Your job contains 1 sequence.
>psy15690
MSITLTKYTLDMEAEQKNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLP
NNWEARKRKAEWILKDEEQRQKALEEGEDYERVKMLNMTVAEAEKFNKKKKNPDVGFSDY
QQATARQYNRLVKQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLE
KQISKREKYSRRRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15690
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1P0B5 - symbol:SYF2 "Uncharacterized protein" ... 669 9.4e-66 1
MGI|MGI:1915842 - symbol:Syf2 "SYF2 homolog, RNA splicing... 667 1.5e-65 1
RGD|621592 - symbol:Syf2 "SYF2 homolog, RNA splicing fact... 667 1.5e-65 1
FB|FBgn0033556 - symbol:CG12343 species:7227 "Drosophila ... 665 2.5e-65 1
UNIPROTKB|I3LK70 - symbol:SYF2 "Uncharacterized protein" ... 661 6.7e-65 1
UNIPROTKB|Q28XK6 - symbol:Syf2 "Pre-mRNA-splicing factor ... 661 6.7e-65 1
UNIPROTKB|F1N607 - symbol:SYF2 "Uncharacterized protein" ... 660 8.5e-65 1
UNIPROTKB|O95926 - symbol:SYF2 "Pre-mRNA-splicing factor ... 658 1.4e-64 1
ZFIN|ZDB-GENE-040801-170 - symbol:syf2 "SYF2 homolog, RNA... 637 2.3e-62 1
WB|WBGene00019402 - symbol:K04G7.11 species:6239 "Caenorh... 468 1.9e-44 1
POMBASE|SPBC3E7.13c - symbol:syf2 "splicing factor, SYF2 ... 313 5.0e-28 1
TAIR|locus:2039395 - symbol:AT2G16860 "AT2G16860" species... 283 7.6e-25 1
ASPGD|ASPL0000050771 - symbol:AN1861 species:162425 "Emer... 181 1.1e-23 2
UNIPROTKB|Q521C0 - symbol:SYF2 "Pre-mRNA-splicing factor ... 169 6.6e-21 2
DICTYBASE|DDB_G0284573 - symbol:syf2 "putative pre-mRNA-s... 174 4.6e-13 1
ZFIN|ZDB-GENE-091204-426 - symbol:si:ch1073-181h11.4 "si:... 99 7.2e-06 2
UNIPROTKB|G4NE20 - symbol:MGG_00840 "Uncharacterized prot... 117 0.00023 1
GENEDB_PFALCIPARUM|PF11_0486 - symbol:PF11_0486 "MAEBL, p... 122 0.00029 1
UNIPROTKB|Q8IHP3 - symbol:PF11_0486 "MAEBL, putative" spe... 122 0.00029 1
FB|FBgn0261258 - symbol:rgn "regeneration" species:7227 "... 117 0.00052 2
WB|WBGene00006589 - symbol:tnt-4 species:6239 "Caenorhabd... 110 0.00071 1
>UNIPROTKB|F1P0B5 [details] [associations]
symbol:SYF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
GO:GO:0071013 GeneTree:ENSGT00390000017845 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 EMBL:AADN02043972
IPI:IPI00811534 Ensembl:ENSGALT00000001893 Uniprot:F1P0B5
Length = 235
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 126/216 (58%), Positives = 160/216 (74%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K ERL++ +E+HLKRNE+R+LNHQEVVEED+R +LP NWEA+K + EW LK EE++++
Sbjct: 20 QKREERLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPPNWEAKKARLEWELKVEEKKKE 79
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYERVK+L ++ PD+GFSDY A RQY RL +Q+KPD+
Sbjct: 80 CAARGEDYERVKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQLRQYQRLTRQIKPDLE 139
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
+YE+ K++ G A Y ++L G H E +D+MV DLEKQI KREKYSRRR +NDDAD
Sbjct: 140 QYEKLKEQYGEALYPTSDSLLHGTHVPDKEGIDRMVADLEKQIEKREKYSRRRPYNDDAD 199
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 200 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 235
>MGI|MGI:1915842 [details] [associations]
symbol:Syf2 "SYF2 homolog, RNA splicing factor (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IMP] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] MGI:MGI:1915842 GO:GO:0005634
GO:GO:0008380 GO:GO:0001701 GO:GO:0006397 GO:GO:0071013
GO:GO:0007369 GO:GO:0048568 GO:GO:0031576 KO:K12868
eggNOG:NOG147890 GeneTree:ENSGT00390000017845 HOGENOM:HOG000190170
OMA:AYNDDAD InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231
CTD:25949 HOVERGEN:HBG080129 OrthoDB:EOG4X0MT8 EMBL:AY155574
EMBL:AY033432 EMBL:AK003787 EMBL:AK152794 EMBL:BC051484
IPI:IPI00133410 RefSeq:NP_081056.1 UniGene:Mm.29989
ProteinModelPortal:Q9D198 STRING:Q9D198 PhosphoSite:Q9D198
PRIDE:Q9D198 Ensembl:ENSMUST00000030622 GeneID:68592 KEGG:mmu:68592
InParanoid:Q9D198 ChiTaRS:SYF2 NextBio:327522 Bgee:Q9D198
CleanEx:MM_SYF2 Genevestigator:Q9D198 GermOnline:ENSMUSG00000028821
Uniprot:Q9D198
Length = 242
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 124/216 (57%), Positives = 161/216 (74%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K +RL++ +E+HLKRNE+R+LNHQEVVEED+R +LP NWEA+K + EW L++EE++++
Sbjct: 27 QKREQRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKKKE 86
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYE+VK+L ++ PD+GFSDY A RQY+RL KQ+KPDM
Sbjct: 87 CAARGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQYHRLTKQIKPDME 146
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
YE Q++K G F+ ++L G H E +D+MV DLEKQI KR+KYSRRR +NDDAD
Sbjct: 147 SYERQREKHGEDFFPTSNSLLHGTHVPSSEEIDRMVLDLEKQIEKRDKYSRRRPYNDDAD 206
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 207 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242
>RGD|621592 [details] [associations]
symbol:Syf2 "SYF2 homolog, RNA splicing factor (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007369
"gastrulation" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0048568 "embryonic organ development"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] RGD:621592 GO:GO:0008380 GO:GO:0006397
GO:GO:0071013 KO:K12868 eggNOG:NOG147890
GeneTree:ENSGT00390000017845 HOGENOM:HOG000190170
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 CTD:25949
HOVERGEN:HBG080129 OrthoDB:EOG4X0MT8 EMBL:AF366369 EMBL:BC097289
IPI:IPI00208161 RefSeq:NP_596908.1 UniGene:Rn.162117
ProteinModelPortal:Q4QRB2 STRING:Q4QRB2 PRIDE:Q4QRB2
Ensembl:ENSRNOT00000024271 GeneID:170933 KEGG:rno:170933
UCSC:RGD:621592 InParanoid:Q4QRB2 NextBio:621455
Genevestigator:Q4QRB2 GermOnline:ENSRNOG00000017742 Uniprot:Q4QRB2
Length = 242
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 124/216 (57%), Positives = 161/216 (74%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K +RL++ +E+HLKRNE+R+LNHQEVVEED+R +LP NWEA+K + EW L++EE++++
Sbjct: 27 QKREQRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKKKE 86
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYE+VK+L ++ PD+GFSDY A RQY+RL KQ+KPDM
Sbjct: 87 CAARGEDYEKVKLLEISAEDAERWERRKKKKNPDLGFSDYAAAQLRQYHRLTKQIKPDME 146
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
YE Q++K G F+ ++L G H E +D+MV DLEKQI KR+KYSRRR +NDDAD
Sbjct: 147 SYERQREKHGEDFFPTSNSLLHGTHVPSSEEIDRMVLDLEKQIEKRDKYSRRRPYNDDAD 206
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 207 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 242
>FB|FBgn0033556 [details] [associations]
symbol:CG12343 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] EMBL:AE013599 GO:GO:0022008
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K12868
eggNOG:NOG147890 GeneTree:ENSGT00390000017845 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 EMBL:BT022631
RefSeq:NP_610617.1 UniGene:Dm.30963 STRING:Q9V5Q4 PaxDb:Q9V5Q4
PRIDE:Q9V5Q4 EnsemblMetazoa:FBtr0088247 GeneID:36143
KEGG:dme:Dmel_CG12343 UCSC:CG12343-RA FlyBase:FBgn0033556
InParanoid:Q9V5Q4 OrthoDB:EOG4VX0N3 PhylomeDB:Q9V5Q4
GenomeRNAi:36143 NextBio:797065 Bgee:Q9V5Q4 GermOnline:CG12343
Uniprot:Q9V5Q4
Length = 226
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 133/225 (59%), Positives = 161/225 (71%)
Query: 16 QKNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILK 75
+K T EK AER RL ++H KR E+R NHQEVV ED RK+LP NWEARKR+AEWIL
Sbjct: 2 EKTKTAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWEARKRQAEWILA 61
Query: 76 DEEQRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXX---PDVGFSDYQQATARQYNRLV 132
D++ R +A G+DYER+K+L ++ PD+GFS Y+ TARQYNRLV
Sbjct: 62 DDKARAEAQAAGKDYERLKLLEVSAVDADRIEKKKKRKDNPDLGFSTYEAQTARQYNRLV 121
Query: 133 KQMKP-DMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSR 191
K M D+ KYE QK++LG AFYG T L D P A++KMV DLE+QI +R+KYSR
Sbjct: 122 KSMPARDLEKYERQKEELGDAFYGGAHTTLHSRTKDTPGAINKMVTDLEQQIERRKKYSR 181
Query: 192 RRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
RR +NDDAD+D+INERN KFNKKL+RFY EHTAEIKQNLERGTAI
Sbjct: 182 RRIYNDDADVDFINERNSKFNKKLDRFYSEHTAEIKQNLERGTAI 226
>UNIPROTKB|I3LK70 [details] [associations]
symbol:SYF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
GO:GO:0071013 GeneTree:ENSGT00390000017845 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231
Ensembl:ENSSSCT00000026402 Uniprot:I3LK70
Length = 249
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 123/216 (56%), Positives = 160/216 (74%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K +RL++ +E+HLKRNE+R+LNHQEVVEED+R +LP NWEA+K + EW L++EE++++
Sbjct: 34 QKREQRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKKKE 93
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYE+VK+L ++ PD+GFSDY A RQY+RL KQ+KPDM
Sbjct: 94 CAARGEDYEKVKLLEISAEDAERWERKKRRKNPDLGFSDYAAAQLRQYHRLTKQIKPDME 153
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
YE ++K G F+ ++L G H E +D+MV DLEKQI KR+KYSRRR +NDDAD
Sbjct: 154 TYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVVDLEKQIEKRDKYSRRRPYNDDAD 213
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 214 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 249
>UNIPROTKB|Q28XK6 [details] [associations]
symbol:Syf2 "Pre-mRNA-splicing factor Syf2" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0071004 "U2-type
prespliceosome" evidence=ISS] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=ISS] [GO:0071007 "U2-type catalytic step 2
spliceosome" evidence=ISS] [GO:0071008 "U2-type post-mRNA release
spliceosomal complex" evidence=ISS] EMBL:CM000071
GenomeReviews:CM000071_GR GO:GO:0000398 GO:GO:0071006 GO:GO:0071007
GO:GO:0071008 GO:GO:0071004 KO:K12868 eggNOG:NOG147890 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 OrthoDB:EOG4VX0N3
RefSeq:XP_001361731.1 GeneID:4805311 KEGG:dpo:Dpse_GA11568
FlyBase:FBgn0071619 InParanoid:Q28XK6 Uniprot:Q28XK6
Length = 226
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 130/225 (57%), Positives = 164/225 (72%)
Query: 16 QKNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILK 75
+++ + +K AER RL ++H KR E+R NHQEVV ED RK+LP NWEARKR+AEW+L
Sbjct: 2 EQSKSASDKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWEARKRQAEWLLA 61
Query: 76 DEEQRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXX---PDVGFSDYQQATARQYNRLV 132
D++ R+ A G+DYER+K+L ++ PD+GFS Y+ TARQY+RLV
Sbjct: 62 DDKAREDAQAAGKDYERLKLLEVSAIDAERIEKKKKRKDNPDLGFSTYEAQTARQYSRLV 121
Query: 133 KQMKP-DMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSR 191
K M DM KYE+QK +LG AFYG T L L D P A++KMV DL++QI +R+KYSR
Sbjct: 122 KGMPARDMEKYEKQKAELGEAFYGGPHTTLHALTKDTPAAINKMVNDLDQQIERRKKYSR 181
Query: 192 RRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
RR +NDDAD+D+INERN KFNKKL+RFYGEHTAEIKQNLERGTAI
Sbjct: 182 RRIYNDDADVDFINERNSKFNKKLDRFYGEHTAEIKQNLERGTAI 226
>UNIPROTKB|F1N607 [details] [associations]
symbol:SYF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
GO:GO:0071013 GeneTree:ENSGT00390000017845 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 EMBL:DAAA02006397
IPI:IPI01002469 Ensembl:ENSBTAT00000002165 Uniprot:F1N607
Length = 235
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 123/216 (56%), Positives = 160/216 (74%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K +RL++ +E+HLKRNE+R+LNHQEVVEED+R +LP NWEA+K + EW L++EE++++
Sbjct: 20 QKREQRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELQEEEKKKE 79
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYE+VK+L ++ PD+GFSDY A RQY+RL KQ+KPDM
Sbjct: 80 CAARGEDYEKVKLLEISAEDAERWERKKRRKNPDLGFSDYAAAQLRQYHRLTKQIKPDME 139
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
YE ++K G F+ ++L G H E +D+MV DLEKQI KR+KYSRRR +NDDAD
Sbjct: 140 TYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVLDLEKQIEKRDKYSRRRPYNDDAD 199
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 200 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 235
>UNIPROTKB|O95926 [details] [associations]
symbol:SYF2 "Pre-mRNA-splicing factor SYF2" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] GO:GO:0000398 GO:GO:0071013
KO:K12868 eggNOG:NOG147890 HOGENOM:HOG000190170 OMA:AYNDDAD
InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231 CTD:25949
HOVERGEN:HBG080129 OrthoDB:EOG4X0MT8 EMBL:AF273089 EMBL:AL080166
EMBL:AL031432 EMBL:BC010862 IPI:IPI00022963 PIR:T12485
RefSeq:NP_056299.1 RefSeq:NP_997053.1 UniGene:Hs.20013
ProteinModelPortal:O95926 IntAct:O95926 STRING:O95926
PhosphoSite:O95926 PRIDE:O95926 DNASU:25949 Ensembl:ENST00000236273
Ensembl:ENST00000354361 GeneID:25949 KEGG:hsa:25949 UCSC:uc001bjt.1
GeneCards:GC01M025548 HGNC:HGNC:19824 HPA:HPA018265 MIM:607090
neXtProt:NX_O95926 PharmGKB:PA142670853 InParanoid:O95926
PhylomeDB:O95926 GenomeRNAi:25949 NextBio:47546 Bgee:O95926
CleanEx:HS_SYF2 Genevestigator:O95926 GermOnline:ENSG00000117614
Uniprot:O95926
Length = 243
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 123/216 (56%), Positives = 159/216 (73%)
Query: 23 EKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQK 82
+K +RL++ +E+HL RNE+R+LNHQEVVEED+R +LP NWEA+K + EW LK+EE++++
Sbjct: 28 QKREQRLRKFRELHLMRNEARKLNHQEVVEEDKRLKLPANWEAKKARLEWELKEEEKKKE 87
Query: 83 ALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMS 140
GEDYE+VK+L ++ PD+GFSDY A RQY+RL KQ+KPDM
Sbjct: 88 CAARGEDYEKVKLLEISAEDAERWERKKKRKNPDLGFSDYAAAQLRQYHRLTKQIKPDME 147
Query: 141 KYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDAD 200
YE ++K G F+ ++L G H E +D+MV DLEKQI KR+KYSRRR +NDDAD
Sbjct: 148 TYERLREKHGEEFFPTSNSLLHGTHVPSTEEIDRMVIDLEKQIEKRDKYSRRRPYNDDAD 207
Query: 201 IDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 208 IDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 243
>ZFIN|ZDB-GENE-040801-170 [details] [associations]
symbol:syf2 "SYF2 homolog, RNA splicing factor (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] ZFIN:ZDB-GENE-040801-170
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 KO:K12868
eggNOG:NOG147890 GeneTree:ENSGT00390000017845 HOGENOM:HOG000190170
OMA:AYNDDAD InterPro:IPR013260 PANTHER:PTHR13264 Pfam:PF08231
EMBL:BC076298 EMBL:BC091556 IPI:IPI00486427 RefSeq:NP_001003437.1
UniGene:Dr.75653 STRING:Q6DGP2 PRIDE:Q6DGP2
Ensembl:ENSDART00000099950 GeneID:445043 KEGG:dre:445043 CTD:25949
HOVERGEN:HBG080129 InParanoid:Q6DGP2 OrthoDB:EOG4X0MT8
NextBio:20831806 ArrayExpress:Q6DGP2 Bgee:Q6DGP2 Uniprot:Q6DGP2
Length = 238
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 119/226 (52%), Positives = 162/226 (71%)
Query: 13 EAEQKNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEW 72
E E +K ERL++ +E+H KRNE+R+LNHQEVVEED+R +LP+NWEA+K + E+
Sbjct: 13 EEEVTETPAAQKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNWEAKKARLEY 72
Query: 73 ILKDEEQRQKALEEGEDYERVKMLNMTVXXXXX--XXXXXXXPDVGFSDYQQATARQYNR 130
L ++++++ E GEDY+RVK+L ++ PD GFS Y +A RQY R
Sbjct: 73 ELLVDQKKKECAERGEDYDRVKLLEISAEDAERWERKKKKRNPDPGFSGYAEAQLRQYQR 132
Query: 131 LVKQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYS 190
L KQ+KPDM YE+QK++ G F+ +++ G H +++++MV+D+EKQI KR KYS
Sbjct: 133 LTKQIKPDMENYEKQKEECGEDFHPTSNSLIYGTHVPSKDSINRMVDDVEKQIEKRAKYS 192
Query: 191 RRRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
RRR +NDDADIDYINERN KFNKK ERFYG++TAEIKQNLERGTA+
Sbjct: 193 RRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV 238
>WB|WBGene00019402 [details] [associations]
symbol:K04G7.11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0016477 GO:GO:0008406
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
EMBL:FO080149 KO:K12868 PIR:A88500 PIR:H88499 RefSeq:NP_498566.3
STRING:Q09385 PaxDb:Q09385 EnsemblMetazoa:K04G7.11.1
EnsemblMetazoa:K04G7.11.2 GeneID:176003 KEGG:cel:CELE_K04G7.11
CTD:176003 WormBase:K04G7.11 eggNOG:NOG147890
GeneTree:ENSGT00390000017845 HOGENOM:HOG000190170 InParanoid:Q09385
OMA:AYNDDAD NextBio:890694 InterPro:IPR013260 PANTHER:PTHR13264
Pfam:PF08231 Uniprot:Q09385
Length = 234
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 88/211 (41%), Positives = 137/211 (64%)
Query: 30 KRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQKALEEGED 89
+R +++H R +R+ NH++VVEEDRR +LP N EA+K + +W +K+ + R+ A ++G D
Sbjct: 24 QRFRDLHKLRQRARKENHEQVVEEDRRSKLPKNHEAKKERDQWQVKELQDRKAAEDKGLD 83
Query: 90 YERVKMLNMTVXXXXXXXXXXXX---PDVGFSDYQQATARQYNRLVKQMKPDMSKYEEQK 146
YERV+ L M+ PD GF+ Y+ T RQ+ RL + PD+ Y++ +
Sbjct: 84 YERVRSLEMSADVTEKLEQKRKRKKNPDQGFTSYEDMTLRQHTRLTAALDPDLDSYKKMR 143
Query: 147 KKLG-PAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDADIDYIN 205
+ +G FY T++ G H A+DK+ +D+ Q+ +RE+Y RRR ++ DA IDYIN
Sbjct: 144 ECVGGEQFYPTADTLIHGNHYPTTAAMDKLTKDVHGQVKRREQYHRRRLYDPDAPIDYIN 203
Query: 206 ERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
E+N KFNKKL+++YG++T +IK +LERGTAI
Sbjct: 204 EKNKKFNKKLDKYYGKYTEDIKDDLERGTAI 234
>POMBASE|SPBC3E7.13c [details] [associations]
symbol:syf2 "splicing factor, SYF2 family (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0007127 "meiosis I" evidence=IEP]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0045292 "mRNA
cis splicing, via spliceosome" evidence=ISS] PomBase:SPBC3E7.13c
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0007127
GO:GO:0030437 GO:GO:0045292 KO:K12868 eggNOG:NOG147890
HOGENOM:HOG000190170 OMA:AYNDDAD InterPro:IPR013260
PANTHER:PTHR13264 Pfam:PF08231 OrthoDB:EOG4ZGSP5 PIR:T40387
RefSeq:NP_596100.1 IntAct:O59733 STRING:O59733
EnsemblFungi:SPBC3E7.13c.1 GeneID:2540611 KEGG:spo:SPBC3E7.13c
NextBio:20801736 Uniprot:O59733
Length = 229
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 76/221 (34%), Positives = 125/221 (56%)
Query: 28 RLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQKALEEG 87
R+++LK+I + +S N +EVV+E R ++ E R + ++E + + EEG
Sbjct: 11 RVEKLKKIREQMRKSSHENRKEVVQEHSRMRIDPALERRLERKRMEAEEELAKIETEEEG 70
Query: 88 EDYERVKMLNMTVXXXXX-----XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPDMSKY 142
D+ER + + T+ +V FSDY ++ YNR ++ +KPD KY
Sbjct: 71 GDFERRRAWDWTIEESEKWDQRLRKKKQTIQNVAFSDYHSQASKDYNRGIRDLKPDYEKY 130
Query: 143 -----EEQKKKLGPAFYGDQKTILQGLHSDRP--EAVDKMVEDLEKQISKREKYSRRRTH 195
EE+ K A Y D+ L + S++P E V+++VE ++KQ +R K ++RR
Sbjct: 131 DKDKKEEKSKSRSVALY-DEAERLDWV-SNKPDKEHVERLVESIKKQDQRRLKNTKRRGT 188
Query: 196 NDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
+++ I +INERN KFN KL+RFY ++T +IK++LERGTA+
Sbjct: 189 DEEDHITFINERNRKFNLKLQRFYSKYTKDIKEDLERGTAL 229
>TAIR|locus:2039395 [details] [associations]
symbol:AT2G16860 "AT2G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 EMBL:AC005825 EMBL:AC005167 KO:K12868
HOGENOM:HOG000190170 InterPro:IPR013260 PANTHER:PTHR13264
Pfam:PF08231 OMA:PECINSS EMBL:AY099601 EMBL:AY128842
IPI:IPI00535385 PIR:B84545 RefSeq:NP_565396.1 UniGene:At.12859
PRIDE:Q9ZVX7 EnsemblPlants:AT2G16860.1 GeneID:816187
KEGG:ath:AT2G16860 TAIR:At2g16860 InParanoid:Q9ZVX7
PhylomeDB:Q9ZVX7 ProtClustDB:CLSN2688176 ArrayExpress:Q9ZVX7
Genevestigator:Q9ZVX7 Uniprot:Q9ZVX7
Length = 298
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 68/213 (31%), Positives = 112/213 (52%)
Query: 28 RLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEEQRQKALE-E 86
R K+L E+ LK NE+R+ N +V E ++ + P + K +W+ +++ K L+
Sbjct: 86 RQKKLFELRLKMNEARKSNQTDVGSEKKKMEAPTETKGIS-KQKWLEGRKKKIGKLLDAN 144
Query: 87 GEDYERVKMLNMTVXXXXXXXXXXXXPD-VGFSDYQQATA-RQYNRLVKQMKPDMSKYEE 144
G D + ML+ P G+ + Q T Y + K ++ D+ +Y
Sbjct: 145 GLDMTQAYMLDTQEAAESKYKKWEKEPTPAGWDVFNQKTLYNAYKKRTKNIQVDLEEYNR 204
Query: 145 QKKKLGPAFYGDQKTILQG-LHSDRPEAVDKMVEDLEKQISKREKYSRRRTHNDDADIDY 203
+ P FY + ++ G + +DKM ++L + KR+++SRRR ++ DID
Sbjct: 205 MRAA-DPEFYREASSLQYGKAPKTSQDKIDKMAKELLDREQKRQEFSRRRKFREEKDIDS 263
Query: 204 INERNMKFNKKLERFYGEHTAEIKQNLERGTAI 236
IN+RN FNKK+ER +G++T EIK NLERGTA+
Sbjct: 264 INDRNEHFNKKIERAFGKYTLEIKNNLERGTAL 296
>ASPGD|ASPL0000050771 [details] [associations]
symbol:AN1861 species:162425 "Emericella nidulans"
[GO:0030437 "ascospore formation" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0008380 EMBL:BN001307 GO:GO:0006397
GO:GO:0005681 EMBL:AACD01000029 KO:K12868 eggNOG:NOG147890
HOGENOM:HOG000190170 InterPro:IPR013260 PANTHER:PTHR13264
Pfam:PF08231 RefSeq:XP_659465.1 STRING:Q5BC69
EnsemblFungi:CADANIAT00008515 GeneID:2875390 KEGG:ani:AN1861.2
OMA:PECINSS OrthoDB:EOG4ZGSP5 Uniprot:Q5BC69
Length = 297
Score = 181 (68.8 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 41/87 (47%), Positives = 54/87 (62%)
Query: 153 FYGDQKTILQGLHSDRPE--AVDKMVEDLEKQISKREKYSR-RRTHNDDADIDYINERNM 209
FY TI G +P+ AVDK+V DL K R K R RR ++D D+ YINE+N
Sbjct: 213 FYSTADTI--GFTESKPDRAAVDKLVADLRKAEEVRLKKRRDRRGGDEDGDVTYINEKNK 270
Query: 210 KFNKKLERFYGEHTAEIKQNLERGTAI 236
+FN+KL RFY ++T EI+ + ERGT I
Sbjct: 271 QFNQKLARFYNKYTTEIRDSFERGTMI 297
Score = 109 (43.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 36/128 (28%), Positives = 55/128 (42%)
Query: 27 ERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQL-PNNWEARKRKAEWILKDEEQRQKALE 85
ER +R K + + + + N +E E +R P+ + RK + KA
Sbjct: 57 ERKERFKALQARAKSATERNLKETAAETQRLATDPSLLSSLSRKHAFA---SHNLLKADT 113
Query: 86 E--GEDYERVKMLNMTVXXXXX-----XXXXXXXPDVGFSDYQQATARQYNRLVKQMKPD 138
E GED+ER + + TV DV F DY Q + Y R +++MKPD
Sbjct: 114 EAAGEDFERKRAWDWTVDESEKWDRRMEKKQRHRDDVAFQDYTQDARKVYKRQLREMKPD 173
Query: 139 MSKYEEQK 146
+ YE +K
Sbjct: 174 LEGYENEK 181
>UNIPROTKB|Q521C0 [details] [associations]
symbol:SYF2 "Pre-mRNA-splicing factor SYF2" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0008380 EMBL:CM001233 GO:GO:0006397
GO:GO:0005681 KO:K12868 eggNOG:NOG147890 InterPro:IPR013260
PANTHER:PTHR13264 Pfam:PF08231 OrthoDB:EOG4ZGSP5
RefSeq:XP_003712719.1 STRING:Q521C0 EnsemblFungi:MGG_05180T0
GeneID:2675357 KEGG:mgr:MGG_05180 Uniprot:Q521C0
Length = 291
Score = 169 (64.5 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 29/69 (42%), Positives = 52/69 (75%)
Query: 170 EAVDKMVEDLEK--QISKREKYSRRRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIK 227
EA+D++V D++K ++ +++ +R + +D D+ YIN++N +FN+KL RFY ++TAEI+
Sbjct: 223 EAIDRLVNDMKKAEDVAAKKRKARMAKNGEDDDVTYINDKNKQFNQKLARFYNKYTAEIR 282
Query: 228 QNLERGTAI 236
++ ERGT I
Sbjct: 283 ESFERGTMI 291
Score = 96 (38.9 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 31/127 (24%), Positives = 50/127 (39%)
Query: 26 AERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQL-PNNWEARKRKAEWILKDEEQRQKAL 84
AER+ R + + + S N + E RR+ P+ A R+ I + +
Sbjct: 49 AERMARFRALQARAKTSSDQNLKAATAESRREASDPSQLTALHRRHA-IASHKILKADVE 107
Query: 85 EEGEDYERVKMLNMTVXXXXXXXXXXXXPDVG-----FSDYQQATARQYNRLVKQMKPDM 139
E G D+ER + + T + F DY+ + Y R +K M PDM
Sbjct: 108 ESGGDFERKRAWDWTAEESERWDKRVKKKEAARDNNAFQDYRHEAEKIYKRQLKNMPPDM 167
Query: 140 SKYEEQK 146
+Y + K
Sbjct: 168 ERYAKDK 174
>DICTYBASE|DDB_G0284573 [details] [associations]
symbol:syf2 "putative pre-mRNA-splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0284573 GenomeReviews:CM000153_GR EMBL:AAFI02000066
KO:K12868 eggNOG:NOG147890 InterPro:IPR013260 PANTHER:PTHR13264
Pfam:PF08231 RefSeq:XP_638510.1 EnsemblProtists:DDB0233593
GeneID:8624660 KEGG:ddi:DDB_G0284573 InParanoid:Q54PG4 OMA:NINAMKQ
Uniprot:Q54PG4
Length = 293
Score = 174 (66.3 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 60/246 (24%), Positives = 117/246 (47%)
Query: 7 KYTLDMEAEQKNLTFQEKHAERLKR-LKEIHLKRNESRQLNHQEVVEEDRR--KQLPNNW 63
KY + E + K+ + +R + E+ K ++ + ++ VV+E +R + +
Sbjct: 54 KYLKESENDDKHFIDPLANLTPAQRKVYELRKKLETTKSVIYKSVVDEHKRIHQGAQDEI 113
Query: 64 EARKRKAEWILKDEEQRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQA 123
E +KR + +K EE+ K ++G D ++ ++ N + D D
Sbjct: 114 EEKKRLYKEKIKQEEEEMK--KQGLDPQKERLKNQ-IAEEIKPNKKEKKKDSIVKDKSNT 170
Query: 124 TARQ--YNRLVKQMKPDMSKYE-----------EQKKKLGPAFYGDQKTILQGLHSDRPE 170
+ + YN K++K +M K+ E K+ G + ++ + + R +
Sbjct: 171 YSDEHVYNSYKKRVK-EMEKFHNSEHFKKVVSNEDVKESGDSINNNKYEYGKSIEIPR-D 228
Query: 171 AVDKMVEDLEKQISKREKYSRRRTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNL 230
++ M ++L K R + +R++ ++ DI+YINE N FN+K+ R Y ++T E +QNL
Sbjct: 229 NINAMKQELLKNQENRRSF-KRKSFKEEEDINYINEENRLFNQKVSRAYDKYTVETRQNL 287
Query: 231 ERGTAI 236
ERGTA+
Sbjct: 288 ERGTAL 293
>ZFIN|ZDB-GENE-091204-426 [details] [associations]
symbol:si:ch1073-181h11.4 "si:ch1073-181h11.4"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR006703 Pfam:PF04548 ZFIN:ZDB-GENE-091204-426
GO:GO:0005525 GeneTree:ENSGT00670000097805 EMBL:CU570769
IPI:IPI00866363 Ensembl:ENSDART00000105891 Uniprot:E7F0E5
Length = 1079
Score = 99 (39.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 27/87 (31%), Positives = 53/87 (60%)
Query: 10 LDMEAEQKNLTFQEKHAERLKRLKEIHLKRN--ESRQLNHQEVVEEDRRKQLPNNWEARK 67
++ E ++K + E+ E+LKR +E +K++ E +++ +E V+ ++ K+ + E R+
Sbjct: 643 MEREIQEKQMMIMEEKVEQLKREREELMKKHKEEKKRMMEEERVKHEKEKKRRED-EYRE 701
Query: 68 RKAEWILKDEEQRQKALEEGEDYERVK 94
R E I K EE++++ +EE ERVK
Sbjct: 702 RD-ELIKKHEEEKKRMMEE----ERVK 723
Score = 80 (33.2 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 21/99 (21%), Positives = 48/99 (48%)
Query: 133 KQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKREKYSRR 192
+ M+ + K+E++KK+ Y +++ +++ ++ +++ EK+ +RE R
Sbjct: 715 RMMEEERVKHEKEKKRREDE-YREREELIKKHEEEKKRMMEEERVKHEKEKKRREDEYRE 773
Query: 193 RTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNLE 231
R + DI + + + ER EHT E K+ ++
Sbjct: 774 REERVNRDIKEERKMQEEMRSEKERMMKEHTEEKKREMK 812
>UNIPROTKB|G4NE20 [details] [associations]
symbol:MGG_00840 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001235
InterPro:IPR007019 PANTHER:PTHR14369 Pfam:PF04935
RefSeq:XP_003718139.1 EnsemblFungi:MGG_00840T0 GeneID:2674626
KEGG:mgr:MGG_00840 Uniprot:G4NE20
Length = 553
Score = 117 (46.2 bits), Expect = 0.00023, P = 0.00023
Identities = 55/221 (24%), Positives = 100/221 (45%)
Query: 21 FQEKHAERLKRLKEIHLKRN-ESRQ-LNHQEVVEEDRRKQLPNNWEARKRKAEWILKDEE 78
F+ + A R++ L++ E + + QE++E R+KQ +A K++ + K+E
Sbjct: 292 FKARLAARIEELRKARKADGAEGKPAMTRQELIESRRQKQAQR--KAHKQEVRRLAKEEA 349
Query: 79 QRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQATARQYNRLVKQMKPD 138
R++ EE R + D G +++ A R +QM D
Sbjct: 350 DRKR--EEALASARTSPGSFM--SPLRLGGSDAGSDSGTNNF--AFGRIAFADGQQMAHD 403
Query: 139 MSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAV----DKMVEDLEKQ--ISKREKYSRR 192
+S +++KKK GP+ D KT L L + + DK E LEK+ ++ R +
Sbjct: 404 LSYVKDEKKKKGPS---DPKTALAKLEAQKKRMAGLDEDKRKEVLEKETWLAARRRAEGE 460
Query: 193 RTHNDDADIDYINERNMKFNKKLERFYGEHTAEIKQNL-ER 232
+ +D+ + +R + KK ER +GE A +++ + ER
Sbjct: 461 KIRDDETLLRKAVKRKEQAKKKSEREWGERKAGVEKAIRER 501
>GENEDB_PFALCIPARUM|PF11_0486 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:5833
"Plasmodium falciparum" [GO:0016020 "membrane" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0020007 "apical
complex" evidence=TAS] InterPro:IPR003298 Pfam:PF02430
GO:GO:0009405 GO:GO:0016020 EMBL:AE014186 HSSP:P04268 GO:GO:0020007
RefSeq:XP_001348153.1 ProteinModelPortal:Q8IHP3
EnsemblProtists:PF11_0486:mRNA GeneID:811029 KEGG:pfa:PF11_0486
EuPathDB:PlasmoDB:PF3D7_1147800.1 HOGENOM:HOG000065870
ProtClustDB:PTZ00121 InterPro:IPR021620 Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 12 MEAEQ-KNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKA 70
++AEQ K ++K E+LK+ +E K+ E QL +E + + +QL E K+KA
Sbjct: 1599 IKAEQLKKEEEEKKKVEQLKKKEEEEKKKAE--QLKKEEEENKIKAEQLKKKEEEEKKKA 1656
Query: 71 EWILKDEEQRQKALE----EGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQATAR 126
E + K+EE+ +K E E E+ ++V+ L + + + +
Sbjct: 1657 EELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEE-NKIKVEQLK 1715
Query: 127 QYNRLVKQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKR 186
+ K+ ++ K EE+KKK+ ++K + + ++ EAV + E+L+K+ KR
Sbjct: 1716 KEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKKA-EEIRKEK-EAV--IEEELKKEDEKR 1771
Query: 187 EKYSRRRTHNDDADIDYINERNMK 210
++ + + + I E N K
Sbjct: 1772 RMEVEKKIKDTKDNFENIQEGNNK 1795
>UNIPROTKB|Q8IHP3 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0008150 "biological_process"
evidence=ND] [GO:0020007 "apical complex" evidence=TAS]
InterPro:IPR003298 Pfam:PF02430 GO:GO:0009405 GO:GO:0016020
EMBL:AE014186 HSSP:P04268 GO:GO:0020007 RefSeq:XP_001348153.1
ProteinModelPortal:Q8IHP3 EnsemblProtists:PF11_0486:mRNA
GeneID:811029 KEGG:pfa:PF11_0486 EuPathDB:PlasmoDB:PF3D7_1147800.1
HOGENOM:HOG000065870 ProtClustDB:PTZ00121 InterPro:IPR021620
Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 50/204 (24%), Positives = 96/204 (47%)
Query: 12 MEAEQ-KNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKA 70
++AEQ K ++K E+LK+ +E K+ E QL +E + + +QL E K+KA
Sbjct: 1599 IKAEQLKKEEEEKKKVEQLKKKEEEEKKKAE--QLKKEEEENKIKAEQLKKKEEEEKKKA 1656
Query: 71 EWILKDEEQRQKALE----EGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQATAR 126
E + K+EE+ +K E E E+ ++V+ L + + + +
Sbjct: 1657 EELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEE-NKIKVEQLK 1715
Query: 127 QYNRLVKQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKR 186
+ K+ ++ K EE+KKK+ ++K + + ++ EAV + E+L+K+ KR
Sbjct: 1716 KEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKKA-EEIRKEK-EAV--IEEELKKEDEKR 1771
Query: 187 EKYSRRRTHNDDADIDYINERNMK 210
++ + + + I E N K
Sbjct: 1772 RMEVEKKIKDTKDNFENIQEGNNK 1795
>FB|FBgn0261258 [details] [associations]
symbol:rgn "regeneration" species:7227 "Drosophila
melanogaster" [GO:0030246 "carbohydrate binding" evidence=ISS]
[GO:0042246 "tissue regeneration" evidence=IEP;IMP]
InterPro:IPR001304 Pfam:PF00059 PROSITE:PS50041 SMART:SM00034
EMBL:AE014296 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0042246
GeneTree:ENSGT00700000104144 CTD:9104 ChiTaRS:rgn EMBL:AF145671
RefSeq:NP_649312.1 UniGene:Dm.3135 SMR:Q9Y102
EnsemblMetazoa:FBtr0078346 EnsemblMetazoa:FBtr0333386 GeneID:40368
KEGG:dme:Dmel_CG6014 UCSC:CG6014-RA FlyBase:FBgn0261258
eggNOG:NOG268333 InParanoid:Q9Y102 OMA:KYRWSAR OrthoDB:EOG43N5VG
GenomeRNAi:40368 NextBio:818409 Uniprot:Q9Y102
Length = 800
Score = 117 (46.2 bits), Expect = 0.00053, Sum P(2) = 0.00052
Identities = 52/228 (22%), Positives = 103/228 (45%)
Query: 13 EAEQKNLTFQE--KHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKA 70
E EQK+ Q+ K E R + LK N+ +QL + +E R KQ +++ +KR+
Sbjct: 436 EQEQKDREEQDRLKQEEEQARTHQKELKENQEQQLRELKAKQE-REKQ-ERDYQQQKREH 493
Query: 71 EW-ILKD---EEQRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQATAR 126
E +LK E RQ A +E + R++ + + Q+ R
Sbjct: 494 ELELLKQRQAEADRQHAADEEAEKLRLERIQKQRELEAQQRREREEQRRKQREEQEEQDR 553
Query: 127 QYNRLVKQMKPDMSKYEEQKKKLGPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKR 186
Q + K++ + ++ +++ A +K + + + R E + K+ E L+KQ +R
Sbjct: 554 QNH--AKRLAEEKRLHDLYAERIRLANTEREKQLAEAHEAKRLEEL-KLQEQLKKQEDER 610
Query: 187 EKYSRRRTHNDDA--DIDYINERNMKFNKKLERFYGEHTAEIKQNLER 232
++ RR ++ +++ + E K+L+R + E+ +Q L+R
Sbjct: 611 QEQIRREQEEEEKRLELERLEEARRFEEKELKRLHEENQRREEQKLQR 658
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00052
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 18 NLTFQEKHAERLKRL 32
NLT KHA+R RL
Sbjct: 97 NLTEPGKHADRKLRL 111
>WB|WBGene00006589 [details] [associations]
symbol:tnt-4 species:6239 "Caenorhabditis elegans"
[GO:0006936 "muscle contraction" evidence=IGI] GO:GO:0006936
eggNOG:NOG299534 GeneTree:ENSGT00390000013611 OMA:YENKIAF
HOGENOM:HOG000017659 EMBL:FO081511 GeneID:178679
KEGG:cel:CELE_T08B1.2 CTD:178679 PIR:T30896 RefSeq:NP_503544.2
ProteinModelPortal:O44556 SMR:O44556 STRING:O44556 PaxDb:O44556
PRIDE:O44556 EnsemblMetazoa:T08B1.2a UCSC:T08B1.2a
WormBase:T08B1.2a InParanoid:O44556 NextBio:902100
ArrayExpress:O44556 Uniprot:O44556
Length = 347
Score = 110 (43.8 bits), Expect = 0.00071, P = 0.00071
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 15 EQKNLTFQEKHAERLKRLKEIHLKRNESRQLNHQEVVEEDRRKQLPNNWEARKRKAEWIL 74
E+ + +EK E L++LKE +R +R+ +E E RK+L E R++K E
Sbjct: 70 EKARRSEREKEEEELEKLKEKQAQRKLAREQEEREAAE---RKRLD---EERRQKEE--- 120
Query: 75 KDEEQRQKALEEGEDYERVKMLNMTVXXXXXXXXXXXXPDVGFSDYQQA-TARQYNRLVK 133
+E+R +A EE + E K+ + V + A ++ +V
Sbjct: 121 --QERRARAEEEKKRKEEEKLKKAQMMGGGFPGQQGGRNFVIQKKEESAGVGDRFGNIV- 177
Query: 134 QMKPDMSKYEEQKKKL-GPAFYGDQKTILQGLHSDRPEAVDKMVEDLEKQISKRE--KYS 190
Q K +M +EQ+++ A G +K+I + + P + +++L ++I K E KY
Sbjct: 178 QAKQEMGMTKEQQEEAKSVAMAGIRKSIAEA-STILPNDMKAKIKELHQRICKLEAQKYD 236
Query: 191 RRRTHN-DDADIDYINERN 208
+ H + D+ +NER+
Sbjct: 237 LEKRHERQEYDLKELNERS 255
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 224 0.00099 112 3 11 23 0.46 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 573 (61 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 32.46u 0.08s 32.54t Elapsed: 00:00:12
Total cpu time: 32.46u 0.08s 32.54t Elapsed: 00:00:13
Start: Thu Aug 15 13:57:58 2013 End: Thu Aug 15 13:58:11 2013