RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15669
         (167 letters)



>d1a44a_ b.17.1.1 (A:) Phosphatidylethanolamine binding protein,
           PEBP {Cow (Bos taurus) [TaxId: 9913]}
          Length = 185

 Score =  142 bits (358), Expect = 4e-44
 Identities = 57/111 (51%), Positives = 76/111 (68%)

Query: 12  DPDAPSRDNPTVKEWHHWLMGNIKGGDLEEADHLSRYIGAGPPKNTGLHRYVFLVYKQPK 71
           DPDAPSR +P  +EWHH+L+ N+KG ++     LS Y+G+GPPK TGLHRYV+LVY+Q  
Sbjct: 69  DPDAPSRKDPKYREWHHFLVVNMKGNNISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQEG 128

Query: 72  FIVFTEHRLLDNSIYGRANFSIAEFAKKYDLGDPIAVNYFEAEYDDYVPTL 122
            +   E  L + S   R  F +A F KKY+LG P+A   ++AE+DDYVP L
Sbjct: 129 PLKCDEPILSNRSGDHRGKFKVASFRKKYELGAPVAGTCYQAEWDDYVPKL 179


>d1qoua_ b.17.1.1 (A:) Centroradialis protein Cen {Garden snapdragon
           (Antirrhinum majus) [TaxId: 4151]}
          Length = 164

 Score =  104 bits (260), Expect = 1e-29
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 5/103 (4%)

Query: 12  DPDAPSRDNPTVKEWHHWLMGNIKGGDLEEADHLSRYIGAGPPKNTGLHRYVFLVYKQPK 71
           DPD P   +P ++E  HW++ +I G                P  N G+HR+VFL++KQ K
Sbjct: 64  DPDVPGPSDPYLREHLHWIVTDIPGTTDSSFGK-EVVSYEMPRPNIGIHRFVFLLFKQKK 122

Query: 72  FIVFTEHRLLDNSIYGRANFSIAEFAKKYDLGDPIAVNYFEAE 114
                   +L   +  R  F+  +F ++ +LG P+A  +F  +
Sbjct: 123 ----RGQAMLSPPVVCRDGFNTRKFTQENELGLPVAAVFFNCQ 161


>d1wpxb1 b.17.1.1 (B:501-719) Carboxypeptidase Y inhibitor {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 219

 Score =  103 bits (257), Expect = 1e-28
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 22/124 (17%)

Query: 12  DPDAPSRDNPTVKEWHHWLMGNIK------------------GGDLEEADHLSRYIGAGP 53
           DPDAPS+ +    E+ H +  ++K                    + + ++ L  Y+G  P
Sbjct: 95  DPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAP 154

Query: 54  PKNTGLHRYVFLVYKQPK---FIVFTEHRLLDNSIYGRANFSIAEFAKKYDLGDPIAVNY 110
           PK +G HRYVFL+YKQPK      F++ +   N  YG     + ++AK+ +L   +A N+
Sbjct: 155 PKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNF 213

Query: 111 FEAE 114
           F AE
Sbjct: 214 FYAE 217


>d1fuxa_ b.17.1.2 (A:) Hypothetical protein YbcL {Escherichia coli
           [TaxId: 562]}
          Length = 165

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 20/77 (25%), Positives = 24/77 (31%), Gaps = 26/77 (33%)

Query: 12  DPDAPSRDNPTVKEWHHWLMGNIKGGDLEEADHLSR---------------------YIG 50
           DPDAP+        W HW + NI            R                     + G
Sbjct: 53  DPDAPTGSG-----WWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGG 107

Query: 51  AGPPKNTGLHRYVFLVY 67
           A PPK    H Y F V+
Sbjct: 108 ACPPKGDKPHHYQFKVW 124


>d1fjja_ b.17.1.2 (A:) Hypothetical protein YbhB {Escherichia coli
           [TaxId: 562]}
          Length = 159

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 26/76 (34%)

Query: 12  DPDAPSRDNPTVKEWHHWLMGNIKGGDLEEAD--------------------HLSRYIGA 51
           DPDAP+        W HW++ N+                               + Y GA
Sbjct: 53  DPDAPTGSG-----WWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGA 107

Query: 52  GPPKNTGLHRYVFLVY 67
            PPK    HRY+F V+
Sbjct: 108 APPKG-ETHRYIFTVH 122


>d1toha_ d.178.1.1 (A:) Tyrosine hydroxylase {Rat (Rattus
           norvegicus) [TaxId: 10116]}
          Length = 336

 Score = 25.5 bits (56), Expect = 3.9
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)

Query: 93  IAEFAKKYDLGDPIA-VNYFEAE 114
           IAE A +Y  G+PI  V Y   E
Sbjct: 45  IAEIAFQYKHGEPIPHVEYTAEE 67


>d1zq7a1 d.309.1.1 (A:1-199) Hypothetical protein MM0484
           {Methanosarcina mazei [TaxId: 2209]}
          Length = 199

 Score = 24.8 bits (54), Expect = 5.5
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 121 TLSQDGRAKFSIANFAEKYKLGEPIAVNFFQAEYDD 156
           TL++ G  +  I +      L E I  +   A   D
Sbjct: 50  TLTEGGLLRGCIGHPYPDSTLKEAILDSAISAATRD 85


>d1mlwa_ d.178.1.1 (A:) Tryptophan hydroxylase {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 290

 Score = 24.8 bits (54), Expect = 6.7
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)

Query: 93  IAEFAKKYDLGDPIA-VNYFEAE 114
            A+ A  Y  GDPI  V + E E
Sbjct: 45  FADLAMNYKHGDPIPKVEFTEEE 67


>d1j8ua_ d.178.1.1 (A:) Phenylalanine hydroxylase, PAH {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 307

 Score = 24.7 bits (54), Expect = 6.8
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 1/23 (4%)

Query: 93  IAEFAKKYDLGDPIA-VNYFEAE 114
            A+ A  Y  G PI  V Y E E
Sbjct: 44  FADIAYNYRHGQPIPRVEYMEEE 66


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0436    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 688,816
Number of extensions: 31725
Number of successful extensions: 73
Number of sequences better than 10.0: 1
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 17
Length of query: 167
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 88
Effective length of database: 1,322,926
Effective search space: 116417488
Effective search space used: 116417488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.4 bits)