 PHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG-----QHGSSSLHIKDVKLSDS 169 (192)
T ss_dssp EEEEE-ECCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEE-----ETTEEEEEEESCCGGGC
T ss_pred Ccccc-cCcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEee-----ccCceEEEEecCCcccC
Confidence 44433 3445677899999999999999999999998 666643 23333211 11124699999999999
Q ss_pred eEEEEEEEcCCEEEE
Q psy15667 76 GEYACVAENRAGTCE 90 (286)
Q Consensus 76 G~Y~C~a~n~~g~~~ 90 (286)
|.|+|.|.|..|...
T Consensus 170 G~Y~C~a~n~~g~~~ 184 (192)
T 2va4_A 170 GRYDCEAASRIGGHQ 184 (192)
T ss_dssp EEEEEEEECSSCEEE
T ss_pred EEEEEEEEecCCceE
Confidence 999999999998754
No 425
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.13 E-value=3.1e-10 Score=80.31 Aligned_cols=78 Identities=22% Similarity=0.394 Sum_probs=57.4
Q ss_pred eeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC--CE----EcCCCCeeEeceEEecccceeEEEEEcccccCCC
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD--GF----ELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~--~~----~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
.+...+..+.+.+|++|+|.|.+.+. |.+.+.|+++ +. .+..+.|+.... . .......|.|.+++.+|+
T Consensus 2 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~--~-~~~~~~~L~I~~v~~~Ds 78 (111)
T 2ywz_A 2 WVDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETV--D-KGSKSFSLRISDLRVEDS 78 (111)
T ss_dssp EEEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEE--E-TTTTEEEEEECSCCGGGC
T ss_pred eeEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEE--e-CCCCEEEEEECCCChhcC
Confidence 45667778899999999999999876 5789999985 22 233345554321 1 112234699999999999
Q ss_pred eEEEEEEEc
Q psy15667 76 GEYACVAEN 84 (286)
Q Consensus 76 G~Y~C~a~n 84 (286)
|.|.|.+.|
T Consensus 79 G~Y~C~~~~ 87 (111)
T 2ywz_A 79 GTYKCQADY 87 (111)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 999999987
No 426
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.13 E-value=1.2e-10 Score=91.73 Aligned_cols=80 Identities=16% Similarity=0.258 Sum_probs=61.1
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
+........+..|+.+.|.|.+.|.|+|.|+|++++..+.....+... ........|.|.++..+|+|.|+|.|.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~----~~~~~~s~L~i~~~~~~d~g~YtC~a~N 196 (218)
T 4frw_A 121 SLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHS----RSAAVTSEFHLVPSRSMNGQPLTCVVSH 196 (218)
T ss_dssp EEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECS----SSEEEEEEEEECCCGGGTTCEEEEEEEC
T ss_pred eeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecC----CcEEEEEEEEEeeCCHHhCeEEEEEEEe
Confidence 344455567889999999999999999999999998877544333221 1112234699999999999999999999
Q ss_pred CCEE
Q psy15667 85 RAGT 88 (286)
Q Consensus 85 ~~g~ 88 (286)
..|.
T Consensus 197 ~~g~ 200 (218)
T 4frw_A 197 PGLL 200 (218)
T ss_dssp TTCS
T ss_pred CCCC
Confidence 8763
No 427
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.11 E-value=3.3e-10 Score=87.95 Aligned_cols=79 Identities=27% Similarity=0.450 Sum_probs=59.5
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +.|.+.+.|+|++..+....+..+... .....|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 19 v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 96 (197)
T 3lcy_A 19 TKLGEAAQLSCQIV-GRPLPDIKWYRFGKELIQSRKYKMSSD-GRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLL 96 (197)
T ss_dssp EETTSEEEEEEEEE-EESCCEEEEEETTEEECCCSSEEEEES-SSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EeCCCcEEEEEEEe-cCCCCEEEEEECCEECCCCccEEEEeC-CCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEE
Confidence 34556666666553 356678889999988876655554432 2345899999999999999999999999988888887
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 97 v 97 (197)
T 3lcy_A 97 L 97 (197)
T ss_dssp E
T ss_pred E
Confidence 6
No 428
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.11 E-value=1.1e-10 Score=91.83 Aligned_cols=86 Identities=27% Similarity=0.465 Sum_probs=60.7
Q ss_pred CCeeEeccccccccCCCcEEEEEE-eecCCCCeeEEeeCCE-EcCCCCeeEe----ceEEecccceeEEEEEcccccCCC
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCI-ASGNPTPDIGWTLDGF-ELPTNNRFVI----GQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~-~~g~p~p~v~W~~~~~-~l~~~~~~~~----~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
||.+...+....+.+|++++|.|. +.+.|.|.+.|++++. .+..+.+... ......... ..|.|.++..+|+
T Consensus 104 ~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~ 181 (212)
T 1f97_A 104 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKS--GDLIFDPVTAFDS 181 (212)
T ss_dssp CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTT--CCEEESSCCGGGC
T ss_pred CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCC--ceEEEEecChhhC
Confidence 455554555667899999999999 7899999999999999 8765332100 000000111 2488999999999
Q ss_pred eEEEEEEEcCCEEE
Q psy15667 76 GEYACVAENRAGTC 89 (286)
Q Consensus 76 G~Y~C~a~n~~g~~ 89 (286)
|.|+|.|.|..|..
T Consensus 182 G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 182 GEYYCQAQNGYGTA 195 (212)
T ss_dssp EEEEEEEECSSSCC
T ss_pred cEEEEEEccccCCc
Confidence 99999999987754
No 429
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.11 E-value=5.3e-10 Score=89.82 Aligned_cols=83 Identities=25% Similarity=0.447 Sum_probs=61.8
Q ss_pred ccccccccCCCcEEEEEEeecCCCCeeEEee----CCEEcCCCCeeEec---eEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGNPTPDIGWTL----DGFELPTNNRFVIG---QFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~----~~~~l~~~~~~~~~---~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
.+....+.+|+.+.|.|.+.|+|.|.+.|++ ++..+..+...... ............|.|.++..+|+|.|+|
T Consensus 120 ~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 199 (241)
T 3grw_A 120 LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLC 199 (241)
T ss_dssp TTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEE
T ss_pred CCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEE
Confidence 3556678999999999999999999999999 88877654332110 0001111223469999999999999999
Q ss_pred EEEcCCEEEE
Q psy15667 81 VAENRAGTCE 90 (286)
Q Consensus 81 ~a~n~~g~~~ 90 (286)
.|.|..|...
T Consensus 200 ~a~N~~g~~~ 209 (241)
T 3grw_A 200 RATNFIGVAE 209 (241)
T ss_dssp EEECSSCEEE
T ss_pred EEecCcceEE
Confidence 9999988764
No 430
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.10 E-value=2.8e-10 Score=97.05 Aligned_cols=79 Identities=16% Similarity=0.249 Sum_probs=60.0
Q ss_pred cccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEe--cccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 13 TLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVS--GHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 13 ~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~--~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
.+.+|+.++|.|.+.|.|.|.|.|+++|..+............. ........|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 257 ~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~ 336 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 336 (347)
T ss_dssp CCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCcee
Confidence 45689999999999999999999999999998554432211000 0001134599999999999999999999999765
Q ss_pred E
Q psy15667 91 I 91 (286)
Q Consensus 91 ~ 91 (286)
.
T Consensus 337 ~ 337 (347)
T 2ifg_A 337 A 337 (347)
T ss_dssp E
T ss_pred e
Confidence 4
No 431
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.10 E-value=8e-11 Score=104.76 Aligned_cols=77 Identities=27% Similarity=0.520 Sum_probs=60.4
Q ss_pred eccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCC---CCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPT---NNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~---~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
..+.++++.+|++++|.|.+.|.|.|.+.|++++..+.. ..++.+ ...+ .|.|.+++.+|+|.|+|.|.
T Consensus 390 ~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~----~~~~----~L~i~~v~~~d~G~Y~C~a~ 461 (477)
T 2id5_A 390 RKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTV----FPDG----TLEVRYAQVQDNGTYLCIAA 461 (477)
T ss_dssp CSCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEE----CTTS----CEEESSCCSTTCEEEEEEEE
T ss_pred cccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEe----CCCC----EEEEeeCChHHCEEEEEEEE
Confidence 345667899999999999999999999999999987753 233322 1122 38899999999999999999
Q ss_pred cCCEEEEE
Q psy15667 84 NRAGTCEI 91 (286)
Q Consensus 84 n~~g~~~~ 91 (286)
|..|....
T Consensus 462 N~~g~~~~ 469 (477)
T 2id5_A 462 NAGGNDSM 469 (477)
T ss_dssp ETTEEEEE
T ss_pred eCCCcEEE
Confidence 99997653
No 432
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.09 E-value=1.9e-10 Score=80.96 Aligned_cols=71 Identities=23% Similarity=0.308 Sum_probs=51.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC-----eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCe
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP-----DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGG 76 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-----~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G 76 (286)
+|.+...+. ..+.+|++|+|+|.+.+.|.. ++.|+|||..+.. . ... ..|.|.+++.+|+|
T Consensus 8 kP~l~~~p~-~~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~---~-------~~~---~~l~i~~v~~~dsG 73 (108)
T 4hwn_A 8 APILRAVPS-AEPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS---R-------GLS---SEFQIPTASEDHSG 73 (108)
T ss_dssp CCEEEEESC-SSCBTTCCEEEEEEC---------CCEEEEEETTEEEEE---E-------ESC---CEEEESSCCGGGCE
T ss_pred CCEEEecCC-CcCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC---C-------Ccc---cEEEeCccCcccCe
Confidence 577776664 468899999999999876654 4999999987741 0 011 24889999999999
Q ss_pred EEEEEEEcCC
Q psy15667 77 EYACVAENRA 86 (286)
Q Consensus 77 ~Y~C~a~n~~ 86 (286)
.|+|.+.+..
T Consensus 74 ~Y~C~~~~~~ 83 (108)
T 4hwn_A 74 SYWCEAATED 83 (108)
T ss_dssp EEEEEEECTT
T ss_pred EEEEEEEeCC
Confidence 9999999864
No 433
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.09 E-value=1.7e-10 Score=89.98 Aligned_cols=80 Identities=18% Similarity=0.171 Sum_probs=56.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+. ..+.+|++++|.|.+.+. .+.+.|+|+|..+.......... .......|.|.+++.+|+|.|+|.
T Consensus 100 ~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~----~~~~~~~L~i~~v~~~d~G~Y~C~ 173 (196)
T 3p2t_A 100 KPTLSALPS-PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHG----AQQHQAEFPMSPVTSVHGGTYRCF 173 (196)
T ss_dssp CCEEEEESC-SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEE----EEEEEEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEeCCc-ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeeccccc----ccCcceEEEeCCCcccCCCeEEEE
Confidence 455554443 378899999999999885 46899999998775433211100 011123589999999999999999
Q ss_pred EEcCCE
Q psy15667 82 AENRAG 87 (286)
Q Consensus 82 a~n~~g 87 (286)
|.|..+
T Consensus 174 a~n~~~ 179 (196)
T 3p2t_A 174 SSHGFS 179 (196)
T ss_dssp EECGGG
T ss_pred EEcCCC
Confidence 999764
No 434
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.09 E-value=3.2e-10 Score=88.57 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=52.6
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCe-eEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNR-FVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
|.+... ....+.+|++++|.|.+.+. .+.+.|+|+|..+..... +.. ...+.....|.|.+++.+|+|.|+|.
T Consensus 102 p~i~~~-~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~----~~~~~~~~~L~i~~v~~~D~G~Y~C~ 175 (198)
T 1ugn_A 102 PTLSAQ-PSPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQP----HARGSSRAIFSVGPVSPSRRWWYRCY 175 (198)
T ss_dssp CEEEEE-SCSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC----------CCEEEEEECCCCTTSCEEEEEE
T ss_pred CccccC-CccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccc----cCCCcceeEEEecccCcccCeEEEEE
Confidence 444433 34678999999999999998 789999999988754322 111 01121224699999999999999999
Q ss_pred EEcCCE
Q psy15667 82 AENRAG 87 (286)
Q Consensus 82 a~n~~g 87 (286)
|.|..+
T Consensus 176 a~n~~~ 181 (198)
T 1ugn_A 176 AYDSNS 181 (198)
T ss_dssp EECTTS
T ss_pred EEeCCC
Confidence 999753
No 435
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.09 E-value=4.7e-10 Score=79.05 Aligned_cols=78 Identities=23% Similarity=0.242 Sum_probs=57.6
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--E---Ec-C--------CCCeeEeceEEecccceeEEEEEc
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--F---EL-P--------TNNRFVIGQFVSGHGDVISHVNIS 68 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~---~l-~--------~~~~~~~~~~~~~~~~~~~~l~I~ 68 (286)
+.+...+..+++.+|++++|.|.+.+.|.+.+.|+++. . .| . ...|+.... .. ....|.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~----~~-~~~~L~I~ 78 (109)
T 2q20_A 4 IQMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG----SG-TDFTFTIS 78 (109)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE----ET-TEEEEEES
T ss_pred ccEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec----cC-CEEEEEEC
Confidence 45666777889999999999999998888899999863 1 11 0 134544321 11 12369999
Q ss_pred ccccCCCeEEEEEEEcC
Q psy15667 69 HVTVEDGGEYACVAENR 85 (286)
Q Consensus 69 ~~~~~D~G~Y~C~a~n~ 85 (286)
+++.+|+|.|.|.+.+.
T Consensus 79 ~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 79 SLQPEDIATYYCQQYDN 95 (109)
T ss_dssp SCCGGGCEEEEEEECSS
T ss_pred CCChhhCEEEEEEEeeC
Confidence 99999999999999874
No 436
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.09 E-value=2.2e-10 Score=87.73 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=55.1
Q ss_pred EeccccccccCCCcEEEEEEeecCCCC-eeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEc
Q psy15667 6 TYSFIEQTLQPGPAVSLKCIASGNPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAEN 84 (286)
Q Consensus 6 ~~~~~~~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n 84 (286)
........+.+|+.++|.|.+.+.|++ .+.|+|||..+... . .. ..|.|.+++.+|+|.|+|.|.|
T Consensus 92 ~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~---------~-~~---~~L~i~~v~~~d~G~Y~C~a~n 158 (175)
T 1fnl_A 92 LLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF---------H-HN---SDFHIPKATLKDSGSYFCRGLV 158 (175)
T ss_dssp EEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE---------E-EC---CCEEESSCCGGGCEEEEEEEEE
T ss_pred eeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC---------C-CC---CEEEEcccChhhCeEEEEEEEc
Confidence 334455678899999999999988665 99999999887311 0 11 2488999999999999999999
Q ss_pred CCEE
Q psy15667 85 RAGT 88 (286)
Q Consensus 85 ~~g~ 88 (286)
..+.
T Consensus 159 ~~~~ 162 (175)
T 1fnl_A 159 GSKN 162 (175)
T ss_dssp TTEE
T ss_pred CCCC
Confidence 7664
No 437
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.09 E-value=3.9e-10 Score=83.74 Aligned_cols=91 Identities=21% Similarity=0.371 Sum_probs=59.9
Q ss_pred CceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCc
Q psy15667 162 PKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPV 241 (286)
Q Consensus 162 ~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~ 241 (286)
..+.+..|++++|.|.+.+.|.+.+.|.+.... .+ .++++..+. ..++
T Consensus 46 ~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~------------------------------~i-~~~~~~~~~-~~r~ 93 (145)
T 1z9m_A 46 SDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQ------------------------------TL-YFGEKRALR-DNRI 93 (145)
T ss_dssp CCEEEETTSCEEEEEECSCCTTCCEEEECTTCC------------------------------EE-EETTEECSC-CTTE
T ss_pred ceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCc------------------------------EE-EECCceecc-cCCE
Confidence 346677777777777777776666666531100 00 113333332 2333
Q ss_pred eeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 242 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
.+.........|.|.++..+|+|.|+|.|.|. |.....+.|.|
T Consensus 94 ~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V 136 (145)
T 1z9m_A 94 QLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTV 136 (145)
T ss_dssp EEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEE
T ss_pred EEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEE
Confidence 33332333568999999999999999999999 98888888887
No 438
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.09 E-value=1.9e-10 Score=88.90 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=56.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+ +..+.+|++++|.|.+.+.| +.+.|+|+|..+....+... ....|.|.+++.+|+|.|+|.
T Consensus 94 ~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~~~~~~~~---------~~~~L~i~~v~~~D~G~Y~C~ 162 (184)
T 2gi7_A 94 KPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAPYKNPERW---------YRASFPIITVTAAHSGTYRCY 162 (184)
T ss_dssp CCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTTSCCCCEE---------EEESSSEEEETTCCSEEEEEE
T ss_pred CCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCcceecCCC---------ceEEEEEccCCccCCeEEEEE
Confidence 45666555 66888999999999987765 68999999988764322110 112478999999999999999
Q ss_pred EEcCC
Q psy15667 82 AENRA 86 (286)
Q Consensus 82 a~n~~ 86 (286)
|.|..
T Consensus 163 a~n~~ 167 (184)
T 2gi7_A 163 SFSSR 167 (184)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 99964
No 439
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.08 E-value=1.9e-10 Score=101.38 Aligned_cols=82 Identities=24% Similarity=0.490 Sum_probs=63.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCE-EcCCC---CeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGF-ELPTN---NRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~-~l~~~---~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+|.|...+.+..+.+|++++|.|.+ +.|.|.+.|++++. .+... .++.+ ...+ +|.|.+++.+|+|.
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~----~~~~----~L~I~~v~~~D~G~ 411 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAV----LSDG----TLNFTNVTVQDTGM 411 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEE----CTTC----CEEESSCCSTTCEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEE----ccCC----eEEEccCChhhCEE
Confidence 6788888888899999999999999 67999999999554 33222 23322 1122 38899999999999
Q ss_pred EEEEEEcCCEEEEEe
Q psy15667 78 YACVAENRAGTCEIT 92 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~ 92 (286)
|+|.|.|..|..+.+
T Consensus 412 Y~C~a~N~~G~~~~~ 426 (440)
T 3zyj_A 412 YTCMVSNSVGNTTAS 426 (440)
T ss_dssp EEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCcEEEE
Confidence 999999999976543
No 440
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.08 E-value=3.6e-10 Score=86.55 Aligned_cols=71 Identities=21% Similarity=0.283 Sum_probs=55.8
Q ss_pred eEeccccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEE
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAE 83 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~ 83 (286)
+........+.+|++++|.|.+. +.|.+.+.|++||..+.... .+ ..|.|.++..+|+|.|+|.|.
T Consensus 88 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~----------~~---~~L~i~~v~~~d~G~Y~C~a~ 154 (176)
T 1f2q_A 88 LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY----------EN---HNISITNATVEDSGTYYCTGK 154 (176)
T ss_dssp EEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC----------CS---SEEEESSCCGGGCEEEEEEEE
T ss_pred eeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec----------CC---CeEEECCCCcccCEEEEEEEE
Confidence 34445567888999999999995 67778999999999884221 11 148899999999999999999
Q ss_pred cCCEE
Q psy15667 84 NRAGT 88 (286)
Q Consensus 84 n~~g~ 88 (286)
|..+.
T Consensus 155 n~~~~ 159 (176)
T 1f2q_A 155 VWQLD 159 (176)
T ss_dssp ETTEE
T ss_pred eCCcc
Confidence 97544
No 441
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.08 E-value=1.4e-10 Score=92.49 Aligned_cols=80 Identities=28% Similarity=0.502 Sum_probs=55.8
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeEEEEE
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQ 284 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~ 284 (286)
+.+|+.+.|.|.+. +.|.+.+.|+|+|..+....+............|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 31 v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 109 (231)
T 3ojm_B 31 VPAANTVKFRCPAG-GNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 109 (231)
T ss_dssp EETTSCEEEECCEE-EESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EccCCCEEEEEecc-cCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEE
Confidence 34555555555443 34566788999988876543322111112245799999999999999999999999888888887
Q ss_pred E
Q psy15667 285 V 285 (286)
Q Consensus 285 V 285 (286)
|
T Consensus 110 V 110 (231)
T 3ojm_B 110 V 110 (231)
T ss_dssp E
T ss_pred E
Confidence 6
No 442
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.07 E-value=8.6e-10 Score=77.54 Aligned_cols=77 Identities=26% Similarity=0.279 Sum_probs=56.3
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--E---Ec-C--------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--F---EL-P--------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~---~l-~--------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.+...+.++++.+|++++|.|.+.+.|.+.+.|+|+. . .| . ...|+... .......|.|.+
T Consensus 3 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~-----~~~~~~~L~I~~ 77 (108)
T 1qfw_M 3 ELTQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGS-----GSATDFTLTISS 77 (108)
T ss_dssp CEEEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECC-----BCSSEEEEEESS
T ss_pred cEEEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEE-----cCCCEEEEEECC
Confidence 3555677889999999999999998888899999853 1 11 1 12344331 111234699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|.|.+.+.
T Consensus 78 v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 78 VQAEDFADYHCGQTYN 93 (108)
T ss_dssp CCTTCCSEEEEEECSS
T ss_pred CChhhCEEEEEEEccC
Confidence 9999999999999874
No 443
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.07 E-value=2.2e-10 Score=90.40 Aligned_cols=86 Identities=16% Similarity=0.266 Sum_probs=60.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+.+|+.++|.|.+.| .|.+ .+.|++||..+..+...........++. ....|.|.++..+|+|.
T Consensus 112 ~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 191 (213)
T 3d9a_L 112 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 191 (213)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCE
T ss_pred CceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCE
Confidence 677777666665668999999999987 6665 8999999999875511111000011111 12369999999999999
Q ss_pred EEEEEEcCCE
Q psy15667 78 YACVAENRAG 87 (286)
Q Consensus 78 Y~C~a~n~~g 87 (286)
|+|.|.|...
T Consensus 192 Y~C~a~n~~~ 201 (213)
T 3d9a_L 192 YTCEATHKTS 201 (213)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEEEccC
Confidence 9999999753
No 444
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.07 E-value=4.3e-10 Score=90.91 Aligned_cols=79 Identities=25% Similarity=0.338 Sum_probs=59.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEee--CCEEcC------------CCCeeEeceEEecccceeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL--DGFELP------------TNNRFVIGQFVSGHGDVISHVNI 67 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~--~~~~l~------------~~~~~~~~~~~~~~~~~~~~l~I 67 (286)
||.|...+..+.+.+|++++|.|.+.+.|.+.+.|+| ++..+. ...|+.+. .......|.|
T Consensus 135 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~L~I 209 (247)
T 2ghw_B 135 ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGS-----GSGTDFTLTI 209 (247)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE-----CSSSEEEEEE
T ss_pred ceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEe-----cCCCeEEEEE
Confidence 3456666667789999999999999999999999999 554331 12344321 1122346999
Q ss_pred cccccCCCeEEEEEEEcC
Q psy15667 68 SHVTVEDGGEYACVAENR 85 (286)
Q Consensus 68 ~~~~~~D~G~Y~C~a~n~ 85 (286)
.+++.+|+|.|+|.|.|.
T Consensus 210 ~~v~~~D~G~Y~C~a~~~ 227 (247)
T 2ghw_B 210 SRLEPEDFAVYYCQQRSN 227 (247)
T ss_dssp CSCCGGGCEEEEEEECSS
T ss_pred CcCCHHHCEEEEEEEccC
Confidence 999999999999999884
No 445
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.07 E-value=8e-11 Score=91.33 Aligned_cols=62 Identities=19% Similarity=0.306 Sum_probs=51.2
Q ss_pred cccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEE
Q psy15667 13 TLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTC 89 (286)
Q Consensus 13 ~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~ 89 (286)
.+.+|+++.|.|.+ |.|.+.|+|||..|..... .. ..|.|.++..+|+|.|+|.|.|..|..
T Consensus 118 ~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---------~~---~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 118 GSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---------TK---NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---------CS---SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---------Cc---ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 34599999999988 8899999999999864322 11 137899999999999999999998865
No 446
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.07 E-value=2.2e-10 Score=91.18 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=56.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+ +..+.+|++++|.|.+.+.|.+.+.|+|||..+... +.. . .. ...|.|.+++.+|+|.|+|.
T Consensus 106 ~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~~-----~-~~--~~~L~I~~v~~~D~G~Y~C~ 175 (218)
T 1uct_A 106 KPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQS-----G-EH--PANFSLGPVDLNVSGIYRCY 175 (218)
T ss_dssp CCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EEE-----C-SS--SEEEECCSCCGGGCEEEEEE
T ss_pred CCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-ccC-----C-Cc--cCEEEEccCCcccCEEEEEE
Confidence 45565444 668899999999998778888999999999877542 110 0 11 13589999999999999999
Q ss_pred EEcC
Q psy15667 82 AENR 85 (286)
Q Consensus 82 a~n~ 85 (286)
|.|.
T Consensus 176 a~n~ 179 (218)
T 1uct_A 176 GWYN 179 (218)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9985
No 447
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.07 E-value=5.3e-10 Score=78.63 Aligned_cols=78 Identities=18% Similarity=0.346 Sum_probs=56.7
Q ss_pred eeEeccccccccCCCcEEEEEEeecCC--CCeeEEeeCC--E----EcCCCCeeEeceEEecccceeEEEEEcccccCCC
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG--F----ELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~--~----~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+++. . .+..+.|+.+.. . .......|+|.+++.+|+
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~--~-~~~~~~~L~I~~~~~~Ds 78 (108)
T 2coq_A 2 RVDQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETV--D-EGSNSASLTIRDLRVEDS 78 (108)
T ss_dssp CEEEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEECCCBTTEEEEE--E-TTTTEEEEEECSCCGGGC
T ss_pred ceEeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEEEeCCceEEEE--c-CCCCEEEEEECCCCcccC
Confidence 355667788999999999999998763 5789999863 2 233345664321 1 112234699999999999
Q ss_pred eEEEEEEEc
Q psy15667 76 GEYACVAEN 84 (286)
Q Consensus 76 G~Y~C~a~n 84 (286)
|.|.|.+.+
T Consensus 79 G~Y~C~~~~ 87 (108)
T 2coq_A 79 GTYKCKAYR 87 (108)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999987
No 448
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.06 E-value=2.2e-10 Score=90.32 Aligned_cols=86 Identities=15% Similarity=0.261 Sum_probs=59.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+.+|+.++|.|.+.| .|.+ .|.|+|||..+..+............+. ....|.|.++..+|+|.
T Consensus 111 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 190 (210)
T 1lk3_L 111 APTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNL 190 (210)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCc
Confidence 577776666655668999999999997 4554 8999999999875411110000011111 12358999999999999
Q ss_pred EEEEEEcCCE
Q psy15667 78 YACVAENRAG 87 (286)
Q Consensus 78 Y~C~a~n~~g 87 (286)
|+|.|.|...
T Consensus 191 Y~C~a~n~~~ 200 (210)
T 1lk3_L 191 YTCEVVHKTS 200 (210)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEEecCC
Confidence 9999999653
No 449
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.06 E-value=1e-09 Score=86.57 Aligned_cols=88 Identities=13% Similarity=0.198 Sum_probs=62.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCC-CC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNP-TP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p-~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+.+|+.++|.|.+.|.| ++ .|.|++||..+..+..... .....++. ....|.|..+..+|+|.
T Consensus 115 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~d~g~ 193 (212)
T 1q0x_L 115 SPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQ-PSKQSNNKYMASSYLTLTARAWERHSS 193 (212)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC-CEECTTSCEEEEEEEEEEHHHHTTCCE
T ss_pred CCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCC-ceeCCCCCEEEEEEEEEcHHHccCCCc
Confidence 67777666666666899999999999854 43 8999999999875422110 01111111 22358899999999999
Q ss_pred EEEEEEcCCEEEE
Q psy15667 78 YACVAENRAGTCE 90 (286)
Q Consensus 78 Y~C~a~n~~g~~~ 90 (286)
|+|.|.|......
T Consensus 194 Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 194 YSCQVTHEGHSSN 206 (212)
T ss_dssp EEEEEEETTEEEE
T ss_pred EEEEEEeCCccee
Confidence 9999999876543
No 450
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.06 E-value=4.6e-10 Score=82.11 Aligned_cols=77 Identities=18% Similarity=0.320 Sum_probs=58.5
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC--CEE---c-CCCCeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD--GFE---L-PTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--~~~---l-~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
.+...+..+.+.+|++++|.|.+.+. +.+.|+|+ +.. + ....|+.+.. .+. ...|.|.+++.+|+|.
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~----~~~-~~~L~I~~~~~~DsG~ 91 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQ----NGS-VYTLTIQNIQYEDNGI 91 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEE----ETT-EEEEEECSCCGGGCEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEc----CCC-EEEEEECCCChHHCEE
Confidence 45667788899999999999999987 88999987 322 2 2356665421 222 3469999999999999
Q ss_pred EEEEEEcCCE
Q psy15667 78 YACVAENRAG 87 (286)
Q Consensus 78 Y~C~a~n~~g 87 (286)
|.|.+.|..|
T Consensus 92 Y~C~a~n~~g 101 (133)
T 3khq_A 92 YFCKQKCDSA 101 (133)
T ss_dssp EEEEESSCC-
T ss_pred EEEEEEeCCC
Confidence 9999998764
No 451
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.06 E-value=2.8e-10 Score=87.78 Aligned_cols=68 Identities=15% Similarity=0.282 Sum_probs=55.8
Q ss_pred cccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEE
Q psy15667 9 FIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGT 88 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~ 88 (286)
+.+..+.+|++++|.|.+.+.|.|.+.|++++..+.. .. ..|.|.+++.+|+|.|+|.|.|..+.
T Consensus 104 ~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~------------~~---~~L~i~~v~~~d~G~Y~C~a~n~~~~ 168 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ------------GG---KTLSVSQLELQDSGTWTCTVLQNQKK 168 (184)
T ss_dssp SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE------------ES---SEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc------------Cc---eEEEEecCCcCCCeEEEEEEEECCce
Confidence 4556789999999999999999999999998755410 11 14889999999999999999998887
Q ss_pred EEE
Q psy15667 89 CEI 91 (286)
Q Consensus 89 ~~~ 91 (286)
...
T Consensus 169 ~~~ 171 (184)
T 2ny1_B 169 VEF 171 (184)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 452
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.06 E-value=2.2e-10 Score=90.04 Aligned_cols=81 Identities=22% Similarity=0.372 Sum_probs=59.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEe-ecCCCCeeEEeeCCE--EcCCCCeeEeceEEecccceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTLDGF--ELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~~~~--~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y 78 (286)
||.+...+.+..+.+|++++|.|.+ .|.|.|.+.|++++. .+.....+. ..++ .|.|.+++.+|+|.|
T Consensus 121 ~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~~~------~~~~---~L~i~~~~~~d~G~Y 191 (214)
T 3jz7_A 121 KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAE------MTSP---VISVKNASSEYSGTY 191 (214)
T ss_dssp CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGGGG------TTSS---EEEECSCCGGGCEEE
T ss_pred CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccceec------cCCC---EEEEecCCHHHCEEE
Confidence 4455445555668899999999999 899999999999543 333221111 1111 489999999999999
Q ss_pred EEEEEcCCEEEEE
Q psy15667 79 ACVAENRAGTCEI 91 (286)
Q Consensus 79 ~C~a~n~~g~~~~ 91 (286)
+|.|.|..|....
T Consensus 192 ~C~a~N~~g~~~~ 204 (214)
T 3jz7_A 192 SCTVQNRVGSDQC 204 (214)
T ss_dssp EEEEECSSCEEEE
T ss_pred EEEEEcCCCcEEE
Confidence 9999999887643
No 453
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.04 E-value=1.7e-11 Score=81.05 Aligned_cols=55 Identities=22% Similarity=0.541 Sum_probs=42.4
Q ss_pred CCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCCCceeeecCCCeeeEEEccc-CCCCCeEEEEEEEe
Q psy15667 205 LPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSV-SAAHSGEYTCVASN 272 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v-~~~d~G~Y~C~a~N 272 (286)
+..|+.+.|.|.+. |.| .|+|+|+|..+... .+..|.|.++ ..+|+|.|+|.|.+
T Consensus 11 ~~~G~~v~L~C~~~-g~P--~i~W~kdg~~l~~~----------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 11 SISGTSVELTCPLD-SDE--NLKWEKNGQELPQK----------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp EEETTEEEEECSSC-CCS--SCEEEETTEECTTC----------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred EEcCCeEEEEEECC-CCC--cEEEEECCEECcCC----------CCCEEEECccCccCcCEEEEEEEcc
Confidence 34577777788764 455 39999999988643 1457899996 78999999999976
No 454
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.04 E-value=1e-09 Score=77.03 Aligned_cols=77 Identities=25% Similarity=0.393 Sum_probs=56.7
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EE---c-C--------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FE---L-P--------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~---l-~--------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.+...+..+++.+|++++|.|.+.+.|.+.+.|+|+. .. | . ...|+.... .+ ....|.|.+
T Consensus 3 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~----~~-~~~~L~I~~ 77 (107)
T 1i8k_A 3 ELTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG----TG-TDFVFTIEN 77 (107)
T ss_dssp CEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE----ET-TEEEEEESS
T ss_pred ceEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc----cC-CEEEEEECC
Confidence 4556677889999999999999998888899999853 21 1 1 123444321 11 223699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|.|.+.+.
T Consensus 78 v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 78 TLSEDVGDYYCLQSFN 93 (107)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCHHHCEEEEEEEeeC
Confidence 9999999999999874
No 455
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.04 E-value=4.1e-10 Score=89.11 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=60.5
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+..|+.++|.|.+.| .|.+ .+.|++||..|..+....... ...+. ....|.|.....+|+|.
T Consensus 121 ~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~--~~~~~~~~~s~l~i~~~~~~d~g~ 198 (218)
T 3s96_B 121 TPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPT--KEGNKFMASSFLHLTSDQWRSHNS 198 (218)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC----------------CEEEEEEEEEEHHHHHTCSC
T ss_pred CceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCccc--ccCCcEEEEEEEEEeHHHccCCCe
Confidence 577777666677778899999999998 5777 899999999986522111000 00111 12348899999999999
Q ss_pred EEEEEEcCCEEEEE
Q psy15667 78 YACVAENRAGTCEI 91 (286)
Q Consensus 78 Y~C~a~n~~g~~~~ 91 (286)
|+|.|.|..+..+.
T Consensus 199 Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 199 FTCQVTHEGDTVEK 212 (218)
T ss_dssp EEEEEEETTEEEEE
T ss_pred EEEEEEeCCCcccc
Confidence 99999999887654
No 456
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.04 E-value=2.1e-10 Score=102.08 Aligned_cols=78 Identities=27% Similarity=0.506 Sum_probs=62.1
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCC---CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPR---FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~---~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
.+.+|+.+.|.|.+. |.|.|.+.|+|+|..+... .++.+. ..++|.|.+++.+|+|.|+|.|.|..|....+
T Consensus 396 ~v~~G~~v~l~C~~~-g~P~p~i~W~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 470 (477)
T 2id5_A 396 FVDEGHTVQFVCRAD-GDPPPAILWLSPRKHLVSAKSNGRLTVF----PDGTLEVRYAQVQDNGTYLCIAANAGGNDSMP 470 (477)
T ss_dssp EEETTCCEEECCCEE-EESCCEEEEECTTSCBC-------CEEC----TTSCEEESSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred EEeCCCeEEEEEecc-ccCCCEEEEEECCccccccCCCceEEeC----CCCEEEEeeCChHHCEEEEEEEEeCCCcEEEE
Confidence 467899999999875 7889999999999876532 122211 13579999999999999999999999999999
Q ss_pred EEEEEC
Q psy15667 281 SKLQVK 286 (286)
Q Consensus 281 ~~L~V~ 286 (286)
+.|.|+
T Consensus 471 ~~l~V~ 476 (477)
T 2id5_A 471 AHLHVR 476 (477)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999884
No 457
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.04 E-value=9.6e-10 Score=78.79 Aligned_cols=78 Identities=23% Similarity=0.296 Sum_probs=57.0
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EE---c-C--------CCCeeEeceEEecccceeEEEEEc
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FE---L-P--------TNNRFVIGQFVSGHGDVISHVNIS 68 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~---l-~--------~~~~~~~~~~~~~~~~~~~~l~I~ 68 (286)
+.+...+..+++.+|++++|.|.+.+.|.+.+.|+++. .. | . ...|+.... .. ....|.|.
T Consensus 4 ~~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~----~~-~~~~L~I~ 78 (119)
T 2e27_L 4 IQMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG----SG-RDYSFSIS 78 (119)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE----ET-TEEEEEEC
T ss_pred ceeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc----cC-CEEEEEEC
Confidence 34556677788999999999999999888899999853 11 1 1 124444321 11 12369999
Q ss_pred ccccCCCeEEEEEEEcC
Q psy15667 69 HVTVEDGGEYACVAENR 85 (286)
Q Consensus 69 ~~~~~D~G~Y~C~a~n~ 85 (286)
+++.+|+|.|.|.+.|.
T Consensus 79 ~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 79 NLEPEDAATYYCLQYDN 95 (119)
T ss_dssp SCCGGGCEEEEEEECGG
T ss_pred CCChHHCEEEEEEEccC
Confidence 99999999999999874
No 458
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.03 E-value=6.5e-10 Score=87.68 Aligned_cols=82 Identities=18% Similarity=0.272 Sum_probs=59.8
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCCeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~Y 78 (286)
+|.+........+.+|+.++|.|.+.| .|.|.+.|++||..+..+............+. ....|.|.++..+|+|.|
T Consensus 114 ~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y 193 (213)
T 3nl4_L 114 APTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEY 193 (213)
T ss_dssp CCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEE
T ss_pred CCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeE
Confidence 677777677777888999999999998 89999999999998864320100000001111 123589999999999999
Q ss_pred EEEEE
Q psy15667 79 ACVAE 83 (286)
Q Consensus 79 ~C~a~ 83 (286)
+|.|.
T Consensus 194 ~C~a~ 198 (213)
T 3nl4_L 194 TCKVT 198 (213)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99998
No 459
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.03 E-value=4.8e-10 Score=88.57 Aligned_cols=90 Identities=18% Similarity=0.221 Sum_probs=62.4
Q ss_pred EEEEcccccCCCeEEEEEEEcCCEEEEEe---------------------------------cCCCCCeeEEEeeCCccC
Q psy15667 64 HVNISHVTVEDGGEYACVAENRAGTCEIT---------------------------------PYDSGPYLIAWFKDGRQI 110 (286)
Q Consensus 64 ~l~I~~~~~~D~G~Y~C~a~n~~g~~~~~---------------------------------~~~~~~~~~~W~~~g~~l 110 (286)
+|.|.+++.+|+|.|+|.|.|..+..... ....+++.+.|++++..+
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~ 163 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGE 163 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCE
T ss_pred EEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccc
Confidence 48999999999999999998865532110 001235678999987654
Q ss_pred cC-----CC------CcceEEEccCCCCCCeeEEEEEEcCCccee-eeeeEEEEc
Q psy15667 111 PG-----RT------SSTSLVINPVGREDRGIYQCIARRSDGDVA-QGSAELQLG 153 (286)
Q Consensus 111 ~~-----~~------~~~~l~i~~v~~~d~G~Y~C~a~~~~g~~~-~~~~~l~v~ 153 (286)
.. .. ..+.|.|.++..+|+|.|+|.|.|..+... ...+.|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 164 AKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred cCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 21 01 124699999999999999999999877542 234455553
No 460
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.02 E-value=1.8e-09 Score=78.00 Aligned_cols=80 Identities=24% Similarity=0.416 Sum_probs=58.3
Q ss_pred CeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeC--CE----EcCCCCeeEeceEEecccceeEEEEEcccccCC
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLD--GF----ELPTNNRFVIGQFVSGHGDVISHVNISHVTVED 74 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~--~~----~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D 74 (286)
+.+...+....+.+|++++|.|...+. +.+.+.|++. +. .+..+.|+.... .......+|+|.+++.+|
T Consensus 1 ~~V~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~R~~~~~---~~~~~~~sL~I~~v~~~D 77 (126)
T 3moq_A 1 AWVDQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETV---NKGSKSFSLRISDLRVED 77 (126)
T ss_dssp CEEEEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCCBTTEEEEE---ETTTTEEEEEECSCCGGG
T ss_pred CceEECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEEEeCCcEEEEE---eCCCCEEEEEECcCChHh
Confidence 356677788899999999999999875 5678999984 32 233445554321 112223469999999999
Q ss_pred CeEEEEEEEcC
Q psy15667 75 GGEYACVAENR 85 (286)
Q Consensus 75 ~G~Y~C~a~n~ 85 (286)
+|.|.|.+.+.
T Consensus 78 sG~Y~C~~~~~ 88 (126)
T 3moq_A 78 SGTYKCQAFYV 88 (126)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEEEEEc
Confidence 99999998774
No 461
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.02 E-value=7.2e-10 Score=79.55 Aligned_cols=77 Identities=25% Similarity=0.313 Sum_probs=56.8
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EE---c-C--------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FE---L-P--------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~---l-~--------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.+...+..+++.+|++++|.|.+.+.|.+.+.|+|+. .. | . ...|+.+.. .. ...+|.|.+
T Consensus 3 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~----~~-~~~~L~I~~ 77 (120)
T 1mqk_L 3 ELTQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG----SG-TQFSLKINS 77 (120)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE----ET-TEEEEEESS
T ss_pred ceEecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec----cC-CEEEEEECC
Confidence 3556677889999999999999999888899999853 21 1 1 134554321 11 123699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|.|.+.|.
T Consensus 78 v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 78 LLPEDFGSYYCQHHYG 93 (120)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCHHHCEEEEEEEEeC
Confidence 9999999999999874
No 462
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.02 E-value=5.6e-10 Score=84.76 Aligned_cols=70 Identities=14% Similarity=0.269 Sum_probs=55.3
Q ss_pred eccccccccCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcC
Q psy15667 7 YSFIEQTLQPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.......+.+|++++|.|.+. +.|.+.+.|++||..+.... .. ..|.|.+++.+|+|.|+|.|.|.
T Consensus 90 ~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~----------~~---~~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 90 LQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSH----------LD---PTFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp EECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEES----------SC---CEEEESSCCGGGCEEEEEEEEET
T ss_pred ecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccC----------CC---CeEEEEeccccCCEEEEEEEEeC
Confidence 344566788999999999995 56779999999998764211 11 14889999999999999999999
Q ss_pred CEEE
Q psy15667 86 AGTC 89 (286)
Q Consensus 86 ~g~~ 89 (286)
.|..
T Consensus 157 ~g~~ 160 (170)
T 3ry4_A 157 YTLF 160 (170)
T ss_dssp TEEE
T ss_pred cCcc
Confidence 8853
No 463
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.02 E-value=8.4e-10 Score=87.33 Aligned_cols=85 Identities=16% Similarity=0.253 Sum_probs=58.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CCCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NPTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+..........+|+.++|.|.+.| .|.+ .|.|++||..+..+...........++. ....|.|..+..+|+|.
T Consensus 114 ~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 193 (216)
T 2xzc_L 114 APSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKV 193 (216)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCE
T ss_pred CCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCc
Confidence 566666554444456999999999998 5655 8999999998865411110000011111 12358999999999999
Q ss_pred EEEEEEcCC
Q psy15667 78 YACVAENRA 86 (286)
Q Consensus 78 Y~C~a~n~~ 86 (286)
|+|.|.|..
T Consensus 194 Y~C~a~n~~ 202 (216)
T 2xzc_L 194 YACEVTHQG 202 (216)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999965
No 464
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.02 E-value=3.6e-10 Score=99.59 Aligned_cols=80 Identities=21% Similarity=0.451 Sum_probs=61.3
Q ss_pred CCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC-CCC-CCceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL-SPR-FPVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~-~~~-~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
..+.+|+.+.|.|.+ +.|+|.+.|++++..+ ... ....+... ..++|.|.+++.+|+|.|+|.|.|.+|....+
T Consensus 351 ~~v~~G~~v~L~C~~--~~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 426 (440)
T 3zyj_A 351 LNVTEGMAAELKCRA--STSLTSVSWITPNGTVMTHGAYKVRIAVL--SDGTLNFTNVTVQDTGMYTCMVSNSVGNTTAS 426 (440)
T ss_dssp EEECTTSCCEECCEE--SSTTSEEEEECTTSCEEESSSCCSSEEEC--TTCCEEESSCCSTTCEEEEEEEECSSCEEEEE
T ss_pred eeeccCceEEEEeec--CCCCCceEEEeCCCceeeccCCCceEEEc--cCCeEEEccCChhhCEEEEEEEEcCCCcEEEE
Confidence 347899999999998 4578999999955433 222 11122221 24579999999999999999999999999999
Q ss_pred EEEEEC
Q psy15667 281 SKLQVK 286 (286)
Q Consensus 281 ~~L~V~ 286 (286)
+.+.|+
T Consensus 427 ~~~~v~ 432 (440)
T 3zyj_A 427 ATLNVT 432 (440)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999884
No 465
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.01 E-value=7.4e-11 Score=93.16 Aligned_cols=85 Identities=12% Similarity=0.187 Sum_probs=60.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CC-CeeEEeeCCEEcCCCCeeEeceEEeccc-ceeEEEEEcccccCCCeEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PT-PDIGWTLDGFELPTNNRFVIGQFVSGHG-DVISHVNISHVTVEDGGEY 78 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~-p~v~W~~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~I~~~~~~D~G~Y 78 (286)
||.+........+.+|+.++|.|.+.|. |+ +.+.|++||..+..+..... ......+ .....|.|.++..+|+|.|
T Consensus 113 ~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d~G~Y 191 (212)
T 1nfd_E 113 SPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTK-PSKQGQNYMTSSYLSLTADQWKSHNRV 191 (212)
T ss_dssp CCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCC-CBCSSSCEEEEEBCCEEHHHHHTCSCE
T ss_pred CCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCC-ceecCCCceEEEEEEEchhhcCCCCeE
Confidence 5667665666666789999999999987 55 79999999999865422110 0000011 0123488999999999999
Q ss_pred EEEEEcCCE
Q psy15667 79 ACVAENRAG 87 (286)
Q Consensus 79 ~C~a~n~~g 87 (286)
+|.|.|..+
T Consensus 192 ~C~a~n~~~ 200 (212)
T 1nfd_E 192 SCQVTHEGE 200 (212)
T ss_dssp EEEEECTTT
T ss_pred EEEEEeCCc
Confidence 999999754
No 466
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.00 E-value=4.2e-10 Score=86.05 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=55.5
Q ss_pred EEEEcccccCCCeEEEEEEEcCCEEEE--E----------------------ecCCCCCeeEEEeeCCccCcCCCCcceE
Q psy15667 64 HVNISHVTVEDGGEYACVAENRAGTCE--I----------------------TPYDSGPYLIAWFKDGRQIPGRTSSTSL 119 (286)
Q Consensus 64 ~l~I~~~~~~D~G~Y~C~a~n~~g~~~--~----------------------~~~~~~~~~~~W~~~g~~l~~~~~~~~l 119 (286)
+|.|.+++.+|+|.|+|.+.|..|... + .....+++.+.|++||..+... ....|
T Consensus 61 sL~I~~v~~~DsG~Y~C~~~n~~~~~~~~L~V~~~~~~p~i~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~-~~~~l 139 (171)
T 1ccz_A 61 SLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSL-RQKTM 139 (171)
T ss_dssp CEEECSCCGGGCEEEEEECTTCCSCEEEEEEEECCCCCCEEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEE-SSSEE
T ss_pred eEEECCCChhhCceEEEEEeCCCCcEEEEEEEECcCCCCEEEEecCCcEEEEEeCCCCCcEEEEEECCEECcCC-cceEE
Confidence 489999999999999999987655221 1 1112245789999999987532 12334
Q ss_pred EEccCCCCCCeeEEEEEEcCCcce
Q psy15667 120 VINPVGREDRGIYQCIARRSDGDV 143 (286)
Q Consensus 120 ~i~~v~~~d~G~Y~C~a~~~~g~~ 143 (286)
.+. ...|+|.|+|.|.|..+..
T Consensus 140 ~~~--~~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 140 SYQ--WTNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp EEE--CSCCSSCEEEEEEETTEEE
T ss_pred EEe--ccCCCceEEEEEEcccCcc
Confidence 443 4789999999999998764
No 467
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.00 E-value=8.7e-10 Score=86.85 Aligned_cols=90 Identities=14% Similarity=0.191 Sum_probs=64.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC--CCCeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN--PTPDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~--p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+...+.+..+.+|+.++|.|.+.|. |.+.+.|++||..|..+..... ......+. ....|.|.++..+|+|.
T Consensus 111 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~-~~~~~~~~~~~~s~L~i~~~~~~d~g~ 189 (211)
T 3tv3_L 111 APSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTT-PSKQSNNKYAASSYLSLTPEQWKSHRS 189 (211)
T ss_dssp CCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECC-CEECTTSSEEEEEEEEECHHHHHHSSC
T ss_pred CCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCC-ceECCCCCEEEEEEEEEcHHHhCCCCe
Confidence 6778777777777789999999999985 4589999999998864211100 00011111 12458899999999999
Q ss_pred EEEEEEcCCEEEEEe
Q psy15667 78 YACVAENRAGTCEIT 92 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~ 92 (286)
|+|.|.|..+....+
T Consensus 190 Y~C~v~~~~~~~~~~ 204 (211)
T 3tv3_L 190 YSCQVTHEGSTVEKT 204 (211)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCEEee
Confidence 999999998776543
No 468
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.00 E-value=4.8e-10 Score=96.23 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=61.7
Q ss_pred CCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC----CceeeecCCCeeeEEEcccCCCCCeEEEEEEEeccccee
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQAR 278 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 278 (286)
..+.+|+.+.|.|.+. | |+|.+.|++++..+.... ++.+ ..++|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 256 v~v~~G~~~~l~C~~~-g-p~p~i~W~~~~~~~~~~~~~~~r~~~-----~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~ 328 (361)
T 2xot_A 256 WEAHLGDTLTIRCDTK-Q-QGMTKVWVSPSNEQVLSQGSNGSVSV-----RNGDLFFKKVQVEDGGVYTCYAMGETFNET 328 (361)
T ss_dssp CEEETTCCEEECCCCS-S-TTCEEEEECTTSCBCCSCCSSSSEEE-----ETTEEEESSCCTTSCEEEEEEEECSSCEEE
T ss_pred ceecCCCeEEEEeEee-C-CCCeEEEEeCCCeeEeecccCCceEe-----ecCeEEEeecCcccCEEEEEEEecCCCccE
Confidence 3477899999999985 5 888999999776543221 2332 145799999999999999999999999999
Q ss_pred eEEEEEE
Q psy15667 279 YSSKLQV 285 (286)
Q Consensus 279 ~~~~L~V 285 (286)
.++.|.|
T Consensus 329 ~~~~l~V 335 (361)
T 2xot_A 329 LSVELKV 335 (361)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999987
No 469
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.00 E-value=6.2e-10 Score=87.61 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=52.1
Q ss_pred cccccccCCCcEEEEEEeecC-CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCE
Q psy15667 9 FIEQTLQPGPAVSLKCIASGN-PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAG 87 (286)
Q Consensus 9 ~~~~~~~~G~~~~l~C~~~g~-p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g 87 (286)
.....+.+|++++|.|.+.++ |.+.+.|++||..+.... .. ..|.|.+++.+|+|.|+|.|.|..+
T Consensus 95 ~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~----------~~---~~L~i~~v~~~D~G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 95 APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFH----------HN---SDFYIPKATLKDSGSYFCRGLVGSK 161 (204)
T ss_dssp CSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEE----------EC---CCEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeeccc----------CC---ceEEECcCCcccCEEEEEEEEeCCC
Confidence 344778899999999999765 668999999998863210 11 1488999999999999999999544
No 470
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.00 E-value=3.6e-10 Score=99.93 Aligned_cols=81 Identities=27% Similarity=0.534 Sum_probs=63.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC-EEcCCC---CeeEeceEEecccceeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG-FELPTN---NRFVIGQFVSGHGDVISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~-~~l~~~---~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~ 77 (286)
+|.|...+.+..+.+|++++|.|.+. |.|.|.|++++ ..+... .++.+ ...+ +|.|.+++.+|+|.
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~----~~~g----~L~i~~v~~~D~G~ 421 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISV----LNDG----TLNFSHVLLSDTGV 421 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEE----CTTS----CEECSSCCTTCCEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEE----CCCC----eEEEeecCHHHCEE
Confidence 67788888888999999999999988 99999999954 444322 23322 1122 38899999999999
Q ss_pred EEEEEEcCCEEEEEe
Q psy15667 78 YACVAENRAGTCEIT 92 (286)
Q Consensus 78 Y~C~a~n~~g~~~~~ 92 (286)
|+|.|.|..|..+.+
T Consensus 422 Y~C~a~N~~G~~~~~ 436 (452)
T 3zyi_A 422 YTCMVTNVAGNSNAS 436 (452)
T ss_dssp EEEEEECSSCEEEEE
T ss_pred EEEEEEcCCCcEEEE
Confidence 999999999986543
No 471
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.00 E-value=3.9e-10 Score=87.46 Aligned_cols=74 Identities=19% Similarity=0.242 Sum_probs=54.7
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+ +..+.+|++++|.|.+.+. .+.+.|+|||..+... .. . ......|.|.+++.+|+|.|+|.
T Consensus 99 ~p~i~~~p-~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~--~~-----~--~~~~~~L~I~~v~~~d~G~Y~C~ 167 (188)
T 1oll_A 99 TPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ--RG-----Y--GKVQAEFPLGPVTTAHRGTYRCF 167 (188)
T ss_dssp CCEEEEES-CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEEE--EE-----E--CSSEEEEEEEECCGGGCEEEEEE
T ss_pred CCeEEECC-CCccccCCEEEEEEEcCCC-CCEEEEEECCcccccc--cc-----C--CCceeEEEECCCCcCCCcEEEEE
Confidence 46665444 5678999999999998764 5789999998766431 10 0 11123589999999999999999
Q ss_pred EEcCC
Q psy15667 82 AENRA 86 (286)
Q Consensus 82 a~n~~ 86 (286)
|.|..
T Consensus 168 a~n~~ 172 (188)
T 1oll_A 168 GSYNN 172 (188)
T ss_dssp CEEET
T ss_pred EEcCC
Confidence 98854
No 472
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=98.99 E-value=6e-09 Score=94.39 Aligned_cols=40 Identities=13% Similarity=0.300 Sum_probs=29.6
Q ss_pred eEecccccc-ccCCCcEEEEEEeecCCC----CeeEEeeCCEEcC
Q psy15667 5 LTYSFIEQT-LQPGPAVSLKCIASGNPT----PDIGWTLDGFELP 44 (286)
Q Consensus 5 ~~~~~~~~~-~~~G~~~~l~C~~~g~p~----p~v~W~~~~~~l~ 44 (286)
|.+.+.... +..+++..|.|.+.+.++ .+|+|+++++.+.
T Consensus 345 fl~~~~~~~~~~~~~~~~l~C~~~~~~p~~~~i~v~W~~~~~~~~ 389 (551)
T 1ntl_A 345 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVH 389 (551)
T ss_pred EEcCCCcccceeeccCcceEEEEEecccCCCceEEEEEECCcccc
Confidence 444444444 678899999999998755 4799999987653
No 473
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.99 E-value=1.6e-09 Score=83.56 Aligned_cols=124 Identities=12% Similarity=0.203 Sum_probs=83.3
Q ss_pred ccccccCCCcEEEEEEeec-CCCCeeEEeeC-CEEcC---CC-----------CeeEeceEEecccceeEEEEEcccccC
Q psy15667 10 IEQTLQPGPAVSLKCIASG-NPTPDIGWTLD-GFELP---TN-----------NRFVIGQFVSGHGDVISHVNISHVTVE 73 (286)
Q Consensus 10 ~~~~~~~G~~~~l~C~~~g-~p~p~v~W~~~-~~~l~---~~-----------~~~~~~~~~~~~~~~~~~l~I~~~~~~ 73 (286)
..+.+.+|++++|.|.+.+ .+.+.|.|+|+ +..+. .+ .|+.+. .++ .+|.|.+++.+
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~-----~~~--~sL~I~~v~~~ 79 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD-----KTN--GALRIYNVSKE 79 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC-----TTT--CCEEECSCCGG
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe-----CCC--ccEEEcCCCHH
Confidence 3467899999999998754 34789999994 33221 11 222210 111 24899999999
Q ss_pred CCeEEEEEEEcCCE-E--EEE----------------------ecCCCCCeeEEEeeCCccCcCCCCcceEEEccCCCCC
Q psy15667 74 DGGEYACVAENRAG-T--CEI----------------------TPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGRED 128 (286)
Q Consensus 74 D~G~Y~C~a~n~~g-~--~~~----------------------~~~~~~~~~~~W~~~g~~l~~~~~~~~l~i~~v~~~d 128 (286)
|+|.|+|.+.+... . ..+ .....+++.+.|++|+..+.. .....|.+.. .+|
T Consensus 80 D~G~Y~C~v~~~~~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~-~~~~~l~~~~--~~d 156 (180)
T 2dru_A 80 DRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRS-LRQKTMSYQW--TNL 156 (180)
T ss_dssp GCEEEEEEEESSSEEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEE-ESSSEEEEEC--SCC
T ss_pred HCeEEEEEEEcCCeEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECcC-CCCCEEEEEE--hhc
Confidence 99999999877641 1 111 111124578999999998762 2234566633 789
Q ss_pred CeeEEEEEEcCCcce
Q psy15667 129 RGIYQCIARRSDGDV 143 (286)
Q Consensus 129 ~G~Y~C~a~~~~g~~ 143 (286)
+|.|+|.|.|..+..
T Consensus 157 ~g~Y~C~a~N~~~~~ 171 (180)
T 2dru_A 157 RAPFKCKAVNRVSQE 171 (180)
T ss_dssp SSCEEEEEEETTEEE
T ss_pred CccEEEEEecCcCcc
Confidence 999999999988754
No 474
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.99 E-value=5.8e-10 Score=90.93 Aligned_cols=78 Identities=26% Similarity=0.245 Sum_probs=57.5
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEee--CCEEcC------------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL--DGFELP------------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~--~~~~l~------------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.|...+..+.+.+|++++|.|.+.+.|.+.+.|+| +|..+. ...|+.+.. . .....|.|.+
T Consensus 141 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~----~-~~~~~L~I~~ 215 (257)
T 1f3r_B 141 KLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG----S-GTDYTLTISS 215 (257)
T ss_dssp CSCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE----E-BTEEEEEECS
T ss_pred EEEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEec----C-CCEEEEEECC
Confidence 34445566789999999999999999989999999 554331 123443311 1 1224699999
Q ss_pred cccCCCeEEEEEEEcCC
Q psy15667 70 VTVEDGGEYACVAENRA 86 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~~ 86 (286)
++.+|+|.|.|.|.|..
T Consensus 216 v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 216 LQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CCGGGCSEEEEEEESSS
T ss_pred CChhhCEEEEEEEeCCC
Confidence 99999999999999964
No 475
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=98.99 E-value=2.1e-09 Score=76.27 Aligned_cols=79 Identities=20% Similarity=0.346 Sum_probs=56.8
Q ss_pred eeEeccccccccCCCcEEEEEEeecCC--CCeeEEeeCC--EE----cCCCCeeEeceEEecccceeEEEEEcccccCCC
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNP--TPDIGWTLDG--FE----LPTNNRFVIGQFVSGHGDVISHVNISHVTVEDG 75 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p--~p~v~W~~~~--~~----l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~ 75 (286)
.+...+..+++.+|++|+|.|.+.+.+ .+.+.|+++. .. +..+.|+.... . .......|+|.+++.+|+
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~r~~~~~--~-~~~~~~~L~I~~~~~~Ds 78 (113)
T 1sq2_N 2 RVDQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETV--N-SGSKSFSLRINDLTVEDG 78 (113)
T ss_dssp CEEEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEECCCBTTEEEEE--E-TTTTEEEEEECSCCGGGC
T ss_pred ceEeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeEEeCCCEEEEE--e-CCCCEEEEEECCCChhhC
Confidence 355667778999999999999998765 5789999863 21 22345554321 1 112234699999999999
Q ss_pred eEEEEEEEcC
Q psy15667 76 GEYACVAENR 85 (286)
Q Consensus 76 G~Y~C~a~n~ 85 (286)
|.|.|.+.+.
T Consensus 79 G~Y~C~~~~~ 88 (113)
T 1sq2_N 79 GTYRCGLGVA 88 (113)
T ss_dssp EEEEEEECBT
T ss_pred EEEEEEEEeC
Confidence 9999998873
No 476
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.99 E-value=4e-10 Score=99.61 Aligned_cols=79 Identities=27% Similarity=0.426 Sum_probs=60.5
Q ss_pred CCCCCCCeEEEEEeeecCCCCCeEEEEeCC-eeCCCCC-CceeeecCCCeeeEEEcccCCCCCeEEEEEEEecccceeeE
Q psy15667 203 DGLPEGARTRVICGVTHGDPPLTIRWLKDG-KPLSPRF-PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAAQARYS 280 (286)
Q Consensus 203 ~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g-~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 280 (286)
..+.+|+.+.|.|.+. |.|.+.|++++ ..+.... ...+... ..++|.|.+++.+|+|.|+|.|.|.+|....+
T Consensus 362 ~~v~~G~~~~l~C~~~---p~p~i~W~~~~~~~~~~~~~~~~~~~~--~~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~ 436 (452)
T 3zyi_A 362 LNISEGRMAELKCRTP---PMSSVKWLLPNGTVLSHASRHPRISVL--NDGTLNFSHVLLSDTGVYTCMVTNVAGNSNAS 436 (452)
T ss_dssp EECCTTSCCEECCBCC---TTSEEEEECTTSCEECSSCCCSSCEEC--TTSCEECSSCCTTCCEEEEEEEECSSCEEEEE
T ss_pred ccccCCCEEEEEEeCC---CCCcEEEEeCCCcEeccCCCCCCEEEC--CCCeEEEeecCHHHCEEEEEEEEcCCCcEEEE
Confidence 3578999999999875 88999999954 4443221 1111111 24579999999999999999999999999999
Q ss_pred EEEEEC
Q psy15667 281 SKLQVK 286 (286)
Q Consensus 281 ~~L~V~ 286 (286)
+.|.|+
T Consensus 437 ~~l~v~ 442 (452)
T 3zyi_A 437 AYLNVS 442 (452)
T ss_dssp EEEEC-
T ss_pred EEEEEE
Confidence 999874
No 477
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.98 E-value=1.9e-10 Score=90.57 Aligned_cols=63 Identities=21% Similarity=0.444 Sum_probs=50.5
Q ss_pred cCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCC--eeEeceEEecccceeEEEEEccc-ccCCCeEEEEEEEcCCE
Q psy15667 15 QPGPAVSLKCIASGNPTPDIGWTLDGFELPTNN--RFVIGQFVSGHGDVISHVNISHV-TVEDGGEYACVAENRAG 87 (286)
Q Consensus 15 ~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~I~~~-~~~D~G~Y~C~a~n~~g 87 (286)
.+|++++|.|. |.|.|.+.|++|+..+.... +... ... ..|.|.++ +.+|+|.|+|.|.|..|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~----~~~----~~L~I~~v~~~~D~G~Y~C~A~N~~g 191 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIG----SDE----DHLSLKEFSELEQSGYYVCYPRGSKP 191 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEE----EET----TEEEETTCCHHHHCEEEEEEETTSCG
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEe----cCC----CEEEEeeCCccccCEEEEEEeccCCC
Confidence 39999999998 78999999999999886532 2211 111 14899999 99999999999999876
No 478
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.98 E-value=1.3e-09 Score=77.28 Aligned_cols=80 Identities=24% Similarity=0.374 Sum_probs=55.2
Q ss_pred eEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--EEc----------CCCCeeEeceEEecccceeEEEEEccccc
Q psy15667 5 LTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--FEL----------PTNNRFVIGQFVSGHGDVISHVNISHVTV 72 (286)
Q Consensus 5 ~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~~l----------~~~~~~~~~~~~~~~~~~~~~l~I~~~~~ 72 (286)
+...+.++.+.+|++++|.|.+.+.+ +.+.|+|+. ..+ ..+.|+.... .........|.|.+++.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~--~~~~~~~~~L~I~~v~~ 80 (113)
T 1h5b_A 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAF--DSERARYSTLHIRDAQL 80 (113)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEEC--CSSSSSEEEEEECSCCG
T ss_pred eEECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEE--ccCCCCEEEEEECCCCh
Confidence 45567778899999999999998765 689999853 111 0123333210 00012234699999999
Q ss_pred CCCeEEEEEEEcCCE
Q psy15667 73 EDGGEYACVAENRAG 87 (286)
Q Consensus 73 ~D~G~Y~C~a~n~~g 87 (286)
+|+|.|.|.+.|..|
T Consensus 81 ~DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 81 EDSGTYFCAAEASSG 95 (113)
T ss_dssp GGCEEEEEEEECSSS
T ss_pred hhCEEEEEEEecCCC
Confidence 999999999998643
No 479
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.98 E-value=4.3e-09 Score=83.82 Aligned_cols=82 Identities=17% Similarity=0.244 Sum_probs=59.3
Q ss_pred CeeEeccccccccCCCcE-EEEEEe-ecCCCCeeEEeeCCEEcCCCC----eeEeceEEe-c-ccc--eeEEEEEccccc
Q psy15667 3 PILTYSFIEQTLQPGPAV-SLKCIA-SGNPTPDIGWTLDGFELPTNN----RFVIGQFVS-G-HGD--VISHVNISHVTV 72 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~-~l~C~~-~g~p~p~v~W~~~~~~l~~~~----~~~~~~~~~-~-~~~--~~~~l~I~~~~~ 72 (286)
|.|...+....+.+|+.+ +|.|.+ .|.|.|.+.|++++..+.... ++.+..... . .+. ....|.|.....
T Consensus 119 ~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~ 198 (231)
T 2pet_A 119 TEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKD 198 (231)
T ss_dssp CEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGG
T ss_pred cEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchh
Confidence 566666667778899998 999999 899999999999999987554 443321111 1 111 113477876666
Q ss_pred CCCeEEEEEEEc
Q psy15667 73 EDGGEYACVAEN 84 (286)
Q Consensus 73 ~D~G~Y~C~a~n 84 (286)
+|+|.|+|.|.|
T Consensus 199 dd~g~Y~C~a~n 210 (231)
T 2pet_A 199 DRDASFHCAAHY 210 (231)
T ss_dssp GGGCEEEEEEEE
T ss_pred hCCceEEEEEEc
Confidence 679999999999
No 480
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.98 E-value=1.5e-09 Score=85.09 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=54.4
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACV 81 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~ 81 (286)
+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|||..+........ . ..+.....|.|.+++ |+|.|+|.
T Consensus 108 ~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~--~--~~~~~~~~L~i~~v~--d~G~Y~C~ 179 (201)
T 1nkr_A 108 KPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGP--K--VNGTFQADFPLGPAT--HGGTYRCF 179 (201)
T ss_dssp CCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEE--E--ETTEEEEEEEEEECC--SCEEEEEE
T ss_pred CCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCccccccc--c--cCCceEEEEEeCCcC--CCeeEEEE
Confidence 456665553 57899999999999886 5688999999987653221111 0 011112358899998 99999999
Q ss_pred EEcCC
Q psy15667 82 AENRA 86 (286)
Q Consensus 82 a~n~~ 86 (286)
|.+..
T Consensus 180 a~~~~ 184 (201)
T 1nkr_A 180 GSFHD 184 (201)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 98754
No 481
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.98 E-value=1.9e-09 Score=84.28 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=51.5
Q ss_pred CCCCeEEEEEeeecCCCC-----CeEEEEe-CCeeCCCCCCceeeec--CCCeeeEEEcccCCCCCeEEEEEEEecccce
Q psy15667 206 PEGARTRVICGVTHGDPP-----LTIRWLK-DGKPLSPRFPVNVSDL--DSFSSLLSINSVSAAHSGEYTCVASNTAAQA 277 (286)
Q Consensus 206 ~~g~~~~l~c~~~~~~p~-----~~~~W~~-~g~~~~~~~~~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 277 (286)
.+|+.+.|.|.+. +.|. +.+.|+| ++.......+..+... ......|.|.+++.+|+|.|+|.|.|..|..
T Consensus 15 ~~G~~v~L~C~~~-~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~ 93 (202)
T 3bp6_B 15 DVGSSVSLECDFD-RRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWD 93 (202)
T ss_dssp ETTSCEEEEEEEC-TTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eCCCcEEEEEEec-CCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcc
Confidence 3455555555443 3333 6788998 4443333334433221 1135689999999999999999999999988
Q ss_pred eeEEEEEE
Q psy15667 278 RYSSKLQV 285 (286)
Q Consensus 278 ~~~~~L~V 285 (286)
...+.|.|
T Consensus 94 ~~~~~l~V 101 (202)
T 3bp6_B 94 YKYLTVKV 101 (202)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 88888876
No 482
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.97 E-value=1.1e-08 Score=78.85 Aligned_cols=70 Identities=10% Similarity=0.132 Sum_probs=41.5
Q ss_pred CCCCCeEEEEEeeecCCCCCe--EEEEeCCeeCCCCCCceeeecCCCeeeEEEcccCCCCCe-EEEEEEEecc
Q psy15667 205 LPEGARTRVICGVTHGDPPLT--IRWLKDGKPLSPRFPVNVSDLDSFSSLLSINSVSAAHSG-EYTCVASNTA 274 (286)
Q Consensus 205 ~~~g~~~~l~c~~~~~~p~~~--~~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G-~Y~C~a~N~~ 274 (286)
+.+|+.+.|.|.+..+.|... +.|+|+++.+....-............+..-.+..+|.| .|+|.|.-.+
T Consensus 100 ~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~~~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 100 VAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp ECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEEEEC
T ss_pred ccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEEecchhhCCceEEEEEEecC
Confidence 556777777777776666654 789999987732100000000011112233456677877 9999999876
No 483
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.97 E-value=2.7e-09 Score=75.34 Aligned_cols=77 Identities=26% Similarity=0.307 Sum_probs=56.2
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCC--E---Ec-C--------CCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDG--F---EL-P--------TNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~--~---~l-~--------~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.+...+..+++.+|++++|.|.+.+.+.+.+.|++.. . .| . ...|+.... . .....|+|.+
T Consensus 6 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~----~-~~~~~L~I~~ 80 (111)
T 1i3g_L 6 VLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG----S-GTDFTLTISN 80 (111)
T ss_dssp CEEESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE----E-TTEEEEEESS
T ss_pred eEEEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc----C-CCEEEEEECC
Confidence 4556677789999999999999998888889999853 1 11 1 123443311 1 1223699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|.|.+.+.
T Consensus 81 v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 81 VQSEDLADYFCQQYSS 96 (111)
T ss_dssp CCGGGCSEEEEEECSS
T ss_pred CCHHHCEEEEEEEecC
Confidence 9999999999999874
No 484
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.97 E-value=1.5e-09 Score=88.57 Aligned_cols=79 Identities=24% Similarity=0.309 Sum_probs=58.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCC-----eeEEee--CCEEcC------------CCCeeEeceEEeccccee
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTP-----DIGWTL--DGFELP------------TNNRFVIGQFVSGHGDVI 62 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p-----~v~W~~--~~~~l~------------~~~~~~~~~~~~~~~~~~ 62 (286)
+|.+...+..+.+.+|++++|.|.+.+.|.+ .+.|+| +|..+. ...|+.... ....
T Consensus 121 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-----~~~~ 195 (256)
T 1nqb_A 121 DIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG-----SGTD 195 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-----ETTE
T ss_pred cccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEc-----cCCE
Confidence 3556666777789999999999999998875 999999 565431 123443311 1122
Q ss_pred EEEEEcccccCCCeEEEEEEEcC
Q psy15667 63 SHVNISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 63 ~~l~I~~~~~~D~G~Y~C~a~n~ 85 (286)
..|.|.+++.+|+|.|+|.|.|.
T Consensus 196 ~~L~I~~v~~~DsG~Y~C~a~~~ 218 (256)
T 1nqb_A 196 FTLKISRVEAEDLGVYYCFQGSH 218 (256)
T ss_dssp EEEEESSCCGGGCEEEEEEECSS
T ss_pred EEEEECCCChHHCEEEEEEEccC
Confidence 46999999999999999999874
No 485
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.97 E-value=1.8e-09 Score=85.60 Aligned_cols=83 Identities=23% Similarity=0.467 Sum_probs=55.9
Q ss_pred CeeEeccccccccCCCcEEEEEEe-ecCCCCeeEEee-CCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEE
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIA-SGNPTPDIGWTL-DGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYAC 80 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~-~g~p~p~v~W~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C 80 (286)
|.+...+ ...+.+|++++|.|.+ .|.|.|.+.|++ ++..+....... .. ....+....|.|.++..+|+|.|+|
T Consensus 112 p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~--~~-~~~~~~~~~l~i~~v~~~d~G~Y~C 187 (222)
T 4i0k_A 112 PSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTS--QM-ANERGLFDVHSVLRVVLGANGTYSC 187 (222)
T ss_dssp CEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEE--EE-ECTTSCEEEEEEEEEECCTTCEEEE
T ss_pred CcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCccee--EE-cCCCCeEEEEEEEEEEeCCCCEEEE
Confidence 5555443 4477899999999999 789999999999 455554322221 11 1123334457899999999999999
Q ss_pred EEEcCCEEE
Q psy15667 81 VAENRAGTC 89 (286)
Q Consensus 81 ~a~n~~g~~ 89 (286)
.|.|..|..
T Consensus 188 ~a~n~~g~~ 196 (222)
T 4i0k_A 188 LVRNPVLQQ 196 (222)
T ss_dssp EEEETTTTE
T ss_pred EEECCCCCC
Confidence 999987644
No 486
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.96 E-value=2.3e-09 Score=76.11 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.3
Q ss_pred eeeEEEcccCCCCCeEEEEEEEe-cccceeeEEEEEE
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASN-TAAQARYSSKLQV 285 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N-~~g~~~~~~~L~V 285 (286)
...|.|.+++.+|+|.|+|.+.| ..|.....+.|.|
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V 114 (118)
T 3udw_C 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114 (118)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEEeecChHHCeEEEEEEEECCCCCccceEEEEE
Confidence 55899999999999999999999 7788888888876
No 487
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.95 E-value=1.4e-09 Score=88.52 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=59.2
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCCCeeEEeeC--CEEcC------------CCCeeEeceEEecccceeEEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLD--GFELP------------TNNRFVIGQFVSGHGDVISHVNI 67 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--~~~l~------------~~~~~~~~~~~~~~~~~~~~l~I 67 (286)
+|.+...+....+.+|++++|.|.+.+.|.+.+.|+|+ +..+. ...|+.... . .....|.|
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~-~~~~~L~I 212 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSR----S-GSDYSLTI 212 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEE----E-TTEEEEEE
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEec----C-CCEEEEEE
Confidence 56777777778999999999999999999999999984 22211 123443211 1 12345999
Q ss_pred cccccCCCeEEEEEEEcC
Q psy15667 68 SHVTVEDGGEYACVAENR 85 (286)
Q Consensus 68 ~~~~~~D~G~Y~C~a~n~ 85 (286)
.+++.+|+|.|.|.|.|.
T Consensus 213 ~~v~~~D~G~Y~C~~~~~ 230 (256)
T 3umt_A 213 SSLESEDFVDYYCLQYAS 230 (256)
T ss_dssp CSCCGGGCSEEEEEECSS
T ss_pred CCCChhHCEEEEEEEeeC
Confidence 999999999999999884
No 488
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.95 E-value=4.5e-09 Score=82.05 Aligned_cols=73 Identities=16% Similarity=0.287 Sum_probs=52.6
Q ss_pred cCCCcEEEEEEee-cCCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEEEcCCEEEE
Q psy15667 15 QPGPAVSLKCIAS-GNPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVAENRAGTCE 90 (286)
Q Consensus 15 ~~G~~~~l~C~~~-g~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a~n~~g~~~ 90 (286)
..|+.++|.|.+. |.|.|.|+|++||..|........ ....++......+..+..+|+|.|+|.|.|..|...
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~---~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s 192 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVS---QDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVN 192 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEE---ECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEE
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECccccceEE---ecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceee
Confidence 4589999999995 999999999999999875433211 111223322234456677899999999999887654
No 489
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.95 E-value=8.4e-10 Score=87.03 Aligned_cols=85 Identities=14% Similarity=0.215 Sum_probs=60.3
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCC--CeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPT--PDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~--p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.|...+.+..+..|+.++|.|.+.|.|+ +.+.|++||..+..+............+. ....|.|.....+|+|.
T Consensus 112 ~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 191 (213)
T 3r06_A 112 KPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNL 191 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCe
Confidence 677887777777888999999999998654 48999999999865320100000011111 12358899999999999
Q ss_pred EEEEEEcCC
Q psy15667 78 YACVAENRA 86 (286)
Q Consensus 78 Y~C~a~n~~ 86 (286)
|+|.|.|..
T Consensus 192 YtC~v~n~~ 200 (213)
T 3r06_A 192 YTCEVTHKT 200 (213)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEecc
Confidence 999999964
No 490
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.95 E-value=1e-08 Score=71.92 Aligned_cols=96 Identities=18% Similarity=0.234 Sum_probs=55.3
Q ss_pred ceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccCCCCCCCeEEEEEeeecCCCCCeEEEEeCCeeC-CCCCCc
Q psy15667 163 KVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFDGLPEGARTRVICGVTHGDPPLTIRWLKDGKPL-SPRFPV 241 (286)
Q Consensus 163 ~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~-~~~~~~ 241 (286)
.+.+.+|++++|.|.+.+.|.+.+.|.+..+... ..+ +. +.++..- ....++
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~--------------~~~------------l~-~~~~~~~~~~~~r~ 62 (108)
T 1jhl_L 10 YLVASPGETITINCRASKSISKSLAWYQEKPGKT--------------NNL------------LI-YSGSTLQSGIPSRF 62 (108)
T ss_dssp EEEECTTSCEEEEEEESSCCTTCEEEEEECTTSC--------------CEE------------EE-ETTTEECTTCCTTE
T ss_pred eeEEcCCCCEEEEeEECCCCCceEEEEEECCCCC--------------CEE------------EE-EcCCCcCCCCCceE
Confidence 3566788888888888887777888877431100 000 00 0000000 011233
Q ss_pred eeeecCCCeeeEEEcccCCCCCeEEEEEEEeccc-ceeeEEEEEEC
Q psy15667 242 NVSDLDSFSSLLSINSVSAAHSGEYTCVASNTAA-QARYSSKLQVK 286 (286)
Q Consensus 242 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~L~V~ 286 (286)
.+.. ......|.|.+++.+|+|.|.|.|.|... .....+.|.|+
T Consensus 63 ~~~~-~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 63 SGSG-SGTDFTLTISSLEPEDFAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp EEEE-SSSEEEEEECSCCTTCCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEe-cCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEE
Confidence 3222 22356899999999999999999999732 22234456664
No 491
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.95 E-value=1.7e-09 Score=89.46 Aligned_cols=77 Identities=25% Similarity=0.361 Sum_probs=57.9
Q ss_pred CeeEeccccccccCCCcEEEEEEeecCCCCeeEEee--CCEEcC------------CCCeeEeceEEecccceeEEEEEc
Q psy15667 3 PILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTL--DGFELP------------TNNRFVIGQFVSGHGDVISHVNIS 68 (286)
Q Consensus 3 p~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~--~~~~l~------------~~~~~~~~~~~~~~~~~~~~l~I~ 68 (286)
|.+...+..+.+.+|++++|.|.+.+.| +.+.|+| +|..+. .+.|+.... . .....|.|.
T Consensus 163 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~----~-~~~~~L~I~ 236 (282)
T 1qok_A 163 NVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSG----S-GTSYSLTIS 236 (282)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE----E-TTEEEEEES
T ss_pred eEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEec----C-CCEEEEEEc
Confidence 4566667777899999999999999999 8999999 565431 134443321 1 122369999
Q ss_pred ccccCCCeEEEEEEEcC
Q psy15667 69 HVTVEDGGEYACVAENR 85 (286)
Q Consensus 69 ~~~~~D~G~Y~C~a~n~ 85 (286)
+++.+|+|.|.|.|.|.
T Consensus 237 ~v~~~DsG~Y~C~a~~~ 253 (282)
T 1qok_A 237 RMEAEDAATYYCQQRSS 253 (282)
T ss_dssp SCCGGGCEEEEEEECSS
T ss_pred cCChhHCEEEEEEEeeC
Confidence 99999999999999874
No 492
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.95 E-value=1.3e-08 Score=73.46 Aligned_cols=36 Identities=14% Similarity=0.359 Sum_probs=33.4
Q ss_pred eeeEEEcccCCCCCeEEEEEEEecccceeeEEEEEE
Q psy15667 250 SSLLSINSVSAAHSGEYTCVASNTAAQARYSSKLQV 285 (286)
Q Consensus 250 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~L~V 285 (286)
+..|.|.+++.+|+|.|+|.+.|..|....++.|.|
T Consensus 83 ~~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 83 NASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 457999999999999999999999999999999887
No 493
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.95 E-value=1.1e-09 Score=87.88 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=57.4
Q ss_pred eeEeccccccccCCCcEEEEEEeecCCCCeeEEeeCCE--E---c---------CCCCeeEeceEEecccceeEEEEEcc
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNPTPDIGWTLDGF--E---L---------PTNNRFVIGQFVSGHGDVISHVNISH 69 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~--~---l---------~~~~~~~~~~~~~~~~~~~~~l~I~~ 69 (286)
.|...+....+.+|++++|.|.+.+.|.|.+.|+|++. . + ..+.++.+.. . .......|.|.+
T Consensus 129 ~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~-~~~~~~~L~I~~ 205 (238)
T 2p1y_A 129 QVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFF--N-KREKKLSLHIAD 205 (238)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEE--E-TTTTEEEEEETT
T ss_pred eEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEe--c-CCCCeEEEEEcC
Confidence 56666777789999999999999999999999999641 1 1 0122332210 0 111234699999
Q ss_pred cccCCCeEEEEEEEcC
Q psy15667 70 VTVEDGGEYACVAENR 85 (286)
Q Consensus 70 ~~~~D~G~Y~C~a~n~ 85 (286)
++.+|+|.|+|.|.|.
T Consensus 206 v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 206 SQPGDSATYFCAAIDT 221 (238)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CCHHHCEEEEEEEeeC
Confidence 9999999999999986
No 494
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.94 E-value=5.5e-08 Score=81.49 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=52.8
Q ss_pred ccccccccCCCcEEEEEEeecC-----CCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEEEEE
Q psy15667 8 SFIEQTLQPGPAVSLKCIASGN-----PTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYACVA 82 (286)
Q Consensus 8 ~~~~~~~~~G~~~~l~C~~~g~-----p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~C~a 82 (286)
.+.+.++..|++++|.|.+.++ |.+.+.|.+||..|+.+ ++.. ..++.....|.|.++...|+|.|+|.+
T Consensus 6 ~p~~~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~g~~l~~~-~~~~----~~~~~~~~~L~i~~~~~~d~g~y~c~~ 80 (313)
T 2d9q_B 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGG-RQQR----LSDGTQESIITLPHLNHTQAFLSCSLN 80 (313)
T ss_dssp EESCSEECTTCCEEEEECCCTTSCSSCSCSCCEEESSSCBCTTC-EECC----CSSSCCCEEEEESCCCSSEEEEEEEEE
T ss_pred ECCCcEEcCCCCEEEEEEECCCCCCCCcccceEEEeCCEECCcc-ceEE----EecCeEEEEEEEeccCCCccceEEeee
Confidence 3456789999999999999997 67899999999888543 2210 112221235778888888888888877
Q ss_pred EcCC
Q psy15667 83 ENRA 86 (286)
Q Consensus 83 ~n~~ 86 (286)
.+..
T Consensus 81 ~~~~ 84 (313)
T 2d9q_B 81 WGNS 84 (313)
T ss_dssp SSSS
T ss_pred cCCC
Confidence 5543
No 495
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.94 E-value=9.7e-10 Score=88.04 Aligned_cols=85 Identities=16% Similarity=0.256 Sum_probs=60.0
Q ss_pred CCeeEeccccccccCCCcEEEEEEeec-CC-CCeeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASG-NP-TPDIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p-~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
+|.+.....+..+.+|+.++|.|.+.| .| .+.+.|++||..+..+............+. ....|.|..+..+|+|.
T Consensus 135 ~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ 214 (237)
T 3sob_L 135 APSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKV 214 (237)
T ss_dssp CCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCE
T ss_pred CCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCc
Confidence 677777666666777999999999998 45 589999999998875320000000011111 12458899999999999
Q ss_pred EEEEEEcCC
Q psy15667 78 YACVAENRA 86 (286)
Q Consensus 78 Y~C~a~n~~ 86 (286)
|+|.|.|..
T Consensus 215 Y~C~a~n~~ 223 (237)
T 3sob_L 215 YACEVTHQG 223 (237)
T ss_dssp EEEEEECTT
T ss_pred EEEEEeeCC
Confidence 999999975
No 496
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.94 E-value=2.8e-09 Score=87.37 Aligned_cols=117 Identities=16% Similarity=0.155 Sum_probs=52.3
Q ss_pred CCCCCCeeEEEEEEcCCcceeeeeeEEEEcCCCceecCCceEEecCCCEEEEeeEeeecCCeEEEEEcCCcccccccccC
Q psy15667 124 VGREDRGIYQCIARRSDGDVAQGSAELQLGGLPYVRLIPKVTAIDGEGLSIKCPVAGYPIEEVHWEKVPPKIESFAFPFD 203 (286)
Q Consensus 124 v~~~d~G~Y~C~a~~~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~g~~~~l~c~~~~~p~~~v~w~~~~~~~~~~~~~~~ 203 (286)
..+.|.+.|.|.+.+..|... ....+.|. .....+.+.+|++++|.|.+.+ +.+.+.|.+..+.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~-~~~~~~v~-----~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~--------- 66 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSG-GGGGMKVI-----QTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKN--------- 66 (270)
T ss_dssp --------------------------CCCE-----EECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTT---------
T ss_pred chhhhHHHHHHHHhccCCccc-cccceeEE-----eCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCC---------
Confidence 357899999999998766432 22222221 1223467788999999998765 6678888763211
Q ss_pred CCCCCCeEEEEEeeecCCCCCeEEEEeCCeeCCCCC----CceeeecCCCeeeEEEcccCCCCCeEEEEEEEec
Q psy15667 204 GLPEGARTRVICGVTHGDPPLTIRWLKDGKPLSPRF----PVNVSDLDSFSSLLSINSVSAAHSGEYTCVASNT 273 (286)
Q Consensus 204 ~~~~g~~~~l~c~~~~~~p~~~~~W~~~g~~~~~~~----~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 273 (286)
..+..+.+..++....... ++.+.........|.|.+++.+|+|.|.|.+.|.
T Consensus 67 -----------------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 67 -----------------NEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLN 123 (270)
T ss_dssp -----------------CCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESC
T ss_pred -----------------CCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecC
Confidence 1111122223322111110 2222221233568999999999999999999964
No 497
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.93 E-value=2.1e-09 Score=75.95 Aligned_cols=77 Identities=21% Similarity=0.221 Sum_probs=55.3
Q ss_pred eeEeccccccccCCCcEEEEEEeecCC----CCeeEEeeCC--EE---c-C--------CCCeeEeceEEecccceeEEE
Q psy15667 4 ILTYSFIEQTLQPGPAVSLKCIASGNP----TPDIGWTLDG--FE---L-P--------TNNRFVIGQFVSGHGDVISHV 65 (286)
Q Consensus 4 ~~~~~~~~~~~~~G~~~~l~C~~~g~p----~p~v~W~~~~--~~---l-~--------~~~~~~~~~~~~~~~~~~~~l 65 (286)
.+...+..+++.+|++++|.|.+.+.+ .+.+.|+++. .. | . ...|+.... .+ ....|
T Consensus 3 ~v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~----~~-~~~~L 77 (111)
T 1j05_L 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG----SR-TDFTL 77 (111)
T ss_dssp CEEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE----ET-TEEEE
T ss_pred cEEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc----cC-CEEEE
Confidence 355567778999999999999998877 5789999853 21 1 1 123444321 11 22369
Q ss_pred EEcccccCCCeEEEEEEEcC
Q psy15667 66 NISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 66 ~I~~~~~~D~G~Y~C~a~n~ 85 (286)
.|.+++.+|+|.|.|.+.+.
T Consensus 78 ~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 78 IIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp EESSCCGGGCEEEEEEECSS
T ss_pred EECCCCcccCEEEEEEEecC
Confidence 99999999999999999874
No 498
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.92 E-value=1.2e-07 Score=79.06 Aligned_cols=70 Identities=16% Similarity=0.296 Sum_probs=51.3
Q ss_pred eccccccccCCCcEEEEEEeec-------CCCCeeEEeeCCEEcCCCCeeEeceEEecccceeEEEEEcccccCCCeEEE
Q psy15667 7 YSFIEQTLQPGPAVSLKCIASG-------NPTPDIGWTLDGFELPTNNRFVIGQFVSGHGDVISHVNISHVTVEDGGEYA 79 (286)
Q Consensus 7 ~~~~~~~~~~G~~~~l~C~~~g-------~p~p~v~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~I~~~~~~D~G~Y~ 79 (286)
+.+.+.++.+|++++|.|.+.+ .|.|.+.|++||..|+.+ ++.+ . ++. ...|.|.++...| |.|+
T Consensus 9 i~P~~~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~~~-~~~~---~--~~~-~~~L~i~~~~~~~-g~Y~ 80 (303)
T 1i1r_A 9 ISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKE-QYTI---I--NRT-ASSVTFTDIASLN-IQLT 80 (303)
T ss_dssp EESSSCEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECCGG-GCEE---E--ETT-EEEEEECSCCCSE-EEEE
T ss_pred EccCCceEeCCCCEEEEEEECCccccccCCChhheEEEECCEECChh-heee---e--CCc-EEEEEEcCcCCCc-eEEE
Confidence 4567788999999999999996 488999999999988643 3321 1 111 2357788887764 7788
Q ss_pred EEEEc
Q psy15667 80 CVAEN 84 (286)
Q Consensus 80 C~a~n 84 (286)
|.|.+
T Consensus 81 C~a~~ 85 (303)
T 1i1r_A 81 CNILT 85 (303)
T ss_dssp EEEEE
T ss_pred Eeccc
Confidence 87765
No 499
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.92 E-value=2.4e-09 Score=87.07 Aligned_cols=79 Identities=23% Similarity=0.309 Sum_probs=58.9
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecCCC-CeeEEeeC--CEEcC------------CCCeeEeceEEecccceeEEEE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGNPT-PDIGWTLD--GFELP------------TNNRFVIGQFVSGHGDVISHVN 66 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~-p~v~W~~~--~~~l~------------~~~~~~~~~~~~~~~~~~~~l~ 66 (286)
+|.+...+....+.+|++++|.|.+.+.|. +.+.|+|. +..+. ...|+.+.. .+ ....|.
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~-~~~~L~ 223 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSG----SG-TDFTLT 223 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE----ET-TEEEEE
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEc----cC-CEEEEE
Confidence 467777888889999999999999999886 89999983 22211 123443211 11 224599
Q ss_pred EcccccCCCeEEEEEEEcC
Q psy15667 67 ISHVTVEDGGEYACVAENR 85 (286)
Q Consensus 67 I~~~~~~D~G~Y~C~a~n~ 85 (286)
|.+++.+|+|.|.|.|.|.
T Consensus 224 I~~v~~~DsG~Y~C~~~~~ 242 (256)
T 3juy_B 224 ITRVEPEDFALYYCQVYGA 242 (256)
T ss_dssp ESSCCGGGCSEEEEEECCS
T ss_pred ECCCCHhHCEEEEEEEeeC
Confidence 9999999999999999884
No 500
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.91 E-value=1.2e-09 Score=87.32 Aligned_cols=86 Identities=16% Similarity=0.259 Sum_probs=54.1
Q ss_pred CCeeEeccccccccCCCcEEEEEEeecC-CCC-eeEEeeCCEEcCCCCeeEeceEEecccc--eeEEEEEcccccCCCeE
Q psy15667 2 PPILTYSFIEQTLQPGPAVSLKCIASGN-PTP-DIGWTLDGFELPTNNRFVIGQFVSGHGD--VISHVNISHVTVEDGGE 77 (286)
Q Consensus 2 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~p-~v~W~~~~~~l~~~~~~~~~~~~~~~~~--~~~~l~I~~~~~~D~G~ 77 (286)
||.+........+.+|+.++|.|.+.|. |.+ .+.|+|||..+..+...........++. ....|.|..+..+|+|.
T Consensus 134 ~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 213 (233)
T 3bqu_C 134 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 213 (233)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCC
T ss_pred CCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCC
Confidence 6777766665555689999999999985 444 7999999988765411110000011111 22458899999999999
Q ss_pred EEEEEEcCCE
Q psy15667 78 YACVAENRAG 87 (286)
Q Consensus 78 Y~C~a~n~~g 87 (286)
|+|.|.|...
T Consensus 214 Y~C~a~n~~~ 223 (233)
T 3bqu_C 214 YTCEATHKTS 223 (233)
T ss_dssp EEEEEEEC--
T ss_pred EEEEEEeCCC
Confidence 9999999643
Done!