Query psy15688
Match_columns 70
No_of_seqs 105 out of 729
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 18:57:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r90_A Malignant T cell-amplif 99.9 2.1E-24 7.1E-29 140.3 3.8 70 1-70 112-181 (188)
2 3d79_A PUA domain, putative un 99.8 1.8E-20 6E-25 120.6 6.0 65 1-68 114-178 (179)
3 1q7h_A Conserved hypothetical 99.8 1.5E-20 5.1E-25 117.9 5.0 64 1-68 90-153 (153)
4 2cx0_A Hypothetical protein AP 99.8 1.1E-19 3.8E-24 117.7 4.9 64 1-67 112-179 (187)
5 3zv0_C H/ACA ribonucleoprotein 99.7 4.6E-17 1.6E-21 106.4 7.1 64 1-68 95-163 (195)
6 2q07_A Uncharacterized protein 99.5 1.9E-14 6.6E-19 99.0 5.7 56 1-62 245-300 (306)
7 1iq8_A Archaeosine tRNA-guanin 99.3 5.5E-12 1.9E-16 92.6 6.9 55 1-59 527-581 (582)
8 3u28_A H/ACA ribonucleoprotein 99.0 7.4E-10 2.5E-14 78.7 7.1 63 2-68 287-354 (400)
9 2p38_A Protein involved in rib 98.4 3E-07 1E-11 58.5 4.2 50 1-63 115-164 (166)
10 1sqw_A Saccharomyces cerevisia 98.1 1.7E-05 5.8E-10 51.5 7.2 55 3-61 116-171 (188)
11 2aus_C Pseudouridine synthase; 98.0 1.6E-05 5.6E-10 55.1 6.7 47 14-61 280-326 (334)
12 2j5v_A Glutamate 5-kinase; pro 98.0 7.6E-06 2.6E-10 57.1 4.5 42 1-46 296-337 (367)
13 2apo_A Probable tRNA pseudouri 97.9 3.5E-05 1.2E-09 54.0 6.6 47 14-61 299-345 (357)
14 1ug1_A KIAA1010 protein; struc 55.2 11 0.00038 21.5 2.8 13 14-26 35-47 (92)
15 3r8s_P 50S ribosomal protein L 50.6 13 0.00043 22.0 2.6 16 11-26 15-30 (114)
16 2hd9_A UPF0310 protein PH1033; 48.5 27 0.00091 20.9 3.9 15 13-27 33-47 (145)
17 2p1g_A Putative xylanase; stru 46.6 36 0.0012 22.6 4.6 27 13-39 170-197 (249)
18 3v2d_T 50S ribosomal protein L 45.3 17 0.00057 22.5 2.6 16 11-26 18-33 (146)
19 2gbs_A Hypothetical protein RP 44.1 18 0.0006 22.2 2.6 42 14-56 42-87 (145)
20 2ftc_K 39S ribosomal protein L 43.9 15 0.00052 21.1 2.1 15 12-26 1-15 (98)
21 1zce_A Hypothetical protein AT 42.4 20 0.0007 22.2 2.7 29 14-43 43-71 (155)
22 2eve_A Hypothetical protein ps 41.0 22 0.00075 22.1 2.7 28 14-41 40-67 (157)
23 1o9y_A HRCQ2; secretory protei 40.8 17 0.00058 19.8 2.0 32 32-63 21-52 (84)
24 2bz8_A SH3-domain kinase bindi 39.1 28 0.00095 16.8 2.5 14 14-27 19-32 (58)
25 3dcl_A TM1086; SAD, structural 39.1 35 0.0012 23.1 3.6 45 12-58 210-262 (284)
26 3c0k_A UPF0064 protein YCCW; P 39.1 30 0.001 23.3 3.4 24 14-38 33-56 (396)
27 1jo8_A ABP1P, actin binding pr 38.1 29 0.001 16.7 2.5 14 14-27 18-31 (58)
28 1o6a_A Putative flagellar moto 37.8 45 0.0016 18.4 3.5 32 32-63 25-56 (96)
29 2p5d_A UPF0310 protein mjecl36 37.0 35 0.0012 20.4 3.2 28 14-41 37-69 (147)
30 1g2b_A Spectrin alpha chain; c 36.9 31 0.0011 17.0 2.5 14 14-27 39-52 (62)
31 2ar1_A Hypothetical protein; s 36.5 49 0.0017 20.8 3.8 28 14-41 58-85 (172)
32 2drm_A Acanthamoeba myosin IB; 36.4 33 0.0011 16.4 2.5 14 14-27 21-34 (58)
33 1uti_A GRB2-related adaptor pr 36.1 33 0.0011 16.5 2.5 14 14-27 19-32 (58)
34 1cka_A C-CRK N-terminal SH3 do 36.0 32 0.0011 16.4 2.5 14 14-27 19-32 (57)
35 1sem_A SEM-5; SRC-homology 3 ( 34.9 34 0.0012 16.4 2.5 14 14-27 20-33 (58)
36 2iim_A Proto-oncogene tyrosine 34.5 36 0.0012 16.6 2.5 15 14-28 24-38 (62)
37 2oaw_A Spectrin alpha chain, b 34.3 36 0.0012 16.6 2.5 14 14-27 19-32 (65)
38 2a28_A BZZ1 protein; SH3 domai 34.3 30 0.001 16.4 2.1 14 14-27 18-31 (54)
39 1y0m_A 1-phosphatidylinositol- 34.1 37 0.0013 16.5 2.5 14 14-27 21-34 (61)
40 1te7_A Hypothetical UPF0267 pr 33.9 63 0.0022 18.0 4.3 24 14-37 32-55 (103)
41 1uj0_A Signal transducing adap 33.9 37 0.0013 16.6 2.5 14 14-27 23-36 (62)
42 4h4j_A Hypothetical protein; P 33.6 34 0.0012 22.4 2.9 31 12-42 168-199 (240)
43 2nwm_A Vinexin; cell adhesion; 33.6 37 0.0013 17.0 2.5 14 14-27 19-32 (65)
44 3tu8_A Burkholderia lethal fac 33.5 23 0.00079 22.1 1.9 30 39-68 119-153 (210)
45 2vwf_A Growth factor receptor- 33.2 39 0.0013 16.1 2.5 14 14-27 20-33 (58)
46 1gcq_C VAV proto-oncogene; SH3 33.2 30 0.001 17.3 2.1 13 14-26 28-40 (70)
47 2lj0_A Sorbin and SH3 domain-c 32.8 29 0.00099 17.8 2.0 13 14-26 24-36 (65)
48 2djq_A SH3 domain containing r 32.5 47 0.0016 16.5 2.8 13 14-26 25-37 (68)
49 2dl4_A Protein STAC; SH3 domai 32.2 48 0.0016 16.5 2.8 14 14-27 25-38 (68)
50 1b07_A Protein (proto-oncogene 32.1 39 0.0013 16.9 2.5 14 14-27 21-34 (65)
51 2g6f_X RHO guanine nucleotide 31.4 32 0.0011 16.6 2.0 13 14-26 22-34 (59)
52 2b86_A Cytoplasmic protein NCK 31.1 41 0.0014 17.1 2.5 14 14-27 22-35 (67)
53 1zuy_A Myosin-5 isoform; SH3 d 31.0 33 0.0011 16.4 2.0 13 14-26 19-31 (58)
54 1k4u_S Phagocyte NADPH oxidase 30.9 31 0.0011 16.8 1.9 13 14-26 23-35 (62)
55 2kxd_A 11-MER peptide, SH3 dom 30.8 43 0.0015 17.0 2.5 14 14-27 17-30 (73)
56 1oot_A Hypothetical 40.4 kDa p 30.8 36 0.0012 16.5 2.1 13 14-26 21-33 (60)
57 2zjr_M 50S ribosomal protein L 30.7 26 0.0009 22.0 1.9 16 11-26 23-38 (166)
58 1k1z_A VAV; SH3, proto-oncogen 30.7 34 0.0012 17.6 2.1 13 14-26 36-48 (78)
59 1x2p_A Protein arginine N-meth 30.7 51 0.0017 16.3 2.8 14 14-27 25-38 (68)
60 1tuc_A Alpha-spectrin; capping 30.3 46 0.0016 16.4 2.5 14 14-27 7-20 (63)
61 1zlm_A Osteoclast stimulating 30.1 47 0.0016 15.9 2.5 13 14-26 21-33 (58)
62 2v1q_A SLA1, cytoskeleton asse 29.2 39 0.0013 16.2 2.1 13 14-26 20-32 (60)
63 2ak5_A RHO guanine nucleotide 29.0 50 0.0017 16.1 2.5 14 14-27 24-37 (64)
64 2lx7_A GAS-7, growth arrest-sp 28.8 24 0.00082 17.9 1.2 13 14-26 22-34 (60)
65 2ebp_A SAM and SH3 domain-cont 28.7 47 0.0016 17.0 2.5 14 14-27 29-42 (73)
66 2pqh_A Spectrin alpha chain, b 28.6 48 0.0016 17.2 2.5 14 14-27 20-33 (80)
67 2gnc_A SLIT-ROBO RHO GTPase-ac 28.6 38 0.0013 16.5 2.0 13 14-26 24-36 (60)
68 1gl5_A Tyrosine-protein kinase 28.2 50 0.0017 16.4 2.5 14 14-27 20-33 (67)
69 2jte_A CD2-associated protein; 28.2 41 0.0014 16.5 2.1 13 14-26 24-36 (64)
70 2jw4_A Cytoplasmic protein NCK 28.1 57 0.002 16.5 2.7 15 14-28 25-39 (72)
71 1yn8_A NBP2, NAP1-binding prot 28.1 39 0.0013 16.1 2.0 13 14-26 19-31 (59)
72 2as0_A Hypothetical protein PH 28.0 72 0.0025 21.4 3.9 24 14-38 32-55 (396)
73 1zx6_A YPR154WP; SH3 domain, p 27.9 40 0.0014 16.2 2.0 13 14-26 20-32 (58)
74 1zuu_A BZZ1 protein; SH3 domai 27.8 39 0.0013 16.1 1.9 15 14-28 19-33 (58)
75 3ngp_A Spectrin alpha chain, b 27.8 55 0.0019 15.7 2.5 14 14-27 24-37 (62)
76 3eop_A Thymocyte nuclear prote 27.7 86 0.0029 19.8 3.9 28 14-41 51-78 (176)
77 1x2k_A OSTF1, osteoclast stimu 27.7 60 0.002 16.1 2.7 13 14-26 25-37 (68)
78 3ulr_B SRC substrate cortactin 27.6 55 0.0019 15.9 2.5 14 14-27 27-40 (65)
79 2bzy_A CRK-like protein, CRKL 27.6 40 0.0014 16.8 2.0 13 14-26 21-33 (67)
80 2dl3_A Sorbin and SH3 domain-c 27.6 53 0.0018 16.2 2.5 13 14-26 25-37 (68)
81 2k2m_A EPS8-like protein 1; al 27.4 52 0.0018 16.4 2.5 14 14-27 26-39 (68)
82 2j6f_A CD2-associated protein; 27.3 41 0.0014 16.4 2.0 13 14-26 19-31 (62)
83 1tg0_A BBC1 protein, myosin ta 27.3 40 0.0014 16.8 2.0 13 14-26 25-37 (68)
84 3rnj_A Brain-specific angiogen 27.2 32 0.0011 17.1 1.5 12 14-25 26-37 (67)
85 2xmf_A Myosin 1E SH3; motor pr 27.1 42 0.0014 16.2 2.0 13 14-26 23-35 (60)
86 2yuo_A CIP85, RUN and TBC1 dom 27.0 54 0.0019 16.8 2.5 14 14-27 25-38 (78)
87 1w70_A Neutrophil cytosol fact 26.9 42 0.0014 16.3 2.0 13 14-26 22-34 (60)
88 1wxb_A Epidermal growth factor 26.9 54 0.0019 16.3 2.5 14 14-27 25-38 (68)
89 2fpe_A C-JUN-amino-terminal ki 26.8 42 0.0014 16.3 2.0 13 14-26 21-33 (62)
90 1wyx_A CRK-associated substrat 26.8 45 0.0015 16.6 2.1 14 14-27 21-34 (69)
91 2ysq_A RHO guanine nucleotide 26.5 64 0.0022 16.6 2.8 14 14-27 28-41 (81)
92 2x3w_D Syndapin I, protein kin 26.4 34 0.0012 16.5 1.5 13 14-26 21-33 (60)
93 2j05_A RAS GTPase-activating p 26.4 43 0.0015 16.5 2.0 13 14-26 24-36 (65)
94 4e6r_A Cytoplasmic protein NCK 26.4 44 0.0015 15.8 2.0 14 14-27 19-32 (58)
95 1x6g_A Megakaryocyte-associate 26.2 58 0.002 16.9 2.6 14 14-27 35-48 (81)
96 3cqt_A P59-FYN, proto-oncogene 26.0 57 0.002 17.0 2.5 14 14-27 23-36 (79)
97 2ew3_A SH3-containing GRB2-lik 26.0 44 0.0015 16.9 2.0 13 14-26 21-33 (68)
98 3uep_A YSCQ-C, type III secret 25.9 37 0.0013 19.0 1.8 32 32-63 25-56 (96)
99 2o9s_A Ponsin; SH3 domain, sig 25.9 44 0.0015 16.5 2.0 13 14-26 24-36 (67)
100 1w1f_A Tyrosine-protein kinase 25.9 45 0.0015 16.3 2.0 14 14-27 25-38 (65)
101 2cre_A HEF-like protein; SH3 d 25.9 41 0.0014 16.8 1.9 13 14-26 25-37 (71)
102 2ydl_A SH3 domain-containing k 25.8 47 0.0016 16.9 2.1 13 14-26 20-32 (69)
103 2l66_A SSO7C4, transcriptional 25.7 67 0.0023 15.6 2.7 16 14-29 25-40 (53)
104 2vkn_A Protein SSU81; membrane 25.5 52 0.0018 16.5 2.2 13 14-26 25-37 (70)
105 1ue9_A Intersectin 2; beta bar 25.5 51 0.0017 16.9 2.2 13 14-26 25-37 (80)
106 1wxt_A Hypothetical protein FL 25.5 60 0.0021 16.1 2.5 15 14-28 25-39 (68)
107 2ct4_A CDC42-interacting prote 25.3 62 0.0021 16.1 2.5 14 14-27 25-38 (70)
108 2dil_A Proline-serine-threonin 25.3 63 0.0021 16.0 2.5 13 14-26 26-38 (69)
109 3u23_A CD2-associated protein; 25.0 48 0.0016 16.1 2.0 13 14-26 25-37 (65)
110 1ruw_A Myosin-3 isoform, MYO3; 25.0 47 0.0016 16.5 2.0 13 14-26 21-33 (69)
111 2im9_A Hypothetical protein; s 24.9 77 0.0026 21.9 3.5 43 13-55 239-294 (333)
112 2k9g_A SH3 domain-containing k 24.8 51 0.0017 16.6 2.1 13 14-26 27-39 (73)
113 3thk_A Spectrin alpha chain, b 24.8 64 0.0022 16.1 2.5 14 14-27 23-36 (73)
114 2dl7_A KIAA0769 protein; SH3 d 24.5 52 0.0018 16.6 2.1 13 14-26 26-38 (73)
115 2csi_A RIM-BP2, RIM binding pr 24.2 50 0.0017 16.9 2.0 14 14-27 32-45 (76)
116 2yun_A Nostrin; nitric oxide s 24.2 65 0.0022 16.5 2.5 13 14-26 25-37 (79)
117 1neg_A Spectrin alpha chain, b 24.1 64 0.0022 17.1 2.5 14 14-27 35-48 (83)
118 1x2q_A Signal transducing adap 24.1 72 0.0025 16.8 2.7 13 14-26 35-47 (88)
119 2da9_A SH3-domain kinase bindi 24.1 47 0.0016 16.6 1.9 13 14-26 25-37 (70)
120 2eyx_A V-CRK sarcoma virus CT1 23.9 37 0.0013 17.0 1.4 13 14-26 26-38 (67)
121 2kxc_A Brain-specific angiogen 23.8 40 0.0014 16.7 1.5 12 14-25 25-36 (67)
122 2dmo_A Neutrophil cytosol fact 23.8 46 0.0016 16.6 1.8 13 14-26 25-37 (68)
123 2fpf_A C-JUN-amino-terminal ki 23.8 46 0.0016 16.7 1.8 13 14-26 24-36 (71)
124 1u5s_A Cytoplasmic protein NCK 23.7 49 0.0017 16.5 1.9 13 14-26 24-36 (71)
125 2ege_A Uncharacterized protein 23.6 45 0.0016 17.1 1.8 13 14-26 32-44 (75)
126 3eg3_A Proto-oncogene tyrosine 23.6 53 0.0018 15.8 2.0 12 14-25 23-34 (63)
127 2jt4_A Cytoskeleton assembly c 23.5 52 0.0018 16.4 2.0 13 14-26 24-36 (71)
128 1csk_A C-SRC SH3 domain; phosp 23.4 52 0.0018 16.5 2.0 12 14-25 29-40 (71)
129 2d8j_A FYN-related kinase; SH3 23.4 55 0.0019 16.6 2.1 13 14-26 25-37 (77)
130 2v1r_A Peroxisomal membrane pr 23.3 52 0.0018 16.9 2.0 14 14-27 33-46 (80)
131 3h0h_A Proto-oncogene tyrosine 23.1 70 0.0024 15.9 2.5 14 14-27 33-46 (73)
132 3c0c_A Endophilin-A2; endocyto 23.0 54 0.0018 16.6 2.0 13 14-26 31-43 (73)
133 2enm_A Sorting nexin-9; SH3-li 22.9 65 0.0022 16.3 2.3 14 14-27 28-41 (77)
134 1i07_A Epidermal growth factor 22.9 43 0.0015 16.2 1.5 13 14-26 19-31 (60)
135 2lcs_A NAP1-binding protein 2; 22.8 54 0.0018 16.8 2.0 13 14-26 23-35 (73)
136 2cuc_A SH3 domain containing r 22.8 55 0.0019 16.2 2.0 13 14-26 25-37 (70)
137 4esr_A Jouberin; AHI-1, AHI1, 22.6 56 0.0019 16.2 2.0 14 14-27 24-37 (69)
138 2dl8_A SLIT-ROBO RHO GTPase-ac 22.5 55 0.0019 16.5 2.0 13 14-26 27-39 (72)
139 4f14_A Nebulette; SH3 domain, 22.5 57 0.0019 15.7 2.0 13 14-26 24-36 (64)
140 1v1c_A Obscurin; muscle, sarco 22.4 56 0.0019 17.6 2.0 14 14-27 25-38 (71)
141 1yfb_A Transition state regula 22.4 71 0.0024 16.2 2.3 15 14-28 35-49 (59)
142 2ed1_A 130 kDa phosphatidylino 22.3 49 0.0017 16.9 1.7 13 14-26 28-40 (76)
143 1spk_A RSGI RUH-010, riken cDN 22.2 44 0.0015 16.8 1.5 13 14-26 26-38 (72)
144 3tee_A Flagella basal BODY P-r 22.2 1.6E+02 0.0053 18.7 4.4 27 14-40 140-167 (219)
145 1uhc_A KIAA1010 protein; beta 22.1 59 0.002 16.7 2.1 14 14-27 31-44 (79)
146 2jxb_A T-cell surface glycopro 22.1 65 0.0022 16.9 2.3 14 14-27 49-62 (86)
147 2i0n_A Class VII unconventiona 21.8 41 0.0014 17.5 1.4 14 14-27 28-41 (80)
148 1x43_A Endophilin B1, SH3 doma 21.8 63 0.0021 16.7 2.1 13 14-26 35-47 (81)
149 1wx6_A Cytoplasmic protein NCK 21.7 71 0.0024 16.8 2.4 13 14-26 35-47 (91)
150 2fei_A CD2-associated protein; 21.5 39 0.0013 17.0 1.2 13 14-26 19-31 (65)
151 2dbk_A CRK-like protein; struc 21.5 58 0.002 17.2 2.0 13 14-26 36-48 (88)
152 2l0a_A STAM-1, signal transduc 21.4 60 0.002 16.7 2.0 13 14-26 35-47 (72)
153 2ed0_A ABL interactor 2; coile 21.4 58 0.002 16.7 1.9 13 14-26 35-47 (78)
154 2ov7_A 50S ribosomal protein L 21.3 30 0.001 20.9 0.8 27 20-46 69-96 (137)
155 4glm_A Dynamin-binding protein 21.2 62 0.0021 16.0 2.0 13 14-26 31-43 (72)
156 1x69_A Cortactin isoform A; SH 21.2 70 0.0024 16.4 2.2 13 14-26 35-47 (79)
157 2ke9_A Caskin-2; SH3 domain, A 21.1 47 0.0016 17.6 1.5 14 14-27 37-50 (83)
158 1y08_A Hypothetical protein SP 21.1 58 0.002 22.5 2.3 51 16-66 257-321 (323)
159 2oi3_A Tyrosine-protein kinase 21.0 70 0.0024 16.6 2.2 14 14-27 43-56 (86)
160 2jv2_A Putative uncharacterize 20.7 69 0.0024 17.5 2.2 24 14-37 41-64 (83)
161 1jqq_A PEX13P, peroxisomal mem 20.7 61 0.0021 17.1 2.0 14 14-27 33-46 (92)
162 2yuq_A Tyrosine-protein kinase 20.6 64 0.0022 16.8 2.0 14 14-27 37-50 (85)
163 2jmc_A Spectrin alpha chain, b 20.4 47 0.0016 17.1 1.4 13 14-26 9-21 (77)
164 4dmg_A Putative uncharacterize 20.3 67 0.0023 22.0 2.5 19 18-37 37-55 (393)
165 2ekh_A SH3 and PX domain-conta 20.2 65 0.0022 16.7 2.0 14 14-27 26-39 (80)
166 1aww_A ATK, AMGX1, BPK, bruton 20.2 46 0.0016 16.5 1.3 13 14-26 26-38 (67)
167 1j3t_A Intersectin 2; beta bar 20.2 66 0.0023 16.3 2.0 15 14-28 28-42 (74)
168 2ftc_A Mitochondrial ribosomal 20.2 32 0.0011 21.5 0.8 31 14-46 114-147 (189)
169 4ag1_C Fynomer; hydrolase-de n 20.2 87 0.003 16.4 2.5 14 14-27 24-37 (84)
170 2rf0_A Mitogen-activated prote 20.1 69 0.0024 17.2 2.1 13 14-26 47-59 (89)
No 1
>3r90_A Malignant T cell-amplified sequence 1; structural genomics consortium, surface entropy reduction, S binding protein; 1.70A {Homo sapiens}
Probab=99.89 E-value=2.1e-24 Score=140.28 Aligned_cols=70 Identities=63% Similarity=1.100 Sum_probs=65.6
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeecccccccccC
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLNDGLWNMKNIK 70 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~LW~~~~~~ 70 (70)
|+|||++.++.+++|++||+|+|++++++.|+|||+++||++||.+.+||++|+++|++||+||+++..|
T Consensus 112 m~PGv~~~~~~~~~i~~Gd~V~V~~~~~~~~vAVG~a~mss~e~~~~~kG~aV~v~H~~~D~LW~~~~~~ 181 (188)
T 3r90_A 112 MCPGLTSPGAKLYPAAVDTIVAIMAAGAAHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKTYK 181 (188)
T ss_dssp ETHHHHSTTCBCCCCCTTCEEEEEETTCSSCSEEEEESSCHHHHHHHCCSEEEEEEEETTSHHHHHCBSS
T ss_pred ccCeEEccCCCcccccCCCEEEEEECCCCcEEEEEEEEeCHHHHhhcCCcEEEEEEEEECchhhhcCCcc
Confidence 7999999987667899999999999888999999999999999998899999999999999999998754
No 2
>3d79_A PUA domain, putative uncharacterized protein PH0734; unknown function; 1.73A {Pyrococcus horikoshii}
Probab=99.82 E-value=1.8e-20 Score=120.60 Aligned_cols=65 Identities=26% Similarity=0.513 Sum_probs=61.1
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeecccccccc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLNDGLWNMKN 68 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~LW~~~~ 68 (70)
|+|||++.++ +|++||+|+|+.++++.++|+|++.||++||.+.+||++|+++|+++|+||++++
T Consensus 114 ~~~GV~~~~g---~f~~Gd~V~v~~~~~g~~iavG~~~~ss~e~~~~~kG~av~~~H~~~D~Lw~~~~ 178 (179)
T 3d79_A 114 MAPGIVDADE---GIKEGDFVFVVEEKYGRPLAIGIALMSGKVMKEKNRGKAVKVIHHARDKIWEVTA 178 (179)
T ss_dssp EGGGEEEECT---TCCTTCEEEEEETTTCCEEEEEEESSCHHHHHHCSSSEEEEEEEETTSHHHHHHC
T ss_pred CCCcEEEccC---CccCCCEEEEEECCCCeEEEEEEEEcCHHHHHhcCCceEEEEEEEeCCEEEEeec
Confidence 6899999887 9999999999998789999999999999999988899999999999999999864
No 3
>1q7h_A Conserved hypothetical protein; structural genomics, MCSG, PSI, PR structure initiative; 2.10A {Thermoplasma acidophilum dsm 1728} SCOP: b.122.1.1 d.17.6.2
Probab=99.81 E-value=1.5e-20 Score=117.86 Aligned_cols=64 Identities=19% Similarity=0.429 Sum_probs=60.5
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeecccccccc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLNDGLWNMKN 68 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~LW~~~~ 68 (70)
|+|||++.++ +|++||.|+|+++ ++.++|+|++.+|++|+.+..+|++++++|+++|+||+++.
T Consensus 90 l~~GV~~~~~---~~~~gd~V~V~~~-~g~~ia~G~~~~ss~e~~~~~~G~~v~v~h~~~D~lw~~~~ 153 (153)
T 1q7h_A 90 FAPGIVSMDD---SIRKGDMIFVKSS-KGYFIAVGMAEMDAGEVMATKRGKAARIIHFPGDELIRAFP 153 (153)
T ss_dssp EGGGEEEECT---TCCTTCEEEEEET-TSCEEEEEEESSCHHHHHHHCCSEEEEEEECTTSHHHHHCC
T ss_pred CccccCcccC---ceeCCCEEEEEEC-CCCEEEEEEEecCHHHHHhcCCCeEEEEEEEcCCEEEEecC
Confidence 6899999887 9999999999998 89999999999999999888899999999999999999874
No 4
>2cx0_A Hypothetical protein APE0525; PUA domain, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} SCOP: b.122.1.1 d.17.6.4 PDB: 2cx1_A* 1zs7_A
Probab=99.78 E-value=1.1e-19 Score=117.73 Aligned_cols=64 Identities=20% Similarity=0.517 Sum_probs=59.5
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHH----hcCCcceEEEEEEEeeccccccc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDI----VRVNKGIGVENFHYLNDGLWNMK 67 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~----~~~~kG~av~v~h~~~D~LW~~~ 67 (70)
|+|||++.++ +|++||+|+|+.++++.++|+|++.+|++|+ .+..||++++++|++||+||+++
T Consensus 112 l~~GV~~~~g---~f~~Gd~V~I~~~~~g~~iA~G~~~~ss~ei~~~~~~~~kG~av~v~H~~gD~Lw~~~ 179 (187)
T 2cx0_A 112 MIPGVVGVEG---SFTRGDVVAALYHETRTPVMVGVAEVDSSALEKLYREKARGRAVRRVHRLGDALWELA 179 (187)
T ss_dssp EGGGEEEEEE---CCCTTCEEEEEETTTTEEEEEEEESSCHHHHHHHHHHTCCSEEEEEEEETTSHHHHHH
T ss_pred CCCccEeCCC---CcCCCCEEEEEECCCCeEEEEEEEecCHHHHhHHHhccCCceEEEEEEEcCCeEEhhh
Confidence 7899999876 9999999999998779999999999999999 66789999999999999999875
No 5
>3zv0_C H/ACA ribonucleoprotein complex subunit 4; cell cycle, RNP assembly, X-linked dyskeratosis congenita; 2.80A {Saccharomyces cerevisiae}
Probab=99.69 E-value=4.6e-17 Score=106.45 Aligned_cols=64 Identities=19% Similarity=0.356 Sum_probs=60.8
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeec-----ccccccc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLND-----GLWNMKN 68 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D-----~LW~~~~ 68 (70)
|+|||+..++ +|++||+|.|++. ++.++|+|++.+|++||...++|++|++.|+++| .+|.+|+
T Consensus 95 l~pGV~~v~g---~F~~GD~V~V~~~-~G~~IAvG~a~~sS~Ei~~~~kG~aVkv~rVimd~~~Yp~~W~~gp 163 (195)
T 3zv0_C 95 MIPGLLRYEE---GIELYDEIVLITT-KGEAIAVAIAQMSTVDLASCDHGVVASVKRCIMERDLYPRRWGLGP 163 (195)
T ss_dssp EGGGEEEEET---TCCTTCEEEEECT-TCCEEEEEEESSCHHHHHHCSSSEEEEEEEECBCTTSSCCCCSSCC
T ss_pred cCCCcEecCC---CcCCCCEEEEEcC-CCCEEEEEEEcCCHHHHhhcCCcEEEEEEEEEeCCCCcCcccccCc
Confidence 6899999877 9999999999998 7889999999999999999999999999999999 9999997
No 6
>2q07_A Uncharacterized protein AF0587; monomer, structural genomics, PSI-2, protein structure initiative; 2.04A {Archaeoglobus fulgidus dsm 4304} SCOP: b.122.1.1 c.18.1.4 d.17.6.5
Probab=99.51 E-value=1.9e-14 Score=99.04 Aligned_cols=56 Identities=16% Similarity=0.400 Sum_probs=49.1
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeecc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLNDG 62 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~ 62 (70)
|+|||++.++ ++++||.|+| + ++.++|||+|+||++||.+.+||++|++.|+++|.
T Consensus 245 ~~pGv~~~~~---~i~~gd~V~V--~-~g~~vavG~a~ms~~em~~~~kG~aV~v~~~~~~~ 300 (306)
T 2q07_A 245 FAGGVLRADE---KIRPNDVVVF--H-NSRIFGVGLAAMSGKEMAGSEKGIAINVKRKFSEG 300 (306)
T ss_dssp EGGGEEEECT---TCCTTCEEEE--E-CSSCEEEEEESSCHHHHSCC--CEEEEEEEEEC--
T ss_pred eCCeeEeCCC---CcCCCCEEEE--E-CCEEEEEEEEeeCHHHHhhcCCceEEEEEEEccCC
Confidence 7899999987 8999999999 4 58999999999999999999999999999999986
No 7
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=99.29 E-value=5.5e-12 Score=92.61 Aligned_cols=55 Identities=16% Similarity=0.134 Sum_probs=52.3
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEe
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYL 59 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~ 59 (70)
|+|||++.++ +|++||+|+|+.+ ++.++|+|++.+|++||.+.+||++|++.|++
T Consensus 527 l~~GV~~~~g---~f~~Gd~V~V~~~-~g~~ia~G~a~~ss~ei~~~~kG~aV~v~~~~ 581 (582)
T 1iq8_A 527 FAKFVIFADP---GIRPYDEVLVVNE-NDELLATGQALLSGREMIVFQYGRAVKVRKGV 581 (582)
T ss_dssp EGGGEEEECT---TCCTTCEEEEECT-TCCEEEEEEESSCHHHHHHCCSSEEEEEEEEC
T ss_pred CCCceEecCC---CcCCCCEEEEEeC-CCCEEEEEEEeeCHHHHHhcCCceEEEEEecc
Confidence 6899999887 9999999999998 89999999999999999999999999999986
No 8
>3u28_A H/ACA ribonucleoprotein complex subunit 4; pseudouridine synthase, pseudouridylation, H/ACA RNA; 1.90A {Saccharomyces cerevisiae} PDB: 3uai_A
Probab=99.02 E-value=7.4e-10 Score=78.66 Aligned_cols=63 Identities=17% Similarity=0.339 Sum_probs=53.6
Q ss_pred cceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeec-----ccccccc
Q psy15688 2 CPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLND-----GLWNMKN 68 (70)
Q Consensus 2 ~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D-----~LW~~~~ 68 (70)
.||+...++ +++.|+.|.+++. ++.++|+|++.||+++|...++|++|++.+++++ ..|-+|+
T Consensus 287 ~pgVl~~~~---~i~~gd~VvVvt~-kGelLAIG~A~mss~em~~~~~G~vvk~~rV~m~~~~yp~~w~~~~ 354 (400)
T 3u28_A 287 IPGLLRYEE---GIELYDEIVLITT-KGEAIAVAIAQMSTVDLASCDHGVVASVKRCIMERDLYPRRWGLGP 354 (400)
T ss_dssp GGGEEEECT---TCCTTCEEEEECT-TCCEEEEEEESSCHHHHHHCSSSEEEEEEEECSCTTSSCCCC----
T ss_pred cCccccccc---cCCCCCEEEEEeC-CCcEEEEEEEEeCHHHHhhcCCcEEEEEEEEeecCCCCccccCcCh
Confidence 578776655 7889999999998 8999999999999999999999999999999998 5788876
No 9
>2p38_A Protein involved in ribosomal biogenesis; two alpha/beta domains, PUA domain, biosynthetic protein; 1.80A {Pyrococcus abyssi}
Probab=98.39 E-value=3e-07 Score=58.52 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=40.7
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeeccc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLNDGL 63 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~L 63 (70)
|.|||.+.+ +++|+.|+|+.. ++.|+|+|++++| .+|++++.+|.+|-.|
T Consensus 115 ~k~gI~~~~-----~~~~~~VvV~~~-~~~pLG~G~a~~s-------~~gkvv~n~~dvGeYL 164 (166)
T 2p38_A 115 PKEAVREIK-----WQGSKRVVVLND-LGDIIGIGLINPK-------SDRRFIKNLKDVGEFL 164 (166)
T ss_dssp CGGGEEEEE-----CSSCSEEEEECT-TSCEEEEEEECTT-------CSTTSEEEEEC-----
T ss_pred chhcceEEe-----ecCCCEEEEEEC-CCcEEEEEEEEEC-------CCCEEEEEcccceeee
Confidence 678888754 789999999998 8999999999998 7899999999988765
No 10
>1sqw_A Saccharomyces cerevisiae NIP7P homolog; PUA, unknown function; 1.90A {Homo sapiens} SCOP: b.122.1.1 d.17.6.3 PDB: 1t5y_A
Probab=98.06 E-value=1.7e-05 Score=51.46 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=45.5
Q ss_pred ceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCC-cceEEEEEEEeec
Q psy15688 3 PGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVN-KGIGVENFHYLND 61 (70)
Q Consensus 3 PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~-kG~av~v~h~~~D 61 (70)
-+|...++ ++++||.|.|+.. ++.|+|+|++..|++|+...+ .|++|...-=.|.
T Consensus 116 ~~V~~i~e---~i~~~~~VvV~n~-~d~pLG~G~a~~s~~e~~~~~~~~~vv~~q~D~Ge 171 (188)
T 1sqw_A 116 SGLGRITE---NTSQYQGVVVYSM-ADIPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGE 171 (188)
T ss_dssp GGEEEECT---TCCTTCEEEEEET-TCCEEEEEEESSCHHHHHHSCTTSEEEEEEEEGGG
T ss_pred HhhhhcCC---CCCCCCEEEEEeC-CCCEEEEEEeecCHHHHHhcCCCcEEEEEccccee
Confidence 45666666 8999999999998 899999999999999999876 7887776644443
No 11
>2aus_C Pseudouridine synthase; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_A 3lwo_A* 3lwq_A* 3lwp_A 3lwv_A 3hax_A* 2hvy_A* 3hay_A* 2ey4_A 2rfk_A 3mqk_A 3hjw_A* 3hjy_A
Probab=98.01 E-value=1.6e-05 Score=55.10 Aligned_cols=47 Identities=30% Similarity=0.490 Sum_probs=43.2
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeec
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLND 61 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D 61 (70)
+++.|+.|.|+.. ++.++|+|.+.||++|+...++|.++++.+++++
T Consensus 280 ~i~~gd~V~V~~~-~G~fLAIGe~~~s~~e~~~~~~G~~vKp~rV~~~ 326 (334)
T 2aus_C 280 GIKKGDLVAIMTL-KDELVALGKAMMSTQEMIERSKGIAVDVEKVFMP 326 (334)
T ss_dssp TCCTTCEEEEEET-TCCEEEEEEESSCHHHHHHCSSSEEEEEEEECSC
T ss_pred ccCCCCEEEEEec-CCeEEEEEEeccCchhccccCCCeEEEEEEEeeC
Confidence 5778999999987 7899999999999999999999999999999987
No 12
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=97.97 E-value=7.6e-06 Score=57.11 Aligned_cols=42 Identities=19% Similarity=0.388 Sum_probs=39.0
Q ss_pred CcceeecCCCCcCCCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhc
Q psy15688 1 MCPGLTSPGAIITPVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVR 46 (70)
Q Consensus 1 M~PGI~~~~~~~~~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~ 46 (70)
|.|||+..++ +|++||.|.|+.+ ++.++|.|.+.+|++|+.+
T Consensus 296 l~~Gi~~v~g---~F~~gd~V~i~~~-~g~~ia~G~~~y~s~e~~~ 337 (367)
T 2j5v_A 296 LPKGIKSVTG---NFSRGEVIRICNL-EGRDIAHGVSRYNSDALRR 337 (367)
T ss_dssp CGGGEEEEES---CCCTTCEEEEEET-TCCEEEEEECSSCHHHHHH
T ss_pred CCcccEEEEC---cccCCCEEEEECC-CCCEEEEEEecCCHHHHHH
Confidence 6799999988 9999999999998 8999999999999999864
No 13
>2apo_A Probable tRNA pseudouridine synthase B; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: b.122.1.1 d.265.1.2
Probab=97.88 E-value=3.5e-05 Score=53.97 Aligned_cols=47 Identities=28% Similarity=0.428 Sum_probs=43.2
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhcCCcceEEEEEEEeec
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVRVNKGIGVENFHYLND 61 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~~~kG~av~v~h~~~D 61 (70)
++..|+.|++++. ++.++|+|.+.|+++++...++|.++++.+++++
T Consensus 299 ~i~~gd~V~v~~~-~G~flAIGea~~~~~ei~~~~kG~vvKp~rVf~~ 345 (357)
T 2apo_A 299 GIGKGETVLVETL-KGEAVAVGKALMNTKEILNADKGVAVDVERVYMD 345 (357)
T ss_dssp TCCTTCEEEEECT-TSCEEEEEEESSCHHHHHHCSSSEEEEEEEECSC
T ss_pred ccCCCCeEEEEcC-CCEEEEEEEeccccccccccCCCeEEEEEEEeeC
Confidence 5778899999986 7899999999999999999899999999999987
No 14
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=55.15 E-value=11 Score=21.51 Aligned_cols=13 Identities=15% Similarity=0.488 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
.+++||+|+|...
T Consensus 35 ~l~~GdlVAVl~k 47 (92)
T 1ug1_A 35 SLLEGDLVGVIKK 47 (92)
T ss_dssp CCCTTCEEEEEES
T ss_pred eecCCCEEEEEec
Confidence 7999999999985
No 15
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=50.65 E-value=13 Score=22.04 Aligned_cols=16 Identities=13% Similarity=0.129 Sum_probs=13.5
Q ss_pred CcCCCCCCCEEEEEeC
Q psy15688 11 IITPVDKGTIVSIMAE 26 (70)
Q Consensus 11 ~~~~~~~G~~V~V~~~ 26 (70)
.+|+|+.||.|.|...
T Consensus 15 ~iP~f~~GDtv~V~~~ 30 (114)
T 3r8s_P 15 DVPSFRPGDTVEVKVW 30 (114)
T ss_dssp CCCCCCTTCEEEEEEE
T ss_pred CCCccCCCCEEEEEEE
Confidence 5689999999999763
No 16
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=48.45 E-value=27 Score=20.91 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=13.0
Q ss_pred CCCCCCCEEEEEeCC
Q psy15688 13 TPVDKGTIVSIMAEG 27 (70)
Q Consensus 13 ~~~~~G~~V~V~~~~ 27 (70)
-..++||.+.++..+
T Consensus 33 r~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 33 SRVKPGDKLVIYVRQ 47 (145)
T ss_dssp TTCCTTCEEEEEECC
T ss_pred HhCCCCCEEEEEEcc
Confidence 378999999999874
No 17
>2p1g_A Putative xylanase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Bacteroides fragilis}
Probab=46.63 E-value=36 Score=22.57 Aligned_cols=27 Identities=11% Similarity=0.308 Sum_probs=19.4
Q ss_pred CCCCCCCEEEEEeCCCC-cEEEEEEEec
Q psy15688 13 TPVDKGTIVSIMAEGKQ-HALAIGLTTL 39 (70)
Q Consensus 13 ~~~~~G~~V~V~~~~~~-~~vAVG~~~~ 39 (70)
..++.||+++|++...+ ..-=+|.+..
T Consensus 170 ~~l~~GDiI~i~t~~~GLDVsHvGi~i~ 197 (249)
T 2p1g_A 170 PWIKNGDIIALTTNTPGLDVSHMGIAIY 197 (249)
T ss_dssp TTSCTTCEEEEEECSTTCSEEEEEEEEE
T ss_pred hcCCCCCEEEEEeCCCCCceeEEEEEEE
Confidence 57999999999997543 3445666554
No 18
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=45.27 E-value=17 Score=22.47 Aligned_cols=16 Identities=13% Similarity=0.162 Sum_probs=13.5
Q ss_pred CcCCCCCCCEEEEEeC
Q psy15688 11 IITPVDKGTIVSIMAE 26 (70)
Q Consensus 11 ~~~~~~~G~~V~V~~~ 26 (70)
.+|+|+.||.|.|...
T Consensus 18 diP~F~~GDtV~V~~~ 33 (146)
T 3v2d_T 18 DLPEFRPGDTVRVSYK 33 (146)
T ss_dssp CCCCCCTTCEEEEEEE
T ss_pred cCCCcCCCCEEEEEEE
Confidence 5689999999999763
No 19
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=44.06 E-value=18 Score=22.20 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=28.6
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCHHHHhc----CCcceEEEEE
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLSTDDIVR----VNKGIGVENF 56 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e~~~----~~kG~av~v~ 56 (70)
..+.||.|.++-.+ ..|=.||++.+.++..-. ..+-.+|++.
T Consensus 42 ~Mk~GD~~ffYHS~-~~~gIvGi~eVv~e~ypD~t~~~prw~~VdV~ 87 (145)
T 2gbs_A 42 AMRRGDRAFYYHSN-EGKEIVGIAEIIREAYPDPTDASGKFVCVDIK 87 (145)
T ss_dssp HCCTTCEEEEEETT-TTCEEEEEEEEEEEEEECTTCTTSCSEEEEEE
T ss_pred hcCCCCEEEEEEeC-CCCceEEEEEEEEeccCCCCCCCCCEEEEEEE
Confidence 48999999999984 777788888876643211 1244466554
No 20
>2ftc_K 39S ribosomal protein L19, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=43.93 E-value=15 Score=21.09 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=12.6
Q ss_pred cCCCCCCCEEEEEeC
Q psy15688 12 ITPVDKGTIVSIMAE 26 (70)
Q Consensus 12 ~~~~~~G~~V~V~~~ 26 (70)
+|+|+.||.|.|...
T Consensus 1 iP~f~~GDtv~V~~~ 15 (98)
T 2ftc_K 1 IPEFYVGSILRVTTA 15 (98)
T ss_pred CCccCCCCEEEEEEE
Confidence 478999999999764
No 21
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=42.36 E-value=20 Score=22.17 Aligned_cols=29 Identities=7% Similarity=0.070 Sum_probs=23.5
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCHHH
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLSTDD 43 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss~e 43 (70)
..+.||.|.++-.+ ..|=.||++.+.++.
T Consensus 43 ~Mk~GD~~fFYHS~-~~~gIvGi~eVv~e~ 71 (155)
T 1zce_A 43 AMKIGDKGFFYHSN-EGLDVVGIVEVCALS 71 (155)
T ss_dssp TCCTTCEEEEEETT-TTCEEEEEEEEEEEE
T ss_pred hccCCCEEEEEEeC-CCCceEEEEEEeeec
Confidence 68999999999984 777788888876643
No 22
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=40.96 E-value=22 Score=22.09 Aligned_cols=28 Identities=7% Similarity=0.079 Sum_probs=22.0
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCH
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLST 41 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss 41 (70)
..+.||.|.++-.+-..|=.||++.+.+
T Consensus 40 ~Mk~GD~~ffYHS~c~~pgIvGi~eVv~ 67 (157)
T 2eve_A 40 TMAEGDEFFFYHSSCPEPGIAGIGKIVK 67 (157)
T ss_dssp HCCTTCEEEEEECSSSSCEEEEEEEEEE
T ss_pred hcCCCCEEEEEecCCCCCEEEEEEEEeE
Confidence 4789999999987426677788887765
No 23
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=40.83 E-value=17 Score=19.78 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=23.4
Q ss_pred EEEEEEecCHHHHhcCCcceEEEEEEEeeccc
Q psy15688 32 LAIGLTTLSTDDIVRVNKGIGVENFHYLNDGL 63 (70)
Q Consensus 32 vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~L 63 (70)
+-+|++.++-.|+.+.+.|-++..-+..+|.+
T Consensus 21 v~Lg~~~itl~ell~L~~GdVi~Ld~~~~e~v 52 (84)
T 1o9y_A 21 LRCGELRLTLAELRRLDAGTILEVTGISPGHA 52 (84)
T ss_dssp EEEEEEEEEHHHHHTCCTTCEEEECSSCTTEE
T ss_pred EEEecceeEHHHHhcCCCCCEEEeCCCCCCCE
Confidence 45788888888888888888887765444443
No 24
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=39.13 E-value=28 Score=16.82 Aligned_cols=14 Identities=14% Similarity=0.396 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 2bz8_A 19 TISVGEIITNIRKE 32 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eECCCCEEEEEEeC
Confidence 79999999998863
No 25
>3dcl_A TM1086; SAD, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.25A {Thermotoga maritima} PDB: 3n99_A
Probab=39.10 E-value=35 Score=23.14 Aligned_cols=45 Identities=27% Similarity=0.364 Sum_probs=32.8
Q ss_pred cCCCCCCCEEEEEeCCCCc--------EEEEEEEecCHHHHhcCCcceEEEEEEE
Q psy15688 12 ITPVDKGTIVSIMAEGKQH--------ALAIGLTTLSTDDIVRVNKGIGVENFHY 58 (70)
Q Consensus 12 ~~~~~~G~~V~V~~~~~~~--------~vAVG~~~~ss~e~~~~~kG~av~v~h~ 58 (70)
+.+++=||+|+|...+|.+ .+.||+..-| +-..+++|-.|.++=+
T Consensus 210 ld~LRfGD~Vai~D~Dn~yG~r~YrkGavsIGVVVHs--Dc~~aGHGPGvt~imT 262 (284)
T 3dcl_A 210 VADLKLGDIVAIQDHDNSYGVGKYRKGAVSIGVVVHS--ACVSAGHGPGVVVIMT 262 (284)
T ss_dssp SSCCBTTBEEEEEEEECSSSSCEEEEEEEEEEEECSC--CCCSTTCCSEEEEEEE
T ss_pred cccccccCEEEEeeccCCCCccccccCceEEEEEEeC--CccccCCCCceEEEEe
Confidence 4489999999999876632 6888988665 3344678888877644
No 26
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=39.08 E-value=30 Score=23.35 Aligned_cols=24 Identities=21% Similarity=0.274 Sum_probs=20.3
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEe
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTT 38 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~ 38 (70)
.++.|++|.|... ++.++++|...
T Consensus 33 ~~~~g~~v~v~~~-~g~~l~~G~~~ 56 (396)
T 3c0k_A 33 KASLGETIDIVDH-QGKWLARGAYS 56 (396)
T ss_dssp CCCTTCEEEEECT-TCCEEEEEEEC
T ss_pred CCCCCCEEEEEcC-CCCEEEEEEEC
Confidence 6899999999986 78889999653
No 27
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=38.12 E-value=29 Score=16.73 Aligned_cols=14 Identities=0% Similarity=-0.221 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 18 s~~~Gd~i~v~~~~ 31 (58)
T 1jo8_A 18 TFVENDKIINIEFV 31 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred ccCCCCEEEEEEec
Confidence 69999999998863
No 28
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=37.84 E-value=45 Score=18.43 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=23.6
Q ss_pred EEEEEEecCHHHHhcCCcceEEEEEEEeeccc
Q psy15688 32 LAIGLTTLSTDDIVRVNKGIGVENFHYLNDGL 63 (70)
Q Consensus 32 vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~L 63 (70)
+-+|.+.|+-.|+.+.+.|-++..-+..+|.+
T Consensus 25 ~~Lg~~~ltl~ell~L~~GdVI~Ld~~~~~~v 56 (96)
T 1o6a_A 25 VELGRTRMTLKRVLEMIHGSIIELDKLTGEPV 56 (96)
T ss_dssp EEEEEEEEEHHHHHHCCTTCEEEEEEETTCCE
T ss_pred EEEECcEeEHHHHhCCCCCCEEEeCCCCCCcE
Confidence 44788888888888888888887776655554
No 29
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=37.04 E-value=35 Score=20.41 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=18.9
Q ss_pred CCCCCCEEEEE-----eCCCCcEEEEEEEecCH
Q psy15688 14 PVDKGTIVSIM-----AEGKQHALAIGLTTLST 41 (70)
Q Consensus 14 ~~~~G~~V~V~-----~~~~~~~vAVG~~~~ss 41 (70)
..++||.+.++ -.+...+-.+|++.+.+
T Consensus 37 ~Mk~GD~~~fY~~~~~hs~~~~~~ivGi~eV~~ 69 (147)
T 2p5d_A 37 KVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVS 69 (147)
T ss_dssp TCCTTCEEEEEECCBCSTTCBCCEEEEEEEECS
T ss_pred hCCCCCEEEEEEecccCCCCCCCEEEEEEEEec
Confidence 78999999999 33223455566666654
No 30
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=36.91 E-value=31 Score=16.97 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 39 sf~~Gd~i~v~~~~ 52 (62)
T 1g2b_A 39 TMKKGDILTLLNST 52 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 68999999998763
No 31
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=36.47 E-value=49 Score=20.79 Aligned_cols=28 Identities=14% Similarity=0.192 Sum_probs=21.4
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCH
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLST 41 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss 41 (70)
..+.||.|.++-.+-..|=.||++.+.+
T Consensus 58 ~Mk~GD~vfFYHS~c~~pgIvGi~eVv~ 85 (172)
T 2ar1_A 58 AMSVGDKVLFYHSNTKEPGVAGLAEVVR 85 (172)
T ss_dssp HCCTTCEEEEEECSSSSCEEEEEEEEEE
T ss_pred hcCCCCEEEEEecCCCCCEEEEEEEEee
Confidence 5789999999988525677777777654
No 32
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=36.37 E-value=33 Score=16.45 Aligned_cols=14 Identities=7% Similarity=0.290 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 21 s~~~Gd~i~v~~~~ 34 (58)
T 2drm_A 21 TFKEGDTIIVHQKD 34 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998864
No 33
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=36.15 E-value=33 Score=16.48 Aligned_cols=14 Identities=14% Similarity=0.423 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 1uti_A 19 GFRSGEVVEVLDSS 32 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEEC
Confidence 79999999998763
No 34
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=36.00 E-value=32 Score=16.45 Aligned_cols=14 Identities=36% Similarity=0.601 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (57)
T 1cka_A 19 PFKKGDILRIRDKP 32 (57)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998763
No 35
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=34.86 E-value=34 Score=16.35 Aligned_cols=14 Identities=7% Similarity=0.577 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 20 s~~~Gd~i~v~~~~ 33 (58)
T 1sem_A 20 AFKRGDVITLINKD 33 (58)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998863
No 36
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=34.46 E-value=36 Score=16.63 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=12.6
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
+|++||++.|...++
T Consensus 24 s~~~Gd~i~v~~~~~ 38 (62)
T 2iim_A 24 GFEKGEQLRILEQSG 38 (62)
T ss_dssp CBCTTCEEEEEECCS
T ss_pred CCCCCCEEEEEEcCC
Confidence 699999999988643
No 37
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=34.35 E-value=36 Score=16.62 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (65)
T 2oaw_A 19 TMKKGDILTLLNST 32 (65)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEcC
Confidence 69999999998864
No 38
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=34.28 E-value=30 Score=16.43 Aligned_cols=14 Identities=21% Similarity=0.646 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 18 s~~~Gd~i~v~~~~ 31 (54)
T 2a28_A 18 SIDPGDIITVIRGD 31 (54)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEEEec
Confidence 69999999998864
No 39
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=34.06 E-value=37 Score=16.52 Aligned_cols=14 Identities=14% Similarity=0.256 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 21 s~~~Gd~i~v~~~~ 34 (61)
T 1y0m_A 21 TFTKSAIIQNVEKQ 34 (61)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCcCCCEEEEEEec
Confidence 79999999998863
No 40
>1te7_A Hypothetical UPF0267 protein YQFB; alpha + beta, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: b.122.1.7
Probab=33.89 E-value=63 Score=17.98 Aligned_cols=24 Identities=4% Similarity=-0.031 Sum_probs=18.1
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEE
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLT 37 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~ 37 (70)
..++||.+.|++...+.|+++-+.
T Consensus 32 ~~~~Gd~~~v~~~~~~~~~~~i~v 55 (103)
T 1te7_A 32 HFKTGDVLRVGRFEDDGYFCTIEV 55 (103)
T ss_dssp CCCTTSEEEEEETTTEEEEEEEEE
T ss_pred CCCCCCEEEEEECCCCcEEEEEEE
Confidence 578999999977667878665433
No 41
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=33.85 E-value=37 Score=16.61 Aligned_cols=14 Identities=7% Similarity=0.570 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 23 s~~~Gd~i~v~~~~ 36 (62)
T 1uj0_A 23 TFKHGELITVLDDS 36 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEeC
Confidence 69999999998863
No 42
>4h4j_A Hypothetical protein; PF07313 family protein, DUF 1460, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.15A {Bacteroides uniformis}
Probab=33.64 E-value=34 Score=22.37 Aligned_cols=31 Identities=13% Similarity=0.311 Sum_probs=22.0
Q ss_pred cCCCCCCCEEEEEeCCCCc-EEEEEEEecCHH
Q psy15688 12 ITPVDKGTIVSIMAEGKQH-ALAIGLTTLSTD 42 (70)
Q Consensus 12 ~~~~~~G~~V~V~~~~~~~-~vAVG~~~~ss~ 42 (70)
++.++.||+++|++..++- .-=+|.+....+
T Consensus 168 ~~~l~~GDiIai~t~~~GLDvsH~Giai~~~~ 199 (240)
T 4h4j_A 168 LPWIKDGDIIAITTNTPGLDVAHMGIAFYADN 199 (240)
T ss_dssp CTTSCTTCEEEEEECSTTCSEEEEEEEEEETT
T ss_pred HhhCCCCcEEEEEecCCCceEEEEEEEEEECC
Confidence 3579999999999986543 445777765433
No 43
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=33.59 E-value=37 Score=17.03 Aligned_cols=14 Identities=43% Similarity=0.494 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (65)
T 2nwm_A 19 TLQKGDIVYIHKEV 32 (65)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCcCCCEEEEEEec
Confidence 69999999998753
No 44
>3tu8_A Burkholderia lethal factor 1 (BLF1); toxin, unknown function; 1.04A {Burkholderia pseudomallei} PDB: 3tua_A
Probab=33.53 E-value=23 Score=22.09 Aligned_cols=30 Identities=27% Similarity=0.506 Sum_probs=21.9
Q ss_pred cCHHHHhcC---CcceEEEEEEEee--cccccccc
Q psy15688 39 LSTDDIVRV---NKGIGVENFHYLN--DGLWNMKN 68 (70)
Q Consensus 39 ~ss~e~~~~---~kG~av~v~h~~~--D~LW~~~~ 68 (70)
||++|-++. +.-+-|.-+|.-| |.||+++.
T Consensus 119 mssdewmedwevgtdrqvaylhragqsdslwnlsa 153 (210)
T 3tu8_A 119 MSSDEWMEDWEVGTDRQVAYLHRAGQSDSLWNLSA 153 (210)
T ss_dssp HTTSHHHHTSCTTCEEEEEEEEETTSCGGGTCCTT
T ss_pred hchhhhhhhhccccchhhHHHHhccCccchhhHHH
Confidence 677776553 4667778888876 79999863
No 45
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=33.20 E-value=39 Score=16.13 Aligned_cols=14 Identities=14% Similarity=0.472 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 20 s~~~Gd~i~v~~~~ 33 (58)
T 2vwf_A 20 GFRRGDFIHVMDNS 33 (58)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEcC
Confidence 69999999998763
No 46
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=33.19 E-value=30 Score=17.34 Aligned_cols=13 Identities=23% Similarity=0.475 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 28 sf~~Gd~i~v~~~ 40 (70)
T 1gcq_C 28 RLNPGDIVELTKA 40 (70)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CcCCCCEEEEEeC
Confidence 6999999999886
No 47
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=32.77 E-value=29 Score=17.77 Aligned_cols=13 Identities=31% Similarity=0.631 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (65)
T 2lj0_A 24 ELRDGDIVDVMEK 36 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEeEe
Confidence 7999999999764
No 48
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=32.46 E-value=47 Score=16.48 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2djq_A 25 KFNKGDVILLRRQ 37 (68)
T ss_dssp CCCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999876
No 49
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.17 E-value=48 Score=16.54 Aligned_cols=14 Identities=14% Similarity=0.574 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 2dl4_A 25 EMRPGDIITLLEDS 38 (68)
T ss_dssp CCCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEeC
Confidence 69999999998863
No 50
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=32.15 E-value=39 Score=16.90 Aligned_cols=14 Identities=36% Similarity=0.601 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 21 sf~~Gd~i~v~~~~ 34 (65)
T 1b07_A 21 PFKKGDILRIRDKP 34 (65)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCcCCCEEEEEEec
Confidence 69999999998863
No 51
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=31.39 E-value=32 Score=16.61 Aligned_cols=13 Identities=15% Similarity=0.432 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 22 s~~~Gd~i~v~~~ 34 (59)
T 2g6f_X 22 SFSKGDVIHVTRV 34 (59)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999874
No 52
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=31.06 E-value=41 Score=17.10 Aligned_cols=14 Identities=7% Similarity=0.261 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|...+
T Consensus 22 sf~~Gd~i~vl~~~ 35 (67)
T 2b86_A 22 DIKKNERLWLLDDS 35 (67)
T ss_dssp CBCTTCEEEEEECS
T ss_pred ccCCCCEEEEEecC
Confidence 69999999998863
No 53
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=31.02 E-value=33 Score=16.40 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 19 s~~~Gd~i~v~~~ 31 (58)
T 1zuy_A 19 PLKKGDVIYITRE 31 (58)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 54
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=30.90 E-value=31 Score=16.85 Aligned_cols=13 Identities=15% Similarity=0.552 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 23 s~~~Gd~i~v~~~ 35 (62)
T 1k4u_S 23 EFQEGDIILVLSK 35 (62)
T ss_dssp CBCSSCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999875
No 55
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=30.83 E-value=43 Score=17.00 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 17 s~~~Gd~i~v~~~~ 30 (73)
T 2kxd_A 17 TMKKGDILTLLNST 30 (73)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEcCCCEEEEEEec
Confidence 79999999998864
No 56
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=30.79 E-value=36 Score=16.45 Aligned_cols=13 Identities=31% Similarity=0.833 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 s~~~Gd~i~v~~~ 33 (60)
T 1oot_A 21 PFRKGDVITILKK 33 (60)
T ss_dssp CBCTTCEEEEEEC
T ss_pred eEcCCCEEEEEEe
Confidence 6999999999876
No 57
>2zjr_M 50S ribosomal protein L19; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.6 PDB: 1nwx_N* 1nwy_N* 1sm1_N* 1xbp_N* 2zjp_M* 2zjq_M 1nkw_N 3cf5_M* 3dll_M* 3pio_M* 3pip_M* 1pnu_N 1pny_N 1vor_Q 1vou_Q 1vow_Q 1voy_Q 1vp0_Q
Probab=30.74 E-value=26 Score=21.98 Aligned_cols=16 Identities=13% Similarity=0.223 Sum_probs=13.9
Q ss_pred CcCCCCCCCEEEEEeC
Q psy15688 11 IITPVDKGTIVSIMAE 26 (70)
Q Consensus 11 ~~~~~~~G~~V~V~~~ 26 (70)
.+|+|+.||.|.|...
T Consensus 23 diP~Fr~GDtV~V~vk 38 (166)
T 2zjr_M 23 QLPDFRPGDTVRVDTK 38 (166)
T ss_dssp CCCCCSSSEEEEEECC
T ss_pred CCCCcCCCCEEEEEEE
Confidence 4689999999999875
No 58
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=30.70 E-value=34 Score=17.59 Aligned_cols=13 Identities=23% Similarity=0.475 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 36 sf~~Gd~i~v~~~ 48 (78)
T 1k1z_A 36 RLNPGDIVELTKA 48 (78)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 6999999999886
No 59
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.68 E-value=51 Score=16.34 Aligned_cols=14 Identities=14% Similarity=0.273 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 1x2p_A 25 SFLRGEKILILRQT 38 (68)
T ss_dssp CCCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEcC
Confidence 69999999998863
No 60
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=30.33 E-value=46 Score=16.44 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 7 s~~~Gd~i~v~~~~ 20 (63)
T 1tuc_A 7 TMKKGDILTLLNST 20 (63)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 79999999998864
No 61
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=30.09 E-value=47 Score=15.90 Aligned_cols=13 Identities=23% Similarity=0.355 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 s~~~Gd~i~v~~~ 33 (58)
T 1zlm_A 21 YFEEGDIIYITDM 33 (58)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999876
No 62
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=29.24 E-value=39 Score=16.24 Aligned_cols=13 Identities=23% Similarity=0.488 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 20 s~~~Gd~i~v~~~ 32 (60)
T 2v1q_A 20 TIKSGDKVYILDD 32 (60)
T ss_dssp CBCTTCEEEEEES
T ss_pred cCCCCCEEEEEeC
Confidence 6999999999875
No 63
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=28.99 E-value=50 Score=16.12 Aligned_cols=14 Identities=14% Similarity=0.382 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 24 s~~~Gd~i~v~~~~ 37 (64)
T 2ak5_A 24 SFSKGDVIHVTRVE 37 (64)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEeEec
Confidence 69999999998753
No 64
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=28.77 E-value=24 Score=17.90 Aligned_cols=13 Identities=8% Similarity=0.409 Sum_probs=11.1
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 22 s~~~Gd~i~v~~~ 34 (60)
T 2lx7_A 22 RFAAGELITLLQV 34 (60)
T ss_dssp CCCTTCEEEBSCC
T ss_pred cCCCCCEEEEeEe
Confidence 6999999998764
No 65
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=28.68 E-value=47 Score=16.98 Aligned_cols=14 Identities=29% Similarity=0.627 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 29 s~~~Gd~i~v~~~~ 42 (73)
T 2ebp_A 29 KLKKGDIIDIISKP 42 (73)
T ss_dssp CBCSSCEEEEEECC
T ss_pred CCCCCCEEEEEEeC
Confidence 69999999998863
No 66
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=28.65 E-value=48 Score=17.15 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 20 s~~~Gd~i~v~~~~ 33 (80)
T 2pqh_A 20 TMKKGDILTLLNST 33 (80)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998863
No 67
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=28.59 E-value=38 Score=16.45 Aligned_cols=13 Identities=15% Similarity=0.296 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (60)
T 2gnc_A 24 SFKKGASLLLYHR 36 (60)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 68
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=28.24 E-value=50 Score=16.37 Aligned_cols=14 Identities=14% Similarity=0.375 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 20 s~~~Gd~i~v~~~~ 33 (67)
T 1gl5_A 20 RLERGQEYIILEKN 33 (67)
T ss_dssp CBCTTCEEEEEECS
T ss_pred cCCcCCEEEEEEcc
Confidence 69999999998863
No 69
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=28.17 E-value=41 Score=16.48 Aligned_cols=13 Identities=15% Similarity=0.567 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (64)
T 2jte_A 24 TFREGEIIHLISK 36 (64)
T ss_dssp CBCTTCEEEEEES
T ss_pred CCCCCCEEEEEEC
Confidence 7999999999875
No 70
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=28.14 E-value=57 Score=16.47 Aligned_cols=15 Identities=13% Similarity=0.315 Sum_probs=12.5
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
+|++||++.|...+.
T Consensus 25 s~~~Gd~i~v~~~~~ 39 (72)
T 2jw4_A 25 DIKKNERLWLLDDSK 39 (72)
T ss_dssp CCCTTCEEEEEECSS
T ss_pred cCCCCCEEEEEECCC
Confidence 699999999988643
No 71
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=28.08 E-value=39 Score=16.14 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=11.0
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 19 s~~~Gd~i~v~~~ 31 (59)
T 1yn8_A 19 RLAEGDIVFISYK 31 (59)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 6999999999764
No 72
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=28.04 E-value=72 Score=21.35 Aligned_cols=24 Identities=21% Similarity=0.400 Sum_probs=20.0
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEe
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTT 38 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~ 38 (70)
+++.|++|.|+.. ++.++++|.-.
T Consensus 32 ~~~~g~~v~v~~~-~g~~l~~G~~~ 55 (396)
T 2as0_A 32 DIKPGDIVEVYTR-GGKFLGKGFAN 55 (396)
T ss_dssp CCCTTCEEEEEET-TCCEEEEEEEC
T ss_pred CCCCCCEEEEEcC-CCCEEEEEEEC
Confidence 5789999999997 68889998663
No 73
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=27.94 E-value=40 Score=16.20 Aligned_cols=13 Identities=15% Similarity=0.386 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 20 s~~~Gd~i~v~~~ 32 (58)
T 1zx6_A 20 GLKPGDKVQLLEK 32 (58)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999875
No 74
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=27.80 E-value=39 Score=16.12 Aligned_cols=15 Identities=20% Similarity=0.441 Sum_probs=12.6
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
+|++||++.|....+
T Consensus 19 s~~~Gd~i~v~~~~~ 33 (58)
T 1zuu_A 19 TITPGDKISLVARDT 33 (58)
T ss_dssp CBCTTCCEEEEECCS
T ss_pred cCCCCCEEEEeEcCC
Confidence 699999999988643
No 75
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=27.75 E-value=55 Score=15.72 Aligned_cols=14 Identities=29% Similarity=0.608 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 24 s~~~Gd~i~v~~~~ 37 (62)
T 3ngp_A 24 TVKKGDILTLLNST 37 (62)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEeEec
Confidence 79999999998864
No 76
>3eop_A Thymocyte nuclear protein 1; unknown function, nucleus, phosphoprotein; 2.30A {Homo sapiens} SCOP: b.122.1.0
Probab=27.73 E-value=86 Score=19.78 Aligned_cols=28 Identities=11% Similarity=0.090 Sum_probs=22.0
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEEecCH
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLTTLST 41 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~~~ss 41 (70)
..+.||.|.++-.+-..|=.||++.+.+
T Consensus 51 ~Mk~GD~~fFYHSnck~pgIvGi~eVv~ 78 (176)
T 3eop_A 51 AMKLGEEAFFYHSNCKEPGIAGLMKIVK 78 (176)
T ss_dssp HCCTTCEEEEEECCSSSCEEEEEEEEEE
T ss_pred hcCCCCEEEEEecCCCCCeEEEEEEEee
Confidence 5789999999998536677788887654
No 77
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.68 E-value=60 Score=16.11 Aligned_cols=13 Identities=23% Similarity=0.355 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 1x2k_A 25 YFEEGDIIYITDM 37 (68)
T ss_dssp CCCSSCEEEEEEC
T ss_pred cCCCCCEEEEEEc
Confidence 6999999999875
No 78
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=27.57 E-value=55 Score=15.93 Aligned_cols=14 Identities=14% Similarity=0.157 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 27 s~~~Gd~i~v~~~~ 40 (65)
T 3ulr_B 27 SFDPDDIITNIEMI 40 (65)
T ss_dssp CBCTTCEEEEEECC
T ss_pred eEecCCEEEEEEec
Confidence 79999999998763
No 79
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=27.57 E-value=40 Score=16.82 Aligned_cols=13 Identities=23% Similarity=0.440 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 sf~~Gd~i~v~~~ 33 (67)
T 2bzy_A 21 ALEVGDIVKVTRM 33 (67)
T ss_dssp CBCTTCEEEEEEE
T ss_pred ccCCCCEEEEEEe
Confidence 7999999999775
No 80
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=27.56 E-value=53 Score=16.23 Aligned_cols=13 Identities=46% Similarity=0.787 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2dl3_A 25 PLQKGDIVYIYKQ 37 (68)
T ss_dssp CBCTTCEEEEEEC
T ss_pred cCCCCCEEEEeEe
Confidence 6999999999875
No 81
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=27.43 E-value=52 Score=16.42 Aligned_cols=14 Identities=7% Similarity=0.444 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|...+
T Consensus 26 s~~~Gd~i~v~~~~ 39 (68)
T 2k2m_A 26 SVKQRDVLEVLDDS 39 (68)
T ss_dssp CBCTTCEEEEEECS
T ss_pred cCCCCCEEEEEEcC
Confidence 69999999998864
No 82
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=27.35 E-value=41 Score=16.45 Aligned_cols=13 Identities=15% Similarity=0.365 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 19 s~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 19 TIRVGEIIRNVKK 31 (62)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCcCCCEEEEEEe
Confidence 6999999999775
No 83
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=27.35 E-value=40 Score=16.81 Aligned_cols=13 Identities=8% Similarity=0.143 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 sf~~Gd~i~v~~~ 37 (68)
T 1tg0_A 25 NFEKDQEIIVTSV 37 (68)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999874
No 84
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=27.20 E-value=32 Score=17.13 Aligned_cols=12 Identities=8% Similarity=0.609 Sum_probs=10.5
Q ss_pred CCCCCCEEEEEe
Q psy15688 14 PVDKGTIVSIMA 25 (70)
Q Consensus 14 ~~~~G~~V~V~~ 25 (70)
+|++||++.|..
T Consensus 26 sf~~Gd~i~v~~ 37 (67)
T 3rnj_A 26 SFKEGDLITLLV 37 (67)
T ss_dssp CBCTTCEEEECS
T ss_pred cCCCCCEEEEee
Confidence 699999999874
No 85
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=27.09 E-value=42 Score=16.24 Aligned_cols=13 Identities=23% Similarity=0.514 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 23 s~~~Gd~i~v~~~ 35 (60)
T 2xmf_A 23 SFNANDIIDIIKE 35 (60)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 86
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.98 E-value=54 Score=16.77 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 25 s~~~Gd~i~v~~~~ 38 (78)
T 2yuo_A 25 GFRKNDIITIISQK 38 (78)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cCCCCCEEEEEEec
Confidence 69999999998853
No 87
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=26.94 E-value=42 Score=16.27 Aligned_cols=13 Identities=8% Similarity=0.422 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 22 s~~~Gd~i~v~~~ 34 (60)
T 1w70_A 22 NFKAGDVIFLLSR 34 (60)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999875
No 88
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.91 E-value=54 Score=16.32 Aligned_cols=14 Identities=21% Similarity=0.556 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|...+
T Consensus 25 s~~~Gd~i~v~~~~ 38 (68)
T 1wxb_A 25 SVLKDEVLEVLEDG 38 (68)
T ss_dssp CBCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEcC
Confidence 69999999998864
No 89
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=26.78 E-value=42 Score=16.33 Aligned_cols=13 Identities=0% Similarity=0.031 Sum_probs=11.0
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 s~~~Gd~i~v~~~ 33 (62)
T 2fpe_A 21 ELEVDDPLLVELQ 33 (62)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999654
No 90
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=26.76 E-value=45 Score=16.63 Aligned_cols=14 Identities=21% Similarity=0.591 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 21 s~~~Gd~i~v~~~~ 34 (69)
T 1wyx_A 21 SFRKGDIMTVLEQD 34 (69)
T ss_dssp CBCTTCEEEEEETT
T ss_pred CCcCCCEEEEeECC
Confidence 79999999998863
No 91
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.52 E-value=64 Score=16.65 Aligned_cols=14 Identities=7% Similarity=0.463 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 28 s~~~Gd~i~v~~~~ 41 (81)
T 2ysq_A 28 AFKAGDVIKVLDAS 41 (81)
T ss_dssp CCCTTCEEEEEECC
T ss_pred CCCCCCEEEEEEEc
Confidence 69999999998863
No 92
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=26.44 E-value=34 Score=16.51 Aligned_cols=13 Identities=15% Similarity=0.325 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 s~~~Gd~i~v~~~ 33 (60)
T 2x3w_D 21 SFKAGDELTKLGE 33 (60)
T ss_dssp CBCTTCEEEECSC
T ss_pred cCCCCCEEEEEEc
Confidence 6999999999765
No 93
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=26.41 E-value=43 Score=16.52 Aligned_cols=13 Identities=23% Similarity=0.314 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (65)
T 2j05_A 24 SFLKGDMFIVHNE 36 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEeEe
Confidence 6999999999764
No 94
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=26.37 E-value=44 Score=15.83 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 19 s~~~Gd~i~v~~~~ 32 (58)
T 4e6r_A 19 SLVXGSRVTVMEXC 32 (58)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred eEeCCCEEEEeEcC
Confidence 79999999998753
No 95
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.20 E-value=58 Score=16.94 Aligned_cols=14 Identities=29% Similarity=0.541 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 35 sf~~Gd~i~v~~~~ 48 (81)
T 1x6g_A 35 AFRKGDVVTILEAC 48 (81)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEecc
Confidence 69999999998753
No 96
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=25.99 E-value=57 Score=16.95 Aligned_cols=14 Identities=21% Similarity=0.380 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 23 s~~~Gd~i~vl~~~ 36 (79)
T 3cqt_A 23 SFHKGEKFQILNSS 36 (79)
T ss_dssp CBCTTCEEEEEECT
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998753
No 97
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=25.98 E-value=44 Score=16.91 Aligned_cols=13 Identities=15% Similarity=0.488 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 sf~~Gd~i~v~~~ 33 (68)
T 2ew3_A 21 GFKEGDIITLTNQ 33 (68)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 98
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=25.92 E-value=37 Score=18.96 Aligned_cols=32 Identities=9% Similarity=0.186 Sum_probs=20.2
Q ss_pred EEEEEEecCHHHHhcCCcceEEEEEEEeeccc
Q psy15688 32 LAIGLTTLSTDDIVRVNKGIGVENFHYLNDGL 63 (70)
Q Consensus 32 vAVG~~~~ss~e~~~~~kG~av~v~h~~~D~L 63 (70)
+-+|++.++-.|+.+.+.|-++..-+..+|.+
T Consensus 25 ~~LG~~~itl~ell~L~~GdVI~Ld~~~~~~v 56 (96)
T 3uep_A 25 FEVGRQILDWHTLTSLEPGSLIDLTTPVDGEV 56 (96)
T ss_dssp EEESCCEEEHHHHHHCCTTCEEEEEEESSCEE
T ss_pred EEEeceeeeHHHHhcCCCCCEEEeCCCCCCcE
Confidence 33666667777777767777776666554443
No 99
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=25.91 E-value=44 Score=16.54 Aligned_cols=13 Identities=15% Similarity=0.483 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (67)
T 2o9s_A 24 SFRKGERITLLRQ 36 (67)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 100
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=25.89 E-value=45 Score=16.33 Aligned_cols=14 Identities=21% Similarity=0.439 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 25 s~~~Gd~i~v~~~~ 38 (65)
T 1w1f_A 25 SFKKGEKMKVLEEH 38 (65)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEcC
Confidence 69999999998753
No 101
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.87 E-value=41 Score=16.80 Aligned_cols=13 Identities=23% Similarity=0.667 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (71)
T 2cre_A 25 AFSRGDILTILEQ 37 (71)
T ss_dssp CCCSSCCEEEEES
T ss_pred CCCCCCEEEEeEc
Confidence 6999999999886
No 102
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=25.75 E-value=47 Score=16.88 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 20 s~~~Gd~i~vl~~ 32 (69)
T 2ydl_A 20 TIKEGDIVTLINK 32 (69)
T ss_dssp CBCTTCEEEEEES
T ss_pred ccCCCCEEEEEEc
Confidence 7999999999886
No 103
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=25.73 E-value=67 Score=15.63 Aligned_cols=16 Identities=13% Similarity=0.447 Sum_probs=13.2
Q ss_pred CCCCCCEEEEEeCCCC
Q psy15688 14 PVDKGTIVSIMAEGKQ 29 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~ 29 (70)
+++.||.|.+...+++
T Consensus 25 gi~~Gd~v~i~~~~~~ 40 (53)
T 2l66_A 25 QIKEGDLVKVTFDESE 40 (53)
T ss_dssp CCCTTCEEEEEECSSS
T ss_pred CcCCCCEEEEEEECCE
Confidence 7899999999987543
No 104
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=25.52 E-value=52 Score=16.47 Aligned_cols=13 Identities=8% Similarity=0.250 Sum_probs=11.1
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 sf~~Gd~i~v~~~ 37 (70)
T 2vkn_A 25 SFEQNEILQVSDI 37 (70)
T ss_dssp CBCTTCEEEEECT
T ss_pred cCCCCCEEEEEEc
Confidence 6999999998765
No 105
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.50 E-value=51 Score=16.92 Aligned_cols=13 Identities=15% Similarity=0.496 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||+|.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (80)
T 1ue9_A 25 SLAPGQLILILKK 37 (80)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 106
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=25.47 E-value=60 Score=16.15 Aligned_cols=15 Identities=20% Similarity=0.403 Sum_probs=12.6
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
+|++||++.|...++
T Consensus 25 s~~~Gd~i~v~~~~~ 39 (68)
T 1wxt_A 25 TVVQGEKLEVLDHSK 39 (68)
T ss_dssp CBCTTCEEEEEECSS
T ss_pred CCCCCCEEEEEEcCC
Confidence 699999999988643
No 107
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.27 E-value=62 Score=16.09 Aligned_cols=14 Identities=29% Similarity=0.487 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 25 s~~~Gd~i~vl~~~ 38 (70)
T 2ct4_A 25 SMAEGEDLSLMEED 38 (70)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEecc
Confidence 69999999998764
No 108
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=25.26 E-value=63 Score=16.04 Aligned_cols=13 Identities=23% Similarity=0.560 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 26 s~~~Gd~i~v~~~ 38 (69)
T 2dil_A 26 DLSAGDILEVILE 38 (69)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 6999999999886
No 109
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=25.03 E-value=48 Score=16.08 Aligned_cols=13 Identities=31% Similarity=0.506 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (65)
T 3u23_A 25 ELKVGDIIDINEE 37 (65)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 7999999999864
No 110
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=25.00 E-value=47 Score=16.55 Aligned_cols=13 Identities=46% Similarity=0.744 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 21 s~~~Gd~i~v~~~ 33 (69)
T 1ruw_A 21 PLKKGDIVFISRD 33 (69)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999875
No 111
>2im9_A Hypothetical protein; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.67A {Legionella pneumophila subsp} SCOP: d.3.1.13
Probab=24.93 E-value=77 Score=21.87 Aligned_cols=43 Identities=12% Similarity=0.299 Sum_probs=25.9
Q ss_pred CCCCCCCEEEEEeC---------CCCcEEEEEEEecCHHHHh----cCCcceEEEE
Q psy15688 13 TPVDKGTIVSIMAE---------GKQHALAIGLTTLSTDDIV----RVNKGIGVEN 55 (70)
Q Consensus 13 ~~~~~G~~V~V~~~---------~~~~~vAVG~~~~ss~e~~----~~~kG~av~v 55 (70)
..++.||+++|++. ..-..-=+|.+......+. .+.+|++|..
T Consensus 239 ~~I~~GDII~I~t~~~~l~~~ig~GLDVsHvGiai~~~g~l~lrhASS~~~kVVd~ 294 (333)
T 2im9_A 239 SQIPNGAVIEIIRPNWDLRQQIGTELDISHLGFAIWINNELFFRQASSQYGKVVDV 294 (333)
T ss_dssp TTSCTTCEEEEEEEEECCHHHHSSCEEEEEEEEEEEETTEEEEEEEETTTTEEEEE
T ss_pred hhCCCCCEEEEEecCccccccccCCCcceEEEEEEEECCeEEEEecCCCCCeEEec
Confidence 47999999999995 1233445777766543321 1235566643
No 112
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=24.85 E-value=51 Score=16.60 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 27 s~~~Gd~i~v~~~ 39 (73)
T 2k9g_A 27 TIKEGDIVTLINK 39 (73)
T ss_dssp CBCTTCEEEEEEC
T ss_pred eECCCCEEEEEEC
Confidence 6999999999876
No 113
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=24.76 E-value=64 Score=16.10 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 23 s~~~Gd~i~v~~~~ 36 (73)
T 3thk_A 23 TMKKGDILTLLNST 36 (73)
T ss_dssp CBCTTCEEEEEECC
T ss_pred CCCCCCEEEEEECC
Confidence 79999999998863
No 114
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.50 E-value=52 Score=16.60 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=11.6
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 26 sf~~Gd~i~v~~~ 38 (73)
T 2dl7_A 26 SFPEGAIIRILNK 38 (73)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 6999999999875
No 115
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.25 E-value=50 Score=16.90 Aligned_cols=14 Identities=21% Similarity=0.396 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 32 sf~~Gd~i~v~~~~ 45 (76)
T 2csi_A 32 TFCTGDIITVFGEI 45 (76)
T ss_dssp CCCTTCEEEEESSC
T ss_pred cCCCCCEEEEeEec
Confidence 69999999998763
No 116
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.23 E-value=65 Score=16.48 Aligned_cols=13 Identities=38% Similarity=0.588 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (79)
T 2yun_A 25 NLEKGDIVIIHEK 37 (79)
T ss_dssp CBCTTCEEEEEEC
T ss_pred CCCCCCEEEEEEc
Confidence 6999999999875
No 117
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=24.14 E-value=64 Score=17.11 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=12.2
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 35 sf~~Gd~i~Vl~~~ 48 (83)
T 1neg_A 35 TMKKGDILTLLNST 48 (83)
T ss_dssp CBCTTCEEEEEECC
T ss_pred ccCCCCEEEEEEec
Confidence 69999999998863
No 118
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.09 E-value=72 Score=16.76 Aligned_cols=13 Identities=15% Similarity=0.549 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 sf~~Gd~i~v~~~ 47 (88)
T 1x2q_A 35 TFKHGEIIIVLDD 47 (88)
T ss_dssp CCCSSCEEEEEEC
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 119
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=24.07 E-value=47 Score=16.59 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (70)
T 2da9_A 25 TIKEGDIVTLINK 37 (70)
T ss_dssp CCCTTEEEEEEEC
T ss_pred eEcCCCEEEEEEC
Confidence 7999999999876
No 120
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=23.93 E-value=37 Score=17.00 Aligned_cols=13 Identities=15% Similarity=0.394 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 26 s~~~Gd~i~v~~~ 38 (67)
T 2eyx_A 26 ALEVGELVKVTKI 38 (67)
T ss_dssp CBCSSEEEEEEEE
T ss_pred ccCCCCEEEEEEe
Confidence 6999999999765
No 121
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=23.83 E-value=40 Score=16.72 Aligned_cols=12 Identities=8% Similarity=0.578 Sum_probs=10.8
Q ss_pred CCCCCCEEEEEe
Q psy15688 14 PVDKGTIVSIMA 25 (70)
Q Consensus 14 ~~~~G~~V~V~~ 25 (70)
+|++||++.|..
T Consensus 25 s~~~Gd~i~v~~ 36 (67)
T 2kxc_A 25 SFAQGDVITLLI 36 (67)
T ss_dssp CBCTTCEEEESS
T ss_pred cCCCCCEEEEeE
Confidence 699999999986
No 122
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.77 E-value=46 Score=16.60 Aligned_cols=13 Identities=31% Similarity=0.462 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (68)
T 2dmo_A 25 QVMPGNIVFVLKK 37 (68)
T ss_dssp CCCTTCEEEECEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999764
No 123
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=23.76 E-value=46 Score=16.74 Aligned_cols=13 Identities=0% Similarity=0.031 Sum_probs=11.1
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (71)
T 2fpf_A 24 ELEVDDPLLVELQ 36 (71)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCcCCcEEEEeEe
Confidence 6999999999754
No 124
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=23.68 E-value=49 Score=16.52 Aligned_cols=13 Identities=15% Similarity=0.503 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (71)
T 1u5s_A 24 NFEKGETMEVIEK 36 (71)
T ss_dssp CCCSSCCEEEEEC
T ss_pred cCCCCCEEEEEEC
Confidence 6999999999886
No 125
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.64 E-value=45 Score=17.07 Aligned_cols=13 Identities=15% Similarity=0.411 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 32 sf~~Gd~i~v~~~ 44 (75)
T 2ege_A 32 ALRAGDVVMVYGP 44 (75)
T ss_dssp CBCTTCEEEEESC
T ss_pred eECCCCEEEEeEc
Confidence 6999999999863
No 126
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=23.63 E-value=53 Score=15.83 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=11.0
Q ss_pred CCCCCCEEEEEe
Q psy15688 14 PVDKGTIVSIMA 25 (70)
Q Consensus 14 ~~~~G~~V~V~~ 25 (70)
+|++||++.|..
T Consensus 23 s~~~Gd~i~v~~ 34 (63)
T 3eg3_A 23 SITKGEKLRVLG 34 (63)
T ss_dssp CBCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 799999999987
No 127
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=23.54 E-value=52 Score=16.38 Aligned_cols=13 Identities=23% Similarity=0.488 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (71)
T 2jt4_A 24 TIKSGDKVYILDD 36 (71)
T ss_dssp CBCTTCEEEEEES
T ss_pred cCCCCCEEEEEEC
Confidence 6999999999886
No 128
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=23.44 E-value=52 Score=16.46 Aligned_cols=12 Identities=42% Similarity=0.797 Sum_probs=11.0
Q ss_pred CCCCCCEEEEEe
Q psy15688 14 PVDKGTIVSIMA 25 (70)
Q Consensus 14 ~~~~G~~V~V~~ 25 (70)
+|++||++.|..
T Consensus 29 s~~~Gd~i~v~~ 40 (71)
T 1csk_A 29 PFCKGDVLTIVA 40 (71)
T ss_dssp CBCTTCEEEEEE
T ss_pred CCCCCCEEEEeE
Confidence 699999999987
No 129
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.36 E-value=55 Score=16.57 Aligned_cols=13 Identities=8% Similarity=0.304 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (77)
T 2d8j_A 25 SFRAGDKLQVLDT 37 (77)
T ss_dssp CBCTTCCEEEEEC
T ss_pred CCCCCCEEEEEEC
Confidence 6999999999886
No 130
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=23.28 E-value=52 Score=16.86 Aligned_cols=14 Identities=21% Similarity=0.617 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 33 s~~~Gd~i~v~~~~ 46 (80)
T 2v1r_A 33 ALKKGDLMAILSKK 46 (80)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred cCCCCCEEEEEECC
Confidence 69999999998753
No 131
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=23.10 E-value=70 Score=15.95 Aligned_cols=14 Identities=21% Similarity=0.380 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 33 s~~~Gd~i~v~~~~ 46 (73)
T 3h0h_A 33 SFHKGEKFQILNSS 46 (73)
T ss_dssp CBCTTCEEEEEECS
T ss_pred eEeCCCEEEEEEec
Confidence 79999999998753
No 132
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=22.98 E-value=54 Score=16.60 Aligned_cols=13 Identities=8% Similarity=0.437 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 31 s~~~Gd~i~v~~~ 43 (73)
T 3c0c_A 31 GFREGDLITLTNQ 43 (73)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCcCCCEEEEEEe
Confidence 6999999999875
No 133
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=22.92 E-value=65 Score=16.35 Aligned_cols=14 Identities=21% Similarity=0.522 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 28 s~~~Gd~i~v~~~~ 41 (77)
T 2enm_A 28 TVTEGEIITVTNPN 41 (77)
T ss_dssp CCCTTCEEEEEESC
T ss_pred cCCCCCEEEEeEcc
Confidence 69999999998863
No 134
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=22.87 E-value=43 Score=16.17 Aligned_cols=13 Identities=23% Similarity=0.473 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 19 s~~~Gd~i~v~~~ 31 (60)
T 1i07_A 19 SVMKDDVLEILDD 31 (60)
T ss_dssp CBCTTCEEEECGG
T ss_pred cCCCCCEEEEEEc
Confidence 6999999999765
No 135
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=22.83 E-value=54 Score=16.79 Aligned_cols=13 Identities=31% Similarity=0.376 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 23 s~~~Gd~i~v~~~ 35 (73)
T 2lcs_A 23 RLAEGDIVFISYK 35 (73)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCcCCCEEEEEEE
Confidence 6999999999764
No 136
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=22.81 E-value=55 Score=16.23 Aligned_cols=13 Identities=15% Similarity=0.455 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 25 s~~~Gd~i~v~~~ 37 (70)
T 2cuc_A 25 DLQKGEGIRVLGK 37 (70)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999875
No 137
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=22.61 E-value=56 Score=16.20 Aligned_cols=14 Identities=14% Similarity=0.560 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 24 s~~~Gd~i~v~~~~ 37 (69)
T 4esr_A 24 TIHRGDIIRVFFKD 37 (69)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CCCCCCEEEEEEec
Confidence 79999999998753
No 138
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.55 E-value=55 Score=16.49 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 27 s~~~Gd~i~v~~~ 39 (72)
T 2dl8_A 27 SFKKGASLLLYQR 39 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred ccCCCCEEEEEee
Confidence 6999999999774
No 139
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=22.54 E-value=57 Score=15.71 Aligned_cols=13 Identities=8% Similarity=0.176 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 24 s~~~Gd~i~v~~~ 36 (64)
T 4f14_A 24 SFRDGDYIVNVQP 36 (64)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 7999999988765
No 140
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=22.45 E-value=56 Score=17.64 Aligned_cols=14 Identities=14% Similarity=0.439 Sum_probs=11.9
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
.+++||+|.|...+
T Consensus 25 ~lk~Gd~VeVl~k~ 38 (71)
T 1v1c_A 25 TLREGQYVEVLDAA 38 (71)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred eecCCCEEEEEEcC
Confidence 58999999998763
No 141
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=22.38 E-value=71 Score=16.24 Aligned_cols=15 Identities=7% Similarity=0.233 Sum_probs=12.6
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
++++||.|.+...++
T Consensus 35 gi~~Gd~l~i~~~~~ 49 (59)
T 1yfb_A 35 GIAEKDALEIYVDDE 49 (59)
T ss_dssp TCCTTCEEEEEEETT
T ss_pred CCCCCCEEEEEEECC
Confidence 789999999988743
No 142
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=22.34 E-value=49 Score=16.90 Aligned_cols=13 Identities=15% Similarity=0.388 Sum_probs=11.3
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 28 sf~~Gd~i~v~~~ 40 (76)
T 2ed1_A 28 TFIEGEVIIVTGE 40 (76)
T ss_dssp CCCSSCEEEESSC
T ss_pred CcCCCCEEEEEEe
Confidence 6999999999764
No 143
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=22.21 E-value=44 Score=16.79 Aligned_cols=13 Identities=8% Similarity=0.488 Sum_probs=11.1
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 26 s~~~Gd~i~v~~~ 38 (72)
T 1spk_A 26 SFAQGDVLTLLIP 38 (72)
T ss_dssp CBCTTCEEEECCS
T ss_pred cCCCCCEEEEeEc
Confidence 6999999999753
No 144
>3tee_A Flagella basal BODY P-ring formation protein FLGA; chaperone, flagellar P-ring formation, flagellar FLGI protei periplasmic protein; 1.95A {Salmonella typhimurium}
Probab=22.16 E-value=1.6e+02 Score=18.68 Aligned_cols=27 Identities=26% Similarity=0.318 Sum_probs=20.9
Q ss_pred CCCCCCEEEEEeCCCC-cEEEEEEEecC
Q psy15688 14 PVDKGTIVSIMAEGKQ-HALAIGLTTLS 40 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~-~~vAVG~~~~s 40 (70)
-+++||.|.|...+.+ ..-+-|+|+-+
T Consensus 140 lV~rG~~V~i~~~~~g~~i~~~G~AL~~ 167 (219)
T 3tee_A 140 RVKAGQRVQVIANGEGFSVNAEGQAMNN 167 (219)
T ss_dssp SBCTTCEEEEEEECSSCEEEEEEEECSC
T ss_pred EEcCCCEEEEEEecCCEEEEEEEEEccc
Confidence 6899999999887644 46677888654
No 145
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.11 E-value=59 Score=16.69 Aligned_cols=14 Identities=14% Similarity=0.143 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||+|.|....
T Consensus 31 s~~~Gd~i~vl~~~ 44 (79)
T 1uhc_A 31 SVSANQKLKILEFK 44 (79)
T ss_dssp CBCTTCEEEEEESC
T ss_pred CCCCCCEEEEEECC
Confidence 69999999998853
No 146
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=22.09 E-value=65 Score=16.95 Aligned_cols=14 Identities=7% Similarity=0.261 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|...+
T Consensus 49 s~~~Gd~i~v~~~~ 62 (86)
T 2jxb_A 49 DIKKNERLWLLDDS 62 (86)
T ss_dssp CCCTTEEEEEEECC
T ss_pred ccCCCCEEEEEecC
Confidence 69999999998863
No 147
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=21.80 E-value=41 Score=17.47 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 28 sf~~Gd~i~v~~~~ 41 (80)
T 2i0n_A 28 PFKRNDIITITFKD 41 (80)
T ss_dssp CBCSSEEEEEEEES
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998753
No 148
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.79 E-value=63 Score=16.68 Aligned_cols=13 Identities=0% Similarity=0.243 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 s~~~Gd~i~v~~~ 47 (81)
T 1x43_A 35 SLLADEVITVFSV 47 (81)
T ss_dssp CCCTTCEEEEECC
T ss_pred CCCCCCEEEEEEc
Confidence 6999999999876
No 149
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=21.70 E-value=71 Score=16.82 Aligned_cols=13 Identities=15% Similarity=0.503 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 s~~~Gd~i~v~~~ 47 (91)
T 1wx6_A 35 NFEKGETMEVIEK 47 (91)
T ss_dssp CCCTTCEEEEEEC
T ss_pred cCCCCCEEEEEEC
Confidence 6999999999886
No 150
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=21.52 E-value=39 Score=16.97 Aligned_cols=13 Identities=31% Similarity=0.506 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 19 s~~~Gd~i~v~~~ 31 (65)
T 2fei_A 19 ELKVGDIIDINEE 31 (65)
T ss_dssp CCCTTCEEECCCC
T ss_pred CCCCCCEEEEEEe
Confidence 7999999999765
No 151
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.45 E-value=58 Score=17.19 Aligned_cols=13 Identities=23% Similarity=0.440 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 36 sf~~Gd~i~v~~~ 48 (88)
T 2dbk_A 36 ALEVGDIVKVTRM 48 (88)
T ss_dssp CBCTTCEEEEEEE
T ss_pred cCCCCCEEEEEEe
Confidence 6999999999775
No 152
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=21.41 E-value=60 Score=16.74 Aligned_cols=13 Identities=15% Similarity=0.608 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 sf~~Gd~i~Vl~~ 47 (72)
T 2l0a_A 35 TFKAGEIITVLDD 47 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEe
Confidence 6999999999764
No 153
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.39 E-value=58 Score=16.74 Aligned_cols=13 Identities=15% Similarity=0.549 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 sf~~Gd~i~v~~~ 47 (78)
T 2ed0_A 35 SFQEGAIIYVIKK 47 (78)
T ss_dssp CBCSSCEEEEEEE
T ss_pred cccCCCEEEEEEe
Confidence 6999999999875
No 154
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=21.28 E-value=30 Score=20.87 Aligned_cols=27 Identities=4% Similarity=0.201 Sum_probs=20.2
Q ss_pred EEEEEeCCCCc-EEEEEEEecCHHHHhc
Q psy15688 20 IVSIMAEGKQH-ALAIGLTTLSTDDIVR 46 (70)
Q Consensus 20 ~V~V~~~~~~~-~vAVG~~~~ss~e~~~ 46 (70)
-|-.+..+.+. -++||.+.|+.++|.+
T Consensus 69 ~v~fr~dk~~~ih~~VGk~sf~~e~L~e 96 (137)
T 2ov7_A 69 RIEFRNDKTGAIHAPVGKASFPPEKLAD 96 (137)
T ss_dssp EEEEECCTTSEEEEEEEETTSCHHHHHH
T ss_pred eEEEEECCCCEEEEEEecCCCCHHHHHH
Confidence 37777764443 5899999999999854
No 155
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=21.22 E-value=62 Score=16.04 Aligned_cols=13 Identities=23% Similarity=0.434 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 31 s~~~Gd~i~v~~~ 43 (72)
T 4glm_A 31 DFEVGDKIRILAT 43 (72)
T ss_dssp CBCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 7999999999874
No 156
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.18 E-value=70 Score=16.40 Aligned_cols=13 Identities=15% Similarity=0.284 Sum_probs=11.4
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 35 s~~~Gd~i~v~~~ 47 (79)
T 1x69_A 35 SFDPDDIITNIEM 47 (79)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CcCCCCEEEEeEe
Confidence 6999999999875
No 157
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=21.15 E-value=47 Score=17.61 Aligned_cols=14 Identities=14% Similarity=0.532 Sum_probs=11.7
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 37 sf~~GDiI~V~~~~ 50 (83)
T 2ke9_A 37 NVRAGDVITVLEQH 50 (83)
T ss_dssp CBCTTCEEEESCSS
T ss_pred cccCCCEEEEEEec
Confidence 69999999997653
No 158
>1y08_A Hypothetical protein SPY0861; cysteine proteinase, papain-like fold with major insertions, hydrolase; 1.93A {Streptococcus pyogenes} SCOP: d.3.1.12 PDB: 2avw_A 2au1_A
Probab=21.06 E-value=58 Score=22.47 Aligned_cols=51 Identities=20% Similarity=0.349 Sum_probs=33.4
Q ss_pred CCCCEEEEEeCCC---------CcEEEE---EEEecCHHHHhcCCcceEEEEEE--Eeecccccc
Q psy15688 16 DKGTIVSIMAEGK---------QHALAI---GLTTLSTDDIVRVNKGIGVENFH--YLNDGLWNM 66 (70)
Q Consensus 16 ~~G~~V~V~~~~~---------~~~vAV---G~~~~ss~e~~~~~kG~av~v~h--~~~D~LW~~ 66 (70)
..|.+++|+..++ ..+|.+ |.....+..+.....|--|+=+| .+|-++|+-
T Consensus 257 e~Gnl~aIYvTDSDD~~~vGmKRY~V~~~~~g~~~~~~~~~~~~~~ga~v~~l~tl~~g~~~w~~ 321 (323)
T 1y08_A 257 SNGNLKAIYVTDSDSNASIGMKKYFVGVNSAGKVAISAKEIKEDNIGAQVLGLFTLSTGQDSWNQ 321 (323)
T ss_dssp TTSCEEEEEEECTTSCTTTCEEEEEEEECTTSCEEEESSCCBTTBCCEEEEEEEEECCCTTSCCT
T ss_pred CCCCEEEEEEecCCCccccceEEEEEEeccCCceEecccccCcccccceeeeEEEEehhhhhhhh
Confidence 3789999987553 235544 44555555555556888888888 456778863
No 159
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=21.01 E-value=70 Score=16.57 Aligned_cols=14 Identities=21% Similarity=0.472 Sum_probs=12.0
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 43 s~~~Gd~i~v~~~~ 56 (86)
T 2oi3_A 43 SFQKGDQMVVLEES 56 (86)
T ss_dssp CCCTTCEEEEEEES
T ss_pred cCCCCCEEEEEEcC
Confidence 69999999998764
No 160
>2jv2_A Putative uncharacterized protein PH1500; AAA ATPase NC-domain-like, unknown function; NMR {Pyrococcus horikoshii}
Probab=20.67 E-value=69 Score=17.48 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=17.6
Q ss_pred CCCCCCEEEEEeCCCCcEEEEEEE
Q psy15688 14 PVDKGTIVSIMAEGKQHALAIGLT 37 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~~~vAVG~~ 37 (70)
.+.+||.+.|...++..+|.|-.+
T Consensus 41 PV~~GD~I~i~~~G~~i~F~Vv~t 64 (83)
T 2jv2_A 41 TVRTGDVIGISILGKEVKFKVVQA 64 (83)
T ss_dssp EECTTCEEEEEETTEEEEEEEEEE
T ss_pred CccCCCEEEEeeCCCEEEEEEEEe
Confidence 478999999987765656655543
No 161
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=20.67 E-value=61 Score=17.12 Aligned_cols=14 Identities=21% Similarity=0.617 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 33 sf~~Gd~i~v~~~~ 46 (92)
T 1jqq_A 33 ALKKGDLMAILSKK 46 (92)
T ss_dssp CBCTTCEEEEEEEE
T ss_pred CCCCCCEEEEEECC
Confidence 69999999998753
No 162
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.59 E-value=64 Score=16.85 Aligned_cols=14 Identities=0% Similarity=0.169 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 37 s~~~Gd~i~v~~~~ 50 (85)
T 2yuq_A 37 ALRRNEEYCLLDSS 50 (85)
T ss_dssp CCCBTEEEEEEECC
T ss_pred CCCCCCEEEEEEec
Confidence 69999999998864
No 163
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=20.45 E-value=47 Score=17.10 Aligned_cols=13 Identities=23% Similarity=0.636 Sum_probs=11.5
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 9 s~~~Gd~i~v~~~ 21 (77)
T 2jmc_A 9 TMKKGDILTLLNS 21 (77)
T ss_dssp CCCTTCEEECCCC
T ss_pred CCCCCCEEEEEEe
Confidence 7999999999875
No 164
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=20.27 E-value=67 Score=22.00 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.9
Q ss_pred CCEEEEEeCCCCcEEEEEEE
Q psy15688 18 GTIVSIMAEGKQHALAIGLT 37 (70)
Q Consensus 18 G~~V~V~~~~~~~~vAVG~~ 37 (70)
|++|.|++. ++.++|.|..
T Consensus 37 G~~v~v~~~-~g~~lg~g~~ 55 (393)
T 4dmg_A 37 VGVAEAVDA-EGHFLAVGYY 55 (393)
T ss_dssp SEEEEEECT-TCCEEEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEEE
Confidence 999999997 7899999866
No 165
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.23 E-value=65 Score=16.66 Aligned_cols=14 Identities=14% Similarity=0.311 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||+|.|....
T Consensus 26 s~~~Gd~i~vl~~~ 39 (80)
T 2ekh_A 26 SFPAGVEVQVLEKQ 39 (80)
T ss_dssp CBCTTCEEEEEEEC
T ss_pred CcCCCCEEEEEEeC
Confidence 69999999998753
No 166
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=20.23 E-value=46 Score=16.48 Aligned_cols=13 Identities=31% Similarity=0.383 Sum_probs=11.2
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 26 s~~~Gd~i~v~~~ 38 (67)
T 1aww_A 26 QLRKGDEYFILEE 38 (67)
T ss_dssp CCCSSCEEECCCC
T ss_pred cCCCCCEEEEEEc
Confidence 6999999999765
No 167
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=20.18 E-value=66 Score=16.27 Aligned_cols=15 Identities=13% Similarity=0.399 Sum_probs=12.5
Q ss_pred CCCCCCEEEEEeCCC
Q psy15688 14 PVDKGTIVSIMAEGK 28 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~ 28 (70)
+|++||++.|...++
T Consensus 28 s~~~Gd~i~v~~~~~ 42 (74)
T 1j3t_A 28 NFSKHDIITVLEQQE 42 (74)
T ss_dssp CBCTTCEEEEEEECS
T ss_pred CCCCCCEEEEEecCC
Confidence 699999999987643
No 168
>2ftc_A Mitochondrial ribosomal protein L1; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=20.18 E-value=32 Score=21.48 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=20.9
Q ss_pred CCCCCCEEEEEeCCCC---cEEEEEEEecCHHHHhc
Q psy15688 14 PVDKGTIVSIMAEGKQ---HALAIGLTTLSTDDIVR 46 (70)
Q Consensus 14 ~~~~G~~V~V~~~~~~---~~vAVG~~~~ss~e~~~ 46 (70)
+++.|. -.+..+.+ .-++||.+.|+.+++.+
T Consensus 114 ~~k~g~--~~r~~k~~~~~i~v~VG~~~~~~e~L~e 147 (189)
T 2ftc_A 114 LFKNGH--EIKVDEERENFLQTKIATLDMSSDQIAA 147 (189)
T ss_pred HHhcce--EEEeccCCCcEEEEEEECCCCCHHHHHH
Confidence 455564 44444332 45899999999999854
No 169
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=20.16 E-value=87 Score=16.42 Aligned_cols=14 Identities=29% Similarity=0.437 Sum_probs=12.1
Q ss_pred CCCCCCEEEEEeCC
Q psy15688 14 PVDKGTIVSIMAEG 27 (70)
Q Consensus 14 ~~~~G~~V~V~~~~ 27 (70)
+|++||++.|....
T Consensus 24 sf~~Gd~i~vl~~~ 37 (84)
T 4ag1_C 24 SFHKGEKFQILEFG 37 (84)
T ss_dssp CBCTTCEEEEEECC
T ss_pred cccCCCEEEEEEec
Confidence 79999999998864
No 170
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=20.13 E-value=69 Score=17.21 Aligned_cols=13 Identities=15% Similarity=0.534 Sum_probs=11.8
Q ss_pred CCCCCCEEEEEeC
Q psy15688 14 PVDKGTIVSIMAE 26 (70)
Q Consensus 14 ~~~~G~~V~V~~~ 26 (70)
+|++||++.|...
T Consensus 47 sf~~GD~I~Vl~~ 59 (89)
T 2rf0_A 47 TLRRGDRVQVLSQ 59 (89)
T ss_dssp CBCTTCEEEEEEC
T ss_pred ccCCCCEEEEEec
Confidence 6999999999886
Done!