RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15698
(577 letters)
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens,
Novo/BPN' [TaxId: 1390]}
Length = 281
Score = 95.4 bits (236), Expect = 2e-22
Identities = 68/223 (30%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 192 KTVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNE-NTLED 250
++VP ++ I +A L G GS VKVAV D+G+ S H + +E N +D
Sbjct: 2 QSVPYGVSQI-KAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVAGGASMVPSETNPFQD 60
Query: 251 KLGHGTFVAGLIASSQRCLGF---APDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMD 307
HGT VAG +A+ +G AP A L+ +V SW ++ +AI MD
Sbjct: 61 NNSHGTHVAGTVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMD 120
Query: 308 VLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPL--YGTLNNPADQMDVIGVGG 365
V+N+S+GGP V + A+ V++++A GN+G T+ P VI VG
Sbjct: 121 VINMSLGGPSGSAA-LKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGA 179
Query: 366 INFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPST 408
++ +Q A FSS G + G A G S
Sbjct: 180 VDSSNQRASFSSVGPELDVMAPGVSIQSTLPGNKYGAYNGTSM 222
Score = 38.0 bits (87), Expect = 0.002
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 466 SIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNE-NTLEDKLGHGTFVAG 515
GS VKVAV D+G+ S H + +E N +D HGT VAG
Sbjct: 20 GYTGSNVKVAVIDSGIDSSHPDLKVAGGASMVPSETNPFQDNNSHGTHVAG 70
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]}
Length = 269
Score = 90.0 bits (222), Expect = 1e-20
Identities = 65/191 (34%), Positives = 93/191 (48%), Gaps = 8/191 (4%)
Query: 192 KTVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDK 251
++VP I+ + QA + G+ GSGVKVAV DTG+S+ H N + E + +D
Sbjct: 2 QSVPWGISRV-QAPAAHNRGLTGSGVKVAVLDTGIST-HPDLNIRGGASFVPGEPSTQDG 59
Query: 252 LGHGTFVAGLIA---SSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDV 308
GHGT VAG IA +S LG AP AEL+ +V S +A M V
Sbjct: 60 NGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHV 119
Query: 309 LNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINF 368
NLS+G P V T+ V++++A GN G G+++ PA + + VG +
Sbjct: 120 ANLSLGSPSPSA-TLEQAVNSATSRGVLVVAASGNSGA--GSISYPARYANAMAVGATDQ 176
Query: 369 EDQIAKFSSRG 379
+ A FS G
Sbjct: 177 NNNRASFSQYG 187
Score = 37.6 bits (86), Expect = 0.002
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 466 SIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGIKRILWDQYH 525
+ GSGVKVAV DTG+S+ H N + E + +D GHGT VAG L +
Sbjct: 20 GLTGSGVKVAVLDTGIST-HPDLNIRGGASFVPGEPSTQDGNGHGTHVAGTIAALNNSIG 78
Query: 526 NLRYP 530
L
Sbjct: 79 VLGVA 83
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg
[TaxId: 1423]}
Length = 274
Score = 89.6 bits (221), Expect = 1e-20
Identities = 56/229 (24%), Positives = 86/229 (37%), Gaps = 19/229 (8%)
Query: 193 TVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDK- 251
TVP I I +A+ + G +G+ VKVAV DTG+ + H N V + E D
Sbjct: 3 TVPYGIPLI-KADKVQAQGFKGANVKVAVLDTGIQASHPDLNVVGGASFVAGEAYNTDGN 61
Query: 252 --LGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVL 309
H + ++ LG AP L+ +V + S + +A MDV+
Sbjct: 62 GHGTHVAGTVAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVI 121
Query: 310 NLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGP--LYGTLNNPADQMDVIGVGGIN 367
N G V A V++++A GN G T+ PA VI VG ++
Sbjct: 122 N-MSLGGASGSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD 180
Query: 368 FEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMW 416
A FSS G + +++ G+ V +
Sbjct: 181 SNSNRASFSSVGA------------ELEVMAPGAGVYSTYPTNTYATLN 217
Score = 41.1 bits (95), Expect = 2e-04
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 467 IRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLED 505
+G+ VKVAV DTG+ + H N V + E D
Sbjct: 21 FKGANVKVAVLDTGIQASHPDLNVVGGASFVAGEAYNTD 59
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp.,
AK.1 [TaxId: 1409]}
Length = 280
Score = 88.5 bits (218), Expect = 4e-20
Identities = 51/188 (27%), Positives = 79/188 (42%), Gaps = 9/188 (4%)
Query: 202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN--VAERTDWTNENTLEDKLGHGTFVA 259
+ WD+ SG ++AV DTG+ H + + N+ D HGT VA
Sbjct: 18 TYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDPMDLNNHGTHVA 77
Query: 260 GLIA----SSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGG 315
G+ A ++ G AP+ + R S DA YA +V+NLS+ G
Sbjct: 78 GIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSL-G 136
Query: 316 PDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKF 375
D + V ++++A GN+G T PA +VI VG ++ D++A F
Sbjct: 137 CDCHTTTLENAVNYAWNKGSVVVAAAGNNGS--STTFEPASYENVIAVGAVDQYDRLASF 194
Query: 376 SSRGMTAW 383
S+ G
Sbjct: 195 SNYGTWVD 202
Score = 38.8 bits (89), Expect = 0.001
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 452 WYPYLPHNGEFLEVSIRGSGVKVAVFDTGLSSGHTGFNN--VAERTDWTNENTLEDKLGH 509
+ P + +V+ SG ++AV DTG+ H + + N+ D H
Sbjct: 13 YGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVIKGYDFVDNDYDPMDLNNH 72
Query: 510 GTFVAGI 516
GT VAGI
Sbjct: 73 GTHVAGI 79
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1
{Pseudoalteromonas sp. AS-11 [TaxId: 247492]}
Length = 435
Score = 88.2 bits (217), Expect = 3e-19
Identities = 55/266 (20%), Positives = 89/266 (33%), Gaps = 26/266 (9%)
Query: 192 KTVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGF--NNVAERTDWTNENTLE 249
+T P T + A L D + + + D+G H NNV + N +
Sbjct: 2 ETTPWGQTFV-GATVLSD--SQAGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQ 58
Query: 250 --DKLGHGTFVAGLIASS---QRCLGFAPDAEL--HIFRVFTNQQVSYTSWFLDAFNYAI 302
+ HGT VAG IA+ + +G P+ HI +VF Y+S + A + +
Sbjct: 59 PGNNNAHGTHVAGTIAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCV 118
Query: 303 LKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIG 362
+ G + + N V+LI+A GN G + + PA V+
Sbjct: 119 NSGGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAGNAGD--SSYSYPASYDSVMS 176
Query: 363 VGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMWPYCTQP 422
V ++ A FS +I G A+ T GE +
Sbjct: 177 VAAVDSNLDHAAFSQYTDQ------------VEISGPGEAILSTVTVGEGRLADITIGGQ 224
Query: 423 LYHGAIPIIVNVTILNGMGVVGKILE 448
Y + N +G +
Sbjct: 225 SYFSNGVVPHNRLTPSGTSYAPAPIN 250
Score = 50.1 bits (118), Expect = 4e-07
Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 466 SIRGSGVKVAVFDTGLSSGHTGF--NNVAERTDWTNENTLE--DKLGHGTFVAGI 516
+ + + D+G H NNV + N + + HGT VAG
Sbjct: 18 DSQAGNRTICIIDSGYDRSHNDLNANNVTGTNNSGTGNWYQPGNNNAHGTHVAGT 72
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris
[TaxId: 2026]}
Length = 279
Score = 69.0 bits (167), Expect = 1e-13
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 10/188 (5%)
Query: 202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGF--NNVAERTDWTNENTLEDKLGHGTFVA 259
+QA WD+ GSG K+A+ DTG+ S H V N++T ++ GHGT A
Sbjct: 18 IQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCA 76
Query: 260 GLIA----SSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLSIGG 315
G+ A +S G AP A + RV N + + YA + V++LS+GG
Sbjct: 77 GIAAAVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGG 136
Query: 316 PDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKF 375
+ N+ ++ A + N PA + I V + D + F
Sbjct: 137 TVGNSGL--QQAVNYAWNKGSVVVAAAGNAG-NTAPNYPAYYSNAIAVASTDQNDNKSSF 193
Query: 376 SSRGMTAW 383
S+ G
Sbjct: 194 STYGSWVD 201
Score = 35.5 bits (80), Expect = 0.014
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 468 RGSGVKVAVFDTGLSSGHTGF--NNVAERTDWTNENTLEDKLGHGTFVAGIKRILWDQYH 525
GSG K+A+ DTG+ S H V N++T ++ GHGT A I +
Sbjct: 28 EGSGAKIAIVDTGVQSNHPDLAGKVVGGWDFVDNDSTPQNGNGHGTHCA---GIAAAVTN 84
Query: 526 NLRYPQGYFPRDNL 539
N G P+ ++
Sbjct: 85 NSTGIAGTAPKASI 98
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43,
N-terminal domain {Bacillus sp. KSM-KP43 [TaxId:
109322]}
Length = 318
Score = 66.4 bits (160), Expect = 1e-12
Identities = 50/238 (21%), Positives = 82/238 (34%), Gaps = 18/238 (7%)
Query: 200 SILQANTLW-DLGIRGSGVKVAVFDTGLSSGHTGF-------NNVAERTDWTNENTLEDK 251
I++A+ G+ G G VAV DTGL +G + N D
Sbjct: 6 GIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDT 65
Query: 252 LGHGTFVAGLIASSQ-RCLGFAPDAELHIFRVFTNQQVSYTSWF--LDAFNYAILKKMDV 308
GHGT VAG + + G AP A L + + F+ A +
Sbjct: 66 NGHGTHVAGSVLGNGSTNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARI 125
Query: 309 LNLSIGGPDFMDFPFVDKVWELTA--NRVILISAIGNDGPLYGTLNNPADQMDVIGVGGI 366
S G + + + N + ++ A GN+GP GT++ P + I VG
Sbjct: 126 HTNSWGAAVNGAYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGAT 185
Query: 367 NFEDQIAKFSSRGMTAW-----ELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMWPYC 419
+ + P GR+KPD++ G+ + ++ +
Sbjct: 186 ENLRPSFGSYADNINHVAQFSSRGPTKDGRIKPDVMAPGTFILSARSSLAPDSSFWAN 243
Score = 53.0 bits (125), Expect = 4e-08
Identities = 19/95 (20%), Positives = 26/95 (27%), Gaps = 7/95 (7%)
Query: 467 IRGSGVKVAVFDTGLSSGHTGF-------NNVAERTDWTNENTLEDKLGHGTFVAGIKRI 519
+ G G VAV DTGL +G + N D GHGT VAG
Sbjct: 19 LYGQGQIVAVADTGLDTGRNDSSMHEAFRGKITALYALGRTNNANDTNGHGTHVAGSVLG 78
Query: 520 LWDQYHNLRYPQGYFPRDNLKMKNDPLDWNGDHVH 554
+ + + +
Sbjct: 79 NGSTNKGMAPQANLVFQSIMDSGGGLGGLPSNLQT 113
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans
[TaxId: 93466]}
Length = 671
Score = 67.8 bits (164), Expect = 2e-12
Identities = 50/365 (13%), Positives = 103/365 (28%), Gaps = 66/365 (18%)
Query: 55 EFIVTFRGYYKSAARSRYIAAALNNSDSVLRWEILQRKNPATDFPSDFDVVLLEEVTAAL 114
+ +V + + ++ + +++ + + +++ +
Sbjct: 33 KILVGYND-----------RSEVDKIVKAVNGKVVLELPQIKVVSIKLNGMTVKQAYDKI 81
Query: 115 SSLLEHPLIKRVTPQRLVHRSLQFIPEQRHGSEGVKDEDGSEGVEKEADVRPLRRTSLGV 174
L I+ V P VK + K R +
Sbjct: 82 K-ALALKGIRYVEPSYKREL---------IKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131
Query: 175 QSQFWQATGRLTSRRLLKTVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFN 234
++ W + +I LW+ G+ + VAV DTG+ H
Sbjct: 132 SNELWG-----------------LEAIGVTQQLWE-EASGTNIIVAVVDTGVDGTHPDLE 173
Query: 235 -------NVAERTDWTNENTLEDKLGHGTFVAGLIASSQRC---LGFAPDAELHIFRVFT 284
A + GT VAG IA+ + +G AP A++ +F
Sbjct: 174 GQVIAGYRPAFDEELPAGTDSSYGGSAGTHVAGTIAAKKDGKGIVGVAPGAKIMPIVIFD 233
Query: 285 NQQVS------YTSWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVILI 338
+ + + +A V+N S GG + + + V+++
Sbjct: 234 DPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWGYSYTMKEAFDYAMEHGVVMVV 293
Query: 339 SAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVT 398
SA N PA VI V +++ + + + +
Sbjct: 294 SAGNNTS--DSHHQYPAGYPGVIQVAALDYYGGTFRVAGFSSRSD---------GVSVGA 342
Query: 399 YGSAV 403
G +
Sbjct: 343 PGVTI 347
Score = 40.0 bits (92), Expect = 8e-04
Identities = 14/56 (25%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
Query: 468 RGSGVKVAVFDTGLSSGHTGFN-------NVAERTDWTNENTLEDKLGHGTFVAGI 516
G+ + VAV DTG+ H A + GT VAG
Sbjct: 152 SGTNIIVAVVDTGVDGTHPDLEGQVIAGYRPAFDEELPAGTDSSYGGSAGTHVAGT 207
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium
album), strain limber [TaxId: 37998]}
Length = 279
Score = 59.0 bits (141), Expect = 3e-10
Identities = 45/214 (21%), Positives = 77/214 (35%), Gaps = 10/214 (4%)
Query: 199 TSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFV 258
TS + +D G G V V DTG+ + H F A+ ++ + GHGT
Sbjct: 16 TSPGTSTYYYDES-AGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGN-GHGTHC 73
Query: 259 AGLIASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAILKKMD-----VLNLSI 313
AG + R G A +L +V + S + ++ K + + S+
Sbjct: 74 AGTVG--SRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASL 131
Query: 314 GGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQIA 373
L ++ V++ A GN+ +PA + V VG + D+ +
Sbjct: 132 SLGGGYSSSVNSAAARLQSSGVMVAVAAGNNNA-DARNYSPASEPSVCTVGASDRYDRRS 190
Query: 374 KFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPS 407
FS+ G G + I ++ G S
Sbjct: 191 SFSNYGSVLDIFGPGTDILSTWIGGSTRSISGTS 224
Score = 44.7 bits (104), Expect = 1e-05
Identities = 21/121 (17%), Positives = 32/121 (26%), Gaps = 1/121 (0%)
Query: 457 PHNGEFLEVSIRGSGVKVAVFDTGLSSGHTGFNNVAERTDWTNENTLEDKLGHGTFVAGI 516
P + G G V V DTG+ + H F A+ ++ + GHGT AG
Sbjct: 18 PGTSTYYYDESAGQGSCVYVIDTGIEASHPEFEGRAQMVKTYYYSSRDGN-GHGTHCAGT 76
Query: 517 KRILWDQYHNLRYPQGYFPRDNLKMKNDPLDWNGDHVHTNFKYEQRKAPSDWFKDFCSSQ 576
G D+ G + K +
Sbjct: 77 VGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG 136
Query: 577 F 577
+
Sbjct: 137 Y 137
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus
novosp. MN-32, kumamolisin [TaxId: 198803]}
Length = 357
Score = 56.3 bits (134), Expect = 4e-09
Identities = 35/239 (14%), Positives = 65/239 (27%), Gaps = 25/239 (10%)
Query: 203 QANTLWDL--GIRGSGVKVAVFDTGLSSGHTGF-NNVAERTDWTNENTLEDKLGHGTFVA 259
+ G+ G G +A+ G T A + G
Sbjct: 10 DVAQAYQFPEGLDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPT 69
Query: 260 GLIASS--------QRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI---LKKMDV 308
G + AP A++ ++ + FL+A A+ K +
Sbjct: 70 GDPNGPDGEVELDIEVAGALAPGAKIAVYFAPN-----TDAGFLNAITTAVHDPTHKPSI 124
Query: 309 LNLSIGGPDFMDF-----PFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGV 363
+++S GGP+ + A V +++A G+ G G +
Sbjct: 125 VSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAAS 184
Query: 364 GGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMWPYCTQP 422
+ +S G E G G + P + + + P P
Sbjct: 185 PYVLACGGTRLVASAGRIERETVWNDGPD-GGSTGGGVSRIFPLPSWQERANVPPSANP 242
Score = 41.6 bits (96), Expect = 2e-04
Identities = 8/51 (15%), Positives = 12/51 (23%), Gaps = 1/51 (1%)
Query: 467 IRGSGVKVAVFDTGLSSGHTGF-NNVAERTDWTNENTLEDKLGHGTFVAGI 516
+ G G +A+ G T A + G G
Sbjct: 21 LDGQGQCIAIIALGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGD 71
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas
sp., sedolisin [TaxId: 306]}
Length = 369
Score = 55.4 bits (132), Expect = 8e-09
Identities = 36/268 (13%), Positives = 67/268 (25%), Gaps = 23/268 (8%)
Query: 195 PRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTG------FNNVAERTDWTNENTL 248
P + +I A++ + V + G S N + T
Sbjct: 9 PTEFPTIYDASSAPT----AANTTVGIITIGGVSQTLQDLQQFTSANGLASVNTQTIQTG 64
Query: 249 EDKLGHGTFVAGLIASS---QRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI-LK 304
+ G Q +G A A + +Q S + AFN A+
Sbjct: 65 SSNGDYSDDQQGQGEWDLDSQSIVGSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDN 124
Query: 305 KMDVLNLSI------GGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQM 358
V+N+S+ D A + G++G D
Sbjct: 125 VAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGYPDGS 184
Query: 359 DVIGVGGINFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVR---GPSTNGECQYM 415
+ + IA + T V + + + G + E +
Sbjct: 185 TYSVSWPASSPNVIAVGGTTLYTTSAGAYSNETVWNEGLDSNGKLWATGGGYSVYESKPS 244
Query: 416 WPYCTQPLYHGAIPIIVNVTILNGMGVV 443
W + ++ G G +
Sbjct: 245 WQSVVSGTPGRRLLPDISFDAAQGTGAL 272
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 339
Score = 54.0 bits (128), Expect = 2e-08
Identities = 31/235 (13%), Positives = 55/235 (23%), Gaps = 14/235 (5%)
Query: 202 LQANTLWDLGIRGSGVKVAVFDTGLSSGHTGFNN--------VAERTDWTNENTLEDKLG 253
+ LW I G+GV A+ D GL + + + L D
Sbjct: 33 INVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFCAEGSWDFNDNTNLPKPRLSDDYH 92
Query: 254 HGTFVAGLIASSQRCLGFAPDA-ELHIFRVFTNQQVSYTSWFLDAFNYAILKKMDVLNLS 312
+ A I + T + Y + D+ + S
Sbjct: 93 GTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIYGL-DVNDIYSCS 151
Query: 313 IGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGINFEDQI 372
G D D + +L ++ G D G + A N++
Sbjct: 152 WGPAD--DGRHLQGPSDLVKKALVKGVTEGRDSK--GAIYVFASGNGGTRGDNCNYDGYT 207
Query: 373 AKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMWPYCTQPLYHGA 427
S + A + + + + HG
Sbjct: 208 NSIYSITIGAIDHKDLHPPYSEGCSAVMAVTYSSGSGEYIHSSDINGRCSNSHGG 262
Score = 32.8 bits (73), Expect = 0.092
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 464 EVSIRGSGVKVAVFDTGLSSGHTGFNN 490
+I G+GV A+ D GL + +
Sbjct: 40 YNNITGAGVVAAIVDDGLDYENEDLKD 66
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 334
Score = 52.5 bits (124), Expect = 5e-08
Identities = 30/206 (14%), Positives = 59/206 (28%), Gaps = 24/206 (11%)
Query: 202 LQANTLWDLGIRGSGVKVAVFDTGLSSGH----------TGFNNVAERTDWTNENTLEDK 251
L W G G G+ V++ D G+ H F+ + D T +
Sbjct: 24 LNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMND 83
Query: 252 LGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNYAI-LKKMDVLN 310
HGT AG +A+ + + ++A + + + + +
Sbjct: 84 NRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYS 143
Query: 311 LSIGGPD-----------FMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNP--ADQ 357
S G D + F I + A GN G + + N +
Sbjct: 144 ASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNS 203
Query: 358 MDVIGVGGINFEDQIAKFSSRGMTAW 383
+ + + + +S +
Sbjct: 204 IYTLSISSATQFGNVPWYSEACSSTL 229
Score = 36.3 bits (82), Expect = 0.009
Identities = 10/99 (10%), Positives = 19/99 (19%), Gaps = 1/99 (1%)
Query: 464 EVSIRGSGVKVAVFDTGLSSGHTGF-NNVAERTDWTNENTLEDKLGHGTFVAGIKRILWD 522
G G+ V++ D G+ H N + + D T + +
Sbjct: 31 AQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRC 90
Query: 523 QYHNLRYPQGYFPRDNLKMKNDPLDWNGDHVHTNFKYEQ 561
+ E
Sbjct: 91 AGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEA 129
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId:
1421]}
Length = 309
Score = 49.9 bits (117), Expect = 4e-07
Identities = 50/249 (20%), Positives = 78/249 (31%), Gaps = 21/249 (8%)
Query: 189 RLLKTVPRQITSILQANTLWDLGIRGSGVKVAVFDTGLSSGHTGF-NNVAERTDWTNENT 247
R + +P I +I N GSG+ +AV DTG+++ H NNV + D+T T
Sbjct: 1 RASQQIPWGIKAI-YNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATT 59
Query: 248 LED-------KLGHGTFVAGLIASSQRCLGFAPDAELHIFRVFTNQQVSYTSWFLDAFNY 300
+ G L G A + S + + D
Sbjct: 60 PINNSCTDRNGHGTHVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAA 119
Query: 301 AILKKMDVLNLSI-------GGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNN 353
G + V + V++++A GN G GT+
Sbjct: 120 IRHAADQATATGTKTIISMSLGSSANNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGY 179
Query: 354 PADQMDVIGVGGINFEDQI-----AKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPST 408
P + I V + Q A +SSRG + +I GS+V
Sbjct: 180 PGALPNAIAVAALENVQQNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWY 239
Query: 409 NGECQYMWP 417
NG +
Sbjct: 240 NGGYNTISG 248
Score = 37.9 bits (86), Expect = 0.002
Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 452 WYPYLPHNGEFLEVSIRGSGVKVAVFDTGLSSGHTGF-NNVAERTDWTN-----ENTLED 505
W +N + L + GSG+ +AV DTG+++ H NNV + D+T N+ D
Sbjct: 8 WGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVEQCKDFTGATTPINNSCTD 67
Query: 506 KLGHGTFVAGIKRILWDQYHNLRYPQGYFPRDNLKMKNDPLDWNGDHVHTNFKYEQRKAP 565
+ GHGT VAG Y L +G + R A
Sbjct: 68 RNGHGTHVAGTALADGGSDQAGIYGVAPDADL---WAYKVLLDSGSGYSDDIAAAIRHAA 124
Query: 566 SDWFKDFC 573
Sbjct: 125 DQATATGT 132
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 29.5 bits (65), Expect = 1.1
Identities = 26/159 (16%), Positives = 45/159 (28%), Gaps = 18/159 (11%)
Query: 307 DVLNLSIGGPDFMDFPFVDKVWELTANRVILISAIGNDGPLYGTLNNPADQMDVIGVGGI 366
V+ L+IG P DF + + E AI YG + I V
Sbjct: 31 KVIRLNIGDPVKFDFQPPEHMKE------AYCKAIKEGHNYYGDSEGLPELRKAI-VERE 83
Query: 367 NFEDQIAKFSSRGMTAWELPGGYGRVKPDIVTYGSAVRGPSTNGECQYMWPYCTQPLYHG 426
++ + + + ++ G + P PY ++G
Sbjct: 84 KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPG-----PSYPPYTGLVKFYG 138
Query: 427 AIPIIVNVTILNGMGVVG-----KILERPKWYPYL-PHN 459
P+ KI +R K + P+N
Sbjct: 139 GKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 177
>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga
maritima [TaxId: 2336]}
Length = 420
Score = 29.4 bits (64), Expect = 1.3
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 292 SWFLDAFNYAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVI 336
S + +A D ++ G PD FP K A +I
Sbjct: 26 SIIREILKFA--ADKDAISFGGGVPDPETFPR--KELAEIAKEII 66
>d1mkna_ g.5.1.1 (A:) Midkine, a heparin-binding growth factor,
N-terminal domain {Synthetic}
Length = 59
Score = 26.8 bits (59), Expect = 1.3
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 7/36 (19%)
Query: 28 CIRQIKDNGE-------KERLSRVKCKQKCNLHKEF 56
C KD G + R++C+ CN KEF
Sbjct: 23 CTPSSKDCGVGFREGTCGAQTQRIRCRVPCNWKKEF 58
>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase,
MSAT {Thermococcus profundus [TaxId: 49899]}
Length = 403
Score = 28.9 bits (63), Expect = 2.0
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 300 YAILKKMDVLNLSIGGPDFMDFPFVDKVWELTANRVI 336
+++ DV++L+ G P FP + + A V+
Sbjct: 23 LKLVETSDVISLAGGLPAPETFPV--ETIKKIAVEVL 57
>d3bz6a2 a.4.5.75 (A:97-180) Hypothetical protein PSPTO2686
{Pseudomonas syringae pv. tomato [TaxId: 323]}
Length = 84
Score = 26.6 bits (59), Expect = 2.5
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 12/53 (22%)
Query: 87 EILQRKNPATDFPSDFDVVLLEEVTAALSSLLEHPLIKRVTPQ------RLVH 133
E+L R N DF E+V L L+ L V Q R +H
Sbjct: 28 ELLTRSNRMHDFED------SEQVVHQLERLIARGLATLVPRQSGQREDRYMH 74
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 28.2 bits (61), Expect = 3.1
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 301 AILKKMDVLNLSIGGPDFMDFPFV 324
+ +++ +NL G P PF+
Sbjct: 20 GLAQRLGAVNLGQGFPSNPPPPFL 43
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and
second domains {Escherichia coli [TaxId: 562]}
Length = 355
Score = 27.9 bits (62), Expect = 3.4
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 10/49 (20%)
Query: 504 EDKLGHGTFVAGIK--RILWDQYHNLRYPQGYFPRDNLKMKNDPLDWNG 550
E+ LG+ AG + R DQY N + + N DWNG
Sbjct: 287 EESLGYNAIAAGFQGQRHWTDQYPNGDTAEA--------ILNSSFDWNG 327
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 27.8 bits (60), Expect = 3.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 301 AILKKMDVLNLSIGGPDF 318
A+ ++ +NLS G PDF
Sbjct: 21 ALAQQHQAINLSQGFPDF 38
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I
{Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Length = 418
Score = 27.8 bits (60), Expect = 4.4
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 301 AILKKMDVLNLSIGGPDF 318
+ + LNL G PD+
Sbjct: 21 QLAAQYKPLNLGQGFPDY 38
>d1e0ba_ b.34.13.2 (A:) Heterochromatin protein 1, HP1 {Fission
yeast (Schizosaccharomyces pombe), SWI6 [TaxId: 4896]}
Length = 61
Score = 25.2 bits (55), Expect = 4.5
Identities = 11/50 (22%), Positives = 14/50 (28%), Gaps = 13/50 (26%)
Query: 17 ENSDSYVQDVECIRQIKD-------------NGEKERLSRVKCKQKCNLH 53
EN DS+ V I I+ NG +KC
Sbjct: 3 ENYDSWEDLVSSIDTIERKDDGTLEIYLTWKNGAISHHPSTITNKKCPQK 52
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 27.1 bits (59), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 292 SWFLDAFNYAILKKMDVLNLSIGGPDF 318
S F+ A K DV++L IG PDF
Sbjct: 12 SEIRKLFDIAAGMK-DVISLGIGEPDF 37
>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga
maritima [TaxId: 2336]}
Length = 389
Score = 27.1 bits (58), Expect = 7.3
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 292 SWFLDAFNYA-ILKKM--DVLNLSIGGPDF 318
S +A + KK + +L+IG PD
Sbjct: 11 SPIRKLVPFAEMAKKRGVRIHHLNIGQPDL 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.136 0.423
Gapped
Lambda K H
0.267 0.0690 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,270,112
Number of extensions: 110434
Number of successful extensions: 299
Number of sequences better than 10.0: 1
Number of HSP's gapped: 286
Number of HSP's successfully gapped: 43
Length of query: 577
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 487
Effective length of database: 1,171,896
Effective search space: 570713352
Effective search space used: 570713352
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.0 bits)