Query psy15689
Match_columns 295
No_of_seqs 55 out of 57
Neff 4.3
Searched_HMMs 13730
Date Fri Aug 16 18:58:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15689.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15689hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o4ta1 a.69.4.1 (A:16-105) Un 49.9 16 0.0012 26.6 5.7 55 94-150 25-80 (90)
2 d1b89a_ a.118.1.3 (A:) Clathri 45.0 89 0.0065 26.7 13.7 106 49-162 96-205 (336)
3 d2af7a1 a.152.1.2 (A:1-119) Ga 35.3 35 0.0026 25.1 5.8 44 51-94 70-115 (119)
4 d2cfua2 d.157.1.13 (A:20-524) 35.2 42 0.003 30.6 7.5 62 56-117 418-480 (505)
5 d1f1oa_ a.127.1.1 (A:) Adenylo 32.4 57 0.0042 28.5 7.7 47 226-272 340-386 (408)
6 d1v38a_ a.60.1.2 (A:) Sam-doma 30.7 31 0.0023 23.4 4.5 58 57-114 14-71 (78)
7 d2p6ra1 a.4.5.43 (A:404-488) H 29.8 29 0.0021 24.0 4.2 55 51-120 9-65 (85)
8 d1hnra_ a.155.1.1 (A:) H1 prot 28.5 6.7 0.00049 25.8 0.4 24 120-143 11-34 (47)
9 d1x9fc_ a.1.1.2 (C:) Extracell 28.1 79 0.0058 23.2 6.9 99 147-258 34-143 (149)
10 d1u5tb2 a.4.5.54 (B:490-564) V 27.8 38 0.0027 24.0 4.4 47 148-203 7-53 (75)
11 d2hh6a1 a.69.4.1 (A:1-112) Unc 26.9 67 0.0048 24.1 6.1 48 100-149 51-99 (112)
12 d1o1xa_ c.121.1.1 (A:) Putativ 26.6 18 0.0013 28.3 2.8 43 251-293 15-57 (145)
13 d2fnaa2 c.37.1.20 (A:1-283) Ar 24.0 35 0.0026 26.0 4.1 42 97-141 207-248 (283)
14 d1yvia1 a.24.10.2 (A:2-143) Hi 21.0 1.2E+02 0.0088 22.3 6.7 45 245-291 89-134 (142)
15 d1kg2a_ a.96.1.2 (A:) Catalyti 20.8 36 0.0026 27.5 3.7 129 31-163 47-201 (224)
No 1
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=49.90 E-value=16 Score=26.57 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=39.2
Q ss_pred HhhCCCHHHHHHHHHHHHHHHHHhhCCcchhhhhhccCCCCcHHHHHHhcC-hhhHHH
Q psy15689 94 ILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEH-PTWRSL 150 (295)
Q Consensus 94 ~~~g~~~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~g~~p~WL~~MI~~-~~WR~L 150 (295)
....++..++..++..-|--++.--=|-+.+-.||.+ ++.++-++||.+ ++||.-
T Consensus 25 ~~~~~~~~~~~~il~dil~lleea~~~G~~v~ev~G~--D~~~f~deli~~~k~~~dk 80 (90)
T d2o4ta1 25 KVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTGT--DVAAFCDALIGDSKTYADL 80 (90)
T ss_dssp HHSCCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHCS--CHHHHHHHTTSCSHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHhCC--CHHHHHHHHHhhchhhHHH
Confidence 3344666677667666655555555577888899955 788999999977 777753
No 2
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=45.02 E-value=89 Score=26.69 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=61.7
Q ss_pred cccccHHHHHHHHHHcCCChHHHHHHHhhhhh---hHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHhhCCcchhh
Q psy15689 49 IMEPGIFSQLKRYFQAGGNPEQVIELLSQNYK---AVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFDPKKAD 125 (295)
Q Consensus 49 IMEp~i~~~ik~Y~~~GG~Pe~vV~~Ls~~Y~---G~aQm~nLl~~WL~~~g~~~~ev~~~~e~~Lk~li~k~FDp~kaD 125 (295)
+++|.-...+-..++.-|.++.++.+|...+. ...-+-+.|+.-.. ..+++. +.+|||.. -.+||+.|+.
T Consensus 96 ~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~~~~~~~~~~~L~~lya--k~~~~k----l~e~l~~~-s~~y~~~k~~ 168 (336)
T d1b89a_ 96 VVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS--KFKPQK----MREHLELF-WSRVNIPKVL 168 (336)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHH--TTCHHH----HHHHHHHH-STTSCHHHHH
T ss_pred hcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcCCccchHHHHHHHHHHH--HhChHH----HHHHHHhc-cccCCHHHHH
Confidence 45776555544555667899999999997642 11222233333222 245544 35556543 3479999998
Q ss_pred hhhccCCCCcHHHHHHh-cChhhHHHHHHHHHhCCCcc
Q psy15689 126 TIFTEEGETPAWLTEMI-EHPTWRSLIYRLAEEYPDCL 162 (295)
Q Consensus 126 ~ift~~g~~p~WL~~MI-~~~~WR~Liy~LaE~~p~cl 162 (295)
.+-.+.+-.|+ +--+. ....|.+.+.-+-+..|++.
T Consensus 169 ~~c~~~~l~~e-lv~Ly~~~~~~~~A~~~~i~~~~~~~ 205 (336)
T d1b89a_ 169 RAAEQAHLWAE-LVFLYDKYEEYDNAIITMMNHPTDAW 205 (336)
T ss_dssp HHHHTTTCHHH-HHHHHHHTTCHHHHHHHHHHSTTTTC
T ss_pred HHHHHcCChHH-HHHHHHhcCCHHHHHHHHHHcchhhh
Confidence 88766554333 11121 56667777777777777764
No 3
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.29 E-value=35 Score=25.10 Aligned_cols=44 Identities=18% Similarity=0.260 Sum_probs=37.2
Q ss_pred cccHHHHHHHHHHcCCChHHHHHHH--hhhhhhHHHHHHHHHHHHH
Q psy15689 51 EPGIFSQLKRYFQAGGNPEQVIELL--SQNYKAVAQMANLVAEWLI 94 (295)
Q Consensus 51 Ep~i~~~ik~Y~~~GG~Pe~vV~~L--s~~Y~G~aQm~nLl~~WL~ 94 (295)
+|.+-.+++.=+++|-+|+++.+.+ .--|.|++.+.+-+...-.
T Consensus 70 ~~~l~~H~~~Al~~G~t~eEi~e~~~~~~~y~G~P~a~~a~~~~~e 115 (119)
T d2af7a1 70 DDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAINAVLAAKE 115 (119)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 6889999999999999999999876 4679999999887765443
No 4
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=35.18 E-value=42 Score=30.59 Aligned_cols=62 Identities=15% Similarity=0.241 Sum_probs=53.7
Q ss_pred HHHHHHHHcCCChHHHHHHHhhhhh-hHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHh
Q psy15689 56 SQLKRYFQAGGNPEQVIELLSQNYK-AVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILK 117 (295)
Q Consensus 56 ~~ik~Y~~~GG~Pe~vV~~Ls~~Y~-G~aQm~nLl~~WL~~~g~~~~ev~~~~e~~Lk~li~k 117 (295)
+.=++|+..-|..+.|++..-+.|. |--|.|--|.+++..+..+..+.+++.-+.++++-.+
T Consensus 418 ~~a~~~v~~~GG~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 480 (505)
T d2cfua2 418 DSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 480 (505)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 3457899988889999999988886 8999999999999999999999999888888887654
No 5
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]}
Probab=32.38 E-value=57 Score=28.50 Aligned_cols=47 Identities=15% Similarity=0.036 Sum_probs=38.6
Q ss_pred chhHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHhcCCCcchhHh
Q psy15689 226 QHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPIIM 272 (295)
Q Consensus 226 ehTYlyaQ~lL~~L~~~~~g~~~~~rlsqele~~A~~~g~~v~~i~~ 272 (295)
...+++++.+...|.+..=+...+.++..++-+.|..+|.++..+..
T Consensus 340 ~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~l~ 386 (408)
T d1f1oa_ 340 TLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFRELVE 386 (408)
T ss_pred hcCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 45689999999999876555778899999999999999998877643
No 6
>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.69 E-value=31 Score=23.36 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=44.2
Q ss_pred HHHHHHHcCCChHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHH
Q psy15689 57 QLKRYFQAGGNPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDM 114 (295)
Q Consensus 57 ~ik~Y~~~GG~Pe~vV~~Ls~~Y~G~aQm~nLl~~WL~~~g~~~~ev~~~~e~~Lk~l 114 (295)
.|..+++.=|=+.=+-.+..++|.|...+..+-.+.|..+|+....=+.-+...++.+
T Consensus 14 ~V~~WL~~lgL~~Y~~~F~~~g~~~~~~l~~l~~~dL~~lGI~~~~hr~kil~ai~~L 71 (78)
T d1v38a_ 14 TIQEFLERIHLQEYTSTLLLNGYETLDDLKDIKESHLIELNIADPEDRARLLSAAESL 71 (78)
T ss_dssp BHHHHHHTTTCGGGHHHHHHHTCCBHHHHTTCCHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHcCccchHHHccCCHHHHhHcCCCCHHHHHHHHHHHHHh
Confidence 4667777778777777888888999999999999999999996544444445555554
No 7
>d2p6ra1 a.4.5.43 (A:404-488) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=29.80 E-value=29 Score=24.04 Aligned_cols=55 Identities=9% Similarity=0.081 Sum_probs=41.7
Q ss_pred cccHHHHHHHHHHcCC--ChHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHhhCC
Q psy15689 51 EPGIFSQLKRYFQAGG--NPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120 (295)
Q Consensus 51 Ep~i~~~ik~Y~~~GG--~Pe~vV~~Ls~~Y~G~aQm~nLl~~WL~~~g~~~~ev~~~~e~~Lk~li~k~FD 120 (295)
||.+-.+|..=|-.|+ +.+++++.|+..| .+.|+- .+ ++..+++.|+.+....|=
T Consensus 9 ~~~L~~hllaeIasg~i~s~~e~~~~l~~Tf-~~~q~~-----------~~---l~~~i~~~l~~L~~~~~I 65 (85)
T d2p6ra1 9 ETHLRFHSLSIICDGYAKTLEELEDFFADTF-FFKQNE-----------IS---LSYELERVVRQLENWGMV 65 (85)
T ss_dssp HHHHHHHHHHHHHHTSCSSHHHHHHHHHTST-THHHHC-----------CC---CHHHHHHHHHHHHHTTSE
T ss_pred hHHHHHHHHHHHHcCCCCCHHHHHHHHHHhH-HHHhhh-----------hc---HHHHHHHHHHHHHHCCCc
Confidence 5667777888887776 7799999999999 556652 22 345688999999888884
No 8
>d1hnra_ a.155.1.1 (A:) H1 protein (H-NS) {Escherichia coli [TaxId: 562]}
Probab=28.52 E-value=6.7 Score=25.81 Aligned_cols=24 Identities=25% Similarity=0.500 Sum_probs=20.9
Q ss_pred CcchhhhhhccCCCCcHHHHHHhc
Q psy15689 120 DPKKADTIFTEEGETPAWLTEMIE 143 (295)
Q Consensus 120 Dp~kaD~ift~~g~~p~WL~~MI~ 143 (295)
||+.-..-+|..|.+|.|+.+.|+
T Consensus 11 ~~~g~~~tWTGrGR~P~w~~~~l~ 34 (47)
T d1hnra_ 11 DENGETKTWTGQGRTPAVIKKAMD 34 (47)
T ss_dssp CSSCCCEECCTTSSCCSHHHHHHH
T ss_pred CCCCCcceeecCCcCCHHHHHHHH
Confidence 777778889999999999999873
No 9
>d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]}
Probab=28.09 E-value=79 Score=23.19 Aligned_cols=99 Identities=12% Similarity=0.128 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhCCCcc-chHHHHHHHhhcchhhhhhhhhhHHhHHHHHHHHHHHHHHHhhcC---chhHHHHHHHHHHh-
Q psy15689 147 WRSLIYRLAEEYPDCL-MLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISNFLES---SDDWQSSVEECAKM- 221 (295)
Q Consensus 147 WR~Liy~LaE~~p~cl-~LnfaIk~IsdaG~q~EI~sv~taa~~~eVF~rvL~~~l~~~~~~---~d~~~~~~~el~km- 221 (295)
++.++.+|-+.||+.. +.. .+.++..+-+ .|.--...+...|..++.+ ++.+...+.+|.+.
T Consensus 34 G~~~f~~lF~~~P~~k~~F~---------~~~~~~~~~~----~~~~Ha~~v~~~l~~~I~~ldd~~~l~~~L~~lg~~H 100 (149)
T d1x9fc_ 34 GRLLLTKLAKDIPEVNDLFK---------RVDIEHAEGP----KFSAHALRILNGLDLAINLLDDPPALDAALDHLAHQH 100 (149)
T ss_dssp HHHHHHHHHHHSTTHHHHTG---------GGTGGGTTSH----HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHChhHHHhcc---------cccccccccH----HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhH
Confidence 5667778888888762 111 1112222222 2222223333444555543 44566667777532
Q ss_pred ----hhccchhHHHHHHHHHHHhccCCc--hhHHHHHHHHHHH
Q psy15689 222 ----VCHGQHTYVYSQVLLQVLSLESKG--GSKVKRLAQEITK 258 (295)
Q Consensus 222 ----~C~sehTYlyaQ~lL~~L~~~~~g--~~~~~rlsqele~ 258 (295)
.-..+|--.++++|+..|.+.-.+ ...++++-+.|-.
T Consensus 101 ~~r~gv~~~~f~~~~~~l~~~l~~~l~~~~~~AW~~~~~~i~~ 143 (149)
T d1x9fc_ 101 EVREGVQKAHFKKFGEILATGLPQVLDDYDALAWKSCLKGILT 143 (149)
T ss_dssp HTSTTCCHHHHHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHH
Confidence 344678888888888888764433 3456665555543
No 10
>d1u5tb2 a.4.5.54 (B:490-564) Vacuolar protein sorting-associated protein VPS36 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.78 E-value=38 Score=23.95 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCccchHHHHHHHhhcchhhhhhhhhhHHhHHHHHHHHHHHHHHH
Q psy15689 148 RSLIYRLAEEYPDCLMLNFTIKLISDAGFQREITSISTAAQQIEVFSRVLKTSISN 203 (295)
Q Consensus 148 R~Liy~LaE~~p~cl~LnfaIk~IsdaG~q~EI~sv~taa~~~eVF~rvL~~~l~~ 203 (295)
|+-|.++++..|-|.+|..+=++=++. +..+=.++|-..||+.||+.
T Consensus 7 k~ki~~~i~~~pG~DlLqlT~~ln~~~---------~~nnW~iGvi~EVlqncv~e 53 (75)
T d1u5tb2 7 KEKLVDLIGDNPGSDLLRLTQILSSNN---------SKSNWTLGILMEVLQNCVDE 53 (75)
T ss_dssp HHHHHHHHHHSCSBCHHHHHHHHHTSC---------TTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccHHHHHHHHcccC---------CcccchHHHHHHHHHHHHhc
Confidence 678899999999999998876654331 22345689999999999873
No 11
>d2hh6a1 a.69.4.1 (A:1-112) Uncharacterized protein BH3980 {Bacillus halodurans [TaxId: 86665]}
Probab=26.94 E-value=67 Score=24.06 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCCcchhhhhhccCCCCcHHHHHHhcC-hhhHH
Q psy15689 100 VTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEH-PTWRS 149 (295)
Q Consensus 100 ~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~g~~p~WL~~MI~~-~~WR~ 149 (295)
-.++..++..-|.-++.--=|-+.+-++|.+ ++.++-++||.+ |+||.
T Consensus 51 ~~~~~~il~~Il~l~eea~~~G~~v~~v~G~--D~~~f~deli~~~~~~~~ 99 (112)
T d2hh6a1 51 WQDTKRIFGGILDLFEEGAAEGKKVTDLTGE--DVAAFCDELMKDTKTWMD 99 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHCS--CHHHHHHHHHTTSCBHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCCHHHHhCC--CHHHHHHHHHHHhhhhHH
Confidence 3556566666555555555677888889955 788999999976 67774
No 12
>d1o1xa_ c.121.1.1 (A:) Putative sugar-phosphate isomerase {Thermotoga maritima [TaxId: 2336]}
Probab=26.56 E-value=18 Score=28.26 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcCCCcchhHhhhcCCCCchhHHHHHHHHhcc
Q psy15689 251 RLAQEITKCAQQSGHDVTPIIMALNGAAFYPQANQALSSMISR 293 (295)
Q Consensus 251 rlsqele~~A~~~g~~v~~i~~~L~~~~~yp~~~~a~~sml~~ 293 (295)
.|.++|-++-.++|+.|.++...-.....||.+..++..-+.+
T Consensus 15 ~lK~~l~~~L~~~g~~v~D~G~~~~~~~dYpd~a~~va~~v~~ 57 (145)
T d1o1xa_ 15 ELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILS 57 (145)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCCCCCccHHHHHHHHHHhc
Confidence 3556666666788999998876566677899998888766554
No 13
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.98 E-value=35 Score=25.99 Aligned_cols=42 Identities=19% Similarity=0.423 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhCCcchhhhhhccCCCCcHHHHHH
Q psy15689 97 GVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEM 141 (295)
Q Consensus 97 g~~~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~g~~p~WL~~M 141 (295)
+.+.+++.+++..+++. ..++++.++.|+...|..|.||..+
T Consensus 207 ~l~~~e~~~~l~~~~~~---~~~~~~~~~~i~~~~~G~P~~L~~~ 248 (283)
T d2fnaa2 207 PFSREEAIEFLRRGFQE---ADIDFKDYEVVYEKIGGIPGWLTYF 248 (283)
T ss_dssp CCCHHHHHHHHHHHHHH---HTCCCCCHHHHHHHHCSCHHHHHHH
T ss_pred CCCHHHHHHHHHhhhhh---cCCCHHHHHHHHHHhCCCHHHHHHH
No 14
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=20.95 E-value=1.2e+02 Score=22.27 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=28.7
Q ss_pred chhHHHHHHHHHHHHHHhcCCCcchhHhhhcCCCC-chhHHHHHHHHh
Q psy15689 245 GGSKVKRLAQEITKCAQQSGHDVTPIIMALNGAAF-YPQANQALSSMI 291 (295)
Q Consensus 245 g~~~~~rlsqele~~A~~~g~~v~~i~~~L~~~~~-yp~~~~a~~sml 291 (295)
|+..+..++.+||..+... +...+.-++..-.. |-.+.+++..+|
T Consensus 89 Ga~~l~~~~~~lE~~~~~~--~~~~~~~~~~~L~~e~~~l~~~L~~~l 134 (142)
T d1yvia1 89 GAQKVKFTCMQFRQFCQDK--SRDGCLMALAVVRNDFYDLRNKFQTML 134 (142)
T ss_dssp TCHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4668899999999998554 44455444444333 556666665554
No 15
>d1kg2a_ a.96.1.2 (A:) Catalytic domain of MutY {Escherichia coli [TaxId: 562]}
Probab=20.82 E-value=36 Score=27.51 Aligned_cols=129 Identities=9% Similarity=0.123 Sum_probs=70.9
Q ss_pred ChHHHHHHHHHhcCCCCccccccHHHHHHHHHHcCCChH------HHHHHHhhhhhhHHHHHHHHHHHHHhhCCCHHHHH
Q psy15689 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPE------QVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQ 104 (295)
Q Consensus 31 ~~~~~~~e~~~~l~~~DaIMEp~i~~~ik~Y~~~GG~Pe------~vV~~Ls~~Y~G~aQm~nLl~~WL~~~g~~~~ev~ 104 (295)
+...+.....+++.+++.+-+-+. +.|...++..|=+. .....+.+.|.|. +=....+.+..=|+++..-.
T Consensus 47 ~v~~~~~~l~~~~pt~~~la~a~~-~~l~~~i~~~g~~~ka~~l~~~~~~i~~~~~g~--vp~~~~~L~~LpGVG~kTA~ 123 (224)
T d1kg2a_ 47 TVIPYFERFMARFPTVTDLANAPL-DEVLHLWTGLGYYARARNLHKAAQQVATLHGGK--FPETFEEVAALPGVGRSTAG 123 (224)
T ss_dssp HHHHHHHHHHHHCSSHHHHHHSCH-HHHHHHHTTSCCTHHHHHHHHHHHHHHHHSTTS--CCCSHHHHHTSTTCCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHhhH-HHHHhHhhhhhHHHHHHHHHHhhhhhhhhccCC--cchHHHHHHHHHhhhhhhhH
Confidence 455666667777777777777775 55667777777443 3444455555552 22334556777788888776
Q ss_pred HHHH-----------HHHHHHHHhhCCcchh-hhhhccCCCCcHHHHHHhcChhhHHHHHHH---HH-----hCCCccc
Q psy15689 105 AMVE-----------NHLKDMILKTFDPKKA-DTIFTEEGETPAWLTEMIEHPTWRSLIYRL---AE-----EYPDCLM 163 (295)
Q Consensus 105 ~~~e-----------~~Lk~li~k~FDp~ka-D~ift~~g~~p~WL~~MI~~~~WR~Liy~L---aE-----~~p~cl~ 163 (295)
.++. -|++..+..-|....- +.-- .+...-.++..++....|+..=.-| .. +.|.|--
T Consensus 124 ~il~~a~~~~~~~vD~~v~Rv~~Rl~~~~~~~~~~~-~~~~l~~~~~~~lp~~~~~~~~~~l~~~G~~iC~~~~P~C~~ 201 (224)
T d1kg2a_ 124 AILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKE-VENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSL 201 (224)
T ss_dssp HHHHHHHCCSCCCCCHHHHHHHHHHHTCCSCTTSHH-HHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTSCSSSCCGGG
T ss_pred HHHHHhhhcccccccchHHHHHHHhccccCCccchH-HHHHHHHHhhccCcchhhhHHHHHHHHHhHHHccCCCCCCCC
Confidence 6643 4666665554432110 0000 0001123445666777776544444 32 4677643
Done!