BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15696
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P112|RGL1_DANRE Ral guanine nucleotide dissociation stimulator-like 1 OS=Danio
rerio GN=rgl1 PE=2 SV=1
Length = 804
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 40/43 (93%)
Query: 26 GTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
GTIPYLGTFLTDLTM+DTA+PD + GLINF+K+R+EFEV+AQ
Sbjct: 453 GTIPYLGTFLTDLTMLDTALPDQVEGGLINFEKRRREFEVIAQ 495
>sp|Q9NZL6|RGL1_HUMAN Ral guanine nucleotide dissociation stimulator-like 1 OS=Homo
sapiens GN=RGL1 PE=2 SV=1
Length = 768
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 13 RDVKLHDLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
R ++L V GT+PYLGTFLTDLTM+DTA+ D + GLINF+K+R+EFEV+AQ
Sbjct: 402 RRLQLQKDMGVMQGTVPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRREFEVIAQ 457
>sp|Q60695|RGL1_MOUSE Ral guanine nucleotide dissociation stimulator-like 1 OS=Mus
musculus GN=Rgl1 PE=1 SV=2
Length = 768
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 13 RDVKLHDLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
R ++L V GT+PYLGTFLTDLTM+DTA+ D + GLINF+K+R+EFEV+AQ
Sbjct: 402 RRLQLQKDMGVMQGTVPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRREFEVIAQ 457
>sp|Q3UYI5|RGL3_MOUSE Ral guanine nucleotide dissociation stimulator-like 3 OS=Mus
musculus GN=Rgl3 PE=1 SV=2
Length = 709
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 26 GTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
G +PYLGTFLTDL M+DTA+PDTL LINF+K+RKE+E+LA+
Sbjct: 417 GPVPYLGTFLTDLVMLDTALPDTLKGNLINFEKRRKEWEILAR 459
>sp|Q03386|GNDS_RAT Ral guanine nucleotide dissociation stimulator OS=Rattus norvegicus
GN=Ralgds PE=1 SV=1
Length = 895
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 23 VSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
V GT+PYLGTFLTDL M+DTA+ D L LINF+K+RKEFEV+AQ
Sbjct: 540 VIQGTVPYLGTFLTDLVMLDTAMKDYLYGRLINFEKRRKEFEVIAQ 585
>sp|Q03385|GNDS_MOUSE Ral guanine nucleotide dissociation stimulator OS=Mus musculus
GN=Ralgds PE=1 SV=2
Length = 852
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 23 VSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
V GT+PYLGTFLTDL M+DTA+ D L LINF+K+RKEFEV+AQ
Sbjct: 497 VIQGTVPYLGTFLTDLVMLDTAMKDYLYGRLINFEKRRKEFEVIAQ 542
>sp|Q12967|GNDS_HUMAN Ral guanine nucleotide dissociation stimulator OS=Homo sapiens
GN=RALGDS PE=1 SV=2
Length = 914
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/46 (67%), Positives = 38/46 (82%)
Query: 23 VSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
+ GT+PYLGTFLTDL M+DTA+ D L LINF+K+RKEFEV+AQ
Sbjct: 559 IIQGTVPYLGTFLTDLVMLDTAMKDYLYGRLINFEKRRKEFEVIAQ 604
>sp|O15211|RGL2_HUMAN Ral guanine nucleotide dissociation stimulator-like 2 OS=Homo
sapiens GN=RGL2 PE=1 SV=1
Length = 777
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 26 GTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
G +PYLGTFL DL M+D A D L +G INFDK+RKEF VL++
Sbjct: 427 GVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAVLSE 469
>sp|Q3MIN7|RGL3_HUMAN Ral guanine nucleotide dissociation stimulator-like 3 OS=Homo
sapiens GN=RGL3 PE=1 SV=2
Length = 710
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 30 YLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
YLGTFLTDL M+DTA+PD L LINF+K+RKE+E+LA+
Sbjct: 423 YLGTFLTDLVMLDTALPDMLEGDLINFEKRRKEWEILAR 461
>sp|Q61193|RGL2_MOUSE Ral guanine nucleotide dissociation stimulator-like 2 OS=Mus
musculus GN=Rgl2 PE=1 SV=2
Length = 778
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 26 GTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
G +PYLGTFL DL M+D A D L +G INFDK+RKEF +L++
Sbjct: 427 GVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAILSE 469
>sp|Q5TJE5|RGL2_CANFA Ral guanine nucleotide dissociation stimulator-like 2 OS=Canis
familiaris GN=RGL2 PE=3 SV=1
Length = 780
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
+PYLGTFL DL M+D A D L +G INFDK+RKEF VL++
Sbjct: 432 VPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAVLSE 472
>sp|Q13972|RGRF1_HUMAN Ras-specific guanine nucleotide-releasing factor 1 OS=Homo sapiens
GN=RASGRF1 PE=1 SV=1
Length = 1275
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N +PYLG +LTDL I+ P+ DGL+NF K R
Sbjct: 1181 LKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDGLVNFSKMR 1221
>sp|Q8IZJ4|RGDSR_HUMAN Ral-GDS-related protein OS=Homo sapiens GN=RGL4 PE=2 SV=1
Length = 473
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 26 GTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
G +P+LG FLT+L +D+AIPD L DG N +K+ KE VL +
Sbjct: 388 GVVPFLGDFLTELQRLDSAIPDDL-DG--NTNKRSKEVRVLQE 427
>sp|P27671|RGRF1_MOUSE Ras-specific guanine nucleotide-releasing factor 1 OS=Mus musculus
GN=Rasgrf1 PE=1 SV=2
Length = 1262
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N +PYLG +LTDL I+ P+ DGL+NF K R
Sbjct: 1168 LRNCDPPCVPYLGMYLTDLVFIEEGTPNYTEDGLVNFSKMR 1208
>sp|P70392|RGRF2_MOUSE Ras-specific guanine nucleotide-releasing factor 2 OS=Mus musculus
GN=Rasgrf2 PE=1 SV=2
Length = 1189
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N + +PYLG +LTDL I+ P+ +GL+NF K R
Sbjct: 1095 LKNCNPPAVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMR 1135
>sp|Q99JE4|RGRF2_RAT Ras-specific guanine nucleotide-releasing factor 2 OS=Rattus
norvegicus GN=Rasgrf2 PE=1 SV=1
Length = 1190
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N + +PYLG +LTDL I+ P+ +GL+NF K R
Sbjct: 1096 LKNCNPPAVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMR 1136
>sp|O14827|RGRF2_HUMAN Ras-specific guanine nucleotide-releasing factor 2 OS=Homo sapiens
GN=RASGRF2 PE=1 SV=2
Length = 1237
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N + +PYLG +LTDL I+ P+ +GL+NF K R
Sbjct: 1143 LKNCNPPAVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMR 1183
>sp|A2CEA7|RGRF2_DANRE Ras-specific guanine nucleotide-releasing factor 2 OS=Danio rerio
GN=rasgrf2 PE=3 SV=1
Length = 1244
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N + +PYLG +LTDL I+ P+ +GL+NF K R
Sbjct: 1150 LKNCNPPCVPYLGMYLTDLAFIEEGTPNFTEEGLVNFSKMR 1190
>sp|P28818|RGRF1_RAT Ras-specific guanine nucleotide-releasing factor 1 OS=Rattus
norvegicus GN=Rasgrf1 PE=1 SV=1
Length = 1244
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
L N +PYLG +LTDL ++ P+ DGL+NF K R
Sbjct: 1150 LRNCDPPCVPYLGMYLTDLAFLEEGTPNYTEDGLVNFSKMR 1190
>sp|Q8IS20|GEFC_DICDI Ras guanine nucleotide exchange factor C OS=Dictyostelium discoideum
GN=gefC PE=2 SV=1
Length = 1457
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 18 HDLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
H + + +P+LGT+L DLT I+ P + GLINF K+RK EV+ Q
Sbjct: 1367 HLMTTIQPPCVPFLGTYLKDLTFIEEGNPSII-GGLINFYKQRKIAEVIFQ 1416
>sp|Q13905|RPGF1_HUMAN Rap guanine nucleotide exchange factor 1 OS=Homo sapiens GN=RAPGEF1
PE=1 SV=3
Length = 1077
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVL 66
L V IPYLG L DLT + PD + DG +NF K+ ++F +L
Sbjct: 974 LSEVEPPCIPYLGLILQDLTFVHLGNPDYI-DGKVNFSKRWQQFNIL 1019
>sp|O77086|C3G_DROME Guanine nucleotide-releasing factor 2 OS=Drosophila melanogaster
GN=C3G PE=1 SV=4
Length = 1571
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVL 66
IPY+G L DLT + D L G+INF K+ +++ ++
Sbjct: 1481 IPYIGLILQDLTFVHVGNQDYLSKGVINFSKRWQQYNII 1519
>sp|B0M0P8|GEFL_DICDI Ras guanine nucleotide exchange factor L OS=Dictyostelium discoideum
GN=gefL PE=2 SV=1
Length = 2356
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLA 67
IPYLG +L DLT I+ PD++ + LIN+ KK+ + +++
Sbjct: 2261 IPYLGVYLKDLTFIEEGNPDSI-NSLINWGKKKLIYNIIS 2299
>sp|Q54FF3|GEFK_DICDI Ras guanine nucleotide exchange factor K OS=Dictyostelium discoideum
GN=gefK PE=2 SV=1
Length = 1557
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
L N +PY+G +LTDLT I+ P+ + LINF K + V+++
Sbjct: 1458 LKNSDPPVVPYIGVYLTDLTFIEEGNPNIIRGNLINFAKYYLIYRVISE 1506
>sp|Q54TK8|GEFP_DICDI Ras guanine nucleotide exchange factor P OS=Dictyostelium discoideum
GN=gefP PE=2 SV=1
Length = 1502
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 19 DLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
+L + +IPYLG L+DLT ++ D L +G NF K R
Sbjct: 1408 ELRQSTGASIPYLGVHLSDLTFVEEGNQDKLENGYTNFSKCR 1449
>sp|Q8IS21|GEFB_DICDI Ras guanine nucleotide exchange factor B OS=Dictyostelium discoideum
GN=gefB PE=2 SV=1
Length = 1529
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
IPYLG +LTDLT I+ D + GLINF K+ F + +
Sbjct: 1431 IPYLGIYLTDLTFIEDGNQDEI-KGLINFKKREMIFNTILE 1470
>sp|Q8IS15|GEFI_DICDI Ras guanine nucleotide exchange factor I OS=Dictyostelium
discoideum GN=gefI PE=2 SV=1
Length = 824
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
+PYLG +LTDLT + PD + G INF K++
Sbjct: 735 LPYLGVYLTDLTFFEEGNPDFI-QGFINFGKRK 766
>sp|Q8IS14|GEFJ_DICDI Ras guanine nucleotide exchange factor J OS=Dictyostelium
discoideum GN=gefJ PE=2 SV=1
Length = 812
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKR 60
+PYLG +LTDLT + PD + G INF K++
Sbjct: 723 LPYLGVYLTDLTFFEEGNPDFI-QGFINFGKRK 754
>sp|P26674|STE6_SCHPO Protein ste6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ste6 PE=4 SV=1
Length = 911
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVLAQ 68
+P+LG + TDLT + T D + +INFDK+ K +L +
Sbjct: 811 VPFLGVYFTDLTFLKTGNKDNFQN-MINFDKRTKVTRILNE 850
>sp|Q9USU1|EFC25_SCHPO Ras guanine nucleotide exchange factor efc25 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=efc25 PE=1 SV=1
Length = 987
Score = 35.8 bits (81), Expect = 0.084, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDG--LINFDKKRKEFEVLA 67
+P+LG L+DLT ID PD L L++F+K+ + +V+A
Sbjct: 898 VPFLGVILSDLTFIDEGNPDVLDSSPHLLSFNKRHRLADVVA 939
>sp|Q9ERD6|RGPS2_MOUSE Ras-specific guanine nucleotide-releasing factor RalGPS2 OS=Mus
musculus GN=Ralgps2 PE=1 SV=2
Length = 590
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 28 IPYLGTFLTDLTMIDTAIPDT 48
IPYLG +L+DLT ID+A P T
Sbjct: 199 IPYLGIYLSDLTYIDSAYPST 219
>sp|Q4R7W3|RGPS2_MACFA Ras-specific guanine nucleotide-releasing factor RalGPS2 OS=Macaca
fascicularis GN=RALGPS2 PE=2 SV=1
Length = 557
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 28 IPYLGTFLTDLTMIDTAIPDT 48
IPYLG +L+DLT ID+A P T
Sbjct: 199 IPYLGIYLSDLTYIDSAYPST 219
>sp|Q86X27|RGPS2_HUMAN Ras-specific guanine nucleotide-releasing factor RalGPS2 OS=Homo
sapiens GN=RALGPS2 PE=1 SV=1
Length = 583
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 28 IPYLGTFLTDLTMIDTAIPDT 48
IPYLG +L+DLT ID+A P T
Sbjct: 199 IPYLGIYLSDLTYIDSAYPST 219
>sp|Q5ZJK0|RGPS1_CHICK Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Gallus
gallus GN=RALGPS1 PE=2 SV=1
Length = 584
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 28 IPYLGTFLTDLTMIDTAIPDT 48
IPYLG +L+DLT ID+A P T
Sbjct: 200 IPYLGIYLSDLTYIDSAYPST 220
>sp|P26675|SOS_DROME Protein son of sevenless OS=Drosophila melanogaster GN=Sos PE=1 SV=2
Length = 1596
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDG-LINFDKKRKEFEVLAQ 68
L +++ +P+ G +LT++ ++ PD L + LINF K+RK E++ +
Sbjct: 968 LRSINPPCVPFFGRYLTNILHLEEGNPDLLANTELINFSKRRKVAEIIGE 1017
>sp|Q54S40|GBPD_DICDI Cyclic GMP-binding protein D OS=Dictyostelium discoideum GN=gbpD
PE=2 SV=1
Length = 1312
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDG-LINFDK 58
LPN IPYLG FLTD T +D + P D LIN D+
Sbjct: 492 LPN--EPCIPYLGLFLTDYTYLDESNPSLSTDSNLINIDR 529
>sp|A8AXM8|PYRF_STRGC Orotidine 5'-phosphate decarboxylase OS=Streptococcus gordonii
(strain Challis / ATCC 35105 / CH1 / DL1 / V288)
GN=pyrF PE=3 SV=1
Length = 230
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 10 SVCRDVKLHDLPNVSNGTIPYLGTFLTDLTMIDTA 44
S+ D+KLHD+PN + LGTF D+ + A
Sbjct: 57 SIFLDLKLHDIPNTVRSAMSVLGTFGIDMVTVHAA 91
>sp|O95267|GRP1_HUMAN RAS guanyl-releasing protein 1 OS=Homo sapiens GN=RASGRP1 PE=1 SV=2
Length = 797
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 14/59 (23%)
Query: 2 NYDVI--AYGSVCRDVKLHDLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDK 58
NYD AYG C D K IP LG L DL + A+PD L DG +N K
Sbjct: 336 NYDNYRRAYGE-CTDFK-----------IPILGVHLKDLISLYEAMPDYLEDGKVNVHK 382
>sp|Q55EC7|GEFX_DICDI RasGEF domain-containing serine/threonine-protein kinase X
OS=Dictyostelium discoideum GN=gefX PE=2 SV=1
Length = 960
Score = 33.5 bits (75), Expect = 0.40, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 20 LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRK 61
LP+ IP + L +L+ I+T+ P LP G++NF R+
Sbjct: 867 LPDAKPPCIPNIHLLLDELSFIETSSPRLLPGGIVNFFHYRQ 908
>sp|Q1LZ97|GRP4_BOVIN RAS guanyl-releasing protein 4 OS=Bos taurus GN=RASGRP4 PE=2 SV=1
Length = 673
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDK 58
+P LG L DL ++ A PD LPDG ++ K
Sbjct: 348 LPVLGVHLKDLVALNEAQPDRLPDGRLHLPK 378
>sp|A3CN89|PYRF_STRSV Orotidine 5'-phosphate decarboxylase OS=Streptococcus sanguinis
(strain SK36) GN=pyrF PE=3 SV=1
Length = 230
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 10 SVCRDVKLHDLPNVSNGTIPYLGTFLTDLTMIDTA 44
S+ D+KLHD+PN + LGTF D+ + A
Sbjct: 57 SIFLDLKLHDIPNTVRSAMSVLGTFGIDMVTVHAA 91
>sp|Q55GH9|GEFW_DICDI Ras guanine nucleotide exchange factor W OS=Dictyostelium discoideum
GN=gefW PE=2 SV=1
Length = 1172
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDG-LINFDKKRK 61
IPY+G +L+DLT I PD LINF K R+
Sbjct: 1088 IPYIGLYLSDLTFIHEGNPDYYQQSQLINFSKLRE 1122
>sp|Q8IS16|GEFH_DICDI Ras guanine nucleotide exchange factor H OS=Dictyostelium
discoideum GN=gefH PE=2 SV=1
Length = 604
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVL 66
IP+LG L DL +D + PD + + L+N +K+R + V+
Sbjct: 514 IPFLGIHLRDLAFVDESNPDRI-NNLLNLNKRRVIWRVI 551
>sp|B0UXH6|RGPS1_DANRE Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Danio
rerio GN=ralgps1 PE=2 SV=1
Length = 581
Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRKEFEVL 66
IPYLG +L D+T ID+A P + D +I +++ + L
Sbjct: 199 IPYLGIYLFDMTYIDSAYPAS--DSIIETEQRTNQMNNL 235
>sp|Q9Z1S3|GRP1_MOUSE RAS guanyl-releasing protein 1 OS=Mus musculus GN=Rasgrp1 PE=1 SV=1
Length = 795
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDK 58
IP LG L DL + A+PD L DG +N K
Sbjct: 352 IPILGVHLKDLISLYEAMPDYLEDGKVNVQK 382
>sp|Q552M5|GEFY_DICDI Ras guanine nucleotide exchange factor Y OS=Dictyostelium discoideum
GN=gefY PE=1 SV=2
Length = 1508
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 28 IPYLGTFLTDLTMIDTAIPDTLPDGLINFDKKRK 61
+P+LG +LTDLT ++ D +GLIN K+ +
Sbjct: 1427 LPFLGVYLTDLTFLEEGSFDQAENGLINIVKRTQ 1460
>sp|B5VMS9|SDC25_YEAS6 Guanine nucleotide exchange factor SDC25 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=SDC25 PE=3 SV=1
Length = 1265
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 16/63 (25%)
Query: 17 LHDLPNVSNGTIPYLGTFLTDLTMIDTAIPD--TLPDGL---------INFDKKRKEFEV 65
LH P +P+ G +L+DLT D+ PD L GL INF+K+ + ++
Sbjct: 1098 LHSAP-----CVPFFGVYLSDLTFTDSGNPDYLVLEHGLKGVHDEKKYINFNKRSRLVDI 1152
Query: 66 LAQ 68
L +
Sbjct: 1153 LQE 1155
>sp|B3LTF3|SDC25_YEAS1 Guanine nucleotide exchange factor SDC25 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=SDC25 PE=3 SV=1
Length = 1252
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 16/63 (25%)
Query: 17 LHDLPNVSNGTIPYLGTFLTDLTMIDTAIPD--TLPDGL---------INFDKKRKEFEV 65
LH P +P+ G +L+DLT D+ PD L GL INF+K+ + ++
Sbjct: 1098 LHSAP-----CVPFFGVYLSDLTFTDSGNPDYLVLEHGLKGVHDEKKYINFNKRSRLVDI 1152
Query: 66 LAQ 68
L +
Sbjct: 1153 LQE 1155
>sp|Q54PQ4|GEFA_DICDI Ras guanine nucleotide exchange factor A OS=Dictyostelium
discoideum GN=gefA PE=2 SV=1
Length = 605
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 16 KLHDLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPD------GLINFDKKRKEFEVLA 67
+L ++P + +PYLG LTDLT ID + + D LINF K+ F++++
Sbjct: 493 RLQNVPPM----LPYLGVHLTDLTFIDENPNNFVTDVGGKQVSLINFTKRTLVFKIIS 546
>sp|A7A0P0|SDC25_YEAS7 Guanine nucleotide exchange factor SDC25 OS=Saccharomyces cerevisiae
(strain YJM789) GN=SDC25 PE=3 SV=2
Length = 1252
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 16/63 (25%)
Query: 17 LHDLPNVSNGTIPYLGTFLTDLTMIDTAIPD--TLPDGL---------INFDKKRKEFEV 65
LH P +P+ G +L+DLT D+ PD L GL INF+K+ + ++
Sbjct: 1098 LHSAP-----CVPFFGVYLSDLTFTDSGNPDYLVLEHGLKGVHDEKKYINFNKRSRLVDI 1152
Query: 66 LAQ 68
L +
Sbjct: 1153 LQE 1155
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,879,499
Number of Sequences: 539616
Number of extensions: 874908
Number of successful extensions: 1825
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1770
Number of HSP's gapped (non-prelim): 79
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)