Query psy15698
Match_columns 577
No_of_seqs 471 out of 3123
Neff 7.0
Searched_HMMs 46136
Date Fri Aug 16 19:09:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15698.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/15698hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4266|consensus 100.0 5E-120 1E-124 949.3 29.1 517 45-577 40-672 (1033)
2 cd07479 Peptidases_S8_SKI-1_li 100.0 1.8E-51 3.9E-56 416.8 20.1 239 208-448 1-254 (255)
3 PTZ00262 subtilisin-like prote 100.0 1.5E-45 3.3E-50 403.8 27.0 266 183-466 283-609 (639)
4 cd05561 Peptidases_S8_4 Peptid 100.0 1.3E-44 2.8E-49 363.3 20.7 224 217-459 1-239 (239)
5 cd07476 Peptidases_S8_thiazoli 100.0 6.6E-43 1.4E-47 356.3 19.6 231 207-450 2-255 (267)
6 cd07497 Peptidases_S8_14 Pepti 100.0 2.7E-43 5.9E-48 366.0 16.8 223 214-444 1-311 (311)
7 cd07484 Peptidases_S8_Thermita 100.0 2.5E-42 5.4E-47 350.2 21.8 229 201-448 15-260 (260)
8 cd05562 Peptidases_S53_like Pe 100.0 2.9E-42 6.3E-47 352.8 19.6 233 211-460 1-266 (275)
9 KOG1153|consensus 100.0 1.9E-42 4E-47 356.7 17.4 333 51-440 78-456 (501)
10 cd07481 Peptidases_S8_Bacillop 100.0 1.1E-41 2.3E-46 346.9 19.2 223 214-445 1-264 (264)
11 cd07487 Peptidases_S8_1 Peptid 100.0 1.7E-41 3.6E-46 344.0 20.0 224 214-445 1-264 (264)
12 cd07493 Peptidases_S8_9 Peptid 100.0 1.1E-41 2.4E-46 346.1 17.9 222 216-445 1-261 (261)
13 cd04077 Peptidases_S8_PCSK9_Pr 100.0 1.5E-41 3.2E-46 343.8 18.4 220 207-445 17-254 (255)
14 cd07483 Peptidases_S8_Subtilis 100.0 4.5E-41 9.8E-46 347.1 18.8 217 215-445 1-291 (291)
15 cd07489 Peptidases_S8_5 Peptid 100.0 1.5E-40 3.3E-45 346.3 20.8 235 203-450 1-271 (312)
16 cd07485 Peptidases_S8_Fervidol 100.0 1.5E-40 3.3E-45 340.0 19.6 222 206-443 1-273 (273)
17 cd07494 Peptidases_S8_10 Pepti 100.0 3.1E-40 6.7E-45 341.7 19.9 232 197-449 3-287 (298)
18 cd07490 Peptidases_S8_6 Peptid 100.0 5.3E-40 1.2E-44 331.7 19.8 225 216-445 1-254 (254)
19 cd07496 Peptidases_S8_13 Pepti 100.0 4.1E-40 8.9E-45 338.9 18.7 212 216-443 1-285 (285)
20 cd07477 Peptidases_S8_Subtilis 100.0 8.5E-40 1.8E-44 324.9 20.0 213 216-443 1-229 (229)
21 cd04059 Peptidases_S8_Protein_ 100.0 1.5E-39 3.3E-44 336.0 19.5 228 201-445 25-297 (297)
22 cd07491 Peptidases_S8_7 Peptid 100.0 7.5E-40 1.6E-44 330.1 16.6 193 214-426 2-228 (247)
23 cd04843 Peptidases_S8_11 Pepti 100.0 9.6E-40 2.1E-44 334.6 17.5 222 202-445 2-277 (277)
24 cd07498 Peptidases_S8_15 Pepti 100.0 1.9E-39 4E-44 325.6 19.3 211 217-443 1-242 (242)
25 cd07475 Peptidases_S8_C5a_Pept 100.0 1.5E-39 3.2E-44 343.4 19.1 232 206-445 1-317 (346)
26 cd04847 Peptidases_S8_Subtilis 100.0 8.7E-40 1.9E-44 337.4 16.3 227 217-445 1-291 (291)
27 cd04852 Peptidases_S8_3 Peptid 100.0 1.3E-39 2.7E-44 338.7 15.6 217 201-445 11-307 (307)
28 cd07474 Peptidases_S8_subtilis 100.0 8.6E-39 1.9E-43 329.9 20.6 233 214-453 1-278 (295)
29 cd04857 Peptidases_S8_Tripepti 100.0 1.2E-38 2.6E-43 338.9 19.7 190 250-447 183-412 (412)
30 cd07482 Peptidases_S8_Lantibio 100.0 1.9E-38 4E-43 326.9 18.2 215 216-443 1-294 (294)
31 cd07478 Peptidases_S8_CspA-lik 100.0 2.6E-38 5.7E-43 344.4 18.8 239 212-458 1-454 (455)
32 cd04842 Peptidases_S8_Kp43_pro 100.0 1.5E-38 3.3E-43 327.5 15.2 226 210-445 2-293 (293)
33 cd07473 Peptidases_S8_Subtilis 100.0 1.1E-37 2.4E-42 315.7 20.1 217 215-445 2-259 (259)
34 cd07492 Peptidases_S8_8 Peptid 100.0 2.7E-37 5.9E-42 306.3 18.7 204 216-445 1-222 (222)
35 cd07480 Peptidases_S8_12 Pepti 100.0 3.6E-37 7.8E-42 318.9 19.9 223 210-442 3-269 (297)
36 cd04848 Peptidases_S8_Autotran 100.0 1.3E-36 2.8E-41 307.5 18.7 222 213-445 1-267 (267)
37 PF00082 Peptidase_S8: Subtila 100.0 1.9E-35 4.2E-40 302.0 10.6 233 218-458 1-272 (282)
38 cd07488 Peptidases_S8_2 Peptid 100.0 1.9E-31 4.1E-36 268.7 12.8 207 220-440 5-237 (247)
39 cd00306 Peptidases_S8_S53 Pept 100.0 2.6E-30 5.7E-35 255.1 19.7 213 217-443 1-241 (241)
40 KOG1114|consensus 100.0 2.2E-28 4.8E-33 268.7 20.0 206 253-469 311-556 (1304)
41 KOG3526|consensus 99.9 1E-24 2.2E-29 220.5 13.2 300 114-446 88-420 (629)
42 COG1404 AprE Subtilisin-like s 99.9 1E-23 2.2E-28 229.6 19.8 234 201-446 126-398 (508)
43 cd04056 Peptidases_S53 Peptida 99.7 5.1E-17 1.1E-21 172.9 16.0 223 195-429 4-299 (361)
44 KOG3525|consensus 98.5 4.7E-07 1E-11 98.3 11.5 279 201-488 19-332 (431)
45 COG4934 Predicted protease [Po 98.5 7.8E-07 1.7E-11 104.0 11.2 167 195-365 208-395 (1174)
46 PF05922 Inhibitor_I9: Peptida 98.3 2.7E-06 5.9E-11 70.6 7.8 74 55-134 1-81 (82)
47 PF08121 Toxin_33: Waglerin fa 40.0 16 0.00036 22.0 1.0 12 527-538 8-20 (22)
48 PRK02230 inorganic pyrophospha 31.2 89 0.0019 30.4 5.0 23 524-547 35-59 (184)
49 PLN02373 soluble inorganic pyr 29.6 88 0.0019 30.5 4.8 57 482-547 21-79 (188)
50 KOG4266|consensus 24.8 31 0.00067 39.1 0.8 50 462-511 193-242 (1033)
51 COG1570 XseA Exonuclease VII, 24.6 2.4E+02 0.0052 31.1 7.5 71 272-346 160-237 (440)
52 cd00412 pyrophosphatase Inorga 23.6 1.1E+02 0.0024 28.9 4.1 22 525-547 34-57 (155)
53 PF05964 FYRN: F/Y-rich N-term 22.9 24 0.00052 27.0 -0.4 18 518-535 11-32 (54)
54 PF02601 Exonuc_VII_L: Exonucl 22.0 3E+02 0.0065 28.6 7.6 71 272-346 39-119 (319)
No 1
>KOG4266|consensus
Probab=100.00 E-value=5.2e-120 Score=949.33 Aligned_cols=517 Identities=53% Similarity=0.898 Sum_probs=481.4
Q ss_pred eeeecc-cccceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccH-----HHHHHHh
Q psy15698 45 KCKQKC-NLHKEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVT-----AALSSLL 118 (577)
Q Consensus 45 ~~~~~~-~v~~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~-----~~~~~L~ 118 (577)
+..|+. +++.||||.|+.++.+..|..||+++|+.. .+.+|.|++|.|++.+||+||.++.++... -.++.|+
T Consensus 40 ~~~f~~tvve~EyIv~F~~y~~Ak~r~syi~skl~gS-~VtnWriipR~Npa~~YPsDF~vl~i~e~~k~~~~~~ierLe 118 (1033)
T KOG4266|consen 40 LNPFNVTVVESEYIVRFKQYKPAKDRRSYIESKLRGS-GVTNWRIIPRINPATKYPSDFGVLWIEESGKEAVVGEIERLE 118 (1033)
T ss_pred cCccceeeecceeEEEecccccchHHHHHHHHHhhcC-CCCceeEeeccCccccCCCccceEEEeccCccchhheeeehh
Confidence 345666 899999999999999999999999999977 688999999999999999999999998764 3488999
Q ss_pred cCCCeEEEecCeEEEcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchh
Q psy15698 119 EHPLIKRVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQI 198 (577)
Q Consensus 119 ~~p~V~~Vep~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~ 198 (577)
.+|+|+.|.|++++.+.+.+... ...|+|.....+-|+..++.++..... .|+..+|+ +...+.++
T Consensus 119 ~hp~vk~v~pqr~V~r~l~y~~~------~~~p~n~t~~~~~~qg~~~~r~a~~s~---~~~n~~RH-----l~a~~rQv 184 (1033)
T KOG4266|consen 119 MHPDVKVVFPQRRVLRGLSYPDG------KKRPGNITTSMSFEQGTESSRMADTSN---TTLNWSRH-----LLAQKRQV 184 (1033)
T ss_pred cCCCceeecchhhhhhccccccc------CCCCCcceeeeeccccccccCCccccc---cccccchh-----hhhhhHHH
Confidence 99999999999999998875442 223777776666676555555554443 66666655 45667899
Q ss_pred hhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEe
Q psy15698 199 TSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELH 278 (577)
Q Consensus 199 ~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~ 278 (577)
++.++++-+|++|+||++|+|||+|||+..+||+|+++.++.+|+++++.+|..||||+|||+||+...|.|+||+++|+
T Consensus 185 ~s~l~Ad~LWk~GyTGa~VkvAiFDTGl~~~HPHFrnvKERTNWTNE~tLdD~lgHGTFVAGvia~~~ec~gfa~d~e~~ 264 (1033)
T KOG4266|consen 185 TSMLGADHLWKKGYTGAKVKVAIFDTGLRADHPHFRNVKERTNWTNEDTLDDNLGHGTFVAGVIAGRNECLGFASDTEIY 264 (1033)
T ss_pred HHHhchhhHHhccccCCceEEEEeecccccCCccccchhhhcCCcCccccccCcccceeEeeeeccchhhcccCCcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred EEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCC
Q psy15698 279 IFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQM 358 (577)
Q Consensus 279 ~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~ 358 (577)
++|||.+.+.++++|+++||+||+..+++|+|+|+|+|++++.+|.+.++++.+++|+||.|+||+|+.++++++|+++.
T Consensus 265 ~frvft~~qVSYTSWFLDAFNYAI~~kidvLNLSIGGPDfmD~PFVeKVwEltAnNvIMvSAiGNDGPLYGTLNNPaDQs 344 (1033)
T KOG4266|consen 265 AFRVFTDAQVSYTSWFLDAFNYAIATKIDVLNLSIGGPDFMDLPFVEKVWELTANNVIMVSAIGNDGPLYGTLNNPADQS 344 (1033)
T ss_pred EEEeeccceeehhhHHHHHHHHHHhhhcceEeeccCCcccccchHHHHHHhhccCcEEEEEecCCCCcceeecCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCC-------------------
Q psy15698 359 DVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTN------------------- 409 (577)
Q Consensus 359 ~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS------------------- 409 (577)
.||.||+++.++++|.|||||+++||+|.|+||+||||+++|.+|.+ ||||
T Consensus 345 DViGVGGIdfdD~IA~FSSRGMtTWELP~GYGRmkpDiVtYG~~v~GS~v~~GCr~LSGTSVaSPVVAGav~LLvS~~~q 424 (1033)
T KOG4266|consen 345 DVIGVGGIDFDDHIASFSSRGMTTWELPHGYGRMKPDIVTYGRDVMGSKVSTGCRSLSGTSVASPVVAGAVCLLVSVEAQ 424 (1033)
T ss_pred ceeeeccccccchhhhhccCCcceeecCCcccccCCceEeeccccccCcccccchhccCCcccchhhhceeeeEeeehee
Confidence 99999999999999999999999999999999999999999999975 5777
Q ss_pred -----------------------------------------------------------cccccCCccccccccccCCCc
Q psy15698 410 -----------------------------------------------------------GECQYMWPYCTQPLYHGAIPI 430 (577)
Q Consensus 410 -----------------------------------------------------------~A~P~VaG~a~~aL~~~~~P~ 430 (577)
..|||+|++|.+.|+..++|.
T Consensus 425 k~dl~NPASmKQaLiegA~kLpg~NMfEQGaGkldLL~syqiL~SYkP~asl~PsylD~t~cpYmWPycsQPlYyG~mp~ 504 (1033)
T KOG4266|consen 425 KKDLLNPASMKQALIEGAAKLPGPNMFEQGAGKLDLLESYQILKSYKPRASLFPSYLDYTDCPYMWPYCSQPLYYGAMPI 504 (1033)
T ss_pred hhhccCHHHHHHHHHhHHhhCCCCchhhccCcchhHHHHHHHHHhcCCCceecchhcccccCcccCccccCccccCCcce
Confidence 899999999999999999999
Q ss_pred ccHHHHHHHHhhcceecCCCccccCCCCCCccceeecccCCc----------------cccccccccccceeeEEEeecC
Q psy15698 431 IVNVTILNGMGVVGKILERPKWYPYLPHNGEFLEVSIRGSGV----------------KVAVFDTGLSSGHTGFNNVAER 494 (577)
Q Consensus 431 l~~~~i~~~l~~ta~~~~~~~~~p~~~~~g~~l~~~~~~~~~----------------~~~~~~~g~~~g~~~~~v~~~~ 494 (577)
+.+.+|+++|.+|+++++.|.|+|++..+|.+|.++|.|+.+ +++.| +|+++|+|+++|.+|+
T Consensus 505 i~NvTILNGmgVtg~Iv~~P~W~P~~e~qG~~l~v~f~ys~viWPWtGyla~~i~vkkega~f-eG~~~G~vtv~v~Sp~ 583 (1033)
T KOG4266|consen 505 IFNVTILNGMGVTGYIVSPPTWHPANEEQGNLLSVHFKYSDVIWPWTGYLALHIQVKKEGAQF-EGEIEGNVTVKVYSPP 583 (1033)
T ss_pred EEEEEEecccceeeEecCCCCCccCccccCceEEEEEecCCcccccccceEEEEEeeeccccc-eeEeeeeEEEEEecCc
Confidence 999999999999999999999999999999999999999998 89999 9999999999999999
Q ss_pred CC-CCccceeEeeceeEE-EE---eCceeEeeeccccCCCCCCCCCCCCCCCCCCCCCcCCCCCCcchHHHHHhcc-chh
Q psy15698 495 TD-WTNENTLEDKLGHGT-FV---AGIKRILWDQYHNLRYPQGYFPRDNLKMKNDPLDWNGDHVHTNFKYEQRKAP-SDW 568 (577)
Q Consensus 495 ~~-~~~~~~~~~~~p~~~-ii---pr~~~i~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 568 (577)
.. +..++++++.||+++ || ||.|||||||||||||||||||||+|++|||||||||||||||||+||+||| .||
T Consensus 584 ~t~~~~~~~stv~lplk~KviPtPPR~KRiLWDQyHslrYPPgYiPRD~L~vknDpLDW~gDHiHTNFrdMY~hLR~~GY 663 (1033)
T KOG4266|consen 584 ATGESGPRRSTVSLPLKLKVIPTPPRAKRILWDQYHSLRYPPGYIPRDSLDVKNDPLDWHGDHIHTNFRDMYNHLRDAGY 663 (1033)
T ss_pred ccCCCCCceeEEeeeeEEEeccCCCcccchhhhhhccccCCCCCCCcccccccCCccccccccccccHHHHHHHHHhcce
Confidence 87 677899999999999 98 9999999999999999999999999999999999999999999999999995 699
Q ss_pred hHhhhcCCC
Q psy15698 569 FKDFCSSQF 577 (577)
Q Consensus 569 ~~~~~~~~~ 577 (577)
|+|+||+-|
T Consensus 664 yievLg~Pf 672 (1033)
T KOG4266|consen 664 YIEVLGSPF 672 (1033)
T ss_pred ehhhhcCCc
Confidence 999999976
No 2
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins. SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem
Probab=100.00 E-value=1.8e-51 Score=416.81 Aligned_cols=239 Identities=70% Similarity=1.163 Sum_probs=223.3
Q ss_pred HhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCCCCCCCCCchhhhHhhhcc-CCCccccCCCCcEeEEEEecCC
Q psy15698 208 WDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGLIAS-SQRCLGFAPDAELHIFRVFTNQ 286 (577)
Q Consensus 208 w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~D~~gHGT~VAGiIag-~~~~~GvAP~A~l~~~kv~~~~ 286 (577)
|+++++|+||+|||||+||+.+||+|+++....+|.++....|..||||||||||++ ..++.||||+|+|+.+|++++.
T Consensus 1 W~~g~tG~gv~VaviDsGv~~~hp~l~~~~~~~~~~~~~~~~d~~gHGT~VAGiIa~~~~~~~GvAp~a~l~~~~v~~~~ 80 (255)
T cd07479 1 WQLGYTGAGVKVAVFDTGLAKDHPHFRNVKERTNWTNEKTLDDGLGHGTFVAGVIASSREQCLGFAPDAEIYIFRVFTNN 80 (255)
T ss_pred CCCCCCCCCCEEEEEeCCCCCCCcchhccccccccCCCCCCCCCCCcHHHHHHHHHccCCCceeECCCCEEEEEEeecCC
Confidence 788999999999999999999999999888888888887788889999999999999 4457999999999999999988
Q ss_pred CCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeee
Q psy15698 287 QVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGI 366 (577)
Q Consensus 287 g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~ 366 (577)
+.+..++++++|+||++++++|||||||++.+.+.++.+++.++.++|+++|+||||+|+.++++.+|+..++||+|||+
T Consensus 81 ~~~~~~~~~~a~~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~gi~vV~aaGN~g~~~~~~~~Pa~~~~vi~Vga~ 160 (255)
T cd07479 81 QVSYTSWFLDAFNYAILTKIDVLNLSIGGPDFMDKPFVDKVWELTANNIIMVSAIGNDGPLYGTLNNPADQMDVIGVGGI 160 (255)
T ss_pred CCchHHHHHHHHHhhhhcCCCEEEeeccCCCCCCcHHHHHHHHHHHCCcEEEEEcCCCCCCcccccCcccCCCceEEeee
Confidence 88888999999999999999999999999876677899999999999999999999999877788899999999999999
Q ss_pred cCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCCC----ccc
Q psy15698 367 NFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIP----IIV 432 (577)
Q Consensus 367 ~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P----~l~ 432 (577)
+.+++++.|||+|+.+|.+|.++|+.||||+|||.+|.+ +|||||+|+|+| ++||+++.+| .++
T Consensus 161 ~~~~~~~~~S~~g~~~~~~p~~~g~~~~di~apG~~i~~~~~~~~~~~~sGTS~AaP~VaG--~aAll~s~~p~~~~~~~ 238 (255)
T cd07479 161 DFDDNIARFSSRGMTTWELPGGYGRVKPDIVTYGSGVYGSKLKGGCRALSGTSVASPVVAG--AVALLLSTVPEKRDLIN 238 (255)
T ss_pred ccCCccccccCCCCCcccccCCCCCcCccEEecCCCeeccccCCCeEEeccHHHHHHHHHH--HHHHHHHhCccccCCCC
Confidence 999999999999999999999999999999999999863 799999999999 7799999998 799
Q ss_pred HHHHHHHHhhcceecC
Q psy15698 433 NVTILNGMGVVGKILE 448 (577)
Q Consensus 433 ~~~i~~~l~~ta~~~~ 448 (577)
+.+|++.|..+|+.+.
T Consensus 239 p~~vk~~L~~sA~~~~ 254 (255)
T cd07479 239 PASMKQALIESATRLP 254 (255)
T ss_pred HHHHHHHHHhhcccCC
Confidence 9999999999998764
No 3
>PTZ00262 subtilisin-like protease; Provisional
Probab=100.00 E-value=1.5e-45 Score=403.81 Aligned_cols=266 Identities=14% Similarity=0.197 Sum_probs=211.1
Q ss_pred cccccccccccCcchhhhccCchHHHhc--CCCCCCcEEEEEcCCCCCCCCCCCCCC-----------------------
Q psy15698 183 GRLTSRRLLKTVPRQITSILQANTLWDL--GIRGSGVKVAVFDTGLSSGHTGFNNVA----------------------- 237 (577)
Q Consensus 183 ~~~~~r~~~~~~p~~~~~~i~~~~~w~~--g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------- 237 (577)
+|..........+|.+ +.++++++|+. +.+|+||+|||||||||++||||.+.+
T Consensus 283 ~~~~~ND~~~~~qWgL-d~i~~~~aw~~~~~~~g~gV~VAVIDTGID~~HPDL~~ni~~n~~el~GrdgiDdD~nG~vdd 361 (639)
T PTZ00262 283 GKYQFNDEGRNLQWGL-DLTRLDETQELIEPHEVNDTNICVIDSGIDYNHPDLHDNIDVNVKELHGRKGIDDDNNGNVDD 361 (639)
T ss_pred cccccCCCCcccCcCc-chhCchHHHHHhhccCCCCcEEEEEccCCCCCChhhhhhcccccccccCccccccccCCcccc
Confidence 3333334444556665 46899999984 568999999999999999999998422
Q ss_pred -CCccCCCC-CCCCCCCCchhhhHhhhcc----CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEe
Q psy15698 238 -ERTDWTNE-NTLEDKLGHGTFVAGLIAS----SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNL 311 (577)
Q Consensus 238 -~~~~~~~~-~~~~D~~gHGT~VAGiIag----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~ 311 (577)
.+++|+++ ..+.|.+|||||||||||| +.++.||||+|+|+++|+++..+.+..+++++||+||+++|++||||
T Consensus 362 ~~G~nfVd~~~~P~D~~GHGTHVAGIIAA~gnN~~Gi~GVAP~AkLi~vKVld~~G~G~~sdI~~AI~yA~~~GA~VINm 441 (639)
T PTZ00262 362 EYGANFVNNDGGPMDDNYHGTHVSGIISAIGNNNIGIVGVDKRSKLIICKALDSHKLGRLGDMFKCFDYCISREAHMING 441 (639)
T ss_pred cccccccCCCCCCCCCCCcchHHHHHHhccccCCCceeeeecccccceEEEecCCCCccHHHHHHHHHHHHHCCCCEEEe
Confidence 13455543 3467889999999999998 35689999999999999999988889999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCC------------CCCCCC----CCCCeEEEeeecCCCC----
Q psy15698 312 SIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYG------------TLNNPA----DQMDVIGVGGINFEDQ---- 371 (577)
Q Consensus 312 S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~------------~~~~Pa----~~~~vI~VGA~~~~~~---- 371 (577)
|||+..+ +..+.+++.+|.++|+++|+||||+|.... ...||+ ..++||+|||++.+..
T Consensus 442 SlG~~~~-s~~l~~AV~~A~~kGILVVAAAGN~g~~~~s~p~~~~~d~~~~~~YPaa~s~~~~nVIaVGAv~~d~~~~~s 520 (639)
T PTZ00262 442 SFSFDEY-SGIFNESVKYLEEKGILFVVSASNCSHTKESKPDIPKCDLDVNKVYPPILSKKLRNVITVSNLIKDKNNQYS 520 (639)
T ss_pred ccccCCc-cHHHHHHHHHHHHCCCEEEEeCCCCCCCcccccccccccccccccCChhhhccCCCEEEEeeccCCCCCccc
Confidence 9998753 567899999999999999999999986321 124676 4689999999986321
Q ss_pred ccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCCCcccHHHHHHHHh
Q psy15698 372 IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMG 441 (577)
Q Consensus 372 ~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~ 441 (577)
.+.+|+|| ..++||+|||++|++ +|||||||||+| ++||+++.+|.+++.+|+++|.
T Consensus 521 ~s~~Snyg-----------~~~VDIaAPG~dI~St~p~g~Y~~~SGTSmAAP~VAG--vAALLlS~~P~LT~~qV~~iL~ 587 (639)
T PTZ00262 521 LSPNSFYS-----------AKYCQLAAPGTNIYSTFPKNSYRKLNGTSMAAPHVAA--IASLILSINPSLSYEEVIRILK 587 (639)
T ss_pred ccccccCC-----------CCcceEEeCCCCeeeccCCCceeecCCCchhHHHHHH--HHHHHHhhCCCCCHHHHHHHHH
Confidence 23445555 234999999999985 799999999999 7799999999999999999999
Q ss_pred hcceecCCCccccCCCCCCccceee
Q psy15698 442 VVGKILERPKWYPYLPHNGEFLEVS 466 (577)
Q Consensus 442 ~ta~~~~~~~~~p~~~~~g~~l~~~ 466 (577)
.|+..+.. ....++| ++.+++.
T Consensus 588 ~TA~~l~~--~~n~~~w-gG~LDa~ 609 (639)
T PTZ00262 588 ESIVQLPS--LKNKVKW-GGYLDIH 609 (639)
T ss_pred HhCccCCC--CCCcccc-CcEEcHH
Confidence 99987643 2233344 3455543
No 4
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.3e-44 Score=363.31 Aligned_cols=224 Identities=24% Similarity=0.317 Sum_probs=197.3
Q ss_pred cEEEEEcCCCCCCCCCCCCC-CCCccCCCCCCCCCCCCchhhhHhhhccC-CCccccCCCCcEeEEEEecCCC---CCch
Q psy15698 217 VKVAVFDTGLSSGHTGFNNV-AERTDWTNENTLEDKLGHGTFVAGLIASS-QRCLGFAPDAELHIFRVFTNQQ---VSYT 291 (577)
Q Consensus 217 V~VaViDtGid~~Hpdl~~~-~~~~~~~~~~~~~D~~gHGT~VAGiIag~-~~~~GvAP~A~l~~~kv~~~~g---~~~~ 291 (577)
|+||||||||+.+||+|+.. +....+... ...|..+|||||||||++. ....|+||+|+|+.+|++...+ .++.
T Consensus 1 V~VavIDsGvd~~hp~l~~~~~~~~~~~~~-~~~~~~~HGT~vAgiia~~~~~~~Gvap~a~i~~~~v~~~~~~~~~~~~ 79 (239)
T cd05561 1 VRVGMIDTGIDTAHPALSAVVIARLFFAGP-GAPAPSAHGTAVASLLAGAGAQRPGLLPGADLYGADVFGRAGGGEGASA 79 (239)
T ss_pred CEEEEEeCCCCCCCcccccCccccccCCCC-CCCCCCCCHHHHHHHHhCCCCCCcccCCCCEEEEEEEecCCCCCCCcCH
Confidence 79999999999999999743 333333332 5667789999999999992 2337999999999999998653 4567
Q ss_pred HHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCC
Q psy15698 292 SWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQ 371 (577)
Q Consensus 292 ~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~ 371 (577)
..+++||+||+++|++|||||||++. +..+.++++++.++|+++|+||||+|... ...+|+.+++||+||+++.++.
T Consensus 80 ~~i~~ai~~a~~~g~~VIn~S~g~~~--~~~l~~ai~~a~~~gilvv~AaGN~g~~~-~~~~Pa~~~~vi~V~a~~~~~~ 156 (239)
T cd05561 80 LALARALDWLAEQGVRVVNISLAGPP--NALLAAAVAAAAARGMVLVAAAGNDGPAA-PPLYPAAYPGVIAVTAVDARGR 156 (239)
T ss_pred HHHHHHHHHHHHCCCCEEEeCCCCCC--CHHHHHHHHHHHHCCCEEEEecCCCCCCC-CccCcccCCCceEEEeecCCCC
Confidence 88999999999999999999999865 57788999999999999999999999753 4569999999999999999999
Q ss_pred ccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCCCcccHHHHHHHHh
Q psy15698 372 IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMG 441 (577)
Q Consensus 372 ~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~ 441 (577)
++.||++|+. +||+|||.+|.+ +|||||+|+|+| ++||+++++| +++.+|++.|.
T Consensus 157 ~~~~s~~g~~------------~di~ApG~~i~~~~~~~~~~~~sGTS~AaP~vaG--~aAll~~~~p-~~~~~i~~~L~ 221 (239)
T cd05561 157 LYREANRGAH------------VDFAAPGVDVWVAAPGGGYRYVSGTSFAAPFVTA--ALALLLQASP-LAPDDARARLA 221 (239)
T ss_pred ccccCCCCCc------------ceEEccccceecccCCCCEEEeCCHHHHHHHHHH--HHHHHHhcCC-CCHHHHHHHHH
Confidence 9999999976 899999999974 899999999999 7799999999 99999999999
Q ss_pred hcceecCCCccccCCCCC
Q psy15698 442 VVGKILERPKWYPYLPHN 459 (577)
Q Consensus 442 ~ta~~~~~~~~~p~~~~~ 459 (577)
.||.+++.+++++.+||+
T Consensus 222 ~ta~~~g~~~~d~~~G~G 239 (239)
T cd05561 222 ATAKDLGPPGRDPVFGYG 239 (239)
T ss_pred HHhhccCCCCcCCCcCCC
Confidence 999999999999998873
No 5
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=100.00 E-value=6.6e-43 Score=356.31 Aligned_cols=231 Identities=20% Similarity=0.229 Sum_probs=197.9
Q ss_pred HHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC-CC-ccCC-CCCCCCCCCCchhhhHhhhcc--CCCccccCCCCcEeEEE
Q psy15698 207 LWDLGIRGSGVKVAVFDTGLSSGHTGFNNVA-ER-TDWT-NENTLEDKLGHGTFVAGLIAS--SQRCLGFAPDAELHIFR 281 (577)
Q Consensus 207 ~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~-~~-~~~~-~~~~~~D~~gHGT~VAGiIag--~~~~~GvAP~A~l~~~k 281 (577)
+|+.+++|+||+|||||+||+.+||+|+... .. ..+. ......|..+|||||||+|+| ..++.||||+|+|+.+|
T Consensus 2 lw~~g~~g~gV~VaViDsGid~~hp~l~~~~~~~~~~~~~~~~~~~~~~gHGT~VAgii~g~~~~~~~GvAp~a~i~~~~ 81 (267)
T cd07476 2 LFAFGGGDPRITIAILDGPVDRTHPCFRGANLTPLFTYAAAACQDGGASAHGTHVASLIFGQPCSSVEGIAPLCRGLNIP 81 (267)
T ss_pred ceeccCCCCCeEEEEeCCCcCCCChhhCCCccccccCccccCCCCCCCCCcHHHHHHHHhcCCCCCceeECcCCeEEEEE
Confidence 6999999999999999999999999998532 11 1111 223456778999999999998 33678999999999999
Q ss_pred EecCCCCCc-hHHHHHHHHHHHHCCCcEEEeCCCCCC---CCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCC
Q psy15698 282 VFTNQQVSY-TSWFLDAFNYAILKKMDVLNLSIGGPD---FMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQ 357 (577)
Q Consensus 282 v~~~~g~~~-~~~~~~ai~~a~~~g~~ViN~S~G~~~---~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~ 357 (577)
++...+... ...+++||+||+++|++|||||||... .....+.+++++|.++|+++|+||||+|. .+..+|+..
T Consensus 82 v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~AaGN~g~--~~~~~Pa~~ 159 (267)
T cd07476 82 IFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLTQTGEADPILANAVAMCQQNNVLIVAAAGNEGC--ACLHVPAAL 159 (267)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEEecCCCCC--CCCCCcccC
Confidence 998765443 678999999999999999999999753 23567889999999999999999999997 456789999
Q ss_pred CCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccC
Q psy15698 358 MDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGA 427 (577)
Q Consensus 358 ~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~ 427 (577)
+++|+|||++.++.+..||++|+. ..++||+|||.+|.+ +|||||||+|+| ++||+++.
T Consensus 160 ~~vi~Vga~~~~~~~~~~s~~g~~---------~~~~~l~ApG~~i~~~~~~~~~~~~sGTS~AaP~vaG--~aALl~s~ 228 (267)
T cd07476 160 PSVLAVGAMDDDGLPLKFSNWGAD---------YRKKGILAPGENILGAALGGEVVRRSGTSFAAAIVAG--IAALLLSL 228 (267)
T ss_pred CceEEEEeecCCCCeeeecCCCCC---------CCCceEEecCCCceeecCCCCeEEeccHHHHHHHHHH--HHHHHHHh
Confidence 999999999999999999999954 236899999999974 799999999999 77999998
Q ss_pred CCc----ccHHHHHHHHhhcceecCCC
Q psy15698 428 IPI----IVNVTILNGMGVVGKILERP 450 (577)
Q Consensus 428 ~P~----l~~~~i~~~l~~ta~~~~~~ 450 (577)
+|. +++.+|+.+|..||..++++
T Consensus 229 ~~~~~~~~~~~~vk~~L~~tA~~~~~~ 255 (267)
T cd07476 229 QLRRGAPPDPLAVRRALLETATPCDPE 255 (267)
T ss_pred hhhhCCCCCHHHHHHHHHHhCccCCCc
Confidence 877 99999999999999998854
No 6
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=2.7e-43 Score=366.01 Aligned_cols=223 Identities=25% Similarity=0.268 Sum_probs=173.4
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCC---------------CCccCCCC--CCCCCCCCchhhhHhhhccCC----------
Q psy15698 214 GSGVKVAVFDTGLSSGHTGFNNVA---------------ERTDWTNE--NTLEDKLGHGTFVAGLIASSQ---------- 266 (577)
Q Consensus 214 G~gV~VaViDtGid~~Hpdl~~~~---------------~~~~~~~~--~~~~D~~gHGT~VAGiIag~~---------- 266 (577)
|+||+||||||||+.+||||.... .++++... ....|.+||||||||||+|..
T Consensus 1 G~gV~VaViDTGid~~HPdl~~~~~~~~~~~~d~~~~~~~g~d~~~~~~~~~~D~~gHGThvAGiiag~~~~~~~~~~~~ 80 (311)
T cd07497 1 GEGVVIAIVDTGVDYSHPDLDIYGNFSWKLKFDYKAYLLPGMDKWGGFYVIMYDFFSHGTSCASVAAGRGKMEYNLYGYT 80 (311)
T ss_pred CCCeEEEEEeCCcCCCChhHhcccCCCcccccCcCCCccCCcCCCCCccCCCCCccccchhHHHHHhccCcccccccccc
Confidence 799999999999999999996321 12233322 235788999999999999832
Q ss_pred ---CccccCCCCcEeEEEEecCCCCCchHHHHH-------HHHHH--HHCCCcEEEeCCCCCCCC-------CHHHHHHH
Q psy15698 267 ---RCLGFAPDAELHIFRVFTNQQVSYTSWFLD-------AFNYA--ILKKMDVLNLSIGGPDFM-------DFPFVDKV 327 (577)
Q Consensus 267 ---~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~-------ai~~a--~~~g~~ViN~S~G~~~~~-------~~~~~~ai 327 (577)
++.||||+|+|+++|++...+......+.. +++|+ .+++++|||||||..... .......+
T Consensus 81 ~~~g~~GVAP~A~l~~vkvl~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~VIN~S~G~~~~~~~~~~~g~~~~~~~~ 160 (311)
T cd07497 81 GKFLIRGIAPDAKIAAVKALWFGDVIYAWLWTAGFDPVDRKLSWIYTGGPRVDVISNSWGISNFAYTGYAPGLDISSLVI 160 (311)
T ss_pred cccceeeeCCCCEEEEEEEEecCCcchhhhhhhccchhhhhhhhhhccCCCceEEEecCCcCCCCccccccCcCHHHHHH
Confidence 578999999999999997654433222222 34443 467999999999975321 11122223
Q ss_pred HHH-HcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecC---------------CCCccCCCCCCCCCCcCCCCCCC
Q psy15698 328 WEL-TANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINF---------------EDQIAKFSSRGMTAWELPGGYGR 391 (577)
Q Consensus 328 ~~a-~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~---------------~~~~a~fS~~G~~~~~~p~~~g~ 391 (577)
.++ .++|+++|+||||+|+...++.+|+..+++|+|||++. .+.++.||+|||+ .+|+
T Consensus 161 d~~~~~~Gv~vV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~fSs~Gp~------~~g~ 234 (311)
T cd07497 161 DALVTYTGVPIVSAAGNGGPGYGTITAPGAASLAISVGAATNFDYRPFYLFGYLPGGSGDVVSWSSRGPS------IAGD 234 (311)
T ss_pred HHHHhcCCCEEEEeCCCCCCCCccccCccCCCCeEEEEeccCCcccchhhhccccCCCCCccccccCCCC------cccC
Confidence 222 37899999999999998778899999999999999974 3567899999955 4799
Q ss_pred ccccEEecCCcee--------------------cCcCCcccccCCccccccccccCCC------cccHHHHHHHHhhcc
Q psy15698 392 VKPDIVTYGSAVR--------------------GPSTNGECQYMWPYCTQPLYHGAIP------IIVNVTILNGMGVVG 444 (577)
Q Consensus 392 ~kpDi~ApG~~I~--------------------ssGTS~A~P~VaG~a~~aL~~~~~P------~l~~~~i~~~l~~ta 444 (577)
+||||+|||.+|+ .+|||||+|||+| ++||+++++| .+++.+|+++|..||
T Consensus 235 ~kPdv~ApG~~i~s~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VaG--~aALll~~~~~~~~~~~~~~~~vk~~L~~tA 311 (311)
T cd07497 235 PKPDLAAIGAFAWAPGRVLDSGGALDGNEAFDLFGGTSMATPMTAG--SAALVISALKEKEGVGEYDPFLVRTILMSTA 311 (311)
T ss_pred CCCceeccCcceEeecccCCCCcccCCCcceeeecchhhhhHHHHH--HHHHHHHHhhhhcCCCCCCHHHHHHHHHhcC
Confidence 9999999998764 2699999999999 6799999876 689999999999886
No 7
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=100.00 E-value=2.5e-42 Score=350.24 Aligned_cols=229 Identities=25% Similarity=0.358 Sum_probs=205.2
Q ss_pred ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC--CCCCccCCCCC-CCCCCCCchhhhHhhhcc----CCCccccCC
Q psy15698 201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN--VAERTDWTNEN-TLEDKLGHGTFVAGLIAS----SQRCLGFAP 273 (577)
Q Consensus 201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~--~~~~~~~~~~~-~~~D~~gHGT~VAGiIag----~~~~~GvAP 273 (577)
.++++.+|+.+ +|+||+|+|||+|++.+||+|.+ +...+++.+.. ...|..+|||||||+|++ ..++.|+||
T Consensus 15 ~~~~~~~~~~~-~G~gv~I~viDsGi~~~h~~l~~~~~~~~~~~~~~~~~~~d~~~HGT~vagii~~~~~~~~~~~Giap 93 (260)
T cd07484 15 QIGAPKAWDIT-GGSGVTVAVVDTGVDPTHPDLLKVKFVLGYDFVDNDSDAMDDNGHGTHVAGIIAAATNNGTGVAGVAP 93 (260)
T ss_pred ccChHHHHhhc-CCCCCEEEEEeCCCCCCCcccccCCcccceeccCCCCCCCCCCCcHHHHHHHHhCccCCCCceEeECC
Confidence 47899999998 99999999999999999999853 44455555433 366788999999999988 346789999
Q ss_pred CCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCC
Q psy15698 274 DAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNN 353 (577)
Q Consensus 274 ~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~ 353 (577)
+|+|+.+|+++..+.+....++++++++++++++|||||||... ....+.+++.++.++|++||+||||+|.. .+.+
T Consensus 94 ~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~~~~iin~S~g~~~-~~~~~~~~~~~a~~~gilvV~aaGN~g~~--~~~~ 170 (260)
T cd07484 94 KAKIMPVKVLDANGSGSLADIANGIRYAADKGAKVINLSLGGGL-GSTALQEAINYAWNKGVVVVAAAGNEGVS--SVSY 170 (260)
T ss_pred CCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCeEEEecCCCCC-CCHHHHHHHHHHHHCCCEEEEeCCCCCCC--CCCC
Confidence 99999999999888888899999999999999999999999886 46789999999999999999999999984 3689
Q ss_pred CCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccc
Q psy15698 354 PADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPL 423 (577)
Q Consensus 354 Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL 423 (577)
|+..+++|+||+++..++++.||++|+. +|++|||.++.+ +|||||||+|+| ++||
T Consensus 171 pa~~~~vi~Vga~~~~~~~~~~s~~g~~------------~~~~apG~~i~~~~~~~~~~~~~GTS~Aap~vag--~~Al 236 (260)
T cd07484 171 PAAYPGAIAVAATDQDDKRASFSNYGKW------------VDVSAPGGGILSTTPDGDYAYMSGTSMATPHVAG--VAAL 236 (260)
T ss_pred CCCCCCeEEEEeeCCCCCcCCcCCCCCC------------ceEEeCCCCcEeecCCCCEEEeeeHHHHHHHHHH--HHHH
Confidence 9999999999999999999999999976 899999998874 699999999999 7799
Q ss_pred cccCCCcccHHHHHHHHhhcceecC
Q psy15698 424 YHGAIPIIVNVTILNGMGVVGKILE 448 (577)
Q Consensus 424 ~~~~~P~l~~~~i~~~l~~ta~~~~ 448 (577)
+++.+| +++.+|+..|..||..++
T Consensus 237 ~~~~~p-~t~~~i~~~L~~tA~~~g 260 (260)
T cd07484 237 LYSQGP-LSASEVRDALKKTADDIG 260 (260)
T ss_pred HHhcCC-CCHHHHHHHHHHhCccCc
Confidence 999999 999999999999998764
No 8
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family. Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi
Probab=100.00 E-value=2.9e-42 Score=352.84 Aligned_cols=233 Identities=21% Similarity=0.188 Sum_probs=189.9
Q ss_pred CCCCCCcEEEEEcCCCCCCCC--------CCCCCCCCccCCC-CCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEE
Q psy15698 211 GIRGSGVKVAVFDTGLSSGHT--------GFNNVAERTDWTN-ENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFR 281 (577)
Q Consensus 211 g~~G~gV~VaViDtGid~~Hp--------dl~~~~~~~~~~~-~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~k 281 (577)
|++|+||+||||||||+..|| +|... .++.. .....|..+|||||||+| .||||+|+|+.++
T Consensus 1 g~tG~gv~vaviDtGvd~~~~~~~~~~~~~l~~~---~~~~~~~~~~~d~~gHGT~vAgii------~GvAP~a~l~~~~ 71 (275)
T cd05562 1 GVDGTGIKIGVISDGFDGLGDAADDQASGDLPGN---VNVLGDLDGGSGGGDEGRAMLEII------HDIAPGAELAFHT 71 (275)
T ss_pred CCCCCceEEEEEeCCccccccccccccCCCCCcc---eeeccccCCCCCCCchHHHHHHHH------hccCCCCEEEEEe
Confidence 579999999999999999766 44321 11111 234567889999999999 5899999999988
Q ss_pred EecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCC---CCHHHHHHHHHHHcC-CcEEEEecCCCCCCCCCCCCCCCC
Q psy15698 282 VFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDF---MDFPFVDKVWELTAN-RVILISAIGNDGPLYGTLNNPADQ 357 (577)
Q Consensus 282 v~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~---~~~~~~~ai~~a~~~-gilvV~AAGN~g~~~~~~~~Pa~~ 357 (577)
+.. ..+.+++||+|++++|++|||||||.... .+..+.+++.++.++ |+++|+||||+|.. .++.+|+..
T Consensus 72 ~~~-----~~~~i~~ai~~a~~~g~~Vin~S~g~~~~~~~~~~~~~~ai~~a~~~~GvlvVaAAGN~g~~-~~~~~Pa~~ 145 (275)
T cd05562 72 AGG-----GELDFAAAIRALAAAGADIIVDDIGYLNEPFFQDGPIAQAVDEVVASPGVLYFSSAGNDGQS-GSIFGHAAA 145 (275)
T ss_pred cCC-----CHHHHHHHHHHHHHcCCCEEEecccccCCCcccCCHHHHHHHHHHHcCCcEEEEeCCCCCCC-CCccCCCCC
Confidence 643 36789999999999999999999997532 245688899999887 99999999999984 566789999
Q ss_pred CCeEEEeeecCCCCccCCCCCC---------CCCCcCCCCCCCccccEEecCCc-e----------ecCcCCcccccCCc
Q psy15698 358 MDVIGVGGINFEDQIAKFSSRG---------MTAWELPGGYGRVKPDIVTYGSA-V----------RGPSTNGECQYMWP 417 (577)
Q Consensus 358 ~~vI~VGA~~~~~~~a~fS~~G---------~~~~~~p~~~g~~kpDi~ApG~~-I----------~ssGTS~A~P~VaG 417 (577)
++||+|||++..+++..||+.| +..-..|..+++.||||+|||.. + ..+|||||||+|+|
T Consensus 146 ~~vitVgA~~~~~~~~~~s~~~~~~~~s~~~~~~~~~p~~~~~~~~di~Apgg~~~~~~~~~~~~~~~sGTS~AaP~VaG 225 (275)
T cd05562 146 PGAIAVGAVDYGNTPAFGSDPAPGGTPSSFDPVGIRLPTPEVRQKPDVTAPDGVNGTVDGDGDGPPNFFGTSAAAPHAAG 225 (275)
T ss_pred CCeEEEEeeccCCCcccccccccCCCcccccCCcccCcCCCCCcCCeEEcCCcccccCCCcCCceeecccchHHHHHHHH
Confidence 9999999999988877555322 21122466678899999999753 2 23799999999999
Q ss_pred cccccccccCCCcccHHHHHHHHhhcceecCCCccccCCCCCC
Q psy15698 418 YCTQPLYHGAIPIIVNVTILNGMGVVGKILERPKWYPYLPHNG 460 (577)
Q Consensus 418 ~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~~g 460 (577)
++||+++.+|.+++.+|++.|..||+.++.+++++.+|++-
T Consensus 226 --~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~g~d~~~G~G~ 266 (275)
T cd05562 226 --VAALVLSANPGLTPADIRDALRSTALDMGEPGYDNASGSGL 266 (275)
T ss_pred --HHHHHHHhCCCCCHHHHHHHHHHhCcccCCCCCCCCcCcCc
Confidence 77999999999999999999999999999889988888743
No 9
>KOG1153|consensus
Probab=100.00 E-value=1.9e-42 Score=356.67 Aligned_cols=333 Identities=23% Similarity=0.265 Sum_probs=245.7
Q ss_pred cccceeEEEEcCCCChhHHH---HHHHHHhcCCC----CccceeEEec---------cCCCccCCC-ceeEEEEeccHHH
Q psy15698 51 NLHKEFIVTFRGYYKSAARS---RYIAAALNNSD----SVLRWEILQR---------KNPATDFPS-DFDVVLLEEVTAA 113 (577)
Q Consensus 51 ~v~~eyIV~fk~~~~~~~~~---~~i~~~l~~~~----~~~~~~iv~r---------~~~~~~~~~-~f~~~~v~~~~~~ 113 (577)
..+++|||+|+++...+..+ ++++..-.... .....-+..- ....+.+.. .|.++....+.+.
T Consensus 78 ~~~~~YiV~f~~~~~q~~~s~~~~~~~~~h~~s~~~~s~~~~f~~~d~~~s~~~~~~i~~~f~i~~~~~~~y~~~ft~~~ 157 (501)
T KOG1153|consen 78 ALPSRYIVVFKPDASQQKISAHNRWVQQSHEVSSGKLSSEDAFYVKDTSDSKSTFGGIKNVFDIGGRVFRGYTGYFTGES 157 (501)
T ss_pred ccccceEEEeCCCccHHHHHhhhHHHHHHhhhhhccccccceeEeeccccchhhhcccccccccccchhhccccccccce
Confidence 78999999999887765432 33332222110 0111111000 000011122 3555666666788
Q ss_pred HHHHhcCCCeEEEecCeEEEcccCccccccCCCCCCCCCCCCcccccccccccccccccccccccccccccccccccccc
Q psy15698 114 LSSLLEHPLIKRVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKT 193 (577)
Q Consensus 114 ~~~L~~~p~V~~Vep~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~ 193 (577)
+..++++|.++.++++..+.......- ..++...| .+.|.+++..+.-
T Consensus 158 v~~i~~~p~~~~ve~~~~v~~~~~~~i-------------------------------~~Q~~APw-gLaRvsh~~~~~y 205 (501)
T KOG1153|consen 158 VCSIRSDPLIKAVEKDSVVEVDKISTI-------------------------------MLQNNAPW-GLARVSHREKLKY 205 (501)
T ss_pred eeeeccCcceeecccccccccccccce-------------------------------ecccCCch-hhhhhcccccccc
Confidence 899999999999999998866432100 01112334 3456666554311
Q ss_pred CcchhhhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccC
Q psy15698 194 VPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFA 272 (577)
Q Consensus 194 ~p~~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvA 272 (577)
-.| ....++. ..|+||+.+|+||||+..||||.. ...+..+...+...|++||||||||+|++.. .|+|
T Consensus 206 ~~~-------~~Y~Y~~-~aG~gvtaYv~DTGVni~H~dFegRa~wGa~i~~~~~~~D~nGHGTH~AG~I~sKt--~GvA 275 (501)
T KOG1153|consen 206 DSW-------GNYVYEI-DAGKGVTAYVLDTGVNIEHPDFEGRAIWGATIPPKDGDEDCNGHGTHVAGLIGSKT--FGVA 275 (501)
T ss_pred cch-------heEEeec-ccCCCeEEEEecccccccccccccceecccccCCCCcccccCCCcceeeeeeeccc--cccc
Confidence 111 1122223 279999999999999999999994 5566777766678899999999999999966 9999
Q ss_pred CCCcEeEEEEecCCCCCchHHHHHHHHHHHHC---------CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCC
Q psy15698 273 PDAELHIFRVFTNQQVSYTSWFLDAFNYAILK---------KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGN 343 (577)
Q Consensus 273 P~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~---------g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN 343 (577)
.+++|+++||++++|.+..++++.++++++++ +..|.|||+|++. +..+.-|+..|.+.|+.|++||||
T Consensus 276 K~s~lvaVKVl~~dGsGt~Sdvi~GvE~~~k~h~~~k~~~~k~sv~NlSlGg~~--S~aLn~AV~~A~~~Gi~fa~AAGN 353 (501)
T KOG1153|consen 276 KNSNLVAVKVLRSDGSGTVSDVIKGVEFVVKHHEKKKKKEGKKSVANLSLGGFR--SAALNMAVNAASERGIHFAVAAGN 353 (501)
T ss_pred cccceEEEEEeccCCcEeHHHHHhHHHHHHHHhhhhhcccCCCeEEEEecCCcc--cHHHHHHHHHHhhcCeEEEEcCCC
Confidence 99999999999999999999999999999976 5899999999986 688999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcc
Q psy15698 344 DGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGE 411 (577)
Q Consensus 344 ~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A 411 (577)
+..+.| ..+|+.+.++|+|||.+..+.+|.|||+|+| +||.|||.+|.| ||||||
T Consensus 354 e~eDAC-~~SPass~~aITVGAst~~D~iA~FSN~G~C------------VdiFAPGv~IlSs~iGs~~at~ilSGTSMa 420 (501)
T KOG1153|consen 354 EHEDAC-NSSPASSKKAITVGASTKNDTIAFFSNWGKC------------VDIFAPGVNILSSWIGSNNATAILSGTSMA 420 (501)
T ss_pred cchhhh-ccCcccccccEEecccccccchhhhcCccce------------eeeecCchhhhhhhhcCccchheeeccccc
Confidence 988754 4699999999999999999999999999999 999999999975 799999
Q ss_pred cccCCccccccccccCCC-------cccHHHHHHHH
Q psy15698 412 CQYMWPYCTQPLYHGAIP-------IIVNVTILNGM 440 (577)
Q Consensus 412 ~P~VaG~a~~aL~~~~~P-------~l~~~~i~~~l 440 (577)
+|||+|.++.-|.+.-.| ..++.+++..+
T Consensus 421 sPhvaG~aAy~ls~~~~~~~~f~n~~~s~~~lk~~~ 456 (501)
T KOG1153|consen 421 SPHVAGLAAYFLSLGPLPDSSFANDAGSPSELKKRL 456 (501)
T ss_pred CcchhhhHHHhhhcCCCChHHhhhccCChHHhhhhh
Confidence 999999554444444433 23556664443
No 10
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins. Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.
Probab=100.00 E-value=1.1e-41 Score=346.87 Aligned_cols=223 Identities=28% Similarity=0.367 Sum_probs=191.1
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCCC---------CccCC----CCCCCCCCCCchhhhHhhhcc---CCCccccCCCCcE
Q psy15698 214 GSGVKVAVFDTGLSSGHTGFNNVAE---------RTDWT----NENTLEDKLGHGTFVAGLIAS---SQRCLGFAPDAEL 277 (577)
Q Consensus 214 G~gV~VaViDtGid~~Hpdl~~~~~---------~~~~~----~~~~~~D~~gHGT~VAGiIag---~~~~~GvAP~A~l 277 (577)
|+||+|||||+||+.+||+|.+... ..+|. ....+.|..+|||||||+|+| .....||||+|+|
T Consensus 1 G~GV~VaViDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~HGT~vagii~g~~~~~~~~GvAp~a~i 80 (264)
T cd07481 1 GTGIVVANIDTGVDWTHPALKNKYRGWGGGSADHDYNWFDPVGNTPLPYDDNGHGTHTMGTMVGNDGDGQQIGVAPGARW 80 (264)
T ss_pred CCCcEEEEEeCCCCCCChhHhhcccccCCCCcccccccccCCCCCCCCCCCCCchhhhhhheeecCCCCCceEECCCCeE
Confidence 7999999999999999999985321 11221 112345678999999999998 2345899999999
Q ss_pred eEEEEecCCCCCchHHHHHHHHHHHH------------CCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCC
Q psy15698 278 HIFRVFTNQQVSYTSWFLDAFNYAIL------------KKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDG 345 (577)
Q Consensus 278 ~~~kv~~~~g~~~~~~~~~ai~~a~~------------~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g 345 (577)
+.+|+++..+ ++..+++++++|++. .+++|||||||........+..+++.+.++|++||+||||++
T Consensus 81 ~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~Iin~S~G~~~~~~~~~~~~~~~~~~~gvlvV~aaGN~~ 159 (264)
T cd07481 81 IACRALDRNG-GNDADYLRCAQWMLAPTDSAGNPADPDLAPDVINNSWGGPSGDNEWLQPAVAAWRAAGIFPVFAAGNDG 159 (264)
T ss_pred EEEEeecCCC-CcHHHHHHHHHHHHhcccccccccccccCCeEEEeCCCcCCCCchHHHHHHHHHHHCCCEEEEECCCCC
Confidence 9999998876 778899999999975 689999999998865456788888899999999999999998
Q ss_pred CCCCC-CCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCccccc
Q psy15698 346 PLYGT-LNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQY 414 (577)
Q Consensus 346 ~~~~~-~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~ 414 (577)
.+... ..+|+.++++|+||+++.++.++.||++|+. ..++.||||+|||.+|.+ +|||||||+
T Consensus 160 ~~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~S~~g~~------~~~~~~~dv~ApG~~i~s~~~~~~~~~~~GTS~AaP~ 233 (264)
T cd07481 160 PRCSTLNAPPANYPESFAVGATDRNDVLADFSSRGPS------TYGRIKPDISAPGVNIRSAVPGGGYGSSSGTSMAAPH 233 (264)
T ss_pred CCCCCCcCCCCcCCceEEEEecCCCCCCccccCCCCC------CCCCcCceEEECCCCeEEecCCCceEeeCcHHHHHHH
Confidence 75433 3489999999999999999999999999965 468899999999999874 799999999
Q ss_pred CCccccccccccCCCc--ccHHHHHHHHhhcce
Q psy15698 415 MWPYCTQPLYHGAIPI--IVNVTILNGMGVVGK 445 (577)
Q Consensus 415 VaG~a~~aL~~~~~P~--l~~~~i~~~l~~ta~ 445 (577)
|+| ++||+++++|. ++..|++.+|..||+
T Consensus 234 vaG--~aAll~~~~p~~~l~~~~v~~~L~~tA~ 264 (264)
T cd07481 234 VAG--VAALLWSANPSLIGDVDATEAILTETAR 264 (264)
T ss_pred HHH--HHHHHHHhCCCCCCCHHHHHHHHHHhcC
Confidence 999 77999999999 999999999999984
No 11
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.7e-41 Score=343.98 Aligned_cols=224 Identities=32% Similarity=0.478 Sum_probs=198.2
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCC-CCCccCCC----CCCCCCCCCchhhhHhhhccC-----CCccccCCCCcEeEEEEe
Q psy15698 214 GSGVKVAVFDTGLSSGHTGFNNV-AERTDWTN----ENTLEDKLGHGTFVAGLIASS-----QRCLGFAPDAELHIFRVF 283 (577)
Q Consensus 214 G~gV~VaViDtGid~~Hpdl~~~-~~~~~~~~----~~~~~D~~gHGT~VAGiIag~-----~~~~GvAP~A~l~~~kv~ 283 (577)
|+||+|+|||+||+.+||+|.+. .....+.. .....|..+|||||||+|++. .+..||||+|+|+.+|++
T Consensus 1 G~gv~VaviDsGv~~~h~~l~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiiag~~~~~~~~~~Giap~a~i~~~~v~ 80 (264)
T cd07487 1 GKGITVAVLDTGIDAPHPDFDGRIIRFADFVNTVNGRTTPYDDNGHGTHVAGIIAGSGRASNGKYKGVAPGANLVGVKVL 80 (264)
T ss_pred CCCcEEEEEeCCCCCCCccccccccccccccccccCCCCCCCCCCchHHHHHHHhcCCcccCCceEEECCCCeEEEEEee
Confidence 79999999999999999999843 23333332 345667789999999999983 347999999999999999
Q ss_pred cCCCCCchHHHHHHHHHHHHC----CCcEEEeCCCCCCC---CCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCC
Q psy15698 284 TNQQVSYTSWFLDAFNYAILK----KMDVLNLSIGGPDF---MDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPAD 356 (577)
Q Consensus 284 ~~~g~~~~~~~~~ai~~a~~~----g~~ViN~S~G~~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~ 356 (577)
+..+.+..+.++++++|++++ +++|||||||.... ....+.+++.++.++|++||+||||++.....+.+|+.
T Consensus 81 ~~~~~~~~~~~~~ai~~~~~~~~~~~~~Iin~S~g~~~~~~~~~~~~~~~~~~~~~~gilvv~aaGN~~~~~~~~~~p~~ 160 (264)
T cd07487 81 DDSGSGSESDIIAGIDWVVENNEKYNIRVVNLSLGAPPDPSYGEDPLCQAVERLWDAGIVVVVAAGNSGPGPGTITSPGN 160 (264)
T ss_pred cCCCCccHHHHHHHHHHHHhhccccCceEEEeccCCCCCCCCCCCHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCCccc
Confidence 998888889999999999998 99999999998753 45788999999999999999999999987666789999
Q ss_pred CCCeEEEeeecCCCC----ccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------------------CcCCcccc
Q psy15698 357 QMDVIGVGGINFEDQ----IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------------------PSTNGECQ 413 (577)
Q Consensus 357 ~~~vI~VGA~~~~~~----~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------------------sGTS~A~P 413 (577)
.+++|+|||++.++. ++.||++|++ .+++.||||+|||++|.+ +|||+|||
T Consensus 161 ~~~vi~Vga~~~~~~~~~~~~~~s~~G~~------~~~~~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~~~GTS~Aap 234 (264)
T cd07487 161 SPKVITVGAVDDNGPHDDGISYFSSRGPT------GDGRIKPDVVAPGENIVSCRSPGGNPGAGVGSGYFEMSGTSMATP 234 (264)
T ss_pred CCCceEEEeccCCCCCCccccccccCCCC------CCCCcCCCEEccccceEeccccccccCCCCCCceEeccccchHHH
Confidence 999999999999988 7999999954 588999999999999876 69999999
Q ss_pred cCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 414 YMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 414 ~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
+|+| ++||+++.+|.+++.+|+++|..||+
T Consensus 235 ~vaG--~~All~~~~p~~~~~~ik~~L~~tA~ 264 (264)
T cd07487 235 HVSG--AIALLLQANPILTPDEVKCILRDTAT 264 (264)
T ss_pred HHHH--HHHHHHHHCcCCCHHHHHHHHHhhcC
Confidence 9999 77999999999999999999998874
No 12
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.1e-41 Score=346.06 Aligned_cols=222 Identities=23% Similarity=0.321 Sum_probs=190.9
Q ss_pred CcEEEEEcCCCCCCCCCCC--------CCCCCccCCCCCCC--CCCCCchhhhHhhhccC--CCccccCCCCcEeEEEEe
Q psy15698 216 GVKVAVFDTGLSSGHTGFN--------NVAERTDWTNENTL--EDKLGHGTFVAGLIASS--QRCLGFAPDAELHIFRVF 283 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~--------~~~~~~~~~~~~~~--~D~~gHGT~VAGiIag~--~~~~GvAP~A~l~~~kv~ 283 (577)
||+||||||||+.+||+|. ++...++|.++... .|.++|||||||+|++. ..+.||||+|+|+.+|+.
T Consensus 1 Gv~VaviDsGi~~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~HGT~vagiia~~~~~~~~GvAp~a~l~~~~~~ 80 (261)
T cd07493 1 GITIAVIDAGFPKVHEAFAFKHLFKNLRILGEYDFVDNSNNTNYTDDDHGTAVLSTMAGYTPGVMVGTAPNASYYLARTE 80 (261)
T ss_pred CCEEEEEccCCCccCcchhhhccccCCceeeeecCccCCCCCCCCCCCchhhhheeeeeCCCCCEEEeCCCCEEEEEEec
Confidence 7999999999999999992 45667777765432 57789999999999993 457999999999999986
Q ss_pred cCCC--CCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCC--------------HHHHHHHHHHHcCCcEEEEecCCCCCC
Q psy15698 284 TNQQ--VSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMD--------------FPFVDKVWELTANRVILISAIGNDGPL 347 (577)
Q Consensus 284 ~~~g--~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~--------------~~~~~ai~~a~~~gilvV~AAGN~g~~ 347 (577)
.... ......++.+++|+.+++++|||||||...... ..+.++++++.++|++||+||||+|..
T Consensus 81 ~~~~~~~~~~~~~~~ai~~a~~~~v~VIn~S~G~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~gilvv~AAGN~g~~ 160 (261)
T cd07493 81 DVASETPVEEDNWVAAAEWADSLGVDIISSSLGYTTFDNPTYSYTYADMDGKTSFISRAANIAASKGMLVVNSAGNEGST 160 (261)
T ss_pred ccCCcccccHHHHHHHHHHHHHcCCCEEEeCCCcCCCCCcccccccccccccchHHHHHHHHHHhCCeEEEEECCCCCCC
Confidence 6433 234557889999999999999999999865322 347788889999999999999999974
Q ss_pred C-CCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCC
Q psy15698 348 Y-GTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMW 416 (577)
Q Consensus 348 ~-~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~Va 416 (577)
. ..+.+|+..+++|+|||++.++.++.||++|+. .+++.|||++|||.++++ +|||||||+|+
T Consensus 161 ~~~~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~G~~------~~~~~~pdi~a~G~~~~~~~~~~~~~~~sGTS~AaP~va 234 (261)
T cd07493 161 QWKGIGAPADAENVLSVGAVDANGNKASFSSIGPT------ADGRLKPDVMALGTGIYVINGDGNITYANGTSFSCPLIA 234 (261)
T ss_pred CCCcccCcccCCceEEEEEeccCCCCCccCCcCCC------CCCCcCCceEecCCCeEEEcCCCcEEeeCcHHHHHHHHH
Confidence 2 357899999999999999999999999999954 478999999999998863 79999999999
Q ss_pred ccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 417 PYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 417 G~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
| ++||+++++|.|++.+|+++|..||+
T Consensus 235 G--~aAll~~~~p~lt~~~i~~~l~~tA~ 261 (261)
T cd07493 235 G--LIACLWQAHPNWTNLQIKEAILKSAS 261 (261)
T ss_pred H--HHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence 9 77999999999999999999999874
No 13
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti
Probab=100.00 E-value=1.5e-41 Score=343.79 Aligned_cols=220 Identities=24% Similarity=0.282 Sum_probs=199.5
Q ss_pred HHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEEecC
Q psy15698 207 LWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTN 285 (577)
Q Consensus 207 ~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv~~~ 285 (577)
+|..+++|+||+|||||+||+.+||+|.+ +...+++.......|..+|||||||+|++.. .||||+|+|+.+|+++.
T Consensus 17 ~~~~~~~G~gv~VaViDsGi~~~h~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~--~GvAp~a~i~~~~i~~~ 94 (255)
T cd04077 17 YYYDSSTGSGVDVYVLDTGIRTTHVEFGGRAIWGADFVGGDPDSDCNGHGTHVAGTVGGKT--YGVAKKANLVAVKVLDC 94 (255)
T ss_pred eEecCCCCCCcEEEEEcCCCCCCChhhhCCeeeeeecCCCCCCCCCCccHHHHHHHHHccc--cCcCCCCeEEEEEEeCC
Confidence 77788999999999999999999999984 4556666666557788899999999999854 79999999999999998
Q ss_pred CCCCchHHHHHHHHHHHHC-----CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCe
Q psy15698 286 QQVSYTSWFLDAFNYAILK-----KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDV 360 (577)
Q Consensus 286 ~g~~~~~~~~~ai~~a~~~-----g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~v 360 (577)
.+....+.++++++|++++ +++|||+|||... ...+.+++.++.++|++||+||||+|.+.. ..+|+..+++
T Consensus 95 ~~~~~~~~~~~ai~~~~~~~~~~~~~~iin~S~g~~~--~~~~~~~~~~~~~~g~liV~aaGN~g~~~~-~~~pa~~~~v 171 (255)
T cd04077 95 NGSGTLSGIIAGLEWVANDATKRGKPAVANMSLGGGA--STALDAAVAAAVNAGVVVVVAAGNSNQDAC-NYSPASAPEA 171 (255)
T ss_pred CCCcCHHHHHHHHHHHHhcccccCCCeEEEeCCCCCC--CHHHHHHHHHHHHCCCEEEEeCCCCCCCCC-CcCccCCCce
Confidence 8888889999999999987 4899999999886 678999999999999999999999997543 6789999999
Q ss_pred EEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcccccCCccccccccccCC
Q psy15698 361 IGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYHGAI 428 (577)
Q Consensus 361 I~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~~~~ 428 (577)
|+||+++.++.++.||++|++ +|++|||.+|.+ +|||||||+|+| ++||+++.+
T Consensus 172 i~Vga~~~~~~~~~~S~~g~~------------~~i~apG~~i~~~~~~~~~~~~~~~GTS~Aap~vaG--~~All~~~~ 237 (255)
T cd04077 172 ITVGATDSDDARASFSNYGSC------------VDIFAPGVDILSAWIGSDTATATLSGTSMAAPHVAG--LAAYLLSLG 237 (255)
T ss_pred EEEeccCCCCCccCcccCCCC------------CcEEeCCCCeEecccCCCCcEEeeCcHHHHHHHHHH--HHHHHHhhC
Confidence 999999999999999999987 899999998863 699999999999 779999999
Q ss_pred CcccHHHHHHHHhhcce
Q psy15698 429 PIIVNVTILNGMGVVGK 445 (577)
Q Consensus 429 P~l~~~~i~~~l~~ta~ 445 (577)
|.+++.+|+++|..||+
T Consensus 238 p~~~~~~v~~~L~~tA~ 254 (255)
T cd04077 238 PDLSPAEVKARLLNLAT 254 (255)
T ss_pred CCCCHHHHHHHHHhhcc
Confidence 99999999999999986
No 14
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins. Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat
Probab=100.00 E-value=4.5e-41 Score=347.15 Aligned_cols=217 Identities=23% Similarity=0.265 Sum_probs=179.1
Q ss_pred CCcEEEEEcCCCCCCCCCCCCC-----------------------CCCccCCCC------------------------CC
Q psy15698 215 SGVKVAVFDTGLSSGHTGFNNV-----------------------AERTDWTNE------------------------NT 247 (577)
Q Consensus 215 ~gV~VaViDtGid~~Hpdl~~~-----------------------~~~~~~~~~------------------------~~ 247 (577)
++|+|||||||||++||||+.. +.+++|... ..
T Consensus 1 ~~V~VaviDtGid~~Hpdl~~~~~~n~~e~~~~~~d~d~ng~~dd~~g~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (291)
T cd07483 1 KTVIVAVLDSGVDIDHEDLKGKLWINKKEIPGNGIDDDNNGYIDDVNGWNFLGQYDPRRIVGDDPYDLTEKGYGNNDVNG 80 (291)
T ss_pred CceEEEEEeCCCCCCChhhhhhhhcCCcccCCCCccCCCCCccccccCeeccCCcccccccccCccccccccccccccCC
Confidence 5899999999999999999842 234555421 01
Q ss_pred CCCCCCchhhhHhhhcc----CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCC-CCHH
Q psy15698 248 LEDKLGHGTFVAGLIAS----SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDF-MDFP 322 (577)
Q Consensus 248 ~~D~~gHGT~VAGiIag----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~-~~~~ 322 (577)
+.+..+|||||||||++ +.++.||||+|+|+.+|++.. +....+.+++||+||+++|++|||||||.... ....
T Consensus 81 ~~~~~gHGT~VAGiIaa~~~n~~g~~GvAp~a~i~~~k~~~~-g~~~~~~i~~Ai~~a~~~g~~IiN~S~G~~~~~~~~~ 159 (291)
T cd07483 81 PISDADHGTHVAGIIAAVRDNGIGIDGVADNVKIMPLRIVPN-GDERDKDIANAIRYAVDNGAKVINMSFGKSFSPNKEW 159 (291)
T ss_pred CCCCCCcHHHHHHHHhCcCCCCCceEEECCCCEEEEEEEecC-CCcCHHHHHHHHHHHHHCCCcEEEeCCCCCCCCccHH
Confidence 22467999999999998 346889999999999999864 45567889999999999999999999997532 2456
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCCC-CCCCCC--------CCCCeEEEeeecCCCC---ccCCCCCCCCCCcCCCCCC
Q psy15698 323 FVDKVWELTANRVILISAIGNDGPLYG-TLNNPA--------DQMDVIGVGGINFEDQ---IAKFSSRGMTAWELPGGYG 390 (577)
Q Consensus 323 ~~~ai~~a~~~gilvV~AAGN~g~~~~-~~~~Pa--------~~~~vI~VGA~~~~~~---~a~fS~~G~~~~~~p~~~g 390 (577)
+.+++++|.++|+++|+||||+|.+.. ...+|+ ..+++|+||+++..+. ++.||++|+.
T Consensus 160 ~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~p~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~~Sn~G~~--------- 230 (291)
T cd07483 160 VDDAIKYAESKGVLIVHAAGNDGLDLDITPNFPNDYDKNGGEPANNFITVGASSKKYENNLVANFSNYGKK--------- 230 (291)
T ss_pred HHHHHHHHHhCCeEEEEeCCCCCCCCCcCcCCCCcccccCccccCCeeEEeeccccCCcccccccCCCCCC---------
Confidence 788999999999999999999986422 223444 4589999999997654 7899999964
Q ss_pred CccccEEecCCceec----------CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 391 RVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 391 ~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
++||+|||.+|.+ +|||||||+|+| ++||+++++|.|++.||+++|..||.
T Consensus 231 --~vdi~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAl~~s~~p~lt~~~v~~~L~~ta~ 291 (291)
T cd07483 231 --NVDVFAPGERIYSTTPDNEYETDSGTSMAAPVVSG--VAALIWSYYPNLTAKEVKQIILESGV 291 (291)
T ss_pred --ceEEEeCCCCeEeccCcCCeEeeccHHHHHHHHHH--HHHHHHHHCCCCCHHHHHHHHHHhCC
Confidence 4999999999975 699999999999 77999999999999999999999874
No 15
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5. gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.5e-40 Score=346.32 Aligned_cols=235 Identities=30% Similarity=0.400 Sum_probs=202.2
Q ss_pred CchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-------CCCCccCCC-----------CCCCCCCCCchhhhHhhhcc
Q psy15698 203 QANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-------VAERTDWTN-----------ENTLEDKLGHGTFVAGLIAS 264 (577)
Q Consensus 203 ~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-------~~~~~~~~~-----------~~~~~D~~gHGT~VAGiIag 264 (577)
+++++|+.+++|+||+|||||+||+.+||+|.+ +..++++.. ...+.|..+|||||||+|++
T Consensus 1 ~v~~~~~~g~tG~gv~VaViDsGid~~hp~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~ 80 (312)
T cd07489 1 GVDKLHAEGITGKGVKVAVVDTGIDYTHPALGGCFGPGCKVAGGYDFVGDDYDGTNPPVPDDDPMDCQGHGTHVAGIIAA 80 (312)
T ss_pred ChhhHHhCCCCCCCCEEEEEECCCCCCChhhhcCCCCCceeccccccCCcccccccCCCCCCCCCCCCCcHHHHHHHHhc
Confidence 468899999999999999999999999999974 223344432 22455678999999999999
Q ss_pred C---CCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCC-CCCHHHHHHHHHHHcCCcEEEEe
Q psy15698 265 S---QRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPD-FMDFPFVDKVWELTANRVILISA 340 (577)
Q Consensus 265 ~---~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~-~~~~~~~~ai~~a~~~gilvV~A 340 (577)
. .++.||||+|+|+.+|+++..+......++++++++++++++|||||||.+. .....+.+++.++.++|+++|+|
T Consensus 81 ~~~~~~~~GiAp~a~i~~~~v~~~~~~~~~~~~~~ai~~a~~~~~~iIn~S~g~~~~~~~~~~~~~~~~~~~~gv~iv~a 160 (312)
T cd07489 81 NPNAYGFTGVAPEATLGAYRVFGCSGSTTEDTIIAAFLRAYEDGADVITASLGGPSGWSEDPWAVVASRIVDAGVVVTIA 160 (312)
T ss_pred CCCCCceEEECCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhcCCCEEEeCCCcCCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 3 4688999999999999999878788889999999999999999999999864 33567888889999999999999
Q ss_pred cCCCCCCC-CCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------Cc
Q psy15698 341 IGNDGPLY-GTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PS 407 (577)
Q Consensus 341 AGN~g~~~-~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sG 407 (577)
|||+|... ....+|+..+++|+||+++ +.||++|++ ...+.|||++|||.++.+ +|
T Consensus 161 aGN~g~~~~~~~~~p~~~~~vi~Vga~~-----~~~s~~g~~------~~~~~kpdv~ApG~~i~~~~~~~~~~~~~~~G 229 (312)
T cd07489 161 AGNDGERGPFYASSPASGRGVIAVASVD-----SYFSSWGPT------NELYLKPDVAAPGGNILSTYPLAGGGYAVLSG 229 (312)
T ss_pred CCCCCCCCCCcccCCccCCCeEEEEEec-----CCccCCCCC------CCCCcCccEEcCCCCEEEeeeCCCCceEeecc
Confidence 99998742 2346799999999999998 889999955 467889999999998853 79
Q ss_pred CCcccccCCccccccccccCC-CcccHHHHHHHHhhcceecCCC
Q psy15698 408 TNGECQYMWPYCTQPLYHGAI-PIIVNVTILNGMGVVGKILERP 450 (577)
Q Consensus 408 TS~A~P~VaG~a~~aL~~~~~-P~l~~~~i~~~l~~ta~~~~~~ 450 (577)
||+|||+|+| ++||+++.+ |.+++.+|+++|..||..+...
T Consensus 230 TS~Aap~vaG--~~Al~~~~~~~~~~~~~v~~~l~~ta~~~~~~ 271 (312)
T cd07489 230 TSMATPYVAG--AAALLIQARHGKLSPAELRDLLASTAKPLPWS 271 (312)
T ss_pred HHHHHHHHHH--HHHHHHHhcCCCCCHHHHHHHHHHhCcccccc
Confidence 9999999999 779999999 9999999999999999887643
No 16
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin. Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev
Probab=100.00 E-value=1.5e-40 Score=339.96 Aligned_cols=222 Identities=25% Similarity=0.289 Sum_probs=188.9
Q ss_pred HHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC--CCCccC-CC-----------CCCCCCCCCchhhhHhhhcc---CCCc
Q psy15698 206 TLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV--AERTDW-TN-----------ENTLEDKLGHGTFVAGLIAS---SQRC 268 (577)
Q Consensus 206 ~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~--~~~~~~-~~-----------~~~~~D~~gHGT~VAGiIag---~~~~ 268 (577)
++|+.+++|+||+|+||||||+.+||+|.+. ..++.. .+ .....|..+|||||||+|++ +...
T Consensus 1 ~aw~~g~~G~gv~IaviDtGid~~Hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gHGT~VAgiia~~~~~~~~ 80 (273)
T cd07485 1 AAWEFGTGGPGIIVAVVDTGVDGTHPDLQGNGDGDGYDPAVNGYNFVPNVGDIDNDVSVGGGHGTHVAGTIAAVNNNGGG 80 (273)
T ss_pred CccccccCCCCcEEEEEeCCCCCCChhhccCCCCCCcccccCCcccccccCCcCCCCCCCCCCHHHHHHHHHcccCCCcc
Confidence 3799999999999999999999999999954 111111 11 22345678999999999998 2223
Q ss_pred c-------ccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCC--CCCHHHHHHHHHHHcC------
Q psy15698 269 L-------GFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPD--FMDFPFVDKVWELTAN------ 333 (577)
Q Consensus 269 ~-------GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~--~~~~~~~~ai~~a~~~------ 333 (577)
. |+||+|+|+.+|+++..+......++++|+|+++++++|||||||... .....+.+++.++.++
T Consensus 81 ~g~i~~~~gvap~a~l~~~~v~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~g~~~~~~~~~~~~~a~~~~~~~~~~~~~ 160 (273)
T cd07485 81 VGGIAGAGGVAPGVKIMSIQIFAGRYYVGDDAVAAAIVYAADNGAVILQNSWGGTGGGIYSPLLKDAFDYFIENAGGSPL 160 (273)
T ss_pred eeccccccccCCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCcEEEecCCCCCccccCHHHHHHHHHHHHhcccccC
Confidence 3 499999999999999887778889999999999999999999999875 2356788888888888
Q ss_pred -CcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCC-cee-------
Q psy15698 334 -RVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGS-AVR------- 404 (577)
Q Consensus 334 -gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~-~I~------- 404 (577)
|+++|+||||++.... .+|+..+++|+||+++..+.++.||++|+. +||+|||. .+.
T Consensus 161 ~g~lvv~AaGN~g~~~~--~~pa~~~~vi~V~a~~~~~~~~~~S~~g~~------------~~i~apG~~~i~~~~~~~~ 226 (273)
T cd07485 161 DGGIVVFSAGNSYTDEH--RFPAAYPGVIAVAALDTNDNKASFSNYGRW------------VDIAAPGVGTILSTVPKLD 226 (273)
T ss_pred CCeEEEEecCCCCCCCC--CCcccCCCeEEEEeccCCCCcCccccCCCc------------eEEEeCCCCcccccccccc
Confidence 9999999999997533 349999999999999999999999999976 79999999 543
Q ss_pred ---------cCcCCcccccCCccccccccccCCCc-ccHHHHHHHHhhc
Q psy15698 405 ---------GPSTNGECQYMWPYCTQPLYHGAIPI-IVNVTILNGMGVV 443 (577)
Q Consensus 405 ---------ssGTS~A~P~VaG~a~~aL~~~~~P~-l~~~~i~~~l~~t 443 (577)
.+|||||||+|+| ++||+++.+|. +++.||+++|..|
T Consensus 227 ~~~~~~~~~~sGTS~AaP~VaG--~aAll~~~~~~~~~~~~i~~~L~~T 273 (273)
T cd07485 227 GDGGGNYEYLSGTSMAAPHVSG--VAALVLSKFPDVFTPEQIRKLLEES 273 (273)
T ss_pred CCCCCCeEeeccHHHHHHHHHH--HHHHHHHhCCCCCCHHHHHHHHHhC
Confidence 3699999999999 77999999999 9999999999865
No 17
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.1e-40 Score=341.71 Aligned_cols=232 Identities=22% Similarity=0.221 Sum_probs=185.1
Q ss_pred hhhhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC-CCCccCC---CCCCCCCCCCchhhhHhhhccCCCccccC
Q psy15698 197 QITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV-AERTDWT---NENTLEDKLGHGTFVAGLIASSQRCLGFA 272 (577)
Q Consensus 197 ~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~-~~~~~~~---~~~~~~D~~gHGT~VAGiIag~~~~~GvA 272 (577)
.+.+.++++.+|++|++|+||+||||||||+..|| |... .....+. ..+...|..|||||||++| .|||
T Consensus 3 ~~~~~l~~~~~~~~G~~G~Gv~VaViDTGv~~~h~-~~~~~~~~~~~~~~~~~~~~~D~~gHGT~vag~i------~GvA 75 (298)
T cd07494 3 DLAALLNATRVHQRGITGRGVRVAMVDTGFYAHPF-FESRGYQVRVVLAPGATDPACDENGHGTGESANL------FAIA 75 (298)
T ss_pred hHhhhcChhHHHhcCCCCCCcEEEEEeCCCcCCch-hhcCCccceeecCCCCCCCCCCCCCcchheeece------eEeC
Confidence 45678999999999999999999999999999888 5532 1111111 1234567889999999987 7899
Q ss_pred CCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCC------------CHHHHHHHHHHHcCCcEEEEe
Q psy15698 273 PDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFM------------DFPFVDKVWELTANRVILISA 340 (577)
Q Consensus 273 P~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~------------~~~~~~ai~~a~~~gilvV~A 340 (577)
|+|+|+.+|+++. ..+.++++|+||++++++|||||||..... ...+.+++.+|.++|+++|+|
T Consensus 76 P~a~i~~vkv~~~----~~~~~~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~~~al~~ai~~A~~~Gi~vVaA 151 (298)
T cd07494 76 PGAQFIGVKLGGP----DLVNSVGAFKKAISLSPDIISNSWGYDLRSPGTSWSRSLPNALKALAATLQDAVARGIVVVFS 151 (298)
T ss_pred CCCeEEEEEccCC----CcHHHHHHHHHHHhcCCCEEEeecccCCCCcccccccccchhhHHHHHHHHHHHHCCcEEEEe
Confidence 9999999999876 346788999999999999999999975321 235788899999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCeEEEeeec--CCCCc-cCCCCCCCCCCcCCCCCCCccccEE----------------ecCC
Q psy15698 341 IGNDGPLYGTLNNPADQMDVIGVGGIN--FEDQI-AKFSSRGMTAWELPGGYGRVKPDIV----------------TYGS 401 (577)
Q Consensus 341 AGN~g~~~~~~~~Pa~~~~vI~VGA~~--~~~~~-a~fS~~G~~~~~~p~~~g~~kpDi~----------------ApG~ 401 (577)
|||++. .+|+..++||+|||++ .++.. ..+++.|... +...|+.|||++ |||.
T Consensus 152 AGN~~~-----~~Pa~~p~viaVga~~~~~~g~~~~~~~~~~~~s---~~~~g~~~pd~~~~~g~~~~~~~~~~~~APG~ 223 (298)
T cd07494 152 AGNGGW-----SFPAQHPEVIAAGGVFVDEDGARRASSYASGFRS---KIYPGRQVPDVCGLVGMLPHAAYLMLPVPPGS 223 (298)
T ss_pred CCCCCC-----CcCCCCCCEEEEEeEeccCCCcccccccccCccc---ccCCCCccCccccccCcCCcccccccccCCCc
Confidence 999874 5799999999999994 34433 2232222111 223577888874 6998
Q ss_pred cee------------------cCcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCC
Q psy15698 402 AVR------------------GPSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILER 449 (577)
Q Consensus 402 ~I~------------------ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~ 449 (577)
.|. .+|||||||||+| ++||+++.+|.+++.+|++.|..||+++..
T Consensus 224 ~i~~~~~~~~~~~~~~~~y~~~sGTS~Aap~vaG--~aAll~~~~p~~~~~~v~~~l~~ta~~~~~ 287 (298)
T cd07494 224 QLDRSCAAFPDGTPPNDGWGVFSGTSAAAPQVAG--VCALMLQANPGLSPERARSLLNKTARDVTK 287 (298)
T ss_pred ceeccccCCCCCCCCCCCeEeeccchHHHHHHHH--HHHHHHHhCCCCCHHHHHHHHHHhCcccCC
Confidence 773 2699999999999 779999999999999999999999998874
No 18
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=5.3e-40 Score=331.74 Aligned_cols=225 Identities=26% Similarity=0.389 Sum_probs=190.9
Q ss_pred CcEEEEEcCCCCCCCCCCCCCC-CCccCC-----CCCCCCCCCCchhhhHhhhccC---CCccccCCCCcEeEEEEecCC
Q psy15698 216 GVKVAVFDTGLSSGHTGFNNVA-ERTDWT-----NENTLEDKLGHGTFVAGLIASS---QRCLGFAPDAELHIFRVFTNQ 286 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~~~~-~~~~~~-----~~~~~~D~~gHGT~VAGiIag~---~~~~GvAP~A~l~~~kv~~~~ 286 (577)
||+|||||+||+.+||+|.+.. ...+|+ ......|..+|||||||+|++. ....||||+|+|+.+|+++..
T Consensus 1 GV~VaviDsGv~~~hp~l~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~vAgiia~~~~~~~~~GvAp~a~i~~~~v~~~~ 80 (254)
T cd07490 1 GVTVAVLDTGVDADHPDLAGRVAQWADFDENRRISATEVFDAGGHGTHVSGTIGGGGAKGVYIGVAPEADLLHGKVLDDG 80 (254)
T ss_pred CCEEEEEeCCCCCCCcchhcccCCceeccCCCCCCCCCCCCCCCcHHHHHHHHhcCCCCCCEEEECCCCEEEEEEEecCC
Confidence 7999999999999999998543 334443 2334667789999999999993 457899999999999999887
Q ss_pred CCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHc-CCcEEEEecCCCCCCCCCCCCCCCCCCeEEEee
Q psy15698 287 QVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTA-NRVILISAIGNDGPLYGTLNNPADQMDVIGVGG 365 (577)
Q Consensus 287 g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~-~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA 365 (577)
+ ...+.++++|+|+++++++|||||||........+.++++++.+ +|+++|+||||+|.. +..+|+..+++|+||+
T Consensus 81 ~-~~~~~~~~ai~~a~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~g~lvV~aAGN~g~~--~~~~pa~~~~vi~Vga 157 (254)
T cd07490 81 G-GSLSQIIAGMEWAVEKDADVVSMSLGGTYYSEDPLEEAVEALSNQTGALFVVSAGNEGHG--TSGSPGSAYAALSVGA 157 (254)
T ss_pred C-CcHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcHHHHHHHHHHHcCCCEEEEeCCCCCCC--CCCCCccCCceeEEec
Confidence 6 67889999999999999999999999876545566677766654 699999999999974 6789999999999999
Q ss_pred ecCCCCccCCCCCCCCCCcC-----CCCCCCccccEEecCCceec--------------CcCCcccccCCcccccccccc
Q psy15698 366 INFEDQIAKFSSRGMTAWEL-----PGGYGRVKPDIVTYGSAVRG--------------PSTNGECQYMWPYCTQPLYHG 426 (577)
Q Consensus 366 ~~~~~~~a~fS~~G~~~~~~-----p~~~g~~kpDi~ApG~~I~s--------------sGTS~A~P~VaG~a~~aL~~~ 426 (577)
++..++++.||++|...|.. +......|||+++||.++.+ +|||||||+|+| ++||+++
T Consensus 158 ~~~~~~~~~~s~~g~~~~~~~~~~~~~~~~~~~~d~~apG~~i~~~~~~~~~~~~~~~~~GTS~AaP~vaG--~aAl~~~ 235 (254)
T cd07490 158 VDRDDEDAWFSSFGSSGASLVSAPDSPPDEYTKPDVAAPGVDVYSARQGANGDGQYTRLSGTSMAAPHVAG--VAALLAA 235 (254)
T ss_pred ccccCCccCccCCcccccccccCCCCCccCCcCceEEeccCCeEccccCCCCCCCeeecccHHHHHHHHHH--HHHHHHH
Confidence 99999999999999544331 12244589999999999986 699999999999 7799999
Q ss_pred CCCcccHHHHHHHHhhcce
Q psy15698 427 AIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 427 ~~P~l~~~~i~~~l~~ta~ 445 (577)
++|.+++.+|+.+|..||+
T Consensus 236 ~~p~~~~~~i~~~L~~tA~ 254 (254)
T cd07490 236 AHPDLSPEQIKDALTETAY 254 (254)
T ss_pred HCCCCCHHHHHHHHHHhcC
Confidence 9999999999999999874
No 19
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=4.1e-40 Score=338.86 Aligned_cols=212 Identities=26% Similarity=0.324 Sum_probs=183.6
Q ss_pred CcEEEEEcCCCCCCCCCCCCCC-CCccCCCCC---------------------------------CCCCCCCchhhhHhh
Q psy15698 216 GVKVAVFDTGLSSGHTGFNNVA-ERTDWTNEN---------------------------------TLEDKLGHGTFVAGL 261 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~~~~-~~~~~~~~~---------------------------------~~~D~~gHGT~VAGi 261 (577)
||+||||||||+.+||+|.... .+++|..+. ...+..+||||||||
T Consensus 1 gV~VaviDtGi~~~Hp~l~~~~~~g~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~HGT~vAgi 80 (285)
T cd07496 1 GVVVAVLDTGVLFHHPDLAGVLLPGYDFISDPAIANDGDGRDSDPTDPGDWVTGDDVPPGGFCGSGVSPSSWHGTHVAGT 80 (285)
T ss_pred CCEEEEecCCCCCCCcchhhccccCcccccCcccccCCCCCCCCCCCcccccccccccccccccCCCCCCCCCHHHHHHH
Confidence 7999999999999999999543 556654221 122346799999999
Q ss_pred hcc----CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHH----------HCCCcEEEeCCCCCCCCCHHHHHHH
Q psy15698 262 IAS----SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI----------LKKMDVLNLSIGGPDFMDFPFVDKV 327 (577)
Q Consensus 262 Iag----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~----------~~g~~ViN~S~G~~~~~~~~~~~ai 327 (577)
|+| +.++.||||+|+|+.+|+++..+. ..+++++|++|++ .++++|||||||........+.+++
T Consensus 81 iaa~~~~~~~~~GvAp~a~i~~~~v~~~~~~-~~~~i~~a~~~a~~~~~~~~~~~~~~~~Iin~S~G~~~~~~~~~~~ai 159 (285)
T cd07496 81 IAAVTNNGVGVAGVAWGARILPVRVLGKCGG-TLSDIVDGMRWAAGLPVPGVPVNPNPAKVINLSLGGDGACSATMQNAI 159 (285)
T ss_pred HhCcCCCCCCceeecCCCeEEEEEEecCCCC-cHHHHHHHHHHHhccCcCCCcccCCCCeEEEeCCCCCCCCCHHHHHHH
Confidence 998 346889999999999999987765 7889999999998 4578999999998764467899999
Q ss_pred HHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCcee---
Q psy15698 328 WELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR--- 404 (577)
Q Consensus 328 ~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~--- 404 (577)
.++.++|++||+||||++.+. +..+|+..+++|+|||++.++.++.||++|+. +|++|||.+|.
T Consensus 160 ~~a~~~GvivV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~------------vdi~apG~~i~~~~ 226 (285)
T cd07496 160 NDVRARGVLVVVAAGNEGSSA-SVDAPANCRGVIAVGATDLRGQRASYSNYGPA------------VDVSAPGGDCASDV 226 (285)
T ss_pred HHHHHCCCEEEEECCCCCCCC-CccCCCCCCceEEEeccCCCCCcccccCCCCC------------CCEEeCCCCccccC
Confidence 999999999999999999753 56799999999999999999999999999976 78999998764
Q ss_pred ----------------------cCcCCcccccCCccccccccccCCCcccHHHHHHHHhhc
Q psy15698 405 ----------------------GPSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVV 443 (577)
Q Consensus 405 ----------------------ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~t 443 (577)
.+|||||||+|+| ++||+++++|.+++.+|+++|..|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG--~aAlv~~~~p~lt~~~v~~~L~~t 285 (285)
T cd07496 227 NGDGYPDSNTGTTSPGGSTYGFLQGTSMAAPHVAG--VAALMKSVNPSLTPAQIESLLQST 285 (285)
T ss_pred CCCccccccccccCCCCCceEeeCcHHHHHHHHHH--HHHHHHHhCCCCCHHHHHHHHHhC
Confidence 2699999999999 779999999999999999999865
No 20
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug
Probab=100.00 E-value=8.5e-40 Score=324.86 Aligned_cols=213 Identities=28% Similarity=0.446 Sum_probs=190.9
Q ss_pred CcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC--CCCCCCCchhhhHhhhcc---CCCccccCCCCcEeEEEEecCCCCC
Q psy15698 216 GVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN--TLEDKLGHGTFVAGLIAS---SQRCLGFAPDAELHIFRVFTNQQVS 289 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~--~~~D~~gHGT~VAGiIag---~~~~~GvAP~A~l~~~kv~~~~g~~ 289 (577)
||+|||||+||+.+||+|.+ +....++.... ...|..+|||||||+|++ ..++.|+||+|+|+.+|+++..+.+
T Consensus 1 gv~V~iiDsGv~~~h~~l~~~~~~~~~~~~~~~~~~~~~~~HGT~vA~ii~~~~~~~~~~giap~a~i~~~~~~~~~~~~ 80 (229)
T cd07477 1 GVKVAVIDTGIDSSHPDLKLNIVGGANFTGDDNNDYQDGNGHGTHVAGIIAALDNGVGVVGVAPEADLYAVKVLNDDGSG 80 (229)
T ss_pred CCEEEEEcCCCCCCChhHhccccCcccccCCCCCCCCCCCCCHHHHHHHHhcccCCCccEeeCCCCEEEEEEEECCCCCc
Confidence 79999999999999999994 45566666543 567788999999999999 3367899999999999999988888
Q ss_pred chHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCC
Q psy15698 290 YTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFE 369 (577)
Q Consensus 290 ~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~ 369 (577)
....++++++|+++++++|||||||.... ...+.+++.++.++|+++|+||||++.......+|+.++++|+||+++.+
T Consensus 81 ~~~~l~~ai~~a~~~~~~Vin~S~g~~~~-~~~~~~~~~~a~~~giliv~aaGN~~~~~~~~~~pa~~~~vi~Vga~~~~ 159 (229)
T cd07477 81 TYSDIIAGIEWAIENGMDIINMSLGGPSD-SPALREAIKKAYAAGILVVAAAGNSGNGDSSYDYPAKYPSVIAVGAVDSN 159 (229)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCC-CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCccCCCCCCCEEEEEeecCC
Confidence 88999999999999999999999998753 56788899999999999999999999865554589999999999999999
Q ss_pred CCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCCCcccHHHHHHH
Q psy15698 370 DQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNG 439 (577)
Q Consensus 370 ~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~ 439 (577)
+.+..||++|+. +|++|||.+|.+ +|||+|||+|+| ++||+++.+|.+++.+|++.
T Consensus 160 ~~~~~~s~~g~~------------~~~~apg~~i~~~~~~~~~~~~~GTS~Aap~vag--~~All~~~~~~~~~~~i~~~ 225 (229)
T cd07477 160 NNRASFSSTGPE------------VELAAPGVDILSTYPNNDYAYLSGTSMATPHVAG--VAALVWSKRPELTNAQVRQA 225 (229)
T ss_pred CCcCCccCCCCC------------ceEEeCCCCeEEecCCCCEEEEccHHHHHHHHHH--HHHHHHHhCCCCCHHHHHHH
Confidence 999999999976 899999999864 799999999999 77999999999999999999
Q ss_pred Hhhc
Q psy15698 440 MGVV 443 (577)
Q Consensus 440 l~~t 443 (577)
|..|
T Consensus 226 l~~t 229 (229)
T cd07477 226 LNKT 229 (229)
T ss_pred HHhC
Confidence 9865
No 21
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.
Probab=100.00 E-value=1.5e-39 Score=335.97 Aligned_cols=228 Identities=21% Similarity=0.228 Sum_probs=181.2
Q ss_pred ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC---CCccCCCCC---CCC--CCCCchhhhHhhhccC----CCc
Q psy15698 201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVA---ERTDWTNEN---TLE--DKLGHGTFVAGLIASS----QRC 268 (577)
Q Consensus 201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~---~~~~~~~~~---~~~--D~~gHGT~VAGiIag~----~~~ 268 (577)
.++++.+|+.+++|+||+|+|||+||+.+||+|.+.. ..+++.... .+. |..+|||||||+|++. .+.
T Consensus 25 ~~~~~~~w~~g~~G~gv~VaViDtGv~~~h~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gHGT~vAgiiag~~~~~~~~ 104 (297)
T cd04059 25 DLNVTPAWEQGITGKGVTVAVVDDGLEITHPDLKDNYDPEASYDFNDNDPDPTPRYDDDNSHGTRCAGEIAAVGNNGICG 104 (297)
T ss_pred CcccHHHHhCCCCCcceEEEEEeCCcccCCHhHhhcccccccccccCCCCCCCCccccccccCcceeeEEEeecCCCccc
Confidence 5899999999999999999999999999999998543 455555322 122 7789999999999992 257
Q ss_pred cccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCC------CHHHHHHHHHHHc-----CCcEE
Q psy15698 269 LGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFM------DFPFVDKVWELTA-----NRVIL 337 (577)
Q Consensus 269 ~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~------~~~~~~ai~~a~~-----~gilv 337 (577)
.||||+|+|+.+|+++.. ........++.++.+ .++|||||||..... ...+.+++.++.. +|+++
T Consensus 105 ~GvAp~a~l~~~~~~~~~--~~~~~~~~~~~~~~~-~~~Vin~S~g~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~gilv 181 (297)
T cd04059 105 VGVAPGAKLGGIRMLDGD--VTDVVEAESLGLNPD-YIDIYSNSWGPDDDGKTVDGPGPLAQRALENGVTNGRNGKGSIF 181 (297)
T ss_pred ccccccceEeEEEecCCc--cccHHHHHHHhcccC-CceEEECCCCCCCCCCccCCCcHHHHHHHHHHHHhCCCCCceEE
Confidence 899999999999999875 233344555555544 469999999976321 2345555555543 69999
Q ss_pred EEecCCCCCC--CCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCc-------------
Q psy15698 338 ISAIGNDGPL--YGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSA------------- 402 (577)
Q Consensus 338 V~AAGN~g~~--~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~------------- 402 (577)
|+||||+|.. .+....|+..+++|+|||++.++.++.||++|+. .++++||..
T Consensus 182 V~AAGN~g~~~~~~~~~~~~~~~~vi~Vga~~~~g~~~~~s~~g~~------------~~~~a~g~~~~~~~~~i~~~~~ 249 (297)
T cd04059 182 VWAAGNGGNLGDNCNCDGYNNSIYTISVSAVTANGVRASYSEVGSS------------VLASAPSGGSGNPEASIVTTDL 249 (297)
T ss_pred EEeCCCCCCCCCCCCCCcccCCCceEEEEeeCCCCCCcCCCCCCCc------------EEEEecCCCCCCCCCceEeCCC
Confidence 9999999973 3345567888999999999999999999999987 445555543
Q ss_pred -------eecCcCCcccccCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 403 -------VRGPSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 403 -------I~ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
...+|||||+|+|+| ++||+++++|.+++.+|+++|..||+
T Consensus 250 ~~~~~~~~~~sGTS~AaP~VAG--~aAll~~~~p~lt~~~v~~~L~~TA~ 297 (297)
T cd04059 250 GGNCNCTSSHNGTSAAAPLAAG--VIALMLEANPNLTWRDVQHILALTAR 297 (297)
T ss_pred CCCCCcccccCCcchhhhhhHh--HHHHhhccCCCCCHHHHHHHHHHhcC
Confidence 234799999999999 77999999999999999999999984
No 22
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=7.5e-40 Score=330.13 Aligned_cols=193 Identities=17% Similarity=0.184 Sum_probs=166.7
Q ss_pred CCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC--------CCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEEec
Q psy15698 214 GSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN--------TLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFT 284 (577)
Q Consensus 214 G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~--------~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv~~ 284 (577)
+++|+||||||||+.+||+|++ +..+.+|.... ...|..||||||||||+ |+||+|+|+++|+++
T Consensus 2 ~~~V~VaVIDsGvd~~hpdl~~~i~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiI~------gvap~a~i~~~kv~~ 75 (247)
T cd07491 2 LKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGDGNKVSPYYVSADGHGTAMARMIC------RICPSAKLYVIKLED 75 (247)
T ss_pred CCCCEEEEECCCcCCCchhhccccccCCCCCCCCCCcccCCCCCCCCCCcHHHHHHHHH------HHCCCCeEEEEEecc
Confidence 6899999999999999999995 45566666432 23467899999999994 699999999999998
Q ss_pred CCC------CCchHHHHHHHHHHHHCCCcEEEeCCCCCCC-----CCHHHHHHHHHHHcCCcEEEEecCCCCCCCC-CCC
Q psy15698 285 NQQ------VSYTSWFLDAFNYAILKKMDVLNLSIGGPDF-----MDFPFVDKVWELTANRVILISAIGNDGPLYG-TLN 352 (577)
Q Consensus 285 ~~g------~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~-----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~-~~~ 352 (577)
..+ .++...+++||+||+++|++|||||||.... ....+.+++++|.++|+++|+||||+|.+.. .+.
T Consensus 76 ~~~~~~~~~~~~~~~i~~Ai~~Ai~~gadIIn~S~g~~~~~~~~~~~~~l~~ai~~A~~~GilvvaaAGN~g~~~~~~~~ 155 (247)
T cd07491 76 RPSPDSNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDNDNDINELENAIKEALDRGILLFCSASDQGAFTGDTYP 155 (247)
T ss_pred cCCCCCcccccCHHHHHHHHHHHHHCCCcEEEeeeecccccccccchHHHHHHHHHHHhCCeEEEEecCCCCCcCCCccc
Confidence 765 3456789999999999999999999998653 2567899999999999999999999998654 566
Q ss_pred CCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------------CcCCcccccCCccc
Q psy15698 353 NPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------------PSTNGECQYMWPYC 419 (577)
Q Consensus 353 ~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------------sGTS~A~P~VaG~a 419 (577)
+|+..++||+|||++.+++++.||++|+. +|++|||++|.+ +|||||||+|+|
T Consensus 156 ~pa~~~~Vi~VgA~~~~g~~~~~S~~g~~------------vd~~APG~~i~s~~~~~~~~~~~~~sGTS~Atp~vaG-- 221 (247)
T cd07491 156 PPAARDRIFRIGAADEDGGADAPVGDEDR------------VDYILPGENVEARDRPPLSNSFVTHTGSSVATALAAG-- 221 (247)
T ss_pred CcccCCCeEEEEeeCCCCCCccccCCCCc------------ceEEeCCCceecCCcCCCCCCeeeeccHHHHHHHHHH--
Confidence 78999999999999999999999999976 899999999863 699999999999
Q ss_pred ccccccc
Q psy15698 420 TQPLYHG 426 (577)
Q Consensus 420 ~~aL~~~ 426 (577)
++||+++
T Consensus 222 vaAL~l~ 228 (247)
T cd07491 222 LAALILY 228 (247)
T ss_pred HHHHHHH
Confidence 6677764
No 23
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=9.6e-40 Score=334.58 Aligned_cols=222 Identities=20% Similarity=0.230 Sum_probs=175.5
Q ss_pred cCchHHHhcCC-CCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCCCCCCCCCchhhhHhhhcc---CCCccccCCCCcE
Q psy15698 202 LQANTLWDLGI-RGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGLIAS---SQRCLGFAPDAEL 277 (577)
Q Consensus 202 i~~~~~w~~g~-~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~D~~gHGT~VAGiIag---~~~~~GvAP~A~l 277 (577)
|+++++|+... .|++|+|+|||+||+.+||||.+.... ........|.++|||||||||+| +.++.||||+|+|
T Consensus 2 i~~~~aw~~~~g~G~gV~VaviDtGid~~Hpdl~~~~~~--~~~~~~~~d~~gHGT~VAGiIaa~~n~~G~~GvAp~a~l 79 (277)
T cd04843 2 INARYAWTKPGGSGQGVTFVDIEQGWNLNHEDLVGNGIT--LISGLTDQADSDHGTAVLGIIVAKDNGIGVTGIAHGAQA 79 (277)
T ss_pred CChHHHHHhcCCCCCcEEEEEecCCCCCCChhhcccccc--ccCCCCCCCCCCCcchhheeeeeecCCCceeeeccCCEE
Confidence 68999999744 589999999999999999999853211 11111256788999999999998 4468999999999
Q ss_pred eEEEEecCCCCCchHHHHHHHHHHHH----CCCcEEEeCCCCCCCC--------CHHHHHHHHHHHcCCcEEEEecCCCC
Q psy15698 278 HIFRVFTNQQVSYTSWFLDAFNYAIL----KKMDVLNLSIGGPDFM--------DFPFVDKVWELTANRVILISAIGNDG 345 (577)
Q Consensus 278 ~~~kv~~~~g~~~~~~~~~ai~~a~~----~g~~ViN~S~G~~~~~--------~~~~~~ai~~a~~~gilvV~AAGN~g 345 (577)
+.+|+++ .+.++++|.||++ .++.+||||||++... ...+.+++++|.++|+++|+||||++
T Consensus 80 ~~i~v~~------~~~~~~ai~~A~~~~~~~~v~~in~s~g~~~~~~~~~p~~~~~~~~~av~~a~~~G~~vV~AAGN~~ 153 (277)
T cd04843 80 AVVSSTR------VSNTADAILDAADYLSPGDVILLEMQTGGPNNGYPPLPVEYEQANFDAIRTATDLGIIVVEAAGNGG 153 (277)
T ss_pred EEEEecC------CCCHHHHHHHHHhccCCCCEEEEEccccCCCcCcccCcchhhHHHHHHHHHHHhCCcEEEEeCCCCC
Confidence 9999986 2345667777776 4577899999986421 24567889999999999999999998
Q ss_pred CCCCCC----------CCCC-CCCCeEEEeeecCCC-C-ccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------
Q psy15698 346 PLYGTL----------NNPA-DQMDVIGVGGINFED-Q-IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------- 405 (577)
Q Consensus 346 ~~~~~~----------~~Pa-~~~~vI~VGA~~~~~-~-~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------- 405 (577)
.+.... .+|. ..+++|+|||++.++ . ++.|||+|+. +||+|||++|.+
T Consensus 154 ~~~~~~~~~~g~~~~~~~~~~~~~~vI~VgA~~~~~~~~~~~fSn~G~~------------vdi~APG~~i~s~~~~~~~ 221 (277)
T cd04843 154 QDLDAPVYNRGPILNRFSPDFRDSGAIMVGAGSSTTGHTRLAFSNYGSR------------VDVYGWGENVTTTGYGDLQ 221 (277)
T ss_pred ccccCcccccccccccCCcCcCCCCeEEEEeccCCCCCccccccCCCCc------------cceEcCCCCeEecCCCCcc
Confidence 753222 2232 236899999999764 3 8999999976 899999988753
Q ss_pred -------------CcCCcccccCCcccccccccc----C-CCcccHHHHHHHHhhcce
Q psy15698 406 -------------PSTNGECQYMWPYCTQPLYHG----A-IPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 406 -------------sGTS~A~P~VaG~a~~aL~~~----~-~P~l~~~~i~~~l~~ta~ 445 (577)
+|||||||+|+| ++||+++ . +|.|++.|++++|..|++
T Consensus 222 ~~~~~~~~~~~~~sGTS~AaP~VaG--~aALl~s~~~~~~~p~lt~~~v~~~L~~t~~ 277 (277)
T cd04843 222 DLGGENQDYTDSFSGTSSASPIVAG--AAASIQGIAKQKGGTPLTPIEMRELLTATGT 277 (277)
T ss_pred cccCCCCcceeeecccchhhHHHHH--HHHHHHHHHhhcCCCCCCHHHHHHHHHhcCC
Confidence 699999999999 6688764 3 499999999999999874
No 24
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.9e-39 Score=325.65 Aligned_cols=211 Identities=24% Similarity=0.262 Sum_probs=184.6
Q ss_pred cEEEEEcCCCCCCCCCCCC---CCCCccCCCCC-CCCCCCCchhhhHhhhccC----CCccccCCCCcEeEEEEecCCCC
Q psy15698 217 VKVAVFDTGLSSGHTGFNN---VAERTDWTNEN-TLEDKLGHGTFVAGLIASS----QRCLGFAPDAELHIFRVFTNQQV 288 (577)
Q Consensus 217 V~VaViDtGid~~Hpdl~~---~~~~~~~~~~~-~~~D~~gHGT~VAGiIag~----~~~~GvAP~A~l~~~kv~~~~g~ 288 (577)
|+|||||+||+.+||+|++ +..++++...+ ...|..+|||||||+|++. .++.||||+|+|+.+|+++..+.
T Consensus 1 V~VaviDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~~HGT~vAgiiag~~~~~~~~~Gvap~a~i~~~~~~~~~~~ 80 (242)
T cd07498 1 VVVAIIDTGVDLNHPDLSGKPKLVPGWNFVSNNDPTSDIDGHGTACAGVAAAVGNNGLGVAGVAPGAKLMPVRIADSLGY 80 (242)
T ss_pred CEEEEecCCCCCCChhhccCcCccCCccccCCCCCCCCCCCCHHHHHHHHHhccCCCceeEeECCCCEEEEEEEECCCCC
Confidence 7999999999999999997 45555655443 3577889999999999983 45789999999999999998877
Q ss_pred CchHHHHHHHHHHHHCCCcEEEeCCCCCCCC---CHHHHHHHHHHHc-CCcEEEEecCCCCCCCCCCCCCCCCCCeEEEe
Q psy15698 289 SYTSWFLDAFNYAILKKMDVLNLSIGGPDFM---DFPFVDKVWELTA-NRVILISAIGNDGPLYGTLNNPADQMDVIGVG 364 (577)
Q Consensus 289 ~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~---~~~~~~ai~~a~~-~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VG 364 (577)
...+.++++++|+++++++|||||||..... ...+.+++.++.. +|++||+||||+|.... .+|+..+++|+||
T Consensus 81 ~~~~~~~~ai~~a~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~~~~gvliv~aaGN~g~~~~--~~pa~~~~vi~Vg 158 (242)
T cd07498 81 AYWSDIAQAITWAADNGADVISNSWGGSDSTESISSAIDNAATYGRNGKGGVVLFAAGNSGRSVS--SGYAANPSVIAVA 158 (242)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEeccCCCCCCchHHHHHHHHHHHHhhcCCeEEEEecCCCCCccC--CCCcCCCCeEEEE
Confidence 7888999999999999999999999986532 3567778888888 99999999999997533 3899999999999
Q ss_pred eecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------------------CcCCcccccCCccccccccc
Q psy15698 365 GINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------------------PSTNGECQYMWPYCTQPLYH 425 (577)
Q Consensus 365 A~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------------------sGTS~A~P~VaG~a~~aL~~ 425 (577)
|++..+.++.||++|+. +|++|||.++.+ +|||||+|+|+| ++||++
T Consensus 159 a~~~~~~~~~~s~~g~~------------~~~~apG~~~~~~~~~~~~~~~~~~~~~~~~~GTS~Aap~vaG--~~All~ 224 (242)
T cd07498 159 ATDSNDARASYSNYGNY------------VDLVAPGVGIWTTGTGRGSAGDYPGGGYGSFSGTSFASPVAAG--VAALIL 224 (242)
T ss_pred EeCCCCCccCcCCCCCC------------eEEEeCcCCcccCCccccccccCCCCceEeeCcHHHHHHHHHH--HHHHHH
Confidence 99999999999999987 899999988754 599999999999 779999
Q ss_pred cCCCcccHHHHHHHHhhc
Q psy15698 426 GAIPIIVNVTILNGMGVV 443 (577)
Q Consensus 426 ~~~P~l~~~~i~~~l~~t 443 (577)
+.+|.|++.+|+++|..|
T Consensus 225 ~~~p~l~~~~i~~~L~~t 242 (242)
T cd07498 225 SANPNLTPAEVEDILTST 242 (242)
T ss_pred HhCCCCCHHHHHHHHHhC
Confidence 999999999999999865
No 25
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr
Probab=100.00 E-value=1.5e-39 Score=343.36 Aligned_cols=232 Identities=29% Similarity=0.408 Sum_probs=191.4
Q ss_pred HHHhcCC-CCCCcEEEEEcCCCCCCCCCCCCCC------------------------------CCccCCCCCC----CCC
Q psy15698 206 TLWDLGI-RGSGVKVAVFDTGLSSGHTGFNNVA------------------------------ERTDWTNENT----LED 250 (577)
Q Consensus 206 ~~w~~g~-~G~gV~VaViDtGid~~Hpdl~~~~------------------------------~~~~~~~~~~----~~D 250 (577)
++|+.+. +|+||+||||||||+++||+|.... .+++|.+... ..+
T Consensus 1 ~~w~~~~~~G~gv~VaViDtGv~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (346)
T cd07475 1 PLWDKGGYKGEGMVVAVIDSGVDPTHDAFRLDDDSKAKYSEEFEAKKKKAGIGYGKYYNEKVPFAYNYADNNDDILDEDD 80 (346)
T ss_pred ChhhhcCCCCCCcEEEEEeCCCCCCChhHccCCCcccccchhhhhhhhcccCCCCcccccCCCeeEcCCCCCCccCCCCC
Confidence 3688877 9999999999999999999997321 1234443221 346
Q ss_pred CCCchhhhHhhhccCC-------CccccCCCCcEeEEEEecC--CCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCC---
Q psy15698 251 KLGHGTFVAGLIASSQ-------RCLGFAPDAELHIFRVFTN--QQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDF--- 318 (577)
Q Consensus 251 ~~gHGT~VAGiIag~~-------~~~GvAP~A~l~~~kv~~~--~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~--- 318 (577)
..+|||||||||+|.. ++.||||+|+|+.+|+++. ........++++++++++.+++|||||||....
T Consensus 81 ~~~HGT~vagiiag~~~~~~~~~~~~GiAp~a~l~~~~v~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~~~ 160 (346)
T cd07475 81 GSSHGMHVAGIVAGNGDEEDNGEGIKGVAPEAQLLAMKVFSNPEGGSTYDDAYAKAIEDAVKLGADVINMSLGSTAGFVD 160 (346)
T ss_pred CCCcHHHHHHHHhcCCCccccCCceEEeCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCC
Confidence 7799999999999933 7899999999999999983 566778889999999999999999999998642
Q ss_pred CCHHHHHHHHHHHcCCcEEEEecCCCCCCCC--------------CCCCCCCCCCeEEEeeec------CCCCccCCCCC
Q psy15698 319 MDFPFVDKVWELTANRVILISAIGNDGPLYG--------------TLNNPADQMDVIGVGGIN------FEDQIAKFSSR 378 (577)
Q Consensus 319 ~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~--------------~~~~Pa~~~~vI~VGA~~------~~~~~a~fS~~ 378 (577)
....+.++++++.++|++||+||||+|.... .+..|+..+++|+||+++ ..+.+..||++
T Consensus 161 ~~~~~~~~~~~a~~~giliv~aAGN~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~i~Vga~~~~~~~~~~~~~~~~S~~ 240 (346)
T cd07475 161 LDDPEQQAIKRAREAGVVVVVAAGNDGNSGSGTSKPLATNNPDTGTVGSPATADDVLTVASANKKVPNPNGGQMSGFSSW 240 (346)
T ss_pred CCCHHHHHHHHHhhCCeEEEEeCCCCCccCccccCcccccCCCcceecCCccCCCceEEeecccccCCCCCCccCCCcCC
Confidence 2457888999999999999999999985321 255788999999999998 66788999999
Q ss_pred CCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccC----CCcccHHH----HHHHH
Q psy15698 379 GMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGA----IPIIVNVT----ILNGM 440 (577)
Q Consensus 379 G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~----~P~l~~~~----i~~~l 440 (577)
|+. ..++.||||+|||.+|++ +|||||||+|+| ++||++++ +|.+++.+ +++.|
T Consensus 241 G~~------~~~~~~pdi~apG~~i~s~~~~~~~~~~~GTS~AaP~VaG--~aALl~~~~~~~~p~l~~~~~~~~ik~~l 312 (346)
T cd07475 241 GPT------PDLDLKPDITAPGGNIYSTVNDNTYGYMSGTSMASPHVAG--ASALVKQRLKEKYPKLSGEELVDLVKNLL 312 (346)
T ss_pred CCC------cccCcCCeEEeCCCCeEEecCCCceEeeCcHHHHHHHHHH--HHHHHHHHHHhhCCCCCHHHHHHHHHHHH
Confidence 954 578899999999999874 799999999999 77998887 68888877 55566
Q ss_pred hhcce
Q psy15698 441 GVVGK 445 (577)
Q Consensus 441 ~~ta~ 445 (577)
..||.
T Consensus 313 ~~ta~ 317 (346)
T cd07475 313 MNTAT 317 (346)
T ss_pred HhcCC
Confidence 66776
No 26
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=8.7e-40 Score=337.40 Aligned_cols=227 Identities=25% Similarity=0.334 Sum_probs=184.6
Q ss_pred cEEEEEcCCCCCCCCCCCCCCCCccCCCCCC--CCCCCCchhhhHhhhccC----CCccccCCCCcEeEEEEecCCC---
Q psy15698 217 VKVAVFDTGLSSGHTGFNNVAERTDWTNENT--LEDKLGHGTFVAGLIASS----QRCLGFAPDAELHIFRVFTNQQ--- 287 (577)
Q Consensus 217 V~VaViDtGid~~Hpdl~~~~~~~~~~~~~~--~~D~~gHGT~VAGiIag~----~~~~GvAP~A~l~~~kv~~~~g--- 287 (577)
.+||||||||+.+||+|.............. ..|..||||||||+|+++ .+..|+||+|+|+.+|+++..+
T Consensus 1 p~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~~~~gvap~~~l~~~kv~~~~g~~~ 80 (291)
T cd04847 1 PIVCVLDSGINRGHPLLAPALAEDDLDSDEPGWTADDLGHGTAVAGLALYGDLTLPGNGLPRPGCRLESVRVLPPNGEND 80 (291)
T ss_pred CEEEEecCCCCCCChhhhhhhccccccccCCCCcCCCCCChHHHHHHHHcCcccCCCCCCcccceEEEEEEEcCCCCCCC
Confidence 3799999999999999996554433332222 578899999999999872 3678999999999999999874
Q ss_pred -CCchHHHHHHHHHHHHCC---CcEEEeCCCCCCCCC----HHHHHHHHH-HHcCCcEEEEecCCCCCCCCC--------
Q psy15698 288 -VSYTSWFLDAFNYAILKK---MDVLNLSIGGPDFMD----FPFVDKVWE-LTANRVILISAIGNDGPLYGT-------- 350 (577)
Q Consensus 288 -~~~~~~~~~ai~~a~~~g---~~ViN~S~G~~~~~~----~~~~~ai~~-a~~~gilvV~AAGN~g~~~~~-------- 350 (577)
..+...++++|+|+++++ ++|||||||...... ..+..++.+ +.++|++||+||||++.....
T Consensus 81 ~~~~~~~~~~ai~~a~~~~~~~~~ViN~SlG~~~~~~~~~~~~~~~~id~~a~~~gvlvV~aAGN~g~~~~~~~~~~~~~ 160 (291)
T cd04847 81 PELYGDITLRAIRRAVIQNPDIVRVFNLSLGSPLPIDDGRPSSWAAALDQLAAEYDVLFVVSAGNLGDDDAADGPPRIQD 160 (291)
T ss_pred ccChHHHHHHHHHHHHHhCCCceeEEEEecCCCCCccCCCCCcHHHHHHHHhccCCeEEEEECCCCCccccccccccccc
Confidence 456678999999999853 499999999864321 245666654 568999999999999975332
Q ss_pred --CCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCc--------CCCCCCCccccEEecCCceec---------------
Q psy15698 351 --LNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWE--------LPGGYGRVKPDIVTYGSAVRG--------------- 405 (577)
Q Consensus 351 --~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~--------~p~~~g~~kpDi~ApG~~I~s--------------- 405 (577)
+..|+..+++|+|||++.++.++.||++|...+. .|+.++++||||+|||+++.+
T Consensus 161 ~~i~~Pa~~~~vItVgA~~~~~~~~~~s~~~~~~~~~~~~fs~~Gp~~~~~~KPDl~apG~~i~~~~~~~~~~~~~~~~~ 240 (291)
T cd04847 161 DEIEDPADSVNALTVGAITSDDDITDRARYSAVGPAPAGATTSSGPGSPGPIKPDVVAFGGNLAYDPSGNAADGDLSLLT 240 (291)
T ss_pred cccCCHHHhhhheeeeeeecCccCCCcccccccccccCCCccccCCCCCCCcCCcEEeeCCceeecCCCCCccCcceeee
Confidence 3468999999999999999988887777754321 366789999999999999842
Q ss_pred -------------CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 406 -------------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 406 -------------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
+|||||+|+|+| ++||+++.+|.+++.+|+.+|..+|.
T Consensus 241 ~~~~~~~~~~~~~~GTS~AaP~Vag--~aAll~~~~p~~t~~~ikalL~~sA~ 291 (291)
T cd04847 241 TLSSPSGGGFVTVGGTSFAAPLAAR--LAAGLFAELPELSPETIRALLIHSAE 291 (291)
T ss_pred cccCCCCCcccccccchHHHHHHHH--HHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 699999999999 77999999999999999999998873
No 27
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.3e-39 Score=338.74 Aligned_cols=217 Identities=24% Similarity=0.339 Sum_probs=181.7
Q ss_pred ccCchHHHh-----cCCCCCCcEEEEEcCCCCCCCCCCCCCCC-------------C---------------ccCCC---
Q psy15698 201 ILQANTLWD-----LGIRGSGVKVAVFDTGLSSGHTGFNNVAE-------------R---------------TDWTN--- 244 (577)
Q Consensus 201 ~i~~~~~w~-----~g~~G~gV~VaViDtGid~~Hpdl~~~~~-------------~---------------~~~~~--- 244 (577)
.++++.+|+ .+++|+||+||||||||+++||+|.+... . ++|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~g~~~~~~~~~ 90 (307)
T cd04852 11 FLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSCNNKLIGARYFSDGYD 90 (307)
T ss_pred HcCCCCCCCcccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCcCCeEEEEEEcccchh
Confidence 355555555 59999999999999999999999963110 0 11111
Q ss_pred ----------CCCCCCCCCchhhhHhhhccC------------CCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHH
Q psy15698 245 ----------ENTLEDKLGHGTFVAGLIASS------------QRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI 302 (577)
Q Consensus 245 ----------~~~~~D~~gHGT~VAGiIag~------------~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~ 302 (577)
...+.|..||||||||+|+|. ..+.||||+|+|+++|+++..+.+..+++++|+++|+
T Consensus 91 ~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~~~~~~~~~~~ai~~a~ 170 (307)
T cd04852 91 AYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAI 170 (307)
T ss_pred hccCcccccCCCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCCCCccHHHHHHHHHHHH
Confidence 123467789999999999983 2367999999999999999877788999999999999
Q ss_pred HCCCcEEEeCCCCCC--CCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCC
Q psy15698 303 LKKMDVLNLSIGGPD--FMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGM 380 (577)
Q Consensus 303 ~~g~~ViN~S~G~~~--~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~ 380 (577)
+++++|||||||... .....+..++.++.++|+++|+||||+|+ ....+|+..+++|+||+++
T Consensus 171 ~~g~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~gilvV~aAGN~g~--~~~~~~~~~~~vi~Vga~~------------- 235 (307)
T cd04852 171 ADGVDVISYSIGGGSPDPYEDPIAIAFLHAVEAGIFVAASAGNSGP--GASTVPNVAPWVTTVAAST------------- 235 (307)
T ss_pred HcCCCEEEeCCCCCCCCcccCHHHHHHHHHHhCCCEEEEECCCCCC--CCCcccCCCCCeEEEEecc-------------
Confidence 999999999999875 34567888888899999999999999996 4456899999999999998
Q ss_pred CCCcCCCCCCCccccEEecCCceec--------------------CcCCcccccCCccccccccccCCCcccHHHHHHHH
Q psy15698 381 TAWELPGGYGRVKPDIVTYGSAVRG--------------------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGM 440 (577)
Q Consensus 381 ~~~~~p~~~g~~kpDi~ApG~~I~s--------------------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l 440 (577)
.||||+|||.+|.+ +|||||||+|+| ++||+++.+|.+++.+|+++|
T Consensus 236 -----------~~~di~apG~~i~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG--~aALl~~~~p~~t~~~v~~~L 302 (307)
T cd04852 236 -----------LKPDIAAPGVDILAAWTPEGADPGDARGEDFAFISGTSMASPHVAG--VAALLKSAHPDWSPAAIKSAL 302 (307)
T ss_pred -----------CccceeeccCceeecccCccccccCCCCCcEEEeCcHHHHHHHHHH--HHHHHHHHCCCCCHHHHHHHH
Confidence 24999999998753 699999999999 779999999999999999999
Q ss_pred hhcce
Q psy15698 441 GVVGK 445 (577)
Q Consensus 441 ~~ta~ 445 (577)
..||+
T Consensus 303 ~~tA~ 307 (307)
T cd04852 303 MTTAY 307 (307)
T ss_pred HHhcC
Confidence 99984
No 28
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=8.6e-39 Score=329.88 Aligned_cols=233 Identities=31% Similarity=0.393 Sum_probs=196.5
Q ss_pred CCCcEEEEEcCCCCCCCCCCC-------CCCCCccCCCCC-C---------------CCCCCCchhhhHhhhccC----C
Q psy15698 214 GSGVKVAVFDTGLSSGHTGFN-------NVAERTDWTNEN-T---------------LEDKLGHGTFVAGLIASS----Q 266 (577)
Q Consensus 214 G~gV~VaViDtGid~~Hpdl~-------~~~~~~~~~~~~-~---------------~~D~~gHGT~VAGiIag~----~ 266 (577)
|+||+|||||+||+.+||+|. ++..++++.... . ..|..+|||||||+|+|. .
T Consensus 1 G~gV~VaViDsGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HGT~vAgiiag~~~n~~ 80 (295)
T cd07474 1 GKGVKVAVIDTGIDYTHPDLGGPGFPNDKVKGGYDFVDDDYDPMDTRPYPSPLGDASAGDATGHGTHVAGIIAGNGVNVG 80 (295)
T ss_pred CCCCEEEEEECCcCCCCcccccCCCCCCceeeeeECccCCCCcccccccccccccCCCCCCCCcHHHHHHHHhcCCCccC
Confidence 799999999999999999996 355555554321 1 234779999999999983 3
Q ss_pred CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCC-CCHHHHHHHHHHHcCCcEEEEecCCCC
Q psy15698 267 RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDF-MDFPFVDKVWELTANRVILISAIGNDG 345 (577)
Q Consensus 267 ~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~-~~~~~~~ai~~a~~~gilvV~AAGN~g 345 (577)
++.||||+|+|+.+|+++..+......++++|+|+++++++|||||||.... ....+.+++.++.++|+++|+||||+|
T Consensus 81 ~~~Giap~a~i~~~~~~~~~~~~~~~~~~~ai~~a~~~~~~Iin~S~g~~~~~~~~~~~~~~~~~~~~gil~V~aAGN~g 160 (295)
T cd07474 81 TIKGVAPKADLYAYKVLGPGGSGTTDVIIAAIEQAVDDGMDVINLSLGSSVNGPDDPDAIAINNAVKAGVVVVAAAGNSG 160 (295)
T ss_pred ceEeECCCCeEEEEEeecCCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHhcCCEEEEECCCCC
Confidence 6789999999999999987777888999999999999999999999997642 356788889999999999999999999
Q ss_pred CCCCCCCCCCCCCCeEEEeeec-----CCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcC
Q psy15698 346 PLYGTLNNPADQMDVIGVGGIN-----FEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PST 408 (577)
Q Consensus 346 ~~~~~~~~Pa~~~~vI~VGA~~-----~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGT 408 (577)
........|+..+++|+||+++ .......|+++|. +....++||||.|||.+|.+ +||
T Consensus 161 ~~~~~~~~pa~~~~~i~Vga~~~~~~~~~~~~~~~~s~~~-----~~~~~~~kpdv~apG~~i~~~~~~~~~~~~~~~GT 235 (295)
T cd07474 161 PAPYTIGSPATAPSAITVGASTVADVAEADTVGPSSSRGP-----PTSDSAIKPDIVAPGVDIMSTAPGSGTGYARMSGT 235 (295)
T ss_pred CCCCcccCCCcCCCeEEEeeeeccCcCCCCceeccCCCCC-----CCCCCCcCCCEECCcCceEeeccCCCCceEEeccH
Confidence 8666667899999999999987 3345566666653 33467899999999998863 699
Q ss_pred CcccccCCccccccccccCCCcccHHHHHHHHhhcceecCCCccc
Q psy15698 409 NGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILERPKWY 453 (577)
Q Consensus 409 S~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~~~~ 453 (577)
|||||+|+| ++||+++.+|.+++.+|+++|..||......+..
T Consensus 236 S~AaP~vaG--~aAll~~~~p~l~~~~v~~~L~~tA~~~~~~~~~ 278 (295)
T cd07474 236 SMAAPHVAG--AAALLKQAHPDWSPAQIKAALMNTAKPLYDSDGV 278 (295)
T ss_pred HHHHHHHHH--HHHHHHhhCCCCCHHHHHHHHHhhCcccccCCCC
Confidence 999999999 7799999999999999999999999988765544
No 29
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II. Tripeptidyl aminopeptidases II are member of the peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Tripeptidyl aminopeptidase II removes tripeptides from the free N terminus of oligopeptides as well as having endoproteolytic activity. Some tripeptidyl aminopeptidases have been shown to cleave tripeptides and small peptides, e.g. angiotensin II and glucagon, while others are believed to be involved in MHC I processing.
Probab=100.00 E-value=1.2e-38 Score=338.94 Aligned_cols=190 Identities=26% Similarity=0.298 Sum_probs=158.3
Q ss_pred CCCCchhhhHhhhccC----CCccccCCCCcEeEEEEecCCCCC--chHHHHHHHHHHHHCCCcEEEeCCCCCCCC--CH
Q psy15698 250 DKLGHGTFVAGLIASS----QRCLGFAPDAELHIFRVFTNQQVS--YTSWFLDAFNYAILKKMDVLNLSIGGPDFM--DF 321 (577)
Q Consensus 250 D~~gHGT~VAGiIag~----~~~~GvAP~A~l~~~kv~~~~g~~--~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~--~~ 321 (577)
|+.+|||||||||+|. .++.||||+|+|+++|+++..... ....+++|+++|+++|++|||||||.+... ..
T Consensus 183 d~~gHGThVAGIIAg~~~~~~~~~GVAP~A~I~svkv~d~~~gs~~t~~~l~~ai~~ai~~gadVIN~SlG~~~~~~~~~ 262 (412)
T cd04857 183 DSGAHGTHVAGIAAAHFPEEPERNGVAPGAQIVSIKIGDTRLGSMETGTALVRAMIAAIETKCDLINMSYGEATHWPNSG 262 (412)
T ss_pred CCCCCHHHHHHHHhCCCCCCCceEEecCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHcCCCEEEecCCcCCCCccch
Confidence 5568999999999983 467999999999999998754321 235789999999999999999999986432 23
Q ss_pred HHHHHHHHH-HcCCcEEEEecCCCCCCCCCCCCCC-CCCCeEEEeeecC--------------CCCccCCCCCCCCCCcC
Q psy15698 322 PFVDKVWEL-TANRVILISAIGNDGPLYGTLNNPA-DQMDVIGVGGINF--------------EDQIAKFSSRGMTAWEL 385 (577)
Q Consensus 322 ~~~~ai~~a-~~~gilvV~AAGN~g~~~~~~~~Pa-~~~~vI~VGA~~~--------------~~~~a~fS~~G~~~~~~ 385 (577)
.+.+++.++ .++|++||+||||+|+..+++.+|+ ..++||+|||+.. .+.++.|||+||+
T Consensus 263 ~~~~~~~~~~~~~GVlvVaAAGN~G~~~~tv~~P~~~~~~VIsVGA~~~~~~~~~~y~~~~~~~~~~~~fSSrGP~---- 338 (412)
T cd04857 263 RIIELMNEAVNKHGVIFVSSAGNNGPALSTVGAPGGTTSSVIGVGAYVSPEMMAAEYSLREKLPGNQYTWSSRGPT---- 338 (412)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCccccCCccccCCCeEEEcceeccCccccccccccccCCccccccccCCc----
Confidence 456666654 4689999999999999888888897 5899999999853 3567899999955
Q ss_pred CCCCCCccccEEecCCceec------------CcCCcccccCCcccccccccc----CCCcccHHHHHHHHhhcceec
Q psy15698 386 PGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYHG----AIPIIVNVTILNGMGVVGKIL 447 (577)
Q Consensus 386 p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~~----~~P~l~~~~i~~~l~~ta~~~ 447 (577)
.+|+.||||+|||..|.+ +|||||+|||+| ++||+++ ..|.+++.+|+++|..||+.+
T Consensus 339 --~dG~~~pdI~APG~~I~s~p~~~~~~~~~~sGTSmAaP~VAG--~aALllSa~k~~~~~~tp~~Vk~aL~~TA~~~ 412 (412)
T cd04857 339 --ADGALGVSISAPGGAIASVPNWTLQGSQLMNGTSMSSPNACG--GIALLLSGLKAEGIPYTPYSVRRALENTAKKL 412 (412)
T ss_pred --ccCCcCceEEeCCCcEEEcccCCCCCeEEecccHHHHHHHHH--HHHHHHhhhhhcCCCCCHHHHHHHHHHhCccC
Confidence 589999999999999864 799999999999 6688875 468999999999999999763
No 30
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases. Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h
Probab=100.00 E-value=1.9e-38 Score=326.85 Aligned_cols=215 Identities=27% Similarity=0.336 Sum_probs=179.6
Q ss_pred CcEEEEEcCCCCCCCCCCCC-CCCCccCC-------C--------CCCCCCCCCchhhhHhhhccCCCccccCCCCcEeE
Q psy15698 216 GVKVAVFDTGLSSGHTGFNN-VAERTDWT-------N--------ENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHI 279 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~~-~~~~~~~~-------~--------~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~ 279 (577)
.|+||||||||+.+||+|++ +.....+. . .+...|..||||||||+|++.....||||+|+|+.
T Consensus 1 ~V~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~GvAp~a~i~~ 80 (294)
T cd07482 1 KVTVAVIDSGIDPDHPDLKNSISSYSKNLVPKGGYDGKEAGETGDINDIVDKLGHGTAVAGQIAANGNIKGVAPGIGIVS 80 (294)
T ss_pred CcEEEEEeCCCCCCChhHhhcccccccccccCCCcCCccccccCCCCcCCCCCCcHhHHHHHHhcCCCCceeCCCCEEEE
Confidence 48999999999999999993 22111111 1 11235668999999999999666679999999999
Q ss_pred EEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCC----------CHHHHHHHHHHHcCCcEEEEecCCCCCCC-
Q psy15698 280 FRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFM----------DFPFVDKVWELTANRVILISAIGNDGPLY- 348 (577)
Q Consensus 280 ~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~----------~~~~~~ai~~a~~~gilvV~AAGN~g~~~- 348 (577)
+|+++..+.....+++++|+||++++++|||||||..... ...+.+++.++.++|++||+||||+|...
T Consensus 81 ~~v~~~~~~~~~~~~~~ai~~a~~~~~~vin~S~G~~~~~~~~~~~~~~~~~~~~~~i~~a~~~g~lvv~AAGN~g~~~~ 160 (294)
T cd07482 81 YRVFGSCGSAESSWIIKAIIDAADDGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYAKSKGSIVVAAAGNDGLDVS 160 (294)
T ss_pred EEeecCCCCcCHHHHHHHHHHHHHCCCCEEEeCCccCCCCCcccccchhhhHHHHHHHHHHHHCCCEEEEeCCCCCcccc
Confidence 9999987776888999999999999999999999974321 13577788888899999999999999643
Q ss_pred -------------------CCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCcee-----
Q psy15698 349 -------------------GTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR----- 404 (577)
Q Consensus 349 -------------------~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~----- 404 (577)
..+.+|+..+++|+|||++..+.++.||++|... +|+++||+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~vi~Vga~~~~~~~~~~S~~g~~~-----------~~~~apG~~~~~~~~~ 229 (294)
T cd07482 161 NKQELLDFLSSGDDFSVNGEVYDVPASLPNVITVSATDNNGNLSSFSNYGNSR-----------IDLAAPGGDFLLLDQY 229 (294)
T ss_pred cccccccccccccccccCCcceecccccCceEEEEeeCCCCCcCccccCCCCc-----------ceEECCCCCccccccc
Confidence 1467899999999999999999999999998653 78888887763
Q ss_pred ---------------------------cCcCCcccccCCccccccccccCCCcccH-HHHHHHHhhc
Q psy15698 405 ---------------------------GPSTNGECQYMWPYCTQPLYHGAIPIIVN-VTILNGMGVV 443 (577)
Q Consensus 405 ---------------------------ssGTS~A~P~VaG~a~~aL~~~~~P~l~~-~~i~~~l~~t 443 (577)
.+|||||||+|+| ++||+++++|.+++ .+|+++|..|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GTS~AaP~VaG--~aAll~~~~p~~~~~~~v~~~L~~T 294 (294)
T cd07482 230 GKEKWVNNGLMTKEQILTTAPEGGYAYMYGTSLAAPKVSG--ALALIIDKNPLKKPPDEAIRILYNT 294 (294)
T ss_pred CccccccccccccceeeecccCCceEeecchhhhhHHHHH--HHHHHHHHCCCCCcHHHHHHHHhhC
Confidence 3799999999999 77999999999999 9999999875
No 31
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins. GSP (germination-specific protease) converts the spore peptidoglycan hydrolase (SleC) precursor to an active enzyme during germination of Clostridium perfringens S40 spores. Analysis of an enzyme fraction of GSP showed that it was composed of a gene cluster containing the processed forms of products of cspA, cspB, and cspC which are positioned in a tandem array just upstream of the 5' end of sleC. The amino acid sequences deduced from the nucleotide sequences of the csp genes showed significant similarity and showed a high degree of homology with those of the catalytic domain and the oxyanion binding region of subtilisin-like serine proteases. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure
Probab=100.00 E-value=2.6e-38 Score=344.37 Aligned_cols=239 Identities=28% Similarity=0.287 Sum_probs=192.6
Q ss_pred CCCCCcEEEEEcCCCCCCCCCCCCCC------CCccCCC-------------------------------CCCCCCCCCc
Q psy15698 212 IRGSGVKVAVFDTGLSSGHTGFNNVA------ERTDWTN-------------------------------ENTLEDKLGH 254 (577)
Q Consensus 212 ~~G~gV~VaViDtGid~~Hpdl~~~~------~~~~~~~-------------------------------~~~~~D~~gH 254 (577)
++|+||+|||||||||+.||+|.+.. ..++... .....|..||
T Consensus 1 ltG~GV~VaVIDtGId~~hp~F~~~dg~tRi~~~wDq~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~~D~~GH 80 (455)
T cd07478 1 LTGKGVLVGIIDTGIDYLHPEFRNEDGTTRILYIWDQTIPGGPPPGGYYGGGEYTEEIINAALASDNPYDIVPSRDENGH 80 (455)
T ss_pred CCCCceEEEEEECCCCCCCHHHccCCCCchhHHhhhCcCCCCCCCccccCceEEeHHHHHHHHhcCCccccCcCCCCCCc
Confidence 48999999999999999999998421 1111110 0124577899
Q ss_pred hhhhHhhhccC----CCccccCCCCcEeEEEEecCCCC----------CchHHHHHHHHHHHHC-----CCcEEEeCCCC
Q psy15698 255 GTFVAGLIASS----QRCLGFAPDAELHIFRVFTNQQV----------SYTSWFLDAFNYAILK-----KMDVLNLSIGG 315 (577)
Q Consensus 255 GT~VAGiIag~----~~~~GvAP~A~l~~~kv~~~~g~----------~~~~~~~~ai~~a~~~-----g~~ViN~S~G~ 315 (577)
||||||||||. .++.||||+|+|+++|++...+. ...+++++||+|+++. .+.|||||||.
T Consensus 81 GThvAGIiag~~~~~~~~~GvAp~a~l~~vk~~~~~~~~~~~~~~~~~~~~~~i~~ai~~~~~~a~~~~~p~VInlSlG~ 160 (455)
T cd07478 81 GTHVAGIAAGNGDNNPDFKGVAPEAELIVVKLKQAKKYLREFYEDVPFYQETDIMLAIKYLYDKALELNKPLVINISLGT 160 (455)
T ss_pred hHHHHHHHhcCCCCCCCccccCCCCcEEEEEeecCCCcccccccccccCcHHHHHHHHHHHHHHHHHhCCCeEEEEccCc
Confidence 99999999982 56899999999999999988764 5678999999999864 47899999997
Q ss_pred CC---CCCHHHHHHHHHHHcC-CcEEEEecCCCCCC--------------------------------------------
Q psy15698 316 PD---FMDFPFVDKVWELTAN-RVILISAIGNDGPL-------------------------------------------- 347 (577)
Q Consensus 316 ~~---~~~~~~~~ai~~a~~~-gilvV~AAGN~g~~-------------------------------------------- 347 (577)
.. .....+.+++.++..+ |+++|+||||+|..
T Consensus 161 ~~g~~~g~~~l~~~i~~~~~~~gv~vV~aaGNeg~~~~h~~~~~~~~~~~~~ie~~v~~~~~~~~~eiW~~~~d~~~v~i 240 (455)
T cd07478 161 NFGSHDGTSLLERYIDAISRLRGIAVVVGAGNEGNTQHHHSGGIVPNGETKTVELNVGEGEKGFNLEIWGDFPDRFSVSI 240 (455)
T ss_pred CCCCCCCccHHHHHHHHHHhhCCeEEEEeCCCCCCcCCceeeeeccCCceEEEEEEECCCCcceEEEEecCCCCEEEEEE
Confidence 42 2356788888887776 99999999998731
Q ss_pred --------------------------------------------------------------------------------
Q psy15698 348 -------------------------------------------------------------------------------- 347 (577)
Q Consensus 348 -------------------------------------------------------------------------------- 347 (577)
T Consensus 241 ~sP~Ge~~~~i~~~~~~~~~~~~~~~~t~i~v~y~~~~~~~g~~~i~i~~~~~~~GiW~i~~~~~~~~~g~~~~Wlp~~~ 320 (455)
T cd07478 241 ISPSGESSGRINPGIGGSESYKFVFEGTTVYVYYYLPEPYTGDQLIFIRFKNIKPGIWKIRLTGVSITDGRFDAWLPSRG 320 (455)
T ss_pred ECCCCCccCccCcCCCcceeEEEEECCeEEEEEEcCCCCCCCCeEEEEEccCCCccceEEEEEeccCCCceEEEEecCcC
Confidence
Q ss_pred -------------CCCCCCCCCCCCeEEEeeecCCC-CccCCCCCCCCCCcCCCCCCCccccEEecCCceec--------
Q psy15698 348 -------------YGTLNNPADQMDVIGVGGINFED-QIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------- 405 (577)
Q Consensus 348 -------------~~~~~~Pa~~~~vI~VGA~~~~~-~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------- 405 (577)
+.++..|+..+++|+|||++... .++.||++||+ .++++||||+|||++|++
T Consensus 321 ~~~~~t~f~~~~~~~tit~Pa~~~~vitVga~~~~~~~~~~~Ss~G~~------~~~~~kpdi~APG~~i~s~~~~~~~~ 394 (455)
T cd07478 321 LLSENTRFLEPDPYTTLTIPGTARSVITVGAYNQNNNSIAIFSGRGPT------RDGRIKPDIAAPGVNILTASPGGGYT 394 (455)
T ss_pred cCCCCCEeecCCCCceEecCCCCCCcEEEEEEeCCCCcccCccCCCcC------CCCCcCceEEecCCCEEEeecCCcEE
Confidence 01233477889999999999765 59999999955 589999999999999975
Q ss_pred --CcCCcccccCCccccccccccC------CCcccHHHHHHHHhhcceecC-CCccccCCCC
Q psy15698 406 --PSTNGECQYMWPYCTQPLYHGA------IPIIVNVTILNGMGVVGKILE-RPKWYPYLPH 458 (577)
Q Consensus 406 --sGTS~A~P~VaG~a~~aL~~~~------~P~l~~~~i~~~l~~ta~~~~-~~~~~p~~~~ 458 (577)
+|||||||+|+| ++||+++. +|.+++.+|++.|..+|+..+ .+.+++.+||
T Consensus 395 ~~sGTS~Aap~vaG--~aALl~~~~~~~~~~p~~~~~~ik~~L~~tA~~~~~~~~pn~~~Gy 454 (455)
T cd07478 395 TRSGTSVAAAIVAG--ACALLLQWGIVRGNDPYLYGEKIKTYLIRGARRRPGDEYPNPEWGY 454 (455)
T ss_pred eeCcHHHHHHHHHH--HHHHHHHhchhccCCCCCCHHHHHHHHHHhCccCCCCCCCCCCCCC
Confidence 799999999999 66888765 467899999999999999887 4566776666
No 32
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases. Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases
Probab=100.00 E-value=1.5e-38 Score=327.52 Aligned_cols=226 Identities=26% Similarity=0.302 Sum_probs=182.3
Q ss_pred cCCCCCCcEEEEEcCCCCCCCCCCCCCC------------CCccCCCCCCCCCCCCchhhhHhhhccC---C----Cccc
Q psy15698 210 LGIRGSGVKVAVFDTGLSSGHTGFNNVA------------ERTDWTNENTLEDKLGHGTFVAGLIASS---Q----RCLG 270 (577)
Q Consensus 210 ~g~~G~gV~VaViDtGid~~Hpdl~~~~------------~~~~~~~~~~~~D~~gHGT~VAGiIag~---~----~~~G 270 (577)
+|++|+||+|||||+||+.+||+|.... ....+. ....|..+|||||||+|++. . ++.|
T Consensus 2 ~g~tG~gv~VaviDtGi~~~hp~l~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~HGT~vAgiia~~~~~~~~~~~~~G 79 (293)
T cd04842 2 LGLTGKGQIVGVADTGLDTNHCFFYDPNFNKTNLFHRKIVRYDSLS--DTKDDVDGHGTHVAGIIAGKGNDSSSISLYKG 79 (293)
T ss_pred CCcCCcCCEEEEEecCCCCCCCcccCCCcCcCccCcccEEEeeccC--CCCCCCCCCcchhheeeccCCcCCCccccccc
Confidence 5899999999999999999999995411 111111 12337789999999999992 2 6799
Q ss_pred cCCCCcEeEEEEecCCC-CCchHHHHHHHHHHHHCCCcEEEeCCCCCCCC-CHHHHHHHHHHH-c-CCcEEEEecCCCCC
Q psy15698 271 FAPDAELHIFRVFTNQQ-VSYTSWFLDAFNYAILKKMDVLNLSIGGPDFM-DFPFVDKVWELT-A-NRVILISAIGNDGP 346 (577)
Q Consensus 271 vAP~A~l~~~kv~~~~g-~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~-~~~~~~ai~~a~-~-~gilvV~AAGN~g~ 346 (577)
+||+|+|+.+|+++..+ ......+.++++++.+.+++|||||||..... ......++.++. + +|+++|+||||++.
T Consensus 80 vAp~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~g~lvV~aAGN~g~ 159 (293)
T cd04842 80 VAPKAKLYFQDIGDTSGNLSSPPDLNKLFSPMYDAGARISSNSWGSPVNNGYTLLARAYDQFAYNNPDILFVFSAGNDGN 159 (293)
T ss_pred ccccCeEEEEEeeccCccccCCccHHHHHHHHHHhCCEEEeccCCCCCccccchHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 99999999999988765 34456788999999999999999999987531 234445554443 3 79999999999997
Q ss_pred CCCC-CCCCCCCCCeEEEeeecCCCC---------------ccCCCCCCCCCCcCCCCCCCccccEEecCCceec-----
Q psy15698 347 LYGT-LNNPADQMDVIGVGGINFEDQ---------------IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----- 405 (577)
Q Consensus 347 ~~~~-~~~Pa~~~~vI~VGA~~~~~~---------------~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----- 405 (577)
+... +.+|+..+++|+|||++..+. ++.||++|+. .+++.||||+|||.+|.+
T Consensus 160 ~~~~~~~~pa~~~~vi~Vga~~~~~~~~~~~~~~~~~~~~~~~~~S~~G~~------~~~~~~pdv~ApG~~i~~~~~~~ 233 (293)
T cd04842 160 DGSNTIGSPATAKNVLTVGASNNPSVSNGEGGLGQSDNSDTVASFSSRGPT------YDGRIKPDLVAPGTGILSARSGG 233 (293)
T ss_pred CCCccccCcccccceEEEeeccCCCcccccccccccCCCCccccccCcCCC------CCCCcCCCEECCCCCeEeccCCC
Confidence 5442 679999999999999998877 8999999954 588999999999998853
Q ss_pred --------------CcCCcccccCCccccccccccCCC--------cccHHHHHHHHhhcce
Q psy15698 406 --------------PSTNGECQYMWPYCTQPLYHGAIP--------IIVNVTILNGMGVVGK 445 (577)
Q Consensus 406 --------------sGTS~A~P~VaG~a~~aL~~~~~P--------~l~~~~i~~~l~~ta~ 445 (577)
+|||+|||+|+| ++||+++.+| .++..+++..|..||+
T Consensus 234 ~~~~~~~~~~~~~~~GTS~AaP~VaG--~aAll~~~~~~~~~~~~~~~~~~~~ka~l~~sA~ 293 (293)
T cd04842 234 GGIGDTSDSAYTSKSGTSMATPLVAG--AAALLRQYFVDGYYPTKFNPSAALLKALLINSAR 293 (293)
T ss_pred CCCCCCChhheeecCcHHHHHHHHHH--HHHHHHHHHHhcCcCCCcCcCHHHHHHHHHhcCC
Confidence 599999999999 7799998754 5566799999988874
No 33
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=1.1e-37 Score=315.73 Aligned_cols=217 Identities=24% Similarity=0.307 Sum_probs=186.6
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCCCC--------------ccCCC----------CCCCCCCCCchhhhHhhhcc----CC
Q psy15698 215 SGVKVAVFDTGLSSGHTGFNNVAER--------------TDWTN----------ENTLEDKLGHGTFVAGLIAS----SQ 266 (577)
Q Consensus 215 ~gV~VaViDtGid~~Hpdl~~~~~~--------------~~~~~----------~~~~~D~~gHGT~VAGiIag----~~ 266 (577)
+||+|||||+||+++||+|.+.... ..+.. .....|..+|||||||+|++ ..
T Consensus 2 ~~v~V~iiDtGid~~h~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~HGT~va~ii~~~~~~~~ 81 (259)
T cd07473 2 GDVVVAVIDTGVDYNHPDLKDNMWVNPGEIPGNGIDDDGNGYVDDIYGWNFVNNDNDPMDDNGHGTHVAGIIGAVGNNGI 81 (259)
T ss_pred CCCEEEEEeCCCCCCChhhccccccCcccccccCcccCCCCcccCCCcccccCCCCCCCCCCCcHHHHHHHHHCcCCCCC
Confidence 6899999999999999999953211 11111 12356778999999999998 23
Q ss_pred CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCC
Q psy15698 267 RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGP 346 (577)
Q Consensus 267 ~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~ 346 (577)
++.|+||+|+|+.+|+++..+.+....++++++++++.+++|||+|||.... ...+.+++.++.++|+++|+||||+|.
T Consensus 82 ~~~GvAp~a~l~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~vin~S~G~~~~-~~~~~~~~~~~~~~g~ivV~aaGN~g~ 160 (259)
T cd07473 82 GIAGVAWNVKIMPLKFLGADGSGTTSDAIKAIDYAVDMGAKIINNSWGGGGP-SQALRDAIARAIDAGILFVAAAGNDGT 160 (259)
T ss_pred ceEEeCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC-CHHHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 4689999999999999998887888999999999999999999999998865 688999999999999999999999987
Q ss_pred CC-CCCCCCCC--CCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccc
Q psy15698 347 LY-GTLNNPAD--QMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQ 413 (577)
Q Consensus 347 ~~-~~~~~Pa~--~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P 413 (577)
.. ....+|+. .+++|+||+++..+.+..||++|+. ++|+.|||.++++ +|||+|||
T Consensus 161 ~~~~~~~~p~~~~~~~vi~Vga~~~~~~~~~~s~~g~~-----------~~~~~apG~~~~~~~~~~~~~~~~GTS~AaP 229 (259)
T cd07473 161 NNDKTPTYPASYDLDNIISVAATDSNDALASFSNYGKK-----------TVDLAAPGVDILSTSPGGGYGYMSGTSMATP 229 (259)
T ss_pred CCCCCcCcCcccCCCCeEEEEecCCCCCcCcccCCCCC-----------CcEEEeccCCeEeccCCCcEEEeccHhHHHH
Confidence 42 23356764 5789999999999999999999965 3899999999874 79999999
Q ss_pred cCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 414 YMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 414 ~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
+|+| ++||+++.+|.+++.+|++.|..||+
T Consensus 230 ~vaG--~~All~~~~~~~t~~~v~~~L~~tA~ 259 (259)
T cd07473 230 HVAG--AAALLLSLNPNLTAAQIKDAILSSAD 259 (259)
T ss_pred HHHH--HHHHHHHhCCCCCHHHHHHHHHHhCC
Confidence 9999 77999999999999999999998874
No 34
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=2.7e-37 Score=306.30 Aligned_cols=204 Identities=22% Similarity=0.245 Sum_probs=174.6
Q ss_pred CcEEEEEcCCCCCCCCCCCCCCCC-ccC------CCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEEecCCCC
Q psy15698 216 GVKVAVFDTGLSSGHTGFNNVAER-TDW------TNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTNQQV 288 (577)
Q Consensus 216 gV~VaViDtGid~~Hpdl~~~~~~-~~~------~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv~~~~g~ 288 (577)
||+|||||+||+.+||+|.+.... ..+ .......|..||||||||+|++ .+|+++|+.+|+++..+.
T Consensus 1 gV~VaViDsGi~~~h~~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~------~~p~~~i~~~~v~~~~~~ 74 (222)
T cd07492 1 GVRVAVIDSGVDTDHPDLGNLALDGEVTIDLEIIVVSAEGGDKDGHGTACAGIIKK------YAPEAEIGSIKILGEDGR 74 (222)
T ss_pred CCEEEEEeCCCCCCChhhhccccccccccccccccCCCCCCCCCCcHHHHHHHHHc------cCCCCeEEEEEEeCCCCC
Confidence 799999999999999999964432 322 2344567888999999999965 579999999999998887
Q ss_pred CchHHHHHHHHHHHHCCCcEEEeCCCCCCC-CCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeec
Q psy15698 289 SYTSWFLDAFNYAILKKMDVLNLSIGGPDF-MDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGIN 367 (577)
Q Consensus 289 ~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~-~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~ 367 (577)
+..+.+++|++|+++++++|||||||.... ....+.+++.++.++|+++|+||||++... .+|+..++||+||+.+
T Consensus 75 ~~~~~~~~ai~~a~~~~v~Vin~S~G~~~~~~~~~~~~~~~~a~~~g~l~V~aagN~~~~~---~~Pa~~~~vi~V~~~~ 151 (222)
T cd07492 75 CNSFVLEKALRACVENDIRIVNLSLGGPGDRDFPLLKELLEYAYKAGGIIVAAAPNNNDIG---TPPASFPNVIGVKSDT 151 (222)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHCCCEEEEECCCCCCCC---CCCccCCceEEEEecC
Confidence 888999999999999999999999998753 236788899999999999999999998642 3499999999999998
Q ss_pred CCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCCCcccHHHHH
Q psy15698 368 FEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTIL 437 (577)
Q Consensus 368 ~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~ 437 (577)
..+..+.| ++ ++|+.|||.+|.+ +|||||||+|+| ++||+++++|.|++.+|+
T Consensus 152 ~~~~~~~~---~~------------~~~~~apg~~i~~~~~~~~~~~~~GTS~Aap~vaG--~~All~~~~p~l~~~~v~ 214 (222)
T cd07492 152 ADDPKSFW---YI------------YVEFSADGVDIIAPAPHGRYLTVSGNSFAAPHVTG--MVALLLSEKPDIDANDLK 214 (222)
T ss_pred CCCCcccc---cC------------CceEEeCCCCeEeecCCCCEEEeccHHHHHHHHHH--HHHHHHHhCCCCCHHHHH
Confidence 77665444 32 3899999999863 799999999999 779999999999999999
Q ss_pred HHHhhcce
Q psy15698 438 NGMGVVGK 445 (577)
Q Consensus 438 ~~l~~ta~ 445 (577)
++|..||+
T Consensus 215 ~~L~~tA~ 222 (222)
T cd07492 215 RLLQRLAV 222 (222)
T ss_pred HHHHHhcC
Confidence 99999885
No 35
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=100.00 E-value=3.6e-37 Score=318.92 Aligned_cols=223 Identities=21% Similarity=0.281 Sum_probs=176.4
Q ss_pred cCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhcc---CCCccccCCCCcEeEEEEecC
Q psy15698 210 LGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIAS---SQRCLGFAPDAELHIFRVFTN 285 (577)
Q Consensus 210 ~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag---~~~~~GvAP~A~l~~~kv~~~ 285 (577)
.+++|+||+|||||+||+.+||+|.+ .....+|.+.....|..+|||||||+|+| +....||||+|+|+.+|++..
T Consensus 3 ~~~tG~gv~VaVlDsGv~~~hp~l~~~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~GvAp~a~i~~~~~~~~ 82 (297)
T cd07480 3 SPFTGAGVRVAVLDTGIDLTHPAFAGRDITTKSFVGGEDVQDGHGHGTHCAGTIFGRDVPGPRYGVARGAEIALIGKVLG 82 (297)
T ss_pred CCCCCCCCEEEEEcCCCCCCChhhcCCcccCcccCCCCCCCCCCCcHHHHHHHHhcccCCCcccccCCCCEEEEEEEEeC
Confidence 46899999999999999999999984 44566777766678889999999999998 234579999999999999988
Q ss_pred CCCCchHHHHHHHHHHHHCCCcEEEeCCCCCC--------CCC----HHHHHHHHHH---------------HcCCcEEE
Q psy15698 286 QQVSYTSWFLDAFNYAILKKMDVLNLSIGGPD--------FMD----FPFVDKVWEL---------------TANRVILI 338 (577)
Q Consensus 286 ~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~--------~~~----~~~~~ai~~a---------------~~~gilvV 338 (577)
.+......++++|+|+++++++|||||||... ... ..+......+ .++|+++|
T Consensus 83 ~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~gvlvV 162 (297)
T cd07480 83 DGGGGDGGILAGIQWAVANGADVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALMTLVAAQAALARGTLIV 162 (297)
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEeccCCCCcccccccCCCCchhHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCceEE
Confidence 77778888999999999999999999999843 111 2233333333 67899999
Q ss_pred EecCCCCCCCCC---CCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------
Q psy15698 339 SAIGNDGPLYGT---LNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG---------- 405 (577)
Q Consensus 339 ~AAGN~g~~~~~---~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s---------- 405 (577)
+||||++..... ...|+..+.+++|++++..+....|++..+ ++..++||+|||.+|.+
T Consensus 163 ~aAGN~g~~~~~~~~~~~~~~~~~~~~V~~V~~~~~~~~~~~~~~--------~~~~~~dv~ApG~~i~s~~~~~~~~~~ 234 (297)
T cd07480 163 AAAGNESQRPAGIPPVGNPAACPSAMGVAAVGALGRTGNFSAVAN--------FSNGEVDIAAPGVDIVSAAPGGGYRSM 234 (297)
T ss_pred EecCCCCCCCCCCCCccCccccccccEEEEECCCCCCCCccccCC--------CCCCceEEEeCCCCeEeecCCCcEEEe
Confidence 999999864322 234455556666777666666666655432 22357999999999864
Q ss_pred CcCCcccccCCccccccccccCCCcccHHHHHHHHhh
Q psy15698 406 PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGV 442 (577)
Q Consensus 406 sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ 442 (577)
+|||||||+|+| ++||+++.+|.+++.++...|..
T Consensus 235 sGTS~AaP~VaG--~aAll~~~~p~~~~~~~~~~l~~ 269 (297)
T cd07480 235 SGTSMATPHVAG--VAALWAEALPKAGGRALAALLQA 269 (297)
T ss_pred CcHHHHHHHHHH--HHHHHHHhCcccCHHHHHHHHHH
Confidence 899999999999 77999999999999999888873
No 36
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases. Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.
Probab=100.00 E-value=1.3e-36 Score=307.50 Aligned_cols=222 Identities=22% Similarity=0.258 Sum_probs=185.4
Q ss_pred CCCCcEEEEEcCCCCCCCCCCCCCCCCccCC---C---CCCCCCCCCchhhhHhhhccC---CCccccCCCCcEeEEEEe
Q psy15698 213 RGSGVKVAVFDTGLSSGHTGFNNVAERTDWT---N---ENTLEDKLGHGTFVAGLIASS---QRCLGFAPDAELHIFRVF 283 (577)
Q Consensus 213 ~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~---~---~~~~~D~~gHGT~VAGiIag~---~~~~GvAP~A~l~~~kv~ 283 (577)
+|+||+|||||+|++.+||+|.+........ . .....|..+|||+|||+|+|. .+..|+||+|+|+.+|++
T Consensus 1 tG~gv~VaiiDsG~~~~h~~l~~~~~~~~~~~~~~~~~~~~~~~~~~HGT~vagiiag~~~~~~~~GiAp~a~i~~~~~~ 80 (267)
T cd04848 1 TGAGVKVGVIDSGIDLSHPEFAGRVSEASYYVAVNDAGYASNGDGDSHGTHVAGVIAAARDGGGMHGVAPDATLYSARAS 80 (267)
T ss_pred CCCceEEEEEeCCCCCCCccccCcccccccccccccccCCCCCCCCChHHHHHHHHhcCcCCCCcccCCcCCEEEEEecc
Confidence 6999999999999999999999643322211 1 134567789999999999983 457899999999999999
Q ss_pred cCCC-CCchHHHHHHHHHHHHCCCcEEEeCCCCCCC--------------CCHHHHHHHHHHHcCCcEEEEecCCCCCCC
Q psy15698 284 TNQQ-VSYTSWFLDAFNYAILKKMDVLNLSIGGPDF--------------MDFPFVDKVWELTANRVILISAIGNDGPLY 348 (577)
Q Consensus 284 ~~~g-~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~--------------~~~~~~~ai~~a~~~gilvV~AAGN~g~~~ 348 (577)
+..+ ......+.++++++++.+++|||||||.... ....+.+.+.++.++|++||+||||++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~iv~aaGN~~~~~ 160 (267)
T cd04848 81 ASAGSTFSDADIAAAYDFLAASGVRIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAANAGGLFVFAAGNDGQAN 160 (267)
T ss_pred CCCCcccchHHHHHHHHHHHhCCCeEEEccCCCCCcccccccchhhhccccchHHHHHHHHHhhCCeEEEEeCCCCCCCC
Confidence 8875 5677889999999999999999999998752 346678888889999999999999998743
Q ss_pred CC-------CCCCCCCCCeEEEeeecCCCCccCC--CCCCCCCCcCCCCCCCccccEEecCCcee------------cCc
Q psy15698 349 GT-------LNNPADQMDVIGVGGINFEDQIAKF--SSRGMTAWELPGGYGRVKPDIVTYGSAVR------------GPS 407 (577)
Q Consensus 349 ~~-------~~~Pa~~~~vI~VGA~~~~~~~a~f--S~~G~~~~~~p~~~g~~kpDi~ApG~~I~------------ssG 407 (577)
.. ..+|+..+++|+||+++.++....| |++|... ...+++|||.+|. .+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~vi~Vga~~~~~~~~~~~~s~~~~~~---------~~~~~~apG~~i~~~~~~~~~~~~~~~G 231 (267)
T cd04848 161 PSLAAAALPYLEPELEGGWIAVVAVDPNGTIASYSYSNRCGVA---------ANWCLAAPGENIYSTDPDGGNGYGRVSG 231 (267)
T ss_pred CccccccccccCccccCCEEEEEEecCCCCcccccccccchhh---------hhheeecCcCceeecccCCCCcccccce
Confidence 22 2357788999999999999999988 9998542 2356888988765 379
Q ss_pred CCcccccCCccccccccccCCCcccHHHHHHHHhhcce
Q psy15698 408 TNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGK 445 (577)
Q Consensus 408 TS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~ 445 (577)
||+|||+|+| ++||+++.+|.+++.+|+++|..||+
T Consensus 232 TS~Aap~vaG--~~Al~~~~~p~l~~~~v~~~l~~tA~ 267 (267)
T cd04848 232 TSFAAPHVSG--AAALLAQKFPWLTADQVRQTLLTTAT 267 (267)
T ss_pred eEchHHHHHH--HHHHHHHHCCCCCHHHHHHHHHhhcC
Confidence 9999999999 77999999999999999999999874
No 37
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification. ; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A ....
Probab=100.00 E-value=1.9e-35 Score=302.00 Aligned_cols=233 Identities=27% Similarity=0.373 Sum_probs=193.1
Q ss_pred EEEEEcCCCCCCCCCCC-C-CCC-----CccCCCC----CCCCCCCCchhhhHhhhccCC-----CccccCCCCcEeEEE
Q psy15698 218 KVAVFDTGLSSGHTGFN-N-VAE-----RTDWTNE----NTLEDKLGHGTFVAGLIASSQ-----RCLGFAPDAELHIFR 281 (577)
Q Consensus 218 ~VaViDtGid~~Hpdl~-~-~~~-----~~~~~~~----~~~~D~~gHGT~VAGiIag~~-----~~~GvAP~A~l~~~k 281 (577)
+|||||+||+.+||+|. + ... .++|... ....|..+|||||||+|++.. +..|+||+|+|+.+|
T Consensus 1 ~V~viDtGid~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HGT~va~ii~~~~~~~~~~~~Gva~~a~l~~~~ 80 (282)
T PF00082_consen 1 KVAVIDTGIDPNHPDFSSGNFIWSKVPGGYNFVDGNPNPSPSDDDNGHGTHVAGIIAGNGGNNGPGINGVAPNAKLYSYK 80 (282)
T ss_dssp EEEEEESBBTTTSTTTTCTTEEEEEEEEEEETTTTBSTTTSSSTSSSHHHHHHHHHHHTTSSSSSSETCSSTTSEEEEEE
T ss_pred CEEEEcCCcCCCChhHccCCcccccccceeeccCCCCCcCccccCCCccchhhhhccccccccccccccccccccccccc
Confidence 69999999999999999 3 221 4555543 346777899999999999853 458999999999999
Q ss_pred EecCCCCCchHHHHHHHHHHH-HCCCcEEEeCCCC--CCC---CCHHHHHHHHHHHcCCcEEEEecCCCCCCCCC-CCCC
Q psy15698 282 VFTNQQVSYTSWFLDAFNYAI-LKKMDVLNLSIGG--PDF---MDFPFVDKVWELTANRVILISAIGNDGPLYGT-LNNP 354 (577)
Q Consensus 282 v~~~~g~~~~~~~~~ai~~a~-~~g~~ViN~S~G~--~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~-~~~P 354 (577)
+++..+ ....++++++++++ +.+++|||||||. ... ....+..+++.+.++|+++|+||||+|..... +.+|
T Consensus 81 i~~~~~-~~~~~~~~ai~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~g~l~v~aaGN~~~~~~~~~~~P 159 (282)
T PF00082_consen 81 IFDNSG-GTSSDLIEAIEYAVKNDGVDVINLSFGSNSGPPDPSYSDILEEAIDYAEKKGILIVFAAGNNGPNDDRNISFP 159 (282)
T ss_dssp CSSTTS-EEHHHHHHHHHHHHHHTTSSEEEECEEBEESSSHSHHHHHHHHHHHHHHHTTEEEEEE--SSSSBTTBTGEBT
T ss_pred cccccc-cccccccchhhhhhhccCCccccccccccccccccccccccccccccccccCcceeecccccccccccccccc
Confidence 988876 77888999999999 8999999999987 221 11234566678889999999999999875443 7799
Q ss_pred CCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCcee-------------cCcCCcccccCCccccc
Q psy15698 355 ADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR-------------GPSTNGECQYMWPYCTQ 421 (577)
Q Consensus 355 a~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~-------------ssGTS~A~P~VaG~a~~ 421 (577)
+..+++|+||+++..+.++.||++|+. ...++.|||++|||.++. .+|||||||+|+| ++
T Consensus 160 a~~~~vi~Vg~~~~~~~~~~~s~~g~~-----~~~~~~~~di~a~G~~i~~~~~~~~~~~~~~~~GTS~Aap~vag--~~ 232 (282)
T PF00082_consen 160 ASSPNVITVGAVDNNGQPASYSNYGGP-----SDDGRIKPDIAAPGGNILSAVPGSDRGSYTSFSGTSFAAPVVAG--AA 232 (282)
T ss_dssp TTSTTSEEEEEEETTSSBSTTSSBSTT-----ETTCTTCEEEEEECSSEEEEETTTESEEEEEEESHHHHHHHHHH--HH
T ss_pred ccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccCcCCchHHHHHH--HH
Confidence 999999999999999999999999843 347889999999999883 3799999999999 77
Q ss_pred cccccCCCcccHHHHHHHHhhcceecC---CCccccCCCC
Q psy15698 422 PLYHGAIPIIVNVTILNGMGVVGKILE---RPKWYPYLPH 458 (577)
Q Consensus 422 aL~~~~~P~l~~~~i~~~l~~ta~~~~---~~~~~p~~~~ 458 (577)
||+++.+|.++..+|+..|..|+.... ...|+..+|+
T Consensus 233 All~~~~p~~~~~~i~~~l~~ta~~~~~~~~~~~~~~~G~ 272 (282)
T PF00082_consen 233 ALLLSKYPNLTPAEIKALLINTADDLGSTNGEGYDNSYGW 272 (282)
T ss_dssp HHHHHHSTTSHHHHHHHHHHHHSBESSETTSSSSHHHHTT
T ss_pred HHHHHHCCCCCHHHHHHHHHHhCcccCcCCCCCCCCCccC
Confidence 999999999999999999999999998 3455555555
No 38
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
Probab=99.97 E-value=1.9e-31 Score=268.73 Aligned_cols=207 Identities=20% Similarity=0.073 Sum_probs=157.0
Q ss_pred EEEcCCCCCCCCCCC-CCCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEEecCCCCCchHHHHHHH
Q psy15698 220 AVFDTGLSSGHTGFN-NVAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAF 298 (577)
Q Consensus 220 aViDtGid~~Hpdl~-~~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai 298 (577)
+++|.+....++.+. ....+..+... ...|.++|||||||||+|.. |++|+++++..++... ..+.+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~HGThVAgiiag~~---~~~p~a~~~~~~~~~~----~~~~~~~~i 76 (247)
T cd07488 5 FLWDKNDSKNAPNTLAAVFIRNNPRFG-RNNTFDDHATLVASIMGGRD---GGLPAVNLYSSAFGIK----SNNGQWQEC 76 (247)
T ss_pred cccccccccCccceeeeeecccccccc-CCCCCCCHHHHHHHHHHhcc---CCCCccceehhhhCCC----CCCccHHHH
Confidence 568888888777654 22223333333 45688899999999999953 5679999987665322 223345677
Q ss_pred HHH--HHCCCcEEEeCCCCCCCCC--------HHHHHHHHHHHcC-CcEEEEecCCCCCCC---CCCCCCCCCCCeEEEe
Q psy15698 299 NYA--ILKKMDVLNLSIGGPDFMD--------FPFVDKVWELTAN-RVILISAIGNDGPLY---GTLNNPADQMDVIGVG 364 (577)
Q Consensus 299 ~~a--~~~g~~ViN~S~G~~~~~~--------~~~~~ai~~a~~~-gilvV~AAGN~g~~~---~~~~~Pa~~~~vI~VG 364 (577)
+|+ .+.+++|||||||++.... ..+..++.++.++ |+++|+||||+|.+. ..+..|+..+++|+||
T Consensus 77 ~~~~~~~~gv~VINmS~G~~~~~~~~~~~~~~~~l~~aid~~a~~~GvlvV~AAGN~g~~~~~~~~i~~pa~~~nvItVG 156 (247)
T cd07488 77 LEAQQNGNNVKIINHSYGEGLKRDPRAVLYGYALLSLYLDWLSRNYEVINVFSAGNQGKEKEKFGGISIPTLAYNSIVVG 156 (247)
T ss_pred HHHHHhcCCceEEEeCCccCCCCCccccccccchHHHHHHHHHhhCCEEEEEecCCCCCCccCCCCcCCccccCCeEEEE
Confidence 777 6789999999999864322 2466777777766 999999999999743 4567899999999999
Q ss_pred eecCCCCcc---CCCCCCCCCCcCCCCCCCccccEEecCCceec--------CcCCcccccCCccccccccccCCCcccH
Q psy15698 365 GINFEDQIA---KFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG--------PSTNGECQYMWPYCTQPLYHGAIPIIVN 433 (577)
Q Consensus 365 A~~~~~~~a---~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s--------sGTS~A~P~VaG~a~~aL~~~~~P~l~~ 433 (577)
|++..++++ .||+++.. |..+++.||||+|||++|.+ +|||||+|+|+| ++||+++.+|.+..
T Consensus 157 A~d~~g~~~~~s~~sn~~~~----~~~~~~~~~di~APG~~i~s~~~~~~~~sGTSmAaP~VaG--~aAlll~~~p~~~~ 230 (247)
T cd07488 157 STDRNGDRFFASDVSNAGSE----INSYGRRKVLIVAPGSNYNLPDGKDDFVSGTSFSAPLVTG--IIALLLEFYDRQYK 230 (247)
T ss_pred EecCCCCcceecccccccCC----CCCCCCceeEEEEeeeeEECCCCceeeecccchHHHHHHH--HHHHHHHHChhhhh
Confidence 999999865 45666533 55678899999999999975 899999999999 78999999999885
Q ss_pred HHHHHHH
Q psy15698 434 VTILNGM 440 (577)
Q Consensus 434 ~~i~~~l 440 (577)
..+-+++
T Consensus 231 ~~~~~~~ 237 (247)
T cd07488 231 KGNNNLI 237 (247)
T ss_pred CcchhHH
Confidence 5544433
No 39
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav
Probab=99.97 E-value=2.6e-30 Score=255.06 Aligned_cols=213 Identities=30% Similarity=0.394 Sum_probs=178.5
Q ss_pred cEEEEEcCCCCCCCCCC----CCCCCCccCCCC----CCCCCCCCchhhhHhhhccC---CCccccCCCCcEeEEEEecC
Q psy15698 217 VKVAVFDTGLSSGHTGF----NNVAERTDWTNE----NTLEDKLGHGTFVAGLIASS---QRCLGFAPDAELHIFRVFTN 285 (577)
Q Consensus 217 V~VaViDtGid~~Hpdl----~~~~~~~~~~~~----~~~~D~~gHGT~VAGiIag~---~~~~GvAP~A~l~~~kv~~~ 285 (577)
|+|+|||+|++.+|++| .......++... ....+..+|||+||++|++. ....|+||+++|+.+|+...
T Consensus 1 v~VaiiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HGt~va~~i~~~~~~~~~~g~a~~a~i~~~~~~~~ 80 (241)
T cd00306 1 VTVAVIDTGVDPDHPDLDGLFGGGDGGNDDDDNENGPTDPDDGNGHGTHVAGIIAASANNGGGVGVAPGAKLIPVKVLDG 80 (241)
T ss_pred CEEEEEeCCCCCCCcchhccccCcccccccccCcCCCCCCCCCCCcHHHHHHHHhcCCCCCCCEEeCCCCEEEEEEEecC
Confidence 68999999999999975 222233333322 13466789999999999983 23379999999999999998
Q ss_pred CCCCchHHHHHHHHHHH-HCCCcEEEeCCCCCCCC-CHHHHHHHHHHHcC-CcEEEEecCCCCCCCCC-CCCCCCCCCeE
Q psy15698 286 QQVSYTSWFLDAFNYAI-LKKMDVLNLSIGGPDFM-DFPFVDKVWELTAN-RVILISAIGNDGPLYGT-LNNPADQMDVI 361 (577)
Q Consensus 286 ~g~~~~~~~~~ai~~a~-~~g~~ViN~S~G~~~~~-~~~~~~ai~~a~~~-gilvV~AAGN~g~~~~~-~~~Pa~~~~vI 361 (577)
.+......+++++++++ ..+++|||||||..... ...+.+.+.++.++ |+++|+|+||++..... +..|+..+++|
T Consensus 81 ~~~~~~~~~~~ai~~~~~~~~~~iin~S~g~~~~~~~~~~~~~~~~~~~~~~~i~V~aaGN~~~~~~~~~~~p~~~~~vi 160 (241)
T cd00306 81 DGSGSSSDIAAAIDYAAADQGADVINLSLGGPGSPPSSALSEAIDYALAKLGVLVVAAAGNDGPDGGTNIGYPAASPNVI 160 (241)
T ss_pred CCCcCHHHHHHHHHHHHhccCCCEEEeCCCCCCCCCCHHHHHHHHHHHHhcCeEEEEecCCCCCCCCCCccCCccCCceE
Confidence 87777889999999999 89999999999987532 46788889988888 99999999999974321 46899999999
Q ss_pred EEeeecCCCCcc-CCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcccccCCccccccccccCC
Q psy15698 362 GVGGINFEDQIA-KFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYHGAI 428 (577)
Q Consensus 362 ~VGA~~~~~~~a-~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~~~~ 428 (577)
+||+++..+... .++++|+. +|+.+||.++.. +|||+|||+|+| .+||+++.+
T Consensus 161 ~Vga~~~~~~~~~~~~~~~~~------------~~~~apg~~~~~~~~~~~~~~~~~~GTS~Aap~vaG--~~Al~~~~~ 226 (241)
T cd00306 161 AVGAVDRDGTPASPSSNGGAG------------VDIAAPGGDILSSPTTGGGGYATLSGTSMAAPIVAG--VAALLLSAN 226 (241)
T ss_pred EEEecCcCCCccCCcCCCCCC------------ceEEeCcCCccCcccCCCCCeEeeccHHHHHHHHHH--HHHHHHHHC
Confidence 999999999888 88888754 999999998753 699999999999 779999999
Q ss_pred CcccHHHHHHHHhhc
Q psy15698 429 PIIVNVTILNGMGVV 443 (577)
Q Consensus 429 P~l~~~~i~~~l~~t 443 (577)
|.+++.+++..|..+
T Consensus 227 ~~~~~~~~~~~l~~t 241 (241)
T cd00306 227 PDLTPAQVKAALLST 241 (241)
T ss_pred CCCCHHHHHHHHhhC
Confidence 999999999998754
No 40
>KOG1114|consensus
Probab=99.96 E-value=2.2e-28 Score=268.68 Aligned_cols=206 Identities=22% Similarity=0.278 Sum_probs=166.3
Q ss_pred CchhhhHhhhcc----CCCccccCCCCcEeEEEEecCCCC--CchHHHHHHHHHHHHCCCcEEEeCCCCCCCC--CHHHH
Q psy15698 253 GHGTFVAGLIAS----SQRCLGFAPDAELHIFRVFTNQQV--SYTSWFLDAFNYAILKKMDVLNLSIGGPDFM--DFPFV 324 (577)
Q Consensus 253 gHGT~VAGiIag----~~~~~GvAP~A~l~~~kv~~~~g~--~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~--~~~~~ 324 (577)
.||||||||++| .....|+||+|+|+++++.+..-. .+...+.+|+..++++++||||||||-+..+ ...+.
T Consensus 311 ~HGTHVAgIa~anhpe~p~~NGvAPgaqIvSl~IGD~RLgsMETgtaltRA~~~v~e~~vDiINmSyGE~a~~pn~GRvi 390 (1304)
T KOG1114|consen 311 PHGTHVAGIAAANHPETPELNGVAPGAQIVSLKIGDGRLGSMETGTALTRAMIEVIEHNVDIINMSYGEDAHLPNSGRVI 390 (1304)
T ss_pred CCcceehhhhccCCCCCccccCCCCCCEEEEEEecCccccccccchHHHHHHHHHHHhcCCEEEeccCccCCCCCcchHH
Confidence 499999999999 336789999999999999876432 2334788999999999999999999976433 34577
Q ss_pred HHHHHHH-cCCcEEEEecCCCCCCCCCCCCCCC-CCCeEEEeeecC--------------CCCccCCCCCCCCCCcCCCC
Q psy15698 325 DKVWELT-ANRVILISAIGNDGPLYGTLNNPAD-QMDVIGVGGINF--------------EDQIAKFSSRGMTAWELPGG 388 (577)
Q Consensus 325 ~ai~~a~-~~gilvV~AAGN~g~~~~~~~~Pa~-~~~vI~VGA~~~--------------~~~~a~fS~~G~~~~~~p~~ 388 (577)
+.+.++. ++|+++|+||||.|+...++..|+. ...||+|||.-. .++...+|||||+.
T Consensus 391 El~~e~vnKr~vI~VsSAGN~GPaltTVGaPggtTssvIgVGAYVsp~mm~a~y~~~e~vp~~~YtWsSRgP~~------ 464 (1304)
T KOG1114|consen 391 ELLRELVNKRGVIYVSSAGNNGPALTTVGAPGGTTSSVIGVGAYVSPGMMQAEYSVREPVPSNPYTWSSRGPCL------ 464 (1304)
T ss_pred HHHHHHhhhccEEEEEeCCCCCCceeeccCCCCcccceEeeeeecCHHHHHhhhhhhccCCCCccccccCCCCc------
Confidence 7777766 5699999999999998889988875 468999999763 34577899999764
Q ss_pred CCCccccEEecCCceec------------CcCCcccccCCccccccccccCC----CcccHHHHHHHHhhcceecCCCcc
Q psy15698 389 YGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYHGAI----PIIVNVTILNGMGVVGKILERPKW 452 (577)
Q Consensus 389 ~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~~~~----P~l~~~~i~~~l~~ta~~~~~~~~ 452 (577)
+|-..+.|+|||+.|.+ .|||||+|.++| +.||++++. -..++..|+.+|..||+.++.-
T Consensus 465 DG~lGVsi~APggAiAsVP~~tlq~~qLMNGTSMsSP~acG--~IAllLSgLKa~ni~ytpysVrrAlenTa~~l~~i-- 540 (1304)
T KOG1114|consen 465 DGDLGVSISAPGGAIASVPQYTLQNSQLMNGTSMSSPSACG--AIALLLSGLKAQNIPYTPYSVRRALENTATKLGDI-- 540 (1304)
T ss_pred CCCcceEEecCCccccCCchhhhhhhhhhCCcccCCccccc--hHHHHHHHHHhcCCCCcHHHHHHHHHhcccccCcc--
Confidence 88999999999999975 799999999999 778877754 6699999999999999999854
Q ss_pred ccCCCCCCccceeeccc
Q psy15698 453 YPYLPHNGEFLEVSIRG 469 (577)
Q Consensus 453 ~p~~~~~g~~l~~~~~~ 469 (577)
+++. .+.++|+|.-+|
T Consensus 541 d~fa-qG~GmlqVdkAy 556 (1304)
T KOG1114|consen 541 DSFA-QGQGMLQVDKAY 556 (1304)
T ss_pred chhc-cCcceeehhHHH
Confidence 4433 334455554433
No 41
>KOG3526|consensus
Probab=99.92 E-value=1e-24 Score=220.52 Aligned_cols=300 Identities=18% Similarity=0.155 Sum_probs=202.2
Q ss_pred HHHHhcCCCeEEEecCeEEEcccCccccccCCCCCCCCCCCCcccccccccccccccccccccccccccccccccccccc
Q psy15698 114 LSSLLEHPLIKRVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKT 193 (577)
Q Consensus 114 ~~~L~~~p~V~~Vep~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~ 193 (577)
-.+|.++|.|+-++.+.-+.+...-.. +-...-...+||.|..||. ++++......
T Consensus 88 ~~~l~~dp~v~~a~qq~gf~r~krgyr---p~~~fd~~~~dplf~~qwy----lkntgqaggk----------------- 143 (629)
T KOG3526|consen 88 HAKLHNDPEVKMALQQEGFDRKKRGYR---PINEFDINMNDPLFTKQWY----LKNTGQAGGK----------------- 143 (629)
T ss_pred hhhhccChhHhhhhhccccchhhccCC---chhhhccccCCcccceeee----eecccccCCc-----------------
Confidence 458999999999888776655432111 0011122458999999994 3333222211
Q ss_pred CcchhhhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCC---CCCCCccCCCCCC-----CCC--CCCchhhhHhhhc
Q psy15698 194 VPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFN---NVAERTDWTNENT-----LED--KLGHGTFVAGLIA 263 (577)
Q Consensus 194 ~p~~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~---~~~~~~~~~~~~~-----~~D--~~gHGT~VAGiIa 263 (577)
..-.+++.++|.+|++|++|++||+|.|||+-||||+ +....++|..+++ ..| .+.|||.|||-++
T Consensus 144 ----~rldlnv~~awa~g~tgknvttaimddgvdymhpdlk~nynaeasydfssndpfpyprytddwfnshgtrcagev~ 219 (629)
T KOG3526|consen 144 ----PRLDLNVAEAWALGYTGKNVTTAIMDDGVDYMHPDLKSNYNAEASYDFSSNDPFPYPRYTDDWFNSHGTRCAGEVV 219 (629)
T ss_pred ----ccccccHHHHHhhcccCCCceEEeecCCchhcCcchhcccCceeecccccCCCCCCCcccchhhhccCccccceee
Confidence 0125799999999999999999999999999999999 3445677765432 112 3689999999987
Q ss_pred c----CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH-CCCcEEEeCCCCCCC------CCHHHHHHHHHHH-
Q psy15698 264 S----SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL-KKMDVLNLSIGGPDF------MDFPFVDKVWELT- 331 (577)
Q Consensus 264 g----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~-~g~~ViN~S~G~~~~------~~~~~~~ai~~a~- 331 (577)
+ +....|||.+.++..+|+++.. +..++++|-..--+ ..++|.+.|||..+. ......+++..-.
T Consensus 220 aardngicgvgvaydskvagirmldqp---ymtdlieansmghep~kihiysaswgptddgktvdgprnatmraiv~gvn 296 (629)
T KOG3526|consen 220 AARDNGICGVGVAYDSKVAGIRMLDQP---YMTDLIEANSMGHEPSKIHIYSASWGPTDDGKTVDGPRNATMRAIVRGVN 296 (629)
T ss_pred eeccCCceeeeeeeccccceeeecCCc---hhhhhhhhcccCCCCceEEEEecccCcCCCCcccCCchhHHHHHHHHhhh
Confidence 7 4456789999999999999863 55666664322211 368999999997642 1223344444333
Q ss_pred ----cCCcEEEEecCCCCC-CCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEe-----cCC
Q psy15698 332 ----ANRVILISAIGNDGP-LYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVT-----YGS 401 (577)
Q Consensus 332 ----~~gilvV~AAGN~g~-~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~A-----pG~ 401 (577)
..|.|+|+|+|..|. +.++....+.+...|++-+.-.+++-+-|-..++.+....-..|...|.--. +|.
T Consensus 297 egrnglgsiyvwasgdgge~ddcncdgyaasmwtisinsaindg~nahydescsstlastfsng~rnpetgvattdlyg~ 376 (629)
T KOG3526|consen 297 EGRNGLGSIYVWASGDGGEDDDCNCDGYAASMWTISINSAINDGENAHYDESCSSTLASTFSNGGRNPETGVATTDLYGR 376 (629)
T ss_pred cccCCcccEEEEecCCCCCccccCCccchhheEEEEeehhhcCCccccccchhhHHHHHHhhcCCcCCCcceeeeccccc
Confidence 258999999999987 3455667788889999988777776554433333222211112222232211 232
Q ss_pred cee-cCcCCcccccCCccccccccccCCCcccHHHHHHHHhhccee
Q psy15698 402 AVR-GPSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKI 446 (577)
Q Consensus 402 ~I~-ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~ 446 (577)
-.. .||||.|+|-.+| +.||.+.++|.|+..++......|..-
T Consensus 377 ct~~hsgtsaaapeaag--vfalaleanp~ltwrd~qhltvltskr 420 (629)
T KOG3526|consen 377 CTRSHSGTSAAAPEAAG--VFALALEANPSLTWRDLQHLTVLTSKR 420 (629)
T ss_pred eecccCCccccCccccc--eeeeeeccCCCcchhhhhheeeeeccc
Confidence 222 3999999999999 889999999999999998887777653
No 42
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=1e-23 Score=229.57 Aligned_cols=234 Identities=29% Similarity=0.386 Sum_probs=197.7
Q ss_pred ccCchHHHhc--CCCCCCcEEEEEcCCCCCCCCCCCCCCC-CccCCCCCC---CCCCCCchhhhHhhhcc-----CCCcc
Q psy15698 201 ILQANTLWDL--GIRGSGVKVAVFDTGLSSGHTGFNNVAE-RTDWTNENT---LEDKLGHGTFVAGLIAS-----SQRCL 269 (577)
Q Consensus 201 ~i~~~~~w~~--g~~G~gV~VaViDtGid~~Hpdl~~~~~-~~~~~~~~~---~~D~~gHGT~VAGiIag-----~~~~~ 269 (577)
.+.....|.. +++|+||+|+|||+||+..||+|..... ..+|..... ..|..+|||||+|+|++ .....
T Consensus 126 ~~~~~~~~~~~~~~~g~gv~~~vid~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~hGt~vag~ia~~~~~~~~~~~ 205 (508)
T COG1404 126 AISVGALVANGAGLTGKGVTVAVIDTGVDASHPDLAGSAVAGGDFVDGDPEPPFLDDNGHGTHVAGTIAAVIFDNGAGVA 205 (508)
T ss_pred hcccccccccccCCCCCCeEEEEeccCCCCCChhhhcccccccccccCCCCCCCCCCCCCcceeeeeeeeecccCCCccc
Confidence 4566677776 8999999999999999999999985433 246655443 46888999999999998 24588
Q ss_pred ccCCCCcEeEEEEecCC-CCCchHHHHHHHHHHHHCC--CcEEEeCCCCC--CCCCHHHHHHHHHHHcCC-cEEEEecCC
Q psy15698 270 GFAPDAELHIFRVFTNQ-QVSYTSWFLDAFNYAILKK--MDVLNLSIGGP--DFMDFPFVDKVWELTANR-VILISAIGN 343 (577)
Q Consensus 270 GvAP~A~l~~~kv~~~~-g~~~~~~~~~ai~~a~~~g--~~ViN~S~G~~--~~~~~~~~~ai~~a~~~g-ilvV~AAGN 343 (577)
|++|+++++.++++... +....+.+++++.++++.+ +++||||+|.. ......+..++.++...| +++|+|+||
T Consensus 206 g~a~~~~~~~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~in~s~g~~~~~~~~~~~~~a~~~~~~~g~v~~v~aagn 285 (508)
T COG1404 206 GVAPGAKLLLVKVLGSGGGSGELSDVAEGIEGAANLGGPADVINLSLGGSLSDSASPALGDALAAAANAGGVVIVAAAGN 285 (508)
T ss_pred cccCCCcEEEEEeccCCCCcccHHHHHHHHHHHHhcCCCCcEEEecCCCCccccccHHHHHHHHHHHHcCCEEEEEeccc
Confidence 99999999999999976 7788888899999999998 99999999975 223567888888887777 999999999
Q ss_pred CCCCCC--CCCCCCCCC--CeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCcee---------------
Q psy15698 344 DGPLYG--TLNNPADQM--DVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR--------------- 404 (577)
Q Consensus 344 ~g~~~~--~~~~Pa~~~--~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~--------------- 404 (577)
.+.+.. ...+|+.+. .+|+||+++..+..+.||++|.. ..+++++||.++.
T Consensus 286 ~~~~~~~~~~~~p~~~~~~~~i~v~a~~~~~~~~~~s~~g~~----------~~~~~~apg~~i~~~~~~~~~~~~~~~~ 355 (508)
T COG1404 286 DGSNASGGDLAYPASYPAPNVIAVGALDLSDTVASFSNDGSP----------TGVDIAAPGVNILSLSAVNTLPGDGADY 355 (508)
T ss_pred CCCCCccccccCCcccCCCceEEEecCCCCCccccccccCCC----------CCcceeCCCccccccccceeeeCCccce
Confidence 997542 567888888 99999999999999999999963 2378888888854
Q ss_pred --cCcCCcccccCCccccccccccCCC-cccHHHHHHHHhhccee
Q psy15698 405 --GPSTNGECQYMWPYCTQPLYHGAIP-IIVNVTILNGMGVVGKI 446 (577)
Q Consensus 405 --ssGTS~A~P~VaG~a~~aL~~~~~P-~l~~~~i~~~l~~ta~~ 446 (577)
.+||||++|+++| .++|+.+.+| .+++.++++.+..++..
T Consensus 356 ~~~~Gts~a~p~v~g--~aal~~~~~~~~~~~~~~~~~~~~~~~~ 398 (508)
T COG1404 356 VTLSGTSMAAPHVSG--VAALVLSANPNELTPAQVRNLIVTTAGL 398 (508)
T ss_pred EeeccccccccHHHH--HHHHHHccCcccCCHHHHHHHHhhcccc
Confidence 3799999999999 7899999999 89999999998877764
No 43
>cd04056 Peptidases_S53 Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-
Probab=99.73 E-value=5.1e-17 Score=172.92 Aligned_cols=223 Identities=20% Similarity=0.224 Sum_probs=145.7
Q ss_pred cchhhhccCchHHHhcCCCCCCcEEEEEcCCCCC-CCCCCCCCC------CCccCC----CCCC-CCCCCCchhhhHhhh
Q psy15698 195 PRQITSILQANTLWDLGIRGSGVKVAVFDTGLSS-GHTGFNNVA------ERTDWT----NENT-LEDKLGHGTFVAGLI 262 (577)
Q Consensus 195 p~~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~-~Hpdl~~~~------~~~~~~----~~~~-~~D~~gHGT~VAGiI 262 (577)
|..+.+..+++.+ +.+|+|.+|||++-+-.. ...|+.... ...... .... ..+..+.+-...=-
T Consensus 4 p~~l~~~Y~~~~~---~~~g~g~ti~i~~~~~~~~~~~dl~~f~~~~g~~~~~~~~v~~~~~~~~~~~~~~~~~E~~LD- 79 (361)
T cd04056 4 PADLAALYNIPPL---GYTGSGQTIGIIEFGGGYYNPSDLQTFFQLFGLPAPTVFIVVVIGGGNAPGTSSGWGGEASLD- 79 (361)
T ss_pred HHHHHHHcCCCCC---CCCCCCCEEEEEeccCcccCHHHHHHHHHhhCCCCCCccEEEEecCCccCCCCCCCCcchhhh-
Confidence 3344455566555 678999999999988663 334433100 000000 0000 00111111000000
Q ss_pred ccCCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHC---CCcEEEeCCCCCCCC-----CHHHHHHHHHHHcCC
Q psy15698 263 ASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILK---KMDVLNLSIGGPDFM-----DFPFVDKVWELTANR 334 (577)
Q Consensus 263 ag~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~---g~~ViN~S~G~~~~~-----~~~~~~ai~~a~~~g 334 (577)
-....||||+|+|+.+++.+.. ...++.++.+++.. +++|||+|||..... ...+.+++.+|.++|
T Consensus 80 --v~~~~gvAP~a~i~~~~~~~~~----~~~~~~a~~~ai~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~G 153 (361)
T cd04056 80 --VEYAGAIAPGANITLYFAPGTV----TNGPLLAFLAAVLDNPNLPSVISISYGEPEQSLPPAYAQRVCNLFAQAAAQG 153 (361)
T ss_pred --HHHHHhccCCCeEEEEEECCcC----ccHHHHHHHHHHHcCCCCCCEEEccCCccccccCHHHHHHHHHHHHHHHhCC
Confidence 1124889999999999998764 34467788888877 999999999987532 256778888899999
Q ss_pred cEEEEecCCCCCCCC---------CCCCCCCCCCeEEEeeecCCCCcc--------------------CCCCCCCC-CC-
Q psy15698 335 VILISAIGNDGPLYG---------TLNNPADQMDVIGVGGINFEDQIA--------------------KFSSRGMT-AW- 383 (577)
Q Consensus 335 ilvV~AAGN~g~~~~---------~~~~Pa~~~~vI~VGA~~~~~~~a--------------------~fS~~G~~-~~- 383 (577)
|+||+|+||+|...+ .+.+|+..++|++||+++...... .||++=+. .|
T Consensus 154 itvvaAsGd~G~~~~~~~~~~~~~~~~~Pas~P~V~sVGgt~~~~~~~~~~~~~~~~~~~~~~~~SGGG~S~~f~~P~yQ 233 (361)
T cd04056 154 ITVLAASGDSGAGGCGGDGSGTGFSVSFPASSPYVTAVGGTTLYTGGTGSSAESTVWSSEGGWGGSGGGFSNYFPRPSYQ 233 (361)
T ss_pred eEEEEeCCCCCCCCCCCCCCCCcccCCCCCCCCceeeeecccccCCCcccccccccccccCCcccccCCcCCCCCCChhh
Confidence 999999999997542 456899999999999999544322 23332111 11
Q ss_pred ----------cCCCCCCCccccEEec---CCcee---------cCcCCcccccCCccccccccccCCC
Q psy15698 384 ----------ELPGGYGRVKPDIVTY---GSAVR---------GPSTNGECQYMWPYCTQPLYHGAIP 429 (577)
Q Consensus 384 ----------~~p~~~g~~kpDi~Ap---G~~I~---------ssGTS~A~P~VaG~a~~aL~~~~~P 429 (577)
......||..|||++. +.+.. ..|||+|||++|| ..||+.+...
T Consensus 234 ~~~~~~~~~~~~~~~~gR~~PDVaa~a~~~~g~~i~~~g~~~~~gGTS~aaP~~Ag--~~Al~n~~~~ 299 (361)
T cd04056 234 SGAVLGLPPSGLYNGSGRGVPDVAANADPGTGYLVVVNGQWYLVGGTSAAAPLFAG--LIALINQARL 299 (361)
T ss_pred hhcccCCCCCCCCCCCCCcCCeeecccCCCCCEEEEECCeEEeeCCccHHHHHHHH--HHHHHHHHhh
Confidence 1234578999999988 34332 4899999999999 7788887664
No 44
>KOG3525|consensus
Probab=98.53 E-value=4.7e-07 Score=98.26 Aligned_cols=279 Identities=16% Similarity=0.130 Sum_probs=172.4
Q ss_pred ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC---CCCCccCCCCC-------CCCCCCCchhhhHhhhccC----C
Q psy15698 201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN---VAERTDWTNEN-------TLEDKLGHGTFVAGLIASS----Q 266 (577)
Q Consensus 201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~---~~~~~~~~~~~-------~~~D~~gHGT~VAGiIag~----~ 266 (577)
.+++..+|..+++|.++.|+|+|+|+...|+++.. ....+++.... +......|||-||+-+++. .
T Consensus 19 d~~v~~~~~~~~~g~~~~~~i~ddgl~~~h~~~~~~~~~~~s~d~~~~~~~p~~~~~~~~~~~~g~~Ca~~~a~~~~~~~ 98 (431)
T KOG3525|consen 19 DLNVQNAWCKGYTGTRVSVTILDDGLECSHPDLRNNYDPLGSYDVNRHDNDPEPRCDGTNENKHGTRCAGCVAARANNLT 98 (431)
T ss_pred cceeeeccccCCCCCceEEEEeeccccccCcccccccCcceeEeeecCCCCcccccCCCCccccCCCCCcccccccCCCc
Confidence 57899999999999999999999999999999984 23333333221 1223478999999999883 3
Q ss_pred CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHH-HCCCcEEEeCCCCCCC------CCHHHHHHHHHH-----HcCC
Q psy15698 267 RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI-LKKMDVLNLSIGGPDF------MDFPFVDKVWEL-----TANR 334 (577)
Q Consensus 267 ~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~-~~g~~ViN~S~G~~~~------~~~~~~~ai~~a-----~~~g 334 (577)
-..|+++++++..++++...-. +...+..... ...+++...|||..+- .......++..+ ..+|
T Consensus 99 C~vg~~~~~~~~g~~~l~~~v~----~~~~~~~~~~~~~~~di~scsw~pddd~~t~~~~~~l~~~~~~~~~~~g~~~~g 174 (431)
T KOG3525|consen 99 CGVGVAYNATIGGIRMLAGCVS----DAVEAPSLGFGPCHIDIYSCSWGPDDDGKTCDGPGTLAREALVYGRGCGRHGKG 174 (431)
T ss_pred CCCCcccCccccceeeeeeecc----cceecccccCCCCCceeecCcCCcccCCCcCCCCcchhhhhhhccccccccCCC
Confidence 4689999999999998775321 1111111111 2358999999996431 112233333332 3579
Q ss_pred cEEEEecCCCCCCCCCC--CCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcC-CCCCCCccccEEecCCc----eecCc
Q psy15698 335 VILISAIGNDGPLYGTL--NNPADQMDVIGVGGINFEDQIAKFSSRGMTAWEL-PGGYGRVKPDIVTYGSA----VRGPS 407 (577)
Q Consensus 335 ilvV~AAGN~g~~~~~~--~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~-p~~~g~~kpDi~ApG~~----I~ssG 407 (577)
.++|+|.||.|...+.. ..-......++.+.++..+....|+-........ .+..+...--+..-+.. ---.|
T Consensus 175 s~~v~as~ngg~~~d~c~c~~y~~~i~t~~~~~~~~~~~~p~y~~~C~~~~~s~~s~~~~~~~~~~~~~~~~~c~e~h~g 254 (431)
T KOG3525|consen 175 SIFVWASGNGGTCGDSCHCDGYTNSIYTLSISCATQCGKKPQYRERCASCLASTYSSGGPTEECIVCTDPRHSCTEGHTG 254 (431)
T ss_pred CeeEEEecCccccccccccccccCcceecccccccccCCCccccccccccccccccCCCCcceeeeecCCCccccccCCC
Confidence 99999999998743322 2333445566666776655544333332221110 00000000011111111 01279
Q ss_pred CCcccccCCccccccccccCCCcccHHHHHHHHhhcceec--CCCccccCCCCCCccceeecccCCccccccccccccce
Q psy15698 408 TNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKIL--ERPKWYPYLPHNGEFLEVSIRGSGVKVAVFDTGLSSGH 485 (577)
Q Consensus 408 TS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~--~~~~~~p~~~~~g~~l~~~~~~~~~~~~~~~~g~~~g~ 485 (577)
||.++|+.++ ..++...++|.++...+......++... ....|. .+.-+..+...+++..+.+..+ +..+.+.
T Consensus 255 ~s~~~~~~a~--~~~~~~~~~~~ls~~d~~~l~~~~~~~~~~~~~~~~--~n~~g~~~~h~~g~~~~~~~~~-~~~~~~~ 329 (431)
T KOG3525|consen 255 TSASAPLAAG--IIALALEANPCLSWRDSQHLIVLTSRPKVLLKGKWK--SNGAGGLVSHLYGFGLLDAKAL-VSCAKTW 329 (431)
T ss_pred CcCccchhcc--hhhhhhccCccccccchhhhhhhhcchhhccCCCce--EecCCceeeeeecccccCcchh-hhhhccC
Confidence 9999999999 7799999999999988877666665432 223444 2445677777888877766666 5555544
Q ss_pred eeE
Q psy15698 486 TGF 488 (577)
Q Consensus 486 ~~~ 488 (577)
..+
T Consensus 330 ~~~ 332 (431)
T KOG3525|consen 330 TTV 332 (431)
T ss_pred ccC
Confidence 333
No 45
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.45 E-value=7.8e-07 Score=103.98 Aligned_cols=167 Identities=19% Similarity=0.220 Sum_probs=96.3
Q ss_pred cchhhhccCchHHHhcCCCCCCcEEEEEc-CCCCCCCCCCCCCCCCccCCCCC-----CCCCCCCchhhhHhhhccCCCc
Q psy15698 195 PRQITSILQANTLWDLGIRGSGVKVAVFD-TGLSSGHTGFNNVAERTDWTNEN-----TLEDKLGHGTFVAGLIASSQRC 268 (577)
Q Consensus 195 p~~~~~~i~~~~~w~~g~~G~gV~VaViD-tGid~~Hpdl~~~~~~~~~~~~~-----~~~D~~gHGT~VAGiIag~~~~ 268 (577)
|..+....++..+.+.+.+|+|++|||+| -|-.....|+.-....+..-+.. -.....+|+||=+.-+.=+.+.
T Consensus 208 Ps~l~~~ynit~l~~~g~tGkG~tIaIid~yG~p~~~~dl~~Fd~~~Gip~~~~~~V~~ig~g~~~~~~g~~E~sLDVE~ 287 (1174)
T COG4934 208 PSTLAKAYNITALYESGATGKGETIAIIDAYGDPYNNQDLYSFDQQYGIPNPILSRVTYIGPGIGSGTGGAEETSLDVEW 287 (1174)
T ss_pred cchhhhhcceeecccCCCCCCCcEEEEEeccCCcccHHHHHHHHHhhCCCCCCceEEEEeCCCCCCCCCccccceeehhh
Confidence 44566777888888899999999999999 56554443333100000000000 0112335666544322212222
Q ss_pred -cccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCC-CcEEEeCCCCCC-----C--CCHHHHHHHHHHHcCCcEEEE
Q psy15698 269 -LGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKK-MDVLNLSIGGPD-----F--MDFPFVDKVWELTANRVILIS 339 (577)
Q Consensus 269 -~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g-~~ViN~S~G~~~-----~--~~~~~~~ai~~a~~~gilvV~ 339 (577)
.-+||+|+|..+-+-. .....+..|+++....- --++-.||+... + .-+.+....+.|.++|+.+++
T Consensus 288 s~A~AP~A~I~lvvap~----~~~~a~dna~n~~~~~~~s~~ip~S~s~~~~~~~~~~~~~~~~d~l~~qasaeGITi~A 363 (1174)
T COG4934 288 SHAMAPKANIDLVVAPN----PLVSALDNAYNEVLYYMVSFVIPISWSYAEFQGPISPGYADLMDLLYEQASAEGITIFA 363 (1174)
T ss_pred hhccCccCceEEEEcCC----CceehhhHHHHHHHHhhhcccccchhHHHHhccCCChHHHHHHHHHHHHhhccceEEEE
Confidence 3379999999886521 12233333443333221 133335666421 1 112344555667889999999
Q ss_pred ecCCCCCCC------CCCCCCCCCCCeEEEee
Q psy15698 340 AIGNDGPLY------GTLNNPADQMDVIGVGG 365 (577)
Q Consensus 340 AAGN~g~~~------~~~~~Pa~~~~vI~VGA 365 (577)
|+|..|... .++.+|++.|.|.+||+
T Consensus 364 ASGD~Gay~~~~~~~~sv~~PasSPYVtsVGG 395 (1174)
T COG4934 364 ASGDSGAYDDTPTPYLSVNFPASSPYVTSVGG 395 (1174)
T ss_pred ecccccccCCCcccceeecccCCCccEEeecC
Confidence 999987633 35779999999999999
No 46
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. Limited proteolysis of most large protein precursors is carried out in vivo by the subtilisin-like pro-protein convertases. Many important biological processes such as peptide hormone synthesis, viral protein processing and receptor maturation involve proteolytic processing by these enzymes []. The subtilisin-serine protease (SRSP) family hormone and pro-protein convertases (furin, PC1/3, PC2, PC4, PACE4, PC5/6, and PC7/7/LPC) act within the secretory pathway to cleave polypeptide precursors at specific basic sites, generating their biologically active forms. Serum proteins, pro-hormones, receptors, zymogens, viral surface glycoproteins, bacterial toxins, amongst others, are activated by this route []. The SRSPs share the same domain structure, including a signal peptide, the pro-peptide, the catalytic domain, the P/middle or homo B domain, and the C terminus. Proteinase propeptide inhibitors (sometimes refered to as activation peptides) are responsible for the modulation of folding and activity of the pro-enzyme or zymogen. The pro-segment docks into the enzyme moiety shielding the substrate binding site, thereby promoting inhibition of the enzyme. Several such propeptides share a similar topology [], despite often low sequence identities []. The propeptide region has an open-sandwich antiparallel-alpha/antiparallel-beta fold, with two alpha-helices and four beta-strands with a (beta/alpha/beta)x2 topology. This group of sequences contain the propeptide domain at the N terminus of peptidases belonging to MEROPS family S8A, subtilisins. A number of the members of this group of sequences belong to MEROPS inhibitor family I9, clan I-. The propeptide is removed by proteolytic cleavage; removal activating the enzyme.; GO: 0004252 serine-type endopeptidase activity, 0042802 identical protein binding, 0043086 negative regulation of catalytic activity; PDB: 3CNQ_P 1SPB_P 3CO0_P 1ITP_A 1V5I_B 1SCJ_B 3P5B_P 2XTJ_P 2W2M_P 2P4E_P ....
Probab=98.29 E-value=2.7e-06 Score=70.59 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=50.1
Q ss_pred eeEEEEcCCCChhHHHHHHHHHhc----CCC---CccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEe
Q psy15698 55 EFIVTFRGYYKSAARSRYIAAALN----NSD---SVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVT 127 (577)
Q Consensus 55 eyIV~fk~~~~~~~~~~~i~~~l~----~~~---~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Ve 127 (577)
+|||.||+........+...+.+. ... ...+.+++ +.|...|++|.++++++.+++|+++|+|++||
T Consensus 1 ~YIV~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~y~~~~~Gfs~~l~~~~i~~L~~~p~V~~Ve 74 (82)
T PF05922_consen 1 RYIVVFKDDASAASSFSSHKSWQASILKSALKSASSINAKVL------YSYDNAFNGFSAKLSEEEIEKLRKDPGVKSVE 74 (82)
T ss_dssp EEEEEE-TTSTHHCHHHHHHHHHH----HHHHTH-TTT-EEE------EEESSTSSEEEEEE-HHHHHHHHTSTTEEEEE
T ss_pred CEEEEECCCCCcchhHHHHHHHHHHHHhhhhhhhcccCCceE------EEEeeeEEEEEEEeCHHHHHHHHcCCCeEEEE
Confidence 699999998765542222222222 100 12344555 34666899999999999999999999999999
Q ss_pred cCeEEEc
Q psy15698 128 PQRLVHR 134 (577)
Q Consensus 128 p~~~~~~ 134 (577)
||..+++
T Consensus 75 ~D~~v~l 81 (82)
T PF05922_consen 75 PDQVVSL 81 (82)
T ss_dssp EECEEEE
T ss_pred eCceEec
Confidence 9999875
No 47
>PF08121 Toxin_33: Waglerin family; InterPro: IPR012637 This family consists of the lethal peptides (waglerins) that are found in the venom of Trimeresurus wagleri (Wagler's pit viper) (Tropidolaemus wagleri). Waglerins are 22-24 residue lethal peptides and are competitive antagonist of the muscle nicotinic receptor (nAChR). Waglerin-1 possesses a distinctive selectivity for the alpha-epsilon interface binding site of the mouse nAChR [].; GO: 0030550 acetylcholine receptor inhibitor activity, 0005576 extracellular region
Probab=39.99 E-value=16 Score=21.96 Aligned_cols=12 Identities=42% Similarity=0.847 Sum_probs=9.5
Q ss_pred CCCCC-CCCCCCC
Q psy15698 527 LRYPQ-GYFPRDN 538 (577)
Q Consensus 527 ~~~~~-~~~~~~~ 538 (577)
-+||| -||||..
T Consensus 8 pcyppchyiprpk 20 (22)
T PF08121_consen 8 PCYPPCHYIPRPK 20 (22)
T ss_pred cCCCCccccCCCC
Confidence 36898 8999974
No 48
>PRK02230 inorganic pyrophosphatase; Provisional
Probab=31.22 E-value=89 Score=30.35 Aligned_cols=23 Identities=30% Similarity=0.634 Sum_probs=19.6
Q ss_pred cccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698 524 YHNLRYPQ--GYFPRDNLKMKNDPLD 547 (577)
Q Consensus 524 ~~~~~~~~--~~~~~~~~~~~~~~~~ 547 (577)
|+++.||- ||||+- |.-.+||||
T Consensus 35 ~~~~~YP~NYGfIP~T-l~~DGDPLD 59 (184)
T PRK02230 35 RGDFVYPANYGFIKEA-LDWDGDELD 59 (184)
T ss_pred CCCCCCCcCcccCCCc-cCCCCCceE
Confidence 68899997 999984 677888988
No 49
>PLN02373 soluble inorganic pyrophosphatase
Probab=29.64 E-value=88 Score=30.48 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=33.7
Q ss_pred ccceeeEEEeecCCCCCccceeEeeceeEEEEeCceeEeeeccccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698 482 SSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGIKRILWDQYHNLRYPQ--GYFPRDNLKMKNDPLD 547 (577)
Q Consensus 482 ~~g~~~~~v~~~~~~~~~~~~~~~~~p~~~iipr~~~i~~~q~~~~~~~~--~~~~~~~~~~~~~~~~ 547 (577)
..+.+++.|+.|.....+--...-.-.+++ .|+| |.++.||- ||||+- |.-.+||||
T Consensus 21 ~~~~v~vVIEIP~gs~~KyE~dk~~g~i~~-----Dr~l---~~~~~yP~nYGfIP~T-~~~DgDPLD 79 (188)
T PLN02373 21 APAIFNCVVEITKGSKVKYELDKKTGLIKV-----DRVL---YSSVVYPHNYGFIPRT-LCEDNDPLD 79 (188)
T ss_pred CCCEEEEEEEECCCCCeeEEEccCCCCEEE-----eeec---ccCCcCCccccccccc-ccCCCCccE
Confidence 357788888888754111111000001111 1232 67888996 999985 778899998
No 50
>KOG4266|consensus
Probab=24.80 E-value=31 Score=39.13 Aligned_cols=50 Identities=58% Similarity=0.977 Sum_probs=44.1
Q ss_pred cceeecccCCccccccccccccceeeEEEeecCCCCCccceeEeeceeEE
Q psy15698 462 FLEVSIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGT 511 (577)
Q Consensus 462 ~l~~~~~~~~~~~~~~~~g~~~g~~~~~v~~~~~~~~~~~~~~~~~p~~~ 511 (577)
+...++++.+++.+.||+|+.+.|..|.-.++.++|+.+++.+..+.++.
T Consensus 193 LWk~GyTGa~VkvAiFDTGl~~~HPHFrnvKERTNWTNE~tLdD~lgHGT 242 (1033)
T KOG4266|consen 193 LWKKGYTGAKVKVAIFDTGLRADHPHFRNVKERTNWTNEDTLDDNLGHGT 242 (1033)
T ss_pred HHhccccCCceEEEEeecccccCCccccchhhhcCCcCccccccCcccce
Confidence 34455666777889999999999999999999999999999999999987
No 51
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=24.60 E-value=2.4e+02 Score=31.13 Aligned_cols=71 Identities=24% Similarity=0.372 Sum_probs=52.8
Q ss_pred CCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCC-CcEEEeCCCCCC------CCCHHHHHHHHHHHcCCcEEEEecCCC
Q psy15698 272 APDAELHIFRVFTNQQVSYTSWFLDAFNYAILKK-MDVLNLSIGGPD------FMDFPFVDKVWELTANRVILISAIGND 344 (577)
Q Consensus 272 AP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g-~~ViN~S~G~~~------~~~~~~~~ai~~a~~~gilvV~AAGN~ 344 (577)
.|.++++.+.+.-. |.+....+++||+.+-+.+ +|||=..=||.. |.++.+..++ .+..+.+|.|.|-+
T Consensus 160 ~P~~~viv~pt~VQ-G~~A~~eIv~aI~~an~~~~~DvlIVaRGGGSiEDLW~FNdE~vaRAi---~~s~iPvISAVGHE 235 (440)
T COG1570 160 FPSVEVIVYPTLVQ-GEGAAEEIVEAIERANQRGDVDVLIVARGGGSIEDLWAFNDEIVARAI---AASRIPVISAVGHE 235 (440)
T ss_pred CCCCeEEEEecccc-CCCcHHHHHHHHHHhhccCCCCEEEEecCcchHHHHhccChHHHHHHH---HhCCCCeEeecccC
Confidence 57788888876443 4567788999999999877 999999998873 3333444443 45789999999987
Q ss_pred CC
Q psy15698 345 GP 346 (577)
Q Consensus 345 g~ 346 (577)
-.
T Consensus 236 tD 237 (440)
T COG1570 236 TD 237 (440)
T ss_pred CC
Confidence 53
No 52
>cd00412 pyrophosphatase Inorganic pyrophosphatase. These enzymes hydrolyze inorganic pyrophosphate (PPi) to two molecules of orthophosphates (Pi). The reaction requires bivalent cations. The enzymes in general exist as homooligomers.
Probab=23.63 E-value=1.1e+02 Score=28.88 Aligned_cols=22 Identities=41% Similarity=0.933 Sum_probs=18.0
Q ss_pred ccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698 525 HNLRYPQ--GYFPRDNLKMKNDPLD 547 (577)
Q Consensus 525 ~~~~~~~--~~~~~~~~~~~~~~~~ 547 (577)
.++.||- ||||+ -|.-.+||||
T Consensus 34 ~~~~yP~nYGfiP~-T~~~DgDPlD 57 (155)
T cd00412 34 SSMGYPWNYGFIPQ-TLEDDGDPLD 57 (155)
T ss_pred cCCcCcccccccCC-cccCCCCceE
Confidence 3689997 99998 4677889998
No 53
>PF05964 FYRN: F/Y-rich N-terminus; InterPro: IPR003888 The "FY-rich" domain N-terminal region is sometimes closely juxtaposed with the C-terminal region (IPR003889 from INTERPRO), but sometimes is far distant. It is of unknown function, but occurs frequently in chromatin-associated proteins like trithorax and its homologues.; GO: 0005634 nucleus; PDB: 2WZO_A.
Probab=22.92 E-value=24 Score=26.98 Aligned_cols=18 Identities=44% Similarity=0.907 Sum_probs=8.9
Q ss_pred eEeeec--cccCC--CCCCCCC
Q psy15698 518 RILWDQ--YHNLR--YPQGYFP 535 (577)
Q Consensus 518 ~i~~~q--~~~~~--~~~~~~~ 535 (577)
+|+|++ ||+-+ ||.||--
T Consensus 11 ~i~~~~~~fh~~~~IyP~Gy~s 32 (54)
T PF05964_consen 11 KIVPDRPAFHSERYIYPVGYKS 32 (54)
T ss_dssp E---SSGGGB-SS-B--EEEEE
T ss_pred EEeCCCCCccCCCEEeeCCEEE
Confidence 567777 99887 5888853
No 54
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=22.00 E-value=3e+02 Score=28.63 Aligned_cols=71 Identities=24% Similarity=0.299 Sum_probs=49.0
Q ss_pred CCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCC----CcEEEeCCCCCC------CCCHHHHHHHHHHHcCCcEEEEec
Q psy15698 272 APDAELHIFRVFTNQQVSYTSWFLDAFNYAILKK----MDVLNLSIGGPD------FMDFPFVDKVWELTANRVILISAI 341 (577)
Q Consensus 272 AP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g----~~ViN~S~G~~~------~~~~~~~~ai~~a~~~gilvV~AA 341 (577)
.|.++++.+.+.= .|......+++||+.+.+.+ +|||=+-=||+. |.+..+.++| .+..+.||.|.
T Consensus 39 ~~~~~~~~~p~~v-QG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs~eDL~~FN~e~varai---~~~~~PvisaI 114 (319)
T PF02601_consen 39 NPIVEIILYPASV-QGEGAAASIVSALRKANEMGQADDFDVIIIIRGGGSIEDLWAFNDEEVARAI---AASPIPVISAI 114 (319)
T ss_pred CCCcEEEEEeccc-cccchHHHHHHHHHHHHhccccccccEEEEecCCCChHHhcccChHHHHHHH---HhCCCCEEEec
Confidence 4556666555432 24556788999999998765 999999999874 2233333333 45789999999
Q ss_pred CCCCC
Q psy15698 342 GNDGP 346 (577)
Q Consensus 342 GN~g~ 346 (577)
|=+-.
T Consensus 115 GHe~D 119 (319)
T PF02601_consen 115 GHETD 119 (319)
T ss_pred CCCCC
Confidence 98753
Done!