Query psy157
Match_columns 347
No_of_seqs 131 out of 221
Neff 5.3
Searched_HMMs 29240
Date Fri Aug 16 19:14:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1us7_B HSP90 CO-chaperone CDC3 100.0 1E-70 3.6E-75 518.7 13.4 218 124-346 13-254 (265)
2 2kwv_A RAD30 homolog B, DNA po 90.1 0.18 6.2E-06 35.6 2.6 23 264-287 13-35 (48)
3 2khu_A Immunoglobulin G-bindin 66.9 2.1 7.2E-05 34.7 1.5 23 262-285 62-85 (108)
4 2pjx_C Syntaxin-4; membrane tr 47.9 4.7 0.00016 25.0 0.4 9 11-19 13-21 (29)
5 1kd8_B GABH BLL, GCN4 acid bas 47.3 44 0.0015 22.1 5.0 33 38-70 1-33 (36)
6 3hnw_A Uncharacterized protein 38.6 1.7E+02 0.0059 24.4 9.1 21 84-104 110-130 (138)
7 3hnw_A Uncharacterized protein 38.3 1.7E+02 0.006 24.4 9.4 27 44-70 81-107 (138)
8 2lw1_A ABC transporter ATP-bin 38.3 1.3E+02 0.0045 22.9 8.6 26 46-71 23-48 (89)
9 4fxe_A Antitoxin RELB; toxin/a 36.7 27 0.00094 26.7 3.3 22 196-217 18-39 (79)
10 1c1g_A Tropomyosin; contractIl 36.1 1.8E+02 0.006 24.5 8.9 7 49-55 10-16 (284)
11 2l5g_B Putative uncharacterize 35.4 54 0.0018 22.5 4.1 28 44-71 8-35 (42)
12 3ai4_A Yeast enhanced green fl 34.3 14 0.00048 35.0 1.5 22 264-286 248-269 (283)
13 2v66_B Nuclear distribution pr 32.9 2E+02 0.0068 23.4 9.8 61 38-105 3-63 (111)
14 1hjb_A Ccaat/enhancer binding 31.9 1.7E+02 0.0058 22.8 7.2 11 22-32 8-18 (87)
15 1kd8_A GABH AIV, GCN4 acid bas 31.6 85 0.0029 20.7 4.5 32 38-69 1-32 (36)
16 2dq0_A Seryl-tRNA synthetase; 29.4 2.6E+02 0.009 27.6 10.0 17 188-204 197-213 (455)
17 1ko6_B Nuclear pore complex pr 29.1 15 0.00051 27.5 0.6 17 10-26 5-21 (64)
18 2qk1_A Protein STU2; STU2P, XM 28.7 26 0.00091 31.3 2.3 32 266-297 7-38 (249)
19 3qne_A Seryl-tRNA synthetase, 28.5 2.7E+02 0.0092 28.1 9.9 14 190-203 191-204 (485)
20 3c3f_A Alpha/beta peptide with 27.6 1.1E+02 0.0038 20.0 4.4 18 38-55 1-18 (34)
21 1lg4_A Doppel protein, prion-l 26.9 59 0.002 26.8 3.8 40 162-202 78-120 (129)
22 2yy0_A C-MYC-binding protein; 26.4 90 0.0031 22.1 4.3 28 78-105 20-47 (53)
23 2r2v_A GCN4 leucine zipper; co 25.1 1.5E+02 0.005 19.4 4.7 31 38-68 1-31 (34)
24 4fz4_A 0197-18KD, uncharacteri 25.1 3.3E+02 0.011 23.4 12.8 20 86-105 6-25 (154)
25 2bni_A General control protein 24.7 99 0.0034 20.2 3.8 18 38-55 1-18 (34)
26 2wq1_A General control protein 23.8 1.3E+02 0.0044 19.5 4.2 30 39-68 1-30 (33)
27 1gu4_A CAAT/enhancer binding p 22.9 2.5E+02 0.0086 21.3 7.2 22 33-54 31-52 (78)
28 2q73_A MAZG, hypothetical prot 22.8 35 0.0012 26.6 1.8 22 188-209 60-81 (100)
29 3ygs_P Procaspase 9; apoptosis 22.6 99 0.0034 23.9 4.4 55 180-234 26-81 (97)
30 2oxj_A Hybrid alpha/beta pepti 22.4 1.4E+02 0.005 19.4 4.2 28 38-65 1-28 (34)
31 2yvy_A MGTE, Mg2+ transporter 22.1 70 0.0024 28.7 3.9 27 287-313 79-105 (278)
32 3uux_B Mitochondrial division 22.1 4.7E+02 0.016 24.1 10.2 93 12-105 128-226 (242)
33 1vz0_A PARB, chromosome partit 21.8 67 0.0023 28.8 3.7 46 274-319 158-204 (230)
34 2ve7_C Kinetochore protein NUF 21.3 55 0.0019 30.1 3.0 50 79-130 171-220 (250)
35 1x5b_A Signal transducing adap 20.3 1.5E+02 0.0053 25.1 5.5 15 308-322 140-154 (163)
No 1
>1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, H shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A
Probab=100.00 E-value=1e-70 Score=518.69 Aligned_cols=218 Identities=55% Similarity=0.993 Sum_probs=165.1
Q ss_pred cccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH------------------------HhHHHHHHHHHhhhcchh
Q psy157 124 KTVVNKKPPLQQGEKSDEEKEQEMKAFVKENEKLIKQY------------------------ANYLVIWCINLAMDEKFD 179 (347)
Q Consensus 124 kS~INk~~~~~~~~~see~~~~~~~~F~~k~e~~~~~F------------------------~d~Ll~~af~lemegk~~ 179 (347)
.|+||.+++++++. |++++...+.+|+++|++++++| +||||||||++||+|+++
T Consensus 13 ~~~~~~~~~~~~~~-~eee~~~~~~~Fv~k~e~~lk~Fa~i~~y~dS~~FL~~hp~Lv~E~tad~Lli~afdlemegk~~ 91 (265)
T 1us7_B 13 ASMVNTKPEKTEED-SEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEETANYLVIWCIDLEVEEKCA 91 (265)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHCCSHHHHHHHHHTTGGGCSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHhcCCCcccccC-ChHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHhCCeecchhhhhHHHHHHHHHHHcCCHH
Confidence 36788766543333 66788899999999999999999 999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHhCCCCCcchhHHhHhhhcccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy157 180 LMDHVAHQCICMQYLLELSKSLNIDPRACIGSFFSKIQIAEPDYKASFDDELKSFKERIRNRAKEKLDEALKEVEEEERQ 259 (347)
Q Consensus 180 ~~~qvaHQalllQyIleLa~~l~~dpr~~v~~FF~ki~~~~~~~~~~F~~dv~~~~~rIk~Ra~~~~~e~~~e~e~ee~q 259 (347)
+|+|||||+||||||+|||++||++||+||++||+||++++|+|+++|++||++||+||++||+++++++++++++++.|
T Consensus 92 ~m~qvaHQ~llLQYIlELak~L~~dpr~~v~~FF~ki~~~~~~~~~~F~ddV~~~~~RIk~Ra~~~~~e~~~e~ee~eeQ 171 (265)
T 1us7_B 92 LMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERK 171 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCGGGTHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998877666678
Q ss_pred hhcCCCCcccccccccCcHHHHHHhhhCChHHHHHHHhcCCHHHHHHHHHHhhhcCccccCccccCCCCCCCCCCCCCCC
Q psy157 260 KRLGPGGLDPVEVFESLPDVLKKCFELQDTAMLQEAIASLSPEEATYHMKRCVDSGLWVPDAKKAAGESEDPQENTPDAE 339 (347)
Q Consensus 260 ~~l~Pggldp~evFeslP~~mq~afet~dld~vn~vl~~M~veeAE~~~~r~~dsGlw~p~~~~~~~~~~~~~~~~~~~~ 339 (347)
.+|||||+||++||+|||++||+||+|||||+||+||++|||++|+|||+||++||||||++++.+++++++. | ++
T Consensus 172 ~rL~pgglDP~EVFeslP~emQ~afes~dld~lnkvl~~M~veeAe~h~~r~idsGLWvp~~~~~~~~~~~~~---~-~~ 247 (265)
T 1us7_B 172 KRLGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEA---G-PG 247 (265)
T ss_dssp TTCCTTSCCHHHHHHHSCTTCCCC-------CHHHHHTCCSSSHHHHHHHHHHHHTSSCCTTC-----------------
T ss_pred hccCCCCCCHHHHHhhCCHHHHHHHHcCCHHHHHHHHHhCCHHHHHHHHHHHHHcCcccCCCCcccccccccC---C-CC
Confidence 9999999999999999999999999999999999999999999999999999999999999987543332222 2 27
Q ss_pred CCCCccC
Q psy157 340 DPTYSAV 346 (347)
Q Consensus 340 ~~~~~~~ 346 (347)
+|.|+.|
T Consensus 248 ~~~~~~~ 254 (265)
T 1us7_B 248 DPLLEAV 254 (265)
T ss_dssp -------
T ss_pred cchhhcC
Confidence 7888876
No 2
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=90.09 E-value=0.18 Score=35.56 Aligned_cols=23 Identities=35% Similarity=0.596 Sum_probs=20.1
Q ss_pred CCCcccccccccCcHHHHHHhhhC
Q psy157 264 PGGLDPVEVFESLPDVLKKCFELQ 287 (347)
Q Consensus 264 Pggldp~evFeslP~~mq~afet~ 287 (347)
|.|.|+ |||..||.+.|.-+-++
T Consensus 13 P~~VD~-eVF~~LP~dIQ~Ells~ 35 (48)
T 2kwv_A 13 PEGVDQ-EVFKQLPADIQEEILSG 35 (48)
T ss_dssp CTTCCG-GGTTTSCHHHHHHHTTC
T ss_pred CCCCCH-HHHHHCcHHHHHHHHhc
Confidence 788998 99999999999877665
No 3
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=66.88 E-value=2.1 Score=34.73 Aligned_cols=23 Identities=35% Similarity=0.748 Sum_probs=20.0
Q ss_pred cC-CCCcccccccccCcHHHHHHhh
Q psy157 262 LG-PGGLDPVEVFESLPDVLKKCFE 285 (347)
Q Consensus 262 l~-Pggldp~evFeslP~~mq~afe 285 (347)
++ |.++|| +||..||+++|+-|-
T Consensus 62 i~~Ps~VDP-~VFyeLP~eVQ~ELl 85 (108)
T 2khu_A 62 ITFPSDIDP-QVFYELPEAVQKELL 85 (108)
T ss_dssp CCCCTTCCH-HHHTTSCHHHHHHHH
T ss_pred CCCCCCCCH-HHHHHccHHHHHHHH
Confidence 44 999999 999999999998764
No 4
>2pjx_C Syntaxin-4; membrane trafficking, SM protein, snare proteins, endocytosis/exocytosis complex; 3.15A {Mus musculus}
Probab=47.87 E-value=4.7 Score=24.97 Aligned_cols=9 Identities=78% Similarity=1.051 Sum_probs=7.4
Q ss_pred ccCCCCCCC
Q psy157 11 EISDDEDET 19 (347)
Q Consensus 11 ElSDDeDe~ 19 (347)
-||||+|||
T Consensus 13 nisddedev 21 (29)
T 2pjx_C 13 NISDDEDEV 21 (29)
T ss_pred CCCCcccee
Confidence 379999986
No 5
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=47.25 E-value=44 Score=22.12 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=18.8
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Q psy157 38 ERMEEQRLENEKFQQEKEKTLKTLEETKKKLVE 70 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l~~ 70 (347)
+||.+++-.-++|..+.......+.+++.+|.+
T Consensus 1 eRMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 1 XKVKQLKAKVEELKSKLWHLKNKVARLKKKNAE 33 (36)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 577777666666665555555555555555543
No 6
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=38.61 E-value=1.7e+02 Score=24.39 Aligned_cols=21 Identities=29% Similarity=0.377 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q psy157 84 KALAELEKEAANIRKKEEDLK 104 (347)
Q Consensus 84 ~h~~kl~~~~~e~~~Kl~eLe 104 (347)
+.+.+|+..-.++..+...|+
T Consensus 110 ~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 110 KEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333344443344444444443
No 7
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=38.34 E-value=1.7e+02 Score=24.37 Aligned_cols=27 Identities=19% Similarity=0.067 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhh
Q psy157 44 RLENEKFQQEKEKTLKTLEETKKKLVE 70 (347)
Q Consensus 44 ~~e~e~l~~~~~~~~~~l~e~~~~l~~ 70 (347)
.++++.+..+.-..+..+..++-++.+
T Consensus 81 ~~~l~~~~kE~~~lK~el~~~~~k~e~ 107 (138)
T 3hnw_A 81 SLDIENKDKEIYDLKHELIAAQIKAES 107 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444443
No 8
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=38.33 E-value=1.3e+02 Score=22.92 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhh
Q psy157 46 ENEKFQQEKEKTLKTLEETKKKLVES 71 (347)
Q Consensus 46 e~e~l~~~~~~~~~~l~e~~~~l~~~ 71 (347)
+.+.|...+.....+++.|...|+.-
T Consensus 23 Ele~le~~Ie~LE~~i~~le~~ladp 48 (89)
T 2lw1_A 23 ELEQLPQLLEDLEAKLEALQTQVADA 48 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 44677777777778888888888753
No 9
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=36.69 E-value=27 Score=26.69 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=19.5
Q ss_pred HHHHhCCCCCcchhHHhHhhhc
Q psy157 196 ELSKSLNIDPRACIGSFFSKIQ 217 (347)
Q Consensus 196 eLa~~l~~dpr~~v~~FF~ki~ 217 (347)
++|..+|.++..+|++|++++-
T Consensus 18 ~v~~~lGl~~s~Ai~~fl~~v~ 39 (79)
T 4fxe_A 18 AALEKMGVTPSEALRLMLEYIA 39 (79)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHH
Confidence 4688999999999999999963
No 10
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=36.11 E-value=1.8e+02 Score=24.53 Aligned_cols=7 Identities=29% Similarity=0.477 Sum_probs=2.5
Q ss_pred HHHHHHH
Q psy157 49 KFQQEKE 55 (347)
Q Consensus 49 ~l~~~~~ 55 (347)
.|+.+..
T Consensus 10 ~l~~~~~ 16 (284)
T 1c1g_A 10 MLKLDKE 16 (284)
T ss_dssp HHHHHHH
T ss_pred HHHHhHH
Confidence 3333333
No 11
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=35.43 E-value=54 Score=22.48 Aligned_cols=28 Identities=14% Similarity=0.125 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhh
Q psy157 44 RLENEKFQQEKEKTLKTLEETKKKLVES 71 (347)
Q Consensus 44 ~~e~e~l~~~~~~~~~~l~e~~~~l~~~ 71 (347)
-|.+..+.+++.....+|.++++++.+|
T Consensus 8 ~qkI~kVdrEI~Kte~kI~~lqkKlkeL 35 (42)
T 2l5g_B 8 IQNMDRVDREITMVEQQISKLKKKQQQL 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666666666666666666554
No 12
>3ai4_A Yeast enhanced green fluorescent protein, DNA POL IOTA; UBM, ubiquitin-binding motif, GFP, fusion, fluorescent prote replication; HET: CR2; 1.60A {Aequorea victoria} PDB: 2kwu_A* 2ktf_B* 2l0g_A*
Probab=34.26 E-value=14 Score=34.96 Aligned_cols=22 Identities=36% Similarity=0.690 Sum_probs=19.4
Q ss_pred CCCcccccccccCcHHHHHHhhh
Q psy157 264 PGGLDPVEVFESLPDVLKKCFEL 286 (347)
Q Consensus 264 Pggldp~evFeslP~~mq~afet 286 (347)
|.+.|| +||..||+++|+-|-+
T Consensus 248 p~~vd~-~vf~~lp~~vq~el~~ 269 (283)
T 3ai4_A 248 PPDIDP-QVFYELPEEVQKELMA 269 (283)
T ss_dssp CTTSCH-HHHTTSCHHHHHHTTG
T ss_pred CCCCCH-HHHHhCCHHHHHHHHH
Confidence 889998 9999999999987654
No 13
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=32.94 E-value=2e+02 Score=23.43 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=34.5
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy157 38 ERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGANNLDELKKALAELEKEAANIRKKEEDLKK 105 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l~~~~~~~~e~~~~l~~h~~kl~~~~~e~~~Kl~eLek 105 (347)
.|...++.....|..++..++.++......... ....|+.++..|......+..++.+|+.
T Consensus 3 k~~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~-------~~~~Lq~El~~lr~~~~~l~~~iReLEq 63 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEVEALKEKLEHQYAQSYK-------QVSVLEDDLSQTRAIKEQLHKYVRELEQ 63 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666777776666666555543322 2445566666666655555555555554
No 14
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=31.85 E-value=1.7e+02 Score=22.76 Aligned_cols=11 Identities=18% Similarity=-0.182 Sum_probs=4.2
Q ss_pred CCCchhhhhHh
Q psy157 22 NIDTPSLFRWR 32 (347)
Q Consensus 22 NVDk~S~~Rwk 32 (347)
++|+.|=--|.
T Consensus 8 ~~dk~d~~Y~~ 18 (87)
T 1hjb_A 8 TVDKHSDEYKI 18 (87)
T ss_dssp --CTTSHHHHH
T ss_pred CcCcccHHHHH
Confidence 45555444443
No 15
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=31.59 E-value=85 Score=20.75 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=16.3
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q psy157 38 ERMEEQRLENEKFQQEKEKTLKTLEETKKKLV 69 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l~ 69 (347)
+||.++.-+-++|..+.......+.+++..|.
T Consensus 1 eRMnQLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 1 XEVKQLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 46766655555555544444444444444443
No 16
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=29.45 E-value=2.6e+02 Score=27.63 Aligned_cols=17 Identities=6% Similarity=0.079 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHhCCCC
Q psy157 188 CICMQYLLELSKSLNID 204 (347)
Q Consensus 188 alllQyIleLa~~l~~d 204 (347)
.-|.+|++++....|..
T Consensus 197 ~aL~~~~~~~~~~~Gy~ 213 (455)
T 2dq0_A 197 LALIRFALDRLIEKGFT 213 (455)
T ss_dssp HHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHcCCE
Confidence 44568888888777754
No 17
>1ko6_B Nuclear pore complex protein NUP98; nucleoporin, autoproteolysis, transferase; 3.00A {Homo sapiens} SCOP: b.119.1.1
Probab=29.12 E-value=15 Score=27.47 Aligned_cols=17 Identities=35% Similarity=0.669 Sum_probs=13.4
Q ss_pred cccCCCCCCCCCCCCch
Q psy157 10 IEISDDEDETHPNIDTP 26 (347)
Q Consensus 10 iElSDDeDe~HPNVDk~ 26 (347)
|.=|||+|++||...++
T Consensus 5 L~DSDEEEe~~P~d~kk 21 (64)
T 1ko6_B 5 LQDSDEEEEEHPSKTST 21 (64)
T ss_pred ccccchhhhcCCCcchH
Confidence 34478888999998887
No 18
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=28.66 E-value=26 Score=31.34 Aligned_cols=32 Identities=16% Similarity=0.154 Sum_probs=25.8
Q ss_pred CcccccccccCcHHHHHHhhhCChHHHHHHHh
Q psy157 266 GLDPVEVFESLPDVLKKCFELQDTAMLQEAIA 297 (347)
Q Consensus 266 gldp~evFeslP~~mq~afet~dld~vn~vl~ 297 (347)
=++|++|+..||+++...+.+.+-..-..++.
T Consensus 7 ~~~~~~i~~kl~~~f~~~l~s~~w~eRk~al~ 38 (249)
T 2qk1_A 7 MLPEETILDKLPKDFQERITSSKWKDRVEALE 38 (249)
T ss_dssp CCCCBCCGGGSCTTHHHHHTCSSHHHHHHHHH
T ss_pred hcChhhhhhhCChhHHHHhhcCCHHHHHHHHH
Confidence 36789999999999999999998776554443
No 19
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=28.47 E-value=2.7e+02 Score=28.07 Aligned_cols=14 Identities=21% Similarity=0.218 Sum_probs=8.8
Q ss_pred HHHHHHHHHHhCCC
Q psy157 190 CMQYLLELSKSLNI 203 (347)
Q Consensus 190 llQyIleLa~~l~~ 203 (347)
|+||+++.....|.
T Consensus 191 L~~~~~d~~~~~Gy 204 (485)
T 3qne_A 191 LINYGLSFLSSKGY 204 (485)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 45777776665553
No 20
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=27.62 E-value=1.1e+02 Score=19.96 Aligned_cols=18 Identities=17% Similarity=0.117 Sum_probs=8.7
Q ss_pred HhHHHHHHHHHHHHHHHH
Q psy157 38 ERMEEQRLENEKFQQEKE 55 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~ 55 (347)
+||.+++-.-++|-.+..
T Consensus 1 eRMnQLEdKVEeLl~~~~ 18 (34)
T 3c3f_A 1 XRMXQIEXKLEXILSXLY 18 (34)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhh
Confidence 477666444444443333
No 21
>1lg4_A Doppel protein, prion-like protein; scrapie, prion protein; NMR {Homo sapiens} SCOP: d.6.1.1
Probab=26.93 E-value=59 Score=26.83 Aligned_cols=40 Identities=28% Similarity=0.365 Sum_probs=29.3
Q ss_pred HhHHHHHHHHHhhh-cchhhH--hHHHHHHHHHHHHHHHHHhCC
Q psy157 162 ANYLVIWCINLAMD-EKFDLM--DHVAHQCICMQYLLELSKSLN 202 (347)
Q Consensus 162 ~d~Ll~~af~leme-gk~~~~--~qvaHQalllQyIleLa~~l~ 202 (347)
..-++..|+|+--. ...++- -.-.||.+|-+-|+||| +++
T Consensus 78 ke~fvt~CiNaTqaaNq~E~ek~d~kl~qRiLwrLirElC-s~k 120 (129)
T 1lg4_A 78 KEAFVTGCINATQAANQGEFQKPDNKLHQQVLWRLVQELC-SLK 120 (129)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTCSSCHHHHHHHHHHHHHHH-HSS
T ss_pred HHHHHHHhhhHHHHhhHHhhhcchhHHHHHHHHHHHHHHh-ccc
Confidence 67788999998543 333332 23689999999999999 444
No 22
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=26.37 E-value=90 Score=22.06 Aligned_cols=28 Identities=25% Similarity=0.429 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy157 78 NLDELKKALAELEKEAANIRKKEEDLKK 105 (347)
Q Consensus 78 ~~~~l~~h~~kl~~~~~e~~~Kl~eLek 105 (347)
+++.|+.+.++|+..-..+....++|..
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888888888888888887776
No 23
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=25.14 E-value=1.5e+02 Score=19.39 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=16.0
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy157 38 ERMEEQRLENEKFQQEKEKTLKTLEETKKKL 68 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l 68 (347)
+||.+++-.-++|-.+...+...+.++++.|
T Consensus 1 ~RMnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 1 MKLKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4666665555555555555554455554444
No 24
>4fz4_A 0197-18KD, uncharacterized protein conserved in bacteria; surface antigen, immune system; 2.44A {Streptococcus suis}
Probab=25.07 E-value=3.3e+02 Score=23.42 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy157 86 LAELEKEAANIRKKEEDLKK 105 (347)
Q Consensus 86 ~~kl~~~~~e~~~Kl~eLek 105 (347)
+..|+.+.+++.+.|++|++
T Consensus 6 l~~~q~l~kele~eL~eLek 25 (154)
T 4fz4_A 6 VEEVQKVVKELEKELGELDK 25 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 56778888889999999988
No 25
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=24.67 E-value=99 Score=20.22 Aligned_cols=18 Identities=17% Similarity=0.187 Sum_probs=7.9
Q ss_pred HhHHHHHHHHHHHHHHHH
Q psy157 38 ERMEEQRLENEKFQQEKE 55 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~ 55 (347)
+||.+++-.-++|-.+..
T Consensus 1 eRMnQLEdKvEeLl~~~~ 18 (34)
T 2bni_A 1 XRMKQIEDKLEEILSKGH 18 (34)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHccH
Confidence 477666444444443333
No 26
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=23.83 E-value=1.3e+02 Score=19.51 Aligned_cols=30 Identities=13% Similarity=0.120 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q psy157 39 RMEEQRLENEKFQQEKEKTLKTLEETKKKL 68 (347)
Q Consensus 39 R~~e~~~e~e~l~~~~~~~~~~l~e~~~~l 68 (347)
||.+++-..++|-.+.......+.+++..|
T Consensus 1 RMnQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 1 RMKQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 565665555555555544444444444443
No 27
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=22.93 E-value=2.5e+02 Score=21.29 Aligned_cols=22 Identities=14% Similarity=0.053 Sum_probs=9.3
Q ss_pred hHHHHHhHHHHHHHHHHHHHHH
Q psy157 33 HQARVERMEEQRLENEKFQQEK 54 (347)
Q Consensus 33 Hq~R~eR~~e~~~e~e~l~~~~ 54 (347)
+++|-+|..++++.-+.|+.+-
T Consensus 31 R~krk~r~~e~~~r~~~L~~eN 52 (78)
T 1gu4_A 31 RDKAKMRNLETQHKVLELTAEN 52 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444444444333
No 28
>2q73_A MAZG, hypothetical protein; NTP-ppase, hydrolase; 1.80A {Vibrio SP} PDB: 2q9l_A
Probab=22.82 E-value=35 Score=26.60 Aligned_cols=22 Identities=9% Similarity=0.120 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhCCCCCcchh
Q psy157 188 CICMQYLLELSKSLNIDPRACI 209 (347)
Q Consensus 188 alllQyIleLa~~l~~dpr~~v 209 (347)
+=||-||..||+.+|+||-.++
T Consensus 60 gDvL~~l~~lA~~lgiDle~al 81 (100)
T 2q73_A 60 YDVLYYVCALANIHGVNLEKTH 81 (100)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHH
Confidence 3356688889999998885443
No 29
>3ygs_P Procaspase 9; apoptosis, caspase activation, caspase recruitment, recognition complex; 2.50A {Homo sapiens} SCOP: a.77.1.3
Probab=22.59 E-value=99 Score=23.90 Aligned_cols=55 Identities=11% Similarity=0.036 Sum_probs=38.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHhCC-CCCcchhHHhHhhhcccCchhHHHHHHHHHHH
Q psy157 180 LMDHVAHQCICMQYLLELSKSLN-IDPRACIGSFFSKIQIAEPDYKASFDDELKSF 234 (347)
Q Consensus 180 ~~~qvaHQalllQyIleLa~~l~-~dpr~~v~~FF~ki~~~~~~~~~~F~~dv~~~ 234 (347)
.+..|.-..++=+.-.+.-++.+ ..+++.++.|+..+.+.+|.|...|.+-+..+
T Consensus 26 vld~L~~~~vlt~~~~e~I~~~~~~t~~~~ar~Lld~L~~rG~~Af~~F~~aL~et 81 (97)
T 3ygs_P 26 LWDVLLSRELFRPHMIEDIQRAGSGSRRDQARQLIIDLETRGSQALPLFISCLEDT 81 (97)
T ss_dssp THHHHHHTTSSCHHHHHHHHTSTTCCHHHHHHHHHHHHTTSCTTHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCHHHHHHHHhccCCChHHHHHHHHHHHHHcChHHHHHHHHHHHHc
Confidence 45555555555555555555542 24567789999999999999999999888763
No 30
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=22.37 E-value=1.4e+02 Score=19.41 Aligned_cols=28 Identities=11% Similarity=0.169 Sum_probs=12.5
Q ss_pred HhHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy157 38 ERMEEQRLENEKFQQEKEKTLKTLEETK 65 (347)
Q Consensus 38 eR~~e~~~e~e~l~~~~~~~~~~l~e~~ 65 (347)
+||-+++-.-++|-.+.......+.+++
T Consensus 1 eRMnQLE~kVEeLl~~n~~Le~eV~rLk 28 (34)
T 2oxj_A 1 XRMXQLEXKVXELLXKNXHLEXEVXRLK 28 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 4676655444555444433333333333
No 31
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=22.14 E-value=70 Score=28.68 Aligned_cols=27 Identities=15% Similarity=0.139 Sum_probs=11.7
Q ss_pred CChHHHHHHHhcCCHHHHHHHHHHhhh
Q psy157 287 QDTAMLQEAIASLSPEEATYHMKRCVD 313 (347)
Q Consensus 287 ~dld~vn~vl~~M~veeAE~~~~r~~d 313 (347)
=+.+.+-.+|..|+.+++..+++.+-+
T Consensus 79 l~~d~~~~ll~~l~~d~~~~ll~~l~~ 105 (278)
T 2yvy_A 79 LPPWRLREILEELSLDDLADALQAVRK 105 (278)
T ss_dssp SCHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHhCCC
Confidence 334444444444444444444444433
No 32
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=22.11 E-value=4.7e+02 Score=24.09 Aligned_cols=93 Identities=12% Similarity=0.127 Sum_probs=46.2
Q ss_pred cCCCCC-CCCCCCCchhhhhHh--hHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhcc---ccHHHHHHH
Q psy157 12 ISDDED-ETHPNIDTPSLFRWR--HQARVERMEEQRLENEKFQQEKEKTLKTLEETKKKLVESEQAGA---NNLDELKKA 85 (347)
Q Consensus 12 lSDDeD-e~HPNVDk~S~~Rwk--Hq~R~eR~~e~~~e~e~l~~~~~~~~~~l~e~~~~l~~~~~~~~---e~~~~l~~h 85 (347)
.++.++ -.-|.|++...-|-- +.-+-++ +.+-.+.+.|.-++.++..-|.+|+.++..|..-.. +-++.++..
T Consensus 128 ~e~~~~f~lp~gi~~e~I~~SYSl~~Lkk~~-~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqd 206 (242)
T 3uux_B 128 PNFQDSFLIPPGVETAAISSSYSPSALKSFS-QTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQN 206 (242)
T ss_dssp -----------CCCCCGGGGSCCSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCCCHHHhcccccHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344444 344446665444433 2222222 233355689999999999999999999998743200 112334444
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q psy157 86 LAELEKEAANIRKKEEDLKK 105 (347)
Q Consensus 86 ~~kl~~~~~e~~~Kl~eLek 105 (347)
-..|+.....++.+++.++.
T Consensus 207 El~LE~eL~~V~~Rief~qE 226 (242)
T 3uux_B 207 QLLLEDNLKQIDDRLDFLEE 226 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444443
No 33
>1vz0_A PARB, chromosome partitioning protein PARB; nuclear protein, chromosome segregation, DNA-binding, helix-turn-helix; 2.3A {Thermus thermophilus} SCOP: a.4.14.1 d.268.1.1
Probab=21.84 E-value=67 Score=28.81 Aligned_cols=46 Identities=24% Similarity=0.346 Sum_probs=36.4
Q ss_pred ccCcHHHHHHhhhCChHHHH-HHHhcCCHHHHHHHHHHhhhcCcccc
Q psy157 274 ESLPDVLKKCFELQDTAMLQ-EAIASLSPEEATYHMKRCVDSGLWVP 319 (347)
Q Consensus 274 eslP~~mq~afet~dld~vn-~vl~~M~veeAE~~~~r~~dsGlw~p 319 (347)
-.||++++++|..|.+..-. .+|..|+.++-..++++++.-|+=|.
T Consensus 158 ~~l~~~v~~~l~~g~is~~~A~~L~~l~~~~q~~l~~~i~~~~lsv~ 204 (230)
T 1vz0_A 158 LQLPPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVR 204 (230)
T ss_dssp GGSCHHHHHHHHTTSSCHHHHHHHHTSCGGGHHHHHHHHHHTCCCHH
T ss_pred HcCCHHHHHHHHcCCCCHHHHHHHHcCCcHHHHHHHHHHHHcCCCHH
Confidence 37999999999999886553 56888988877778888888776443
No 34
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=21.35 E-value=55 Score=30.07 Aligned_cols=50 Identities=18% Similarity=0.277 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCccccCCCCCCccccccCC
Q psy157 79 LDELKKALAELEKEAANIRKKEEDLKKKEKITPWNVDTISKPGFTKTVVNKK 130 (347)
Q Consensus 79 ~~~l~~h~~kl~~~~~e~~~Kl~eLek~Ek~~~insD~Ish~GF~kS~INk~ 130 (347)
++.++.++.+.........+-+.+|+..-.+-.|+-++ .++.=+++|+.+
T Consensus 171 Ie~Lk~e~~e~~te~~p~~k~~~qly~~vt~i~w~~~~--~~~~i~g~~~~~ 220 (250)
T 2ve7_C 171 LERLEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWEYEC--EPGMVKGIHHGP 220 (250)
T ss_dssp CC-------------CTTTHHHHHHHHHHHCCEECSCC--TTTCEEEEC---
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhceeeccc--Ccchhceeeecc
Confidence 33444444444444444456777887766666688777 577777777763
No 35
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=20.28 E-value=1.5e+02 Score=25.08 Aligned_cols=15 Identities=27% Similarity=0.446 Sum_probs=8.1
Q ss_pred HHHhhhcCccccCcc
Q psy157 308 MKRCVDSGLWVPDAK 322 (347)
Q Consensus 308 ~~r~~dsGlw~p~~~ 322 (347)
.+.+-..|+--|..+
T Consensus 140 Y~~Lk~~G~~FP~~~ 154 (163)
T 1x5b_A 140 IKSMKEEGITFPPAG 154 (163)
T ss_dssp HHHHHTTTCCCCCCS
T ss_pred HHHHHHcCCCCCCCC
Confidence 344455676666543
Done!