BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15694
(81 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307184650|gb|EFN70979.1| Negative elongation factor D [Camponotus floridanus]
Length = 579
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/75 (66%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYD++++ W +M D G+D +NPQEVLNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1 MESDYDEDRSG-WGDEMNRSDDCSGEDTFDNPQEVLNECLDKFKTPDYIMEPGIFAQLKR 59
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 60 YFQAGGNPEQVIELL 74
>gi|380011013|ref|XP_003689608.1| PREDICTED: negative elongation factor D-like [Apis florea]
Length = 580
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYD+++ W ++M + G+D +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1 MESDYDEDRG-TWTEEMTRTEDCSGEDNFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 60 YFQAGGNPEQVIELL 74
>gi|328716546|ref|XP_001944110.2| PREDICTED: negative elongation factor D-like [Acyrthosiphon
pisum]
Length = 574
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 51/75 (68%), Positives = 60/75 (80%), Gaps = 3/75 (4%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DDYD+ + RWD D VDV++D DD +ENP+E L +CLEKFS+ DYIMEPGIFSQLKR
Sbjct: 1 MEDDYDEYR--RWDGD-VDVEADDNDDILENPEETLTQCLEKFSSADYIMEPGIFSQLKR 57
Query: 61 YFQAGGNPEQVIELM 75
YFQ GG PE VIEL+
Sbjct: 58 YFQVGGTPEHVIELL 72
>gi|340722089|ref|XP_003399442.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor D-like
[Bombus terrestris]
Length = 580
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYD+++ W ++M + G+D +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1 MESDYDEDRG-AWTEEMTRSEDCLGEDSFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 60 YFQAGGNPEQVIELL 74
>gi|350420164|ref|XP_003492420.1| PREDICTED: negative elongation factor D-like isoform 1 [Bombus
impatiens]
gi|350420167|ref|XP_003492421.1| PREDICTED: negative elongation factor D-like isoform 2 [Bombus
impatiens]
Length = 580
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 48/75 (64%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYD+++ W ++M + G+D +NPQE+LNECL+KF TPDYIMEPGIF+QLKR
Sbjct: 1 MEMDYDEDRG-AWTEEMTRSEECIGEDSFDNPQEILNECLDKFKTPDYIMEPGIFAQLKR 59
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 60 YFQAGGNPEQVIELL 74
>gi|332021804|gb|EGI62150.1| Negative elongation factor D [Acromyrmex echinatior]
Length = 587
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYDD+ D+ D G+D +NPQEVLNECL+KF T DYIMEPGIF QLKR
Sbjct: 7 METDYDDDHGGWRDERNRSTDEYSGEDTFDNPQEVLNECLDKFKTADYIMEPGIFVQLKR 66
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 67 YFQAGGNPEQVIELL 81
>gi|307208263|gb|EFN85695.1| Negative elongation factor D [Harpegnathos saltator]
Length = 582
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/72 (66%), Positives = 58/72 (80%)
Query: 4 DYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQ 63
DYD++++ D+ + D G +D ENP+EVLNECL+KF TPDYIMEPGIF QLKRYFQ
Sbjct: 5 DYDEDRSSWRDEIGRNSDEGGSEDVPENPKEVLNECLDKFKTPDYIMEPGIFVQLKRYFQ 64
Query: 64 AGGNPEQVIELM 75
AGGNPEQVIEL+
Sbjct: 65 AGGNPEQVIELL 76
>gi|383864711|ref|XP_003707821.1| PREDICTED: negative elongation factor D-like [Megachile
rotundata]
Length = 226
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 57/75 (76%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DY D+ + D+ + GG+D +NPQE+LNECL KF TPDYIMEPGIF+QLKR
Sbjct: 1 MEPDYSDDHSGWTDEITRTAEDGGGEDSFDNPQEILNECLNKFKTPDYIMEPGIFTQLKR 60
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 61 YFQAGGNPEQVIELL 75
>gi|322786011|gb|EFZ12627.1| hypothetical protein SINV_15376 [Solenopsis invicta]
Length = 329
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYDD+++ D+ +D G+D +NPQEVLNECL+KF T DYIMEPGIF+QLKR
Sbjct: 1 MESDYDDDRSGWGDEMNRSIDECSGEDTFDNPQEVLNECLDKFKTADYIMEPGIFAQLKR 60
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPEQVIEL+
Sbjct: 61 YFQAGGNPEQVIELL 75
>gi|193211439|ref|NP_001123224.1| negative elongation factor D [Nasonia vitripennis]
Length = 580
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M + +E ++ W+ DM D G+DP ENPQ+VL ECL+KF+TPDYIMEPGIF+QLKR
Sbjct: 1 MEPSFGEEHSN-WE-DMNRGDDISGEDPSENPQQVLKECLDKFNTPDYIMEPGIFTQLKR 58
Query: 61 YFQAGGNPEQVIELM 75
YFQAGGNPE VIEL+
Sbjct: 59 YFQAGGNPETVIELL 73
>gi|357628258|gb|EHJ77648.1| negative elongation factor D [Danaus plexippus]
Length = 574
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 1 MNDDYDDEQTHRWD-QDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M YD+E+ W+ Q+ + DG +D ++NP+EVL ECLEKF TPDYIMEPGIF QLK
Sbjct: 1 MPSQYDEERV--WEGQNQNHYEDDGTEDVIDNPEEVLQECLEKFKTPDYIMEPGIFGQLK 58
Query: 60 RYFQAGGNPEQVIELMIID 78
RYFQAGGNPEQVIE + I+
Sbjct: 59 RYFQAGGNPEQVIEQLSIN 77
>gi|157167599|ref|XP_001655264.1| hypothetical protein AaeL_AAEL002450 [Aedes aegypti]
gi|108882122|gb|EAT46347.1| AAEL002450-PA [Aedes aegypti]
Length = 586
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/52 (80%), Positives = 47/52 (90%)
Query: 21 DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVI 72
+ DG D+P+ENPQEVLNECL KF+T DYIMEPGIF+QLKRYFQAGG PEQVI
Sbjct: 24 EPDGHDEPLENPQEVLNECLSKFATSDYIMEPGIFTQLKRYFQAGGTPEQVI 75
>gi|242022458|ref|XP_002431657.1| Negative elongation factor D, putative [Pediculus humanus
corporis]
gi|212516965|gb|EEB18919.1| Negative elongation factor D, putative [Pediculus humanus
corporis]
Length = 580
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/47 (89%), Positives = 46/47 (97%)
Query: 29 MENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ENPQEVL ECLEKFSTPDYIMEPGIF+QLKRYFQAGGNPEQVI+L+
Sbjct: 27 LENPQEVLTECLEKFSTPDYIMEPGIFTQLKRYFQAGGNPEQVIDLL 73
>gi|91078898|ref|XP_973390.1| PREDICTED: similar to TH1 CG9984-PA [Tribolium castaneum]
gi|270004155|gb|EFA00603.1| hypothetical protein TcasGA2_TC003474 [Tribolium castaneum]
Length = 578
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 58/74 (78%), Gaps = 5/74 (6%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M+++YD+ WD D +D DSD GD+ ENP++VL EC EKFST DYIMEPGIFSQLK
Sbjct: 1 MDEEYDERN---WDTVDRLDNDSDAGDE-TENPEQVLKECAEKFSTSDYIMEPGIFSQLK 56
Query: 60 RYFQAGGNPEQVIE 73
RYFQ+GGNP QVIE
Sbjct: 57 RYFQSGGNPLQVIE 70
>gi|170053135|ref|XP_001862536.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873791|gb|EDS37174.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 602
Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 23 DGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVI 72
DG D+P+ENPQEVL ECL KF+T DYIMEPGIF+QLKRYFQAGG PEQVI
Sbjct: 43 DGHDEPLENPQEVLGECLSKFATNDYIMEPGIFAQLKRYFQAGGTPEQVI 92
>gi|170056569|ref|XP_001864089.1| Th1l protein [Culex quinquefasciatus]
gi|167876186|gb|EDS39569.1| Th1l protein [Culex quinquefasciatus]
Length = 422
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 45/50 (90%)
Query: 23 DGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVI 72
DG D+P+ENPQEVL ECL KF+T DYIMEPGIF+QLKRYFQAGG PEQVI
Sbjct: 43 DGHDEPLENPQEVLGECLSKFATNDYIMEPGIFAQLKRYFQAGGTPEQVI 92
>gi|312382041|gb|EFR27625.1| hypothetical protein AND_05547 [Anopheles darlingi]
Length = 604
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/72 (58%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M ++YDDE W D + DG ++ ++NPQEVL ECL F+TPDYIMEP IF LKR
Sbjct: 1 MEEEYDDEA---WVGRKPDAEDDGLEEQLDNPQEVLRECLTTFATPDYIMEPTIFGLLKR 57
Query: 61 YFQAGGNPEQVI 72
YFQAGG PEQ I
Sbjct: 58 YFQAGGTPEQFI 69
>gi|321474679|gb|EFX85644.1| hypothetical protein DAPPUDRAFT_313834 [Daphnia pulex]
Length = 584
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 2 NDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRY 61
N D+ + R D +M D SD D MENP EVL ECL+ F T DYIMEPGIF+QLKRY
Sbjct: 7 NQDWGESSGMRGDSEMGD--SDNEDQYMENPAEVLEECLQTFKTQDYIMEPGIFNQLKRY 64
Query: 62 FQAGGNPEQVIELM 75
F GG+P VIEL+
Sbjct: 65 FTVGGSPAHVIELL 78
>gi|427789127|gb|JAA60015.1| Putative negative elongation factor c/d [Rhipicephalus
pulchellus]
Length = 593
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/74 (52%), Positives = 57/74 (77%), Gaps = 4/74 (5%)
Query: 3 DDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYF 62
+++D+E+T W++ D DS G+D + + EC+EKFS+ D+IMEPGIF+QLKRYF
Sbjct: 2 EEFDEERT--WEEG--DADSPLGEDQEALVEGIQQECIEKFSSLDFIMEPGIFAQLKRYF 57
Query: 63 QAGGNPEQVIELMI 76
QAGGNPEQV++L++
Sbjct: 58 QAGGNPEQVVDLLL 71
>gi|195134995|ref|XP_002011921.1| GI14305 [Drosophila mojavensis]
gi|193909175|gb|EDW08042.1| GI14305 [Drosophila mojavensis]
Length = 578
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M +YDD W Q S + +NPQ+ + ECLEKF TPDYIMEPGIF+QLKR
Sbjct: 1 MEVEYDDSG---W-QGRAKQQSSAEETHEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKR 56
Query: 61 YFQAGGNPEQVIELM 75
YFQ+GG+PE+VI ++
Sbjct: 57 YFQSGGSPEEVISML 71
>gi|194770138|ref|XP_001967154.1| GF19568 [Drosophila ananassae]
gi|190619274|gb|EDV34798.1| GF19568 [Drosophila ananassae]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M DYDD W Q ++ + +NPQ+ + ECLE+F TPDYIMEPGIF+QLKR
Sbjct: 1 MEVDYDDSG---W-QGRAKTQNNAEEIQEDNPQKTIQECLERFLTPDYIMEPGIFTQLKR 56
Query: 61 YFQAGGNPEQVIELM 75
YFQ+GG+PE+VI ++
Sbjct: 57 YFQSGGSPEEVISML 71
>gi|194893822|ref|XP_001977946.1| GG19326 [Drosophila erecta]
gi|190649595|gb|EDV46873.1| GG19326 [Drosophila erecta]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEEMLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|18860069|ref|NP_573123.1| TH1 [Drosophila melanogaster]
gi|38372289|sp|Q24134.2|NELFD_DROME RecName: Full=Negative elongation factor D
gi|6634072|emb|CAB64258.1| putative TH1 protein (66kDa) [Drosophila melanogaster]
gi|6634074|emb|CAB64259.1| putative TH1 protein (66kDa) [Drosophila melanogaster]
gi|7293221|gb|AAF48603.1| TH1 [Drosophila melanogaster]
gi|15292225|gb|AAK93381.1| LD42626p [Drosophila melanogaster]
gi|220946378|gb|ACL85732.1| TH1-PA [synthetic construct]
gi|220955994|gb|ACL90540.1| TH1-PA [synthetic construct]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEETLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195479211|ref|XP_002100806.1| GE15972 [Drosophila yakuba]
gi|194188330|gb|EDX01914.1| GE15972 [Drosophila yakuba]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEEMLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195567104|ref|XP_002107111.1| GD15751 [Drosophila simulans]
gi|194204511|gb|EDX18087.1| GD15751 [Drosophila simulans]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEETLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195351436|ref|XP_002042240.1| GM13403 [Drosophila sechellia]
gi|194124083|gb|EDW46126.1| GM13403 [Drosophila sechellia]
Length = 578
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEETLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195167303|ref|XP_002024473.1| GL15890 [Drosophila persimilis]
gi|194107871|gb|EDW29914.1| GL15890 [Drosophila persimilis]
Length = 533
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 27 NPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195393568|ref|XP_002055426.1| GJ19362 [Drosophila virilis]
gi|194149936|gb|EDW65627.1| GJ19362 [Drosophila virilis]
Length = 578
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 27 NPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195058395|ref|XP_001995444.1| GH22626 [Drosophila grimshawi]
gi|193899650|gb|EDV98516.1| GH22626 [Drosophila grimshawi]
Length = 578
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 27 NPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|998352|gb|AAC46880.1| TH1, partial [Drosophila melanogaster]
gi|1583573|prf||2121260A TH1 protein
Length = 346
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 46/58 (79%), Gaps = 4/58 (6%)
Query: 22 SDGGDDPME----NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ G +P E NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 14 AKGQTNPEETLEDNPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|125982303|ref|XP_001355068.1| GA22166 [Drosophila pseudoobscura pseudoobscura]
gi|54643380|gb|EAL32124.1| GA22166 [Drosophila pseudoobscura pseudoobscura]
Length = 578
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 27 NPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|195447598|ref|XP_002071285.1| GK25710 [Drosophila willistoni]
gi|194167370|gb|EDW82271.1| GK25710 [Drosophila willistoni]
Length = 578
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 41/45 (91%)
Query: 31 NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
NPQ+ + ECLEKF TPDYIMEPGIF+QLKRYFQ+GG+PE+VI ++
Sbjct: 27 NPQKTIQECLEKFLTPDYIMEPGIFTQLKRYFQSGGSPEEVISML 71
>gi|241998178|ref|XP_002433732.1| negative elongation factor C/D, putative [Ixodes scapularis]
gi|215495491|gb|EEC05132.1| negative elongation factor C/D, putative [Ixodes scapularis]
Length = 576
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 14/75 (18%)
Query: 7 DEQTHRWDQDMVDVDSDGGDDPMENPQEVL-----NECLEKFSTPDYIMEPGIFSQLKRY 61
DE+ W++ GD P+ QE L EC+EKFS+ D+IMEPGIF+QLKRY
Sbjct: 6 DEERGGWEE---------GDSPLGEDQEALVERIQQECIEKFSSLDFIMEPGIFAQLKRY 56
Query: 62 FQAGGNPEQVIELMI 76
FQAGGNPEQV++L++
Sbjct: 57 FQAGGNPEQVVDLLL 71
>gi|347963730|ref|XP_310712.4| AGAP000391-PA [Anopheles gambiae str. PEST]
gi|333467060|gb|EAA06287.4| AGAP000391-PA [Anopheles gambiae str. PEST]
Length = 585
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/48 (68%), Positives = 40/48 (83%)
Query: 28 PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
P ENP+ V+++CL+ FS+ DYIMEPGIF QLKRYFQAGG PEQVI +
Sbjct: 30 PSENPKAVVSDCLQLFSSVDYIMEPGIFVQLKRYFQAGGTPEQVINTL 77
>gi|326932140|ref|XP_003212178.1| PREDICTED: negative elongation factor D-like [Meleagris
gallopavo]
Length = 569
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL+KFSTPDYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 21 EVQQECLKKFSTPDYIMEPSIFNTLKRYFQAGGSPENVIQLL 62
>gi|449274245|gb|EMC83528.1| Negative elongation factor D, partial [Columba livia]
Length = 562
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL+KFSTPDYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 14 EVQQECLKKFSTPDYIMEPSIFNTLKRYFQAGGSPENVIQLL 55
>gi|57529395|ref|NP_001006294.1| TH1-like [Gallus gallus]
gi|53135002|emb|CAG32385.1| hypothetical protein RCJMB04_24d13 [Gallus gallus]
Length = 583
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL+KFSTPDYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 35 EVQQECLKKFSTPDYIMEPSIFNTLKRYFQAGGSPENVIQLL 76
>gi|449486291|ref|XP_002195509.2| PREDICTED: negative elongation factor C/D [Taeniopygia guttata]
Length = 584
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL+KFSTPDYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 36 EVQQECLKKFSTPDYIMEPSIFNTLKRYFQAGGSPENVIQLL 77
>gi|119595862|gb|EAW75456.1| TH1-like (Drosophila), isoform CRA_d [Homo sapiens]
Length = 547
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M++DY D+ + D G+ E+ EV ECL KFST DYIMEP IF+ LKR
Sbjct: 1 MDEDYYGSAAEWGDEADGGQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKR 58
Query: 61 YFQAGGNPEQVIELM 75
YFQAGG+PE VI+L+
Sbjct: 59 YFQAGGSPENVIQLL 73
>gi|354468713|ref|XP_003496796.1| PREDICTED: negative elongation factor D [Cricetulus griseus]
Length = 589
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 21 DSDGG----DDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG D E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 24 EADGGQQEDDSGGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 82
>gi|344237125|gb|EGV93228.1| Negative elongation factor D [Cricetulus griseus]
Length = 580
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 21 DSDGG----DDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG D E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 15 EADGGQQEDDSGGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 73
>gi|444730806|gb|ELW71179.1| Negative elongation factor D [Tupaia chinensis]
Length = 681
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 16 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 61
>gi|119595857|gb|EAW75451.1| TH1-like (Drosophila), isoform CRA_a [Homo sapiens]
Length = 580
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M++DY D+ + D G+ E+ EV ECL KFST DYIMEP IF+ LKR
Sbjct: 1 MDEDYYGSAAEWGDEADGGQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKR 58
Query: 61 YFQAGGNPEQVIELM 75
YFQAGG+PE VI+L+
Sbjct: 59 YFQAGGSPENVIQLL 73
>gi|296200823|ref|XP_002747766.1| PREDICTED: negative elongation factor D-like isoform 1
[Callithrix jacchus]
Length = 590
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYFGSAAESGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|13905325|gb|AAH06959.1| TH1-like homolog (Drosophila) [Mus musculus]
Length = 582
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDP--MENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD +E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 15 EADGGQHQEDDSGEVEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 74
Query: 75 M 75
+
Sbjct: 75 L 75
>gi|76633005|ref|XP_592881.2| PREDICTED: negative elongation factor D isoform 1 [Bos taurus]
gi|297481831|ref|XP_002692460.1| PREDICTED: negative elongation factor D isoform 1 [Bos taurus]
gi|296480900|tpg|DAA23015.1| TPA: TH1-like isoform 1 [Bos taurus]
Length = 589
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M++DY D+ + D G+ E+ EV ECL KFST DYIMEP IF+ LKR
Sbjct: 10 MDEDYFGNAAEWGDEAEGGQEDDYGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKR 67
Query: 61 YFQAGGNPEQVIELM 75
YFQAGG+PE VI+L+
Sbjct: 68 YFQAGGSPENVIQLL 82
>gi|403282661|ref|XP_003932760.1| PREDICTED: negative elongation factor D-like [Saimiri boliviensis
boliviensis]
Length = 682
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 21 DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ D G+ E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 123 EDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 175
>gi|67968932|dbj|BAE00823.1| unnamed protein product [Macaca fascicularis]
Length = 599
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGNAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|297259463|ref|XP_001084700.2| PREDICTED: negative elongation factor D [Macaca mulatta]
Length = 583
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGNAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|6841482|gb|AAF29094.1|AF161479_1 HSPC130 [Homo sapiens]
Length = 473
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|402882118|ref|XP_003904599.1| PREDICTED: negative elongation factor D-like [Papio anubis]
Length = 599
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGNAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|114682835|ref|XP_001139660.1| PREDICTED: negative elongation factor C/D isoform 2 [Pan
troglodytes]
gi|410302560|gb|JAA29880.1| TH1-like [Pan troglodytes]
Length = 599
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|355562995|gb|EHH19557.1| Negative elongation factor C/D [Macaca mulatta]
gi|355784355|gb|EHH65206.1| Negative elongation factor C/D [Macaca fascicularis]
Length = 660
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 21 DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ D G+ E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 10 EDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 62
>gi|426392301|ref|XP_004062494.1| PREDICTED: negative elongation factor D-like [Gorilla gorilla
gorilla]
Length = 599
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|332256896|ref|XP_003277554.1| PREDICTED: negative elongation factor D-like [Nomascus
leucogenys]
Length = 599
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|399788586|ref|NP_945327.2| negative elongation factor C/D [Homo sapiens]
gi|119595858|gb|EAW75452.1| TH1-like (Drosophila), isoform CRA_b [Homo sapiens]
gi|119595859|gb|EAW75453.1| TH1-like (Drosophila), isoform CRA_b [Homo sapiens]
gi|119595860|gb|EAW75454.1| TH1-like (Drosophila), isoform CRA_b [Homo sapiens]
Length = 599
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|395829278|ref|XP_003787787.1| PREDICTED: negative elongation factor D-like isoform 1 [Otolemur
garnettii]
Length = 599
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 19 MDEDYFGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 76
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 77 RYFQAGGSPENVIQLL 92
>gi|10436017|dbj|BAB14729.1| unnamed protein product [Homo sapiens]
Length = 590
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|197098852|ref|NP_001124679.1| negative elongation factor D [Pongo abelii]
gi|75042619|sp|Q5RFA0.1|NELFD_PONAB RecName: Full=Negative elongation factor D; Short=NELF-D;
AltName: Full=TH1-like protein
gi|55725386|emb|CAH89557.1| hypothetical protein [Pongo abelii]
Length = 590
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|410225022|gb|JAA09730.1| TH1-like [Pan troglodytes]
gi|410254676|gb|JAA15305.1| TH1-like [Pan troglodytes]
Length = 590
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|38372376|sp|Q8IXH7.2|NELFD_HUMAN RecName: Full=Negative elongation factor C/D; Short=NELF-C/D;
AltName: Full=TH1-like protein
gi|15928974|gb|AAH14952.1| TH1-like (Drosophila) [Homo sapiens]
gi|194373643|dbj|BAG56917.1| unnamed protein product [Homo sapiens]
gi|261860746|dbj|BAI46895.1| TH1-like protein [synthetic construct]
gi|325464315|gb|ADZ15928.1| TH1-like (Drosophila) [synthetic construct]
Length = 590
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 10 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 67
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 68 RYFQAGGSPENVIQLL 83
>gi|6634424|emb|CAB64339.1| putative TH1 protein [Homo sapiens]
Length = 581
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 1 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 58
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 59 RYFQAGGSPENVIQLL 74
>gi|7022495|dbj|BAA91618.1| unnamed protein product [Homo sapiens]
Length = 581
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 1 MNDDYDDEQTHRWDQ-DMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLK 59
M++DY D+ D + D G+ E+ EV ECL KFST DYIMEP IF+ LK
Sbjct: 1 MDEDYYGSAAEWGDEADGGQQEDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLK 58
Query: 60 RYFQAGGNPEQVIELM 75
RYFQAGG+PE VI+L+
Sbjct: 59 RYFQAGGSPENVIQLL 74
>gi|327285284|ref|XP_003227364.1| PREDICTED: negative elongation factor D-like [Anolis
carolinensis]
Length = 582
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 30 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 75
>gi|397479143|ref|XP_003810888.1| PREDICTED: negative elongation factor D-like [Pan paniscus]
Length = 574
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 41/61 (67%), Gaps = 5/61 (8%)
Query: 15 QDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
Q D +G DD EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 12 QQQEDDSGEGEDD-----AEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 66
Query: 75 M 75
+
Sbjct: 67 L 67
>gi|348552532|ref|XP_003462081.1| PREDICTED: negative elongation factor D-like [Cavia porcellus]
Length = 591
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGI 54
M +DY T W ++ +DGG DD E + EV ECL KFST DYIMEP I
Sbjct: 10 MAEDYFG-NTAEWSEE-----ADGGQPQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSI 63
Query: 55 FSQLKRYFQAGGNPEQVIELM 75
F+ LKRYFQAGG+PE VI+L+
Sbjct: 64 FNTLKRYFQAGGSPENVIQLL 84
>gi|410953472|ref|XP_003983394.1| PREDICTED: negative elongation factor D-like [Felis catus]
Length = 621
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 69 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 114
>gi|390462751|ref|XP_003732898.1| PREDICTED: negative elongation factor D-like isoform 2
[Callithrix jacchus]
Length = 591
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 1 MNDDYDDEQTHRWD-----QDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIF 55
M++DY D Q D +G DD EV ECL KFST DYIMEP IF
Sbjct: 10 MDEDYFGSAAESGDEADGGQQQEDDSGEGEDDA-----EVQQECLHKFSTRDYIMEPSIF 64
Query: 56 SQLKRYFQAGGNPEQVIELM 75
+ LKRYFQAGG+PE VI+L+
Sbjct: 65 NTLKRYFQAGGSPENVIQLL 84
>gi|301759443|ref|XP_002915581.1| PREDICTED: negative elongation factor C/D-like [Ailuropoda
melanoleuca]
Length = 570
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 18 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 63
>gi|431894549|gb|ELK04349.1| Negative elongation factor D [Pteropus alecto]
Length = 573
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 21 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 66
>gi|74204747|dbj|BAE35440.1| unnamed protein product [Mus musculus]
Length = 607
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83
Query: 75 M 75
+
Sbjct: 84 L 84
>gi|162416106|sp|A5GFY4.1|NELFD_PIG RecName: Full=Negative elongation factor D; Short=NELF-D;
AltName: Full=TH1-like protein
gi|147223319|emb|CAN13212.1| TH1-like (Drosophila) [Sus scrofa]
Length = 590
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 44/60 (73%), Gaps = 5/60 (8%)
Query: 21 DSDGG---DD--PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG DD E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 24 EADGGQQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 83
>gi|6688746|emb|CAB65254.1| putative TH1 protein [Mus musculus]
Length = 582
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 15 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 74
Query: 75 M 75
+
Sbjct: 75 L 75
>gi|426241203|ref|XP_004014481.1| PREDICTED: negative elongation factor D-like, partial [Ovis
aries]
Length = 561
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 9 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 54
>gi|91982765|ref|NP_065605.2| negative elongation factor D [Mus musculus]
gi|38372379|sp|Q922L6.2|NELFD_MOUSE RecName: Full=Negative elongation factor D; Short=NELF-D;
AltName: Full=TH1-like protein
Length = 591
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83
Query: 75 M 75
+
Sbjct: 84 L 84
>gi|6688744|emb|CAB65253.1| putative TH1 protein [Mus musculus]
Length = 582
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 15 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 74
Query: 75 M 75
+
Sbjct: 75 L 75
>gi|149734242|ref|XP_001490298.1| PREDICTED: negative elongation factor C/D [Equus caballus]
Length = 569
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 17 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 62
>gi|6688742|emb|CAB65252.1| putative TH1 protein [Mus musculus]
gi|12845746|dbj|BAB26880.1| unnamed protein product [Mus musculus]
gi|21619276|gb|AAH31747.1| TH1-like homolog (Drosophila) [Mus musculus]
gi|26340162|dbj|BAC33744.1| unnamed protein product [Mus musculus]
gi|148674729|gb|EDL06676.1| TH1-like homolog (Drosophila) [Mus musculus]
Length = 582
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 15 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 74
Query: 75 M 75
+
Sbjct: 75 L 75
>gi|440891623|gb|ELR45202.1| Negative elongation factor D, partial [Bos grunniens mutus]
Length = 563
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 11 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 56
>gi|281348428|gb|EFB24012.1| hypothetical protein PANDA_003572 [Ailuropoda melanoleuca]
Length = 562
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 10 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 55
>gi|291411142|ref|XP_002721853.1| PREDICTED: TH1-like protein [Oryctolagus cuniculus]
Length = 588
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 21 DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ D G+ E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 29 EDDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 81
>gi|404247429|ref|NP_001258183.1| uncharacterized protein LOC679203 [Rattus norvegicus]
gi|149029993|gb|EDL85085.1| rCG40850 [Rattus norvegicus]
Length = 591
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 21 DSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ D G+ E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 32 EEDSGEG--EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 84
>gi|345789753|ref|XP_534468.3| PREDICTED: negative elongation factor D [Canis lupus familiaris]
Length = 586
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 34 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 79
>gi|147223320|emb|CAN13213.1| TH1-like (Drosophila) [Sus scrofa]
Length = 291
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 43/59 (72%), Gaps = 4/59 (6%)
Query: 21 DSDGGDD----PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG + E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 9 EADGGQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 67
>gi|165973432|ref|NP_001107170.1| negative elongation factor D [Sus scrofa]
gi|147223318|emb|CAN13211.1| TH1-like (Drosophila) [Sus scrofa]
Length = 591
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DD--PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24 EADGGQQQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83
Query: 75 M 75
+
Sbjct: 84 L 84
>gi|395829280|ref|XP_003787788.1| PREDICTED: negative elongation factor D-like isoform 2 [Otolemur
garnettii]
Length = 591
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24 EADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83
Query: 75 M 75
+
Sbjct: 84 L 84
>gi|426227006|ref|XP_004007621.1| PREDICTED: LOW QUALITY PROTEIN: negative elongation factor C/D-like
[Ovis aries]
Length = 613
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E +V ECL KFSTPDYIMEP +F+ L RYFQAGG+PE+VI L+
Sbjct: 59 EEDAQVQQECLRKFSTPDYIMEPSVFNTLMRYFQAGGSPEEVIRLL 104
>gi|296480901|tpg|DAA23016.1| TPA: TH1-like isoform 2 [Bos taurus]
Length = 591
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 39 EDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 84
>gi|395829282|ref|XP_003787789.1| PREDICTED: negative elongation factor D-like isoform 3 [Otolemur
garnettii]
Length = 591
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 6/61 (9%)
Query: 21 DSDGG----DDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIEL 74
++DGG DD E + EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L
Sbjct: 24 EADGGQQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQL 83
Query: 75 M 75
+
Sbjct: 84 L 84
>gi|119595861|gb|EAW75455.1| TH1-like (Drosophila), isoform CRA_c [Homo sapiens]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 21 DSDGG---DDPMENP--QEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG DD E EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 33 EADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 92
>gi|10435190|dbj|BAB14519.1| unnamed protein product [Homo sapiens]
Length = 192
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 21 DSDGG---DDPMENP--QEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG DD E EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 15 EADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 74
>gi|443700232|gb|ELT99304.1| hypothetical protein CAPTEDRAFT_160748, partial [Capitella
teleta]
Length = 583
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 24 GGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELMIIDNMA 81
G D+ ME+ V EC++ FS D+IMEPG+FS LKRYF++GG+PE V++L+ + MA
Sbjct: 27 GDDEEMEDSSAVQQECIDAFSNTDFIMEPGVFSTLKRYFKSGGSPEVVVQLLSDNYMA 84
>gi|194385572|dbj|BAG65163.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 5/60 (8%)
Query: 21 DSDGG---DDPMENP--QEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
++DGG DD E EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 24 EADGGQQEDDSGEGEDDAEVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 83
>gi|344296608|ref|XP_003419998.1| PREDICTED: negative elongation factor D-like [Loxodonta africana]
Length = 673
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 125 EVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 166
>gi|126303152|ref|XP_001377475.1| PREDICTED: negative elongation factor D [Monodelphis domestica]
Length = 581
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 33 EVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 74
>gi|395506746|ref|XP_003757691.1| PREDICTED: negative elongation factor D-like [Sarcophilus
harrisii]
Length = 580
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/42 (73%), Positives = 35/42 (83%)
Query: 34 EVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EV ECL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 32 EVQQECLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 73
>gi|71895789|ref|NP_001025682.1| negative elongation factor complex member C/D [Xenopus (Silurana)
tropicalis]
gi|62201365|gb|AAH93471.1| th1l protein [Xenopus (Silurana) tropicalis]
Length = 582
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 13 WDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVI 72
W+ +D D G+D EV ECL KF+T DYIMEP +F+ LKRYFQ+GG+PE VI
Sbjct: 17 WEDRGMDEDYGEGEDD----GEVQQECLRKFTTRDYIMEPAVFNTLKRYFQSGGSPENVI 72
Query: 73 ELM 75
+L+
Sbjct: 73 QLL 75
>gi|417411884|gb|JAA52361.1| Putative negative elongation factor d, partial [Desmodus
rotundus]
Length = 600
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPM---ENPQEVLNECLEKFSTPDYIMEPGIFSQ 57
M++DY D+ DS +D E+ EV ECL FST DYIMEP IF+
Sbjct: 11 MDEDYFGSAAEWGDE----ADSGQQEDEFAEGEDDAEVQQECLRTFSTRDYIMEPSIFNT 66
Query: 58 LKRYFQAGGNPEQVIELM 75
LKRYFQAGG+PE VI+L+
Sbjct: 67 LKRYFQAGGSPENVIQLL 84
>gi|197632041|gb|ACH70744.1| TH1-like [Salmo salar]
gi|223648606|gb|ACN11061.1| Negative elongation factor D [Salmo salar]
Length = 578
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPME--NPQEVLNECLEKFSTPDYIMEPGIFSQL 58
M+++Y + WD DG DD +E N +V +CL+KFS+ DYIMEP +F+ L
Sbjct: 1 MDEEYYERNIGDWD------GPDGNDDYVEGENDGKVQEDCLQKFSSRDYIMEPAVFNTL 54
Query: 59 KRYFQAGGNPEQVIELM 75
K YFQAGG+PE VI+L+
Sbjct: 55 KTYFQAGGSPEHVIQLL 71
>gi|296487186|tpg|DAA29299.1| TPA: TH1-like protein [Bos taurus]
Length = 584
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 14 DQDMVDVDSDGGDDPMEN------PQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGN 67
DQD ++ GD E+ +V ECL+KFSTPDYIMEP +F+ L RYFQAG +
Sbjct: 9 DQDDFGSPAEWGDQQPEDGVLGEEDAQVQQECLQKFSTPDYIMEPSVFNTLMRYFQAGRS 68
Query: 68 PEQVIELM 75
PE+VI L+
Sbjct: 69 PEEVIRLL 76
>gi|348508012|ref|XP_003441549.1| PREDICTED: negative elongation factor D-like [Oreochromis
niloticus]
Length = 579
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EN ++ CLEKFS+ DYIMEP IFS LK YFQAGG+PE VI+L+
Sbjct: 27 ENDGKIQEACLEKFSSRDYIMEPAIFSTLKTYFQAGGSPEHVIQLL 72
>gi|432859566|ref|XP_004069158.1| PREDICTED: negative elongation factor C/D-like isoform 1 [Oryzias
latipes]
Length = 579
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 41/62 (66%)
Query: 14 DQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIE 73
D + DV+ + G E + CL+KFS+ DYIMEP IFS LK YFQAGG+PE VI+
Sbjct: 11 DWESSDVNVEDGHMEGETDGAIQEACLQKFSSRDYIMEPAIFSTLKMYFQAGGSPEHVIQ 70
Query: 74 LM 75
L+
Sbjct: 71 LL 72
>gi|390339864|ref|XP_003725107.1| PREDICTED: negative elongation factor D-like [Strongylocentrotus
purpuratus]
Length = 547
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 33 QEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+E+ ECLE F++ DYIMEPG+F LKRYF+AGG PEQV+ L+
Sbjct: 39 EEITKECLEAFASTDYIMEPGVFKDLKRYFKAGGGPEQVVVLL 81
>gi|260819006|ref|XP_002604673.1| hypothetical protein BRAFLDRAFT_282346 [Branchiostoma floridae]
gi|229290001|gb|EEN60684.1| hypothetical protein BRAFLDRAFT_282346 [Branchiostoma floridae]
Length = 582
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 49/89 (55%), Gaps = 15/89 (16%)
Query: 3 DDYDDEQTHRWDQDMVDVDSD----------GGDDPMENPQEVLNECLEKFSTPDYIMEP 52
DD+DD + WD D D D GGD E V ECLE F DYIMEP
Sbjct: 2 DDFDDSGS--WDGDPYDRSYDSLHGEDHEGEGGD---EEDMAVQQECLEAFGNRDYIMEP 56
Query: 53 GIFSQLKRYFQAGGNPEQVIELMIIDNMA 81
GIF+ L+RYFQ GG PEQVI+L+ + A
Sbjct: 57 GIFNMLQRYFQHGGAPEQVIDLLSTNYTA 85
>gi|351694786|gb|EHA97704.1| Negative elongation factor D [Heterocephalus glaber]
Length = 649
Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 38 ECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+CL KFST DYIMEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 105 KCLHKFSTRDYIMEPSIFNTLKRYFQAGGSPENVIQLL 142
>gi|213515206|ref|NP_001133943.1| Negative elongation factor D [Salmo salar]
gi|209154200|gb|ACI33332.1| Negative elongation factor D [Salmo salar]
gi|209155914|gb|ACI34189.1| Negative elongation factor D [Salmo salar]
Length = 579
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
EN +V +CL+KFS+ DYIMEP +F+ LK YFQAGG+PE VI+L+
Sbjct: 27 ENDGKVQEDCLQKFSSRDYIMEPAVFNTLKTYFQAGGSPEHVIQLL 72
>gi|291239261|ref|XP_002739542.1| PREDICTED: TH1-like (Drosophila)-like [Saccoglossus kowalevskii]
Length = 584
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 36/46 (78%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+N + ECL+ FS+ DYIMEPG+F L+RYF+AGG PEQV+EL+
Sbjct: 33 QNDALIQQECLDNFSSKDYIMEPGVFKDLQRYFRAGGAPEQVVELL 78
>gi|432859568|ref|XP_004069159.1| PREDICTED: negative elongation factor C/D-like isoform 2 [Oryzias
latipes]
Length = 574
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 39 CLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
CL+KFS+ DYIMEP IFS LK YFQAGG+PE VI+L+
Sbjct: 31 CLQKFSSRDYIMEPAIFSTLKMYFQAGGSPEHVIQLL 67
>gi|41055253|ref|NP_957484.1| negative elongation factor complex member C/D [Danio rerio]
gi|28278426|gb|AAH45357.1| TH1-like (Drosophila) [Danio rerio]
Length = 579
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKR 60
M+++Y +H + + D + G E +V +CL+KFS+ DYIMEP +F+ LK
Sbjct: 1 MDEEY---YSHAGEWEAQDGSMEDGYGDAEADGKVQEDCLQKFSSRDYIMEPTVFNTLKS 57
Query: 61 YFQAGGNPEQVIELM 75
YFQAGG+PE VI+L+
Sbjct: 58 YFQAGGSPEHVIQLL 72
>gi|405976895|gb|EKC41373.1| Negative elongation factor D [Crassostrea gigas]
Length = 612
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 11/79 (13%)
Query: 3 DDYDDEQTHRWDQDMVDVDSDGGDDPMEN------PQEVLNECLEKFSTPDYIMEPGIFS 56
DD++D++ + W+ D GD P E+ EC++ FS+ DYIMEPG+F
Sbjct: 2 DDFEDDEENMWEGR-----HDVGDSPDEDDEDEEEKMAAQQECVDLFSSKDYIMEPGVFG 56
Query: 57 QLKRYFQAGGNPEQVIELM 75
LKR+ QAGG+PE+V+E++
Sbjct: 57 TLKRFLQAGGSPEKVVEML 75
>gi|328779879|ref|XP_394889.3| PREDICTED: negative elongation factor D [Apis mellifera]
Length = 463
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MNDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYI 49
M DYD+++ W ++M + G+D +NPQE+LNECL+KF TPDYI
Sbjct: 1 MESDYDEDRG-TWTEEMTRTEDCSGEDNFDNPQEILNECLDKFKTPDYI 48
>gi|198425370|ref|XP_002129224.1| PREDICTED: similar to TH1-like [Ciona intestinalis]
Length = 578
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 35 VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+ + C+ + S+ DYIMEP IF+ LKRYFQAGG PE+V+EL+
Sbjct: 30 IKDTCVMEMSSKDYIMEPSIFTCLKRYFQAGGMPEKVVELL 70
>gi|410920205|ref|XP_003973574.1| PREDICTED: negative elongation factor D-like [Takifugu rubripes]
Length = 573
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 38 ECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+CL +FS+ DYIMEP IF+ LK YF+AGG+PE VI+L+
Sbjct: 29 DCLTRFSSRDYIMEPTIFNTLKTYFKAGGSPELVIQLL 66
>gi|47222864|emb|CAF96531.1| unnamed protein product [Tetraodon nigroviridis]
Length = 617
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 22 SDGG-DDPMENPQEVLNE-CLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIE 73
+DGG +D +E E C++KFS+ DYIMEP IF+ LK YF+AGG+PE VI+
Sbjct: 15 ADGGAEDNVEGDDGTTQEDCVKKFSSRDYIMEPTIFNTLKTYFKAGGSPELVIQ 68
>gi|312083897|ref|XP_003144053.1| negative elongation factor C/D [Loa loa]
gi|307760784|gb|EFO20018.1| negative elongation factor C/D [Loa loa]
Length = 576
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 17 MVDVDSDGGDDPMENPQE---VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIE 73
M D D G D N +E +L+ C+ + PD++MEP I L+ +F+ GG+PE V+
Sbjct: 1 MEDPDDYGEGDDETNEEERKMLLDHCIRHLNLPDFVMEPQIVGVLQTFFRCGGDPETVVN 60
Query: 74 LM 75
L+
Sbjct: 61 LL 62
>gi|324503176|gb|ADY41385.1| Negative elongation factor D [Ascaris suum]
Length = 569
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 21 DSDGGDDPMENPQE-VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
D D +P E ++ +L C S PD++MEP I L +FQ GGNPE V+ L+
Sbjct: 6 DYDEDAEPTEEEKKFMLEHCTRLLSLPDFVMEPQIVGILGSFFQCGGNPEMVVNLL 61
>gi|432097228|gb|ELK27568.1| Negative elongation factor D [Myotis davidii]
Length = 533
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 50 MEPGIFSQLKRYFQAGGNPEQVIELM 75
MEP IF+ LKRYFQAGG+PE VI+L+
Sbjct: 1 MEPSIFNTLKRYFQAGGSPENVIQLL 26
>gi|170596194|ref|XP_001902676.1| Conserved hypothetical protein [Brugia malayi]
gi|158589512|gb|EDP28473.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 101
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 35 VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+L+ C+ S PD++MEP I L+ +F+ GG+PE V+ L+
Sbjct: 22 LLDHCMRHLSLPDFVMEPQIVGVLQTFFRCGGDPETVVNLL 62
>gi|402581243|gb|EJW75191.1| hypothetical protein WUBG_13900, partial [Wuchereria bancrofti]
Length = 175
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 35 VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+L+ C+ S PD++MEP I L+ +F+ GG+PE V+ L+
Sbjct: 21 LLDHCMRHLSLPDFVMEPQIVGVLQTFFRCGGDPETVVNLL 61
>gi|170592639|ref|XP_001901072.1| Negative elongation factor C/D [Brugia malayi]
gi|158591139|gb|EDP29752.1| Negative elongation factor C/D, putative [Brugia malayi]
Length = 574
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 35 VLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
+L+ C+ S PD++MEP I L+ +F+ GG+PE V+ L+
Sbjct: 22 LLDHCMRHLSLPDFVMEPQIVGVLQTFFRCGGDPETVVNLL 62
>gi|196003228|ref|XP_002111481.1| hypothetical protein TRIADDRAFT_55545 [Trichoplax adhaerens]
gi|190585380|gb|EDV25448.1| hypothetical protein TRIADDRAFT_55545 [Trichoplax adhaerens]
Length = 591
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 30 ENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
E+ V+ EC KFS D +ME + +++Y +AGG PE++++L+
Sbjct: 34 EDTMTVIEECKRKFSNDDSVMESDLIVHIRKYIKAGGTPEELVQLL 79
>gi|449687246|ref|XP_002165654.2| PREDICTED: negative elongation factor D-like [Hydra
magnipapillata]
Length = 531
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 2 NDDYDDEQTHRWDQDMVDVDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRY 61
N+D D E+ W + ++ D E+ V+NEC EK S+ D+IMEP + +K++
Sbjct: 31 NEDVDREE---WTEQHLE---STDDFEFEDKHAVINECKEKMSSKDFIMEPAVSFYIKKF 84
Query: 62 FQAGGNPEQVIELM 75
AGG + I L+
Sbjct: 85 LDAGGCQDDFINLL 98
>gi|440790367|gb|ELR11650.1| endonuclease III, putative [Acanthamoeba castellanii str. Neff]
Length = 637
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 27 DPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
D ++ VL EC+ F D IME G+ + K++ +GG P+ V+ L+
Sbjct: 2 DEIDELGRVLEECVAAFKQKDSIMEVGVLHETKKFLASGGTPQTVVHLL 50
>gi|290981442|ref|XP_002673439.1| hypothetical protein NAEGRDRAFT_71340 [Naegleria gruberi]
gi|284087023|gb|EFC40695.1| hypothetical protein NAEGRDRAFT_71340 [Naegleria gruberi]
Length = 622
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 20 VDSDGGDDPMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
V G DP ++ VL EC FS D I P IF LK+Y + GG P +++++
Sbjct: 17 VAPSGESDPTKS---VLEECERHFSENDAITNPYIFDYLKQYIKNGGKPSTIVQML 69
>gi|308805891|ref|XP_003080257.1| unnamed protein product [Ostreococcus tauri]
gi|116058717|emb|CAL54424.1| unnamed protein product [Ostreococcus tauri]
Length = 643
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 28 PMENPQEVLNECLEKFSTPDYIMEPGIFSQLKRYFQAGGNPEQVIELM 75
P E VL E + T D+IMEP +KRY AGG P IE +
Sbjct: 28 PDEATTAVLEEIERRMRTKDFIMEPEAIDDVKRYVAAGGAPSTAIETL 75
>gi|391330203|ref|XP_003739553.1| PREDICTED: negative elongation factor D-like [Metaseiulus
occidentalis]
Length = 550
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 47 DYIMEPGIFSQLKRYFQAGGNPEQVIELMI 76
D IMEP IF LK + Q GG+PE+ ++L+I
Sbjct: 12 DSIMEPTIFGTLKSFLQNGGDPEKAVDLLI 41
>gi|156349222|ref|XP_001621968.1| hypothetical protein NEMVEDRAFT_v1g176382 [Nematostella
vectensis]
gi|156208340|gb|EDO29868.1| predicted protein [Nematostella vectensis]
Length = 523
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 49 IMEPGIFSQLKRYFQAGGNPEQVIELM 75
+MEP +FS ++RYF GG E++++L+
Sbjct: 2 VMEPDVFSYIRRYFLVGGPREELVKLL 28
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,538,611,544
Number of Sequences: 23463169
Number of extensions: 58996277
Number of successful extensions: 142070
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 141941
Number of HSP's gapped (non-prelim): 131
length of query: 81
length of database: 8,064,228,071
effective HSP length: 52
effective length of query: 29
effective length of database: 6,844,143,283
effective search space: 198480155207
effective search space used: 198480155207
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)