Your job contains 1 sequence.
>psy15695
MDDVNLRIHLLCKPMYQTGEFHPPVTYTVIFQPQSTQSSSMYESIYEPINPRPPSDLSSR
SNYSLYSSNIPPPEAEVDALTDLLVHSLDTSSESDLFAIEKVHSICNSSKSSNELIAEIT
TLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHTPTHLALLDEVVTCHTFLHHKVLQL
FIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGCVVPVVKYVKQCWQRGDTDISLIRY
FVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRGDGENDPVSEFIVHCKAHFVSQNN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15695
(299 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0010416 - symbol:TH1 "TH1" species:7227 "Drosophil... 773 9.0e-77 1
MGI|MGI:1926424 - symbol:Nelfcd "negative elongation fact... 695 1.7e-68 1
UNIPROTKB|Q8IXH7 - symbol:NELFCD "Negative elongation fac... 693 2.7e-68 1
UNIPROTKB|F1NR08 - symbol:TH1L "Uncharacterized protein" ... 692 3.5e-68 1
UNIPROTKB|Q5ZIQ8 - symbol:TH1L "Uncharacterized protein" ... 692 3.5e-68 1
ZFIN|ZDB-GENE-040426-720 - symbol:nelfcd "negative elonga... 688 9.2e-68 1
UNIPROTKB|F1MW69 - symbol:TH1L "Uncharacterized protein" ... 687 1.2e-67 1
UNIPROTKB|A5GFY4 - symbol:TH1L "Negative elongation facto... 686 1.5e-67 1
UNIPROTKB|F1PIH1 - symbol:TH1L "Uncharacterized protein" ... 685 1.9e-67 1
DICTYBASE|DDB_G0268678 - symbol:DDB_G0268678 "putative ne... 271 1.2e-22 1
>FB|FBgn0010416 [details] [associations]
symbol:TH1 "TH1" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032021 "NELF complex" evidence=IPI] [GO:0034244
"negative regulation of transcription elongation from RNA
polymerase II promoter" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR006942 Pfam:PF04858 GO:GO:0017053
GO:GO:0022008 EMBL:AE014298 GO:GO:0006351 GO:GO:0003723 EMBL:U34925
GO:GO:0034244 GO:GO:0005703 GO:GO:0005705 GO:GO:0007070
GO:GO:0032021 EMBL:AJ238377 EMBL:AJ238378 EMBL:L01790 EMBL:AY051957
PIR:T13287 RefSeq:NP_573123.1 UniGene:Dm.3007 DIP:DIP-23874N
IntAct:Q24134 MINT:MINT-937993 STRING:Q24134 PaxDb:Q24134
EnsemblMetazoa:FBtr0074305 GeneID:32607 KEGG:dme:Dmel_CG9984
UCSC:CG9984-RA CTD:32607 FlyBase:FBgn0010416 eggNOG:NOG72470
GeneTree:ENSGT00390000001799 InParanoid:Q24134 KO:K15181
OMA:CKSNFIL OrthoDB:EOG4KSN0W PhylomeDB:Q24134 GenomeRNAi:32607
NextBio:779433 Bgee:Q24134 GermOnline:CG9984 PANTHER:PTHR12144
Uniprot:Q24134
Length = 578
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 146/204 (71%), Positives = 171/204 (83%)
Query: 93 ESDLFAIEKVHSICNSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLC 152
+S + AIEK H+ICN + S ELIAE+ TL++CI+YPVV VGVIRW+E V EPSYFKL
Sbjct: 374 KSTIQAIEKAHTICNVDQGSTELIAELQTLYNCIKYPVVGVGVIRWIENVVMEPSYFKLS 433
Query: 153 TEHTPTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLL 212
T+ PTHLA+LDEV H L ++L L I LFESKQDELEILVQLEM+KM+LDRMVNLL
Sbjct: 434 TDSCPTHLAVLDEVAAVHPTLQQQILFLLIRLFESKQDELEILVQLEMKKMILDRMVNLL 493
Query: 213 CRGCVVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITG 272
RGCVVPV++Y+KQC DTDISLIRYFVTEVLE IT PY+PEFVQLFLP+VEN+EITG
Sbjct: 494 TRGCVVPVLRYIKQCCAIEDTDISLIRYFVTEVLETITHPYSPEFVQLFLPMVENEEITG 553
Query: 273 TMRGDGENDPVSEFIVHCKAHFVS 296
TMRG+G+NDPVSEFIVHCKAH+ +
Sbjct: 554 TMRGEGDNDPVSEFIVHCKAHYTT 577
>MGI|MGI:1926424 [details] [associations]
symbol:Nelfcd "negative elongation factor complex member
C/D, Th1l" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032021 "NELF complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR006942 Pfam:PF04858
MGI:MGI:1926424 GO:GO:0045892 GO:GO:0006351 GO:GO:0032021
eggNOG:NOG72470 GeneTree:ENSGT00390000001799 KO:K15181
PANTHER:PTHR12144 CTD:51497 HOVERGEN:HBG052597 OrthoDB:EOG4V170G
EMBL:AJ238741 EMBL:AJ238742 EMBL:AJ238743 EMBL:AK010360
EMBL:AK049418 EMBL:AL844534 EMBL:BC006959 EMBL:BC031747
IPI:IPI00395078 RefSeq:NP_065605.2 UniGene:Mm.271709 STRING:Q922L6
PhosphoSite:Q922L6 PaxDb:Q922L6 PRIDE:Q922L6
Ensembl:ENSMUST00000109075 GeneID:57314 KEGG:mmu:57314
UCSC:uc008ofc.1 HOGENOM:HOG000231762 ChiTaRS:TH1L NextBio:313663
Bgee:Q922L6 CleanEx:MM_TH1L Genevestigator:Q922L6
GermOnline:ENSMUSG00000016253 Uniprot:Q922L6
Length = 591
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 122/202 (60%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
AIE VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 390 AIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 449
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 450 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 509
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIRYFVTEVL+ I PPYT +FVQLFLPI+END I GT++
Sbjct: 510 VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKA 569
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 570 EGEHDPVTEFIAHCKSNFIVVN 591
>UNIPROTKB|Q8IXH7 [details] [associations]
symbol:NELFCD "Negative elongation factor C/D" species:9606
"Homo sapiens" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032021 "NELF complex"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0050434
"positive regulation of viral transcription" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR006942 Pfam:PF04858 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0016032 GO:GO:0006368 EMBL:AL109840 Reactome:REACT_1788
GO:GO:0050434 Reactome:REACT_1892 GO:GO:0032021 eggNOG:NOG72470
KO:K15181 OMA:CKSNFIL PANTHER:PTHR12144 EMBL:AJ238374 EMBL:AJ238375
EMBL:AJ238379 EMBL:AF161479 EMBL:AK001316 EMBL:AK023310
EMBL:AK023927 EMBL:AK293410 EMBL:BC014952 IPI:IPI00164949
IPI:IPI00387090 IPI:IPI00759539 RefSeq:NP_945327.2
UniGene:Hs.517148 ProteinModelPortal:Q8IXH7 DIP:DIP-34061N
IntAct:Q8IXH7 MINT:MINT-260753 STRING:Q8IXH7 PhosphoSite:Q8IXH7
DMDM:38372376 PaxDb:Q8IXH7 PRIDE:Q8IXH7 DNASU:51497
Ensembl:ENST00000344018 Ensembl:ENST00000460601 GeneID:51497
KEGG:hsa:51497 UCSC:uc002yag.3 CTD:51497 GeneCards:GC20P057556
H-InvDB:HIX0138057 HGNC:HGNC:15934 MIM:605297 neXtProt:NX_Q8IXH7
PharmGKB:PA38055 HOVERGEN:HBG052597 InParanoid:Q8IXH7
OrthoDB:EOG4V170G PhylomeDB:Q8IXH7 GenomeRNAi:51497 NextBio:55171
ArrayExpress:Q8IXH7 Bgee:Q8IXH7 Genevestigator:Q8IXH7
GermOnline:ENSG00000101158 Uniprot:Q8IXH7
Length = 590
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 121/202 (59%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
A+E VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 389 AVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 448
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 449 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 508
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIRYFVTEVL+ I PPYT +FVQLFLPI+END I GT++
Sbjct: 509 VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKT 568
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 569 EGEHDPVTEFIAHCKSNFIMVN 590
>UNIPROTKB|F1NR08 [details] [associations]
symbol:TH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032021 "NELF complex"
evidence=IEA] InterPro:IPR006942 Pfam:PF04858 GO:GO:0045892
GO:GO:0032021 GeneTree:ENSGT00390000001799 OMA:CKSNFIL
PANTHER:PTHR12144 EMBL:AADN02019004 IPI:IPI00821543
Ensembl:ENSGALT00000039031 ArrayExpress:F1NR08 Uniprot:F1NR08
Length = 602
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 121/202 (59%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
AIE VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 401 AIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 460
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 461 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 520
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIRYFVTEVL+ I PPYT +FVQLFLPI+EN+ I GT++
Sbjct: 521 VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENESIAGTIKT 580
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 581 EGEHDPVTEFIAHCKSNFIMMN 602
>UNIPROTKB|Q5ZIQ8 [details] [associations]
symbol:TH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0032021 "NELF complex"
evidence=IEA] InterPro:IPR006942 Pfam:PF04858 GO:GO:0045892
GO:GO:0032021 eggNOG:NOG72470 GeneTree:ENSGT00390000001799
KO:K15181 PANTHER:PTHR12144 CTD:51497 HOVERGEN:HBG052597
OrthoDB:EOG4V170G HOGENOM:HOG000231762 EMBL:AADN02019004
EMBL:AJ720726 IPI:IPI00572055 RefSeq:NP_001006294.1
UniGene:Gga.21932 STRING:Q5ZIQ8 Ensembl:ENSGALT00000012086
GeneID:419312 KEGG:gga:419312 InParanoid:Q5ZIQ8 NextBio:20822393
Uniprot:Q5ZIQ8
Length = 583
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 121/202 (59%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
AIE VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 382 AIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 441
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 442 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 501
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIRYFVTEVL+ I PPYT +FVQLFLPI+EN+ I GT++
Sbjct: 502 VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENESIAGTIKT 561
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 562 EGEHDPVTEFIAHCKSNFIMMN 583
>ZFIN|ZDB-GENE-040426-720 [details] [associations]
symbol:nelfcd "negative elongation factor complex
member C/D" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR006942 Pfam:PF04858
ZFIN:ZDB-GENE-040426-720 GO:GO:0005634 GO:GO:0045892
eggNOG:NOG72470 KO:K15181 PANTHER:PTHR12144 CTD:51497
HOVERGEN:HBG052597 OrthoDB:EOG4V170G HOGENOM:HOG000231762
EMBL:BC045357 IPI:IPI00770521 RefSeq:NP_957484.1 UniGene:Dr.115420
STRING:Q7ZVZ0 GeneID:394165 KEGG:dre:394165 InParanoid:Q7ZVZ0
NextBio:20815113 ArrayExpress:Q7ZVZ0 Uniprot:Q7ZVZ0
Length = 579
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 122/202 (60%), Positives = 168/202 (83%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
AIE VH++C N +K + EL+A ++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 378 AIETVHNLCCNENKGATELVAGLSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 437
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL I+LFE++ +L+++ Q+E++K LLDRMV+LL RG
Sbjct: 438 PVHLALLDEISTCHQLLHPQVLQLLIKLFETEHSQLDVMEQMELKKTLLDRMVHLLSRGY 497
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ +TDISLIRYFVTEVL+ I PPYT +FVQLFLPI+END I GT+R
Sbjct: 498 VLPVVGYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIRT 557
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GENDPV+EFI HCK++F+ N
Sbjct: 558 EGENDPVAEFIAHCKSNFIMMN 579
>UNIPROTKB|F1MW69 [details] [associations]
symbol:TH1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032021 "NELF complex" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR006942 Pfam:PF04858 GO:GO:0045892 GO:GO:0032021
GeneTree:ENSGT00390000001799 OMA:CKSNFIL PANTHER:PTHR12144
EMBL:DAAA02036315 IPI:IPI01003013 Ensembl:ENSBTAT00000025006
Uniprot:F1MW69
Length = 600
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 120/202 (59%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
A+E VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 399 AVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 458
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 459 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 518
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIR+FVTEVL+ I PPYT +FVQLFLPI+END I GT++
Sbjct: 519 VLPVVSYIRKCLEKLDTDISLIRHFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKT 578
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 579 EGEHDPVTEFIAHCKSNFILVN 600
>UNIPROTKB|A5GFY4 [details] [associations]
symbol:TH1L "Negative elongation factor D" species:9823
"Sus scrofa" [GO:0032021 "NELF complex" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR006942 Pfam:PF04858 GO:GO:0005634 GO:GO:0045892
GO:GO:0006351 eggNOG:NOG72470 GeneTree:ENSGT00390000001799
KO:K15181 PANTHER:PTHR12144 CTD:51497 HOVERGEN:HBG052597
OrthoDB:EOG4V170G HOGENOM:HOG000231762 EMBL:CR956646
RefSeq:NP_001107170.1 UniGene:Ssc.12022 STRING:A5GFY4
Ensembl:ENSSSCT00000008248 Ensembl:ENSSSCT00000034403
GeneID:100134985 KEGG:ssc:100134985 ArrayExpress:A5GFY4
Uniprot:A5GFY4
Length = 590
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 120/202 (59%), Positives = 170/202 (84%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
A+E VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 389 AVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 448
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 449 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGH 508
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIR+FVTEVL+ I PPYT +FVQLFLPI+END I GT++
Sbjct: 509 VLPVVSYIRKCLEKLDTDISLIRHFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKT 568
Query: 277 DGENDPVSEFIVHCKAHFVSQN 298
+GE+DPV+EFI HCK++F+ N
Sbjct: 569 EGEHDPVTEFIAHCKSNFILVN 590
>UNIPROTKB|F1PIH1 [details] [associations]
symbol:TH1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR006942 Pfam:PF04858 GO:GO:0005634
GO:GO:0045892 GeneTree:ENSGT00390000001799 OMA:CKSNFIL
PANTHER:PTHR12144 EMBL:AAEX03014054 Ensembl:ENSCAFT00000019342
Uniprot:F1PIH1
Length = 564
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 122/204 (59%), Positives = 171/204 (83%)
Query: 98 AIEKVHSIC-NSSKSSNELIAEITTLFHCIRYPVVSVGVIRWVECTVTEPSYFKLCTEHT 156
A+E VH++C N +K ++EL+AE++TL+ CIR+PVV++GV++WV+ TV+EP YF+L T+HT
Sbjct: 361 AVETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGVLKWVDWTVSEPRYFQLQTDHT 420
Query: 157 PTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELEILVQLEMRKMLLDRMVNLLCRGC 216
P HLALLDE+ TCH LH +VLQL ++LFE++ +L+++ QLE++K LLDRMV+LL RG
Sbjct: 421 PVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKKTLLDRMVHLLSRGY 480
Query: 217 VVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPYTPEFVQLFLPIVENDEITGTMRG 276
V+PVV Y+++C ++ DTDISLIRYFVTEVL+ I PPYT +FVQLFLPI+END I GT++
Sbjct: 481 VLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKT 540
Query: 277 DGENDPVSEFIV--HCKAHFVSQN 298
+GE+DPV+EFIV HCK++F+ N
Sbjct: 541 EGEHDPVTEFIVKAHCKSNFILVN 564
>DICTYBASE|DDB_G0268678 [details] [associations]
symbol:DDB_G0268678 "putative negative transcription
elongation factor NELF subunit" species:44689 "Dictyostelium
discoideum" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006942 Pfam:PF04858 dictyBase:DDB_G0268678
GO:GO:0005634 GO:GO:0045892 EMBL:AAFI02000004 eggNOG:NOG72470
KO:K15181 PANTHER:PTHR12144 RefSeq:XP_646857.1
EnsemblProtists:DDB0232149 GeneID:8616540 KEGG:ddi:DDB_G0268678
InParanoid:Q55F13 OMA:ECFELIA ProtClustDB:CLSZ2431474
Uniprot:Q55F13
Length = 660
Score = 271 (100.5 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 72/227 (31%), Positives = 119/227 (52%)
Query: 85 VHSLDTSSESD--LF-----AIEKVHSICNSSKSSNELIAEITTLFHCIRYPVVSVGVIR 137
++S +S+E D +F AIE VH+IC S+ +EL + + TL + +P++S+G+++
Sbjct: 410 INSSSSSNEKDNNVFKDITRAIEIVHNICQSNPLGSELQSVVGTLKDHLDFPIISMGIMQ 469
Query: 138 WVECTVTEP----SYFKLCTEHTPTHLALLDEVVTCHTFLHHKVLQLFIELFESKQDELE 193
W++ +T+ SY LC P +L L ++ H VL + + FE + +LE
Sbjct: 470 WIKHNLTDTTNLSSYNTLCV---PIYLDFLRDICLRHPLHRSVVLNILVSHFEVEAQDLE 526
Query: 194 ILVQLEMRKMLLDRMVNLLCRGCVVPVVKYVKQCWQRGDTDISLIRYFVTEVLEAITPPY 253
L LEMRK ++D +V L G V+PV+ ++ W D SL RYF+ +VL+ I PPY
Sbjct: 527 SLAILEMRKNVIDNIVYLFSCGYVIPVLDTIES-WAP-KIDPSLTRYFINQVLDIIEPPY 584
Query: 254 TPEFVQLFLPIVENDEITGTMRGDGENDP-VSEFIVHCKAHFVSQNN 299
+ F+ I++ I + +P V F+ CK + NN
Sbjct: 585 SQSFMDKMKSIIK---IINPFGESTKLEPSVQSFLDQCKNQLILNNN 628
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 299 284 0.00085 115 3 11 22 0.47 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 602 (64 KB)
Total size of DFA: 216 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 25.75u 0.08s 25.83t Elapsed: 00:00:33
Total cpu time: 25.75u 0.08s 25.83t Elapsed: 00:00:35
Start: Thu Aug 15 14:07:06 2013 End: Thu Aug 15 14:07:41 2013