Query         psy15698
Match_columns 577
No_of_seqs    471 out of 3123
Neff          7.0 
Searched_HMMs 29240
Date          Fri Aug 16 19:09:34 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy15698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15698hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2z2z_A TK-subtilisin precursor 100.0 6.5E-53 2.2E-57  451.6  18.8  326   53-459     2-382 (395)
  2 3afg_A Subtilisin-like serine  100.0 2.8E-52 9.7E-57  462.3  21.9  328   54-458    36-407 (539)
  3 1r6v_A Subtilisin-like serine  100.0 2.4E-50 8.1E-55  453.8  24.7  356   51-468    29-438 (671)
  4 3t41_A Epidermin leader peptid 100.0 4.9E-50 1.7E-54  438.5  20.6  333   51-460    42-456 (471)
  5 2p4e_P Proprotein convertase s 100.0 5.7E-51   2E-55  456.8   8.0  316   51-447    73-422 (692)
  6 1dbi_A AK.1 serine protease; h 100.0 1.8E-48 6.3E-53  398.6  18.0  230  201-449    17-262 (280)
  7 1r0r_E Subtilisin carlsberg; h 100.0 2.2E-48 7.4E-53  396.8  17.3  240  200-458     9-264 (274)
  8 1to2_E Subtilisin BPN'; serine 100.0 3.8E-48 1.3E-52  396.5  17.8  244  195-458     5-265 (281)
  9 2ixt_A 36KDA protease; serine  100.0 2.3E-48 7.9E-53  403.1  16.0  257  200-459    11-305 (310)
 10 1gci_A Subtilisin; hydrolase,  100.0 6.8E-48 2.3E-52  392.2  18.7  237  200-458     9-259 (269)
 11 1thm_A Thermitase; hydrolase(s 100.0   1E-47 3.5E-52  392.8  19.0  231  201-451    17-263 (279)
 12 2z30_A TK-subtilisin; thermoco 100.0 9.6E-48 3.3E-52  400.4  13.9  240  200-459    13-307 (320)
 13 2x8j_A Intracellular subtilisi 100.0 7.1E-47 2.4E-51  395.1  16.5  242  200-458    26-300 (327)
 14 3lpc_A APRB2; protease, subtil 100.0   2E-46 6.9E-51  393.2  15.1  240  201-458    18-326 (340)
 15 1sh7_A Extracellular subtilisi 100.0 7.5E-46 2.6E-50  380.0  14.8  229  202-449    16-258 (284)
 16 2iy9_A SUBA; toxin, shiga, pla 100.0 3.8E-46 1.3E-50  392.4  11.7  232  201-450    29-311 (347)
 17 4dzt_A Aqualysin-1, aqualysin- 100.0 6.7E-46 2.3E-50  378.7  12.8  232  201-452    17-263 (276)
 18 2b6n_A Proteinase K; S binding 100.0 1.7E-45 5.8E-50  376.2  12.9  228  202-448    18-261 (278)
 19 1wmd_A Protease; alpha-beta hy 100.0   1E-44 3.5E-49  392.6  17.7  256  200-463     6-312 (434)
 20 1y9z_A Alkaline serine proteas 100.0 7.4E-45 2.5E-49  394.5  14.3  242  200-460     9-418 (441)
 21 4h6x_A Thiazoline oxidase/subt 100.0 1.6E-44 5.6E-49  381.6  15.6  237  202-451    18-318 (357)
 22 2pwa_A Proteinase K; structure 100.0 6.2E-45 2.1E-49  372.3  10.1  219  207-448    24-260 (279)
 23 4h6w_A N-terminal cyanobactin  100.0 1.1E-44 3.9E-49  374.4  11.9  242  200-454     6-271 (306)
 24 1xf1_A C5A peptidase, SCP; hyd 100.0 2.8E-43 9.7E-48  412.4  20.2  243  200-450     2-454 (926)
 25 3i6s_A Subtilisin-like proteas 100.0 1.6E-43 5.6E-48  399.0  15.3  237  204-449    13-464 (649)
 26 3f7m_A Alkaline serine proteas 100.0 6.8E-44 2.3E-48  364.4  11.0  222  204-448    22-261 (279)
 27 3zxy_A Subtilisin-like protein 100.0 9.9E-44 3.4E-48  363.6  11.7  234  212-458     4-264 (282)
 28 2id4_A Kexin; KEX2, kexin, fur 100.0 8.5E-43 2.9E-47  384.1  15.7  233  201-450    40-311 (503)
 29 2qtw_B Proprotein convertase s 100.0 2.9E-43   1E-47  385.3  11.5  223  206-447    17-270 (546)
 30 2oxa_A Extracellular serine pr 100.0   1E-41 3.5E-46  383.1  20.2  237  200-450    55-375 (600)
 31 1p8j_A Furin precursor; prohor 100.0 4.3E-42 1.5E-46  375.7  15.7  242  201-449    24-299 (471)
 32 3hjr_A Extracellular serine pr 100.0 1.5E-41 5.2E-46  381.9  19.5  248  201-450    56-375 (600)
 33 3vta_A Cucumisin; subtilisin-l 100.0 6.3E-42 2.2E-46  385.8  11.7  234  207-449    14-453 (621)
 34 3lxu_X Tripeptidyl-peptidase 2 100.0 1.2E-36   4E-41  357.1  19.7  225  216-449   214-504 (1354)
 35 1t1e_A Kumamolisin; proenzyme,  99.9   4E-24 1.4E-28  237.0   6.6  222  195-428   196-483 (552)
 36 1ga6_A Serine-carboxyl protein  99.8 2.1E-19 7.2E-24  190.1   5.6  157  270-429    91-305 (372)
 37 3edy_A Tripeptidyl-peptidase 1  98.6   5E-09 1.7E-13  115.5   1.6  132  293-426   284-471 (544)
 38 3cnq_P Subtilisin BPN'; unclea  98.6 1.1E-07 3.7E-12   78.0   8.5   71   51-135     6-76  (80)
 39 2w2n_P Proprotein convertase s  98.3 9.2E-07 3.1E-11   77.6   7.5   76   51-134    35-113 (114)
 40 2qtw_A Proprotein convertase s  98.2   2E-06 6.9E-11   76.5   7.6   76   51-134    45-123 (124)
 41 1v5i_B POIA1, IA-1=serine prot  98.1   6E-06 2.1E-10   67.0   7.9   70   54-134     3-75  (76)
 42 2z30_B TK-subtilisin; thermoco  96.7  0.0022 7.7E-08   50.1   5.6   63   54-134     2-64  (65)
 43 3lxu_X Tripeptidyl-peptidase 2  87.7    0.27 9.1E-06   59.0   3.5   24  211-234    32-55  (1354)
 44 2bqx_A Inorganic pyrophosphata  28.1      27 0.00094   32.1   2.4   54  483-547    12-69  (173)
 45 3tr4_A Inorganic pyrophosphata  27.2      36  0.0012   31.5   3.0   53  484-547    15-72  (178)
 46 3gvf_A Inorganic pyrophosphata  26.3      38  0.0013   31.8   3.0   54  483-547    34-92  (196)
 47 2au7_A Inorganic pyrophosphata  20.5      57  0.0019   30.1   2.9   53  484-547    13-70  (175)
 48 3ld3_A Inorganic pyrophosphata  20.1      52  0.0018   31.0   2.6   30  517-547    59-92  (199)

No 1  
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00  E-value=6.5e-53  Score=451.61  Aligned_cols=326  Identities=23%  Similarity=0.280  Sum_probs=265.5

Q ss_pred             cceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEecCeEE
Q psy15698         53 HKEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVTPQRLV  132 (577)
Q Consensus        53 ~~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Vep~~~~  132 (577)
                      +.+|||+||+....+   +.    ++..    +.+++.+      |. .|+++.++++++.+++|+++|.|++|||++.+
T Consensus         2 ~~~~iV~~~~~~~~~---~~----~~~~----g~~v~~~------~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~   63 (395)
T 2z2z_A            2 TIRVIVSVDKAKFNP---HE----VLGI----GGHIVYQ------FK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQA   63 (395)
T ss_dssp             EEEEEEEECTTTCCH---HH----HHHT----TCEEEEE------CS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEE
T ss_pred             cEEEEEEECCCccHH---HH----HHHc----CCEEEEE------ec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeee
Confidence            468999999975432   22    2222    3346543      33 47899999999999999999999999999998


Q ss_pred             EcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchhhhccCchHHHhcCC
Q psy15698        133 HRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQITSILQANTLWDLGI  212 (577)
Q Consensus       133 ~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~~~~i~~~~~w~~g~  212 (577)
                      ++......              +.           ...                 .......+|.+ +.++++.+|+.+ 
T Consensus        64 ~~~~~~~~--------------~~-----------~~~-----------------~~~~~~~~w~~-~~i~~~~~w~~~-   99 (395)
T 2z2z_A           64 VLLGKPSW--------------LG-----------GGS-----------------TQPAQTIPWGI-ERVKAPSVWSIT-   99 (395)
T ss_dssp             EECCEECC------------------------------------------------CCSCCCCHHH-HHTTCGGGGGTC-
T ss_pred             cccCCCCc--------------cc-----------ccc-----------------cCccccCCcch-hhcCHHHHHhhc-
Confidence            76432100              00           000                 00001123333 357899999998 


Q ss_pred             CCCC--cEEEEEcCCCCCCCCCCCC-CCCCccCCCCC------CCCCCCCchhhhHhhhcc---CCCccccCCCCcEeEE
Q psy15698        213 RGSG--VKVAVFDTGLSSGHTGFNN-VAERTDWTNEN------TLEDKLGHGTFVAGLIAS---SQRCLGFAPDAELHIF  280 (577)
Q Consensus       213 ~G~g--V~VaViDtGid~~Hpdl~~-~~~~~~~~~~~------~~~D~~gHGT~VAGiIag---~~~~~GvAP~A~l~~~  280 (577)
                      +|+|  |+||||||||+.+||+|.+ +..+++|....      +..|..||||||||||+|   +.++.||||+|+|+.+
T Consensus       100 ~G~g~~v~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~n~~g~~GvAp~a~l~~~  179 (395)
T 2z2z_A          100 DGSVSVIQVAVLDTGVDYDHPDLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSV  179 (395)
T ss_dssp             SSCCTTCEEEEEESCBCTTCTTTGGGEEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCCSSSSCCCSSTTCEEEEE
T ss_pred             CCCCCcEEEEEEcCCCCCCChhHhhccccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeecCCCceEEECCCCEEEEE
Confidence            9999  9999999999999999984 44455555432      146888999999999998   3467999999999999


Q ss_pred             EEecCCCCCchHHHHHHHHHHHHC--------------------CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEe
Q psy15698        281 RVFTNQQVSYTSWFLDAFNYAILK--------------------KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISA  340 (577)
Q Consensus       281 kv~~~~g~~~~~~~~~ai~~a~~~--------------------g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~A  340 (577)
                      |+++..+.++.++++++|+||+++                    +++|||||||++.. ...+.+++.++.++|+++|+|
T Consensus       180 kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~A  258 (395)
T 2z2z_A          180 RVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-DSYLYDMIIQAYNAGIVIVAA  258 (395)
T ss_dssp             ECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEE
T ss_pred             EEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC-CHHHHHHHHHHHHCCCEEEEE
Confidence            999988888889999999999988                    99999999998753 678999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCc
Q psy15698        341 IGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNG  410 (577)
Q Consensus       341 AGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~  410 (577)
                      |||+|..  ...+|+..+++|+|||++.++.++.|||+|              |+|+|||++|++          +||||
T Consensus       259 AGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~a~fS~~G--------------~~v~APG~~i~s~~~~~~y~~~sGTS~  322 (395)
T 2z2z_A          259 SGNEGAP--SPSYPAAYPEVIAVGAIDSNDNIASFSNRQ--------------PEVSAPGVDILSTYPDDSYETLMGTAM  322 (395)
T ss_dssp             CCSSCCS--SCCBTTTSTTEEEEEEECTTSCBCTTSCSS--------------CSEEEECSSEEEEETTTEEEEEESHHH
T ss_pred             CCCCCCC--CCCCccCCCCEEEEEEecCCCCCCcccCCC--------------CCEEeCCCCeeeecCCCceEecCCHHH
Confidence            9999974  347899999999999999999999999999              568999999974          79999


Q ss_pred             ccccCCccccccccccCCC-------------cccHHHHHHHHhhcceecCCCccccCCCCC
Q psy15698        411 ECQYMWPYCTQPLYHGAIP-------------IIVNVTILNGMGVVGKILERPKWYPYLPHN  459 (577)
Q Consensus       411 A~P~VaG~a~~aL~~~~~P-------------~l~~~~i~~~l~~ta~~~~~~~~~p~~~~~  459 (577)
                      |||+|+|  ++||+++.+|             .+++.+|+++|..||..++.++|+..+|++
T Consensus       323 AaP~VaG--~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g~~~~~G~G  382 (395)
T 2z2z_A          323 ATPHVSG--VVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGWDADYGYG  382 (395)
T ss_dssp             HHHHHHH--HHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSSSBTTTBTC
T ss_pred             HHHHHHH--HHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCCCCCCccCc
Confidence            9999999  7799999999             999999999999999999988998887774


No 2  
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00  E-value=2.8e-52  Score=462.33  Aligned_cols=328  Identities=23%  Similarity=0.301  Sum_probs=266.7

Q ss_pred             ceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHH-----------hcCCC
Q psy15698         54 KEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSL-----------LEHPL  122 (577)
Q Consensus        54 ~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L-----------~~~p~  122 (577)
                      -+|||+||+....++..+.    ++..    +.+++.+      |. .|+++.++++++.+++|           +++|.
T Consensus        36 ~~~iV~~~~~~~~~~~~~~----~~~~----g~~v~~~------~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~  100 (539)
T 3afg_A           36 VSTIIMFDNQADKEKAVEI----LDFL----GAKIKYN------YH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSG  100 (539)
T ss_dssp             EEEEEEESSHHHHHHHHHH----HHHH----TCEEEEE------CS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTT
T ss_pred             eEEEEEECCCCCHHHHHHH----HHhc----CCeEEEE------ee-eeeEEEEEeCHHHHHHHHhhccccccccccCCC
Confidence            3599999986544433333    2221    2345533      32 58999999999999999           89999


Q ss_pred             eEEEecCeEEEcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchhhhcc
Q psy15698        123 IKRVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQITSIL  202 (577)
Q Consensus       123 V~~Vep~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~~~~i  202 (577)
                      |++|||+..++.......                  .                 ..|                   ...+
T Consensus       101 V~~v~~d~~~~~~~~~~~------------------~-----------------~~~-------------------~~~~  126 (539)
T 3afg_A          101 VQFIQEDYVVKVAVETEG------------------L-----------------DES-------------------AAQV  126 (539)
T ss_dssp             EEEEEECCEEECC-----------------------------------------------------------------CC
T ss_pred             eeEEEecccccccCcccc------------------C-----------------Ccc-------------------cccc
Confidence            999999999876321000                  0                 000                   0236


Q ss_pred             CchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCC-CCCCCCCCchhhhHhhhccC----C-CccccCCCC
Q psy15698        203 QANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNE-NTLEDKLGHGTFVAGLIASS----Q-RCLGFAPDA  275 (577)
Q Consensus       203 ~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~-~~~~D~~gHGT~VAGiIag~----~-~~~GvAP~A  275 (577)
                      +++.+|+.+++|+||+||||||||+.+||+|.+ +...++|.+. ..+.|.+||||||||+|+|.    . .+.||||+|
T Consensus       127 ~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~i~~~~d~~~~~~~~~D~~gHGThVAgiiag~~~~~~g~~~GvAp~A  206 (539)
T 3afg_A          127 MATNMWNLGYDGSGITIGIIDTGIDASHPDLQGKVIGWVDFVNGKTTPYDDNGHGTHVASIAAGTGAASNGKYKGMAPGA  206 (539)
T ss_dssp             BCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTTTEEEEEETTTCCSSCCBSSSHHHHHHHHHHCCCGGGTTTTCCSCTTC
T ss_pred             CcHhHHhcCCCCCCcEEEEEecCCCCCChHHhCCEeeeEECCCCCCCCCCCCCCHHHHHHHHhCcCccCCCCEEEECCCC
Confidence            778889999999999999999999999999985 4455677654 35678899999999999983    2 268999999


Q ss_pred             cEeEEEEecCCCCCchHHHHHHHHHHHHC----CCcEEEeCCCCCCC--CCHHHHHHHHHHHcCCcEEEEecCCCCCCCC
Q psy15698        276 ELHIFRVFTNQQVSYTSWFLDAFNYAILK----KMDVLNLSIGGPDF--MDFPFVDKVWELTANRVILISAIGNDGPLYG  349 (577)
Q Consensus       276 ~l~~~kv~~~~g~~~~~~~~~ai~~a~~~----g~~ViN~S~G~~~~--~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~  349 (577)
                      +|+.+|+++..+.+..++++++|+||+++    |++|||||||....  ....+.+++.+|.++|+++|+||||+|.+..
T Consensus       207 ~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~  286 (539)
T 3afg_A          207 KLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKY  286 (539)
T ss_dssp             EEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSS
T ss_pred             EEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCC
Confidence            99999999988878889999999999976    89999999998643  3578899999999999999999999998767


Q ss_pred             CCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------------------CcCCc
Q psy15698        350 TLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------------------PSTNG  410 (577)
Q Consensus       350 ~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------------------sGTS~  410 (577)
                      ++.+|+..+++|+|||++..+.++.|||+||.      .++++||||+|||++|.+                   +||||
T Consensus       287 ~~~~Pa~~~~vitVgA~~~~~~~a~fSs~Gp~------~~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSm  360 (539)
T 3afg_A          287 TVGSPAAASKVITVGAVDKYDVITDFSSRGPT------ADNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAM  360 (539)
T ss_dssp             CCCTTTTCSSSEEEEEECTTSCBCSSSCCCCC------TTCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHH
T ss_pred             cccCCccCCceEEEeeecCCcccccccCCCCC------CCCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHH
Confidence            78899999999999999999999999999965      478999999999998852                   59999


Q ss_pred             ccccCCccccccccccCCCcccHHHHHHHHhhcceecCCCc-cccCCCC
Q psy15698        411 ECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILERPK-WYPYLPH  458 (577)
Q Consensus       411 A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~~-~~p~~~~  458 (577)
                      |||||+|  ++||+++.+|.+++.+|+++|..||..++..+ .+..+|+
T Consensus       361 AaP~VAG--~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~~~~~~~G~  407 (539)
T 3afg_A          361 ATPHVAG--IAALLLQAHPSWTPDKVKTALIETADIVKPDEIADIAYGA  407 (539)
T ss_dssp             HHHHHHH--HHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGGCSBTTTBT
T ss_pred             HHHHHHH--HHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCCccCccC
Confidence            9999999  77999999999999999999999999887443 3333454


No 3  
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00  E-value=2.4e-50  Score=453.76  Aligned_cols=356  Identities=16%  Similarity=0.184  Sum_probs=263.6

Q ss_pred             cccceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccH----HHHHHHhc--CCCeE
Q psy15698         51 NLHKEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVT----AALSSLLE--HPLIK  124 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~----~~~~~L~~--~p~V~  124 (577)
                      +++++|||+||+...   .++.+ +.++.       +++.+.       ..++++.++.+.    +.+++|++  +|+|+
T Consensus        29 ~~~~~~IV~~k~~~~---~~~~~-~~~g~-------~v~~~~-------~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~   90 (671)
T 1r6v_A           29 YTEGKILVGYNDRSE---VDKIV-KAVNG-------KVVLEL-------PQIKVVSIKLNGMTVKQAYDKIKALALKGIR   90 (671)
T ss_dssp             BCTTEEEEEESSHHH---HHHHH-HHHTC-------EEEEEE-------GGGTEEEEECSSCCHHHHHHHHTTSCCSSEE
T ss_pred             cCCccEEEEECCCcC---HHHHH-HhcCC-------eEEEEc-------CCCcEEEEEeCCcCHHHHHHHHHhccCCCce
Confidence            899999999997532   22222 23322       244321       246777776653    56777864  89999


Q ss_pred             EEecCeEEEcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchhhhccCc
Q psy15698        125 RVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQITSILQA  204 (577)
Q Consensus       125 ~Vep~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~~~~i~~  204 (577)
                      +|||++++++..+....           +++...  .     ..+.........        -...+...+|.+ +.|++
T Consensus        91 ~vepd~~~~l~~p~~~~-----------~~~~~~--~-----~~~~~~~~~~~~--------~~~~~~~~~W~l-~~I~~  143 (671)
T 1r6v_A           91 YVEPSYKRELIKPTVVK-----------PNPDMY--K-----IRKPGLNSTARD--------YGEELSNELWGL-EAIGV  143 (671)
T ss_dssp             EEECCBCCEECCCEECC-----------CCTTTT--C-----SSSSCCSSSTTC--------CSSTTGGGCHHH-HHTTC
T ss_pred             EEecCeEEEeccccccC-----------cccccc--c-----cccccccccccc--------ccccccccCCch-hccCC
Confidence            99999887654221110           000000  0     000000000000        000111223443 46899


Q ss_pred             hHH-HhcCCCCCCcEEEEEcCCCCCCCCCCCCC-CCCccCCC------CCCCCCCCCchhhhHhhhcc---CCCccccCC
Q psy15698        205 NTL-WDLGIRGSGVKVAVFDTGLSSGHTGFNNV-AERTDWTN------ENTLEDKLGHGTFVAGLIAS---SQRCLGFAP  273 (577)
Q Consensus       205 ~~~-w~~g~~G~gV~VaViDtGid~~Hpdl~~~-~~~~~~~~------~~~~~D~~gHGT~VAGiIag---~~~~~GvAP  273 (577)
                      +.+ |+. ++|+||+||||||||+.+||+|.+. ..++++..      ..+..|.+||||||||+|+|   +.++.||||
T Consensus       144 ~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~~~g~~~~~~~~~p~~~d~~d~~gHGThVAGiIAa~~ng~gv~GVAP  222 (671)
T 1r6v_A          144 TQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQVIAGYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKKDGKGIVGVAP  222 (671)
T ss_dssp             CHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTBCCEEEGGGTEEECTTCBCCTTCSHHHHHHHHHHCCCSSSSCCCSCT
T ss_pred             chhhhhc-cCCCCCEEEEEeCCCCCCCccccccEEecccccCCCcCCCCCCCccCCCcchhhhhhhhccCCCCceEEECC
Confidence            999 999 8999999999999999999999853 33343321      12234567999999999998   346899999


Q ss_pred             CCcEeEEEEecC------CCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCC
Q psy15698        274 DAELHIFRVFTN------QQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPL  347 (577)
Q Consensus       274 ~A~l~~~kv~~~------~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~  347 (577)
                      +|+|+++|+++.      .+....+.+++||+||+++|++|||||||+..+ +..+.+++.+|.++|+++|+||||+|.+
T Consensus       223 ~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~~-s~~l~~Ai~~A~~~GvlvVaAAGN~g~~  301 (671)
T 1r6v_A          223 GAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY-SYTMKEAFDYAMEHGVVMVVSAGNNTSD  301 (671)
T ss_dssp             TSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCSCSSS
T ss_pred             CCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CHHHHHHHHHHHhCCCEEEEeCCCCCCC
Confidence            999999999986      233345678999999999999999999998753 6789999999999999999999999975


Q ss_pred             CCCCCCCCCCCCeEEEeeecCCCC---ccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------------------
Q psy15698        348 YGTLNNPADQMDVIGVGGINFEDQ---IAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------------------  405 (577)
Q Consensus       348 ~~~~~~Pa~~~~vI~VGA~~~~~~---~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------------------  405 (577)
                       ....+|+.++++|+|||++.++.   ++.|||+|+.            +||+|||++|.+                   
T Consensus       302 -~~~~yPA~~~~VItVgA~d~~g~~~~~a~fSn~G~~------------vdv~APG~~I~St~p~~~~~g~~~~~~~~~~  368 (671)
T 1r6v_A          302 -SHHQYPAGYPGVIQVAALDYYGGTFRVAGFSSRSDG------------VSVGAPGVTILSTVPGEDSIGYEGHNENVPA  368 (671)
T ss_dssp             -CCCCBTTTSTTCEEEEEEEEETTEEEECSSSCCCTT------------EEEEEECSSEEEECCCTTSTTCCCCCTTCCC
T ss_pred             -CCccCcccCCCeEEEEEEcCCCCceeeccccCCCCC------------eeEEecCCCEEeecCCCCccccccccccccc
Confidence             34689999999999999999888   9999999986            999999999853                   


Q ss_pred             ---------CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCCCccccCCCCCCccceeecc
Q psy15698        406 ---------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILERPKWYPYLPHNGEFLEVSIR  468 (577)
Q Consensus       406 ---------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~~g~~l~~~~~  468 (577)
                               +|||||||||+|  ++||+++.+|.+++.+|+++|..||..++.++++..+|++--.+..++.
T Consensus       369 ~~~~~y~~~sGTSmAAP~VAG--vaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g~d~~~G~G~vna~~Al~  438 (671)
T 1r6v_A          369 TNGGTYDYYQGTSMAAPHVTG--VVAVLLQKFPNAKPWQIRKLLENTAFDFNGNGWDHDTGYGLVKLDAALQ  438 (671)
T ss_dssp             SSSCCEEEEESHHHHHHHHHH--HHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSSCBTTTBTCBCCHHHHHH
T ss_pred             cCCCceEEecCccHHHHHHHH--HHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCCCCCCcccceeCHHHHhh
Confidence                     599999999999  7799999999999999999999999999999998888875444443333


No 4  
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00  E-value=4.9e-50  Score=438.48  Aligned_cols=333  Identities=17%  Similarity=0.214  Sum_probs=259.3

Q ss_pred             cccceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhc-CCCeEEEecC
Q psy15698         51 NLHKEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLE-HPLIKRVTPQ  129 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~-~p~V~~Vep~  129 (577)
                      ...+-|||++++..   ..    .+.+++.    +.+++.+      | ..|+++.++++++.+++|++ +|.|++|+|+
T Consensus        42 ~~~~~yiv~~~~~~---~~----~~~~~~~----g~~v~~~------~-~~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~  103 (471)
T 3t41_A           42 SEELYYSVEYKNTA---TF----NKLVKKK----SLNVVYN------I-PELHVAQIKMTKMHANALANYKNDIKYINAT  103 (471)
T ss_dssp             -CCEEEEEEESCHH---HH----HHHHHHH----TCEEEEE------E-GGGTEEEEEECHHHHHHHHTCTTTEEEEEEC
T ss_pred             CCceEEEEEcCCHH---HH----HHHHHhC----CCEEEEe------c-CCccEEEEEeCHHHHHHHHhcCCCCcEEEec
Confidence            44456999888642   22    2333322    2334422      3 24899999999999999999 9999999999


Q ss_pred             eEEEcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchhhhccCch-HHH
Q psy15698        130 RLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQITSILQAN-TLW  208 (577)
Q Consensus       130 ~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~~~~i~~~-~~w  208 (577)
                      +.+++......       ... .+++.+..||.                  .                  ..++.. .+|
T Consensus       104 ~~~~~~~~~~~-------~~~-~~~~~~~~~w~------------------l------------------~~i~~~~~~~  139 (471)
T 3t41_A          104 CSTCITSEKTI-------DRT-SNESLFSRQWD------------------M------------------NKITNNGASY  139 (471)
T ss_dssp             CSSCBCCCCCC-------CC----CCSCCCCHH------------------H------------------HTTTTTTGGG
T ss_pred             ceecccccccc-------ccC-CCCcccccccc------------------H------------------hhccCcHHHH
Confidence            88766432111       011 14555545552                  1                  123333 789


Q ss_pred             hcCCCCCCcEEEEEcCCCCCCCCCCCCCCC--CccCCCC--------------CCCCCCCCchhhhHhhhccCCCccccC
Q psy15698        209 DLGIRGSGVKVAVFDTGLSSGHTGFNNVAE--RTDWTNE--------------NTLEDKLGHGTFVAGLIASSQRCLGFA  272 (577)
Q Consensus       209 ~~g~~G~gV~VaViDtGid~~Hpdl~~~~~--~~~~~~~--------------~~~~D~~gHGT~VAGiIag~~~~~GvA  272 (577)
                      +.+++|+||+||||||||+.+||+|.+...  ..++...              ....|..||||||||+|+|.....|||
T Consensus       140 ~~~~~G~gv~VaViDtGid~~Hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~~~GvA  219 (471)
T 3t41_A          140 DDLPKHANTKIAIIDTGVMKNHDDLKNNFSTDSKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGKLIGVA  219 (471)
T ss_dssp             GGCCSSCCCCEEEEESCCCTTCTTTTTTBCTTCEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSSSBCSS
T ss_pred             hccCCCCCcEEEEEeCCCCCCChhHhcCcccCCcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCceeEEC
Confidence            999999999999999999999999995322  1222211              145778899999999999876789999


Q ss_pred             CCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCC---------------CCCHHHHHHHHHHHcCCcEE
Q psy15698        273 PDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPD---------------FMDFPFVDKVWELTANRVIL  337 (577)
Q Consensus       273 P~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~---------------~~~~~~~~ai~~a~~~gilv  337 (577)
                      |+|+|+.+|+++. +.+..+++++||+||++++++|||||||...               .....+.+++.++.++|++|
T Consensus       220 p~a~l~~~kv~~~-~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~v  298 (471)
T 3t41_A          220 PNNKFTMYRVFGS-KKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIV  298 (471)
T ss_dssp             TTSCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred             CCCeEEEEEeccC-CCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEE
Confidence            9999999999987 5678889999999999999999999999731               11256788888999999999


Q ss_pred             EEecCCCCCCCCC----------------CCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCC
Q psy15698        338 ISAIGNDGPLYGT----------------LNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGS  401 (577)
Q Consensus       338 V~AAGN~g~~~~~----------------~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~  401 (577)
                      |+||||+|.+.+.                +.+|+..+++|+|||++.++.++.||++|+..           |||+|||+
T Consensus       299 V~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~~~~a~fS~~G~~~-----------~di~APG~  367 (471)
T 3t41_A          299 VAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQKSNLSEFSNFGMNY-----------TDIAAPGG  367 (471)
T ss_dssp             EEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTTSSBCTTCCBCTTT-----------CCEEEECC
T ss_pred             EEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCCCCCCCccCCCCCC-----------CeEEecCC
Confidence            9999999975432                45899999999999999999999999999753           99999998


Q ss_pred             c----------------------eec----------CcCCcccccCCccccccccccCCC-cccHHHHHHHHhhcceecC
Q psy15698        402 A----------------------VRG----------PSTNGECQYMWPYCTQPLYHGAIP-IIVNVTILNGMGVVGKILE  448 (577)
Q Consensus       402 ~----------------------I~s----------sGTS~A~P~VaG~a~~aL~~~~~P-~l~~~~i~~~l~~ta~~~~  448 (577)
                      +                      |.+          +|||||||+|+|  ++||+++++| .+++.+|+.+|..||...+
T Consensus       368 ~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~~~~~~sGTS~AaP~VAG--~aAll~~~~p~~~~~~~v~~~L~~tA~~~~  445 (471)
T 3t41_A          368 SFAYLNQFGVDKWMNEGYMHKENILTTANNGRYIYQAGTALATPKVSG--ALALIIDKYHLEKHPDKAIELLYQHGTSKN  445 (471)
T ss_dssp             CCHHHHHHHHHHHHHTTTHHHHSEEEECTTSSEEEECSHHHHHHHHHH--HHHHHHHHHTCTTCHHHHHHHHHHHSBCCS
T ss_pred             CcccccccccccccccccccCceeEecCCCCCEEeecchHHHHHHHHH--HHHHHHHhccCCCCHHHHHHHHHHhCCCCC
Confidence            7                      543          799999999999  7799999999 8999999999999999877


Q ss_pred             CCccccCCCCCC
Q psy15698        449 RPKWYPYLPHNG  460 (577)
Q Consensus       449 ~~~~~p~~~~~g  460 (577)
                      . .++..+|++-
T Consensus       446 ~-~~~~~~G~G~  456 (471)
T 3t41_A          446 N-KPFSRYGHGE  456 (471)
T ss_dssp             C-CCHHHHTTCB
T ss_pred             C-CCcCccccCh
Confidence            5 7777767643


No 5  
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00  E-value=5.7e-51  Score=456.84  Aligned_cols=316  Identities=20%  Similarity=0.172  Sum_probs=56.9

Q ss_pred             cccceeEEEEcCCCChhHHHHHH---HHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEe
Q psy15698         51 NLHKEFIVTFRGYYKSAARSRYI---AAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVT  127 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~~~~~i---~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Ve  127 (577)
                      .++++|||+||+....+..+..+   .+.+.+.  ....++.      +.|...|++|.++++++.+++|+++|+|++||
T Consensus        73 ~ipg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~--g~~~~v~------~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Ve  144 (692)
T 2p4e_P           73 RLPGTYVVVLKEETHLSQSERTARRLQAQAARR--GYLTKIL------HVFHGLLPGFLVKMSGDLLELALKLPHVDYIE  144 (692)
T ss_dssp             EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT--TCCCEEE------EEECSSSCEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred             cCCCcEEEEECCCCCHHHHHHHHHHHHHHHhhc--cccccee------eEeeccccEEEEEeCHHHHHHHHcCCCceEEE
Confidence            89999999999998876554432   2222222  1123444      34667899999999999999999999999999


Q ss_pred             cCeEEEcccCccccccCCCCCCCCCCCCccccccccccccccccccccccccccccccccccccccCcchhhhccCchHH
Q psy15698        128 PQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGVQSQFWQATGRLTSRRLLKTVPRQITSILQANTL  207 (577)
Q Consensus       128 p~~~~~~~~~~~~~~~~g~~~~~p~nd~~~~~~w~~~~~~~~~~~~~~~~~w~~~~~~~~r~~~~~~p~~~~~~i~~~~~  207 (577)
                      |++.+....                      .+|                  +. .++..+.             .....
T Consensus       145 pd~~v~~~~----------------------~pW------------------gL-~~i~~~~-------------~~~~~  170 (692)
T 2p4e_P          145 EDSSVFAQS----------------------IPW------------------NL-ERITPPR-------------YRADE  170 (692)
T ss_dssp             EEEEEEEC------------------------------------------------------------------------
T ss_pred             eccccccCC----------------------CCc------------------ch-hhccccc-------------ccccc
Confidence            999875310                      123                  22 1111110             01236


Q ss_pred             HhcCCCCCCcEEEEEcCCCCCCCCCCCCCCC--CccCCCC-------CCCCCCCCchhhhHhhhccCCCccccCCCCcEe
Q psy15698        208 WDLGIRGSGVKVAVFDTGLSSGHTGFNNVAE--RTDWTNE-------NTLEDKLGHGTFVAGLIASSQRCLGFAPDAELH  278 (577)
Q Consensus       208 w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~--~~~~~~~-------~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~  278 (577)
                      |..+.+|+||+||||||||+.+||+|.+...  ++++..+       ....|.+||||||||||+|..  .||||+|+|+
T Consensus       171 w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~~~~~~~~~d~dg~~~~~~~~D~~GHGTHVAGiIAg~~--~GVAP~A~L~  248 (692)
T 2p4e_P          171 YQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD--AGVAKGASMR  248 (692)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCCCCCCcEEEEEcCCCCCCChhhcCceEecccccccCCCCCcccCCCCCCCCcHHHhhhHhhcCC--CccCCCCEEE
Confidence            8888999999999999999999999996443  2222211       234678899999999999864  8999999999


Q ss_pred             EEEEecCCCCCchHHHHHHHHHHHHC------CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCC
Q psy15698        279 IFRVFTNQQVSYTSWFLDAFNYAILK------KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLN  352 (577)
Q Consensus       279 ~~kv~~~~g~~~~~~~~~ai~~a~~~------g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~  352 (577)
                      ++|+++..+.++.+.++++|+|++++      +++|||||||+..  +..+.+++.++.++|+++|+||||+|.+. ...
T Consensus       249 ~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~--s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~-~~~  325 (692)
T 2p4e_P          249 SLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY--SRVLNAACQRLARAGVVLVTAAGNFRDDA-CLY  325 (692)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             EEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC--cHHHHHHHHHHHHCCCEEEEECCCCCCCC-Ccc
Confidence            99999988888889999999999985      8999999999763  56788899999999999999999999753 345


Q ss_pred             CCCCCCCeEEEeeecCCCCccC----CCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcccccCC
Q psy15698        353 NPADQMDVIGVGGINFEDQIAK----FSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMW  416 (577)
Q Consensus       353 ~Pa~~~~vI~VGA~~~~~~~a~----fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~Va  416 (577)
                      +|+..+++|+|||++.++.++.    |||||+.            |||+|||++|.+            +|||||+|||+
T Consensus       326 sPA~~~~vItVGA~d~~~~~a~~ss~fSn~G~~------------vDI~APG~~I~St~~~~~~~y~~~SGTSmAAPhVA  393 (692)
T 2p4e_P          326 SPASAPEVITVGATNAQDQPVTLGTLGTNFGRC------------VDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAHVA  393 (692)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CcccCCCEEEEEEEcCCCCccccccccCCCCCc------------eeEEecCCcEEeeccCCCCceEeccchHHHHHHHH
Confidence            8999999999999999999988    8999964            999999999964            79999999999


Q ss_pred             ccccccccccCCCcccHHHHHHHHhhcceec
Q psy15698        417 PYCTQPLYHGAIPIIVNVTILNGMGVVGKIL  447 (577)
Q Consensus       417 G~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~  447 (577)
                      |  ++||+++.+|.+++.+|++.|..||...
T Consensus       394 G--~aALlls~~P~ltp~qVk~~L~~tA~~~  422 (692)
T 2p4e_P          394 G--IAAMMLSAEPELTLAELRQRLIHFSAKD  422 (692)
T ss_dssp             -------------------------------
T ss_pred             H--HHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence            9  7799999999999999999999988643


No 6  
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00  E-value=1.8e-48  Score=398.59  Aligned_cols=230  Identities=25%  Similarity=0.330  Sum_probs=200.2

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC-CCCCCCCchhhhHhhhcc----CCCccccCCC
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN-TLEDKLGHGTFVAGLIAS----SQRCLGFAPD  274 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~-~~~D~~gHGT~VAGiIag----~~~~~GvAP~  274 (577)
                      .|+++.+|+.+.+|+||+||||||||+.+||+|.+ +..+++|.++. .+.|..+|||||||||++    ..++.||||+
T Consensus        17 ~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~   96 (280)
T 1dbi_A           17 NTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDPMDLNNHGTHVAGIAAAETNNATGIAGMAPN   96 (280)
T ss_dssp             GGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTTEEEEEETTTTBSCCCCSSSHHHHHHHHHHCCCSSSSSCCCSSSS
T ss_pred             hcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccCcccceeccCCCCCCCCCCCcHHHHHHHHhCcCCCCCcceEeCCC
Confidence            47999999998888899999999999999999985 45567776543 457888999999999998    2457899999


Q ss_pred             CcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCC
Q psy15698        275 AELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNP  354 (577)
Q Consensus       275 A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~P  354 (577)
                      |+|+.+|+++..+.+..+.++++|+||++++++|||||||.... ...+.+++.++.++|+++|+||||+|..  ...+|
T Consensus        97 a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~-~~~~~~ai~~a~~~gilvV~AAGN~g~~--~~~~P  173 (280)
T 1dbi_A           97 TRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDCH-TTTLENAVNYAWNKGSVVVAAAGNNGSS--TTFEP  173 (280)
T ss_dssp             CEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCCC-CHHHHHHHHHHHHTTCEEEEECCBC----------
T ss_pred             CEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCCC-CHHHHHHHHHHHHCCCEEEEECCCCCCC--CCCCc
Confidence            99999999998888889999999999999999999999998753 6789999999999999999999999973  45799


Q ss_pred             CCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCcccccccc
Q psy15698        355 ADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLY  424 (577)
Q Consensus       355 a~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~  424 (577)
                      +..+++|+|||++..++++.||++|+.            |||+|||++|.+          +|||||||+|+|  ++||+
T Consensus       174 a~~~~vi~Vga~~~~~~~~~~S~~G~~------------~dv~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAll  239 (280)
T 1dbi_A          174 ASYENVIAVGAVDQYDRLASFSNYGTW------------VDVVAPGVDIVSTITGNRYAYMSGTSMASPHVAG--LAALL  239 (280)
T ss_dssp             -CCTTSEEEEEECTTSCBCTTBCCSTT------------CCEEEECSSEEEEETTTEEEEECSHHHHHHHHHH--HHHHH
T ss_pred             cccCCeEEEEeeCCCCCcCCCCCCCCC------------ceEEEecCCeEeecCCCCEEEccCHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999976            999999999974          799999999999  67888


Q ss_pred             ccCCCcccHHHHHHHHhhcceecCC
Q psy15698        425 HGAIPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       425 ~~~~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                      ++  |.+++.+|+++|..||+.++.
T Consensus       240 ~~--p~~t~~~v~~~L~~ta~~~~~  262 (280)
T 1dbi_A          240 AS--QGRNNIEIRQAIEQTADKISG  262 (280)
T ss_dssp             HH--TTCCHHHHHHHHHHTSBCCTT
T ss_pred             HC--CCCCHHHHHHHHHHhCccCCC
Confidence            75  999999999999999998874


No 7  
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00  E-value=2.2e-48  Score=396.84  Aligned_cols=240  Identities=27%  Similarity=0.389  Sum_probs=214.5

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCC-CCCCCCCchhhhHhhhcc---CCCccccCCCC
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNEN-TLEDKLGHGTFVAGLIAS---SQRCLGFAPDA  275 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~-~~~D~~gHGT~VAGiIag---~~~~~GvAP~A  275 (577)
                      +.|+++.+|+.+++|+||+||||||||+.+||+|+ +..+.+|.... ...|..+|||||||+|++   +.++.||||+|
T Consensus         9 ~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-~~~g~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~g~~GvAp~a   87 (274)
T 1r0r_E            9 PLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-VVGGASFVAGEAYNTDGNGHGTHVAGTVAALDNTTGVLGVAPSV   87 (274)
T ss_dssp             HHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-EEEEEECSTTCCTTCCSSSHHHHHHHHHHCCSSSSBCCCSSTTS
T ss_pred             hhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-CCCCccccCCCCCCCCCCCCHHHHHHHHHccCCCCceEEECCCC
Confidence            46899999999999999999999999999999995 44556666543 357888999999999998   35679999999


Q ss_pred             cEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCC--CCCCCC
Q psy15698        276 ELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPL--YGTLNN  353 (577)
Q Consensus       276 ~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~--~~~~~~  353 (577)
                      +|+.+|+++..+.+..+.++++|+|+++++++|||||||.... ...+.++++++.++|+++|+||||+|..  ...+.+
T Consensus        88 ~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~  166 (274)
T 1r0r_E           88 SLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGASG-STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGY  166 (274)
T ss_dssp             EEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSSC-CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCB
T ss_pred             EEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCCC-cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccC
Confidence            9999999998888888999999999999999999999998753 6789999999999999999999999975  235779


Q ss_pred             CCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccc
Q psy15698        354 PADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPL  423 (577)
Q Consensus       354 Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL  423 (577)
                      |+..+++|+||+++.++.++.||++|+.            |||+|||++|.+          +|||||||+|+|  ++||
T Consensus       167 Pa~~~~vi~Vga~~~~~~~~~~S~~G~~------------~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAl  232 (274)
T 1r0r_E          167 PAKYDSVIAVGAVDSNSNRASFSSVGAE------------LEVMAPGAGVYSTYPTNTYATLNGTSMASPHVAG--AAAL  232 (274)
T ss_dssp             TTTSTTSEEEEEECTTSCBCTTCCCSTT------------EEEEEECSSEEEEETTTEEEEECSHHHHHHHHHH--HHHH
T ss_pred             CCCCCcEEEEEEecCCCCcCccCCCCCC------------ceEEeCCCCeEeecCCCCEEEeccHHHHHHHHHH--HHHH
Confidence            9999999999999999999999999975            999999999974          799999999999  7799


Q ss_pred             cccCCCcccHHHHHHHHhhcceecCCCccccCCCC
Q psy15698        424 YHGAIPIIVNVTILNGMGVVGKILERPKWYPYLPH  458 (577)
Q Consensus       424 ~~~~~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~  458 (577)
                      +++.+|.+++.+|+++|..||+.++   .+..+|+
T Consensus       233 l~~~~p~lt~~~v~~~L~~tA~~~g---~~~~~G~  264 (274)
T 1r0r_E          233 ILSKHPNLSASQVRNRLSSTATYLG---SSFYYGK  264 (274)
T ss_dssp             HHHHSTTCCHHHHHHHHHHTCBCCS---CHHHHTT
T ss_pred             HHHHCCCCCHHHHHHHHHHhCcccC---CCCCccc
Confidence            9999999999999999999999886   3444555


No 8  
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00  E-value=3.8e-48  Score=396.50  Aligned_cols=244  Identities=30%  Similarity=0.433  Sum_probs=215.2

Q ss_pred             cchhhhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCC--CCCCCCCchhhhHhhhcc---CCCcc
Q psy15698        195 PRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNEN--TLEDKLGHGTFVAGLIAS---SQRCL  269 (577)
Q Consensus       195 p~~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~--~~~D~~gHGT~VAGiIag---~~~~~  269 (577)
                      +|.+ +.|+++.+|+.+++|+||+||||||||+.+||+|+ ...+++|....  ...|..+|||||||+|++   +.++.
T Consensus         5 ~w~l-~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-~~~g~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~g~~   82 (281)
T 1to2_E            5 PYGV-SQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK-VAGGASMVPSETNPFQDNNSHGTHVAGTVAALNNSIGVL   82 (281)
T ss_dssp             CHHH-HHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-EEEEEECCTTCCCTTCCSSSHHHHHHHHHHCCSSSSSBC
T ss_pred             Ccch-hhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-CcCCccccCCCCCCCCCCCCcHHHHHHHHhccCCCCcce
Confidence            3444 46899999999999999999999999999999996 33455565433  236888999999999998   34679


Q ss_pred             ccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCC--
Q psy15698        270 GFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPL--  347 (577)
Q Consensus       270 GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~--  347 (577)
                      ||||+|+|+.+|+++..+.+..+.++++|+|+++++++|||||||.+.. ...+.+++.++.++|+++|+||||+|..  
T Consensus        83 GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~  161 (281)
T 1to2_E           83 GVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPSG-SAALKAAVDKAVASGVVVVAAAGNEGTSGS  161 (281)
T ss_dssp             CSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCSCCCCTT
T ss_pred             eeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCCCC-CHHHHHHHHHHHHCCCEEEEECCCCCCCCC
Confidence            9999999999999998887888999999999999999999999998753 6789999999999999999999999975  


Q ss_pred             CCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCc
Q psy15698        348 YGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWP  417 (577)
Q Consensus       348 ~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG  417 (577)
                      ...+.+|+..+++|+|||++.++.++.||++|+.            |||+|||.+|.+          +|||||||+|+|
T Consensus       162 ~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~~------------~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG  229 (281)
T 1to2_E          162 SSTVGYPGKYPSVIAVGAVDSSNQRASFSSVGPE------------LDVMAPGVSIQSTLPGNKYGAYNGTSMASPHVAG  229 (281)
T ss_dssp             SCCCCBTTTSTTSEEEEEECTTSCBCTTCCCSTT------------CCEEEECSSEEEEETTTEEEEECBHHHHHHHHHH
T ss_pred             CCccccCcCCCCEEEEEEecCCCCcCCcCCCCCC------------ceEEecCCCeEeecCCCCEEecCcHHHHHHHHHH
Confidence            2357799999999999999999999999999976            999999999974          799999999999


Q ss_pred             cccccccccCCCcccHHHHHHHHhhcceecCCCccccCCCC
Q psy15698        418 YCTQPLYHGAIPIIVNVTILNGMGVVGKILERPKWYPYLPH  458 (577)
Q Consensus       418 ~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~  458 (577)
                        ++||+++.+|.+++.+|+++|..||..++   .+..+|+
T Consensus       230 --~aAll~~~~p~lt~~~v~~~L~~tA~~~g---~~~~~G~  265 (281)
T 1to2_E          230 --AAALILSKHPNWTNTQVRSSLENTTTKLG---DSFYYGK  265 (281)
T ss_dssp             --HHHHHHHHSTTCCHHHHHHHHHTTCBCCS---CHHHHTT
T ss_pred             --HHHHHHHhCCCCCHHHHHHHHHhhCcccC---CCCCccc
Confidence              77999999999999999999999999886   3444455


No 9  
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00  E-value=2.3e-48  Score=403.08  Aligned_cols=257  Identities=23%  Similarity=0.290  Sum_probs=222.9

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCC-----CCCCCCCCchhhhHhhhccC-----CCc
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNE-----NTLEDKLGHGTFVAGLIASS-----QRC  268 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~-----~~~~D~~gHGT~VAGiIag~-----~~~  268 (577)
                      +.|+++++|+.+++|+||+||||||||+.+||+|.+ +...++|...     ....|..||||||||||++.     .++
T Consensus        11 ~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~n~~g~   90 (310)
T 2ixt_A           11 KAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATTPINNSCTDRNGHGTHVAGTALADGGSDQAGI   90 (310)
T ss_dssp             HHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTTEEEEEESSSSSSCEETCCCCSSSHHHHHHHHHHCBCCTTSCSC
T ss_pred             hhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhcccccccccCCCCCCCCCCCCCCCCHHHHHHHHhccCCCCCCce
Confidence            458899999999999999999999999999999985 3455677654     23567889999999999883     457


Q ss_pred             cccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCC-----cEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCC
Q psy15698        269 LGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKM-----DVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGN  343 (577)
Q Consensus       269 ~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~-----~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN  343 (577)
                      .||||+|+|+.+|+++..+.+..+.++++|+|++++++     +|||||||.... ...+.+++.++.++|+++|+||||
T Consensus        91 ~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~AAGN  169 (310)
T 2ixt_A           91 YGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSAN-NSLISSAVNYAYSKGVLIVAAAGN  169 (310)
T ss_dssp             BCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSSC-CHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             EEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEEcCCCCCC-CHHHHHHHHHHHhCCcEEEEcCCC
Confidence            89999999999999998888889999999999999887     999999998753 678899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCeEEEeeec---CCC--CccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcC
Q psy15698        344 DGPLYGTLNNPADQMDVIGVGGIN---FED--QIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PST  408 (577)
Q Consensus       344 ~g~~~~~~~~Pa~~~~vI~VGA~~---~~~--~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGT  408 (577)
                      +|....++.+|+..+++|+|||++   .++  .++.||++|+.........++.||||+|||++|.+          +||
T Consensus       170 ~g~~~~~~~~Pa~~~~vi~Vga~~~~~~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~~~~~~~sGT  249 (310)
T 2ixt_A          170 SGYSQGTIGYPGALPNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNGGYNTISGT  249 (310)
T ss_dssp             CCSSTTCCCBTTTSTTSEEEEEEEEEEETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTTSSEEEECSH
T ss_pred             CCCCCCCCCCcccCCCeeEEEeccccccCCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCCCCEEeeccH
Confidence            998666788999999999999999   777  89999999975322112234568999999999974          799


Q ss_pred             CcccccCCccccccccccCCCcccHHHHHHHHhhcceecC-------CCccccCCCCC
Q psy15698        409 NGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILE-------RPKWYPYLPHN  459 (577)
Q Consensus       409 S~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~-------~~~~~p~~~~~  459 (577)
                      |||||+|+|  ++||+++.+|.+++.+|+++|..||+..+       .++|++.+|++
T Consensus       250 S~AaP~vaG--~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G~G  305 (310)
T 2ixt_A          250 SMATPHVSG--LAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASGFG  305 (310)
T ss_dssp             HHHHHHHHH--HHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTBTC
T ss_pred             HHHHHHHHH--HHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCccccccc
Confidence            999999999  77999999999999999999999999877       46777777764


No 10 
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00  E-value=6.8e-48  Score=392.17  Aligned_cols=237  Identities=31%  Similarity=0.388  Sum_probs=212.6

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCCCccCCCCC-CCCCCCCchhhhHhhhcc---CCCccccCCCC
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNEN-TLEDKLGHGTFVAGLIAS---SQRCLGFAPDA  275 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~-~~~D~~gHGT~VAGiIag---~~~~~GvAP~A  275 (577)
                      +.|+++++|+.+++|+||+|+|||||| .+||+|+ +..+++|..+. ...|..||||||||+|++   +.++.||||+|
T Consensus         9 ~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~~~GvAp~a   86 (269)
T 1gci_A            9 SRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-IRGGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSA   86 (269)
T ss_dssp             HHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-EEEEEECSTTCCSCSCSSSHHHHHHHHHHCCCSSSBCCCSSTTC
T ss_pred             hhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-ccCCcccCCCCCCCCCCCCChHHHHHHHhcCcCCCCcEEeCCCC
Confidence            468999999999999999999999999 7999995 44566666543 467888999999999998   34678999999


Q ss_pred             cEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCC
Q psy15698        276 ELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPA  355 (577)
Q Consensus       276 ~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa  355 (577)
                      +|+.+|+++..+.+..+.++++|+|+++++++|||||||.+.. ...+.+++.++.++|+++|+||||+|..  .+.+|+
T Consensus        87 ~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~AaGN~g~~--~~~~Pa  163 (269)
T 1gci_A           87 ELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSP-SATLEQAVNSATSRGVLVVAASGNSGAG--SISYPA  163 (269)
T ss_dssp             EEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSSC-CHHHHHHHHHHHHTTCEEEEECCSSCCS--SCCBTT
T ss_pred             EEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC-CHHHHHHHHHHHHCCCEEEEecCCCCCC--CCcCCc
Confidence            9999999998888888999999999999999999999998753 6789999999999999999999999974  478999


Q ss_pred             CCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccc
Q psy15698        356 DQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYH  425 (577)
Q Consensus       356 ~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~  425 (577)
                      .++++|+||+++.++.++.||++|+.            +||+|||++|.+          +|||||||+|+|  ++||++
T Consensus       164 ~~~~vi~Vga~~~~~~~~~~S~~G~~------------~di~APG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAll~  229 (269)
T 1gci_A          164 RYANAMAVGATDQNNNRASFSQYGAG------------LDIVAPGVNVQSTYPGSTYASLNGTSMATPHVAG--AAALVK  229 (269)
T ss_dssp             TSTTEEEEEEECTTSCBCTTCCCSTT------------EEEEEECSSEEEEETTTEEEEECSHHHHHHHHHH--HHHHHH
T ss_pred             cCCCeEEEEeecCCCCCCCCCCCCCC------------cceEecCCCeEeecCCCCEEEcCcHHHHHHHHHH--HHHHHH
Confidence            99999999999999999999999976            999999999874          799999999999  779999


Q ss_pred             cCCCcccHHHHHHHHhhcceecCCCccccCCCC
Q psy15698        426 GAIPIIVNVTILNGMGVVGKILERPKWYPYLPH  458 (577)
Q Consensus       426 ~~~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~  458 (577)
                      +.+|.+++.+|+++|..||..++   .+..+|+
T Consensus       230 ~~~p~~t~~~v~~~L~~tA~~~g---~~~~~G~  259 (269)
T 1gci_A          230 QKNPSWSNVQIRNHLKNTATSLG---STNLYGS  259 (269)
T ss_dssp             HHCTTCCHHHHHHHHHHTSBCCS---CHHHHTT
T ss_pred             HhCCCCCHHHHHHHHHHhCccCC---CCCCccc
Confidence            99999999999999999999886   3444455


No 11 
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00  E-value=1e-47  Score=392.84  Aligned_cols=231  Identities=26%  Similarity=0.334  Sum_probs=207.3

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC-CCCCCCCchhhhHhhhcc----CCCccccCCC
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN-TLEDKLGHGTFVAGLIAS----SQRCLGFAPD  274 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~-~~~D~~gHGT~VAGiIag----~~~~~GvAP~  274 (577)
                      .|+++.+|+.+ +|+||+||||||||+.+||+|.+ +..+++|...+ .+.|..+|||||||||++    +.++.||||+
T Consensus        17 ~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~n~~g~~GvAp~   95 (279)
T 1thm_A           17 KIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCAGIAAAVTNNSTGIAGTAPK   95 (279)
T ss_dssp             HTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTTEEEEEETTTTBSCCCCSSSHHHHHHHHHHCCCSSSSSCCCSSTT
T ss_pred             hCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcCccccccccCCCCCCCCCCCcHHHHHHHHhCccCCCCccEEeCCC
Confidence            58999999996 89999999999999999999995 44567776543 457888999999999998    3467899999


Q ss_pred             CcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCC
Q psy15698        275 AELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNP  354 (577)
Q Consensus       275 A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~P  354 (577)
                      |+|+.+|+++..+.++.+.++++|+||++++++|||||||.... ...+.+++.++.++|+++|+||||+|..  ...+|
T Consensus        96 a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~-~~~l~~ai~~a~~~gvlvV~AAGN~g~~--~~~~P  172 (279)
T 1thm_A           96 ASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTVG-NSGLQQAVNYAWNKGSVVVAAAGNAGNT--APNYP  172 (279)
T ss_dssp             CEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSSC-CHHHHHHHHHHHHTTCEEEEECCSSSSC--CCCBT
T ss_pred             CEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCCC-CHHHHHHHHHHHHCCCEEEEeCCCCCCC--CCCCc
Confidence            99999999998888888999999999999999999999998753 6789999999999999999999999974  45689


Q ss_pred             CCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCcccccccc
Q psy15698        355 ADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLY  424 (577)
Q Consensus       355 a~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~  424 (577)
                      +..+++|+|||++.++.++.||++|+.            |||+|||++|.+          +|||||||+|+|  ++||+
T Consensus       173 a~~~~vi~Vga~~~~~~~~~fS~~G~~------------~dv~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG--~aAll  238 (279)
T 1thm_A          173 AYYSNAIAVASTDQNDNKSSFSTYGSW------------VDVAAPGSSIYSTYPTSTYASLSGTSMATPHVAG--VAGLL  238 (279)
T ss_dssp             TTSTTEEEEEEECTTSCBCTTCCCCTT------------CCEEEECSSEEEEETTTEEEEECSHHHHHHHHHH--HHHHH
T ss_pred             ccCCCeEEEEEeCCCCCcCCcCCCCCc------------eEEEEcCCCeEEEeCCCCEEEcccHHHHHHHHHH--HHHHH
Confidence            999999999999999999999999976            999999999974          799999999999  66888


Q ss_pred             ccCCCcccHHHHHHHHhhcceecCCCc
Q psy15698        425 HGAIPIIVNVTILNGMGVVGKILERPK  451 (577)
Q Consensus       425 ~~~~P~l~~~~i~~~l~~ta~~~~~~~  451 (577)
                        .+|.+++.+|+++|..||+.++.++
T Consensus       239 --~~p~~t~~~v~~~L~~ta~~~~~~~  263 (279)
T 1thm_A          239 --ASQGRSASNIRAAIENTADKISGTG  263 (279)
T ss_dssp             --HTTTCCHHHHHHHHHHTCBCCTTBT
T ss_pred             --HCCCcCHHHHHHHHHHhCccCCCCC
Confidence              5799999999999999999987554


No 12 
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00  E-value=9.6e-48  Score=400.45  Aligned_cols=240  Identities=26%  Similarity=0.366  Sum_probs=215.3

Q ss_pred             hccCchHHHhcCCCCC--CcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC------CCCCCCCchhhhHhhhcc---CCC
Q psy15698        200 SILQANTLWDLGIRGS--GVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN------TLEDKLGHGTFVAGLIAS---SQR  267 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~--gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~------~~~D~~gHGT~VAGiIag---~~~  267 (577)
                      +.|+++++|+.+ +|+  ||+||||||||+.+||+|.+ +..+.+|....      ...|..||||||||||++   +.+
T Consensus        13 ~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~n~~g   91 (320)
T 2z30_A           13 ERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAANIAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALNNDIG   91 (320)
T ss_dssp             HHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGGEEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCSSSBS
T ss_pred             hhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcccccCccccCCccCCCCCCCCCCCCCHHHHHHHHHcccCCCc
Confidence            358999999998 999  99999999999999999984 44455565432      246788999999999998   346


Q ss_pred             ccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHC--------------------CCcEEEeCCCCCCCCCHHHHHHH
Q psy15698        268 CLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILK--------------------KMDVLNLSIGGPDFMDFPFVDKV  327 (577)
Q Consensus       268 ~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~--------------------g~~ViN~S~G~~~~~~~~~~~ai  327 (577)
                      +.||||+|+|+.+|+++..+.+..+.++++|+||+++                    +++|||||||.... ...+.+++
T Consensus        92 ~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-~~~~~~ai  170 (320)
T 2z30_A           92 VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-DSYLYDMI  170 (320)
T ss_dssp             CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC-CHHHHHHH
T ss_pred             eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccccccccccccCCceEEEecCCCCCC-CHHHHHHH
Confidence            7999999999999999988888889999999999987                    99999999998763 67889999


Q ss_pred             HHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec--
Q psy15698        328 WELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG--  405 (577)
Q Consensus       328 ~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s--  405 (577)
                      .++.++|+++|+||||+|..  ...+|+..+++|+|||++.++.++.||++|              |+|+|||.+|++  
T Consensus       171 ~~a~~~gi~vV~AAGN~g~~--~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g--------------~~v~APG~~i~s~~  234 (320)
T 2z30_A          171 IQAYNAGIVIVAASGNEGAP--SPSYPAAYPEVIAVGAIDSNDNIASFSNRQ--------------PEVSAPGVDILSTY  234 (320)
T ss_dssp             HHHHHTTCEEEEECCSSCCS--SCCBTTTSTTEEEEEEECTTSCBCTTSCSS--------------CSEEEECSSEEEEE
T ss_pred             HHHHHCCCEEEEeCCCCCCC--CCCCcccCCCeEEEEeeCCCCCcCcccCCC--------------CCEEeCCCCeEEec
Confidence            99999999999999999974  567999999999999999999999999999              678999999974  


Q ss_pred             --------CcCCcccccCCccccccccccCC-------------CcccHHHHHHHHhhcceecCCCccccCCCCC
Q psy15698        406 --------PSTNGECQYMWPYCTQPLYHGAI-------------PIIVNVTILNGMGVVGKILERPKWYPYLPHN  459 (577)
Q Consensus       406 --------sGTS~A~P~VaG~a~~aL~~~~~-------------P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~~  459 (577)
                              +|||||||+|+|  ++||+++.+             |.+++.+|+++|..||..++.++|+..+|++
T Consensus       235 ~~~~~~~~sGTS~AaP~vaG--~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~g~~~~~G~G  307 (320)
T 2z30_A          235 PDDSYETLMGTAMATPHVSG--VVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTGWDADYGYG  307 (320)
T ss_dssp             TTTEEEEECSHHHHHHHHHH--HHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSSSSBTTTBTC
T ss_pred             cCCCeEeccCHHHHHHHHHH--HHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCCCCCCCcCCc
Confidence                    799999999999  779999998             9999999999999999999999999888874


No 13 
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00  E-value=7.1e-47  Score=395.07  Aligned_cols=242  Identities=24%  Similarity=0.398  Sum_probs=208.0

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCC-----CCCCCCCCchhhhHhhhcc---CCCccc
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNE-----NTLEDKLGHGTFVAGLIAS---SQRCLG  270 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~-----~~~~D~~gHGT~VAGiIag---~~~~~G  270 (577)
                      +.|+++.+|+.+++|+||+||||||||+.+||+|.+ +..+++|..+     ....|..||||||||||+|   +.++.|
T Consensus        26 ~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiia~~~~~~g~~G  105 (327)
T 2x8j_A           26 EIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAERIIGGVNLTTDYGGDETNFSDNNGHGTHVAGTVAAAETGSGVVG  105 (327)
T ss_dssp             HHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGGEEEEEECSSGGGGCTTCCCCSSSHHHHHHHHHHCCCCSSBCCC
T ss_pred             hhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhcccCCccccCCCCCCCCCCCCCCCchHHHHHHHhccCCCCCcEe
Confidence            468999999999999999999999999999999984 4445666643     1356888999999999998   456899


Q ss_pred             cCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH------CCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCC
Q psy15698        271 FAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL------KKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGND  344 (577)
Q Consensus       271 vAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~------~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~  344 (577)
                      |||+|+|+.+|+++..+.+..+++++||+||++      .+++|||||||.+.. ...+.+++.++.++|+++|+||||+
T Consensus       106 vAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~-~~~~~~ai~~a~~~gi~vV~AAGN~  184 (327)
T 2x8j_A          106 VAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLGGPTD-SEELHDAVKYAVSNNVSVVCAAGNE  184 (327)
T ss_dssp             SSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEEECEEBSCC-CHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred             eCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEEECCCcCCC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            999999999999998887888999999999999      899999999998753 6789999999999999999999999


Q ss_pred             CCCC---CCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcc
Q psy15698        345 GPLY---GTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGE  411 (577)
Q Consensus       345 g~~~---~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A  411 (577)
                      |...   .++.+|+..+++|+|||++.++.++.||++|+.            |||+|||++|.+          +|||||
T Consensus       185 g~~~~~~~~~~~Pa~~~~vi~Vga~~~~~~~~~fS~~G~~------------~di~APG~~i~s~~~~~~~~~~sGTS~A  252 (327)
T 2x8j_A          185 GDGREDTNEFAYPAAYNEVIAVGAVDFDLRLSDFTNTNEE------------IDIVAPGVGIKSTYLDSGYAELSGTAMA  252 (327)
T ss_dssp             ---------TCBTTTSTTSEEEEEECTTCCBSCC---CCC------------CSEEEECSSEEEECSTTCEEEEESGGGT
T ss_pred             CCCCCCCCceeccccCCCEEEEEEECCCCCCCCccCCCCC------------ceEecCcCceEeecCCCCEEeecCHHHH
Confidence            9742   357899999999999999999999999999975            999999999975          699999


Q ss_pred             cccCCccccccccccC-----CCcccHHHHHHHHhhcceecCCCccccCCCC
Q psy15698        412 CQYMWPYCTQPLYHGA-----IPIIVNVTILNGMGVVGKILERPKWYPYLPH  458 (577)
Q Consensus       412 ~P~VaG~a~~aL~~~~-----~P~l~~~~i~~~l~~ta~~~~~~~~~p~~~~  458 (577)
                      ||+|+|  ++||+++.     +|.+++.+|+++|..||...+.  ++..+|+
T Consensus       253 aP~VaG--~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~--~~~~~G~  300 (327)
T 2x8j_A          253 APHVAG--ALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF--TAQAEGN  300 (327)
T ss_dssp             HHHHHH--HHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS--CHHHHTT
T ss_pred             HHHHHH--HHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC--CCCceee
Confidence            999999  77999999     9999999999999999998863  2344455


No 14 
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00  E-value=2e-46  Score=393.24  Aligned_cols=240  Identities=23%  Similarity=0.271  Sum_probs=208.6

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC---------------------------------
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN---------------------------------  246 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~---------------------------------  246 (577)
                      .|+++++|+.+++|+||+||||||||+ +||+|.. +..+++|..+.                                 
T Consensus        18 ~i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (340)
T 3lpc_A           18 GVKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPRK   96 (340)
T ss_dssp             SCCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCGGG
T ss_pred             CCCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccccCccccCCccccccCCCccCCccccccccccccccCCCCccc
Confidence            489999999999999999999999998 9999983 44445543220                                 


Q ss_pred             CCCCCCCchhhhHhhhcc----CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH----------CCCcEEEeC
Q psy15698        247 TLEDKLGHGTFVAGLIAS----SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL----------KKMDVLNLS  312 (577)
Q Consensus       247 ~~~D~~gHGT~VAGiIag----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~----------~g~~ViN~S  312 (577)
                      ...|..||||||||||+|    ..++.||||+|+|+.+|+++..+ +..+.++++|+|+++          .+++|||||
T Consensus        97 ~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~~v~~~~~-~~~~~~~~ai~~a~~~~~~~~~~~~~~~~Vin~S  175 (340)
T 3lpc_A           97 ERSDSSWHGSHVAGTIAAVTNNRIGVAGVAYGAKVVPVRALGRCG-GYDSDISDGLYWAAGGRIAGIPENRNPAKVINMS  175 (340)
T ss_dssp             SCBCCCCHHHHHHHHHHCCCSSSSSCCCTTTTSEEEEEECCBTTB-CCHHHHHHHHHHHHTCCCTTSCCCSSCCSEEEEC
T ss_pred             CCCCCCCCHHHHHHHHHccCCCCCcceeecCCCEEEEEEEecCCC-CcHHHHHHHHHHHhcccccccccccCCCeEEEeC
Confidence            135677899999999998    34679999999999999999876 678899999999998          899999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCc
Q psy15698        313 IGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRV  392 (577)
Q Consensus       313 ~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~  392 (577)
                      ||........+.+++.++.++|++||+||||+|... ...+|+..+++|+|||++.++.++.||++|+.           
T Consensus       176 ~G~~~~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~-~~~~Pa~~~~vi~Vga~~~~~~~~~~S~~g~~-----------  243 (340)
T 3lpc_A          176 LGSDGQCSYNAQTMIDRATRLGALVVVAAGNENQNA-SNTWPTSCNNVLSVGATTSRGIRASFSNYGVD-----------  243 (340)
T ss_dssp             CCEESCCCHHHHHHHHHHHHHTCEEEEECCSSSSBG-GGEETTTSSSCEEEEEECTTSSBCTTCCBSTT-----------
T ss_pred             cCCCCCcchhHHHHHHHHHhCCcEEEEeCCCCCCCC-CCcCCccCCceEEEecCCCCCCcCCCCCCCCC-----------
Confidence            998766678899999999999999999999999753 34689999999999999999999999999964           


Q ss_pred             cccEEecCCceec-----------------CcCCcccccCCccccccccccC-C---CcccHHHHHHHHhhcceecCCCc
Q psy15698        393 KPDIVTYGSAVRG-----------------PSTNGECQYMWPYCTQPLYHGA-I---PIIVNVTILNGMGVVGKILERPK  451 (577)
Q Consensus       393 kpDi~ApG~~I~s-----------------sGTS~A~P~VaG~a~~aL~~~~-~---P~l~~~~i~~~l~~ta~~~~~~~  451 (577)
                       |||+|||++|.+                 +|||||||+|+|  ++||+++. +   |.+++.+|+++|..||+... ..
T Consensus       244 -~di~ApG~~i~s~~~~~~~~~~~~~~~~~sGTS~AaP~vaG--~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~-~~  319 (340)
T 3lpc_A          244 -VDLAAPGQDILSTVDSGTRRPVSDAYSFMAGTSMATPHVSG--VAALVISAANSVNKNLTPAELKDVLVSTTSPFN-GR  319 (340)
T ss_dssp             -CCEEEECSSEEEEEESCSSSCCSEEEEEECSHHHHHHHHHH--HHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS-SC
T ss_pred             -ceEEecCCCeecccCCCCcCCCCCcceecccHhHHHHHHHH--HHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC-CC
Confidence             999999999974                 499999999999  77999887 5   99999999999999999875 44


Q ss_pred             cccCCCC
Q psy15698        452 WYPYLPH  458 (577)
Q Consensus       452 ~~p~~~~  458 (577)
                      ++..+|+
T Consensus       320 ~~~~~G~  326 (340)
T 3lpc_A          320 LDRALGS  326 (340)
T ss_dssp             CSSCCCS
T ss_pred             CCCCccc
Confidence            5655555


No 15 
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00  E-value=7.5e-46  Score=379.98  Aligned_cols=229  Identities=23%  Similarity=0.284  Sum_probs=206.5

Q ss_pred             cCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC-CCCCCCCchhhhHhhhccCCCccccCCCCcEeE
Q psy15698        202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN-TLEDKLGHGTFVAGLIASSQRCLGFAPDAELHI  279 (577)
Q Consensus       202 i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~-~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~  279 (577)
                      ++++.+|+.+++|+||+||||||||+.+||+|.+ +..+++|.... ...|..+|||||||+|++..  .||||+|+|+.
T Consensus        16 ~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~--~GvAp~a~l~~   93 (284)
T 1sh7_A           16 LPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGRSVSGYDFVDNDADSSDCNGHGTHVAGTIGGSQ--YGVAKNVNIVG   93 (284)
T ss_dssp             SSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTCEEEEEETTTTBSCCCCSSSHHHHHHHHHHCTT--TCSSTTCEEEE
T ss_pred             cCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCCccccccccCCCCCCCCCCCcHHHHHHHHhccc--CCcCCCCEEEE
Confidence            4667789999999999999999999999999985 44567777543 46788899999999999864  79999999999


Q ss_pred             EEEecCCCCCchHHHHHHHHHHHHC--CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCC
Q psy15698        280 FRVFTNQQVSYTSWFLDAFNYAILK--KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQ  357 (577)
Q Consensus       280 ~kv~~~~g~~~~~~~~~ai~~a~~~--g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~  357 (577)
                      +|+++..+.+..+.++++|+|++++  +++|||||||...  ...+.+++.++.++|++||+||||+|.+. ...+|+..
T Consensus        94 ~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~--~~~~~~ai~~a~~~gi~vV~AAGN~g~~~-~~~~Pa~~  170 (284)
T 1sh7_A           94 VRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ--STALDSAVQGAIQSGVSFMLAAGNSNADA-CNTSPARV  170 (284)
T ss_dssp             EECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC--CHHHHHHHHHHHHTTCEEEEECCSSSSBG-GGSBTTTC
T ss_pred             EEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC--CHHHHHHHHHHHHCCCEEEEECCcCCCCC-CccccccC
Confidence            9999988888899999999999974  7999999999874  68899999999999999999999999753 35689999


Q ss_pred             CCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccC
Q psy15698        358 MDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGA  427 (577)
Q Consensus       358 ~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~  427 (577)
                      +++|+|||++.++.++.||++|+.            +||+|||++|.+          +|||||||+|+|  ++||+++.
T Consensus       171 ~~vi~Vga~~~~~~~~~~S~~G~~------------~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAll~~~  236 (284)
T 1sh7_A          171 PSGVTVGSTTSSDSRSSFSNWGSC------------VDLFAPGSQIKSAWYDGGYKTISGTSMATPHVAG--VAALYLQE  236 (284)
T ss_dssp             TTSEEEEEECTTSBBCTTCCBSTT------------CCEEEECSSEEEECTTSSEEEECSHHHHHHHHHH--HHHHHHHH
T ss_pred             CCeEEEEEecCCCCcCcccCCCCc------------cEEEeccCCeEEecCCCCEEEccChHHHHHHHHH--HHHHHHHH
Confidence            999999999999999999999976            899999999974          799999999999  77999999


Q ss_pred             CCcccHHHHHHHHhhcceecCC
Q psy15698        428 IPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       428 ~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                      +|.+++.+|+++|..||.....
T Consensus       237 ~p~lt~~~v~~~L~~tA~~~~~  258 (284)
T 1sh7_A          237 NNGLTPLQLTGLLNSRASENKV  258 (284)
T ss_dssp             CTTCCHHHHHHHHHHHSEESCC
T ss_pred             CCCCCHHHHHHHHHhhCccCCc
Confidence            9999999999999999987653


No 16 
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00  E-value=3.8e-46  Score=392.42  Aligned_cols=232  Identities=19%  Similarity=0.142  Sum_probs=205.6

Q ss_pred             ccCchHHHhcCCCCC--CcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC------CCCCCCCchhhhHhhhccCCCcccc
Q psy15698        201 ILQANTLWDLGIRGS--GVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN------TLEDKLGHGTFVAGLIASSQRCLGF  271 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~--gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~------~~~D~~gHGT~VAGiIag~~~~~Gv  271 (577)
                      .|+++++|+. ++|+  ||+||||||||+ +||+|.+ +..+++|..+.      ...|..||||||||||++..++.||
T Consensus        29 ~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~g~~Gv  106 (347)
T 2iy9_A           29 AIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDSEFAKFSFTQDGSPFPVKKSEALYIHGTAMASLIASRYGIYGV  106 (347)
T ss_dssp             HHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTCEEEEEECBTTCCSSCCSSSHHHHHHHHHHHHHHHCSSSSCCS
T ss_pred             hCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcCcccCCcccCCCCCCCCCCCCCCCCcHHHHHHHHhcccCCccc
Confidence            5899999999 8999  999999999999 9999995 45566676543      3456679999999999998788999


Q ss_pred             CCCCcEeEEEEecCCCCCchHHHHHHHHHHHHC------CCcEEEeCCCCCCC--CCHHHHHHHHHHHcCCcEEEEecCC
Q psy15698        272 APDAELHIFRVFTNQQVSYTSWFLDAFNYAILK------KMDVLNLSIGGPDF--MDFPFVDKVWELTANRVILISAIGN  343 (577)
Q Consensus       272 AP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~------g~~ViN~S~G~~~~--~~~~~~~ai~~a~~~gilvV~AAGN  343 (577)
                      ||+|+|+.+|+++..+..   .+++||+||+++      +++|||||||...+  ....+.+++.++.++|+++|+||||
T Consensus       107 Ap~a~l~~~~v~~~~~~~---~~~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN  183 (347)
T 2iy9_A          107 YPHALISSRRVIPDGVQD---SWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGN  183 (347)
T ss_dssp             STTCEEEEEECCSSBCTT---HHHHHHHHHHTCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCB
T ss_pred             CCCCEEEEEEEecCCCHH---HHHHHHHHHHhhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCC
Confidence            999999999999875433   899999999999      99999999997642  3567889999999999999999999


Q ss_pred             CCCCC-----CCCCCCCCCC----------CeEEEeeecC--CCCcc-------CCCCCCCCCCcCCCCCCCccccEEec
Q psy15698        344 DGPLY-----GTLNNPADQM----------DVIGVGGINF--EDQIA-------KFSSRGMTAWELPGGYGRVKPDIVTY  399 (577)
Q Consensus       344 ~g~~~-----~~~~~Pa~~~----------~vI~VGA~~~--~~~~a-------~fS~~G~~~~~~p~~~g~~kpDi~Ap  399 (577)
                      +|.+.     ....+|+..+          ++|+|||++.  ++.++       .||++|+.           ||||+||
T Consensus       184 ~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g~~~~~~~~~~~fS~~G~~-----------~~di~AP  252 (347)
T 2iy9_A          184 DGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGETPVLHGGGITGSRFGNN-----------WVDIAAP  252 (347)
T ss_dssp             SCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTTSCCCBCCCSSSCBCBCTT-----------TCSEEEE
T ss_pred             CCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCCceecccCCCCCCCCCCCC-----------CCEEEeC
Confidence            99854     3678999999          9999999999  99999       99999963           4999999


Q ss_pred             CCceec----------CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCCC
Q psy15698        400 GSAVRG----------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILERP  450 (577)
Q Consensus       400 G~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~  450 (577)
                      |++|.+          +|||||||+|+|  ++||+++.+|.+++.+|+++|..||...+..
T Consensus       253 G~~i~s~~~~~~~~~~sGTS~AaP~VaG--~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~  311 (347)
T 2iy9_A          253 GQNITFLRPDAKTGTGSGTSEATAIVSG--VLAAMTSCNPRATATELKRTLLESADKYPSL  311 (347)
T ss_dssp             CSSEEEECTTSCEEEECSHHHHHHHHHH--HHHHHHHHCTTSCHHHHHHHHHHHSEECGGG
T ss_pred             CCCeEeecCCCCeEeccchHHHHHHHHH--HHHHHHHhCCCCCHHHHHHHHHHhCccCCCC
Confidence            999974          799999999999  7799999999999999999999999998743


No 17 
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00  E-value=6.7e-46  Score=378.66  Aligned_cols=232  Identities=24%  Similarity=0.265  Sum_probs=208.9

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeE
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHI  279 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~  279 (577)
                      .+++..+|+.+++|+||+||||||||+.+||+|.+ +..++++.. ....|..||||||||+|+|..  .||||+|+|+.
T Consensus        17 ~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~-~~~~d~~gHGT~vAgiiag~~--~GvAp~a~l~~   93 (276)
T 4dzt_A           17 DLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGRARVGYDALG-GNGQDCNGHGTHVAGTIGGVT--YGVAKAVNLYA   93 (276)
T ss_dssp             SSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTS-SCSCCSSSHHHHHHHHHHCTT--TCSSTTCEEEE
T ss_pred             cCCcccceecCCCCCCcEEEEEccCCCCCChhHccCeeccccCCC-CCCCCCCCCHHHHHHHHHccc--cCCCCCCEEEE
Confidence            36788899999999999999999999999999984 444566665 456678899999999999864  89999999999


Q ss_pred             EEEecCCCCCchHHHHHHHHHHHHC--CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCC
Q psy15698        280 FRVFTNQQVSYTSWFLDAFNYAILK--KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQ  357 (577)
Q Consensus       280 ~kv~~~~g~~~~~~~~~ai~~a~~~--g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~  357 (577)
                      +|+++..+....+.++++++|++++  +++|||||||...  ...+.+++.++.++|+++|+||||+|.+. ...+|+..
T Consensus        94 ~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~--~~~~~~a~~~a~~~gvlvv~AAGN~g~~~-~~~~Pa~~  170 (276)
T 4dzt_A           94 VRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV--STALDNAVKNSIAAGVVYAVAAGNDNANA-CNYSPARV  170 (276)
T ss_dssp             EECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--CHHHHHHHHHHHHTTCEEEEECCSSSSBG-GGEETTTC
T ss_pred             EEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC--CHHHHHHHHHHHhCCCEEEEECCCCCCCC-CCcCcccC
Confidence            9999998888999999999999987  8999999999865  68899999999999999999999999753 33479999


Q ss_pred             CCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcccccCCccccccccc
Q psy15698        358 MDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYH  425 (577)
Q Consensus       358 ~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~  425 (577)
                      +++|+|||++.++.++.||++|+.            +||+|||++|.+            +|||||||+|+|  ++||++
T Consensus       171 ~~vi~Vga~~~~~~~~~~S~~g~~------------~dv~ApG~~i~s~~~~~~~~~~~~sGTS~AaP~vaG--~aAll~  236 (276)
T 4dzt_A          171 AEALTVGATTSSDARASFSNYGSC------------VDLFAPGASIPSAWYTSDTATQTLNGTSMATPHVAG--VAALYL  236 (276)
T ss_dssp             TTSEEEEEECTTSBBCTTCCBSTT------------CCEEEECSSEEEECTTSSSCEEEECSHHHHHHHHHH--HHHHHH
T ss_pred             CCEEEEEEECCCCCcCCcCCCCCC------------ceEEeCCCCeEccccCCCCceEEeeEHHHHHHHHHH--HHHHHH
Confidence            999999999999999999999976            899999999964            699999999999  779999


Q ss_pred             cCCCcccHHHHHHHHhhcceecCCCcc
Q psy15698        426 GAIPIIVNVTILNGMGVVGKILERPKW  452 (577)
Q Consensus       426 ~~~P~l~~~~i~~~l~~ta~~~~~~~~  452 (577)
                      +.+|.+++.+|+++|..||.....++.
T Consensus       237 ~~~p~lt~~~v~~~L~~tA~~~~~~~~  263 (276)
T 4dzt_A          237 EQNPSATPASVASAILNGATTGRLSGI  263 (276)
T ss_dssp             HHCTTCCHHHHHHHHHHHSEESCCBSC
T ss_pred             HHCCCCCHHHHHHHHHhhCcCCccCCC
Confidence            999999999999999999998875554


No 18 
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00  E-value=1.7e-45  Score=376.20  Aligned_cols=228  Identities=26%  Similarity=0.319  Sum_probs=204.9

Q ss_pred             cCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCC-CCCCCCCchhhhHhhhccCCCccccCCCCcEeE
Q psy15698        202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNEN-TLEDKLGHGTFVAGLIASSQRCLGFAPDAELHI  279 (577)
Q Consensus       202 i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~-~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~  279 (577)
                      ++++.+|..+++|+||+||||||||+.+||+|.+ +..+++|.++. .+.|..+|||||||+|+|..  .||||+|+|+.
T Consensus        18 ~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~~~~d~~~~~~~~~d~~gHGT~vAgiia~~~--~GvAp~a~i~~   95 (278)
T 2b6n_A           18 LPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGRASSGYDFIDNDYDATDCNGHGTHVAGTIGGST--YGVAKNVNVVG   95 (278)
T ss_dssp             SSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTCEEEEEETTTTBSCCCCSSSHHHHHHHHHHCTT--TCSSTTCEEEE
T ss_pred             CCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcccccCeecCCCCCCCCCCCCcHHHHHHHHHCCC--cCCCCCCeEEE
Confidence            4567789999999999999999999999999985 34467777543 45788899999999999863  89999999999


Q ss_pred             EEEecCCCCCchHHHHHHHHHHHH--CCCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCC
Q psy15698        280 FRVFTNQQVSYTSWFLDAFNYAIL--KKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQ  357 (577)
Q Consensus       280 ~kv~~~~g~~~~~~~~~ai~~a~~--~g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~  357 (577)
                      +|+++..+.+..+.++++|+|+++  .+++|||||||...  ...+.++++++.++|+++|+||||+|.+. ...+|+..
T Consensus        96 ~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~--~~~~~~ai~~a~~~gi~vV~AAGN~g~~~-~~~~Pa~~  172 (278)
T 2b6n_A           96 VRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA--SQATDDAVNAAVAAGITFVVAAGNDNSNA-CNYSPARA  172 (278)
T ss_dssp             EECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC--CHHHHHHHHHHHHTTCEEEEECCSSSSBG-GGEETTTC
T ss_pred             EEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc--CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-CCcCcccC
Confidence            999998888889999999999997  58999999999875  68899999999999999999999999753 34579999


Q ss_pred             CCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCcccccCCccccccccc
Q psy15698        358 MDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQYMWPYCTQPLYH  425 (577)
Q Consensus       358 ~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~VaG~a~~aL~~  425 (577)
                      +++|+|||++.++.++.||++|+.            |||+|||++|.+            +|||||||+|+|  ++||++
T Consensus       173 ~~vi~Vga~~~~~~~~~~S~~G~~------------~di~ApG~~i~s~~~~~~~~~~~~sGTS~AaP~vaG--~aAll~  238 (278)
T 2b6n_A          173 ADAITVGSTTSNDSRSSFSNYGTC------------LDIYAPGSSITSSWYTSNSATNTISGTSMASPHVAG--VAALYL  238 (278)
T ss_dssp             TTSEEEEEECTTSBBCTTCCBSTT------------CCEEEECSSEEEECTTSTTCEEEECSHHHHHHHHHH--HHHHHH
T ss_pred             CCeEEEEeeCCCCCcCCcCCCCCC------------CeEEeCCCCeECcccCCCCCEEEeCcHHHHHHHHHH--HHHHHH
Confidence            999999999999999999999975            999999999864            699999999999  779999


Q ss_pred             cCCCcccHHHHHHHHhhcceecC
Q psy15698        426 GAIPIIVNVTILNGMGVVGKILE  448 (577)
Q Consensus       426 ~~~P~l~~~~i~~~l~~ta~~~~  448 (577)
                      +.+|.+++.+|+++|..||....
T Consensus       239 ~~~p~lt~~~v~~~L~~tA~~~~  261 (278)
T 2b6n_A          239 DENPNLSPAQVTNLLKTRATADK  261 (278)
T ss_dssp             HHCTTCCHHHHHHHHHHHSEESC
T ss_pred             HhCCCCCHHHHHHHHHHhCccCC
Confidence            99999999999999999998754


No 19 
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00  E-value=1e-44  Score=392.64  Aligned_cols=256  Identities=24%  Similarity=0.250  Sum_probs=219.2

Q ss_pred             hccCchHHHh-cCCCCCCcEEEEEcCCCCC------CCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhcc-CCCccc
Q psy15698        200 SILQANTLWD-LGIRGSGVKVAVFDTGLSS------GHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIAS-SQRCLG  270 (577)
Q Consensus       200 ~~i~~~~~w~-~g~~G~gV~VaViDtGid~------~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag-~~~~~G  270 (577)
                      +.++++.+|+ .+++|+||+||||||||+.      .||+|.+ +...++|.......|..||||||||+|+| +.++.|
T Consensus         6 ~~i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~i~~~~~~~~~~~~~d~~gHGT~VAgiiag~g~~~~G   85 (434)
T 1wmd_A            6 GIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDTNGHGTHVAGSVLGNGSTNKG   85 (434)
T ss_dssp             HHTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEEEEEETTTTTCCCCSSSHHHHHHHHHHCCSSSSCC
T ss_pred             hhhCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCCEeeeccccCCCCCCCCCCcHHHHHHHHHcCCCCcee
Confidence            5689999998 8999999999999999999      7999984 44567777666778889999999999998 455789


Q ss_pred             cCCCCcEeEEEEecCCCCC--chHHHHHHHHHHHHCCCcEEEeCCCCCCC-CCHHHHHHHHHH-HcCCcEEEEecCCCCC
Q psy15698        271 FAPDAELHIFRVFTNQQVS--YTSWFLDAFNYAILKKMDVLNLSIGGPDF-MDFPFVDKVWEL-TANRVILISAIGNDGP  346 (577)
Q Consensus       271 vAP~A~l~~~kv~~~~g~~--~~~~~~~ai~~a~~~g~~ViN~S~G~~~~-~~~~~~~ai~~a-~~~gilvV~AAGN~g~  346 (577)
                      |||+|+|+.+|+++..+..  ..+.+.++|++++++|++|||||||.... ....+..++.++ .++|++||+||||+|.
T Consensus        86 vAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~id~~~~~~gvlvV~AAGN~g~  165 (434)
T 1wmd_A           86 MAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGP  165 (434)
T ss_dssp             SSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBCCTTCCCHHHHHHHHHHHHSSCEEEEECCSCTT
T ss_pred             eCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEecCCCCcCCcCCHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence            9999999999999876543  45678999999999999999999998742 224556666665 5799999999999998


Q ss_pred             CCCCCCCCCCCCCeEEEeeecC-----------CCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------
Q psy15698        347 LYGTLNNPADQMDVIGVGGINF-----------EDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------  405 (577)
Q Consensus       347 ~~~~~~~Pa~~~~vI~VGA~~~-----------~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------  405 (577)
                      +..++.+|+..+++|+|||++.           .+.++.||++||+      .+|++||||+|||++|.+          
T Consensus       166 ~~~~~~~Pa~~~~vitVga~~~~~~~~~~~~~~~~~~a~fS~~G~~------~~g~~kpdi~ApG~~i~s~~~~~~~~~~  239 (434)
T 1wmd_A          166 NGGTISAPGTAKNAITVGATENLRPSFGSYADNINHVAQFSSRGPT------KDGRIKPDVMAPGTFILSARSSLAPDSS  239 (434)
T ss_dssp             SSSCCCBSTTCSSSEEEEEECCSCGGGCGGGSCTTSBCTTSCCCCC------TTSCCCCCEEEECSSEEEECCTTCCGGG
T ss_pred             CCcccCCcccCCccEEEecccccCcccCcccCCCCccccccCCCCC------CCCCCCceEEcCCCCeEecCCCCCCCcc
Confidence            7677899999999999999997           7899999999965      479999999999999853          


Q ss_pred             ------------CcCCcccccCCccccccccccCCCcc-----cHHHHHHHHhhcceecCCCccccCCCCCCccc
Q psy15698        406 ------------PSTNGECQYMWPYCTQPLYHGAIPII-----VNVTILNGMGVVGKILERPKWYPYLPHNGEFL  463 (577)
Q Consensus       406 ------------sGTS~A~P~VaG~a~~aL~~~~~P~l-----~~~~i~~~l~~ta~~~~~~~~~p~~~~~g~~l  463 (577)
                                  +|||||||+|+|  ++||+++.+|.+     ++.+|+.+|..+|..++...++..+|++--.+
T Consensus       240 ~~~~~~~~~~~~sGTS~AaP~vaG--~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~~~~~~~G~G~vd~  312 (434)
T 1wmd_A          240 FWANHDSKYAYMGGTSMATPIVAG--NVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGYPNGNQGWGRVTL  312 (434)
T ss_dssp             SSEEEETTEEEECSHHHHHHHHHH--HHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCSSCTTTTTCBCCH
T ss_pred             cccCCCCceEeecchhHHHHHHHH--HHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCCCCCccCCcCeEeH
Confidence                        599999999999  779999998876     89999999999999877666777777754333


No 20 
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00  E-value=7.4e-45  Score=394.50  Aligned_cols=242  Identities=21%  Similarity=0.256  Sum_probs=207.0

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCC---CCCCCCCCchhhhHhhhcc---CCCccccC
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNE---NTLEDKLGHGTFVAGLIAS---SQRCLGFA  272 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~---~~~~D~~gHGT~VAGiIag---~~~~~GvA  272 (577)
                      +.|+++++|+.+  |+||+||||||||+.+||+|.+ +..++++...   ..+.|..||||||||||++   +.++.|||
T Consensus         9 ~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~g~~GvA   86 (441)
T 1y9z_A            9 TFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPGNNNAHGTHVAGTIAAIANNEGVVGVM   86 (441)
T ss_dssp             HHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTSEEEECCCTTSCCTTCCCSSCCHHHHHHHHHHCCCSSSBCCCSS
T ss_pred             hhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcCcccCcccCCCCCCCCCCCCCCcHHHHHHHHhcccCCCCceEec
Confidence            458899999874  7799999999999999999984 3444454432   2356778999999999998   45789999


Q ss_pred             CCC--cEeEEEEecCCCCCchHHHHHHHHHHHHC-CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCC
Q psy15698        273 PDA--ELHIFRVFTNQQVSYTSWFLDAFNYAILK-KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYG  349 (577)
Q Consensus       273 P~A--~l~~~kv~~~~g~~~~~~~~~ai~~a~~~-g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~  349 (577)
                      |+|  +|+.+|+++..+.++.+.+++||+||+++ |++|||||||.+.. ...+.+++.+|.++|+++|+||||+|..  
T Consensus        87 P~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~~~~-~~~~~~ai~~a~~~gv~vV~AAGN~g~~--  163 (441)
T 1y9z_A           87 PNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGS-TTTERNALNTHYNNGVLLIAAAGNAGDS--  163 (441)
T ss_dssp             CSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCBSCC-BHHHHHHHHHHHHTTCEEEEECCSSSSS--
T ss_pred             CCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCCCCCC-CHHHHHHHHHHHHCCCEEEEecCCCCCC--
Confidence            995  89999999988777888999999999999 99999999998753 4678899999999999999999999974  


Q ss_pred             CCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCcee-------------------------
Q psy15698        350 TLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR-------------------------  404 (577)
Q Consensus       350 ~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~-------------------------  404 (577)
                      ...+|+..+++|+|||++.++.++.||++|+.            +||+|||++|.                         
T Consensus       164 ~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~------------vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~  231 (441)
T 1y9z_A          164 SYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQ------------VEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGV  231 (441)
T ss_dssp             BCCBTTTSTTEEEEEEECTTCCBCTTSCCCTT------------EEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCC
T ss_pred             CCCCCCCCCCeEEEEEECCCCCCCccccCCCc------------eEEEeccCCeeccccCCCcccceeeccccccccccc
Confidence            45689999999999999999999999999975            66666664431                         


Q ss_pred             --------------------------------------------------------------------------------
Q psy15698        405 --------------------------------------------------------------------------------  404 (577)
Q Consensus       405 --------------------------------------------------------------------------------  404 (577)
                                                                                                      
T Consensus       232 ~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~  311 (441)
T 1y9z_A          232 VPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSN  311 (441)
T ss_dssp             EECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECC
T ss_pred             CcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeC
Confidence                                                                                            


Q ss_pred             -----------------------------------------------------cCcCCcccccCCccccccccccCCCcc
Q psy15698        405 -----------------------------------------------------GPSTNGECQYMWPYCTQPLYHGAIPII  431 (577)
Q Consensus       405 -----------------------------------------------------ssGTS~A~P~VaG~a~~aL~~~~~P~l  431 (577)
                                                                           .+|||||||||+|  ++||+++++|.|
T Consensus       312 ~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~t~~~~~~~~y~~~sGTSmAaP~VAG--~aALl~~~~p~~  389 (441)
T 1y9z_A          312 SALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSG--VATLVWSYHPEC  389 (441)
T ss_dssp             TTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSEEEEEEEEEESEEEECSHHHHHHHHHH--HHHHHHHHCTTS
T ss_pred             CCccccccccccccccCccccEEEEeHHHHHHHHHHhcCCcccccccCCCceeecccccCCcccch--HHHHHHHHCCCC
Confidence                                                                 3699999999999  779999999999


Q ss_pred             cHHHHHHHHhhcceecCCCccccCCCCCC
Q psy15698        432 VNVTILNGMGVVGKILERPKWYPYLPHNG  460 (577)
Q Consensus       432 ~~~~i~~~l~~ta~~~~~~~~~p~~~~~g  460 (577)
                      ++.+|+++|..||..++.++.+..+|++-
T Consensus       390 sp~~ik~~L~~TA~~~~~~g~~~~~G~G~  418 (441)
T 1y9z_A          390 SASQVRAALNATADDLSVAGRDNQTGYGM  418 (441)
T ss_dssp             CHHHHHHHHHHHSBCCSSSSCBTTTBTCB
T ss_pred             CHHHHHHHHHhhchhhccCCCcccccccc
Confidence            99999999999999998777665555543


No 21 
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00  E-value=1.6e-44  Score=381.55  Aligned_cols=237  Identities=14%  Similarity=0.150  Sum_probs=169.5

Q ss_pred             cCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCC--C-ccCCC----------------------------------
Q psy15698        202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAE--R-TDWTN----------------------------------  244 (577)
Q Consensus       202 i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~--~-~~~~~----------------------------------  244 (577)
                      .+++++|+++.+|++|+|||||||||++||+|++...  . ..|.+                                  
T Consensus        18 pG~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (357)
T 4h6x_A           18 PGLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVI   97 (357)
T ss_dssp             TTHHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHC
T ss_pred             cCHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccccc
Confidence            4789999999999999999999999999999984210  0 00110                                  


Q ss_pred             --CCCCCCCCCchhhhHhhhcc--CCCccccCCCCcEeEEEEecCC-----CCCchHHHHHHHHHHHHCCCcEEEeCCCC
Q psy15698        245 --ENTLEDKLGHGTFVAGLIAS--SQRCLGFAPDAELHIFRVFTNQ-----QVSYTSWFLDAFNYAILKKMDVLNLSIGG  315 (577)
Q Consensus       245 --~~~~~D~~gHGT~VAGiIag--~~~~~GvAP~A~l~~~kv~~~~-----g~~~~~~~~~ai~~a~~~g~~ViN~S~G~  315 (577)
                        ...+.|.+||||||||||+|  +.++.||||+|+|+.+|++...     +......++++|+|++++|++|||||||.
T Consensus        98 ~~~~~~~D~~gHGThVAGiiag~~~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~  177 (357)
T 4h6x_A           98 PDTKDRIVLNDHACHVTSTIVGQEHSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFCR  177 (357)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHCCTTSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC---
T ss_pred             CCCCCCcCCCCcHHHHHHHHhccCCCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEEeecccc
Confidence              01123456899999999998  4578999999999999987532     22345578899999999999999999997


Q ss_pred             CCC---CCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCc
Q psy15698        316 PDF---MDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRV  392 (577)
Q Consensus       316 ~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~  392 (577)
                      +..   ....+.+++.++.++|+++|+||||+|.  ....+|+..+++|+|||++.++.++.|||+|+.         ..
T Consensus       178 ~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~--~~~~~Pa~~~~vi~Vga~~~~~~~~~fSn~G~~---------~~  246 (357)
T 4h6x_A          178 PTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSN--ESWCLPAVLPGTLAVGAAKVDGTPCHFSNWGGN---------NT  246 (357)
T ss_dssp             --------CHHHHHHHHHHHTTCEEEEECC-----------------CEEEEEECTTSSBCTTCC---C---------TT
T ss_pred             CCccccchhHHHHHHHHHhhCCeEEEecccCCCC--CcCcCcccCCCCceEEEeccCCcccccccCCCC---------CC
Confidence            642   2456888999999999999999999987  456799999999999999999999999999943         45


Q ss_pred             cccEEecCCceec-----------CcCCcccccCCcccccccccc----CCCcccHHHHHHHHhhcceecCCCc
Q psy15698        393 KPDIVTYGSAVRG-----------PSTNGECQYMWPYCTQPLYHG----AIPIIVNVTILNGMGVVGKILERPK  451 (577)
Q Consensus       393 kpDi~ApG~~I~s-----------sGTS~A~P~VaG~a~~aL~~~----~~P~l~~~~i~~~l~~ta~~~~~~~  451 (577)
                      ||||+|||++|++           +|||||||+|+|  ++||+++    .+|.|++.+|+++|..||+.++...
T Consensus       247 ~~di~APG~~i~s~~~~~~~~~~~sGTS~AaP~vaG--~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~  318 (357)
T 4h6x_A          247 KEGILAPGEEILGAQPCTEEPVRLTGTSMAAPVMTG--ISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV  318 (357)
T ss_dssp             TTEEEEECSSEEECCTTCSCCEEECSHHHHHHHHHH--HHHHHHHHHHHTTCCCCHHHHHHHHHHC--------
T ss_pred             ccceeecCCCeEeccCCCCcccccCcHHHHHHHHHH--HHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC
Confidence            7999999999974           799999999999  7788885    5678999999999999999887533


No 22 
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00  E-value=6.2e-45  Score=372.27  Aligned_cols=219  Identities=21%  Similarity=0.246  Sum_probs=197.2

Q ss_pred             HHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEEecC
Q psy15698        207 LWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTN  285 (577)
Q Consensus       207 ~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv~~~  285 (577)
                      +|+. .+|+||+||||||||+.+||+|.+ +..+++|.  ....|..+|||||||+|++.  ..||||+|+|+.+|+++.
T Consensus        24 ~~~~-~~G~gv~VaViDsGvd~~H~~l~~~~~~~~~~~--~~~~d~~gHGT~vAgiia~~--~~GvAp~a~i~~~~v~~~   98 (279)
T 2pwa_A           24 YYDE-SAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYY--YSSRDGNGHGTHCAGTVGSR--TYGVAKKTQLFGVKVLDD   98 (279)
T ss_dssp             ECCT-TTTTTEEEEEEESCCCTTCGGGTTCEEEEEESS--SCSSCSSSHHHHHHHHHHCT--TTCSSTTCEEEEEECSCT
T ss_pred             cccC-CCCCCCEEEEEeCCCCCCChhHhCccccccCCC--CCCCCCCCCHHHHHHHHHhc--ccccCCCCEEEEEEeEcC
Confidence            5554 799999999999999999999995 34456776  34677889999999999986  489999999999999998


Q ss_pred             CCCCchHHHHHHHHHHHHCCC-------cEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCC
Q psy15698        286 QQVSYTSWFLDAFNYAILKKM-------DVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQM  358 (577)
Q Consensus       286 ~g~~~~~~~~~ai~~a~~~g~-------~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~  358 (577)
                      .+.++.+.++++|+|++++++       +|||||||...  ...+.+++.++.++|+++|+||||+|.+. ...+|+..+
T Consensus        99 ~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~ai~~a~~~gi~vV~AAGN~g~~~-~~~~Pa~~~  175 (279)
T 2pwa_A           99 NGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGGY--SSSVNSAAARLQSSGVMVAVAAGNNNADA-RNYSPASEP  175 (279)
T ss_dssp             TSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC--CHHHHHHHHHHHHTTEEEEEECCSSSSBG-GGEETTTCT
T ss_pred             CCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCCC--CHHHHHHHHHHHHCCCEEEEECCCCCCcC-CCcCcccCC
Confidence            888889999999999999877       99999999864  68899999999999999999999999753 345899999


Q ss_pred             CeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccCC
Q psy15698        359 DVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGAI  428 (577)
Q Consensus       359 ~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~~  428 (577)
                      ++|+|||++.++.++.||++|+.            |||+|||++|.+          +|||||||+|+|  ++||+++. 
T Consensus       176 ~vi~Vga~~~~~~~~~~S~~G~~------------~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG--~aAll~~~-  240 (279)
T 2pwa_A          176 SVCTVGASDRYDRRSSFSNYGSV------------LDIFGPGTDILSTWIGGSTRSISGTSMATPHVAG--LAAYLMTL-  240 (279)
T ss_dssp             TSEEEEEECTTSBBCTTCCBSTT------------CCEEEECSSEEEEETTTEEEEECSHHHHHHHHHH--HHHHHHHT-
T ss_pred             cEEEEEEecCCCCcCCcCCCCCc------------ceEEEecCCeEEeecCCCEEEcCChHHHHHHHHH--HHHHHHhC-
Confidence            99999999999999999999976            999999999964          799999999999  77999999 


Q ss_pred             CcccHHHHHHHHhhcceecC
Q psy15698        429 PIIVNVTILNGMGVVGKILE  448 (577)
Q Consensus       429 P~l~~~~i~~~l~~ta~~~~  448 (577)
                      |.+++.+|+++|..||....
T Consensus       241 p~lt~~~v~~~L~~tA~~~~  260 (279)
T 2pwa_A          241 GKTTAASACRYIADTANKGD  260 (279)
T ss_dssp             TSCCTTTHHHHHHHHSEESC
T ss_pred             CCCCHHHHHHHHHHhCcccc
Confidence            99999999999999998865


No 23 
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00  E-value=1.1e-44  Score=374.39  Aligned_cols=242  Identities=22%  Similarity=0.212  Sum_probs=203.1

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC--CCCccCCCC--CCCCCCCCchhhhHhhhcc--CCCccccCC
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV--AERTDWTNE--NTLEDKLGHGTFVAGLIAS--SQRCLGFAP  273 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~--~~~~~~~~~--~~~~D~~gHGT~VAGiIag--~~~~~GvAP  273 (577)
                      +..+++++|+.+.+++||+||||||||+.+||+|.+.  ....++...  +...|.++|||||||||+|  +.++.||||
T Consensus         6 ~i~G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~GVAp   85 (306)
T 4h6w_A            6 NIPGLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGADLTRLPSLVSGEANANGSMSTHGTHVASIIFGQHDSPVTGIAP   85 (306)
T ss_dssp             -CTTHHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCEEEECC----------CCCCHHHHHHHHHHHCCTTSSSCCSST
T ss_pred             CCcCHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCcccCCCcccCCCCCCCCCCCCchHHHHHHHHccccCCcceecc
Confidence            3458999999987779999999999999999999843  222333322  2345678999999999998  457899999


Q ss_pred             CCcEeEEEEecCC-CCCchHHHHHHHHHHHHCCCcEEEeCCCCC---CCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCC
Q psy15698        274 DAELHIFRVFTNQ-QVSYTSWFLDAFNYAILKKMDVLNLSIGGP---DFMDFPFVDKVWELTANRVILISAIGNDGPLYG  349 (577)
Q Consensus       274 ~A~l~~~kv~~~~-g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~---~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~  349 (577)
                      +|+|+.+|++.+. +......++++|+||++++++|||+|||..   ...+..+.+++.++.++|+++|+|+||+|.  .
T Consensus        86 ~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~--~  163 (306)
T 4h6w_A           86 QCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGC--E  163 (306)
T ss_dssp             TSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSS--B
T ss_pred             ccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCc--c
Confidence            9999999998654 456677899999999999999999999953   234677889999999999999999999997  4


Q ss_pred             CCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccc
Q psy15698        350 TLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYC  419 (577)
Q Consensus       350 ~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a  419 (577)
                      +..+|+..+++|+|||++..+.++.||++|+.         ..+|||+|||++|.+          +|||||||+|+|  
T Consensus       164 ~~~~Pa~~~~vi~Vga~~~~~~~~~~s~~g~~---------~~~~di~APG~~i~s~~~~~~~~~~sGTS~AaP~VaG--  232 (306)
T 4h6w_A          164 CLHVPASLPTVLAVGAMDDQGKPVDFSNWGDA---------YQKQGILAPGKDILGAKPNGGTIRLSGTSFATPIVSG--  232 (306)
T ss_dssp             CEEETTTSTTCEEEEEECTTSCBCSSSCBCHH---------HHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHH--
T ss_pred             cccccccCCcceEEEEecCCCCccccccccCC---------cCcceeecCCcCcccccCCCceeccCCCcchhHHHHH--
Confidence            56799999999999999999999999999944         457999999999975          799999999999  


Q ss_pred             ccccccc----CCCcccHHHHHHHHhhcceecCCCcccc
Q psy15698        420 TQPLYHG----AIPIIVNVTILNGMGVVGKILERPKWYP  454 (577)
Q Consensus       420 ~~aL~~~----~~P~l~~~~i~~~l~~ta~~~~~~~~~p  454 (577)
                      ++||+++    .+|.+++.+|+++|..||+.++.++.++
T Consensus       233 ~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~~~  271 (306)
T 4h6w_A          233 VAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDTDD  271 (306)
T ss_dssp             HHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTCSC
T ss_pred             HHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCCCC
Confidence            6688764    5699999999999999999998776654


No 24 
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00  E-value=2.8e-43  Score=412.37  Aligned_cols=243  Identities=23%  Similarity=0.327  Sum_probs=204.9

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC--------------------------------CCCccCCCCCC
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV--------------------------------AERTDWTNENT  247 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~--------------------------------~~~~~~~~~~~  247 (577)
                      +.++++.+|+.+++|+||+||||||||+++||+|...                                +.+++|..+..
T Consensus         2 d~i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~~   81 (926)
T 1xf1_A            2 DPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDGK   81 (926)
T ss_dssp             CTTCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCCSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCSC
T ss_pred             CccccHHHHhccCCCCCcEEEEEecCCCCCCHhHcCCCCCcccccchhhhcccccccCcccccccCcccceeeccccCCC
Confidence            3689999999999999999999999999999999831                                11234444433


Q ss_pred             CCCCCCchhhhHhhhccCC--------CccccCCCCcEeEEEEecCCCC-CchHHHHHHHHHHHHCCCcEEEeCCCCCC-
Q psy15698        248 LEDKLGHGTFVAGLIASSQ--------RCLGFAPDAELHIFRVFTNQQV-SYTSWFLDAFNYAILKKMDVLNLSIGGPD-  317 (577)
Q Consensus       248 ~~D~~gHGT~VAGiIag~~--------~~~GvAP~A~l~~~kv~~~~g~-~~~~~~~~ai~~a~~~g~~ViN~S~G~~~-  317 (577)
                      ..|..||||||||||||..        ++.||||+|+|+++|+++..+. +..+.+++||+||+++|++|||||||+.. 
T Consensus        82 ~~D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~  161 (926)
T 1xf1_A           82 TAVDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMSFGNAAL  161 (926)
T ss_dssp             CCCSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEEEECCSSCCC
T ss_pred             CCCCCCcHHHHHHHHhCCCccCcccCCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEEEECCCCCCC
Confidence            4488899999999999833        6799999999999999987654 34568999999999999999999999753 


Q ss_pred             ---CCCHHHHHHHHHHHcCCcEEEEecCCCCC-------------CCCCCCCCCCCCCeEEEeeecCC------------
Q psy15698        318 ---FMDFPFVDKVWELTANRVILISAIGNDGP-------------LYGTLNNPADQMDVIGVGGINFE------------  369 (577)
Q Consensus       318 ---~~~~~~~~ai~~a~~~gilvV~AAGN~g~-------------~~~~~~~Pa~~~~vI~VGA~~~~------------  369 (577)
                         .....+..++..|.++|+++|+||||+|.             ...++.+|+..+++|+|||++.+            
T Consensus       162 ~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~~~~~~~  241 (926)
T 1xf1_A          162 AYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVKTA  241 (926)
T ss_dssp             TTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEEEEEECT
T ss_pred             CccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccceEEEcC
Confidence               23567889999999999999999999985             34567899999999999997521            


Q ss_pred             --------------------------------------------------------------------------------
Q psy15698        370 --------------------------------------------------------------------------------  369 (577)
Q Consensus       370 --------------------------------------------------------------------------------  369 (577)
                                                                                                      
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~lv~~~~g~~~~~~~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~  321 (926)
T 1xf1_A          242 DQQDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIE  321 (926)
T ss_dssp             TSCEEEEEEEEESCCCTTCCEEEEECTTSCSTTTTTTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEE
T ss_pred             CCcceeeEEEecCCCCCCceEEEEECCCCCCccchhhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccc
Confidence                                                                                            


Q ss_pred             ------------------------------------------CCccCCCCCCCCCCcCCCCCCCccccEEecCCceec--
Q psy15698        370 ------------------------------------------DQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG--  405 (577)
Q Consensus       370 ------------------------------------------~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s--  405 (577)
                                                                +.++.||||||+      .++++||||+|||++|++  
T Consensus       322 ~~~~~~iP~~~i~~~~g~~l~~~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~------~~~~lKPDI~APG~~I~sa~  395 (926)
T 1xf1_A          322 LPNVDQMPAAFISRKDGLLLKDNPQKTITFNATPKVLPTASGTKLSRFSSWGLT------ADGNIKPDIAAPGQDILSSV  395 (926)
T ss_dssp             CCCSTTCCEEEECHHHHHHHHHCSSCEEEECSSCEEEECSSCSBCCTTSCCCBC------TTSCBSCCEEEECCCEEESS
T ss_pred             cCccccccEEEEeHHHHHHHHhCCceEEEecccceecccCCcceeccccCCCCC------CCCccCceEECCCCCEEeec
Confidence                                                      246789999965      478999999999999975  


Q ss_pred             --------CcCCcccccCCcccccccc----ccCCCcccHHH----HHHHHhhcceecCCC
Q psy15698        406 --------PSTNGECQYMWPYCTQPLY----HGAIPIIVNVT----ILNGMGVVGKILERP  450 (577)
Q Consensus       406 --------sGTS~A~P~VaG~a~~aL~----~~~~P~l~~~~----i~~~l~~ta~~~~~~  450 (577)
                              +|||||||||||  ++||+    ++.+|.|++++    |+++|..||..+..+
T Consensus       396 ~~~~y~~~SGTSMAaPhVAG--~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~  454 (926)
T 1xf1_A          396 ANNKYAKLSGTSMSAPLVAG--IMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDE  454 (926)
T ss_dssp             SCSSSCEEESCTTHHHHHHH--HHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEG
T ss_pred             cCCcceecCccchhHHHHHH--HHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccC
Confidence                    799999999999  67888    46799999997    999999999987644


No 25 
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00  E-value=1.6e-43  Score=399.00  Aligned_cols=237  Identities=23%  Similarity=0.295  Sum_probs=199.8

Q ss_pred             chHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC----------------------------CCCccCC------------
Q psy15698        204 ANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV----------------------------AERTDWT------------  243 (577)
Q Consensus       204 ~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~----------------------------~~~~~~~------------  243 (577)
                      ...+|+.+++|+||+||||||||+.+||+|.+.                            +..++|.            
T Consensus        13 ~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~~~~~~~~~~~~~   92 (649)
T 3i6s_A           13 SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNI   92 (649)
T ss_dssp             SSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECCHHHHHHCTTCCC
T ss_pred             chhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEeccCccccccccccc
Confidence            356999999999999999999999999999741                            1122232            


Q ss_pred             CCCCCCCCCCchhhhHhhhccCC------------CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEe
Q psy15698        244 NENTLEDKLGHGTFVAGLIASSQ------------RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNL  311 (577)
Q Consensus       244 ~~~~~~D~~gHGT~VAGiIag~~------------~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~  311 (577)
                      +..++.|.+||||||||||+|..            .+.|+||+|+|+++|+++..+ +..+++++||+||+++|++||||
T Consensus        93 ~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~Ai~~A~~~gvdVIn~  171 (649)
T 3i6s_A           93 TMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG-TFTSDLIAAMDQAVADGVDMISI  171 (649)
T ss_dssp             TTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-ECHHHHHHHHHHHHHTTCSEEEE
T ss_pred             CCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-CCHHHHHHHHHHHHHcCCCEEEe
Confidence            11346788999999999999832            157999999999999999876 78899999999999999999999


Q ss_pred             CCCCCC--CCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecC---------------------
Q psy15698        312 SIGGPD--FMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINF---------------------  368 (577)
Q Consensus       312 S~G~~~--~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~---------------------  368 (577)
                      |||+..  +..+.+..++.+|.++|+++|+||||+|+...  ..|+..+++|+|||.+.                     
T Consensus       172 SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~--t~~~~ap~vitVgAst~dr~f~~~~~lgng~~~~g~sl  249 (649)
T 3i6s_A          172 SYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIG--SLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL  249 (649)
T ss_dssp             CCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTT--CCSCCCTTSEEEEEEECSCEEEEEEEETTSCEEEEECC
T ss_pred             CCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCC--ccCCCCCceEEEeeeecccceeeEEEeCCCcEEeeeec
Confidence            999753  23467888888999999999999999998644  46778899999998321                     


Q ss_pred             --------------------------------------------------------------------------------
Q psy15698        369 --------------------------------------------------------------------------------  368 (577)
Q Consensus       369 --------------------------------------------------------------------------------  368 (577)
                                                                                                      
T Consensus       250 ~~~~~~~~~~plv~~~~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~  329 (649)
T 3i6s_A          250 FPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPG  329 (649)
T ss_dssp             CSSCBCEEEEEEECCTTTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCE
T ss_pred             ccCcccCcceeeEecccccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccccccccCcCCE
Confidence                                                                                            


Q ss_pred             ------------------------------------CCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec-------
Q psy15698        369 ------------------------------------EDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG-------  405 (577)
Q Consensus       369 ------------------------------------~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s-------  405 (577)
                                                          .+.++.||||||.    +...+++||||+|||++|++       
T Consensus       330 ~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~----~~~~~ilKPDI~APG~~Ilsa~~~~~~  405 (649)
T 3i6s_A          330 VVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPS----RSYLGISKPDILAPGVLILAAYPPNVF  405 (649)
T ss_dssp             EEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSC----TTCTTSCSCCEEEECSSEEEECCTTSC
T ss_pred             EEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCC----CCCCCccCCeEEeCCCCeEeecCCCCC
Confidence                                                2345789999987    34568999999999999963       


Q ss_pred             -----------------CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCC
Q psy15698        406 -----------------PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       406 -----------------sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                                       +|||||||||+|  ++||+++.+|.|++++|+++|..||..++.
T Consensus       406 ~~~~~~d~~~~~~y~~~SGTSMAaPhVAG--vaALlks~~P~~Spa~IksaLmtTA~~~~~  464 (649)
T 3i6s_A          406 ATSIGTNILLSTDYILESGTSMAAPHAAG--IAAMLKAAHPEWSPSAIRSAMMTTADPLDN  464 (649)
T ss_dssp             CEEETTTEEECCSEEEECSHHHHHHHHHH--HHHHHHHHSTTCCHHHHHHHHHHTCBCBCT
T ss_pred             ccccccccccccceecccccccccHHHHH--HHHHHHHhCCCCCHHHHHHHHhcccccccC
Confidence                             599999999999  779999999999999999999999998764


No 26 
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00  E-value=6.8e-44  Score=364.39  Aligned_cols=222  Identities=21%  Similarity=0.284  Sum_probs=197.8

Q ss_pred             chHHHhcCCCCCCcEEEEEcCCCCCCCCCCCC-CCCCccCCCCCCCCCCCCchhhhHhhhccCCCccccCCCCcEeEEEE
Q psy15698        204 ANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN-VAERTDWTNENTLEDKLGHGTFVAGLIASSQRCLGFAPDAELHIFRV  282 (577)
Q Consensus       204 ~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~-~~~~~~~~~~~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~l~~~kv  282 (577)
                      ...+|+.. +|+||+||||||||+.+||+|.+ +....+|....  .|..||||||||+|++..  .||||+|+|+.+|+
T Consensus        22 ~~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~~~~~~~~~~~~--~d~~gHGT~vAgii~~~~--~GvAp~a~l~~~~v   96 (279)
T 3f7m_A           22 TAYAYDTS-AGAGACVYVIDTGVEDTHPDFEGRAKQIKSYASTA--RDGHGHGTHCAGTIGSKT--WGVAKKVSIFGVKV   96 (279)
T ss_dssp             CSEEECTT-TTTTEEEEEEESCCCTTCGGGTTCEEEEEECSSSS--SCSSSHHHHHHHHHHCTT--TCSSTTCEEEEEEC
T ss_pred             cceeecCC-CCCCCEEEEEcCCCCCCChhhccccccccCCCCCC--CCCCCcHHHHHHHHhcCc--cccCCCCEEEEEEe
Confidence            34667775 99999999999999999999995 44455565543  378899999999999854  89999999999999


Q ss_pred             ecCCCCCchHHHHHHHHHHHHCC-------CcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCC
Q psy15698        283 FTNQQVSYTSWFLDAFNYAILKK-------MDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPA  355 (577)
Q Consensus       283 ~~~~g~~~~~~~~~ai~~a~~~g-------~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa  355 (577)
                      ++..+.+..+.++++++|+++++       ++|||||||...  ...+.+++.++.++|++||+||||+|.+. ...+|+
T Consensus        97 ~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~~--~~~~~~a~~~a~~~gv~vV~AAGN~g~~~-~~~~Pa  173 (279)
T 3f7m_A           97 LDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGGY--SAALNQAAARLQSSGVFVAVAAGNDNRDA-ANTSPA  173 (279)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC--CHHHHHHHHHHHHTTCEEEEECCSSSSBG-GGEETT
T ss_pred             eCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcCc--cHHHHHHHHHHHHCCCEEEEEcCCCCCCC-CCcCCC
Confidence            99988889999999999999876       899999999873  78899999999999999999999999753 335799


Q ss_pred             CCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccc
Q psy15698        356 DQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYH  425 (577)
Q Consensus       356 ~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~  425 (577)
                      ..+++|+|||++.++.++.||++|+.            +||+|||++|.+          +|||||||+|+|  ++||++
T Consensus       174 ~~~~vi~Vga~~~~~~~~~~S~~g~~------------~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAll~  239 (279)
T 3f7m_A          174 SEPTVCTVGATDSNDVRSTFSNYGRV------------VDIFAPGTSITSTWIGGRTNTISGTSMATPHIAG--LAAYLF  239 (279)
T ss_dssp             TCTTSEEEEEECTTSBBCTTCCBSTT------------CCEEEECSSEEEECGGGCEEEECSHHHHHHHHHH--HHHHHH
T ss_pred             CCCCEEEEeecCCCCCCCCCCCCCCC------------CeEEECCCCeEeecCCCCEEEeeEHHHHHHHHHH--HHHHHH
Confidence            99999999999999999999999976            899999999974          799999999999  779999


Q ss_pred             cCCCcccHHHHHHHHhhcceecC
Q psy15698        426 GAIPIIVNVTILNGMGVVGKILE  448 (577)
Q Consensus       426 ~~~P~l~~~~i~~~l~~ta~~~~  448 (577)
                      +.+|. ++.+|++.|..||....
T Consensus       240 ~~~p~-t~~~v~~~L~~tA~~~~  261 (279)
T 3f7m_A          240 GLEGG-SAGAMCGRIQTLSTKNV  261 (279)
T ss_dssp             HHTCC-CTTTHHHHHHHHSEESC
T ss_pred             HhCCC-CHHHHHHHHHHhccccc
Confidence            99999 99999999999998755


No 27 
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00  E-value=9.9e-44  Score=363.62  Aligned_cols=234  Identities=20%  Similarity=0.186  Sum_probs=192.0

Q ss_pred             CCC-CCcEEEEEcCCCCCCCCCCCCC-CCCccCCCCC---CCCCCCCchhhhHhhhcc--CCCccccCCCCcEeEEEEec
Q psy15698        212 IRG-SGVKVAVFDTGLSSGHTGFNNV-AERTDWTNEN---TLEDKLGHGTFVAGLIAS--SQRCLGFAPDAELHIFRVFT  284 (577)
Q Consensus       212 ~~G-~gV~VaViDtGid~~Hpdl~~~-~~~~~~~~~~---~~~D~~gHGT~VAGiIag--~~~~~GvAP~A~l~~~kv~~  284 (577)
                      ++| +||+||||||||+.+||+|++. ....++....   ...|.+||||||||||+|  +.++.||||+|+|+.+|++.
T Consensus         4 l~G~~gV~VaViDtGid~~Hpdl~g~~~~~~~~~~~~~~~~d~~~~gHGT~VAGiiag~~~~~~~GvAp~a~l~~~kv~~   83 (282)
T 3zxy_A            4 LKGDHNIRVAILDGPVDIAHPCFQGADLTVLPTLAPTAARSDGFMSAHGTHVASIIFGQPETSVPGIAPQCRGLIVPIFS   83 (282)
T ss_dssp             CCCCTTSEEEEEESCCCTTSGGGTTCEEEECCCSSCCCCCTTCHHHHHHHHHHHHHHCCTTSSSCCSSTTSEEEEEECSC
T ss_pred             CcCCCCCEEEEEcCCCCCCChhHCCCeeecCcCCCCCCCCCCCCCCCcccceeehhhccCCceeeeeccccceEeeEeec
Confidence            578 6999999999999999999843 3333333222   223346899999999998  45689999999999999986


Q ss_pred             CC-CCCchHHHHHHHHHHHHCCCcEEEeCCCCCC---CCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCe
Q psy15698        285 NQ-QVSYTSWFLDAFNYAILKKMDVLNLSIGGPD---FMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDV  360 (577)
Q Consensus       285 ~~-g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~---~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~v  360 (577)
                      +. +......++++|+||++++++|||||||...   ..+..+.+++.++.++|+++|+||||+|.  ....+|+..+++
T Consensus        84 ~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~--~~~~~Pa~~~~v  161 (282)
T 3zxy_A           84 DDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGC--DCLHVPAALPAV  161 (282)
T ss_dssp             SSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCS--SCEEETTTSTTC
T ss_pred             cccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHHHHHHhhcCceEEEecccCCC--ccccCcccccee
Confidence            54 4456778999999999999999999999642   33567889999999999999999999997  456799999999


Q ss_pred             EEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec----------CcCCcccccCCccccccccccC---
Q psy15698        361 IGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG----------PSTNGECQYMWPYCTQPLYHGA---  427 (577)
Q Consensus       361 I~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s----------sGTS~A~P~VaG~a~~aL~~~~---  427 (577)
                      |+|||++.++.++.||++|+.         ..||||+|||++|++          +|||||+|+|+|  ++||+++.   
T Consensus       162 i~Vga~~~~~~~~~~S~~~~~---------~~~~di~ApG~~i~s~~~~~~~~~~sGTS~AaP~vaG--~aAll~~~~~~  230 (282)
T 3zxy_A          162 LAVGAMDDHGHPLDFSNWGST---------YEQQGILAPGEDILGAKPGGGTERLSGTAFATPIVSG--VAALLLSEQVR  230 (282)
T ss_dssp             EEEEEECTTSCBCSSSCCCHH---------HHHHEEEEECSSEEEECTTSCEEEECSHHHHHHHHHH--HHHHHHHHHHH
T ss_pred             EEEEEEcCCCccccccCCCCC---------ccccceeccCcceeeecCCCceeecCCCcccchHHHH--HHHHHHHHhHh
Confidence            999999999999999999954         467999999999974          799999999999  77888876   


Q ss_pred             -CCcccHHHHHHHHhhcceecCC--CccccCCCC
Q psy15698        428 -IPIIVNVTILNGMGVVGKILER--PKWYPYLPH  458 (577)
Q Consensus       428 -~P~l~~~~i~~~l~~ta~~~~~--~~~~p~~~~  458 (577)
                       .|.+++.+|+++|..||+.++.  +.+...+|+
T Consensus       231 ~~~~~~~~~vk~~L~~tA~~~~~~~~~~~~~~G~  264 (282)
T 3zxy_A          231 RGETPDPQKVRQLLLQSALPCDDDAPEQARRCLA  264 (282)
T ss_dssp             TTCCCCHHHHHHHHHHHCBCC-------CGGGTT
T ss_pred             hCCCCCHHHHHHHHHhhCeeCCCCCCCccCceee
Confidence             4789999999999999987653  444444444


No 28 
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00  E-value=8.5e-43  Score=384.08  Aligned_cols=233  Identities=20%  Similarity=0.184  Sum_probs=196.5

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC---CCccCCCCCC----CCCCCCchhhhHhhhcc----CCCcc
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVA---ERTDWTNENT----LEDKLGHGTFVAGLIAS----SQRCL  269 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~---~~~~~~~~~~----~~D~~gHGT~VAGiIag----~~~~~  269 (577)
                      .|++..+|+.+++|+||+|||||+||+.+||+|.+..   .+++|.....    ..|.+||||||||+|+|    +.++.
T Consensus        40 ~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~~~p~~d~~gHGT~vAGiiaa~~~n~~~~~  119 (503)
T 2id4_A           40 DINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRLSDDYHGTRCAGEIAAKKGNNFCGV  119 (503)
T ss_dssp             SCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBCGGGCEETTTTBSCCCCCSTTTTHHHHHHHHHHCCSSSSSSCC
T ss_pred             ccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcccccCcccCCCCCCCCCCCCCCCChHHHHHHHHHhccCCCCCcE
Confidence            5899999999999999999999999999999999543   2567765432    25778999999999998    34578


Q ss_pred             ccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCCC------CCHHHHHHHHHHH-----cCCcEEE
Q psy15698        270 GFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPDF------MDFPFVDKVWELT-----ANRVILI  338 (577)
Q Consensus       270 GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~~------~~~~~~~ai~~a~-----~~gilvV  338 (577)
                      ||||+|+|+.+|+++..  .....++++|+|+++++ +|||||||....      ....+.+++.++.     .+|++||
T Consensus       120 GvAp~a~i~~~rv~~~~--~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV  196 (503)
T 2id4_A          120 GVGYNAKISGIRILSGD--ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYV  196 (503)
T ss_dssp             CTTTTSEEEEEECTTSC--CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             EECCCCEEEEEEeeCCC--CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEE
Confidence            99999999999999753  56788999999999988 999999997631      2356777777776     4799999


Q ss_pred             EecCCCCCCCCCCCCC--CCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEe----cCCceec-------
Q psy15698        339 SAIGNDGPLYGTLNNP--ADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVT----YGSAVRG-------  405 (577)
Q Consensus       339 ~AAGN~g~~~~~~~~P--a~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~A----pG~~I~s-------  405 (577)
                      +||||+|.......+|  ...+++|+|||++.++.++.||++|+.            +|++|    ||.+|.+       
T Consensus       197 ~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~~~~a~~S~~g~~------------~~~~a~~~gpG~~I~st~~~~~~  264 (503)
T 2id4_A          197 FASGNGGTRGDNCNYDGYTNSIYSITIGAIDHKDLHPPYSEGCSA------------VMAVTYSSGSGEYIHSSDINGRC  264 (503)
T ss_dssp             EECCSCGGGTCCGGGBTTTTCTTEEEEEEECTTSCCCTTCCCCTT------------EEEEEECSBTTBCEEEECSTTCE
T ss_pred             EecCCCCCcCCCCCCCcccCCCCEEEEEeeCCCCCcCCcCCCCCc------------ceEeecCCCCCCceEeecCCCCc
Confidence            9999999754333333  367789999999999999999999987            67776    6777764       


Q ss_pred             ----CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCCC
Q psy15698        406 ----PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILERP  450 (577)
Q Consensus       406 ----sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~~  450 (577)
                          +|||||||+|+|  ++||+++++|.+++.+|+.+|..||..++.+
T Consensus       265 ~~~~sGTS~AaP~VAG--~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~  311 (503)
T 2id4_A          265 SNSHGGTSAAAPLAAG--VYTLLLEANPNLTWRDVQYLSILSAVGLEKN  311 (503)
T ss_dssp             EEEECSHHHHHHHHHH--HHHHHHHHCTTCCHHHHHHHHHHHCBCCTTC
T ss_pred             eecCCCccccchhhhH--HHHHHHHhCCCCCHHHHHHHHHhccccCCCC
Confidence                699999999999  7799999999999999999999999988754


No 29 
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00  E-value=2.9e-43  Score=385.33  Aligned_cols=223  Identities=22%  Similarity=0.198  Sum_probs=189.8

Q ss_pred             HHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCC--CccCCCC-------CCCCCCCCchhhhHhhhccCCCccccCCCCc
Q psy15698        206 TLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAE--RTDWTNE-------NTLEDKLGHGTFVAGLIASSQRCLGFAPDAE  276 (577)
Q Consensus       206 ~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~--~~~~~~~-------~~~~D~~gHGT~VAGiIag~~~~~GvAP~A~  276 (577)
                      .+|..+++|+||+||||||||+.+||+|.+...  .+++..+       ....|..||||||||||+|..  .||||+|+
T Consensus        17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~~~~~~~~v~~~dg~~f~~~~~D~~GHGThVAGIIag~~--~GVAP~A~   94 (546)
T 2qtw_B           17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVMVTDFENVPEEDGTRFHRQASKCDSHGTHLAGVVSGRD--AGVAKGAS   94 (546)
T ss_dssp             -------CCTTSEEEEEESCCCTTSTTTTTTEEEEEEECCCCCC-------CTTTTHHHHHHHHHHHCTT--TCSSTTCE
T ss_pred             hhcccCCCCCCcEEEEECCCCCCCChHHcccccccCcccccCCCCccccCCCCCCCChHHHHHHHHhccC--CCcCCCCE
Confidence            378889999999999999999999999996543  2222211       234678899999999999865  89999999


Q ss_pred             EeEEEEecCCCCCchHHHHHHHHHHHHC------CCcEEEeCCCCCCCCCHHHHHHHHHHHcCCcEEEEecCCCCCCCCC
Q psy15698        277 LHIFRVFTNQQVSYTSWFLDAFNYAILK------KMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGT  350 (577)
Q Consensus       277 l~~~kv~~~~g~~~~~~~~~ai~~a~~~------g~~ViN~S~G~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~  350 (577)
                      |+.+|+++.++.++.+.++++|+|+++.      +++|||||||+..  +..+.+++.++.++|++||+||||+|.+. .
T Consensus        95 L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~~--s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~-~  171 (546)
T 2qtw_B           95 MRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY--SRVLNAACQRLARAGVVLVTAAGNFRDDA-C  171 (546)
T ss_dssp             EEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEEC--CHHHHHHHHHHHHTTCEEEEECCSBSSBG-G
T ss_pred             EEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCCC--cHHHHHHHHHHHhCCCEEEEECCCCCCCC-C
Confidence            9999999988888899999999999974      8999999999763  68899999999999999999999999753 4


Q ss_pred             CCCCCCCCCeEEEeeecCCCCccC----CCCCCCCCCcCCCCCCCccccEEecCCceec------------CcCCccccc
Q psy15698        351 LNNPADQMDVIGVGGINFEDQIAK----FSSRGMTAWELPGGYGRVKPDIVTYGSAVRG------------PSTNGECQY  414 (577)
Q Consensus       351 ~~~Pa~~~~vI~VGA~~~~~~~a~----fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s------------sGTS~A~P~  414 (577)
                      ..+|+..+++|+|||++.++.++.    |||+|+.            |||+|||++|.+            +|||||+|+
T Consensus       172 ~~sPAs~~~VItVGA~d~~g~~a~~s~~fSn~G~~------------vDI~APG~~I~St~~~~~~~y~~~SGTSmAAP~  239 (546)
T 2qtw_B          172 LYSPASAPEVITVGATNAQDQPVTLGTLGTNFGRC------------VDLFAPGEDIIGASSDCSTCFVSQSGTSQAAAH  239 (546)
T ss_dssp             GEETTTCTTSEEEEEECTTSCBCEETTEECCBSTT------------CCEEEECSSEEEECTTSTTCEEEECSHHHHHHH
T ss_pred             ccCcccCCCEEEEEEecCCCCcccccCCcCCCCCc------------ceEEecCccEEeeccCCCCcEeeeCcCcHHHHH
Confidence            568999999999999999999988    8999864            999999999964            799999999


Q ss_pred             CCccccccccccCCCcccHHHHHHHHhhcceec
Q psy15698        415 MWPYCTQPLYHGAIPIIVNVTILNGMGVVGKIL  447 (577)
Q Consensus       415 VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~  447 (577)
                      |+|  ++||+++.+|.+++.+|+++|..||...
T Consensus       240 VAG--~aALlls~~P~ltp~qVr~~L~~tAt~~  270 (546)
T 2qtw_B          240 VAG--IAAMMLSAEPELTLAELRQRLIHFSAKD  270 (546)
T ss_dssp             HHH--HHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred             HHH--HHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence            999  7899999999999999999999998653


No 30 
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00  E-value=1e-41  Score=383.15  Aligned_cols=237  Identities=21%  Similarity=0.245  Sum_probs=188.6

Q ss_pred             hccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCC--CCccCCCCC---C-CCCCCCchhhhHhhhcc---CCCccc
Q psy15698        200 SILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVA--ERTDWTNEN---T-LEDKLGHGTFVAGLIAS---SQRCLG  270 (577)
Q Consensus       200 ~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~--~~~~~~~~~---~-~~D~~gHGT~VAGiIag---~~~~~G  270 (577)
                      ..|+++.+|+.+++|+||+||||||||+.+||+|....  ..++|....   . .++.+||||||||+|+|   +.++.|
T Consensus        55 ~din~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~~~~~~~~~~~d~~p~d~~~gHGT~vAGiiaa~~n~~g~~G  134 (600)
T 2oxa_A           55 NDLNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDDPTPTDPDTGHGTSVSGIIAAVDNAIGTKG  134 (600)
T ss_dssp             CSCCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTCSSCCCCCSTTCCHHHHHHHHHHCCSSSSSCCC
T ss_pred             cCcChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhccccCceeccCCCCCCCCCCCCCCCccHHHHHhhcccCCCcceE
Confidence            35899999999999999999999999999999998432  235665433   2 33468999999999999   346899


Q ss_pred             cCCCCcEeEEEEecCCCCCc-hHHHHHHHHHHHHCCCcEEEeCCCCCCCC----C---HHHHHHHHH---HHcCCcEEEE
Q psy15698        271 FAPDAELHIFRVFTNQQVSY-TSWFLDAFNYAILKKMDVLNLSIGGPDFM----D---FPFVDKVWE---LTANRVILIS  339 (577)
Q Consensus       271 vAP~A~l~~~kv~~~~g~~~-~~~~~~ai~~a~~~g~~ViN~S~G~~~~~----~---~~~~~ai~~---a~~~gilvV~  339 (577)
                      |||+|+|+.+|+++..+... ..++++....+..++++|||||||.....    +   ..+.+++.+   +.++|++||+
T Consensus       135 VAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~  214 (600)
T 2oxa_A          135 IAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIK  214 (600)
T ss_dssp             SSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred             EccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEE
Confidence            99999999999998876543 34454444446778999999999986421    1   334444433   4578999999


Q ss_pred             ecCCCCCCC--------------------CCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCcCCCCCCCccccEEec
Q psy15698        340 AIGNDGPLY--------------------GTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTY  399 (577)
Q Consensus       340 AAGN~g~~~--------------------~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~~p~~~g~~kpDi~Ap  399 (577)
                      ||||+|...                    +.+..|+..+++|+|||++..+.++.||++|+.            +||+||
T Consensus       215 AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~~~~g~~a~fS~~G~~------------vdv~AP  282 (600)
T 2oxa_A          215 AAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNADGVRSSYSSVGSN------------IFLSAT  282 (600)
T ss_dssp             ECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEECTTSSBCTTCCBCTT------------EEEEEE
T ss_pred             ecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecccCCCCcCCcCCCCCC------------eEEEec
Confidence            999998631                    123334455569999999999999999999987            788888


Q ss_pred             CCce--------------------------------------------ecCcCCcccccCCccccccccccCCCcccHHH
Q psy15698        400 GSAV--------------------------------------------RGPSTNGECQYMWPYCTQPLYHGAIPIIVNVT  435 (577)
Q Consensus       400 G~~I--------------------------------------------~ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~  435 (577)
                      |++|                                            ..+|||||||+|||  ++||+++++|.+++.+
T Consensus       283 G~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAG--vaALl~s~~P~lt~~~  360 (600)
T 2oxa_A          283 GGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSG--AMALLMSAYPDLSVRD  360 (600)
T ss_dssp             CCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHH--HHHHHHHHSTTSCHHH
T ss_pred             cCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHH--HHHHHHHhCCCCCHHH
Confidence            8874                                            13699999999999  7799999999999999


Q ss_pred             HHHHHhhcceecCCC
Q psy15698        436 ILNGMGVVGKILERP  450 (577)
Q Consensus       436 i~~~l~~ta~~~~~~  450 (577)
                      |+.+|..||+.++.+
T Consensus       361 vk~~L~~tA~~~~~~  375 (600)
T 2oxa_A          361 LRDLLARSATRVDAK  375 (600)
T ss_dssp             HHHHHHHHCBCCSTT
T ss_pred             HHHHHHHhCccCCcc
Confidence            999999999987743


No 31 
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00  E-value=4.3e-42  Score=375.73  Aligned_cols=242  Identities=16%  Similarity=0.166  Sum_probs=191.6

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCC---CccCCCCC-------CCCCCCCchhhhHhhhcc----CC
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAE---RTDWTNEN-------TLEDKLGHGTFVAGLIAS----SQ  266 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~---~~~~~~~~-------~~~D~~gHGT~VAGiIag----~~  266 (577)
                      .|+++.+|+.+++|+||+||||||||+.+||+|.....   +++|.+..       ...|.++|||||||+|+|    +.
T Consensus        24 ~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~~~~~d~~~~~~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~  103 (471)
T 1p8j_A           24 DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGV  103 (471)
T ss_dssp             SCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCGGGCEETTTTBSCCCCCCCTTCTTCHHHHHHHHHHCCSSSSS
T ss_pred             CCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCccCcccccCCCCCCCCccCCCCCCCcHHHHHHHHHeeccCCC
Confidence            58999999999999999999999999999999995432   46665432       235778999999999998    34


Q ss_pred             CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH-CCCcEEEeCCCCCC------CCCHHHHHHHHHHHc-----CC
Q psy15698        267 RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL-KKMDVLNLSIGGPD------FMDFPFVDKVWELTA-----NR  334 (577)
Q Consensus       267 ~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~-~g~~ViN~S~G~~~------~~~~~~~~ai~~a~~-----~g  334 (577)
                      ++.||||+|+|+.+|+++.    ..+++++|++|+++ ++++|||||||...      .....+.+++.++.+     +|
T Consensus       104 g~~GvAp~a~i~~~rv~~g----~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~G  179 (471)
T 1p8j_A          104 CGVGVAYNARIGGVRMLDG----EVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLG  179 (471)
T ss_dssp             SCCCTTTTSEEEEEECSSS----CCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTC
T ss_pred             CCEEECCCCeEEEEEccCC----chhHHHHHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCC
Confidence            6799999999999999863    35679999999999 89999999999753      123456666666654     69


Q ss_pred             cEEEEecCCCCCCCC--CCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCc--CCCCCCCccccEEec--CC--ceecC
Q psy15698        335 VILISAIGNDGPLYG--TLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWE--LPGGYGRVKPDIVTY--GS--AVRGP  406 (577)
Q Consensus       335 ilvV~AAGN~g~~~~--~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~--~p~~~g~~kpDi~Ap--G~--~I~ss  406 (577)
                      ++||+||||+|....  ....|+..+++|+|||++.++.++.||++|+..+.  .|++. ...++|...  +.  -...+
T Consensus       180 vlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~g~~a~~S~~g~~~~~~~~~~~~-~~g~~i~st~~~~~~~~~~s  258 (471)
T 1p8j_A          180 SIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGN-QNEKQIVTTDLRQKCTESHT  258 (471)
T ss_dssp             CEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTTSCCCTTCCBCTTCCEEEECCCS-TTSCCEEEEETTTEEEEEEC
T ss_pred             eEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCCCCcccccCCCCcceEEeCCCCC-CCCCCEEEeeCCCCccccCC
Confidence            999999999997432  23345566899999999999999999999987533  12211 111233322  11  12358


Q ss_pred             cCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCC
Q psy15698        407 STNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       407 GTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                      |||||||+|+|  ++||+++++|.+++.+|+++|..||+..+.
T Consensus       259 GTS~AaP~VAG--~aALl~~~~p~lt~~~v~~~L~~tA~~~~~  299 (471)
T 1p8j_A          259 GTSASAPLAAG--IIALTLEANKNLTWRDMQHLVVQTSKPAHL  299 (471)
T ss_dssp             SHHHHHHHHHH--HHHHHHHHCTTCCHHHHHHHHHHHCBCTTC
T ss_pred             Ccccccchhhh--HHHHHHhhCCCCCHHHHHHHHHhcCccCCC
Confidence            99999999999  779999999999999999999999998764


No 32 
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00  E-value=1.5e-41  Score=381.86  Aligned_cols=248  Identities=20%  Similarity=0.191  Sum_probs=189.0

Q ss_pred             ccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCC-CC-CccCCCCC----CCCCCCCchhhhHhhhcc---CCCcccc
Q psy15698        201 ILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNV-AE-RTDWTNEN----TLEDKLGHGTFVAGLIAS---SQRCLGF  271 (577)
Q Consensus       201 ~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~-~~-~~~~~~~~----~~~D~~gHGT~VAGiIag---~~~~~Gv  271 (577)
                      .|++..+|++|++|+||+||||||||+.+||||.+. .. .+++.+..    ...|.++|||||||+|||   +.++.||
T Consensus        56 Dinv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~~~~~~~~~~~~~dp~p~~~~~gHGThVAGiIAa~~n~~g~~GV  135 (600)
T 3hjr_A           56 DLNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRPGSKNVVTGSDDPTPTDPDTAHGTSVSGIIAAVDNAIGTKGI  135 (600)
T ss_dssp             SCCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGBCSCCBCTTTSSSCCCCCSTTCCHHHHHHHHHHCCSSSSSCCCS
T ss_pred             ccCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhccccCcceeecCCCCCCCCCCCCChHHHHHHHHhEeCCCCCcEEe
Confidence            589999999999999999999999999999999843 22 23443221    234667999999999998   4568999


Q ss_pred             CCCCcEeEEEEecCCCCCchHHHHHHH-HHHHHCCCcEEEeCCCCCCC----CCH----HHHHHHHHH--HcCCcEEEEe
Q psy15698        272 APDAELHIFRVFTNQQVSYTSWFLDAF-NYAILKKMDVLNLSIGGPDF----MDF----PFVDKVWEL--TANRVILISA  340 (577)
Q Consensus       272 AP~A~l~~~kv~~~~g~~~~~~~~~ai-~~a~~~g~~ViN~S~G~~~~----~~~----~~~~ai~~a--~~~gilvV~A  340 (577)
                      ||+|+|+.+|+++..+.+..++++.++ .++..++++|+|+|||....    ...    .+.+++..+  ..+|+++|+|
T Consensus       136 Ap~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~A  215 (600)
T 3hjr_A          136 APRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKA  215 (600)
T ss_dssp             STTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred             CCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEe
Confidence            999999999999988877777777776 66778899999999996421    111    223333322  3579999999


Q ss_pred             cCCCCC--------------------CCCCCCCCCCCCCeEEEeeecCCCCccCCCCCCCCCCc-CCCCCC----Ccccc
Q psy15698        341 IGNDGP--------------------LYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWE-LPGGYG----RVKPD  395 (577)
Q Consensus       341 AGN~g~--------------------~~~~~~~Pa~~~~vI~VGA~~~~~~~a~fS~~G~~~~~-~p~~~g----~~kpD  395 (577)
                      |||.+.                    ..+.+..|+..+.+|+|||++.++.++.||++|+..+. .|++..    ...+.
T Consensus       216 aGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVgA~~~~g~~a~yS~~G~~v~~~apg~~~~~~~~~~vt  295 (600)
T 3hjr_A          216 AGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNADGVRSSYSSVGSNIFLSATGGEYGTDTPAMVT  295 (600)
T ss_dssp             CCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEEEECTTSSBCTTCCBCTTCCEEEECCSCSSSSCCEEE
T ss_pred             ccCccccccccccccccCCCCCCCCcccccccCccccCcceEEeeecCCCCEeecccCCcceeeccCCCCCCCCCcceee
Confidence            999753                    12344556778889999999999999999999987432 222211    11122


Q ss_pred             EEecCCce---------------------------ecCcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecC
Q psy15698        396 IVTYGSAV---------------------------RGPSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILE  448 (577)
Q Consensus       396 i~ApG~~I---------------------------~ssGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~  448 (577)
                      ..+||..+                           ..+|||||||+|+|  ++||+++++|.|++.+|+++|..||+.++
T Consensus       296 ~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAG--vaALll~a~P~lt~~~v~~~L~~TA~~~d  373 (600)
T 3hjr_A          296 TDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSG--AMALLMSAYPDLSVRDLRDLLARSATRVD  373 (600)
T ss_dssp             ECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHH--HHHHHHHHSTTSCHHHHHHHHHHHCBCCS
T ss_pred             ecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHH--HHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence            23344322                           13699999999999  77999999999999999999999999887


Q ss_pred             CC
Q psy15698        449 RP  450 (577)
Q Consensus       449 ~~  450 (577)
                      .+
T Consensus       374 ~~  375 (600)
T 3hjr_A          374 AK  375 (600)
T ss_dssp             TT
T ss_pred             CC
Confidence            53


No 33 
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00  E-value=6.3e-42  Score=385.83  Aligned_cols=234  Identities=21%  Similarity=0.277  Sum_probs=189.4

Q ss_pred             HHhcCCCCCCcEEEEEcCCCCCCCCCCCCC-------------------------CCCccCC--------CCCCCCCCCC
Q psy15698        207 LWDLGIRGSGVKVAVFDTGLSSGHTGFNNV-------------------------AERTDWT--------NENTLEDKLG  253 (577)
Q Consensus       207 ~w~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~--------~~~~~~D~~g  253 (577)
                      +|..+.+|+||+|||||||||++||+|.+.                         +..++|.        +...+.|.+|
T Consensus        14 ~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~~~~~~~~p~D~~G   93 (621)
T 3vta_A           14 VPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPISPGDVNGPRDTNG   93 (621)
T ss_dssp             CCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSCCTTCCSSSBCSSS
T ss_pred             ccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCccCCCCCCCCCCCCc
Confidence            355567899999999999999999999731                         0011121        1123568899


Q ss_pred             chhhhHhhhccCC------------CccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHHCCCcEEEeCCCCCC---C
Q psy15698        254 HGTFVAGLIASSQ------------RCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGGPD---F  318 (577)
Q Consensus       254 HGT~VAGiIag~~------------~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~~g~~ViN~S~G~~~---~  318 (577)
                      |||||||||||+.            .+.|+||+|+|+++|++...+ +..+++++||++|+++|++|||||||+..   .
T Consensus        94 HGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~  172 (621)
T 3vta_A           94 HGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-CSDTDILAAYDDAIADGVDIISLSVGGANPRHY  172 (621)
T ss_dssp             HHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE-ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGG
T ss_pred             CHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC-CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCc
Confidence            9999999999832            257999999999999999875 67789999999999999999999999864   2


Q ss_pred             CCHHHHHHHHHHHcCCcEEEEecCCCCCCCCCCCCCCCCCCeEEEeeecC------------------------------
Q psy15698        319 MDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINF------------------------------  368 (577)
Q Consensus       319 ~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~Pa~~~~vI~VGA~~~------------------------------  368 (577)
                      ...++..++..|.++|+++|+||||+|+...++  ++..+.+++|++...                              
T Consensus       173 ~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~--~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  250 (621)
T 3vta_A          173 FVDAIAIGSFHAVERGILTSNSAGNGGPNFFTT--ASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFDNQYYP  250 (621)
T ss_dssp             GGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCC--CCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBCCCCSCCEEEC
T ss_pred             CCcHHHHHHHHHHHCCCEEEEeCCCCCCCCccc--CCCCCCceeEEEeeccccceeeEEeccCceeeeeecccCCCcccc
Confidence            245678888999999999999999999865554  444555566555321                              


Q ss_pred             --------------------------------------------------------------------------------
Q psy15698        369 --------------------------------------------------------------------------------  368 (577)
Q Consensus       369 --------------------------------------------------------------------------------  368 (577)
                                                                                                      
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~~~~~~~lP~~~v~~~~  330 (621)
T 3vta_A          251 LVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPND  330 (621)
T ss_dssp             EEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCSSCCCCSSSEEEECHHH
T ss_pred             cccccccccccccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCCcccccccceEEECHHH
Confidence                                                                                            


Q ss_pred             ----------------------------CCCccCCCCCCCCCCcCCCCCCCccccEEecCCceec---------------
Q psy15698        369 ----------------------------EDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG---------------  405 (577)
Q Consensus       369 ----------------------------~~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s---------------  405 (577)
                                                  .+.++.||+|||.    +..++++||||+|||++|++               
T Consensus       331 g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~----~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~  406 (621)
T 3vta_A          331 LLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPN----RATKDVIKPDISGPGVEILAAWPSVAPVGGIRRNT  406 (621)
T ss_dssp             HHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSC----TTCTTSCSCCEEEECSSEEEECCSSSCBTTBCCCC
T ss_pred             HHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCC----CCCCCeeccccccCCcceEeecCccccccCcCCCC
Confidence                                        1235789999987    45688999999999999974               


Q ss_pred             -----CcCCcccccCCccccccccccCCCcccHHHHHHHHhhcceecCC
Q psy15698        406 -----PSTNGECQYMWPYCTQPLYHGAIPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       406 -----sGTS~A~P~VaG~a~~aL~~~~~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                           ||||||||||+|  ++||+++.+|.|++++|+++|+.||..+..
T Consensus       407 ~y~~~SGTSMAaPhVAG--vaALl~q~~P~~spa~IksaLmtTA~~~~~  453 (621)
T 3vta_A          407 LFNIISGTSMSCPHITG--IATYVKTYNPTWSPAAIKSALMTTASPMNA  453 (621)
T ss_dssp             SEEEECSHHHHHHHHHH--HHHHHHHHCTTCCHHHHHHHHHHTCBCCCT
T ss_pred             cceEecCccccchhhhh--HHHHHHHHCCCCCHHHHHHHHHhcCCcccc
Confidence                 799999999999  779999999999999999999999998763


No 34 
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00  E-value=1.2e-36  Score=357.10  Aligned_cols=225  Identities=19%  Similarity=0.216  Sum_probs=180.4

Q ss_pred             CcEEEEEcCCCCCCCCCCCCCCCCc----------cCC-------CCCC----CCCCCCchhhhHhhhccC---CCcccc
Q psy15698        216 GVKVAVFDTGLSSGHTGFNNVAERT----------DWT-------NENT----LEDKLGHGTFVAGLIASS---QRCLGF  271 (577)
Q Consensus       216 gV~VaViDtGid~~Hpdl~~~~~~~----------~~~-------~~~~----~~D~~gHGT~VAGiIag~---~~~~Gv  271 (577)
                      +|+|||||||++.++.+..-+ ..+          ++.       ++.+    ..|.+||||||||||+|.   .++.||
T Consensus       214 ~V~VAVIDTG~d~DL~d~~~l-~~Y~~~~dyg~F~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~N~~g~~GV  292 (1354)
T 3lxu_X          214 DGWLTIVDTTEQGDLDQALRI-GEYSRTHETRNVDDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNHSSRDVDGV  292 (1354)
T ss_dssp             SSCEEEECSSSSCCSSCSEEE-ECTTTTCCCCEESSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCCSSSSSCCS
T ss_pred             CEEEEEEeCCCCCCccccccc-ccccccccccccccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCCCCCCceee
Confidence            499999999998777665311 111          222       1111    246789999999999993   678999


Q ss_pred             CCCCcEeEEEEecCCCCC--chHHHHHHHHHHHH-----CCCcEEEeCCCCCCC--CCHHHHHHHHHHH-cCCcEEEEec
Q psy15698        272 APDAELHIFRVFTNQQVS--YTSWFLDAFNYAIL-----KKMDVLNLSIGGPDF--MDFPFVDKVWELT-ANRVILISAI  341 (577)
Q Consensus       272 AP~A~l~~~kv~~~~g~~--~~~~~~~ai~~a~~-----~g~~ViN~S~G~~~~--~~~~~~~ai~~a~-~~gilvV~AA  341 (577)
                      ||+|+|+.+|+++.....  ....++++|.+|++     +|++|||||||....  ....+.+++.++. ++|++||+||
T Consensus       293 AP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAA  372 (1354)
T 3lxu_X          293 APNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASA  372 (1354)
T ss_dssp             CTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEEC
T ss_pred             cCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeC
Confidence            999999999999875433  44677777777777     799999999998753  2457888888886 8999999999


Q ss_pred             CCCCCCCCCCCCCCC--CCCeEEEeeecCC--------------CCccCCCCCCCCCCcCCCCCCCccccEEecCCceec
Q psy15698        342 GNDGPLYGTLNNPAD--QMDVIGVGGINFE--------------DQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRG  405 (577)
Q Consensus       342 GN~g~~~~~~~~Pa~--~~~vI~VGA~~~~--------------~~~a~fS~~G~~~~~~p~~~g~~kpDi~ApG~~I~s  405 (577)
                      ||+|.+.+++.+|+.  .+++|+|||++..              +.++.|||+||+      .+++.||||+|||++|.+
T Consensus       373 GN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~~~~~g~~asFSS~GPt------~dg~~KpDIaAPG~~I~S  446 (1354)
T 3lxu_X          373 GNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAMREKLPGNVYTWTSRDPC------IDGGQGVTVCAPGGAIAS  446 (1354)
T ss_dssp             CSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------CCCCCCCCSCC------SSSSCCEEEEEEC-----
T ss_pred             CCCCCCCCccCCcccccCCceEEEEeecCCCCcccccccccCCCCccccccCCCCC------ccCCCcceEEecCceEEE
Confidence            999998788889996  9999999999865              578999999965      478999999999999964


Q ss_pred             ------------CcCCcccccCCcccccccccc----CCCcccHHHHHHHHhhcceecCC
Q psy15698        406 ------------PSTNGECQYMWPYCTQPLYHG----AIPIIVNVTILNGMGVVGKILER  449 (577)
Q Consensus       406 ------------sGTS~A~P~VaG~a~~aL~~~----~~P~l~~~~i~~~l~~ta~~~~~  449 (577)
                                  +|||||||+|||  ++||+++    .+|.+++.+|+++|..||...+.
T Consensus       447 t~~~~~~~y~~~SGTSmAAP~VAG--vAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~  504 (1354)
T 3lxu_X          447 VPQFTMSKSQLMNGTSMAAPHVAG--AVALLISGLKQQNIEYSPYSIKRAISVTATKLGY  504 (1354)
T ss_dssp             ----------CCCCGGGCHHHHHH--HHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT
T ss_pred             eecCCCCceecCCCCCHHHHHHHH--HHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC
Confidence                        799999999999  6788876    89999999999999999998874


No 35 
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.89  E-value=4e-24  Score=237.02  Aligned_cols=222  Identities=18%  Similarity=0.243  Sum_probs=152.7

Q ss_pred             cchhhhccCchHHHhcCCCCCCcEEEEEcCCCCCCCCCCCCCCC-----CccCC--C-CCCCCCCCCchhhhHhhhcc--
Q psy15698        195 PRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAE-----RTDWT--N-ENTLEDKLGHGTFVAGLIAS--  264 (577)
Q Consensus       195 p~~~~~~i~~~~~w~~g~~G~gV~VaViDtGid~~Hpdl~~~~~-----~~~~~--~-~~~~~D~~gHGT~VAGiIag--  264 (577)
                      |..+....+++    .+++|+|++|||||.|.++.|+||.....     ..++.  . .....+..+..++ +++-+.  
T Consensus       196 P~~l~~~Y~~~----~~~~G~g~tIaIid~g~~~~~~DL~~f~~~~g~~~~~~~~v~~~g~~~~~~~~~~~-~~~Ea~LD  270 (552)
T 1t1e_A          196 PLDVAQAYQFP----EGLDGQGQCIAIIELGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNG-PDGEVELD  270 (552)
T ss_dssp             HHHHHHHTTCC----SSCCCTTCEEEEEESSCCCCHHHHHHHHHHHTCCCCCEEEEESTTCCCCCCSCTTS-HHHHHHHH
T ss_pred             HHHHhhhhcCC----CCCCCCCeEEEEEeCCCCCCHHHHHHHHHHcCCCCCceEEEecCCCCCCCCCCCCC-Cceeeecc
Confidence            44444444543    25789999999999999999999872211     11111  0 0001111111111 222222  


Q ss_pred             CCCccccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH---CCCcEEEeCCCCCCCC-C----HHHHHHHHHHHcCCcE
Q psy15698        265 SQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL---KKMDVLNLSIGGPDFM-D----FPFVDKVWELTANRVI  336 (577)
Q Consensus       265 ~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~---~g~~ViN~S~G~~~~~-~----~~~~~ai~~a~~~gil  336 (577)
                      ...+.||||+|+|+.+++.+     ..+.++++|+||++   ++++|||||||..... .    ..+..++.+|..+||+
T Consensus       271 v~~~~gvAp~a~i~~~~~~~-----~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~  345 (552)
T 1t1e_A          271 IEVAGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVT  345 (552)
T ss_dssp             HHHHHHHCTTSEEEEEECCS-----SHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCE
T ss_pred             hhhhhccCCCCeEEEEEcCC-----CCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeE
Confidence            22458999999999999632     35679999999998   7999999999986421 1    3567778888899999


Q ss_pred             EEEecCCCCCCC------CCCCCCCCCCCeEEEeeecCCC-------Ccc------------CCCCCCCCC-Cc----CC
Q psy15698        337 LISAIGNDGPLY------GTLNNPADQMDVIGVGGINFED-------QIA------------KFSSRGMTA-WE----LP  386 (577)
Q Consensus       337 vV~AAGN~g~~~------~~~~~Pa~~~~vI~VGA~~~~~-------~~a------------~fS~~G~~~-~~----~p  386 (577)
                      ||+||||+|...      ..+.+|+.+++||+|||++...       +.+            .||++.+.- |.    .|
T Consensus       346 vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~e~aw~~~~~~~~sgGGfS~~~~~P~yQ~~~~~~  425 (552)
T 1t1e_A          346 VLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVP  425 (552)
T ss_dssp             EEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEEEETTEEEEEEECBCHHHHCBCCCEECSSSCCCTTTTTSCCC
T ss_pred             EEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccccCCCCCccceeeeccCCCCccCCCCCCCCCCCcchhhccccc
Confidence            999999999643      3578999999999999998543       333            367765431 11    11


Q ss_pred             ------CCCCCccccEEecC---Cce---------ecCcCCcccccCCccccccccccCC
Q psy15698        387 ------GGYGRVKPDIVTYG---SAV---------RGPSTNGECQYMWPYCTQPLYHGAI  428 (577)
Q Consensus       387 ------~~~g~~kpDi~ApG---~~I---------~ssGTS~A~P~VaG~a~~aL~~~~~  428 (577)
                            ...||.+|||+|||   .++         ..+|||||||+|||  ++||+.++.
T Consensus       426 ~~~~~~~~~gR~~PDVsA~a~p~~~~~v~~~g~~~~~~GTS~AaP~vAG--v~ALl~~~~  483 (552)
T 1t1e_A          426 PSANPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTAAVAPLFAA--LVARINQKL  483 (552)
T ss_dssp             CCSSTTCCCCCEECSEEEECCGGGCEEEEETTEEEEEESGGGHHHHHHH--HHHHHHHHH
T ss_pred             ccccccCcCCCCCCceecccCCCCCeEEEeCCeEEeccccchhhHHHHH--HHHHHhhhc
Confidence                  23689999999994   343         24899999999999  778888764


No 36 
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.76  E-value=2.1e-19  Score=190.14  Aligned_cols=157  Identities=18%  Similarity=0.156  Sum_probs=120.5

Q ss_pred             ccCCCCcEeEEEEecCCCCCchHHHHHHHHHHHH-CCCcEEEeCCCCCCC------CCHHHHHHHHHHHcCCcEEEEecC
Q psy15698        270 GFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAIL-KKMDVLNLSIGGPDF------MDFPFVDKVWELTANRVILISAIG  342 (577)
Q Consensus       270 GvAP~A~l~~~kv~~~~g~~~~~~~~~ai~~a~~-~g~~ViN~S~G~~~~------~~~~~~~ai~~a~~~gilvV~AAG  342 (577)
                      .+||+++++.+++.+..+ ...+.++++|+||++ ++++|||||||....      ....+.+++++|..+||+||+|||
T Consensus        91 ~~aP~a~~~~~~~~~~~~-~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG  169 (372)
T 1ga6_A           91 SAGGAVQQLLFYMADQSA-SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG  169 (372)
T ss_dssp             HTTSCEEEEEEEEECTTS-STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             hcCCCCcEEEEEeCCCCC-cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence            368999999999987643 456789999999997 899999999998641      123567788888899999999999


Q ss_pred             CCCCCCC-----------CCCCCCCCCCeEEEeeecCCCC--------c----------------cCCCCCCCCC-Cc--
Q psy15698        343 NDGPLYG-----------TLNNPADQMDVIGVGGINFEDQ--------I----------------AKFSSRGMTA-WE--  384 (577)
Q Consensus       343 N~g~~~~-----------~~~~Pa~~~~vI~VGA~~~~~~--------~----------------a~fS~~G~~~-~~--  384 (577)
                      |+|...+           .+.+|+..++||+||+++....        .                ..||++++.. |.  
T Consensus       170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~~~~~~~~~~e~~~~~~~~~~~~~~~sgGGfS~~~~~P~yQ~~  249 (372)
T 1ga6_A          170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPSWQSV  249 (372)
T ss_dssp             SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEEECTTSCEEEEEECEEEECTTSCEEECCCEEEEEEECCGGGGG
T ss_pred             CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeeccCCCCccccceeeeccccccccccccCCCCcCCCCCCcccccc
Confidence            9997432           3578999999999999985421        1                2366665431 11  


Q ss_pred             -CCCCCCCccccEE---ecCCcee---------cCcCCcccccCCccccccccccCCC
Q psy15698        385 -LPGGYGRVKPDIV---TYGSAVR---------GPSTNGECQYMWPYCTQPLYHGAIP  429 (577)
Q Consensus       385 -~p~~~g~~kpDi~---ApG~~I~---------ssGTS~A~P~VaG~a~~aL~~~~~P  429 (577)
                       .....+|.+|||+   +||.++.         .+|||||+|+|+|  ++||+.++.+
T Consensus       250 ~~~~~~gR~~PDVsa~aapg~~~~~~~~g~~~~~~GTS~AaP~vAG--i~ALl~~~~~  305 (372)
T 1ga6_A          250 VSGTPGRRLLPDISFDAAQGTGALIYNYGQLQQIGGTSLASPIFVG--LWARLQSANS  305 (372)
T ss_dssp             STTSCSEEEECSEEEECCGGGCEEEEETTEEEEECSHHHHHHHHHH--HHHHHHHHTT
T ss_pred             cccCCCCccCCceecccCCCCCEEEEeCCcEEeccccchHHHHHHH--HHHHHHhcCC
Confidence             1123478899999   8988764         4899999999999  7788888654


No 37 
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.64  E-value=5e-09  Score=115.53  Aligned_cols=132  Identities=21%  Similarity=0.274  Sum_probs=90.2

Q ss_pred             HHHHHHHHHH--HCCCcEEEeCCCCCCC-CC----HHHHHHHHHHHcCCcEEEEecCCCCCCCC--------CCCCCCCC
Q psy15698        293 WFLDAFNYAI--LKKMDVLNLSIGGPDF-MD----FPFVDKVWELTANRVILISAIGNDGPLYG--------TLNNPADQ  357 (577)
Q Consensus       293 ~~~~ai~~a~--~~g~~ViN~S~G~~~~-~~----~~~~~ai~~a~~~gilvV~AAGN~g~~~~--------~~~~Pa~~  357 (577)
                      .+++.+.+..  .+.++||++|||.... ..    ..+..++.++..+||.||+|+||+|....        .+.+|+..
T Consensus       284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~  363 (544)
T 3edy_A          284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS  363 (544)
T ss_dssp             HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred             cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence            3444444433  2468999999998742 12    34566677788899999999999997421        35789999


Q ss_pred             CCeEEEeeecCC------CCccCCCCCC-CC------CCc-------------CC-----CCCCCccccEEecCCcee--
Q psy15698        358 MDVIGVGGINFE------DQIAKFSSRG-MT------AWE-------------LP-----GGYGRVKPDIVTYGSAVR--  404 (577)
Q Consensus       358 ~~vI~VGA~~~~------~~~a~fS~~G-~~------~~~-------------~p-----~~~g~~kpDi~ApG~~I~--  404 (577)
                      |.|++||+|.-.      .+.+.|.+-| -.      .|-             .|     ...||..|||+|.|.+..  
T Consensus       364 P~VtaVGgT~l~~~~~~~~e~~~~~sgGGfS~~f~~P~yQ~~~v~~yl~~~~~~~~~~~~n~~gR~~PDVaa~~~~~~v~  443 (544)
T 3edy_A          364 PYVTTVGGTSFQEPFLITNEIVDYISGGGFSNVFPRPSYQEEAVTKFLSSSPHLPPSSYFNASGRAYPDVAALSDGYWVV  443 (544)
T ss_dssp             TTSEEEEEEEESSSSCCCCEEECTTCCCEEEEEEECCGGGHHHHHHHHHHCSSCCCGGGSCTTEEEECSEEEECSSEEEE
T ss_pred             CcEEEEeeeeccCCCcccccceeecCCCccCCCCCCChhHHHHHHHHHhccCCCCcccccccCCCcCCCeecccCCEEEE
Confidence            999999999842      1233332222 10      010             01     135789999999988752  


Q ss_pred             --------cCcCCcccccCCcccccccccc
Q psy15698        405 --------GPSTNGECQYMWPYCTQPLYHG  426 (577)
Q Consensus       405 --------ssGTS~A~P~VaG~a~~aL~~~  426 (577)
                              ..|||.|+|.++|  ..||+.+
T Consensus       444 ~~g~~~~~~gGTS~aaP~~A~--~~al~n~  471 (544)
T 3edy_A          444 SNRVPIPWVSGTSASTPVFGG--ILSLINE  471 (544)
T ss_dssp             ETTEEEEEECSHHHHHHHHHH--HHHHHHH
T ss_pred             ECCeeeeeecCcccchhHHHH--HHHHHHH
Confidence                    4799999999999  6677654


No 38 
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.61  E-value=1.1e-07  Score=77.97  Aligned_cols=71  Identities=21%  Similarity=0.272  Sum_probs=54.3

Q ss_pred             cccceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEecCe
Q psy15698         51 NLHKEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVTPQR  130 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Vep~~  130 (577)
                      .++++|||+||++...+...   .+.++..    +.+++      +.|.. |++|.++++++.+++|+++|+|++||||.
T Consensus         6 ~i~~~YIV~~k~~~~~~~~~---~~~~~~~----g~~i~------~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~   71 (80)
T 3cnq_P            6 NGEKKYIVGFKQGFKSCAKK---EDVISEK----GGKLQ------KCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDK   71 (80)
T ss_dssp             --CCEEEEEECTTCCSHHHH---HHHHHTT----TCEEE------EECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECC
T ss_pred             cCCCCEEEEECCCCChHHHH---HHHHHHc----CCcce------EEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCc
Confidence            68999999999988765432   2223222    33455      45666 99999999999999999999999999999


Q ss_pred             EEEcc
Q psy15698        131 LVHRS  135 (577)
Q Consensus       131 ~~~~~  135 (577)
                      .+++.
T Consensus        72 ~v~~~   76 (80)
T 3cnq_P           72 LYRAL   76 (80)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            99875


No 39 
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.33  E-value=9.2e-07  Score=77.62  Aligned_cols=76  Identities=16%  Similarity=0.150  Sum_probs=58.6

Q ss_pred             cccceeEEEEcCCCChhH---HHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEe
Q psy15698         51 NLHKEFIVTFRGYYKSAA---RSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVT  127 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~---~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Ve  127 (577)
                      .++++|||.||+....+.   +.+.+.+.++..  ..+-+++      +.|...|++|.+.++++.+++|+++|+|++||
T Consensus        35 ~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~--~~~~~i~------~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE  106 (114)
T 2w2n_P           35 RLPGTYVVVLKEETHLSQSERTARRLQAQAARR--GYLTKIL------HVFHGLLPGFLVKMSGDLLELALKLPHVDYIE  106 (114)
T ss_dssp             EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT--TCCCEEE------EEECSSSSEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred             CCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhc--ccCCceE------EEecccceEEEEEcCHHHHHHHHcCCCccEEE
Confidence            789999999999876543   334455555442  1233455      45777899999999999999999999999999


Q ss_pred             cCeEEEc
Q psy15698        128 PQRLVHR  134 (577)
Q Consensus       128 p~~~~~~  134 (577)
                      ||+.++.
T Consensus       107 ~D~~v~~  113 (114)
T 2w2n_P          107 EDSSVFA  113 (114)
T ss_dssp             EEEEEEE
T ss_pred             eCceEec
Confidence            9999864


No 40 
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.24  E-value=2e-06  Score=76.53  Aligned_cols=76  Identities=16%  Similarity=0.130  Sum_probs=57.2

Q ss_pred             cccceeEEEEcCCCChhHHHHHH---HHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEe
Q psy15698         51 NLHKEFIVTFRGYYKSAARSRYI---AAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVT  127 (577)
Q Consensus        51 ~v~~eyIV~fk~~~~~~~~~~~i---~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Ve  127 (577)
                      .++++|||+||+..........+   .+.+++.  ..+.++.      +.|...|++|.++++++.+++|+++|+|++||
T Consensus        45 ~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r--~~g~~i~------~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE  116 (124)
T 2qtw_A           45 RLPGTYVVVLKEETHLSQSERTARRLQAQAARR--GYLTKIL------HVFHGLLPGFLVKMSGDLLELALKLPHVDYIE  116 (124)
T ss_dssp             EEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT--TCCCEEE------EEECSSSCEEEEECCGGGHHHHHTSTTEEEEE
T ss_pred             CCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhc--ccCCceE------EEecccceEEEEEcCHHHHHHHHcCCCCcEEE
Confidence            89999999999998766544332   2222221  0123454      45667899999999999999999999999999


Q ss_pred             cCeEEEc
Q psy15698        128 PQRLVHR  134 (577)
Q Consensus       128 p~~~~~~  134 (577)
                      ||..++.
T Consensus       117 ~D~~v~a  123 (124)
T 2qtw_A          117 EDSSVFA  123 (124)
T ss_dssp             EEEEEEE
T ss_pred             eCceEec
Confidence            9998864


No 41 
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.14  E-value=6e-06  Score=66.99  Aligned_cols=70  Identities=14%  Similarity=0.161  Sum_probs=51.9

Q ss_pred             ceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccC-CCceeEEEEeccHHHHHHHhcC--CCeEEEecCe
Q psy15698         54 KEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDF-PSDFDVVLLEEVTAALSSLLEH--PLIKRVTPQR  130 (577)
Q Consensus        54 ~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~-~~~f~~~~v~~~~~~~~~L~~~--p~V~~Vep~~  130 (577)
                      +.|||+||++...+...... +.+...    +.++.      +.| .+.|++|.+.++++.++.|+++  |.|++||+|.
T Consensus         3 ~sYIV~lk~~~~~~~~~~~~-~~~~~~----gg~i~------~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~   71 (76)
T 1v5i_B            3 GKFIVIFKNDVSEDKIRETK-DEVIAE----GGTIT------NEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDH   71 (76)
T ss_dssp             EEEEEEECTTCCHHHHHHHH-HHHHHH----TCCCC------EEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECC
T ss_pred             ceEEEEECCCCCHHHHHHHH-HHHHhh----CCceE------EEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCc
Confidence            78999999998876544332 222221    11122      456 3689999999999999999999  8999999999


Q ss_pred             EEEc
Q psy15698        131 LVHR  134 (577)
Q Consensus       131 ~~~~  134 (577)
                      +++.
T Consensus        72 ~v~~   75 (76)
T 1v5i_B           72 VAHA   75 (76)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9864


No 42 
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.72  E-value=0.0022  Score=50.05  Aligned_cols=63  Identities=13%  Similarity=0.076  Sum_probs=46.8

Q ss_pred             ceeEEEEcCCCChhHHHHHHHHHhcCCCCccceeEEeccCCCccCCCceeEEEEeccHHHHHHHhcCCCeEEEecCeEEE
Q psy15698         54 KEFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVTPQRLVH  133 (577)
Q Consensus        54 ~eyIV~fk~~~~~~~~~~~i~~~l~~~~~~~~~~iv~r~~~~~~~~~~f~~~~v~~~~~~~~~L~~~p~V~~Vep~~~~~  133 (577)
                      .+|||.|++.....       +.+..    .+-++..+..       .++++.++++++.++.|+++|+|+|||+|..++
T Consensus         2 ~~~IV~f~~~~~~~-------~~i~~----~gG~i~~~~~-------~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~   63 (65)
T 2z30_B            2 IRVIVSVDKAKFNP-------HEVLG----IGGHIVYQFK-------LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV   63 (65)
T ss_dssp             EEEEEEECGGGCCG-------GGGGG----GTCEEEEECS-------SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred             eeEEEEEcCcchhH-------HHHHH----CCCEEEEEec-------CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence            47999999852211       12222    2556775533       579999999998899999999999999998875


Q ss_pred             c
Q psy15698        134 R  134 (577)
Q Consensus       134 ~  134 (577)
                      .
T Consensus        64 a   64 (65)
T 2z30_B           64 L   64 (65)
T ss_dssp             E
T ss_pred             c
Confidence            3


No 43 
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=87.72  E-value=0.27  Score=59.01  Aligned_cols=24  Identities=33%  Similarity=0.688  Sum_probs=22.8

Q ss_pred             CCCCCCcEEEEEcCCCCCCCCCCC
Q psy15698        211 GIRGSGVKVAVFDTGLSSGHTGFN  234 (577)
Q Consensus       211 g~~G~gV~VaViDtGid~~Hpdl~  234 (577)
                      .|.|+||+|||||||||..+|-|+
T Consensus        32 ~ydGrgv~iai~DtGVDP~a~glq   55 (1354)
T 3lxu_X           32 EYDGRDVTIAIFDSGVDPRATGLE   55 (1354)
T ss_dssp             TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred             CCCCCccEEEEEeCCCCCCCCcce
Confidence            589999999999999999999996


No 44 
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=28.12  E-value=27  Score=32.14  Aligned_cols=54  Identities=19%  Similarity=0.331  Sum_probs=34.1

Q ss_pred             cceeeEEEeecCCCCCccceeEeeceeEEEEeCceeEeee--ccccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698        483 SGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGIKRILWD--QYHNLRYPQ--GYFPRDNLKMKNDPLD  547 (577)
Q Consensus       483 ~g~~~~~v~~~~~~~~~~~~~~~~~p~~~iipr~~~i~~~--q~~~~~~~~--~~~~~~~~~~~~~~~~  547 (577)
                      .+.+++.|+.|....     ...+     +=....+|..|  .|.++.||-  ||||+- |.-.+||||
T Consensus        12 p~~~nvvIEIP~gs~-----~KyE-----~dk~~g~i~~DR~l~~~~~YP~NYGfIP~T-l~~DgDPlD   69 (173)
T 2bqx_A           12 ADSLCVVIEISKHSN-----IKYE-----LDKESGALMVDRVLYGAQNYPANYGFVPNT-LGSDGDPVD   69 (173)
T ss_dssp             TTEEEEEEEECTTCS-----EEEE-----ECTTTCCEEEEEECSSSCCCSSEEEECSSC-CCTTSSCCE
T ss_pred             CCeEEEEEEECCCCC-----eEEE-----EecCCCCEEEeeecCCCCcCcccccccccc-cCCCCCceE
Confidence            456777788776431     1111     11222333344  467899998  999976 788899998


No 45 
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0
Probab=27.19  E-value=36  Score=31.51  Aligned_cols=53  Identities=21%  Similarity=0.294  Sum_probs=33.3

Q ss_pred             ceeeEEEeecCCCCCccceeEeeceeEE-EEeCceeEeeec--cccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698        484 GHTGFNNVAERTDWTNENTLEDKLGHGT-FVAGIKRILWDQ--YHNLRYPQ--GYFPRDNLKMKNDPLD  547 (577)
Q Consensus       484 g~~~~~v~~~~~~~~~~~~~~~~~p~~~-iipr~~~i~~~q--~~~~~~~~--~~~~~~~~~~~~~~~~  547 (577)
                      +.+++.|+.|....          |.|- +=.....|..|.  +-++.||-  ||||+- |.-.+||||
T Consensus        15 ~~vnvvIEIP~gs~----------~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~T-l~~DgDPlD   72 (178)
T 3tr4_A           15 DDFNVIIEIPANGG----------EVKYEYDKELGFLTVDRFMPTSMRYPCNYGFVPST-LAQDGDPLD   72 (178)
T ss_dssp             TEEEEEEEECTTCC----------SEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTC-CCTTSSCCE
T ss_pred             CEEEEEEEecCCCC----------cEEEEEecCCCcEEEEEecCcCccCCccccccCCc-ccCCCCceE
Confidence            67788888876421          1111 112223333443  36778998  999985 788999998


No 46 
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=26.27  E-value=38  Score=31.79  Aligned_cols=54  Identities=19%  Similarity=0.308  Sum_probs=34.5

Q ss_pred             cceeeEEEeecCCCCCccceeEeeceeEE-EEeCceeEeeecc--ccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698        483 SGHTGFNNVAERTDWTNENTLEDKLGHGT-FVAGIKRILWDQY--HNLRYPQ--GYFPRDNLKMKNDPLD  547 (577)
Q Consensus       483 ~g~~~~~v~~~~~~~~~~~~~~~~~p~~~-iipr~~~i~~~q~--~~~~~~~--~~~~~~~~~~~~~~~~  547 (577)
                      .+.+++.|+.|....          |.|- +=.....|..|.|  -++.||-  ||||+- |.-.+||||
T Consensus        34 p~~vnvvIEIP~gs~----------~~KyE~dk~~g~i~~DR~l~s~~~YP~NYGfIP~T-l~~DgDPLD   92 (196)
T 3gvf_A           34 PQDFNVIIEIPAQSE----------PVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQT-LSGDGDPVD   92 (196)
T ss_dssp             TTBEEEEEEECTTCC----------SEEEEEETTTTEEEEEEECTTCCCCSSEEEECTTC-CCTTSSCCE
T ss_pred             CCEEEEEEEecCCCC----------ceEEEEecCCCCEEEEeEcCCCccCCcccccccCc-cCCCCCceE
Confidence            466778888876321          1122 1123344445543  5789998  999986 888999998


No 47 
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=20.49  E-value=57  Score=30.07  Aligned_cols=53  Identities=19%  Similarity=0.186  Sum_probs=33.0

Q ss_pred             ceeeEEEeecCCCCCccceeEeeceeEE-EEeCceeEeeec--cccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698        484 GHTGFNNVAERTDWTNENTLEDKLGHGT-FVAGIKRILWDQ--YHNLRYPQ--GYFPRDNLKMKNDPLD  547 (577)
Q Consensus       484 g~~~~~v~~~~~~~~~~~~~~~~~p~~~-iipr~~~i~~~q--~~~~~~~~--~~~~~~~~~~~~~~~~  547 (577)
                      +.+++.|+.|....          |.|- +=..+..|..|.  |-++.||-  ||||+- |.-.+||||
T Consensus        13 ~~~nvvIEIP~gs~----------p~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~T-l~~DgDPlD   70 (175)
T 2au7_A           13 EDIYVVIEIPANAD----------PIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHT-LSLDGDPVD   70 (175)
T ss_dssp             TBEEEEEEECTTCC----------SEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTC-CCTTSSCCE
T ss_pred             CEEEEEEEecCCCC----------ceeEEEecCCCCEEEeeecCCCCcCCcCcCccCCc-cCCCCCceE
Confidence            56778888877431          1222 112222333333  57899998  999975 788889998


No 48 
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=20.08  E-value=52  Score=30.96  Aligned_cols=30  Identities=27%  Similarity=0.595  Sum_probs=22.7

Q ss_pred             eeEeeec--cccCCCCC--CCCCCCCCCCCCCCCC
Q psy15698        517 KRILWDQ--YHNLRYPQ--GYFPRDNLKMKNDPLD  547 (577)
Q Consensus       517 ~~i~~~q--~~~~~~~~--~~~~~~~~~~~~~~~~  547 (577)
                      .+|..|.  |-++.||-  ||||+- |.-.+||||
T Consensus        59 G~l~~DR~l~~~~~YP~NYGfIP~T-l~~DGDPLD   92 (199)
T 3ld3_A           59 GALWVDRFLPTAMYYPCNYGFIPNT-IAGDGDPVD   92 (199)
T ss_dssp             CCEEEEEECSSSBCCSSEEEECTTC-CCTTSSCCE
T ss_pred             CCEEEEEEcCCCCcCCccccccccc-ccCCCCceE
Confidence            3444443  35789998  999985 888999998


Done!