Query psy15691
Match_columns 620
No_of_seqs 69 out of 71
Neff 5.0
Searched_HMMs 13730
Date Fri Aug 16 19:02:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15691.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/15691hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j5ja_ g.3.7.2 (A:) Bekm-1 {L 27.3 5.7 0.00042 26.6 -0.1 12 586-597 8-19 (36)
2 d2p6ra1 a.4.5.43 (A:404-488) H 18.2 59 0.0043 24.9 4.3 55 51-120 9-65 (85)
3 d2o4ta1 a.69.4.1 (A:16-105) Un 18.0 1.7E+02 0.012 22.9 7.1 54 94-149 25-79 (90)
4 d2af7a1 a.152.1.2 (A:1-119) Ga 17.3 96 0.007 25.1 5.7 44 51-94 70-115 (119)
5 d1m5ya1 a.223.1.2 (A:25-164,A: 17.0 2.5E+02 0.018 22.9 8.8 74 69-153 44-120 (173)
6 d1f1oa_ a.127.1.1 (A:) Adenylo 15.7 1.7E+02 0.012 28.3 8.2 45 226-270 340-384 (408)
7 d1siga_ a.177.1.1 (A:) Sigma70 14.0 4.2E+02 0.03 23.8 13.3 49 107-155 171-222 (334)
8 d1okkd1 a.24.13.1 (D:21-78) Si 13.2 2.1E+02 0.015 20.6 6.0 17 92-108 18-34 (58)
9 d2fzpa1 d.345.1.1 (A:193-317) 13.1 52 0.0038 27.6 2.7 33 43-79 26-58 (125)
10 d1mqva_ a.24.3.2 (A:) Cytochro 12.2 70 0.0051 26.1 3.3 45 182-226 67-119 (123)
No 1
>d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=27.32 E-value=5.7 Score=26.56 Aligned_cols=12 Identities=50% Similarity=0.935 Sum_probs=8.9
Q ss_pred cchhhccccccc
Q psy15691 586 KKIYQCWPVHFS 597 (620)
Q Consensus 586 ~~~~~~~~~~~~ 597 (620)
.+-||||||--+
T Consensus 8 s~s~qc~pvck~ 19 (36)
T d1j5ja_ 8 SESYQCFPVCKS 19 (36)
T ss_dssp SSGGGHHHHHHH
T ss_pred cCccchhHHHHH
Confidence 457999999643
No 2
>d2p6ra1 a.4.5.43 (A:404-488) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=18.19 E-value=59 Score=24.86 Aligned_cols=55 Identities=9% Similarity=0.077 Sum_probs=42.0
Q ss_pred cccHHHHHHHHHHcCC--ChHHHHHHHHhhhHhHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHhhCC
Q psy15691 51 EPGIFSQLKRYFQAGG--NPEQVIELLSQNYKAVAQMANLVAEWLILGGVNVTEVQAMVENHLKDMILKTFD 120 (620)
Q Consensus 51 Ep~i~~~ik~yi~~gG--~P~~vv~~Ls~~Y~G~aqm~~ll~~WL~~~g~~~~ev~~~~e~~Lk~li~k~FD 120 (620)
||.+-.||-.-|..|+ +.+++++.|+..| .|.|+- . ..++.+++.|+.|...+|=
T Consensus 9 ~~~L~~hllaeIasg~i~s~~e~~~~l~~Tf-~~~q~~-----------~---~l~~~i~~~l~~L~~~~~I 65 (85)
T d2p6ra1 9 ETHLRFHSLSIICDGYAKTLEELEDFFADTF-FFKQNE-----------I---SLSYELERVVRQLENWGMV 65 (85)
T ss_dssp HHHHHHHHHHHHHHTSCSSHHHHHHHHHTST-THHHHC-----------C---CCHHHHHHHHHHHHHTTSE
T ss_pred hHHHHHHHHHHHHcCCCCCHHHHHHHHHHhH-HHHhhh-----------h---cHHHHHHHHHHHHHHCCCc
Confidence 4567778888888876 6799999999999 666752 1 2346688899999888874
No 3
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=18.01 E-value=1.7e+02 Score=22.90 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=37.4
Q ss_pred HhcCCChHHHHHHHHHHHHHHHHhhCCcchhhhhhccCCCChHHHHHHhcC-hhHHH
Q psy15691 94 ILGGVNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEGETPAWLTEMIEH-PTWRS 149 (620)
Q Consensus 94 ~~~g~~~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~~~~P~WL~~mi~~-~~WRs 149 (620)
....++..++..++.+-|--++.--=|-+.+-.||. .++.++-++||++ ++||.
T Consensus 25 ~~~~~~~~~~~~il~dil~lleea~~~G~~v~ev~G--~D~~~f~deli~~~k~~~d 79 (90)
T d2o4ta1 25 KVGPVELNEGIGLLSEILGFFEEGAAAGKGVLDVTG--TDVAAFCDALIGDSKTYAD 79 (90)
T ss_dssp HHSCCSHHHHHHHHHHHHHHHHHHHHTTCCHHHHHC--SCHHHHHHHTTSCSHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHcCCCHHHHhC--CCHHHHHHHHHhhchhhHH
Confidence 444456666666666555555555556777778884 3688999999977 77775
No 4
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=17.34 E-value=96 Score=25.11 Aligned_cols=44 Identities=18% Similarity=0.260 Sum_probs=37.4
Q ss_pred cccHHHHHHHHHHcCCChHHHHHHH--HhhhHhHHHHHHHHHHHHH
Q psy15691 51 EPGIFSQLKRYFQAGGNPEQVIELL--SQNYKAVAQMANLVAEWLI 94 (620)
Q Consensus 51 Ep~i~~~ik~yi~~gG~P~~vv~~L--s~~Y~G~aqm~~ll~~WL~ 94 (620)
++.+-.|++.=+++|-+|+++.+.+ .--|.|++.+.+-+...-.
T Consensus 70 ~~~l~~H~~~Al~~G~t~eEi~e~~~~~~~y~G~P~a~~a~~~~~e 115 (119)
T d2af7a1 70 DDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAINAVLAAKE 115 (119)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 6789999999999999999999977 4679999999887765544
No 5
>d1m5ya1 a.223.1.2 (A:25-164,A:395-427) Porin chaperone SurA, peptide-binding domain {Escherichia coli [TaxId: 562]}
Probab=16.96 E-value=2.5e+02 Score=22.86 Aligned_cols=74 Identities=9% Similarity=0.157 Sum_probs=48.9
Q ss_pred HHHHHHHHhhhHhHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHHHhhCCcchhhhhhccCC-CChHHHHHHhcCh
Q psy15691 69 EQVIELLSQNYKAVAQMANLVAEWLILGG--VNVTEVQAMVENHLKDMILKTFDPKKADTIFTEEG-ETPAWLTEMIEHP 145 (620)
Q Consensus 69 ~~vv~~Ls~~Y~G~aqm~~ll~~WL~~~g--~~~~ev~~~~e~~Lk~li~k~FDp~kaD~ift~~~-~~P~WL~~mi~~~ 145 (620)
..+++.|.+. .|+.......| +++++|...+++..++ ..++.+.+...+...| +..+|.+.+-.+=
T Consensus 44 ~~vl~~LI~~--------~Ll~q~a~~~~i~vs~~ev~~~i~~~~~~---~~~~~~~f~~~L~~~g~~~~~~~~~ir~~l 112 (173)
T d1m5ya1 44 HQIMERLIMD--------QIILQMGQKMGVKISDEQLDQAIANIAKQ---NNMTLDQMRSRLAYDGLNYNTYRNQIRKEM 112 (173)
T ss_dssp HHHHHHHHHH--------HHHHHHHHHTTCCCCHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH--------HHHHHHHHHhcccCCHHHHHHHHHHHHHH---cCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4566666665 45666666666 5677777776554332 3468888998898888 5556666666777
Q ss_pred hHHHHHHH
Q psy15691 146 TWRSLIYR 153 (620)
Q Consensus 146 ~WRsliy~ 153 (620)
.|.+++-.
T Consensus 113 ~~~~l~~~ 120 (173)
T d1m5ya1 113 IISEVRNN 120 (173)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78887654
No 6
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]}
Probab=15.66 E-value=1.7e+02 Score=28.26 Aligned_cols=45 Identities=16% Similarity=0.029 Sum_probs=34.9
Q ss_pred chhHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHhcCCCchhH
Q psy15691 226 QHTYVYSQVLLQVLSLESKGGSKVKRLAQEITKCAQQSGHDVTPI 270 (620)
Q Consensus 226 ehTYlyaQ~lL~~L~~e~~g~~~~~rlsQele~~A~~~g~~v~~i 270 (620)
...+++++.+...|.+..-+.....++..++-+.|..+|.+...+
T Consensus 340 ~~~~~~a~~~~~~Lv~~gl~~~~Ah~~v~~~~~~a~~~~~~l~e~ 384 (408)
T d1f1oa_ 340 TLGLIYSQRVLLALIDTGLTREEAYDTVQPKAMEAWEKQVPFREL 384 (408)
T ss_pred hcCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 455889999999998764556677888888888888888776554
No 7
>d1siga_ a.177.1.1 (A:) Sigma70 {Escherichia coli [TaxId: 562]}
Probab=13.96 E-value=4.2e+02 Score=23.82 Aligned_cols=49 Identities=16% Similarity=0.387 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhh--CCcchhhhhhccCCCChHHHHHHhc-ChhHHHHHHHHH
Q psy15691 107 VENHLKDMILKT--FDPKKADTIFTEEGETPAWLTEMIE-HPTWRSLIYRLA 155 (620)
Q Consensus 107 ~e~~Lk~li~k~--FDp~kaD~ift~~~~~P~WL~~mi~-~~~WRsliy~La 155 (620)
.|..+.++..+. -+.+.+-..|......+.|++.+++ ++.|...+-+..
T Consensus 171 ~E~~l~~l~~~~~~~~r~~fik~~~~~e~~~~wl~~~~k~~~~~~~~l~~~~ 222 (334)
T d1siga_ 171 QERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS 222 (334)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHTTTCSSGGGTHHHHTTCSHHHHHGGGTH
T ss_pred HHHHHHHHHHhccccchHHHHHHHhhhhhhHHHHHHHHhhchhHHHHHHhhH
Confidence 345566665553 4555666778877789999999986 466777654433
No 8
>d1okkd1 a.24.13.1 (D:21-78) Signal recognition particle receptor, FtsY {Thermus aquaticus [TaxId: 271]}
Probab=13.23 E-value=2.1e+02 Score=20.57 Aligned_cols=17 Identities=12% Similarity=0.343 Sum_probs=9.9
Q ss_pred HHHhcCCChHHHHHHHH
Q psy15691 92 WLILGGVNVTEVQAMVE 108 (620)
Q Consensus 92 WL~~~g~~~~ev~~~~e 108 (620)
=|..++++.+..+.+++
T Consensus 18 ~Li~ADvGv~tt~~ii~ 34 (58)
T d1okkd1 18 ALLAADVGLSATEEILQ 34 (58)
T ss_dssp HHHHTTCCHHHHHHHHH
T ss_pred HHHHcccCHHHHHHHHH
Confidence 35566666666655543
No 9
>d2fzpa1 d.345.1.1 (A:193-317) E3 ubiquitin-protein ligase NRDP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.06 E-value=52 Score=27.62 Aligned_cols=33 Identities=30% Similarity=0.557 Sum_probs=28.2
Q ss_pred cCCCCccccccHHHHHHHHHHcCCChHHHHHHHHhhh
Q psy15691 43 FSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELLSQNY 79 (620)
Q Consensus 43 l~~~DaIMEp~i~~~ik~yi~~gG~P~~vv~~Ls~~Y 79 (620)
.|+||..|. ..||+-+++.|-|.-+++.|.|+-
T Consensus 26 ISTPD~~l~----~~ir~~L~~sgCP~hiln~l~e~c 58 (125)
T d2fzpa1 26 ISTPDAVLQ----AVIKRSLVESGCPASIVNELIENA 58 (125)
T ss_dssp ESSCCHHHH----HHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred ccCccHHHH----HHHHHHhhhcCCChHHHHHHHHhh
Confidence 678888875 468889999999999999999984
No 10
>d1mqva_ a.24.3.2 (A:) Cytochrome c' {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=12.18 E-value=70 Score=26.06 Aligned_cols=45 Identities=7% Similarity=0.182 Sum_probs=31.0
Q ss_pred chhhHhhhHHHHHHHHHHHHHHHhc------CcchHHHhHHHHhhhh--hcCc
Q psy15691 182 SISTAAQQIEVFSRVLKTSISNFLE------SSDDWQSSVEECAKMV--CHGQ 226 (620)
Q Consensus 182 svstaa~~~~VF~rvL~~~i~~~l~------~~e~~~~~~~el~km~--C~se 226 (620)
+.+.+|++++-|............. +.+.+..++..+.+.| ||..
T Consensus 67 A~p~IW~~~~~F~~~~~~~~~~a~~laa~~~d~~~~~~a~~~vg~tCksCH~~ 119 (123)
T d1mqva_ 67 ALPKIFEDKAKFDDLFAKLAAAATAAQGTIKDEASLKANIGGVLGNCKSCHDD 119 (123)
T ss_dssp BCGGGGGSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHhCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4456899999999887544333321 2566778888888887 7764
Done!