Query psy1567
Match_columns 463
No_of_seqs 211 out of 2441
Neff 9.4
Searched_HMMs 13730
Date Fri Aug 16 18:33:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1567.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1567hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hvwa_ g.3.6.2 (A:) Atracotox 45.5 3.4 0.00025 20.3 0.8 11 15-25 4-14 (26)
2 d2o9xa1 a.184.1.1 (A:1-153) Re 14.8 38 0.0028 25.6 2.3 27 6-32 82-108 (153)
3 d2idga1 a.184.1.1 (A:1-160) Hy 12.2 41 0.003 25.7 1.7 23 6-30 70-92 (160)
4 d2axtl1 f.23.31.1 (L:1-37) Pho 10.4 1.3E+02 0.0098 16.0 3.9 25 119-143 13-37 (37)
5 d1d0da_ g.8.1.2 (A:) Anticoagu 10.4 19 0.0014 21.6 -0.7 13 17-29 37-49 (60)
6 d1ttea1 a.5.2.1 (A:161-215) Ub 9.4 70 0.0051 19.4 1.7 25 2-33 6-30 (55)
7 d2nwwa1 f.49.1.1 (A:12-416) Pr 9.4 5.1E+02 0.037 22.1 10.5 63 367-429 33-97 (405)
8 d1e8qa_ g.55.1.1 (A:) Cellulos 8.4 30 0.0022 20.2 -0.4 12 11-22 4-15 (46)
9 d1axha_ g.3.6.2 (A:) Atracotox 8.0 36 0.0026 18.3 -0.1 9 16-24 8-16 (37)
10 d1kg1a_ g.70.1.1 (A:) Necrosis 7.6 64 0.0047 18.7 0.9 9 15-23 49-57 (60)
No 1
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=45.50 E-value=3.4 Score=20.30 Aligned_cols=11 Identities=45% Similarity=0.715 Sum_probs=8.5
Q ss_pred cCCCCCCCCCc
Q psy1567 15 LGAACPSNYNP 25 (463)
Q Consensus 15 ~G~~cP~~~Np 25 (463)
-|-|||-++|-
T Consensus 4 sgqpcpynenc 14 (26)
T d1hvwa_ 4 SGQPCPYNENC 14 (26)
T ss_dssp TTSBCSSTTSB
T ss_pred CCCcCCCCccc
Confidence 37899988874
No 2
>d2o9xa1 a.184.1.1 (A:1-153) Reductase assembly protein AF0173 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=14.84 E-value=38 Score=25.57 Aligned_cols=27 Identities=11% Similarity=0.002 Sum_probs=20.8
Q ss_pred hHHHHHHhhcCCCCCCCCCchHHHHHH
Q psy1567 6 QTFFQFGLRLGAACPSNYNPADYFIQL 32 (463)
Q Consensus 6 ~~~~~yF~~~G~~cP~~~NpADf~ldv 32 (463)
-++.+++.+.|+..+.+..|+||+--.
T Consensus 82 ~~~~~~y~~~Gl~~~~~~e~~Dhl~~e 108 (153)
T d2o9xa1 82 LRAAELYSKYGLNYVYESEPPDHISVE 108 (153)
T ss_dssp HHHHHHHHHTTCCCCCSSSCTTBHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCHHHHH
Confidence 467799999999866556789987643
No 3
>d2idga1 a.184.1.1 (A:1-160) Hypothetical protein AF0160 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=12.21 E-value=41 Score=25.71 Aligned_cols=23 Identities=22% Similarity=0.119 Sum_probs=17.8
Q ss_pred hHHHHHHhhcCCCCCCCCCchHHHH
Q psy1567 6 QTFFQFGLRLGAACPSNYNPADYFI 30 (463)
Q Consensus 6 ~~~~~yF~~~G~~cP~~~NpADf~l 30 (463)
+++.+|+++.|+.. ..+|+||+-
T Consensus 70 ~~v~~FY~~~Gle~--~~ep~DHIa 92 (160)
T d2idga1 70 SVMKDFYERYGFQA--SELHADHIA 92 (160)
T ss_dssp HHHHHHHHHTTCCC--CSSCTTBHH
T ss_pred HHHHHHHHHcCCCC--CCCCCcHHH
Confidence 45557999999985 467999875
No 4
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=10.42 E-value=1.3e+02 Score=16.04 Aligned_cols=25 Identities=20% Similarity=0.457 Sum_probs=14.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhC
Q psy1567 119 DPTLMKVRLLQTLMVSIMIGLIYFG 143 (463)
Q Consensus 119 n~~~~~~r~~~~~~~ali~g~~f~~ 143 (463)
|+..++.-+....++|+++..-|++
T Consensus 13 NrtsLy~GlLlifvl~vLFssYfFN 37 (37)
T d2axtl1 13 NRTSLYLGLLLILVLALLFSSYFFN 37 (37)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhcC
Confidence 3444445555566777777766553
No 5
>d1d0da_ g.8.1.2 (A:) Anticoagulant protein, factor Xa inhibitor {Soft tick (Ornithodoros moubata) [TaxId: 6938]}
Probab=10.37 E-value=19 Score=21.59 Aligned_cols=13 Identities=38% Similarity=0.866 Sum_probs=11.2
Q ss_pred CCCCCCCCchHHH
Q psy1567 17 AACPSNYNPADYF 29 (463)
Q Consensus 17 ~~cP~~~NpADf~ 29 (463)
+.||+..|-+||+
T Consensus 37 wicpe~~~g~dyy 49 (60)
T d1d0da_ 37 WICPEDHTGADYY 49 (60)
T ss_dssp EECTTTCCSCCCC
T ss_pred eECCccCCCccch
Confidence 4799999999986
No 6
>d1ttea1 a.5.2.1 (A:161-215) Ubiquitin-protein ligase ubc1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=9.44 E-value=70 Score=19.37 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=19.7
Q ss_pred CcchhHHHHHHhhcCCCCCCCCCchHHHHHHh
Q psy1567 2 FPQQQTFFQFGLRLGAACPSNYNPADYFIQLL 33 (463)
Q Consensus 2 ~~~~~~~~~yF~~~G~~cP~~~NpADf~ldv~ 33 (463)
+|=-++.++=|+++||| -|-.++++
T Consensus 6 ~Gid~~~V~~f~~mGF~-------rdKvI~VL 30 (55)
T d1ttea1 6 YGIDHDLIDEFESQGFE-------KDKIVEVL 30 (55)
T ss_dssp CCCSHHHHHHHHHHTCC-------HHHHHHHH
T ss_pred hCCCHHHHHHHHHcCCC-------chhHHHHH
Confidence 45667899999999996 46677776
No 7
>d2nwwa1 f.49.1.1 (A:12-416) Proton glutamate symport protein {Pyrococcus horikoshii [TaxId: 53953]}
Probab=9.41 E-value=5.1e+02 Score=22.07 Aligned_cols=63 Identities=14% Similarity=0.307 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcch-HHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy1567 367 YFLCKTLAEVPIFLAIPVIFTSVMYYMVHLNPI-FSR-FLTATLIITMVSTVATSFGYLISCISS 429 (463)
Q Consensus 367 y~la~~~~~l~~~~~~~~i~~~i~y~~~g~~~~-~~~-f~~~~l~~~l~~~~~~~lg~~i~~~~~ 429 (463)
..+++....+...++.++++..+..-..+++.. .++ -......+.++...+..+|..++...+
T Consensus 33 ~~~g~lFi~lL~m~v~PLIf~sii~gi~~L~~~~~gkl~~~ti~~~l~tt~iA~~igl~~~~~~~ 97 (405)
T d2nwwa1 33 KPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFN 97 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346777778888888999999998877776542 333 334445555666667777888777763
No 8
>d1e8qa_ g.55.1.1 (A:) Cellulose docking domain, dockering {Piromyces equi [TaxId: 99929]}
Probab=8.36 E-value=30 Score=20.21 Aligned_cols=12 Identities=25% Similarity=0.498 Sum_probs=8.6
Q ss_pred HHhhcCCCCCCC
Q psy1567 11 FGLRLGAACPSN 22 (463)
Q Consensus 11 yF~~~G~~cP~~ 22 (463)
+.+++||||=.+
T Consensus 4 ws~~lGY~CC~~ 15 (46)
T d1e8qa_ 4 WAQSQGYNCCNN 15 (46)
T ss_dssp SGGGTTCEECSS
T ss_pred cccccCCCcccC
Confidence 467888888654
No 9
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=8.01 E-value=36 Score=18.25 Aligned_cols=9 Identities=56% Similarity=1.066 Sum_probs=5.6
Q ss_pred CCCCCCCCC
Q psy1567 16 GAACPSNYN 24 (463)
Q Consensus 16 G~~cP~~~N 24 (463)
|-|||-++|
T Consensus 8 gqpcpyne~ 16 (37)
T d1axha_ 8 GQPCPYNEN 16 (37)
T ss_dssp TSBCSSGGG
T ss_pred CCcCCCccc
Confidence 667776554
No 10
>d1kg1a_ g.70.1.1 (A:) Necrosis inducing protein 1, NIP1 {Leaf blotch of barley (Rhynchosporium secalis) [TaxId: 38038]}
Probab=7.63 E-value=64 Score=18.72 Aligned_cols=9 Identities=44% Similarity=1.106 Sum_probs=7.2
Q ss_pred cCCCCCCCC
Q psy1567 15 LGAACPSNY 23 (463)
Q Consensus 15 ~G~~cP~~~ 23 (463)
.||.||.++
T Consensus 49 ngfqcptgy 57 (60)
T d1kg1a_ 49 NGFQCPTGY 57 (60)
T ss_dssp SCBCCCTTC
T ss_pred CcccCCccc
Confidence 589999875
Done!