Query psy15677
Match_columns 96
No_of_seqs 173 out of 1089
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 18:43:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fu0_A Cyclophilin, putative; 100.0 1.5E-36 5.2E-41 203.0 9.8 87 1-95 52-139 (160)
2 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.8E-36 9.6E-41 202.7 10.2 87 1-95 58-145 (166)
3 2ok3_A Peptidyl-prolyl CIS-tra 100.0 4.2E-36 1.4E-40 201.0 10.2 87 1-95 47-134 (161)
4 2a2n_A Peptidylprolyl isomeras 100.0 5.1E-36 1.8E-40 203.1 10.2 87 1-95 68-155 (176)
5 2igv_A Peptidyl-prolyl CIS-tra 100.0 8.4E-36 2.9E-40 201.5 10.2 86 1-95 65-152 (173)
6 1qng_A Peptidyl-prolyl CIS-tra 100.0 9.7E-36 3.3E-40 200.7 10.2 86 1-95 64-151 (170)
7 1a58_A Cyclophilin; isomerase, 100.0 1.5E-35 5E-40 200.9 10.2 86 1-95 69-156 (177)
8 2poe_A Cyclophilin-like protei 100.0 1.3E-35 4.4E-40 202.5 9.7 87 1-95 63-154 (185)
9 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.7E-35 5.9E-40 203.5 10.3 87 1-95 66-153 (197)
10 2b71_A Cyclophilin-like protei 100.0 1.2E-35 4.1E-40 204.2 9.4 87 1-95 85-172 (196)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.9E-35 6.3E-40 200.5 10.3 86 1-95 70-157 (177)
12 2wfi_A Peptidyl-prolyl CIS-tra 100.0 1.8E-35 6.1E-40 200.8 10.2 86 1-95 72-159 (179)
13 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.1E-35 7.2E-40 201.6 10.3 86 1-95 81-168 (186)
14 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.9E-35 1E-39 197.5 10.3 86 1-95 58-145 (165)
15 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.4E-35 8.2E-40 199.2 9.9 86 1-95 65-152 (172)
16 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.1E-35 1.1E-39 198.7 10.2 86 1-95 66-153 (173)
17 2he9_A NK-tumor recognition pr 100.0 3.1E-35 1.1E-39 201.6 10.2 86 1-95 82-169 (192)
18 2k7n_A Peptidyl-prolyl CIS-tra 100.0 6.8E-35 2.3E-39 201.3 11.0 87 1-95 58-145 (203)
19 3ich_A Peptidyl-prolyl CIS-tra 100.0 6.7E-35 2.3E-39 199.3 10.2 86 1-95 70-157 (188)
20 2haq_A Cyclophilin; rotamase, 100.0 9.1E-35 3.1E-39 196.3 10.2 85 1-95 66-152 (172)
21 3bo7_A Peptidyl-prolyl CIS-tra 100.0 9.6E-35 3.3E-39 200.3 10.1 94 1-95 53-152 (201)
22 3pmp_A Cyclophilin A; peptidyl 100.0 2.8E-34 9.6E-39 192.5 10.3 86 1-95 57-144 (164)
23 4fru_A Cyclophilin B, peptidyl 100.0 3.5E-34 1.2E-38 195.3 10.2 86 1-95 67-154 (185)
24 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.9E-34 9.9E-39 196.6 8.9 84 1-95 85-171 (191)
25 3rdd_A Peptidyl-prolyl CIS-tra 100.0 7.7E-34 2.6E-38 193.5 10.2 86 1-95 77-164 (184)
26 1z81_A Cyclophilin; structural 100.0 6.4E-34 2.2E-38 199.4 8.9 86 1-95 119-208 (229)
27 2c3b_A Ppiase, cyclophilin; is 100.0 1.1E-34 3.9E-39 195.8 3.9 86 1-95 62-151 (172)
28 3k2c_A Peptidyl-prolyl CIS-tra 100.0 2.9E-33 9.8E-38 191.9 10.3 86 1-95 82-169 (193)
29 1ihg_A Cyclophilin 40; ppiase 100.0 5.6E-33 1.9E-37 203.5 10.1 86 1-95 78-165 (370)
30 2ose_A Probable peptidyl-proly 100.0 1.5E-32 5.1E-37 193.0 9.1 90 1-95 86-186 (234)
31 2hq6_A Serologically defined c 100.0 3.1E-32 1.1E-36 185.8 7.8 85 1-94 71-158 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 9.7E-32 3.3E-36 188.7 8.7 86 1-95 68-172 (232)
33 1lop_A Cyclophilin A; rotamase 100.0 1.4E-31 5E-36 179.3 8.3 84 1-95 46-139 (164)
34 1v9t_A Cyclophilin B; beta bar 100.0 5.1E-31 1.8E-35 177.0 8.9 84 1-95 51-141 (166)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.2E-30 4.1E-35 175.2 7.4 84 1-95 50-143 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 4.4E-30 1.5E-34 189.8 -0.1 87 1-94 224-344 (369)
37 2k9u_B Filamin-binding LIM pro 78.2 2 6.8E-05 19.6 2.2 19 50-68 1-19 (26)
38 3kop_A Uncharacterized protein 40.4 24 0.00083 23.5 3.0 61 32-94 83-167 (188)
39 1x7f_A Outer surface protein; 38.9 36 0.0012 25.1 4.0 49 43-92 326-375 (385)
40 2p0o_A Hypothetical protein DU 34.9 36 0.0012 25.0 3.5 49 43-92 300-349 (372)
41 1zx8_A Hypothetical protein TM 29.9 10 0.00035 24.0 -0.2 43 44-92 74-123 (136)
No 1
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-36 Score=202.97 Aligned_cols=87 Identities=46% Similarity=0.809 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ +.|++|+.+.++|+++|+||||+++|++++|||||++.+ .|+|| +|+||
T Consensus 52 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~-~~~Ldg~~tvF 123 (160)
T 2fu0_A 52 KHFMVQTGDPSGDGTGGESIWG-------NEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVP-CPWLDFKHTVF 123 (160)
T ss_dssp TTTEEEECCTTSSSSCCCCTTS-------SCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEEeCCcCCCCCCCCcccC-------CCccccccCCcccCCceEEEEecCCCCCcccEEEEECCC-CCccCCCcEEE
Confidence 7899999999999999999998 578999877899999999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 124 G~Vv~G~dvv~~I~~~ 139 (160)
T 2fu0_A 124 GKVTQGSKIVLDIEKV 139 (160)
T ss_dssp EEEEECHHHHHHHHTS
T ss_pred EEEEcCHHHHHHHHhC
Confidence 9999999999999875
No 2
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.8e-36 Score=202.71 Aligned_cols=87 Identities=36% Similarity=0.801 Sum_probs=82.3
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ ..|++|+.+.++|.++|+|||||++|++++|||||++.+ .|+|| +|+||
T Consensus 58 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~-~~~Ldg~~tvF 129 (166)
T 2x7k_A 58 KDFMIQGGDPTGTGRGGASIYG-------KQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAP-TQWLDGKHTIF 129 (166)
T ss_dssp TTTEEEECCTTSSSSCCCCTTS-------SCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEEcCCCCCCCCCCCccCC-------CccccccccccCCCCCeEEEEeeCCCCCccceEEEECCC-CCccCCCeeEE
Confidence 7899999999999999999998 579999877999998999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 130 G~Vv~G~dvv~~I~~~ 145 (166)
T 2x7k_A 130 GRVCQGIGMVNRVGMV 145 (166)
T ss_dssp EEEEECHHHHHHHTTS
T ss_pred EEEEcCHHHHHHHHcC
Confidence 9999999999999875
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=4.2e-36 Score=200.98 Aligned_cols=87 Identities=41% Similarity=0.741 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ ..|++|+.+.++|+++|+||||+++|++++|||||++.+ .|+|| +|+||
T Consensus 47 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~-~~~Ldg~~tvF 118 (161)
T 2ok3_A 47 KGFMVQTGDPTGTGRGGNSIWG-------KKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGK-QPHLDMKYTVF 118 (161)
T ss_dssp TTTEEEECCTTSSSSCCCCTTS-------SCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEecCCCCCCCCCCCcccC-------CccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCC-CCccCCCEeEE
Confidence 7899999999999999999999 578999877899999999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 119 G~Vv~G~dvv~~I~~~ 134 (161)
T 2ok3_A 119 GKVIDGLETLDELEKL 134 (161)
T ss_dssp EEEEECHHHHHHHHTC
T ss_pred EEEeCCHHHHHHHHhC
Confidence 9999999999999875
No 4
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=5.1e-36 Score=203.08 Aligned_cols=87 Identities=40% Similarity=0.780 Sum_probs=82.3
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ +.|++|+.+.++|+++|+||||+++|++++|||||++.+ .|+|| +|+||
T Consensus 68 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~-~~~LDg~~tVF 139 (176)
T 2a2n_A 68 KGFMIQTGDPTGTGMGGESIWG-------GEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVP-TPWLDNKHTVF 139 (176)
T ss_dssp TTTEEEECCTTSSSSCCCCTTS-------SCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCcEEEccCCCCCCCCCCcccC-------CccccccccccccCCceEEEEEeCCCCCcccEEEEECCC-CCccCCCeeEE
Confidence 7899999999999999999998 579999887899999999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 140 G~Vv~Gmdvv~~I~~~ 155 (176)
T 2a2n_A 140 GRVTKGMEVVQRISNV 155 (176)
T ss_dssp EEEEECHHHHHHHHTS
T ss_pred EEEeCCHHHHHHHHcC
Confidence 9999999999999875
No 5
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=8.4e-36 Score=201.51 Aligned_cols=86 Identities=40% Similarity=0.709 Sum_probs=80.4
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|+++|+|||||++|++++|||||++.+ .|||| +|+|
T Consensus 65 ~~f~iQgGd~~~~~G~gg~siyg-------~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~-~~~LDg~~~v 135 (173)
T 2igv_A 65 PNFMIQGGDFTRGNGTGGESIYG-------EKFPDENF-KEKHTGPGVLSMANAGPNTNGSQFFLCTVK-TEWLDGKHVV 135 (173)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBSSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCCCCCCCCCCCCccCC-------CcccCccc-ccCCCCCeEEEEeeCCCCCcceEEEEEcCC-ccccCCCeeE
Confidence 78999999997 89999999998 56899975 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 136 FG~Vv~G~dvv~~I~~~ 152 (173)
T 2igv_A 136 FGRVVEGLDVVKAVESN 152 (173)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEecCHHHHHHHHhC
Confidence 99999999999999864
No 6
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=9.7e-36 Score=200.72 Aligned_cols=86 Identities=41% Similarity=0.782 Sum_probs=80.5
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|+++|+|||||++|++++|||||++.+ .|||| +|+|
T Consensus 64 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~-~~~Ldg~~~v 134 (170)
T 1qng_A 64 PQFMCQGGDITNGNGSGGESIYG-------RSFTDENF-NMKHDQPGLLSMANAGPNTNSSQFFITLVP-CPWLDGKHVV 134 (170)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCCccCCCCCCCccccC-------Cccccccc-ccccCCCCEEEEeecCCCCcccEEEEECCC-CcccCCCeeE
Confidence 78999999997 89999999998 56899974 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 135 FG~Vv~G~dvv~~I~~~ 151 (170)
T 1qng_A 135 FGKVIEGMNVVREMEKE 151 (170)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEECCHHHHHHHHhC
Confidence 99999999999999975
No 7
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.5e-35 Score=200.93 Aligned_cols=86 Identities=42% Similarity=0.695 Sum_probs=80.6
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|+++|+|||||++|++++|||||++.+ .|||| +|+|
T Consensus 69 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~~-~~~h~~~G~lsmAn~gp~tngSQFfIt~~~-~~~LDg~~~V 139 (177)
T 1a58_A 69 KNFMIQGGDFTKGDGTGGESIYG-------GMFDDEEF-VMKHDEPFVVSMANKGPNTNGSQFFITTTP-APHLNNIHVV 139 (177)
T ss_dssp TTTEEEECCCSSSSSSCCCCTTS-------SCBCCCCC-CSCCCSSSEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEeCCccCCCCCCCCcccC-------CcccCccc-CcccCCCeEEEEeeCCCCCceeEEEEECCC-CCccCCCEEE
Confidence 78999999997 89999999998 56899975 889999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 140 FG~Vv~G~dvv~~I~~~ 156 (177)
T 1a58_A 140 FGKVVSGQEVVTKIEYL 156 (177)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEEcCHHHHHHHHhC
Confidence 99999999999999975
No 8
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.3e-35 Score=202.48 Aligned_cols=87 Identities=45% Similarity=0.844 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecC----CCCccceEEEEeCCCCCCCC-C
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCG----EGLLGSQFFITLGPDLKSLN-E 75 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~----~~~~~sqFfI~~~~~~~~ld-~ 75 (96)
|+|||||||++++|+|+.++|+ ..|++|+.+.++|+++|+||||+++ |++++|||||++.+ .|+|| +
T Consensus 63 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~-~~~LDg~ 134 (185)
T 2poe_A 63 KGFIIQGGDPTGTGKGGESIYG-------RYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSS-LPQLNGE 134 (185)
T ss_dssp TTSEEEEEETTSSSSCCCBTTB-------SCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSC-CGGGTTT
T ss_pred CCCEEEcCCCCCCCCCCCccCC-------CcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCC-CCccCCC
Confidence 7899999999999999999998 5789998779999989999999999 99999999999996 89999 9
Q ss_pred ceEEEEEEcCHHHHHHHHhh
Q psy15677 76 HCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 76 ~~vFG~Vi~G~dvl~~I~~~ 95 (96)
|+|||||++|||||++|+++
T Consensus 135 ~tVFG~Vv~Gmdvv~~I~~~ 154 (185)
T 2poe_A 135 YVIFGKLIDGFETLNTLENC 154 (185)
T ss_dssp SCEEEEEEECHHHHHHHHHS
T ss_pred eeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999975
No 9
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-35 Score=203.47 Aligned_cols=87 Identities=41% Similarity=0.796 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ ..|++|..+.++|+++|+|||||++|++++|||||++.+ .++|| +|+||
T Consensus 66 ~~f~iQgGd~~~~g~Gg~si~g-------~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~-~~~LDg~~tVF 137 (197)
T 1zkc_A 66 RNFVIQGGDPTGTGTGGESYWG-------KPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRS-CAYLDKKHTIF 137 (197)
T ss_dssp TTTEEEECCTTSSSSCCCBTTB-------SCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEEcCCCCCCCCCCCccCC-------CccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCC-CCccCCCccEE
Confidence 7899999999999999999998 579999777999999999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|+|++|||||++|+++
T Consensus 138 G~Vv~Gmdvv~~I~~~ 153 (197)
T 1zkc_A 138 GRVVGGFDVLTAMENV 153 (197)
T ss_dssp EEEEECHHHHHHHHHS
T ss_pred EEEEcCHHHHHHHHcC
Confidence 9999999999999975
No 10
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-35 Score=204.15 Aligned_cols=87 Identities=38% Similarity=0.780 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ ..|++|..+.++|+++|+||||+++|++++|||||++.+ .|+|| +|+||
T Consensus 85 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~-~~~LDg~~tVF 156 (196)
T 2b71_A 85 PNFVIQGGDPTGTGKGGKSIYG-------EYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAP-LPHLDGKHTIF 156 (196)
T ss_dssp TTTEEEEEETTSSSSCCCBTTB-------SCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSC-CGGGTTTSCEE
T ss_pred CCcEEEcCCCCCCCCCCCccCC-------CcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCC-CCccCCCEeEE
Confidence 7899999999999999999998 578999877899998999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 157 G~Vv~Gmdvv~~I~~~ 172 (196)
T 2b71_A 157 ARVSKNMTCIENIASV 172 (196)
T ss_dssp EEEEECHHHHHHHHTS
T ss_pred EEEecCHHHHHHHHhC
Confidence 9999999999999875
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.9e-35 Score=200.46 Aligned_cols=86 Identities=40% Similarity=0.667 Sum_probs=80.5
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|+++|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 70 ~~f~iQgGd~~~~~G~gg~si~g-------~~f~dE~~-~l~h~~~G~lsmAn~gp~tngSQFfIt~~~-~~~LDg~~~V 140 (177)
T 1mzw_A 70 KDFMIQGGDFVNGDGTGVASIYR-------GPFADENF-KLRHSAPGLLSMANSGPSTNGCQFFITCSK-CDWLDGKHVV 140 (177)
T ss_dssp TTTEEEECCTTTSSSCCCCCTTS-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCCcccCCCCCCCccCC-------CcccCccc-ccccCCCCEEEEccCCCCCcceEEEEECCC-CCccCCCeeE
Confidence 78999999997 89999999998 56899974 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 141 FG~Vv~G~dvv~~I~~~ 157 (177)
T 1mzw_A 141 FGKIIDGLLVMRKIENV 157 (177)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999975
No 12
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=1.8e-35 Score=200.83 Aligned_cols=86 Identities=38% Similarity=0.723 Sum_probs=80.6
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|+++|+|||||++|++++|||||++.+ .|||| +|+|
T Consensus 72 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~~-~~~h~~~G~lsMAn~gp~tngSQFfIt~~~-~~~LDg~~tV 142 (179)
T 2wfi_A 72 KDFMVQGGDFSEGNGRGGESIYG-------GFFEDESF-AVKHNKEFLLSMANRGKDTNGSQFFITTKP-TPHLDGHHVV 142 (179)
T ss_dssp TTTEEEECCTTTSSSSCCCCTTS-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcccccCCCCCCCCcccC-------Cccccccc-CcCcCCCeEEEEEeCCCCCcceEEEEEcCC-CcccCCCeeE
Confidence 78999999997 89999999998 56899975 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 143 FG~Vv~G~dvv~~I~~~ 159 (179)
T 2wfi_A 143 FGQVISGQEVVREIENQ 159 (179)
T ss_dssp EEEEEECHHHHHHHHTC
T ss_pred EEEEeCCHHHHHHHHcC
Confidence 99999999999999875
No 13
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.1e-35 Score=201.56 Aligned_cols=86 Identities=40% Similarity=0.686 Sum_probs=80.0
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|.++|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 81 ~~f~iQgGd~~~~~G~gg~si~g-------~~f~dE~~-~l~h~~~G~lsMAn~gpntngSQFFIt~~~-~~~LDg~~tV 151 (186)
T 2poy_A 81 PQFMIQGGDFTRGDGTGGESIYG-------SKFRDENF-VYTHDAPFLLSMANAGPNTNGSQFFITTVP-CPWLDGKHVV 151 (186)
T ss_dssp TTTEEEECCTTTSSSSCCCCTTC--------CBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEeCCCCCCCCCCCCccCC-------CcccCccc-ccccCCCcEEEEeeCCCCCcccEEEEECCC-CcccCCCeeE
Confidence 78999999997 89999999998 56899974 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 152 FG~Vv~Gmdvv~~I~~~ 168 (186)
T 2poy_A 152 FGKVLEGMEVVKSIEKC 168 (186)
T ss_dssp EEEEEECHHHHHHHHHT
T ss_pred EEEEecCHHHHHHHHhC
Confidence 99999999999999874
No 14
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.9e-35 Score=197.55 Aligned_cols=86 Identities=38% Similarity=0.674 Sum_probs=80.1
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+ +.++|.++|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 58 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~-~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~-~~~Ldg~~~v 128 (165)
T 2z6w_A 58 PSFMCQAGDFTNHNGTGGKSIYG-------SRFPDEN-FTLKHVGPGVLSMANAGPNTNGSQFFICTIK-TDWLDGKHVV 128 (165)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEeCCccCCCCCCCCcccC-------CcccCcc-cccccCCCCEEEEeeCCCCCcccEEEEEcCC-CcccCCCeeE
Confidence 78999999997 78999999998 5689996 5899998999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 129 FG~Vv~G~dvv~~I~~~ 145 (165)
T 2z6w_A 129 FGHVIEGMDVVKKIESF 145 (165)
T ss_dssp EEEEEECHHHHHHHHHT
T ss_pred EEEEEcCHHHHHHHHhC
Confidence 99999999999999874
No 15
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.4e-35 Score=199.16 Aligned_cols=86 Identities=36% Similarity=0.679 Sum_probs=80.3
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|.++|+||||+++|++++|||||++.+ .|+|| +|+|
T Consensus 65 ~~f~iQgGd~~~~~G~gg~si~g-------~~f~dE~~-~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~-~~~LDg~~tv 135 (172)
T 2cmt_A 65 PQFMCQGGDFVKGDGTGGKSIYG-------RKFDDENF-QLRHEGFGVLSMANSGPNTNGSQFFICTTK-CDWLDGKHVV 135 (172)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCCccCCCCCCCCccCC-------Cccccccc-CcccCCceEEEEeeCCCCCcccEEEEECCC-CCccCCCeeE
Confidence 78999999997 88999999998 56899975 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 136 FG~Vv~G~dvv~~I~~~ 152 (172)
T 2cmt_A 136 FGRVVDGQNVVKKMESV 152 (172)
T ss_dssp EEEEEECHHHHHHGGGG
T ss_pred EEEEEcCHHHHHHHHhC
Confidence 99999999999999874
No 16
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.1e-35 Score=198.74 Aligned_cols=86 Identities=41% Similarity=0.750 Sum_probs=80.2
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|+++|+|||||++|++++|||||++.+ .++|| +|+|
T Consensus 66 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~~-~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~-~~~LDg~~tV 136 (173)
T 2r99_A 66 PQFMCQGGDFTNHNGTGGKSIYG-------KKFDDENF-ILKHTGPGLLSMANSGPNTNGSQFFLTCDK-TDWLDGKHVV 136 (173)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSSSEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEeCCcCCCCCCCCCccCC-------CcccCccc-CcccCCCcEEEEccCCCCCcccEEEEECCC-CCccCCCeeE
Confidence 78999999998 78999999998 56899974 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 137 FG~Vv~G~dvv~~I~~~ 153 (173)
T 2r99_A 137 FGEVTEGLDVLRQIEAQ 153 (173)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEEcCHHHHHHHHhC
Confidence 99999999999999864
No 17
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=201.56 Aligned_cols=86 Identities=40% Similarity=0.720 Sum_probs=80.6
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|+++|+|||||++|++|+||||||+.+ .|+|| +|+|
T Consensus 82 ~~fmiQgGd~~~~~G~gg~siyg-------~~f~dE~~-~l~h~~~G~lsMAn~gp~tngSQFFIt~~~-~~~LDg~~tV 152 (192)
T 2he9_A 82 KNFMIQGGDFSEGNGKGGESIYG-------GYFKDENF-ILKHDRAFLLSMANRGKHTNGSQFFITTKP-APHLDGVHVV 152 (192)
T ss_dssp TTTEEEECCTTTSSSSCCCCTTS-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCcccCCCCCCCCcccC-------CcccCccc-cCCCCCCeEEEEEeCCCCCcceEEEEEcCC-CcccCCCccE
Confidence 78999999997 89999999998 57899975 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 153 FG~Vv~Gmdvv~~I~~~ 169 (192)
T 2he9_A 153 FGLVISGFEVIEQIENL 169 (192)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEEeCHHHHHHHHcC
Confidence 99999999999999975
No 18
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=6.8e-35 Score=201.26 Aligned_cols=87 Identities=36% Similarity=0.801 Sum_probs=82.2
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+++.++|+ ..|++|+.+.++|.++|+|||||++|++++|||||++.+ .++|| +|+||
T Consensus 58 ~~F~iQgGd~~~~g~gg~si~g-------~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~-~~~LDg~~tVF 129 (203)
T 2k7n_A 58 KDFMIQGGDPTGTGRGGASIYG-------KQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAP-TQWLDGKHTIF 129 (203)
T ss_dssp TTTEEEEECSSSSSSCCCTTSC-------SCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSC-CCSSTTTSCEE
T ss_pred CCcEEEcCCCCCCCCCCCccCC-------CcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCC-CCccCCCeeEE
Confidence 7899999999999999999998 579999877999998999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHHHHHHhh
Q psy15677 80 GEIAEGFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~G~dvl~~I~~~ 95 (96)
|||++|||||++|+++
T Consensus 130 G~VveGmdvv~kI~~~ 145 (203)
T 2k7n_A 130 GRVCQGIGMVNRVGMV 145 (203)
T ss_dssp EEEESCHHHHHHHHSC
T ss_pred EEEEcCHHHHHHHHcC
Confidence 9999999999999875
No 19
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=6.7e-35 Score=199.34 Aligned_cols=86 Identities=41% Similarity=0.724 Sum_probs=79.9
Q ss_pred CCeEEEeCC-CCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGD-PTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD-~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+||||||| +.++|+|+.++|+ +.|++|+ ..++|+++|+|||||++|++++|||||++.+ .+||| +|+|
T Consensus 70 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~-~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~-~~~LDg~~tV 140 (188)
T 3ich_A 70 KDFMIQGGDFTRGDGTGGKSIYG-------ERFPDEN-FKLKHYGPGWVSMANAGKDTNGSQFFITTVK-TAWLDGKHVV 140 (188)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEcCCccCCCCCCCccccC-------Ccccccc-cCcccCCCeEEEEccCCCCCcccEEEEECCC-CcccCCCeeE
Confidence 689999999 5699999999998 5789995 5899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 141 FG~Vv~G~dvv~~I~~~ 157 (188)
T 3ich_A 141 FGKVLEGMEVVRKVEST 157 (188)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999875
No 20
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=9.1e-35 Score=196.34 Aligned_cols=85 Identities=39% Similarity=0.702 Sum_probs=79.0
Q ss_pred CCeEEEeCCC-CCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDP-TGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~-~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||+ .++|+|+.++|+ +.|++|+ +.++|. +|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 66 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~-~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~-~~~LDg~~~v 135 (172)
T 2haq_A 66 QNFMIQGGDFTNFDGTGGKSIYG-------EKFADEN-LNVKHF-VGALSMANAGPNTNGSQFFITTAP-TPWLDGRHVV 135 (172)
T ss_dssp TTTEEEECCTTTSSSSCCCCSSS-------SCBCCCC-CCSCCC-TTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEecCCccCCCCCCCccccC-------CcccCcC-CCcccC-ceEEEEccCCCCCcccEEEEECCC-CCccCCCEeE
Confidence 7899999994 589999999999 5689995 589999 999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 136 FG~Vv~G~dvv~~I~~~ 152 (172)
T 2haq_A 136 FGKVLDGMDVVLRIEKT 152 (172)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999875
No 21
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=9.6e-35 Score=200.28 Aligned_cols=94 Identities=28% Similarity=0.410 Sum_probs=77.6
Q ss_pred CCeEEEeC-----CCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-
Q psy15677 1 ANFIAQTG-----DPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN- 74 (96)
Q Consensus 1 ~~f~iQgG-----D~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld- 74 (96)
|+|||||| ||+++|+|+.++|+.........|++|..+.++|+++|+||||+++|++++|||||++.+ .++||
T Consensus 53 ~~f~iQgG~~~~~Dp~~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~-~~~LDg 131 (201)
T 3bo7_A 53 RNFMIQGGRAELRQPSKKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKS-CEHLNN 131 (201)
T ss_dssp TTTEEEECCGGGCCC-------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSC-CGGGTT
T ss_pred CCCEEEcCcccccCCCCCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCC-CcccCC
Confidence 78999999 999999999999943333333679999777999999999999999999999999999996 89999
Q ss_pred CceEEEEEEcCHHHHHHHHhh
Q psy15677 75 EHCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 75 ~~~vFG~Vi~G~dvl~~I~~~ 95 (96)
+|+|||+|++|||||++|+++
T Consensus 132 ~~tVFG~Vv~Gmdvv~~I~~~ 152 (201)
T 3bo7_A 132 KHTIFGRVVGGLDVLRQWEKL 152 (201)
T ss_dssp TSCEEEEEEECHHHHHHHTTC
T ss_pred CceEEEEEecCHHHHHHHHhC
Confidence 999999999999999999875
No 22
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=2.8e-34 Score=192.54 Aligned_cols=86 Identities=44% Similarity=0.776 Sum_probs=79.7
Q ss_pred CCeEEEeCC-CCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGD-PTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD-~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+||||||| +.++|+|+.++|+ +.|++|+ +.++|.++|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 57 ~~f~iQgGd~~~~~g~gg~si~g-------~~~~dE~-~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~-~~~Ld~~~~v 127 (164)
T 3pmp_A 57 PQFMLQGGDFTRHNGTGGKSIYG-------EKFADEN-FQVKHTKPGLLSMANAGANTNGSQFFITTVP-TSWLDGKHVV 127 (164)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCC-CCSCCCSTTEEEECBSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCeEEeCCCCCCCCCCCcccCC-------ccccccc-cccCcCCCcEEEEeeCCCCCcccEEEEECCC-ChhhCCCccE
Confidence 789999999 4589999999999 5688996 4899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 128 FG~Vv~G~~vv~~I~~~ 144 (164)
T 3pmp_A 128 FGEVIEGLDIVRKVEGK 144 (164)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999874
No 23
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.5e-34 Score=195.30 Aligned_cols=86 Identities=42% Similarity=0.722 Sum_probs=80.5
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|.++|+|||||++|++++|||||++.+ .++|| +|+|
T Consensus 67 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~de~~-~~~h~~~G~lsma~~gp~t~~SQFfI~~~~-~~~Ld~~~~v 137 (185)
T 4fru_A 67 KDFMIQGGDFTRGDGTGGKSIYG-------ERFPDENF-KLKHYGPGWVSMANAGKDTNGSQFFITTVK-TAWLDGKHVV 137 (185)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCeEEECCCCCCCCCCCccccC-------CccCcccc-ccCcCCCeEEEEeeCCCCCcceEEEEEeCC-CcccCCCccE
Confidence 78999999998 89999999999 56889975 899999999999999999999999999996 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 138 FG~Vv~G~dvv~~I~~~ 154 (185)
T 4fru_A 138 FGKVLEGMEVVRKVETT 154 (185)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999874
No 24
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-34 Score=196.61 Aligned_cols=84 Identities=39% Similarity=0.736 Sum_probs=77.6
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+ |+ +.|++|+.+.++|+++|+|||||++|++|+||||||+.+ .|+|| +|+||
T Consensus 85 ~~fmiQgGd~~g~G~gg---~g-------~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~-~~~LDg~~tVF 153 (191)
T 1w74_A 85 QGFMIQGGDPTGTGRGG---PG-------YKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGK-TPHLNRRHTIF 153 (191)
T ss_dssp TTTEEEECCTTSSSSCC---SS-------CCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEecCCCCCCCCCC---CC-------CccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCC-CcccCCCeeEE
Confidence 78999999999888887 44 568999777999999999999999999999999999996 89999 99999
Q ss_pred EEEEc--CHHHHHHHHhh
Q psy15677 80 GEIAE--GFDILLKLNNA 95 (96)
Q Consensus 80 G~Vi~--G~dvl~~I~~~ 95 (96)
|||++ |||||++|+++
T Consensus 154 G~Vv~~~Gmdvv~~I~~~ 171 (191)
T 1w74_A 154 GEVIDAESQRVVEAISKT 171 (191)
T ss_dssp EEECSHHHHHHHHHHHTS
T ss_pred EEEEECCCHHHHHHHHcC
Confidence 99999 99999999975
No 25
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=7.7e-34 Score=193.51 Aligned_cols=86 Identities=38% Similarity=0.694 Sum_probs=79.6
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ ..|++|+. .++|+++|+||||+++|++++|||||++.+ .++|| +|+|
T Consensus 77 ~~f~iQgGd~~~~~g~gg~si~g-------~~~~de~~-~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~-~~~LDg~~tV 147 (184)
T 3rdd_A 77 PGFMCQGGDFTRHNGTGGKSIYG-------EKFEDENF-ILKHTGPGILSMANAGPNTNGSQFFICTAK-TEWLDGKHVV 147 (184)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CSCCCSTTEEEECCSSTTCBSSCEEEESSC-CGGGTTTSCE
T ss_pred CCcEEEeCCCCCCCCCCCcccCC-------CcccCccc-ccccCCCcEEEEEeCCCCCcccEEEEEeCC-chhhCCCceE
Confidence 78999999965 88999999999 56888875 899999999999999999999999999996 79999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 148 FG~Vv~G~dvv~~I~~~ 164 (184)
T 3rdd_A 148 FGKVKEGMNIVEAMERF 164 (184)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEecCHHHHHHHHhc
Confidence 99999999999999874
No 26
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=6.4e-34 Score=199.38 Aligned_cols=86 Identities=36% Similarity=0.605 Sum_probs=80.5
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||++ ++|+|+.++|+ +.|++|+. .++|+++|+|||||++|++++||||||+.+ .++|| +|+|
T Consensus 119 ~~FmiQgGD~~~g~G~Gg~siyg-------~~f~dE~~-~l~h~~~G~LsMAn~gpntngSQFFIt~~~-~~~LDg~~tV 189 (229)
T 1z81_A 119 KEFMIQGGDFINHNGSGSLSIYG-------EKFDDENF-DIKHDKEGLLSMANSGPNTNGCQFFITTKK-CEWLDGKNVV 189 (229)
T ss_dssp TTTEEEECCTTTSSSCCCCBTTB-------SCCCCCCC-CSCCCSTTEEEECCSSSSCCCSCEEEESSC-CGGGBTTBCE
T ss_pred CCCEEEcCCCcCCCCCCCCccCC-------Cccccccc-ccccCCCcEEEeccCCCCCcccEEEEECCC-CcccCCCeeE
Confidence 78999999996 89999999998 56899974 899999999999999999999999999996 89999 9999
Q ss_pred EEEEE--cCHHHHHHHHhh
Q psy15677 79 FGEIA--EGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi--~G~dvl~~I~~~ 95 (96)
||||+ +|||||++|+++
T Consensus 190 FG~Vv~~eGmdVv~~I~~~ 208 (229)
T 1z81_A 190 FGRIIDNDSLLLLKKIENV 208 (229)
T ss_dssp EEEECSHHHHHHHHHHHHS
T ss_pred EEEEEecCcHHHHHHHHhC
Confidence 99999 999999999975
No 27
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-34 Score=195.81 Aligned_cols=86 Identities=38% Similarity=0.694 Sum_probs=53.2
Q ss_pred CCeEEEeCC-CCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGD-PTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD-~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+||||||| +.++|+|+.++|+ +.|++|+ +.++|+++|+|||||++|++++|||||++.+ .|+|| +|+|
T Consensus 62 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~-~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~-~~~LDg~~tv 132 (172)
T 2c3b_A 62 PNFMIQGGDFTRGNGTGGRSIYG-------DKFADEN-FSRKHDKKGILSMANAGPNTNGSQFFITTAV-TSWLDGKHVV 132 (172)
T ss_dssp TTTEEEECC------------------------------CHHHHHTCEEEEC---------CEEEECSC-CTTCCSCCEE
T ss_pred CCCEEEeCCcCCCCCCCCcccCC-------CcccCcc-cccccCCCeEEEEeeCCCCCcccEEEEECCC-CCccCCCeeE
Confidence 789999999 6799999999998 5689995 4888999999999999999999999999996 89999 9999
Q ss_pred EEEEEc--CHHHHHHHHhh
Q psy15677 79 FGEIAE--GFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~--G~dvl~~I~~~ 95 (96)
||||++ |||||++|+++
T Consensus 133 FG~Vv~~~G~dvv~~I~~~ 151 (172)
T 2c3b_A 133 FGEVADEKSYSVVKEIEAL 151 (172)
T ss_dssp EEEECSHHHHHHHHHHHTT
T ss_pred EEEEEecCCHHHHHHHHhC
Confidence 999999 99999999975
No 28
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=2.9e-33 Score=191.92 Aligned_cols=86 Identities=44% Similarity=0.798 Sum_probs=79.4
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|+|||||||+. ++|+|+.++|+ ..|++|+ ..++|+++|+||||+++|++++|||||++.+ .++|| +|+|
T Consensus 82 ~~f~iQgGd~~~~~g~gg~si~g-------~~f~dE~-~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~-~~~LDg~~tV 152 (193)
T 3k2c_A 82 PGFMVQGGDYTAHNGTGGRSIYG-------EKFPDEN-FELKHTKEGILSMANCGAHTNGSQFFITLGK-TQWLDEKHVV 152 (193)
T ss_dssp TTTEEEECCTTTSSSSCCCCTTS-------SCBCCCC-CCSCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCCEEEeCCCCCCCCcCCcccCC-------Ccccccc-cccccCCCcEEEEEeCCCCCCccEEEEECCC-CcccCCCccE
Confidence 78999999955 88999999999 5688886 4899999999999999999999999999997 79999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||||++|||||++|+++
T Consensus 153 FG~Vv~Gmdvv~~I~~~ 169 (193)
T 3k2c_A 153 FGEVVEGMDVVHKIAKY 169 (193)
T ss_dssp EEEEEECHHHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhc
Confidence 99999999999999874
No 29
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.6e-33 Score=203.49 Aligned_cols=86 Identities=41% Similarity=0.696 Sum_probs=81.0
Q ss_pred CCeEEEeCCCC-CCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceE
Q psy15677 1 ANFIAQTGDPT-GVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCV 78 (96)
Q Consensus 1 ~~f~iQgGD~~-~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~v 78 (96)
|||||||||++ ++|+|+.++|| ..|++|+. .++|+++|+|||||++|++++||||||+.+ .|||| +|+|
T Consensus 78 ~~f~~q~Gd~~~~~g~g~~~~~~-------~~~~~e~~-~~~~~~~g~l~ma~~~~~~~~sqffi~~~~-~~~ld~~~~v 148 (370)
T 1ihg_A 78 KKFMIQGGDFSNQNGTGGESIYG-------EKFEDENF-HYKHDKEGLLSMANAGSNTNGSQFFITTVP-TPHLDGKHVV 148 (370)
T ss_dssp TTTEEEECCTTTSSSSCCCBTTB-------SCBCCCCC-CBCCCSTTEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCE
T ss_pred CCcEEECCCCCCCCCCCCCCCCC-------CCcCCCcC-CcCCCCCeEEEEeeCCCCCCCceEEEeCCC-CcccCCCceE
Confidence 79999999999 99999999999 57999975 899999999999999999999999999997 89999 9999
Q ss_pred EEEEEcCHHHHHHHHhh
Q psy15677 79 FGEIAEGFDILLKLNNA 95 (96)
Q Consensus 79 FG~Vi~G~dvl~~I~~~ 95 (96)
||+|++||+||++|+++
T Consensus 149 fG~v~~g~~v~~~i~~~ 165 (370)
T 1ihg_A 149 FGQVIKGMGVAKILENV 165 (370)
T ss_dssp EEEEEECHHHHHHHHTS
T ss_pred EEEEecCHHHHHHHHcC
Confidence 99999999999999874
No 30
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.98 E-value=1.5e-32 Score=193.04 Aligned_cols=90 Identities=29% Similarity=0.443 Sum_probs=73.0
Q ss_pred CCeEEEeCCC-CCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEee----cCCCCccceEEEEeCCC-----C
Q psy15677 1 ANFIAQTGDP-TGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVH----CGEGLLGSQFFITLGPD-----L 70 (96)
Q Consensus 1 ~~f~iQgGD~-~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~----~~~~~~~sqFfI~~~~~-----~ 70 (96)
|+|||||||+ +++|+|+.++|+..... ..|+ + +.++|+++|+||||| ++|++++||||||+.+. .
T Consensus 86 ~~FmiQgGd~~~g~G~Gg~siyg~~~~p--~~f~-~--~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~ 160 (234)
T 2ose_A 86 HNNYIVSGDIYNSNGSSAGTVYCDEPIP--PVFG-D--YFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVL 160 (234)
T ss_dssp TTTEEEECCCC----CCCCCTTTTCCBC--CCCC-S--CCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSG
T ss_pred CCCEEEcCCccCCCCCCCccccCCccCc--cccc-C--cCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCC
Confidence 6899999995 69999999999842000 0144 3 378999899999999 89999999999999852 7
Q ss_pred CCCC-CceEEEEEEcCHHHHHHHHhh
Q psy15677 71 KSLN-EHCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 71 ~~ld-~~~vFG~Vi~G~dvl~~I~~~ 95 (96)
+||| +|+|||||++|||||++|+++
T Consensus 161 p~LDg~~tVFG~Vv~GmdVv~~I~~~ 186 (234)
T 2ose_A 161 DELDRDQVVIGQVYGGLDVLDKINSM 186 (234)
T ss_dssp GGSCTTSEEEEEEEECHHHHHHHHHH
T ss_pred cccCCCeeEEEEEeCCHHHHHHHHhC
Confidence 9999 999999999999999999975
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=185.76 Aligned_cols=85 Identities=41% Similarity=0.800 Sum_probs=77.6
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeecCCCCccceEEEEeCCCCCCCC-CceEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGEGLLGSQFFITLGPDLKSLN-EHCVF 79 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld-~~~vF 79 (96)
|+|||||||++++|+|+.++|+ ..|++|+.+.++|+++|+|||||++|++++|||||++.+ .++|| +|+||
T Consensus 71 ~~f~iQgGd~~~~g~gg~si~g-------~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~-~~~LDg~~tVF 142 (185)
T 2hq6_A 71 PGFIVQGGDPTGTGSGGESIYG-------APFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGR-ADELNNKHTIF 142 (185)
T ss_dssp TTTEEEECCTTSSSSCCCCTTS-------SCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSC-CGGGTTTSCEE
T ss_pred CCCEEEcCCCCCCCCCCCcccC-------CccccccccCcccCCCeEEEEccCCCCCccceEEEECCC-CCccCCCceEE
Confidence 7899999999999999999998 578999877899999999999999999999999999996 89999 99999
Q ss_pred EEEEcCHHHH--HHHHh
Q psy15677 80 GEIAEGFDIL--LKLNN 94 (96)
Q Consensus 80 G~Vi~G~dvl--~~I~~ 94 (96)
|||+ |++|+ ++|++
T Consensus 143 G~V~-G~~v~~~~~i~~ 158 (185)
T 2hq6_A 143 GKVT-GDTVYNMLRLSE 158 (185)
T ss_dssp EEEC-GGGHHHHHHTTC
T ss_pred EEEE-eCeeehhhHHhh
Confidence 9999 88775 56664
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=9.7e-32 Score=188.68 Aligned_cols=86 Identities=41% Similarity=0.780 Sum_probs=77.0
Q ss_pred CCeEEEeCCCCCCCCCCCccc--cCccCCCCCcCCCCcCCCCCCCCCceEEEeecCC--------------CCccceEEE
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVF--GLAYGDHARYYEAETQPKIPHSKPGLVSMVHCGE--------------GLLGSQFFI 64 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~--~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~~~--------------~~~~sqFfI 64 (96)
|+|||||||++++|+|+.++| + +.|++|+.+.++|+++|+||||++++ ++++|||||
T Consensus 68 ~~FmiQgGdp~~~G~Gg~si~~~g-------~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFI 140 (232)
T 3bkp_A 68 KDFIVQGGDPTGTGRGGADTTFDG-------KPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFI 140 (232)
T ss_dssp TTTEEEECCTTSSSSCCCCCTTTT-------CCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEE
T ss_pred CCCEEEcCCCCCCCCCCCccccCC-------CccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEE
Confidence 789999999999999999999 6 57999988889999999999999996 699999999
Q ss_pred EeCCCCCCCC-CceEEEEEEcCHHH--HHHHHhh
Q psy15677 65 TLGPDLKSLN-EHCVFGEIAEGFDI--LLKLNNA 95 (96)
Q Consensus 65 ~~~~~~~~ld-~~~vFG~Vi~G~dv--l~~I~~~ 95 (96)
|+.+ .|+|| +|+|||+|+ ||+| |++|+++
T Consensus 141 t~~~-~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~ 172 (232)
T 3bkp_A 141 TLAR-ADVLNNAYTLFGKVT-GHTLYNLMKFNDL 172 (232)
T ss_dssp ESSC-CGGGTTTSCEEEEEC-GGGHHHHHHHTTS
T ss_pred ECCC-CcccCCCccEEEEEE-eCchHHHHHHHcC
Confidence 9996 89999 999999999 6665 8899864
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.97 E-value=1.4e-31 Score=179.34 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=73.0
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeec-CCCCccceEEEEeCCCCCCCC-C---
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHC-GEGLLGSQFFITLGPDLKSLN-E--- 75 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~-~~~~~~sqFfI~~~~~~~~ld-~--- 75 (96)
|+|||||||++.. . +.++|+ ..|++|+.+.++|. +|+||||++ +|++++|||||++.+ .++|| +
T Consensus 46 ~~f~iQgGd~~~~-~-g~~~~g-------~~~~dE~~~~l~~~-~G~lsmA~~~~p~s~gSQFfI~~~~-~~~Ld~~~~~ 114 (164)
T 1lop_A 46 NGFMIQGGGFEPG-M-KQKATK-------EPIKNEANNGLKNT-RGTLAMARTQAPHSATAQFFINVVD-NDFLNFSGES 114 (164)
T ss_dssp TTTEEEESSEETT-T-EECCCC-------CCBCCCCCSSCCCC-TTEEEECCCSSTTCBCSCEEEESSC-CGGGSCCSSS
T ss_pred CCceEecCCcccC-C-CcCCCC-------CccccccccccccC-ccEEEEeecCCCCCccceEEEEcCC-ccccCCcccc
Confidence 7899999999731 1 446676 57999987778886 999999975 699999999999996 79999 8
Q ss_pred -----ceEEEEEEcCHHHHHHHHhh
Q psy15677 76 -----HCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 76 -----~~vFG~Vi~G~dvl~~I~~~ 95 (96)
|+|||||++|||||++|+++
T Consensus 115 ~~~~~~tvFG~Vv~G~dvv~~I~~~ 139 (164)
T 1lop_A 115 LQGWGYCVFAEVVDGMDEVDKIKGV 139 (164)
T ss_dssp TTTSCCCEEEEEEECHHHHHHHHTS
T ss_pred ccCCceEEEEEEecCHHHHHHHHhC
Confidence 99999999999999999875
No 34
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.97 E-value=5.1e-31 Score=176.96 Aligned_cols=84 Identities=23% Similarity=0.328 Sum_probs=71.5
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEeec-CCCCccceEEEEeCCCCCCCC-C---
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVHC-GEGLLGSQFFITLGPDLKSLN-E--- 75 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~~-~~~~~~sqFfI~~~~~~~~ld-~--- 75 (96)
|+|||||||+++.+.+ +.++ ..|++|+.+.++|. +|+||||++ +|++++|||||++.+ .+||| +
T Consensus 51 ~~f~iQgGd~~~~~~~--~~~g-------~~~~dE~~~~l~~~-~G~lsmA~~~~p~t~gSQFfI~~~~-~~~Ld~~~~~ 119 (166)
T 1v9t_A 51 PGFMIQGGGFTEQMQQ--KKPN-------PPIKNEADNGLRNT-RGTIAMARTADKDSATSQFFINVAD-NAFLDHGQRD 119 (166)
T ss_dssp TTTEEEESSBCTTCCB--CCCC-------CCBCCCGGGSCCCC-TTEEEECCCSSTTCBCSCEEEESSC-CGGGSCCSSC
T ss_pred CCcEEEcCCcCcCCCC--CCCC-------CcccccccccccCC-ceEEEEeecCCCCCccceEEEEeCC-ccccCCccCc
Confidence 7899999999865432 3344 46889987667665 899999997 599999999999996 79999 8
Q ss_pred --ceEEEEEEcCHHHHHHHHhh
Q psy15677 76 --HCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 76 --~~vFG~Vi~G~dvl~~I~~~ 95 (96)
|+|||||++|||||++|+++
T Consensus 120 ~~~tvFG~Vv~G~dvv~~I~~~ 141 (166)
T 1v9t_A 120 FGYAVFGKVVKGMDVADKISQV 141 (166)
T ss_dssp CCCCEEEEEEECHHHHHHHHTS
T ss_pred CCeeEEEEEecCHHHHHHHHhC
Confidence 99999999999999999875
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.96 E-value=1.2e-30 Score=175.23 Aligned_cols=84 Identities=23% Similarity=0.264 Sum_probs=71.4
Q ss_pred CCeEEEeCCCCCCCCCCCccccCccCCCCCcCCCCcCCCCCCCCCceEEEee-cCCCCccceEEEEeCCCCCCCC-C---
Q psy15677 1 ANFIAQTGDPTGVGTGGSSVFGLAYGDHARYYEAETQPKIPHSKPGLVSMVH-CGEGLLGSQFFITLGPDLKSLN-E--- 75 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~gg~~~~~~~~~~~~~~~~~e~~~~l~h~~~G~lsma~-~~~~~~~sqFfI~~~~~~~~ld-~--- 75 (96)
|+|||||||++..+. .+.++ ..|++|..+.++| .+|+||||| .+|++++|||||++.+ .++|| +
T Consensus 50 ~~f~iQgGd~~~~~~--~~~~~-------~~~~~E~~~~l~~-~~G~lsmA~~~~p~t~gSQFfI~~~~-~~~Ld~~~~~ 118 (167)
T 3s6m_A 50 NGFMIQGGGFEPGLK--QKPTD-------APIANEANNGLKN-DTYTIAMARTNDPHSATAQFFINVND-NEFLNHSSPT 118 (167)
T ss_dssp TTTEEEESSEETTTE--ECCCC-------CCBCCCGGGCCCC-CTTEEEECCCSSTTCBCSCEEEESSC-CGGGSCCSSS
T ss_pred CCcEEEeccccCCCC--CCCCC-------CccCCcccccccC-CccEEEEecCCCCCCccceEEEEcCC-chhcCCcccc
Confidence 789999999985432 23444 4688887777888 599999999 5799999999999996 79999 8
Q ss_pred -----ceEEEEEEcCHHHHHHHHhh
Q psy15677 76 -----HCVFGEIAEGFDILLKLNNA 95 (96)
Q Consensus 76 -----~~vFG~Vi~G~dvl~~I~~~ 95 (96)
|+|||||++|||||++|+++
T Consensus 119 ~~~~~~~VFG~Vv~G~dvv~~I~~~ 143 (167)
T 3s6m_A 119 PQGWGYAVFGKVVEGQDIVDKIKAV 143 (167)
T ss_dssp TTTCCCCEEEEEEECHHHHHHHTTS
T ss_pred cCCCCceEEEEEEcCHHHHHHHHcC
Confidence 99999999999999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.95 E-value=4.4e-30 Score=189.82 Aligned_cols=87 Identities=30% Similarity=0.430 Sum_probs=72.6
Q ss_pred CCeEEEeCCCCCCCCC---------------------CCccccCccCCCCCcCCCCc----CCCCCCCCCceEEEeec--
Q psy15677 1 ANFIAQTGDPTGVGTG---------------------GSSVFGLAYGDHARYYEAET----QPKIPHSKPGLVSMVHC-- 53 (96)
Q Consensus 1 ~~f~iQgGD~~~~g~g---------------------g~~~~~~~~~~~~~~~~~e~----~~~l~h~~~G~lsma~~-- 53 (96)
|+||||||||+++|+| +.++|+ ..|++|+ .+.++|+.+|+|||||+
T Consensus 224 ~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg-------~~fedegf~~~~~~L~h~~~G~LsMAns~~ 296 (369)
T 3rfy_A 224 DGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYG-------STLEELGLYKAQVVIPFNAFGTMAMAREEF 296 (369)
T ss_dssp EEEEECCCCCCCCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCC-------SSTGGGTEEEEEEEECCCCCCCCCCSSCCC
T ss_pred CCeeEecCCCCCCCCCccCcccCcCcccCccccccCCCCCcCC-------CccccccccccccccccCCCceEEEeecCC
Confidence 6899999999988777 345555 3456553 24788989999999998
Q ss_pred CCCCccceEEEEeCC------CCCCCC-CceEEEEEEcCHHHHHHHHh
Q psy15677 54 GEGLLGSQFFITLGP------DLKSLN-EHCVFGEIAEGFDILLKLNN 94 (96)
Q Consensus 54 ~~~~~~sqFfI~~~~------~~~~ld-~~~vFG~Vi~G~dvl~~I~~ 94 (96)
+||+++|||||++.+ ..+||| +|+|||+|++|||||++|++
T Consensus 297 gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 297 ENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp CCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT
T ss_pred CCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC
Confidence 799999999999941 479999 99999999999999999975
No 37
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=78.16 E-value=2 Score=19.55 Aligned_cols=19 Identities=42% Similarity=0.536 Sum_probs=12.5
Q ss_pred EeecCCCCccceEEEEeCC
Q psy15677 50 MVHCGEGLLGSQFFITLGP 68 (96)
Q Consensus 50 ma~~~~~~~~sqFfI~~~~ 68 (96)
||........|..||||.+
T Consensus 1 ma~kpeKR~aSSvFITLap 19 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAP 19 (26)
T ss_dssp CCCCSSSSCEEEEEEEECC
T ss_pred CCCcchhheeeeEEEEecC
Confidence 3333344567889999985
No 38
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=40.39 E-value=24 Score=23.53 Aligned_cols=61 Identities=23% Similarity=0.211 Sum_probs=35.2
Q ss_pred CCCCcCCCCCCCCCceEEEeec----------C--C------CCccceEEEEeCCCCCCC--C----CceEEEEEEcCHH
Q psy15677 32 YEAETQPKIPHSKPGLVSMVHC----------G--E------GLLGSQFFITLGPDLKSL--N----EHCVFGEIAEGFD 87 (96)
Q Consensus 32 ~~~e~~~~l~h~~~G~lsma~~----------~--~------~~~~sqFfI~~~~~~~~l--d----~~~vFG~Vi~G~d 87 (96)
.+.||. ..+-.+|-|++-.- | + .+....+.|-.+.+.-.+ | --.+|++|+||+|
T Consensus 83 ~g~EN~--T~~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpGN~F~TIveGle 160 (188)
T 3kop_A 83 PGAENT--TVTPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPGNVFATIVEGLD 160 (188)
T ss_dssp CCSCSE--ESSCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCEEEEEEEEESHH
T ss_pred CCcCCC--CCCCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecCcEEEEEecCHH
Confidence 455654 23455899997411 1 1 111246666666422111 2 3579999999999
Q ss_pred HHHHHHh
Q psy15677 88 ILLKLNN 94 (96)
Q Consensus 88 vl~~I~~ 94 (96)
-|.++-+
T Consensus 161 ~la~~c~ 167 (188)
T 3kop_A 161 EMAAACQ 167 (188)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 39
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=38.89 E-value=36 Score=25.09 Aligned_cols=49 Identities=20% Similarity=0.200 Sum_probs=37.5
Q ss_pred CCCceEEEeecCCCCccceEEEEeCCCCCCCCCceEEEEEEc-CHHHHHHH
Q psy15677 43 SKPGLVSMVHCGEGLLGSQFFITLGPDLKSLNEHCVFGEIAE-GFDILLKL 92 (96)
Q Consensus 43 ~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld~~~vFG~Vi~-G~dvl~~I 92 (96)
.++|.|.+.|+.-.....+.-|++.+ .|.-.+.-|.|+|.+ -+.+|+-|
T Consensus 326 r~rGdItIdN~~ygRY~GElQI~l~d-lp~d~r~NVVG~I~~edl~LLd~I 375 (385)
T 1x7f_A 326 QERGQVVIGNNSFGKYKGELQIILKE-MPIDERKNIVGTIAEEELFLLDYV 375 (385)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEECSC-BCCCTTEEEEEEECGGGGGGGGGC
T ss_pred ccCCcEEEeCCCccccccEeeEEccc-CCCCCCeeEEEEECHHHHHHHHhc
Confidence 35899999998877777899999986 554338889999996 45555544
No 40
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=34.94 E-value=36 Score=24.96 Aligned_cols=49 Identities=18% Similarity=0.114 Sum_probs=37.5
Q ss_pred CCCceEEEeecCCCCccceEEEEeCCCCCCCCCceEEEEEEc-CHHHHHHH
Q psy15677 43 SKPGLVSMVHCGEGLLGSQFFITLGPDLKSLNEHCVFGEIAE-GFDILLKL 92 (96)
Q Consensus 43 ~~~G~lsma~~~~~~~~sqFfI~~~~~~~~ld~~~vFG~Vi~-G~dvl~~I 92 (96)
.++|.|.+-|..-.....+.-|++.+ .|.-.+.-|.|+|.+ -+.+|+-|
T Consensus 300 r~rGdItIdN~~ygrY~GElQI~l~d-lp~d~r~NVVG~I~~edl~LLd~I 349 (372)
T 2p0o_A 300 RPVGTVTIDNEKYGRYMGEIQVTLVD-LPKDEKVNTITRIIDKDQTILPLI 349 (372)
T ss_dssp BCTTEEEEECGGGGGGTTCEEEESSC-BCCCTTEEEEEEBCGGGGGGGGGC
T ss_pred ccCCeEEEeCCCccccccEeeEEccc-CCCCCCeEEEEEECHHHHHHHHhc
Confidence 35899999998877777899999986 654338889999986 45555443
No 41
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=29.91 E-value=10 Score=23.95 Aligned_cols=43 Identities=26% Similarity=0.321 Sum_probs=27.8
Q ss_pred CCceEEEeecCCCCccceEEEEeCCCCCCC------C-CceEEEEEEcCHHHHHHH
Q psy15677 44 KPGLVSMVHCGEGLLGSQFFITLGPDLKSL------N-EHCVFGEIAEGFDILLKL 92 (96)
Q Consensus 44 ~~G~lsma~~~~~~~~sqFfI~~~~~~~~l------d-~~~vFG~Vi~G~dvl~~I 92 (96)
.+|.|+.-..+. -+-|-+++ .|.. - .-.++|||.+|++.+.++
T Consensus 74 ~~GDIaYw~pgg-----~LaIFyg~-~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 74 EIGDVGYWPPGK-----ALCLFFGK-TPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp CTTEEEEEGGGT-----EEEEESSC-CTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CCCcEEEeCCCC-----EEEEEeCC-CccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 478888765433 34455554 3322 1 468999999999887664
Done!