RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15673
(484 letters)
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 171 bits (434), Expect = 3e-48
Identities = 70/267 (26%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 8 VQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIEFL 67
VQ+A+ + R R + + R+ E + ++A + K EA
Sbjct: 64 VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAW 123
Query: 68 ANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLPAAG 127
+ +P GVC I AWNYP ++ A
Sbjct: 124 QCIEYYAGLAPTLSGQHIQLPGGAFAY-----TRREPLGVCAGILAWNYPFMIAAWKCAP 178
Query: 128 AIAAGNVVILKPSEVAPASAKIMAELLPKY-LDNDTFQVVLGGVEETTELLKH-RFDYIF 185
A+A GN V+ KPS + P + I+AE+ + + VV GG E + L H +
Sbjct: 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVS 238
Query: 186 YTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINAGQTCI 245
+TGS GK V + + + + VTLELGGKSPL I +E AVR L + GQ C
Sbjct: 239 FTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCT 298
Query: 246 APDYILCSRQVQAQILNQAKAVLDSWY 272
+ R++ Q L + +
Sbjct: 299 NGTRVFVQREIMPQFLEEVVKRTKAIV 325
Score = 31.6 bits (71), Expect = 0.24
Identities = 3/20 (15%), Positives = 12/20 (60%)
Query: 284 AYHGKYSFNTFTHRKSCLVK 303
+G+ + + ++ K+ +V+
Sbjct: 476 RENGQATVDYYSQLKTVIVE 495
Score = 29.7 bits (66), Expect = 0.94
Identities = 3/19 (15%), Positives = 11/19 (57%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
+G+ + ++ K+ +V+
Sbjct: 477 ENGQATVDYYSQLKTVIVE 495
>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 446
Score = 170 bits (430), Expect = 3e-48
Identities = 132/267 (49%), Positives = 183/267 (68%)
Query: 6 DLVQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIE 65
D V+ AR+ F+SGK++ +FR +QL+ L R+ EN + ++ ALA+DL K++ + E+
Sbjct: 4 DTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVA 63
Query: 66 FLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLPA 125
+ ++ T+ L W E K D +YI+ +P GV L+IGAWNYP L++ P
Sbjct: 64 HVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPM 123
Query: 126 AGAIAAGNVVILKPSEVAPASAKIMAELLPKYLDNDTFQVVLGGVEETTELLKHRFDYIF 185
GA+AAGN VILKPSEV+ A ++A L+P+Y+D + + VV GGV ETTELLK RFD+I
Sbjct: 124 VGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIM 183
Query: 186 YTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINAGQTCI 245
YTGST+VGKIV AA +HLTPVTLELGGKSP Y+D ++++A RR WGK +N+GQTC+
Sbjct: 184 YTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCV 243
Query: 246 APDYILCSRQVQAQILNQAKAVLDSWY 272
APDYILC +Q QI+ + K L +Y
Sbjct: 244 APDYILCDPSIQNQIVEKLKKSLKDFY 270
Score = 38.8 bits (89), Expect = 0.001
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 314 APLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTE 373
+P Y+D ++++A RR WGK +N+GQTC+APDYILC +Q QI+ + K L +Y E
Sbjct: 213 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGE 272
Query: 374 QVQGSKHYCRIVSDKHFQRLKSLVHSSGTIALGGDM 409
+ S+ Y RI++D+HFQR+K G
Sbjct: 273 DAKQSRDYGRIINDRHFQRVKG--LIDNQKVAHGGT 306
Score = 33.4 bits (75), Expect = 0.062
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 285 YHGKYSFNTFTHRKSCLVK 303
YHGK SF TF+HR+SCLVK
Sbjct: 411 YHGKKSFETFSHRRSCLVK 429
Score = 31.5 bits (70), Expect = 0.22
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
YHGK SF TF+HR+SCLVK
Sbjct: 411 YHGKKSFETFSHRRSCLVK 429
Score = 27.2 bits (59), Expect = 5.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 415 PLYIDSSVNIELAVRRFLWGKCINAGQ 441
P Y+D ++++A RR WGK +N+GQ
Sbjct: 214 PCYVDKDCDLDVACRRIAWGKFMNSGQ 240
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 162 bits (411), Expect = 5e-45
Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 8 VQNARDTFDSG---KSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEI 64
V+ AR F G + R R L +L L E ++ LA D K + L ++
Sbjct: 57 VKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDL 116
Query: 65 EFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLP 124
+ + +R ++ P Y +P GVC I WN+PL +
Sbjct: 117 DMVLKCLRYYAGWADKYHGKTIPIDGDFFS----YTRHEPVGVCGQIIPWNFPLLMQAWK 172
Query: 125 AAGAIAAGNVVILKPSEVAPASAKIMAELLPKY-LDNDTFQVVLGGVEETTE-LLKH-RF 181
A+A GNVV++K +E P +A +A L+ + +V G + H
Sbjct: 173 LGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDV 232
Query: 182 DYIFYTGSTSVGK-IVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINA 240
D + +TGST +G+ I A + +L VTLELGGKSP I S +++ AV + + N
Sbjct: 233 DKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQ 292
Query: 241 GQTCIAPDYILCSRQVQAQILNQAKAVLDSWY 272
GQ A + + + ++ A S
Sbjct: 293 GQCSCAGSRTFVQEDIYDEFVERSVARAKSRV 324
Score = 40.4 bits (94), Expect = 4e-04
Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Query: 314 APLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYT- 372
+P I S +++ AV + + N GQ A + + + ++ A S
Sbjct: 267 SPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVG 326
Query: 373 EQVQGSKHYCRIVSDKHFQRLKSLVHSS----GTIALGGDMDASD 413
V + F+++ +++ + GG + A
Sbjct: 327 NPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADR 371
Score = 31.1 bits (70), Expect = 0.34
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 284 AYHGKYSFNTFTHRKSCLVK 303
G+Y +T K+ VK
Sbjct: 469 RELGEYGLQAYTEVKTVTVK 488
Score = 29.2 bits (65), Expect = 1.3
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
G+Y +T K+ VK
Sbjct: 470 ELGEYGLQAYTEVKTVTVK 488
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 159 bits (402), Expect = 8e-44
Identities = 71/272 (26%), Positives = 115/272 (42%), Gaps = 11/272 (4%)
Query: 8 VQNARDTFDSGKS---KPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEI 64
V+ AR F G R R L +L L E ++ LA A + K A L ++
Sbjct: 57 VKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDL 116
Query: 65 EFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLP 124
+R + P Y +P GVC I WN+PL + L
Sbjct: 117 GGCIKTLRYCAGWADKIQGRTIPMDGNFFT----YTRSEPVGVCGQIIPWNFPLLMFLWK 172
Query: 125 AAGAIAAGNVVILKPSEVAPASAKIMAELLPKY-LDNDTFQVVLGGVEETTELLKH--RF 181
A++ GN V++KP+E P +A M L+ + +V G +
Sbjct: 173 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 232
Query: 182 DYIFYTGSTSVGKIVRQAANE-HLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINA 240
D + +TGST VGK++++AA + +L V+LELGGKSP + + +++ AV G +
Sbjct: 233 DKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQ 292
Query: 241 GQTCIAPDYILCSRQVQAQILNQAKAVLDSWY 272
GQ CIA + + + + ++ +
Sbjct: 293 GQCCIAASRLFVEESIYDEFVRRSVERAKKYV 324
Score = 31.5 bits (71), Expect = 0.23
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 284 AYHGKYSFNTFTHRKSCLVK 303
G+Y F+ +T K+ +K
Sbjct: 469 RELGEYGFHEYTEVKTVTIK 488
Score = 29.6 bits (66), Expect = 0.93
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
G+Y F +T K+ +K
Sbjct: 470 ELGEYGFHEYTEVKTVTIK 488
>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW
{Escherichia coli [TaxId: 562]}
Length = 474
Score = 153 bits (388), Expect = 4e-42
Identities = 68/267 (25%), Positives = 107/267 (40%), Gaps = 5/267 (1%)
Query: 8 VQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIEFL 67
V+ A F + R L +L + EEN Q A + + K A EI +
Sbjct: 45 VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAI 104
Query: 68 ANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLPAAG 127
+ R + + I DP GV I WNYPL ++ A
Sbjct: 105 VDVFRFFAGAARCLNGLAAGEYLEGHT---SMIRRDPLGVVASIAPWNYPLMMAAWKLAP 161
Query: 128 AIAAGNVVILKPSEVAPASAKIMAELLPKYLDNDTFQVVLGGVEETTE-LLKH-RFDYIF 185
A+AAGN V+LKPSE+ P +A +AEL ++ G + + L H + +
Sbjct: 162 ALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVS 221
Query: 186 YTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINAGQTCI 245
TGS + G+ + + +ELGGK+P+ + +IE V NAGQ C
Sbjct: 222 LTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCT 281
Query: 246 APDYILCSRQVQAQILNQAKAVLDSWY 272
A I + + ++ + A + +
Sbjct: 282 AACRIYAQKGIYDTLVEKLGAAVATLK 308
Score = 30.9 bits (69), Expect = 0.36
Identities = 4/20 (20%), Positives = 7/20 (35%)
Query: 284 AYHGKYSFNTFTHRKSCLVK 303
Y +T + +VK
Sbjct: 454 KDMSLYGLEDYTVVRHVMVK 473
Score = 29.0 bits (64), Expect = 1.4
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
Y +T + +VK
Sbjct: 455 DMSLYGLEDYTVVRHVMVK 473
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 110 bits (276), Expect = 7e-27
Identities = 58/269 (21%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 8 VQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIEFL 67
+A+ + ++ Y R L ++ + +++ + L+ ++ K + AV +
Sbjct: 45 YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTA 104
Query: 68 ANDVRNTLNHLKQWMTPEKPGKDIANMLDGV-YIYPDPYGVCLIIGAWNYPLQLSLLPAA 126
L+ + G A + + +P G+ L I +NYP+ L+ A
Sbjct: 105 EIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIA 164
Query: 127 GAIAAGNVVILKPSEVAPASAKIMAELLPK-YLDNDTFQVVLGGVEETTE-LLKH-RFDY 183
A+ AGNV+ KP S ++AE + L F + G E + +++H ++
Sbjct: 165 PALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNF 224
Query: 184 IFYTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINAGQT 243
I +TGST +G+ + + A + P+ LELGGK + ++EL + + G +GQ
Sbjct: 225 INFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQR 282
Query: 244 CIAPDYILCSRQVQAQILNQAKAVLDSWY 272
C A +L V +++ + + + +
Sbjct: 283 CTAVKRVLVMESVADELVEKIREKVLALT 311
Score = 35.2 bits (80), Expect = 0.015
Identities = 10/79 (12%), Positives = 28/79 (35%)
Query: 315 PLYIDSSVNIELAVRRFLWGKCINAGQTCIAPDYILCSRQVQAQILNQAKAVLDSWYTEQ 374
+ ++EL + + G +GQ C A +L V +++ + + + +
Sbjct: 255 SAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 314
Query: 375 VQGSKHYCRIVSDKHFQRL 393
+ ++ K +
Sbjct: 315 PEDDADITPLIDTKSADYV 333
Score = 28.7 bits (63), Expect = 1.8
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 284 AYHGKYSFNTFTHRKSCLVK 303
KYS T KS +
Sbjct: 453 IQGVKYSIEAMTTVKSVVFD 472
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 76.5 bits (187), Expect = 2e-15
Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 7/269 (2%)
Query: 8 VQNARDTFD-SGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIEF 66
+ S + P R L++ + E N A L + K K AV E++
Sbjct: 58 LDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKA 116
Query: 67 LANDVRNTLNHLKQWMTPEKPGKDIANMLDG-VYIYPDPYGVCLIIGAWNYPLQLSLLPA 125
+ +R LK+ PG + L+ + +P GV I +NYPL ++
Sbjct: 117 AVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKI 176
Query: 126 AGAIAAGNVVILKPSEVAPASAKIMAELLPKYLDNDTFQ--VVLGGVEETTELLKHRFDY 183
+ GN V++KPS P A + + L + L G E + R
Sbjct: 177 TYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAA 236
Query: 184 IFYTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCINAGQT 243
+ +TGST VG+ V + +ELGG P + +++LA + G AGQ
Sbjct: 237 VSFTGSTEVGERVVKVGGVK--QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQR 294
Query: 244 CIAPDYILCSRQVQAQILNQAKAVLDSWY 272
C A +L R V +++ + L S
Sbjct: 295 CDAIKLVLAERPVYGKLVEEVAKRLSSLR 323
Score = 28.8 bits (63), Expect = 1.9
Identities = 3/19 (15%), Positives = 6/19 (31%)
Query: 285 YHGKYSFNTFTHRKSCLVK 303
Y+ T K+ +
Sbjct: 471 EGIGYAVEAVTAYKTIVFN 489
Score = 26.8 bits (58), Expect = 7.7
Identities = 3/19 (15%), Positives = 6/19 (31%)
Query: 453 YHGKYSFVTFTHRKSCLVK 471
Y+ T K+ +
Sbjct: 471 EGIGYAVEAVTAYKTIVFN 489
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 74.9 bits (183), Expect = 5e-15
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 12/256 (4%)
Query: 8 VQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAVLFEIEFL 67
++ A F + K P E R R L + L +++L L ++ K+ EA ++
Sbjct: 80 LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEA 138
Query: 68 ANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPLQLSLLPAAG 127
+ + ++ P + P G ++I WN+P+ + G
Sbjct: 139 IDFIEYYARAALRYRYPAVEVVPYPGE--DNESFYVPLGAGVVIAPWNFPVAIFTGMIVG 196
Query: 128 AIAAGNVVILKPSEVAPASAKIMAELLPK-YLDNDTFQVVLGGVEETTE-LLKH-RFDYI 184
+A GN VI KP+E A + E+ + + G EE L++H R +I
Sbjct: 197 PVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFI 256
Query: 185 FYTGSTSVGKIVRQAAN------EHLTPVTLELGGKSPLYIDSSVNIELAVRRFLWGKCI 238
+TGS VG + +AA +E GGK+ + +D + + +LA +
Sbjct: 257 NFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYG 316
Query: 239 NAGQTCIAPDYILCSR 254
GQ C A ++ ++
Sbjct: 317 FQGQKCSAASRLILTQ 332
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 67.0 bits (162), Expect = 1e-12
Identities = 36/261 (13%), Positives = 93/261 (35%), Gaps = 12/261 (4%)
Query: 6 DLVQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAV----- 60
+ + R+ +D ++ + + ++++ +E ++++ A D+ K ++ V
Sbjct: 5 EKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLV 64
Query: 61 --LFEIEFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYPL 118
L + +++ + P D DG+ I + I +
Sbjct: 65 DRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRP 124
Query: 119 QLSLLPAAGAIAAGNVVILKPSEVAPAS----AKIMAELLPKYLDNDTFQVVLGGVEETT 174
+++ A+ +GN ++L+ A S + E L + ++ + + +
Sbjct: 125 NVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSL 184
Query: 175 ELLKHRFDYIFYTGSTSVGKIVRQAANEHLTPVTLELGGKSP-LYIDSSVNIELAVRRFL 233
L R G + ++ T LE G + +++D S +++ AV +
Sbjct: 185 VLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVII 244
Query: 234 WGKCINAGQTCIAPDYILCSR 254
K G A ++ +
Sbjct: 245 NAKTQRPGTCNAAEKLLVHEK 265
Score = 27.3 bits (59), Expect = 4.3
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 280 RQGLAYHGKYSFNTFTHRKSCLVKDY 305
Q G T K ++ +Y
Sbjct: 385 TQRFHARGPVGLRELTTYKFVVLGEY 410
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 55.6 bits (133), Expect = 6e-09
Identities = 49/267 (18%), Positives = 94/267 (35%), Gaps = 23/267 (8%)
Query: 1 MVNFGDLVQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEAV 60
M + + +NAR + K+ E R L ++ + N + A DL K+ +
Sbjct: 2 MSSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGL 61
Query: 61 ---------LFE---IEFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVC 108
LF+ E + +++ + L+ + K +++ + L + P GV
Sbjct: 62 ADSLLKRLDLFKGDKFEVMLQGIKD-VAELEDPVGKVKMARELDDGLTLYQVTA-PVGVL 119
Query: 109 LIIGAWNYPLQLSLLPAAGAIAAGNVVILKPSEVAPASAKIMAELLP-------KYLDND 161
L+I + A +I +GN ILK + + + + MA+++
Sbjct: 120 LVIFESRPEVI--ANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVP 177
Query: 162 TFQVVLGGVEETTELLKHRFDYIFYTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDS 221
V L + L + +YI +VR+ + PV G +Y+D
Sbjct: 178 VGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDE 237
Query: 222 SVNIELAVRRFLWGKCINAGQTCIAPD 248
++ A R L K
Sbjct: 238 DADLIKAKRISLDAKTNYPAGCNAMET 264
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Vibrio harveyi [TaxId: 669]}
Length = 504
Score = 42.8 bits (99), Expect = 8e-05
Identities = 15/116 (12%), Positives = 29/116 (25%), Gaps = 8/116 (6%)
Query: 8 VQNARDTFDSGKSKPYEFRRRQLQQLVRLYEENQQDLANALAADLRKHKQEA------VL 61
A + R L+ + E D+ + +
Sbjct: 32 ATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLTGEIARTA 91
Query: 62 FEIEFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYP 117
++ A+ V + H TP + + G + GA N+P
Sbjct: 92 NQLRLFADVVNSGSYHQAILDTPNPTRAPLPKP--DIRRQQIALGPVAVFGASNFP 145
>d2p0ta1 a.290.1.1 (A:22-169) Uncharacterized protein PSPTO4464
{Pseudomonas syringae pv. tomato [TaxId: 323]}
Length = 148
Score = 30.1 bits (68), Expect = 0.25
Identities = 8/45 (17%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 19 KSKPYEFRRRQLQQLVRL-YEENQQDLANALAADLRKHKQEAVLF 62
K R+R + + +L +++Q+ + L +Q F
Sbjct: 37 KHTANIARKRHILFIGKLMRDQDQEAILVLLDQLDASTRQYNERF 81
>d1qb5d_ b.40.2.1 (D:) Heat-labile toxin {Escherichia coli, type IIB
[TaxId: 562]}
Length = 99
Score = 26.6 bits (58), Expect = 2.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 65 EFLANDVRNTLNHLKQWMTPEKPGKDIANMLDGVYIYPDPYGVCLIIGAWNYP 117
+F ++ T L + + K DI N DG+Y+ GV I A +YP
Sbjct: 4 QFFKDNCNRTTASLVEGVELTKYISDINNNTDGMYVVSSTGGVWRISRAKDYP 56
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 654
Score = 27.8 bits (61), Expect = 3.8
Identities = 8/73 (10%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 137 LKPSEVAPASAKIMAELLPKY-------LDNDTFQVVLGGVEETTELLKHRFDYIFYTGS 189
L ++ + +++ + Y ++ +++ L + + + + + +
Sbjct: 5 LSAQQIEERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQH 64
Query: 190 TSVGKIVRQAANE 202
S K +R A+ E
Sbjct: 65 VSPSKDIRTASTE 77
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 665
Score = 27.4 bits (60), Expect = 5.0
Identities = 13/92 (14%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 137 LKPSEVAPASAKIMAELLPKY-------LDNDTFQVVLGGVEETTELLKHRFDYIFYTGS 189
L P ++ + +++A+ Y L T++ L + + + +
Sbjct: 16 LSPEQIKTRTEQLIAQTKQVYDTVGTIALKEVTYENCLQVLADIEVTYIVERTMLDFPQH 75
Query: 190 TSVGKIVRQAANEHLTPVT---LELGGKSPLY 218
S + VR A+ E ++ +E+ + ++
Sbjct: 76 VSSDREVRAASTEADKKLSRFDIEMSMREDVF 107
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 27.0 bits (59), Expect = 5.3
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 14/96 (14%)
Query: 175 ELLKHRFDYIFYTGSTSVGKIVRQAANEHLTPVTLELGGKSPLYIDSSVNIELAVRRFLW 234
+L++ + +Y+ + I R+ N++ E + S++ A +W
Sbjct: 394 DLIQTKVNYVVQEAIVVIRDIFRKYPNKY------ESIIATLCENLDSLDEPDARAAMIW 447
Query: 235 GKCINAGQTCIAPDYI--------LCSRQVQAQILN 262
A + A + + S QVQ +L
Sbjct: 448 IVGEYAERIDNADELLESFLEGFHDESTQVQLTLLT 483
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.414
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,811,800
Number of extensions: 83596
Number of successful extensions: 232
Number of sequences better than 10.0: 1
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 39
Length of query: 484
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 395
Effective length of database: 1,185,626
Effective search space: 468322270
Effective search space used: 468322270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)