RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15696
         (68 letters)



>d1nvus_ a.117.1.1 (S:) Son of sevenless protein homolog 1 (sos-1)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 481

 Score = 59.4 bits (143), Expect = 5e-13
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 20  LPNVSNGTIPYLGTFLTDLTMIDTAIPDTLP---DGLINFDKKRKEFEVLAQ 68
           L +++   +P+ G +LT++   +   P+ L      LINF K+RK  E+  +
Sbjct: 354 LRSINPPCVPFFGIYLTNILKTEEGNPEVLKRHGKELINFSKRRKVAEITGE 405


>d1j2la_ g.20.1.1 (A:) Flavoridin (triflavin) {Habu snake
          (Trimeresurus flavoviridis) [TaxId: 88087]}
          Length = 68

 Score = 24.0 bits (52), Expect = 1.1
 Identities = 3/22 (13%), Positives = 7/22 (31%)

Query: 9  GSVCRDVKLHDLPNVSNGTIPY 30
           ++CR  +     +   G    
Sbjct: 42 RTICRIARGDFPDDRCTGQSAD 63


>d2echa_ g.20.1.1 (A:) Echistatin {Saw-scaled viper (Echis
          carinatus) [TaxId: 40353]}
          Length = 49

 Score = 22.7 bits (49), Expect = 1.8
 Identities = 5/22 (22%), Positives = 11/22 (50%)

Query: 9  GSVCRDVKLHDLPNVSNGTIPY 30
          G++C+  +  D+ +  NG    
Sbjct: 17 GTICKRARGDDMDDYCNGKTCD 38


>d2i0ka1 d.58.32.3 (A:274-613) Cholesterol oxidase {Brevibacterium
           sterolicum [TaxId: 1702]}
          Length = 340

 Score = 22.6 bits (48), Expect = 4.7
 Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 3/32 (9%)

Query: 36  TDLTMIDTAIPDTLPDGLI---NFDKKRKEFE 64
           TD  ++   +  T  +G+    N+D  R  + 
Sbjct: 291 TDNDIVTNKMRATYIEGVPTTENWDTARARYN 322


>d2d0oa2 c.55.1.6 (A:1-92,A:255-403) Diol dehydratase-reactivating
           factor large subunit DdrA {Klebsiella oxytoca [TaxId:
           571]}
          Length = 241

 Score = 22.1 bits (47), Expect = 9.3
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 5/35 (14%)

Query: 19  DLPNVSNGTIPYLGTFLTDLTMIDTAIPDTLPDGL 53
           +L N  +  I     F+ DL  +DT++P ++  GL
Sbjct: 156 ELTNKPSSEI-----FIQDLLAVDTSVPVSVTGGL 185


>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1
          {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 258

 Score = 21.9 bits (46), Expect = 9.4
 Identities = 5/27 (18%), Positives = 13/27 (48%)

Query: 17 LHDLPNVSNGTIPYLGTFLTDLTMIDT 43
          + D+ ++ +  +P +  F   L  + T
Sbjct: 41 VFDIGSLKHELLPLVPLFCQSLLEMGT 67


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.142    0.420 

Gapped
Lambda     K      H
   0.267   0.0577    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 264,693
Number of extensions: 9418
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 6
Length of query: 68
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 31
Effective length of database: 1,899,586
Effective search space: 58887166
Effective search space used: 58887166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.2 bits)