Query psy15702
Match_columns 259
No_of_seqs 165 out of 723
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:19:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gk3_A Putative cytoplasmic pr 98.1 4.6E-06 1.6E-10 72.0 6.8 162 4-193 72-256 (256)
2 3soz_A ORF 245 protein, cytopl 97.8 8.3E-05 2.8E-09 63.9 9.7 163 3-191 64-247 (248)
3 3rht_A (gatase1)-like protein; 97.8 0.00023 8E-09 61.5 11.3 46 3-48 44-90 (259)
4 4e5v_A Putative THUA-like prot 97.5 0.002 6.8E-08 56.2 13.4 189 5-205 54-267 (281)
5 2zuv_A Lacto-N-biose phosphory 96.8 0.0073 2.5E-07 58.2 10.6 65 5-70 496-570 (759)
6 1t0b_A THUA-like protein; treh 94.1 0.04 1.4E-06 47.1 4.2 42 2-43 60-103 (252)
7 3tty_A Beta-GAL, beta-galactos 82.5 1.1 3.9E-05 43.4 4.6 40 6-46 449-488 (675)
8 2d59_A Hypothetical protein PH 74.5 7.3 0.00025 29.7 6.2 57 4-68 72-128 (144)
9 3ff4_A Uncharacterized protein 72.5 4.5 0.00015 30.2 4.4 56 5-69 55-110 (122)
10 3hly_A Flavodoxin-like domain; 68.0 10 0.00035 29.2 5.8 62 8-69 50-114 (161)
11 1y81_A Conserved hypothetical 64.2 17 0.00059 27.3 6.3 56 4-67 64-119 (138)
12 1iuk_A Hypothetical protein TT 58.9 10 0.00035 28.7 4.1 56 4-67 65-120 (140)
13 3hm2_A Precorrin-6Y C5,15-meth 56.0 5.7 0.00019 30.3 2.2 56 8-68 93-148 (178)
14 3id6_C Fibrillarin-like rRNA/T 55.2 10 0.00035 31.5 3.8 61 7-69 144-212 (232)
15 2fz5_A Flavodoxin; alpha/beta 54.0 6.5 0.00022 28.8 2.2 63 6-68 43-112 (137)
16 2lfw_B NEPR anti sigma factor; 50.6 4.6 0.00016 26.5 0.7 35 216-254 25-61 (62)
17 3fni_A Putative diflavin flavo 50.3 29 0.00099 26.6 5.5 61 8-69 55-119 (159)
18 3dp7_A SAM-dependent methyltra 49.1 17 0.00059 31.7 4.5 38 6-43 245-286 (363)
19 3cgg_A SAM-dependent methyltra 48.6 12 0.00042 28.6 3.1 60 8-68 106-170 (195)
20 5nul_A Flavodoxin; electron tr 48.5 11 0.00039 27.7 2.8 64 6-69 42-112 (138)
21 2ko4_B General control protein 47.4 5.3 0.00018 22.7 0.5 14 232-245 15-28 (34)
22 3e05_A Precorrin-6Y C5,15-meth 47.3 12 0.0004 29.5 2.8 55 8-66 107-161 (204)
23 2duw_A Putative COA-binding pr 44.4 30 0.001 26.1 4.7 57 4-68 65-121 (145)
24 1t0i_A YLR011WP; FMN binding p 43.5 7.2 0.00024 30.7 1.0 62 6-70 81-150 (191)
25 1l3i_A Precorrin-6Y methyltran 43.0 7 0.00024 29.9 0.8 57 8-68 99-155 (192)
26 2a5l_A Trp repressor binding p 42.2 13 0.00046 29.1 2.4 65 5-71 67-146 (200)
27 3njr_A Precorrin-6Y methylase; 42.0 21 0.00072 28.3 3.6 56 8-69 121-176 (204)
28 1yzh_A TRNA (guanine-N(7)-)-me 41.2 23 0.0008 28.0 3.8 57 8-67 110-176 (214)
29 3evz_A Methyltransferase; NYSG 40.5 7.6 0.00026 31.2 0.7 42 25-68 160-201 (230)
30 3mcz_A O-methyltransferase; ad 40.3 23 0.00079 30.5 3.9 38 6-43 245-286 (352)
31 2nu8_A Succinyl-COA ligase [AD 40.3 20 0.00069 30.6 3.4 59 5-67 58-118 (288)
32 2q9u_A A-type flavoprotein; fl 39.6 20 0.00067 31.8 3.4 64 6-69 304-374 (414)
33 2ip2_A Probable phenazine-spec 39.0 23 0.0008 30.2 3.7 39 5-43 229-271 (334)
34 3e23_A Uncharacterized protein 38.8 21 0.00072 28.0 3.1 62 7-68 100-177 (211)
35 3hjh_A Transcription-repair-co 38.0 32 0.0011 31.8 4.6 38 27-67 371-409 (483)
36 1ydg_A Trp repressor binding p 37.7 13 0.00045 29.6 1.7 63 6-70 75-152 (211)
37 1e5d_A Rubredoxin\:oxygen oxid 37.6 12 0.00041 32.9 1.6 61 7-69 301-368 (402)
38 3lpm_A Putative methyltransfer 37.1 21 0.00072 29.4 3.0 39 26-68 158-196 (259)
39 2yv1_A Succinyl-COA ligase [AD 36.8 26 0.0009 30.0 3.6 60 5-68 64-125 (294)
40 3h2b_A SAM-dependent methyltra 36.8 25 0.00084 27.3 3.2 61 8-68 101-177 (203)
41 3kw2_A Probable R-RNA methyltr 35.2 33 0.0011 28.9 3.9 34 9-46 190-223 (257)
42 3lcc_A Putative methyl chlorid 35.0 37 0.0013 27.0 4.1 61 8-68 131-202 (235)
43 3k1y_A Oxidoreductase; structu 34.7 33 0.0011 27.3 3.6 67 6-73 82-157 (191)
44 3bzb_A Uncharacterized protein 34.5 48 0.0016 27.7 4.9 61 8-68 162-232 (281)
45 3fvw_A Putative NAD(P)H-depend 33.6 56 0.0019 25.7 4.9 67 6-72 64-147 (192)
46 1v6z_A Hypothetical protein TT 33.5 34 0.0012 28.1 3.7 33 10-46 174-206 (228)
47 1t5b_A Acyl carrier protein ph 33.2 32 0.0011 26.8 3.3 64 6-69 83-170 (201)
48 1ixk_A Methyltransferase; open 33.1 32 0.0011 29.5 3.6 41 27-67 229-269 (315)
49 1z85_A Hypothetical protein TM 33.0 35 0.0012 28.3 3.7 24 10-33 180-203 (234)
50 1vhy_A Hypothetical protein HI 32.5 34 0.0011 28.8 3.5 34 10-47 190-223 (257)
51 2egv_A UPF0088 protein AQ_165; 31.9 34 0.0012 28.2 3.4 32 11-46 179-210 (229)
52 1x19_A CRTF-related protein; m 31.7 54 0.0018 28.3 4.9 37 8-44 255-295 (359)
53 2zki_A 199AA long hypothetical 31.2 27 0.00094 27.2 2.6 63 6-70 67-144 (199)
54 2ohh_A Type A flavoprotein FPR 30.9 14 0.00047 32.5 0.8 63 7-69 305-375 (404)
55 1oi7_A Succinyl-COA synthetase 30.1 40 0.0014 28.7 3.6 59 5-67 58-118 (288)
56 1vhk_A Hypothetical protein YQ 29.9 37 0.0013 28.7 3.4 33 11-47 200-232 (268)
57 3npg_A Uncharacterized DUF364 29.8 8.7 0.0003 32.4 -0.7 61 5-73 160-220 (249)
58 4df3_A Fibrillarin-like rRNA/T 29.8 21 0.00073 29.6 1.8 41 7-47 145-185 (233)
59 4e8b_A Ribosomal RNA small sub 29.3 39 0.0013 28.2 3.4 35 9-47 186-220 (251)
60 3klb_A Putative flavoprotein; 29.2 16 0.00055 28.1 0.9 40 7-48 76-119 (162)
61 1oi4_A Hypothetical protein YH 28.9 1.1E+02 0.0036 23.9 5.8 67 7-73 84-165 (193)
62 3gwz_A MMCR; methyltransferase 28.7 26 0.00089 30.6 2.3 39 5-43 264-306 (369)
63 2yv2_A Succinyl-COA synthetase 28.4 41 0.0014 28.8 3.4 60 5-68 64-126 (297)
64 3i53_A O-methyltransferase; CO 28.2 53 0.0018 27.9 4.2 39 5-43 231-273 (332)
65 1rtt_A Conserved hypothetical 27.9 43 0.0015 26.1 3.2 64 6-69 69-143 (193)
66 2fca_A TRNA (guanine-N(7)-)-me 27.8 71 0.0024 25.2 4.6 57 8-67 107-173 (213)
67 4a6d_A Hydroxyindole O-methylt 27.8 41 0.0014 29.2 3.4 38 6-43 241-282 (353)
68 2yxd_A Probable cobalt-precorr 27.7 43 0.0015 25.1 3.1 54 8-68 99-152 (183)
69 1kwg_A Beta-galactosidase; TIM 27.3 53 0.0018 31.2 4.3 36 7-46 450-485 (645)
70 1qzz_A RDMB, aclacinomycin-10- 27.2 26 0.00088 30.4 2.0 40 5-44 244-287 (374)
71 1gpw_B Amidotransferase HISH; 27.1 51 0.0018 25.9 3.6 35 8-43 41-83 (201)
72 1rkq_A Hypothetical protein YI 27.0 1.3E+02 0.0045 24.6 6.4 45 18-67 19-63 (282)
73 2r3s_A Uncharacterized protein 26.9 28 0.00096 29.5 2.1 40 5-44 228-271 (335)
74 2h1q_A Hypothetical protein; Z 26.6 16 0.00054 31.2 0.4 60 5-73 182-241 (270)
75 2vzf_A NADH-dependent FMN redu 26.6 16 0.00056 28.8 0.5 61 7-70 67-138 (197)
76 1tw3_A COMT, carminomycin 4-O- 26.5 23 0.00078 30.6 1.5 39 5-43 245-287 (360)
77 2csu_A 457AA long hypothetical 26.4 98 0.0034 28.1 5.8 64 4-71 59-129 (457)
78 3reo_A (ISO)eugenol O-methyltr 25.9 47 0.0016 29.0 3.4 38 5-43 258-299 (368)
79 3q87_B N6 adenine specific DNA 25.9 43 0.0015 25.5 2.8 57 8-67 77-143 (170)
80 3lst_A CALO1 methyltransferase 25.9 37 0.0013 29.3 2.7 38 5-43 244-285 (348)
81 1ayg_A Cytochrome C-552; elect 25.3 50 0.0017 21.5 2.8 16 21-36 63-78 (80)
82 1xtp_A LMAJ004091AAA; SGPP, st 25.0 31 0.0011 27.7 1.9 60 8-67 157-232 (254)
83 1ycg_A Nitric oxide reductase; 25.0 17 0.00058 31.9 0.3 63 8-70 301-368 (398)
84 1fbn_A MJ fibrillarin homologu 24.7 38 0.0013 27.1 2.4 39 8-46 142-180 (230)
85 3dh0_A SAM dependent methyltra 24.2 33 0.0011 26.8 1.9 61 8-68 105-176 (219)
86 3dtn_A Putative methyltransfer 24.1 35 0.0012 27.1 2.1 37 8-44 108-148 (234)
87 2g0t_A Conserved hypothetical 23.8 87 0.003 27.6 4.7 58 9-68 89-148 (350)
88 3dmy_A Protein FDRA; predicted 23.7 68 0.0023 29.6 4.1 62 5-71 32-94 (480)
89 1g8a_A Fibrillarin-like PRE-rR 23.6 31 0.0011 27.4 1.6 39 7-46 141-180 (227)
90 1jql_B DNA polymerase III, del 23.5 1.6E+02 0.0056 21.6 5.7 60 8-67 75-137 (140)
91 1ej0_A FTSJ; methyltransferase 23.4 78 0.0027 23.1 3.9 39 8-46 87-138 (180)
92 1c75_A Cytochrome C-553; heme, 23.4 59 0.002 20.6 2.8 17 20-36 53-69 (71)
93 1fp2_A Isoflavone O-methyltran 23.2 80 0.0027 27.1 4.4 38 5-43 243-287 (352)
94 3p9c_A Caffeic acid O-methyltr 23.2 61 0.0021 28.2 3.6 38 5-43 256-297 (364)
95 1ws6_A Methyltransferase; stru 23.1 29 0.001 25.8 1.3 39 9-47 110-150 (171)
96 3pgv_A Haloacid dehalogenase-l 23.1 1.2E+02 0.0042 24.8 5.4 45 17-66 34-78 (285)
97 1sqs_A Conserved hypothetical 22.9 31 0.0011 28.1 1.5 66 7-72 77-153 (242)
98 2vrn_A Protease I, DR1199; cys 22.8 1.8E+02 0.0063 22.1 6.2 36 8-43 74-114 (190)
99 3f5d_A Protein YDEA; unknow pr 22.7 1.3E+02 0.0045 23.9 5.3 38 5-43 59-99 (206)
100 2cs7_A Pneumococcal histidine 22.7 38 0.0013 21.6 1.5 29 8-36 20-55 (55)
101 2l48_A N-acetylmuramoyl-L-alan 22.5 53 0.0018 22.9 2.4 19 20-38 61-79 (85)
102 2exv_A Cytochrome C-551; alpha 22.5 66 0.0023 20.8 3.0 16 21-36 65-80 (82)
103 2glo_A Brinker CG9653-PA; prot 22.4 1.4E+02 0.0048 18.2 5.0 37 18-66 2-38 (59)
104 3l8d_A Methyltransferase; stru 22.3 66 0.0023 25.4 3.4 61 8-68 115-195 (242)
105 3gfs_A FMN-dependent NADPH-azo 22.2 15 0.00052 28.3 -0.5 66 6-71 60-133 (174)
106 1zg3_A Isoflavanone 4'-O-methy 22.1 72 0.0025 27.4 3.9 38 5-43 248-292 (358)
107 4hcj_A THIJ/PFPI domain protei 22.0 1.7E+02 0.0058 22.7 5.7 66 7-73 67-148 (177)
108 2fcr_A Flavodoxin; electron tr 21.6 25 0.00085 27.1 0.6 64 6-69 42-122 (173)
109 3pdw_A Uncharacterized hydrola 21.4 1.4E+02 0.0047 24.0 5.3 49 23-73 24-72 (266)
110 2d0s_A Cytochrome C, cytochrom 21.4 67 0.0023 20.7 2.8 17 20-36 61-77 (79)
111 2prs_A High-affinity zinc upta 21.3 1.2E+02 0.0041 25.4 5.0 51 14-67 199-249 (284)
112 2zfu_A Nucleomethylin, cerebra 21.1 62 0.0021 25.2 3.0 60 8-68 114-174 (215)
113 1t0b_A THUA-like protein; treh 20.9 1E+02 0.0036 25.5 4.5 39 156-195 191-229 (252)
114 2yxe_A Protein-L-isoaspartate 20.9 43 0.0015 26.2 1.9 36 8-47 145-180 (215)
115 3zzp_A TS9, ribosomal protein 20.8 70 0.0024 21.6 2.7 30 5-36 41-74 (77)
116 4hs4_A Chromate reductase; tri 20.8 95 0.0032 24.6 4.0 63 7-69 71-144 (199)
117 4dzr_A Protein-(glutamine-N5) 20.8 32 0.0011 26.6 1.2 36 27-65 147-184 (215)
118 1fex_A TRF2-interacting telome 20.7 84 0.0029 20.0 3.0 19 19-37 2-20 (59)
119 4ici_A Putative flavoprotein; 20.7 31 0.0011 26.8 1.0 40 6-47 84-127 (171)
120 3ajd_A Putative methyltransfer 20.7 77 0.0026 26.2 3.6 57 7-63 154-230 (274)
121 4gmf_A Yersiniabactin biosynth 20.4 1.2E+02 0.0039 26.8 4.9 62 4-67 61-122 (372)
122 2fp4_A Succinyl-COA ligase [GD 20.3 60 0.002 27.9 2.9 60 5-68 65-127 (305)
123 4dik_A Flavoprotein; TM0755, e 20.2 89 0.003 28.0 4.1 62 7-69 317-384 (410)
124 3hnr_A Probable methyltransfer 20.0 77 0.0026 24.6 3.4 37 8-44 105-145 (220)
125 3l5o_A Uncharacterized protein 20.0 21 0.00073 30.4 -0.1 61 4-73 181-241 (270)
126 3s2y_A Chromate reductase; ura 25.2 22 0.00077 28.4 0.0 65 6-70 70-145 (199)
No 1
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=98.10 E-value=4.6e-06 Score=72.03 Aligned_cols=162 Identities=17% Similarity=0.185 Sum_probs=88.5
Q ss_pred hhhcCCccEEEEcC-CCCCCC------------HHHHHHHHHHHHcCCcEEEEecCCCCC---CCCccHHH-HHHHhCcc
Q psy15702 4 PELLRAASLFICTG-PREQFT------------ITELNSLKTYLDEGGSLLIALGEEGER---GSSTNINF-LLEQYGVS 66 (259)
Q Consensus 4 ~~ip~~advLVI~~-P~~~fs------------~~E~~~L~~fl~~GG~llv~~~~~~~~---~~~~nln~-LL~~~Gi~ 66 (259)
.+.++++|++|+.+ +.+.|+ +..+++|++|+++||.++++.++.... ....-.+. |-+-+++.
T Consensus 72 ~~~L~~yDvIIl~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~igG~~s~~~~~g~g~~~~t~l~~vLPv~ 151 (256)
T 2gk3_A 72 IDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVI 151 (256)
T ss_dssp HHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEECSTTSSSCGGGTTCGGGSTTGGGSSEE
T ss_pred hhHHhcCCEEEEeCCchhhcccccccccccccChHHHHHHHHHHHhCCEEEEECChhhhhccccCCccccCChHhhCCee
Confidence 35678999999987 444455 788999999999999999996654210 00111111 23334555
Q ss_pred cCCce--e-eeccCCcccCCccccccCccchhhhhhhhcCCCccccccCcceEEecccceeeccCCcceEEeeCCccccc
Q psy15702 67 VNSDC--V-VRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVTEDSLASSLHFVYPYGASLNVIKPSVPVFSTGSASCPL 143 (259)
Q Consensus 67 ~~~~~--V-~d~~~~~~~~P~~~~i~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~p~~~~l~v~~~~~pll~ts~~s~p~ 143 (259)
..... + .... +.|... ...|+++.... ....+..+- .+.....++.|++. +
T Consensus 152 ~~~~~~~~~~~~~----~~~~~~-------------~~~hpi~~~l~--~~p~~~~~~-~~~~~~~a~vl~~~-~----- 205 (256)
T 2gk3_A 152 MLDGDDRVEKPEG----ICAEAV-------------SPEHPVVNGFS--DYPVFLGYN-QAVARDDADVVLTI-N----- 205 (256)
T ss_dssp ECSSCCEEEEEEE----EEEEES-------------STTSTTTTTCC--SCCEEEEEE-CEEECTTCEEEEEE-T-----
T ss_pred eccCccccccCCC----ceeeee-------------cCCCchhcccc--cCCccccEE-EeeeCCCCEEEEEe-C-----
Confidence 53211 1 0000 000000 01233331111 111122111 12223336667766 2
Q ss_pred CcceEEEEeecCCCcEEEEEecCcc--ccc-ccccccccHHHHHHHHHhhcCC
Q psy15702 144 NRPVVSFYRDKTRGGKLVVLGSAAL--FSD-QYLEREENDKMRQIILSFLLTD 193 (259)
Q Consensus 144 ~~pv~A~~~~~~~~grvvViGs~~~--~~d-~~~~~~~N~~f~~n~i~wL~~~ 193 (259)
..|+.|..+ .++||++++++... ... .|.....+..|+.+++.||+++
T Consensus 206 ~~PlLa~~~--~G~GRv~~l~sd~~~~W~~~~~~~~~~~~~l~~~~v~wl~~~ 256 (256)
T 2gk3_A 206 NDPLLVFGE--YQQGKTACFMSDCSPHWGTQQFMSWPFYTDLWVNTLQFIARK 256 (256)
T ss_dssp TEEEEEEEE--ETTEEEEEECSCSSTTTBCHHHHTCTTHHHHHHHHHHHHSCC
T ss_pred CCcEEEEec--cCCcEEEEEccCCccccccccccCCchHHHHHHHHHHHHhcC
Confidence 247877766 48899999986432 112 3444578999999999999863
No 2
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=97.83 E-value=8.3e-05 Score=63.88 Aligned_cols=163 Identities=19% Similarity=0.195 Sum_probs=90.5
Q ss_pred ChhhcCCccEEEEcCCCC-CC------------CHHHHHHHHHHHHcCCcEEEEecCCCCC---CCCccHH-HHHHHhCc
Q psy15702 3 TPELLRAASLFICTGPRE-QF------------TITELNSLKTYLDEGGSLLIALGEEGER---GSSTNIN-FLLEQYGV 65 (259)
Q Consensus 3 t~~ip~~advLVI~~P~~-~f------------s~~E~~~L~~fl~~GG~llv~~~~~~~~---~~~~nln-~LL~~~Gi 65 (259)
+.+.+++.|++|+..... .+ ++.++++|++|+.+||.++++.++..-. ....-.+ .|-+-+++
T Consensus 64 ~~~~L~~yDvIIl~d~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~gG~~~f~g~~~~g~~~~t~l~~vLPV 143 (248)
T 3soz_A 64 TAEALACYDAIVISDIGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMIGGYLSFTGIEAKANYKNTVLAEVLPV 143 (248)
T ss_dssp SHHHHHTCSEEEEESCCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEECSTTSSSCGGGCSCGGGSTHHHHSSE
T ss_pred ChHHHhcCCEEEEcCCCcchhccCccccccccCCHHHHHHHHHHHHhCCEEEEEcCchhccccccccccccCcHHHhCCc
Confidence 456779999999998765 34 6788999999999999999998875310 0111112 14445577
Q ss_pred ccCC-ceeeeccCCcccCCccccccCccchhhhhhhhcCCCccccccCcceEEecccceeeccCCcceEEeeCCcccccC
Q psy15702 66 SVNS-DCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVTEDSLASSLHFVYPYGASLNVIKPSVPVFSTGSASCPLN 144 (259)
Q Consensus 66 ~~~~-~~V~d~~~~~~~~P~~~~i~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~p~~~~l~v~~~~~pll~ts~~s~p~~ 144 (259)
...+ +..+... .-+.|.. ....|+++.... .+...+-+- .+.....++.|++.. .
T Consensus 144 ~~~~~~~r~e~p--~g~~~~~-------------~~~~Hpit~~l~--~~p~~~g~~-~v~~k~ga~vl~~~~------g 199 (248)
T 3soz_A 144 DMLDVDDRVELP--QGCKAVN-------------TAVEHVITQPFS--EWPPLLGYN-KLIAKENSQVLAEIN------G 199 (248)
T ss_dssp ECCSSCCEEEEE--EEEEEEE-------------CSSCCTTTTTCS--EEEEEEEEE-CCEECSSCEEEEEET------T
T ss_pred cccccCcccccC--CCccccc-------------cccCChhhcccc--cCCccccce-eeEeCCCCEEEEecC------C
Confidence 7642 2222100 0000100 011333332111 112122111 112222266777753 2
Q ss_pred cceEEEEeecCCCcEEEEEecCcc--cc-cccccccccHHHHHHHHHhhc
Q psy15702 145 RPVVSFYRDKTRGGKLVVLGSAAL--FS-DQYLEREENDKMRQIILSFLL 191 (259)
Q Consensus 145 ~pv~A~~~~~~~~grvvViGs~~~--~~-d~~~~~~~N~~f~~n~i~wL~ 191 (259)
.|+.|..+ .+.||++.+++... .. ..|..-..-..|+.++++||+
T Consensus 200 ~PlLa~~~--~G~GRv~~lasD~~~~W~~~~~~~w~~y~~fw~~lv~WL~ 247 (248)
T 3soz_A 200 DPLLVMGT--YHKGKVCCFASDCSPHWGSPQFLQWEHYATFWCNVLHTIK 247 (248)
T ss_dssp EEEEEEEE--ETTEEEEEESSCSSTTTSCHHHHTCSSHHHHHHHHHHHHC
T ss_pred ceEEEEec--cCCcEEEEEecCCCccccccccccCccHHHHHHHHHHHHh
Confidence 47777765 48999999996322 11 123223567899999999996
No 3
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=97.75 E-value=0.00023 Score=61.46 Aligned_cols=46 Identities=28% Similarity=0.351 Sum_probs=37.9
Q ss_pred ChhhcCCccEEEEcCC-CCCCCHHHHHHHHHHHHcCCcEEEEecCCC
Q psy15702 3 TPELLRAASLFICTGP-REQFTITELNSLKTYLDEGGSLLIALGEEG 48 (259)
Q Consensus 3 t~~ip~~advLVI~~P-~~~fs~~E~~~L~~fl~~GG~llv~~~~~~ 48 (259)
+.+.+++.|++|+... ...+++..+++|++|+++||.++++.++..
T Consensus 44 ~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~GGgLi~~gG~~s 90 (259)
T 3rht_A 44 VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKAGCGLVMLGGWES 90 (259)
T ss_dssp SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHTTCEEEEECSTTS
T ss_pred ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHhCCeEEEecCccc
Confidence 3466789999999853 346999999999999999999999877643
No 4
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=97.48 E-value=0.002 Score=56.22 Aligned_cols=189 Identities=10% Similarity=-0.008 Sum_probs=101.4
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHH-H-hC---------cccCCceee
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE-Q-YG---------VSVNSDCVV 73 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~-~-~G---------i~~~~~~V~ 73 (259)
+.++++|+||+......++++..++|.+|+++||.++.+=.........+.++.|+- . |+ +.++++..+
T Consensus 54 ~~L~~~D~vV~~~~~~~l~~~~~~~l~~yV~~Ggglv~~H~a~~~~~~w~~y~~liG~g~f~~r~~~~gp~~~~~~g~~v 133 (281)
T 4e5v_A 54 LDFSPYQLVVLDYNGDSWPEETNRRFLEYVQNGGGVVIYHAADNAFSKWPEFNRICALGGWEGRNENSGPYVYWKDGKLV 133 (281)
T ss_dssp CCCTTCSEEEECCCSSCCCHHHHHHHHHHHHTTCEEEEEGGGGGSCTTCHHHHHHHSCBCCTTCSGGGCCEEEEETTEEE
T ss_pred hhhhcCCEEEEeCCCCcCCHHHHHHHHHHHHcCCCEEEEecccccCCCCHHHHHheecccccccccccccceeecccccc
Confidence 358999999988877789999999999999999999888543221112234444444 2 21 222333323
Q ss_pred -eccCCc-ccCCccccccCccchhhhhhhhcCCCccccccCcce----EEecccceeeccCCcceEEeeCCcccc----c
Q psy15702 74 -RCHFYK-YFHPKECFIGNGVLNRGIAEALHRDVTEDSLASSLH----FVYPYGASLNVIKPSVPVFSTGSASCP----L 143 (259)
Q Consensus 74 -d~~~~~-~~~P~~~~i~~~i~~~~i~~~~~~~i~~~~~~~~~~----~~~p~~~~l~v~~~~~pll~ts~~s~p----~ 143 (259)
|.+... ..||... ...+ ......||++...... .. -.|..-. .....+.+|+++....++ .
T Consensus 134 ~~~~~g~~~~Hp~~~---~~~v---~v~~~~HPit~Gl~~~-~~~~~dE~Y~~~~--~p~~~~~VL~t~~~~~~~~~~g~ 204 (281)
T 4e5v_A 134 KDSSAGPGGSHGRQH---EYVL---NGRDKVHPVVKGLPLK-WRHAKDELYDRMR--GPGNIRDILYTAYSDKETNGSGR 204 (281)
T ss_dssp EECCSCCSCBCCSCE---EEEE---EESCSSSTTTTTSCSE-EEEEEECCCBSCB--SCCCEEEEEEEEECCGGGTCCSS
T ss_pred cccccccccCCCCCc---eEEE---EEcCCCCchhhCCCCc-ccccccCCccccc--CCCCCCEEEEEEeccCcCCCCCC
Confidence 433222 3455321 0000 0112345555322210 00 0111110 111125677777665442 2
Q ss_pred CcceEEEEeecCCCcEEEEEecCcc----cccccccccccHHHHHHHHHhhcCCCCCccccCCCCC
Q psy15702 144 NRPVVSFYRDKTRGGKLVVLGSAAL----FSDQYLEREENDKMRQIILSFLLTDDINLNQIDADDA 205 (259)
Q Consensus 144 ~~pv~A~~~~~~~~grvvViGs~~~----~~d~~~~~~~N~~f~~n~i~wL~~~~~~l~~I~~k~~ 205 (259)
..|++-..+ .++||+...+=++- -+...+...+=++++.|.+.|+++. .....|+..-+
T Consensus 205 ~~Pv~W~~~--~g~GRvFyt~lGH~~~~w~~~~~~~~p~f~~ll~~gi~Waa~g-~~~~~~p~~~~ 267 (281)
T 4e5v_A 205 EEPLVFTVD--YGNARIFHTMLGHAGATTEDNIAMQCTGFQVLLLRGAEWAATG-KVTQKVPKDFP 267 (281)
T ss_dssp EEEEEEEEC--STTCEEEEECCCCCCSSSSSCHHHHBHHHHHHHHHHHHHHHHS-CCCCCCCTTCC
T ss_pred cceEEEEEE--eCCeeEEEECCCCcccccCCccccCCHHHHHHHHHHHHHHhCC-CCCCCCCCcCC
Confidence 245654443 58899988877763 1122233355678999999999976 33344555433
No 5
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=96.78 E-value=0.0073 Score=58.16 Aligned_cols=65 Identities=14% Similarity=0.193 Sum_probs=47.9
Q ss_pred hhcCCccEEEEcC-CCCCCCHH-------HHHHHHHHHHcCCcEEEEecCCCCC--CCCccHHHHHHHhCcccCCc
Q psy15702 5 ELLRAASLFICTG-PREQFTIT-------ELNSLKTYLDEGGSLLIALGEEGER--GSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 5 ~ip~~advLVI~~-P~~~fs~~-------E~~~L~~fl~~GG~llv~~~~~~~~--~~~~nln~LL~~~Gi~~~~~ 70 (259)
++|++.|+||-+| -.+.||.. -+.+|++|+.+||.++..-++..-. ....-+. |..=+|+....+
T Consensus 496 e~L~d~DVIIn~G~A~TalSgg~~W~~p~~~~aLR~fV~~GGgLIgVGepSsfqg~g~gryFq-LADVLGVd~e~g 570 (759)
T 2zuv_A 496 GIDSDIDVIINGGPVDTAFTGGDVWTNPKLVETVRAWVRGGGAFVGVGEPSSAPRFQTGRFFQ-LADVIGVDEERY 570 (759)
T ss_dssp CCCTTCCEEEEEECTTSTTTCGGGGGCHHHHHHHHHHHHTTCEEEEEESTTEEEEEETTEEET-THHHHSEEECCS
T ss_pred cccccCCEEEecCcchhcccCccccCCHHHHHHHHHHHHcCCcEEEeCCccccccccCccccc-HHhhcCcccccC
Confidence 6799999999888 44567776 7999999999999998887774211 1223333 777789988764
No 6
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=94.14 E-value=0.04 Score=47.11 Aligned_cols=42 Identities=17% Similarity=0.313 Sum_probs=35.3
Q ss_pred CChhhcCCccEEEEcC--CCCCCCHHHHHHHHHHHHcCCcEEEE
Q psy15702 2 ITPELLRAASLFICTG--PREQFTITELNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 2 lt~~ip~~advLVI~~--P~~~fs~~E~~~L~~fl~~GG~llv~ 43 (259)
++.+.++++|+||+.+ ....++++..++|++|+++||.++.+
T Consensus 60 ~~~~~L~~~DvvV~~~~~~~~~l~~~~~~al~~~V~~GgG~vgi 103 (252)
T 1t0b_A 60 LTDEVLDRCDVLVWWGHIAHDEVKDEVVERVHRRVLEGMGLIVL 103 (252)
T ss_dssp CCHHHHHTCSEEEEECSSCGGGSCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHhHHhcCCEEEEecCCCCCcCCHHHHHHHHHHHHcCCCEEEE
Confidence 4567899999999852 23358999999999999999999888
No 7
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=82.52 E-value=1.1 Score=43.39 Aligned_cols=40 Identities=10% Similarity=0.119 Sum_probs=33.9
Q ss_pred hcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 6 LLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
-++++++||+.+-. -++++..++|++|+++||+|++..-.
T Consensus 449 dL~~Yklvv~P~~~-~~~~~~~~~L~~yV~~GG~lv~t~~s 488 (675)
T 3tty_A 449 DLSKYKVVIAPVMY-MVKPGFAERVERFVAQGGTFVTTFFS 488 (675)
T ss_dssp CCTTCSEEEETTCC-BCCTTHHHHHHHHHHTTCEEEEETTC
T ss_pred CcccCCEEEEeccE-ecCHHHHHHHHHHHhcCCEEEEEccC
Confidence 46789999888776 48999999999999999999987433
No 8
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=74.49 E-value=7.3 Score=29.66 Aligned_cols=57 Identities=4% Similarity=-0.010 Sum_probs=43.6
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
.++|+.+|++||+-|. +.-.+.+++-++.|-+.+++. ++. ....+-..++++|+.+-
T Consensus 72 ~~l~~~vDlvvi~vp~----~~~~~vv~~~~~~gi~~i~~~-~g~---~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 72 LDIPDKIEVVDLFVKP----KLTMEYVEQAIKKGAKVVWFQ-YNT---YNREASKKADEAGLIIV 128 (144)
T ss_dssp GGCSSCCSEEEECSCH----HHHHHHHHHHHHHTCSEEEEC-TTC---CCHHHHHHHHHTTCEEE
T ss_pred HHcCCCCCEEEEEeCH----HHHHHHHHHHHHcCCCEEEEC-CCc---hHHHHHHHHHHcCCEEE
Confidence 4678899999999885 566777888888998877654 333 25678888999999864
No 9
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=72.47 E-value=4.5 Score=30.21 Aligned_cols=56 Identities=11% Similarity=0.056 Sum_probs=42.8
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCC
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~ 69 (259)
++|+ .|+++|+-|. +.-.+.+++-.+.|=+.+| +.++.+ ...+-..++++||++-.
T Consensus 55 dlp~-vDlavi~~p~----~~v~~~v~e~~~~g~k~v~-~~~G~~---~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 55 VIEG-VDTVTLYINP----QNQLSEYNYILSLKPKRVI-FNPGTE---NEELEEILSENGIEPVI 110 (122)
T ss_dssp CCTT-CCEEEECSCH----HHHGGGHHHHHHHCCSEEE-ECTTCC---CHHHHHHHHHTTCEEEE
T ss_pred HCCC-CCEEEEEeCH----HHHHHHHHHHHhcCCCEEE-ECCCCC---hHHHHHHHHHcCCeEEC
Confidence 6788 9999999884 4556778888888988765 455543 46788999999998743
No 10
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=67.97 E-value=10 Score=29.17 Aligned_cols=62 Identities=11% Similarity=0.090 Sum_probs=37.6
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHH--cCCcEEEEecCCC-CCCCCccHHHHHHHhCcccCC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLD--EGGSLLIALGEEG-ERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~--~GG~llv~~~~~~-~~~~~~nln~LL~~~Gi~~~~ 69 (259)
.++|.+||+.|+..-...+..-++++.. -.|+.+.+++..+ .......++.+|++.|+.+-.
T Consensus 50 ~~~d~ii~Gspty~g~~p~~~fl~~l~~~~l~gk~v~~fgs~g~~g~a~~~l~~~l~~~G~~~v~ 114 (161)
T 3hly_A 50 SSARGIVLGTPPSQPSEAVATALSTIFAAAHNKQAIGLFDSYGGDDEPIDALLAQFRNLGLHTAF 114 (161)
T ss_dssp HHCSEEEEECCBSSCCHHHHHHHHHHHHHCCTTSEEEEECCCCSSBCCHHHHHHHHHHTTCEESS
T ss_pred HhCCEEEEEcCCcCCchhHHHHHHHHHhhhhCCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEEec
Confidence 4689999999986433333333433332 2455555444433 222346788999999998753
No 11
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=64.16 E-value=17 Score=27.34 Aligned_cols=56 Identities=23% Similarity=0.234 Sum_probs=40.7
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
.++|+.+|++||+-|. +.-.+.+++-++.|=+.+++.. .. ....+...+++.|+.+
T Consensus 64 ~el~~~vDlvii~vp~----~~v~~v~~~~~~~g~~~i~~~~-~~---~~~~l~~~a~~~Gi~~ 119 (138)
T 1y81_A 64 RELPKDVDVIVFVVPP----KVGLQVAKEAVEAGFKKLWFQP-GA---ESEEIRRFLEKAGVEY 119 (138)
T ss_dssp GGSCTTCCEEEECSCH----HHHHHHHHHHHHTTCCEEEECT-TS---CCHHHHHHHHHHTCEE
T ss_pred HHhCCCCCEEEEEeCH----HHHHHHHHHHHHcCCCEEEEcC-cc---HHHHHHHHHHHCCCEE
Confidence 3678899999999882 5556667777777766655533 32 2567888899999986
No 12
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=58.90 E-value=10 Score=28.71 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=40.7
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
.++|+.+|++||+-|. +.-.+.+++-++.|=+.+++.... ....+-.+++++|+++
T Consensus 65 ~el~~~vDlavi~vp~----~~~~~v~~~~~~~gi~~i~~~~g~----~~~~~~~~a~~~Gir~ 120 (140)
T 1iuk_A 65 LDLKEPVDILDVFRPP----SALMDHLPEVLALRPGLVWLQSGI----RHPEFEKALKEAGIPV 120 (140)
T ss_dssp GGCCSCCSEEEECSCH----HHHTTTHHHHHHHCCSCEEECTTC----CCHHHHHHHHHTTCCE
T ss_pred HHCCCCCCEEEEEeCH----HHHHHHHHHHHHcCCCEEEEcCCc----CHHHHHHHHHHcCCEE
Confidence 4678899999999884 444556677777887766654333 2467888899999985
No 13
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=55.97 E-value=5.7 Score=30.29 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=39.9
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
...|++++..+-.. ..-++.+.+.|+.||++++..-... ....+..+++++|..+.
T Consensus 93 ~~~D~i~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA--PGVFAAAWKRLPVGGRLVANAVTVE---SEQMLWALRKQFGGTIS 148 (178)
T ss_dssp SCCSEEEECC-TTC--TTHHHHHHHTCCTTCEEEEEECSHH---HHHHHHHHHHHHCCEEE
T ss_pred CCCCEEEECCcccH--HHHHHHHHHhcCCCCEEEEEeeccc---cHHHHHHHHHHcCCeeE
Confidence 57899988877653 5668889999999999887543321 23467788888886664
No 14
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=55.19 E-value=10 Score=31.46 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=36.9
Q ss_pred cCCccEEEEcCCCCCCCHHH--HHHHHHHHHcCCcEEEEecCCC-----C-CCCCccHHHHHHHhCcccCC
Q psy15702 7 LRAASLFICTGPREQFTITE--LNSLKTYLDEGGSLLIALGEEG-----E-RGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E--~~~L~~fl~~GG~llv~~~~~~-----~-~~~~~nln~LL~~~Gi~~~~ 69 (259)
.+.+|+++.-.+.. ...+ ...+.++|+.||++++.+-+.. . .....+....|++.|+++..
T Consensus 144 ~~~~D~I~~d~a~~--~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~ 212 (232)
T 3id6_C 144 VENVDVLYVDIAQP--DQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQ 212 (232)
T ss_dssp CCCEEEEEECCCCT--THHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEE
T ss_pred ccceEEEEecCCCh--hHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 46789888776652 2222 3345669999999998864432 1 01224456777888876643
No 15
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=53.97 E-value=6.5 Score=28.79 Aligned_cols=63 Identities=11% Similarity=-0.045 Sum_probs=36.1
Q ss_pred hcCCccEEEEcCCCCCCC--HH-HHHHHHHHHH---cCCcEEEEecCCCC-CCCCccHHHHHHHhCcccC
Q psy15702 6 LLRAASLFICTGPREQFT--IT-ELNSLKTYLD---EGGSLLIALGEEGE-RGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs--~~-E~~~L~~fl~---~GG~llv~~~~~~~-~~~~~nln~LL~~~Gi~~~ 68 (259)
-+.++|.+||+.|..... +. +++..-+.+. +|-++.++...+.. ......+..+|+..|..+-
T Consensus 43 ~l~~~d~vi~g~p~y~~~~~~~~~~~~fl~~l~~~l~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~ 112 (137)
T 2fz5_A 43 DVASKDVILLGCPAMGSEELEDSVVEPFFTDLAPKLKGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVI 112 (137)
T ss_dssp HHHTCSEEEEECCCBTTTBCCHHHHHHHHHHHGGGCSSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEE
T ss_pred HHhcCCEEEEEccccCCCCCCHHHHHHHHHHhhhhcCCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEc
Confidence 356899999999984322 23 2444444442 34444444433221 1234567788888898876
No 16
>2lfw_B NEPR anti sigma factor; signal transduction, response regulator, sigma factor mimicr sigma factor, general stress response, signaling protein; NMR {Sphingomonas SP}
Probab=50.62 E-value=4.6 Score=26.50 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=27.4
Q ss_pred HHHHHhhccccccc--cccCCchhHHhhccccccccCCCCC
Q psy15702 216 IRYTAAQLKSTLME--FQEVLDDYTRFFSLDLSKVDMSTVP 254 (259)
Q Consensus 216 ~~~~a~~~~~c~~~--~~~~~~d~~~~~~~~~~~~~~~~~~ 254 (259)
...++++||...++ .|.+|.+|.+|++ +++-...|
T Consensus 25 ~~~Ig~~LR~~Yd~vv~E~VPDrFldLL~----qLd~~~~~ 61 (62)
T 2lfw_B 25 DRDMGAALRSAYQKTIEEQVPDEMLDLLN----KLALELVP 61 (62)
T ss_dssp STTHHHHHHHHHHTTTSSCCCCTTGGGST----TTTSCCCC
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHH----HHHhccCC
Confidence 46789999998887 5799999999987 45555554
No 17
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=50.34 E-value=29 Score=26.55 Aligned_cols=61 Identities=8% Similarity=0.066 Sum_probs=35.9
Q ss_pred CCccEEEEcCCCCCCCHHH-HHHHHHHHH--cCCcEEEEecCCC-CCCCCccHHHHHHHhCcccCC
Q psy15702 8 RAASLFICTGPREQFTITE-LNSLKTYLD--EGGSLLIALGEEG-ERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E-~~~L~~fl~--~GG~llv~~~~~~-~~~~~~nln~LL~~~Gi~~~~ 69 (259)
.++|.+||+.|+.. ..-. ...++.+.. -.|+.+.+++.++ .......+...|++.|+.+-.
T Consensus 55 ~~~d~ii~Gspty~-g~~p~~~~l~~l~~~~~~~k~va~fgs~g~~~~a~~~l~~~l~~~G~~~v~ 119 (159)
T 3fni_A 55 GRCTGLVIGMSPAA-SAASIQGALSTILGSVNEKQAVGIFETGGGDDEPIDPLLSKFRNLGLTTAF 119 (159)
T ss_dssp HTEEEEEEECCBTT-SHHHHHHHHHHHHHHCCTTSEEEEECCSSSCBCCHHHHHHHHHHTTCEESS
T ss_pred HhCCEEEEEcCcCC-CCccHHHHHHHHHhhcccCCEEEEEEcCCCCcHHHHHHHHHHHHCCCEEec
Confidence 46999999999863 3322 122222222 1455555555433 222346788999999988754
No 18
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=49.07 E-value=17 Score=31.71 Aligned_cols=38 Identities=11% Similarity=0.108 Sum_probs=31.0
Q ss_pred hcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 6 LLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
+|+.+|++++..--..+++++ +..+.+.|+.||++++.
T Consensus 245 ~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 245 FPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp CCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 677899999988777788876 56677788999998885
No 19
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=48.57 E-value=12 Score=28.55 Aligned_cols=60 Identities=15% Similarity=0.212 Sum_probs=39.3
Q ss_pred CCccEEEEcCCCCC-CCH----HHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQ-FTI----TELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~-fs~----~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++..++.-. ++. .-+..+.+.|+.||.+++....... .....+..++++.|.++.
T Consensus 106 ~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l~~~Gf~~~ 170 (195)
T 3cgg_A 106 TDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVAERVGLELE 170 (195)
T ss_dssp CCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHHHHHTEEEE
T ss_pred CceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHHHHcCCEEe
Confidence 46788877644322 332 3367778888999999887655421 124567788888898763
No 20
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=48.54 E-value=11 Score=27.70 Aligned_cols=64 Identities=11% Similarity=0.024 Sum_probs=39.3
Q ss_pred hcCCccEEEEcCCCCCCC--HH-HHHHHHHHHH---cCCcEEEEecCCCC-CCCCccHHHHHHHhCcccCC
Q psy15702 6 LLRAASLFICTGPREQFT--IT-ELNSLKTYLD---EGGSLLIALGEEGE-RGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs--~~-E~~~L~~fl~---~GG~llv~~~~~~~-~~~~~nln~LL~~~Gi~~~~ 69 (259)
-+.++|.+||+.|+.... ++ .+...-+.+. +|-++.++...+.. ......+...|++.|..+-.
T Consensus 42 ~l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~ 112 (138)
T 5nul_A 42 ELLNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVE 112 (138)
T ss_dssp HHTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECS
T ss_pred HHhhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEEC
Confidence 357899999999985432 22 4555555554 45555555433221 12346788899999998753
No 21
>2ko4_B General control protein GCN4; GAL11, mediator, activator, CO-activator, MED15, trans nucleus, phosphoprotein, transcription regulation; NMR {Saccharomyces cerevisiae} PDB: 2lpb_B
Probab=47.39 E-value=5.3 Score=22.69 Aligned_cols=14 Identities=21% Similarity=0.525 Sum_probs=11.3
Q ss_pred cCCchhHHhhcccc
Q psy15702 232 EVLDDYTRFFSLDL 245 (259)
Q Consensus 232 ~~~~d~~~~~~~~~ 245 (259)
.-|+.||.|||.++
T Consensus 15 ~~~~~WtSLFDdDI 28 (34)
T 2ko4_B 15 DNSKEWTSLFDNDI 28 (34)
T ss_dssp CSSGGGTTTTSCCC
T ss_pred CCcchhhhhccCCc
Confidence 34999999999765
No 22
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=47.30 E-value=12 Score=29.49 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=39.4
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcc
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVS 66 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~ 66 (259)
...|++++.++.. -.+.-++.+.+.|+.||++++...... ....+..++++.|..
T Consensus 107 ~~~D~i~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 107 PDPDRVFIGGSGG-MLEEIIDAVDRRLKSEGVIVLNAVTLD---TLTKAVEFLEDHGYM 161 (204)
T ss_dssp CCCSEEEESCCTT-CHHHHHHHHHHHCCTTCEEEEEECBHH---HHHHHHHHHHHTTCE
T ss_pred CCCCEEEECCCCc-CHHHHHHHHHHhcCCCeEEEEEecccc---cHHHHHHHHHHCCCc
Confidence 5689888877654 345568889999999999888644321 234567788899963
No 23
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=44.43 E-value=30 Score=26.12 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=38.2
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
.++|+.+|++||+-|. +.-.+.+++-++.|=+.+++ .++. ....+-..++++|+.+-
T Consensus 65 ~el~~~~Dlvii~vp~----~~v~~v~~~~~~~g~~~i~i-~~~~---~~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 65 ADVPEKVDMVDVFRNS----EAAWGVAQEAIAIGAKTLWL-QLGV---INEQAAVLAREAGLSVV 121 (145)
T ss_dssp TTCSSCCSEEECCSCS----THHHHHHHHHHHHTCCEEEC-CTTC---CCHHHHHHHHTTTCEEE
T ss_pred HHcCCCCCEEEEEeCH----HHHHHHHHHHHHcCCCEEEE-cCCh---HHHHHHHHHHHcCCEEE
Confidence 3678899999999883 33445556666667444333 3332 25678888999999864
No 24
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=43.54 E-value=7.2 Score=30.66 Aligned_cols=62 Identities=16% Similarity=0.311 Sum_probs=37.4
Q ss_pred hcCCccEEEEcCCCCCCCHHHHHHHHHHHHc------CCcEEEEecCCCCC--CCCccHHHHHHHhCcccCCc
Q psy15702 6 LLRAASLFICTGPREQFTITELNSLKTYLDE------GGSLLIALGEEGER--GSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E~~~L~~fl~~------GG~llv~~~~~~~~--~~~~nln~LL~~~Gi~~~~~ 70 (259)
-..+||.+||+.|..-++-. ..++.|+++ |-+++++ ..++.. .....+..+++.+|+.+-..
T Consensus 81 ~l~~aD~iI~~sP~y~~~~p--~~lK~~iD~~~~~l~gK~~~~~-~~G~~~~~~~~~~l~~~l~~~G~~~~~~ 150 (191)
T 1t0i_A 81 IVNALDIIVFVTPQYNWGYP--AALKNAIDRLYHEWHGKPALVV-SYGGHGGSKCNDQLQEVLHGLKMNVIGG 150 (191)
T ss_dssp HHHTCSEEEEEEECBTTBCC--HHHHHHHHTCSTTTTTCEEEEE-EEETTTTHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhCCEEEEEeceECCCCC--HHHHHHHHHHHhhcCCCEEEEE-EeCCcchhhHHHHHHHHHHHCCCEEcce
Confidence 45689999999998654432 345555543 4444444 333211 12245778888899987653
No 25
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=43.02 E-value=7 Score=29.93 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=39.3
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++..++-.. ...-+..+.+.|+.||.+++...... ....+..++++.|..+.
T Consensus 99 ~~~D~v~~~~~~~~-~~~~l~~~~~~l~~gG~l~~~~~~~~---~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 99 PDIDIAVVGGSGGE-LQEILRIIKDKLKPGGRIIVTAILLE---TKFEAMECLRDLGFDVN 155 (192)
T ss_dssp CCEEEEEESCCTTC-HHHHHHHHHHTEEEEEEEEEEECBHH---HHHHHHHHHHHTTCCCE
T ss_pred CCCCEEEECCchHH-HHHHHHHHHHhcCCCcEEEEEecCcc---hHHHHHHHHHHCCCceE
Confidence 46898888877443 35668888888999999887643321 23456678888887543
No 26
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=42.25 E-value=13 Score=29.06 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=37.0
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHH-----------cCCcEEEEecCCCCC----CCCccHHHHHHHhCcccCC
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLD-----------EGGSLLIALGEEGER----GSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~-----------~GG~llv~~~~~~~~----~~~~nln~LL~~~Gi~~~~ 69 (259)
+-..++|.+||+.|....+- -..++.|++ +|.++.++...++.. .....+..+|+.+|+.+-.
T Consensus 67 ~~l~~aD~ii~gsP~y~~~~--~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~~~ 144 (200)
T 2a5l_A 67 EDLKNCAGLALGSPTRFGNM--ASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLG 144 (200)
T ss_dssp HHHHTCSEEEEEEECBTTBC--CHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSCSSCCHHHHHHHHHHHHHHTTCEECC
T ss_pred HHHHHCCEEEEEcChhccCc--cHHHHHHHHHHHHHhhccccCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHCCCEEEC
Confidence 34568999999999854332 223444443 344455454443221 0123466777788988765
Q ss_pred ce
Q psy15702 70 DC 71 (259)
Q Consensus 70 ~~ 71 (259)
..
T Consensus 145 ~~ 146 (200)
T 2a5l_A 145 IP 146 (200)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 27
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=41.98 E-value=21 Score=28.31 Aligned_cols=56 Identities=14% Similarity=0.060 Sum_probs=38.0
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~ 69 (259)
+..|++++.+. +...-++.+.+.|+.||++++..-... ....+..+++++|.++..
T Consensus 121 ~~~D~v~~~~~---~~~~~l~~~~~~LkpgG~lv~~~~~~~---~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 121 PLPEAVFIGGG---GSQALYDRLWEWLAPGTRIVANAVTLE---SETLLTQLHARHGGQLLR 176 (204)
T ss_dssp CCCSEEEECSC---CCHHHHHHHHHHSCTTCEEEEEECSHH---HHHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEECCc---ccHHHHHHHHHhcCCCcEEEEEecCcc---cHHHHHHHHHhCCCcEEE
Confidence 36898887663 233367888889999999887644321 234566788888966543
No 28
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=41.25 E-value=23 Score=27.96 Aligned_cols=57 Identities=18% Similarity=0.147 Sum_probs=38.7
Q ss_pred CCccEEEEcCCCCC----------CCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQ----------FTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~----------fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
...|++++..|... ..+.-+..+.+.|+.||.+++..+... ....+-.++++.|..+
T Consensus 110 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~~~~~g~~~ 176 (214)
T 1yzh_A 110 GEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRG---LFEYSLVSFSQYGMKL 176 (214)
T ss_dssp TCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHH---HHHHHHHHHHHHTCEE
T ss_pred CCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHH---HHHHHHHHHHHCCCee
Confidence 35798888877421 235668889999999999988765421 1234456677778654
No 29
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=40.49 E-value=7.6 Score=31.17 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 25 TELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 25 ~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
.-++.+.+.|+.||.+++.+....+ ....+..++++.|..+.
T Consensus 160 ~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 160 KLLEEAFDHLNPGGKVALYLPDKEK--LLNVIKERGIKLGYSVK 201 (230)
T ss_dssp HHHHHHGGGEEEEEEEEEEEESCHH--HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCeEEEEEecccHh--HHHHHHHHHHHcCCceE
Confidence 3366677788899999987654321 23456778888898663
No 30
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=40.30 E-value=23 Score=30.47 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=29.4
Q ss_pred hcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 6 LLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
.++.+|++++..--..+++.+ +..+.+.|+.||++++.
T Consensus 245 ~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 245 EGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp TTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 567799999988777788753 55666777899998886
No 31
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=40.27 E-value=20 Score=30.56 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=42.3
Q ss_pred hhcC--CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 5 ELLR--AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 5 ~ip~--~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
++|+ ++|++||+-|. +.-.+.+++-++.|=++++.+.++-.......+....++.|+.+
T Consensus 58 el~~~~~~D~viI~tP~----~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 58 EAVAATGATASVIYVPA----PFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp HHHHHHCCCEEEECCCG----GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHhhcCCCCEEEEecCH----HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 4666 89999999995 45678888899999998776665432101225677788899865
No 32
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=39.61 E-value=20 Score=31.75 Aligned_cols=64 Identities=11% Similarity=0.044 Sum_probs=36.3
Q ss_pred hcCCccEEEEcCCCCCCCHH-HHHHHHHHHH-----cCCcEEEEecCCCCCCCCccHHHHHHH-hCcccCC
Q psy15702 6 LLRAASLFICTGPREQFTIT-ELNSLKTYLD-----EGGSLLIALGEEGERGSSTNINFLLEQ-YGVSVNS 69 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~-E~~~L~~fl~-----~GG~llv~~~~~~~~~~~~nln~LL~~-~Gi~~~~ 69 (259)
-..++|.+||+.|....+.. .++..-+++. +|-++.++...++.......+..+|+. +|..+-.
T Consensus 304 ~l~~~D~iiigsP~y~~~~~~~~k~fld~l~~~~~~~~K~~~~~~t~g~~~~a~~~l~~~l~~~~g~~~~~ 374 (414)
T 2q9u_A 304 HTYDSGAVAFASPTLNNTMMPSVAAALNYVRGLTLIKGKPAFAFGAFGWSNRAVPDIVAELRDGCKADVYD 374 (414)
T ss_dssp HHHTCSEEEEECCCBTTBCCHHHHHHHHHHHHHTTTTTSBEEEEEEESSSCCHHHHHHHHHHHTSCCBCCC
T ss_pred HHHhCCEEEEEcCccCcCchHHHHHHHHHHHhhcccCCCEEEEEEecCCCchhHHHHHHHHHhhcCcEEcc
Confidence 35689999999998544332 2333333322 344444444333221123567788888 8988654
No 33
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=38.99 E-value=23 Score=30.18 Aligned_cols=39 Identities=8% Similarity=0.229 Sum_probs=30.8
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..|+.+|++++...-..+++.+ ++.+.+.|+.||++++.
T Consensus 229 ~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 229 EVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp CCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3567799999888877777765 66777788899998887
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=38.78 E-value=21 Score=27.99 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=42.7
Q ss_pred cCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEecCCCCC-----------CCCccHHHHHHHhC-cccC
Q psy15702 7 LRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIALGEEGER-----------GSSTNINFLLEQYG-VSVN 68 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~~~~~~~-----------~~~~nln~LL~~~G-i~~~ 68 (259)
....|+++....-..+..++ +..+.+.|+.||.+++........ -....+..+|++.| +++.
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 35688888877665566433 678888899999998876554311 12346778888889 7764
No 35
>3hjh_A Transcription-repair-coupling factor; MFD, mutation frequency decline, ATP-binding, DNA DAMA repair, DNA-binding, helicase, hydrolase; 1.95A {Escherichia coli} PDB: 2b2n_A* 4dfc_A
Probab=38.03 E-value=32 Score=31.79 Aligned_cols=38 Identities=21% Similarity=0.482 Sum_probs=31.2
Q ss_pred HHHHHHHHH-cCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 27 LNSLKTYLD-EGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 27 ~~~L~~fl~-~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
++.|++|++ .|++++++.+..+ ....+..+|+++||..
T Consensus 371 ~~~L~~~~~~~~~rVvi~a~s~~---r~erL~~~L~~~~i~~ 409 (483)
T 3hjh_A 371 LDALRKFLETFDGPVVFSVESEG---RREALGELLARIKIAP 409 (483)
T ss_dssp THHHHHHHHHCCSCEEEEESCSS---TTTTTHHHHGGGTCCC
T ss_pred HHHHHHHHHhCCCeEEEEeCChH---HHHHHHHHHHHcCCCc
Confidence 688999995 5899999887765 4577999999999863
No 36
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=37.71 E-value=13 Score=29.59 Aligned_cols=63 Identities=11% Similarity=0.209 Sum_probs=35.3
Q ss_pred hcCCccEEEEcCCCCCCCHHHHHHHHHHHHc-----------CCcEEEEecCCCCC-CC---CccHHHHHHHhCcccCCc
Q psy15702 6 LLRAASLFICTGPREQFTITELNSLKTYLDE-----------GGSLLIALGEEGER-GS---STNINFLLEQYGVSVNSD 70 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E~~~L~~fl~~-----------GG~llv~~~~~~~~-~~---~~nln~LL~~~Gi~~~~~ 70 (259)
-+.++|.+||+.|..-++-. ..++.|+++ |.++.++...++.. .. ...+..++..+|+.+-..
T Consensus 75 ~l~~aD~ii~gsP~y~~~~~--~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~~~~~~~~~l~~~l~~~g~~~v~~ 152 (211)
T 1ydg_A 75 DLEWAEAIVFSSPTRFGGAT--SQMRAFIDTLGGLWSSGKLANKTFSAMTSAQNVNGGQETTLQTLYMTAMHWGAVLTPP 152 (211)
T ss_dssp HHHHCSEEEEEEEEETTEEC--HHHHHHHHTTHHHHHTTTTTTCEEEEEEEESSTTSSTTHHHHHHHHHHHTTTCEECCC
T ss_pred HHHHCCEEEEEcCccccCcc--HHHHHHHHHhccccccccCCCCEEEEEEeCCCCCCChHHHHHHHHHHHHHCCCEEeCC
Confidence 35679999999998543321 224445543 44444443333211 11 135677888889877543
No 37
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=37.59 E-value=12 Score=32.89 Aligned_cols=61 Identities=15% Similarity=0.026 Sum_probs=35.9
Q ss_pred cCCccEEEEcCCCCCCCHHHHHHHHHHHH-------cCCcEEEEecCCCCCCCCccHHHHHHHhCcccCC
Q psy15702 7 LRAASLFICTGPREQFTITELNSLKTYLD-------EGGSLLIALGEEGERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E~~~L~~fl~-------~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~ 69 (259)
+.++|++||+.|...... ...++.|++ +|..+.++...++.......+...|++.|..+-.
T Consensus 301 ~~~~d~ii~gsp~~~~~~--~~~~~~~l~~l~~~~l~~k~~~~f~t~g~~~~a~~~l~~~l~~~G~~~~~ 368 (402)
T 1e5d_A 301 ISDAGAVIVGSPTHNNGI--LPYVAGTLQYIKGLRPQNKIGGAFGSFGWSGESTKVLAEWLTGMGFDMPA 368 (402)
T ss_dssp HHTCSEEEEECCCBTTBC--CHHHHHHHHHHHHTCCCSCEEEEEEEESSSCHHHHHHHHHHHHTTCBCCS
T ss_pred HHHCCEEEEECCccCCCc--hHHHHHHHHHhhhcccCCCEEEEEEcCCCccHHHHHHHHHHHHCCCEEec
Confidence 468999999999743222 113444443 2444555544332222345688889999988764
No 38
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=37.11 E-value=21 Score=29.35 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=29.0
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 26 ELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 26 E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
=+..+.+.|+.||++++...+.. ...+..+++++|+...
T Consensus 158 ~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 158 TIRVAASLLKQGGKANFVHRPER----LLDIIDIMRKYRLEPK 196 (259)
T ss_dssp HHHHHHHHEEEEEEEEEEECTTT----HHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHccCCcEEEEEEcHHH----HHHHHHHHHHCCCceE
Confidence 46778888899999999776542 4557777888887664
No 39
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=36.81 E-value=26 Score=29.96 Aligned_cols=60 Identities=17% Similarity=0.174 Sum_probs=42.1
Q ss_pred hhcC--CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 5 ELLR--AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 5 ~ip~--~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
++|+ ++|++||+-| .+.-.+.+++-++.|=+.++....+-.......+....+++|+.+-
T Consensus 64 el~~~~~~Dv~ii~vp----~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 64 EAVKETDANASVIFVP----APFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp HHHHHHCCCEEEECCC----HHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHhhcCCCCEEEEccC----HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4677 8999999988 4566788888999999966655544211112357777888998653
No 40
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=36.79 E-value=25 Score=27.33 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=41.1
Q ss_pred CCccEEEEcCCCCCCC----HHHHHHHHHHHHcCCcEEEEecCCCC------------CCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFT----ITELNSLKTYLDEGGSLLIALGEEGE------------RGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs----~~E~~~L~~fl~~GG~llv~~~~~~~------------~~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++....-.-++ ..-+..+.+.|+.||.+++..-.... ......+..+|++.|+++.
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 177 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVT 177 (203)
T ss_dssp CCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEE
T ss_pred CCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEE
Confidence 5689888877655554 34478888889999998886533211 0123567788888887764
No 41
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=35.24 E-value=33 Score=28.87 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=21.9
Q ss_pred CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 9 AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 9 ~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
..+++|++||.--||++|++.+.+ .|- .-+-+++
T Consensus 190 ~~~v~l~IGPEGGfs~~Ei~~~~~---~Gf-~~vsLG~ 223 (257)
T 3kw2_A 190 GQDVLILIGPEGDFSPSEVESALL---AGF-APVSLGE 223 (257)
T ss_dssp TSCEEEEECCTTCCCHHHHHHHHH---HTC-EEECCCS
T ss_pred CCcEEEEECCCCCCCHHHHHHHHH---CCC-EEEcCCC
Confidence 356777788888888888777655 233 3444454
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=35.00 E-value=37 Score=27.02 Aligned_cols=61 Identities=11% Similarity=-0.001 Sum_probs=40.6
Q ss_pred CCccEEEEcCCCCCCCH----HHHHHHHHHHHcCCcEEEEecCCCCC-------CCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFTI----TELNSLKTYLDEGGSLLIALGEEGER-------GSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~----~E~~~L~~fl~~GG~llv~~~~~~~~-------~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++....-..+.+ .-+..+.+.|+.||.+++..-+.... .....+..+|++.|.++.
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 202 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAV 202 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEE
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEE
Confidence 46888887776655552 33788888999999988765432210 122467788888887763
No 43
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=34.67 E-value=33 Score=27.34 Aligned_cols=67 Identities=22% Similarity=0.186 Sum_probs=39.3
Q ss_pred hcCCccEEEEcCCCCCCCHH-HHHHHHHHHH----cCCcEEEEecCCCCCCCC----ccHHHHHHHhCcccCCceee
Q psy15702 6 LLRAASLFICTGPREQFTIT-ELNSLKTYLD----EGGSLLIALGEEGERGSS----TNINFLLEQYGVSVNSDCVV 73 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~-E~~~L~~fl~----~GG~llv~~~~~~~~~~~----~nln~LL~~~Gi~~~~~~V~ 73 (259)
-...||.+||+.|...++-. .++..-+++. +|-.+.++.. ++..... ..+..+|..+|+.+-+..|.
T Consensus 82 ~i~~AD~ivi~sP~Y~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t-~G~~~~~~~~~~~L~~il~~lg~~vv~~~v~ 157 (191)
T 3k1y_A 82 ALSASDGLVVATPVFKASYTGLFKMFFDILDTDALTGMPTIIAAT-AGSARHSLVLDYALRPLLSYMRAVVVPTGVF 157 (191)
T ss_dssp HHHHCSEEEEEEECBTTBSCHHHHHHHHHSCTTTTTTCEEEEEEE-ESSSTTTTHHHHTHHHHHHHTTCEECSCCEE
T ss_pred HHHHCCEEEEEcCccCCcCcHHHHHHHHHhhhhhcCCCEEEEEEe-CCCcchhhHHHHHHHHHHHHCCCEEcCcEEE
Confidence 34679999999998655543 3444444443 3333444333 3221122 23888999999997655433
No 44
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=34.45 E-value=48 Score=27.65 Aligned_cols=61 Identities=11% Similarity=0.081 Sum_probs=38.9
Q ss_pred CCccEEEEcCCCCCC--CHHHHHHHHHHHH---c--CCcEEEEecCCCCC--CCCccHHHHHHHhC-cccC
Q psy15702 8 RAASLFICTGPREQF--TITELNSLKTYLD---E--GGSLLIALGEEGER--GSSTNINFLLEQYG-VSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~f--s~~E~~~L~~fl~---~--GG~llv~~~~~~~~--~~~~nln~LL~~~G-i~~~ 68 (259)
...|++|....-... -+.-+..+.+.|+ . ||.+++...+.... .....+-..+++.| +.+.
T Consensus 162 ~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 162 QRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAE 232 (281)
T ss_dssp SSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEE
T ss_pred CCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEE
Confidence 568988876664322 2344778888888 8 99998888875321 12345666788888 7664
No 45
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=33.57 E-value=56 Score=25.66 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=41.7
Q ss_pred hcCCccEEEEcCCCCCCCHH-HHHHHHHHHHc--------------CCcEEEEecCCC--CCCCCccHHHHHHHhCcccC
Q psy15702 6 LLRAASLFICTGPREQFTIT-ELNSLKTYLDE--------------GGSLLIALGEEG--ERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~-E~~~L~~fl~~--------------GG~llv~~~~~~--~~~~~~nln~LL~~~Gi~~~ 68 (259)
....||.+||+.|...++-. -++..-+++.. |-+++++...++ .......+..+|..+|+.+-
T Consensus 64 ~i~~AD~iV~~sP~y~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg~g~~~~~~~l~~~l~~~G~~~v 143 (192)
T 3fvw_A 64 EVQEADAIWIFSPVYNYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANGASPEEVFEDYRSLLPFIRMHLV 143 (192)
T ss_dssp HHHHCSEEEEECCCBTTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCCC---CCSHHHHHHHHHTTCEEC
T ss_pred HHHhCCEEEEECcccccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCCcchhHHHHHHHHHHHHcCCeee
Confidence 45689999999998655543 35555555542 223444433332 12245678999999999987
Q ss_pred Ccee
Q psy15702 69 SDCV 72 (259)
Q Consensus 69 ~~~V 72 (259)
+..+
T Consensus 144 ~~~v 147 (192)
T 3fvw_A 144 DQLT 147 (192)
T ss_dssp CCCE
T ss_pred ccee
Confidence 6544
No 46
>1v6z_A Hypothetical protein TTHA0657; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.00A {Thermus thermophilus HB8} SCOP: b.122.1.2 c.116.1.5 PDB: 2cx8_A* 2z0y_A*
Probab=33.48 E-value=34 Score=28.14 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=24.9
Q ss_pred ccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 10 ASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 10 advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
.+++|++||.--||++|++.+.+. |-.-+-+++
T Consensus 174 ~~~~l~IGPEGGfs~~Ei~~~~~~----G~~~vsLG~ 206 (228)
T 1v6z_A 174 KPLALAVGPEGGFAEEEVALLEAR----GFTPVSLGR 206 (228)
T ss_dssp SCEEEEECCTTCCCHHHHHHHHHH----TEEEECCCS
T ss_pred CcEEEEEcCCCCCCHHHHHHHHHC----CCEEecCCC
Confidence 478999999999999999888664 434444444
No 47
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=33.18 E-value=32 Score=26.76 Aligned_cols=64 Identities=16% Similarity=0.281 Sum_probs=36.4
Q ss_pred hcCCccEEEEcCCCCCCCHH-HHHHHHHHHH-----------------cCCcEEEEecCCCCCC------CCccHHHHHH
Q psy15702 6 LLRAASLFICTGPREQFTIT-ELNSLKTYLD-----------------EGGSLLIALGEEGERG------SSTNINFLLE 61 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~-E~~~L~~fl~-----------------~GG~llv~~~~~~~~~------~~~nln~LL~ 61 (259)
...+||++||+.|..-++-. .++..-+.+. +|-+++++...++... ....+..++.
T Consensus 83 ~l~~aD~iv~~~P~y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~~~~~~~~~~~~l~~~l~ 162 (201)
T 1t5b_A 83 ELKAHDVIVIAAPMYNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIHKDTPTDLIAPYLKVFLG 162 (201)
T ss_dssp HHHHCSEEEEECCCBTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCCTTSTTCCHHHHHHHHHH
T ss_pred HHHhCCEEEEEeCcccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCCCCCchhhHHHHHHHHHh
Confidence 45689999999998655432 3444434343 2334544443332110 1223677888
Q ss_pred HhCcccCC
Q psy15702 62 QYGVSVNS 69 (259)
Q Consensus 62 ~~Gi~~~~ 69 (259)
.+|+.+-.
T Consensus 163 ~~G~~~~~ 170 (201)
T 1t5b_A 163 FIGITDVN 170 (201)
T ss_dssp HTTCCCEE
T ss_pred hcCcceeE
Confidence 88988653
No 48
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=33.08 E-value=32 Score=29.45 Aligned_cols=41 Identities=20% Similarity=0.271 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 27 LNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 27 ~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
+..+.++|+.||.+++..-..........+..+|+++|+++
T Consensus 229 L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 229 LEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp HHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred HHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 56677788899999885433221112345788899988654
No 49
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=32.95 E-value=35 Score=28.28 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=21.3
Q ss_pred ccEEEEcCCCCCCCHHHHHHHHHH
Q psy15702 10 ASLFICTGPREQFTITELNSLKTY 33 (259)
Q Consensus 10 advLVI~~P~~~fs~~E~~~L~~f 33 (259)
.+++|++||.--||++|++.+.+.
T Consensus 180 ~~i~l~IGPEGGfs~~Ei~~~~~~ 203 (234)
T 1z85_A 180 GSITVVVGPEGGFSEKERELLRSS 203 (234)
T ss_dssp SSEEEEECCTTCCCHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCHHHHHHHHhh
Confidence 378999999999999999988774
No 50
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=32.47 E-value=34 Score=28.78 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=25.5
Q ss_pred ccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCC
Q psy15702 10 ASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEE 47 (259)
Q Consensus 10 advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~ 47 (259)
.+++|++||.--||++|++.+.+ . |=.-+-+++.
T Consensus 190 ~~i~l~IGPEGGfs~~Ei~~~~~---~-G~~~vsLG~r 223 (257)
T 1vhy_A 190 GGVRLLIGSEGGLSAQEIAQTEQ---Q-GFTEILLGKR 223 (257)
T ss_dssp TCEEEEECCTTCCCHHHHHHHHH---T-TCEEEBCCSS
T ss_pred CeEEEEEcCCCCCCHHHHHHHHH---C-CCEEecCCCC
Confidence 37899999999999999987755 3 4445555553
No 51
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=31.88 E-value=34 Score=28.20 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=23.8
Q ss_pred cEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 11 SLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 11 dvLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
+++|++||.--||++|++.+.+ .| -.-+-+++
T Consensus 179 ~i~l~IGPEGGfs~~Ei~~~~~---~G-~~~vsLG~ 210 (229)
T 2egv_A 179 TYSVVVGPEGGFSKRESQILRE---KG-FKSVLLEP 210 (229)
T ss_dssp EEEEEECCTTCCCHHHHHHHHH---TT-CEEECCSS
T ss_pred cEEEEEcCCCCCCHHHHHHHHH---CC-CEEecCCC
Confidence 7999999999999999987754 34 34444444
No 52
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=31.68 E-value=54 Score=28.26 Aligned_cols=37 Identities=16% Similarity=0.020 Sum_probs=27.2
Q ss_pred CCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEe
Q psy15702 8 RAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIAL 44 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~ 44 (259)
++.|++++...-..+++++ ++.+.+.|+.||++++.-
T Consensus 255 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3459999888777777744 566677778899987753
No 53
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=31.17 E-value=27 Score=27.24 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=35.3
Q ss_pred hcCCccEEEEcCCCCCCCHHHHHHHHHHHHc-----------CCcEEEEecCCCC---C-CCCccHHHHHHHhCcccCCc
Q psy15702 6 LLRAASLFICTGPREQFTITELNSLKTYLDE-----------GGSLLIALGEEGE---R-GSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E~~~L~~fl~~-----------GG~llv~~~~~~~---~-~~~~nln~LL~~~Gi~~~~~ 70 (259)
-..++|.+||+.|..-.+-. ..++.|+++ |.++.++...++. . .....+..+|+.+|+.+-..
T Consensus 67 ~l~~aD~ii~gsP~y~~~~~--~~lk~~ld~~~~~~~~~~l~gK~~~~~~t~g~~~~g~~~~~~~l~~~l~~~g~~~~~~ 144 (199)
T 2zki_A 67 DMRWADGFAIGSPTRYGNMA--GGLKTFLDTTAILWKDNVLYGKPVTFFTEASTVHGGHETTILTMSTYAYHFGMIIVPI 144 (199)
T ss_dssp HHHHCSEEEEEEECBTTBCC--HHHHHHHHTTHHHHHTTSSTTCEEEEEEEBSSTTSSSSHHHHHHTHHHHHHTCEECCC
T ss_pred HHHhCCEEEEECCccccCcc--HHHHHHHHHhhhcccccccCCCEEEEEEeCCCCCCCHHHHHHHHHHHHHHCCeEEeCC
Confidence 45679999999998543321 224444432 3344444433221 1 11235778888889887543
No 54
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=30.95 E-value=14 Score=32.53 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=36.2
Q ss_pred cCCccEEEEcCCCCCCCHH-HHHHHHHHHHc------CCcEEEEecCCC-CCCCCccHHHHHHHhCcccCC
Q psy15702 7 LRAASLFICTGPREQFTIT-ELNSLKTYLDE------GGSLLIALGEEG-ERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~-E~~~L~~fl~~------GG~llv~~~~~~-~~~~~~nln~LL~~~Gi~~~~ 69 (259)
..++|.+||+.|....+.. .++..-+++.+ .|+...++..++ .......+..+|+.+|+.+-.
T Consensus 305 l~~~d~iiigsP~y~~~~~~~~k~~ld~l~~~~~~~l~~k~~~~~~~~g~~~~a~~~l~~~l~~~g~~~~~ 375 (404)
T 2ohh_A 305 ILESGAIALGAPTIYDEPYPSVGDLLMYLRGLKFNRTLTRKALVFGSMGGNGGATGTMKELLAEAGFDVAC 375 (404)
T ss_dssp HHTCSEEEEECCEETTEECTHHHHHHHHHHHHCGGGTCCEEEEEEEEESSSCCHHHHHHHHHHHTTEEEEE
T ss_pred HHHCCEEEEECccccccchHHHHHHHHHhhhccccccCCCEEEEEEecCCCChhHHHHHHHHHHCCCEEEe
Confidence 5689999999997433322 33333333331 455444333322 112235688899999987654
No 55
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=30.06 E-value=40 Score=28.72 Aligned_cols=59 Identities=12% Similarity=0.038 Sum_probs=41.3
Q ss_pred hhcC--CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 5 ELLR--AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 5 ~ip~--~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
++|+ ++|++|+.-| .+.-.+.+++-++.|=+.++....+-.......+....++.|+.+
T Consensus 58 el~~~~~~Dv~Ii~vp----~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~v 118 (288)
T 1oi7_A 58 EAVAHHEVDASIIFVP----APAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRL 118 (288)
T ss_dssp HHHHHSCCSEEEECCC----HHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEE
T ss_pred HHhhcCCCCEEEEecC----HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 4667 8999999988 456678888888999886665555432111235777788899864
No 56
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=29.87 E-value=37 Score=28.68 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=25.2
Q ss_pred cEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCC
Q psy15702 11 SLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEE 47 (259)
Q Consensus 11 dvLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~ 47 (259)
+++|++||.--||++|++.+.+ . |=.-+-+++.
T Consensus 200 ~i~l~IGPEGGfs~~Ei~~~~~---~-G~~~vsLG~r 232 (268)
T 1vhk_A 200 SLLIVFGPEGGLTEAEVERLTE---Q-DGVTCGLGPR 232 (268)
T ss_dssp EEEEEECCTTCCCHHHHHHHHH---T-TCEEECCCSS
T ss_pred cEEEEEcCCCCCCHHHHHHHHH---C-CCEEecCCCC
Confidence 7899999999999999988755 3 4445555553
No 57
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=29.80 E-value=8.7 Score=32.39 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=45.4
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCCceee
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNSDCVV 73 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~~~V~ 73 (259)
++++.||+++|.|-+ +-...+..|.+.. +.++..++++|.. +-+..++..+|+..-.+.++
T Consensus 160 ~~l~~~D~v~iTGsT--lvN~Ti~~lL~~~-~~~~~vvl~GPS~-----~~~P~~~~~~Gv~~l~g~~v 220 (249)
T 3npg_A 160 HILPEVDGIIASASC--IVNGTLDMILDRA-KKAKLIVITGPTG-----QLLPEFLKGTKVTHLASMKV 220 (249)
T ss_dssp HHGGGCSEEEEETTH--HHHTCHHHHHHHC-SSCSEEEEESGGG-----CSCGGGGTTSSCCEEEEEEE
T ss_pred hhhccCCEEEEEeee--eccCCHHHHHHhC-cccCeEEEEecCc-----hhhHHHHhhCCccEEEEEEe
Confidence 478899999999885 4555556666655 4466788889974 34667888999998887766
No 58
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=29.80 E-value=21 Score=29.57 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=26.9
Q ss_pred cCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCC
Q psy15702 7 LRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEE 47 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~ 47 (259)
.+.+|+++.--+..+-.+.-+..+..+|+.||++++.....
T Consensus 145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred cceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEEecc
Confidence 35677666444433223345777889999999999876443
No 59
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=29.26 E-value=39 Score=28.22 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=25.5
Q ss_pred CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCC
Q psy15702 9 AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEE 47 (259)
Q Consensus 9 ~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~ 47 (259)
.-+++|++||.--||++|++.+.+ .| =.-+-+++.
T Consensus 186 ~~~i~l~IGPEGGfs~~Ei~~~~~---~G-f~~vsLG~r 220 (251)
T 4e8b_A 186 VERVRLLIGPEGGLSADEIAMTAR---YQ-FTDILLGPR 220 (251)
T ss_dssp CCEEEEEECCTTCCCHHHHHHHHH---TT-CEEEBCCSS
T ss_pred CCcEEEEECCCCCCCHHHHHHHHH---CC-CEEecCCCC
Confidence 346889999999999999887653 44 345556663
No 60
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=29.20 E-value=16 Score=28.07 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=26.3
Q ss_pred cCCccEEEEcCCCCCCCHHHHHHHHHHHHc----CCcEEEEecCCC
Q psy15702 7 LRAASLFICTGPREQFTITELNSLKTYLDE----GGSLLIALGEEG 48 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E~~~L~~fl~~----GG~llv~~~~~~ 48 (259)
+.++|.+||+.|.....- ...+++|+++ |-++.++...++
T Consensus 76 l~~yd~iilG~P~~~g~~--~~~~~~fl~~~~l~gk~v~~f~t~g~ 119 (162)
T 3klb_A 76 PEKYEVLFVGFPVWWYIA--PTIINTFLESYDFAGKIVVPFATSGG 119 (162)
T ss_dssp GGGCSEEEEEEECBTTBC--CHHHHHHHHTSCCTTCEEEEEEECSS
T ss_pred hhhCCEEEEEcccccCCC--CHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 568999999999853322 3567788865 555655554443
No 61
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=28.88 E-value=1.1e+02 Score=23.92 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=38.4
Q ss_pred cCCccEEEEcCCCC----CCCHHHHHHHHHHHHcCCcEEEEecCC----------C-CCCCCccHHHHHHHhCcccCCce
Q psy15702 7 LRAASLFICTGPRE----QFTITELNSLKTYLDEGGSLLIALGEE----------G-ERGSSTNINFLLEQYGVSVNSDC 71 (259)
Q Consensus 7 p~~advLVI~~P~~----~fs~~E~~~L~~fl~~GG~llv~~~~~----------~-~~~~~~nln~LL~~~Gi~~~~~~ 71 (259)
++++|+|||.|... .-.+..++.|+++.++|..+.-..... + .......+.+.|++.|+.+.++.
T Consensus 84 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~ 163 (193)
T 1oi4_A 84 PAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQE 163 (193)
T ss_dssp GGGCSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSS
T ss_pred cccCCEEEECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCC
Confidence 36789999988621 124556778888888776655443220 0 00112344556666677776554
Q ss_pred ee
Q psy15702 72 VV 73 (259)
Q Consensus 72 V~ 73 (259)
++
T Consensus 164 ~v 165 (193)
T 1oi4_A 164 VV 165 (193)
T ss_dssp CE
T ss_pred EE
Confidence 44
No 62
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=28.72 E-value=26 Score=30.62 Aligned_cols=39 Identities=13% Similarity=0.265 Sum_probs=30.7
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..|..+|++++...-..+++.+ ++.+.+.|+.||++++.
T Consensus 264 ~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 264 TIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp CCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 4566899999988877888876 56666677899998885
No 63
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=28.38 E-value=41 Score=28.79 Aligned_cols=60 Identities=17% Similarity=0.115 Sum_probs=40.5
Q ss_pred hhcC--C-ccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 5 ELLR--A-ASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 5 ~ip~--~-advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
++|+ . +|++|++-|. +.-.+.+++-++.|=+.+|.+..+-.......+...++++|+.+-
T Consensus 64 el~~~~~~~DvaIi~vp~----~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 64 EALAEHPEINTSIVFVPA----PFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp HHHHHCTTCCEEEECCCG----GGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHhhcCCCCCEEEEecCH----HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4565 4 9999999884 455778888889999966655444211112357778888998653
No 64
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=28.21 E-value=53 Score=27.89 Aligned_cols=39 Identities=15% Similarity=0.203 Sum_probs=30.7
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..|..+|++++..--..+++++ +..+.+-|+.||++++.
T Consensus 231 ~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 231 PLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp CCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4566899999888777788753 66778888999999885
No 65
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=27.86 E-value=43 Score=26.09 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=37.6
Q ss_pred hcCCccEEEEcCCCCCCCH-HHHHHHHHHHH-------cCCcEEEEecCCCCC---CCCccHHHHHHHhCcccCC
Q psy15702 6 LLRAASLFICTGPREQFTI-TELNSLKTYLD-------EGGSLLIALGEEGER---GSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~-~E~~~L~~fl~-------~GG~llv~~~~~~~~---~~~~nln~LL~~~Gi~~~~ 69 (259)
-..+||.+||+.|...++- ..++..-+.+. +|-++.++...++.. .....+..+++.+|+.+-.
T Consensus 69 ~l~~aD~ii~~sP~y~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg~~g~~~~~~~l~~~l~~~g~~~~~ 143 (193)
T 1rtt_A 69 QIRAADALLFATPEYNYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGRFGTARAQYHLRQTLVFLDVHPLN 143 (193)
T ss_dssp HHHHCSEEEEECCEETTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSSTTTTHHHHHHHHHHHHHHTCEECC
T ss_pred HHHhCCEEEEEccccccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCCCCccHHHHHHHHHHHHHcCCEEcC
Confidence 3467999999999865442 23444444442 244444444332211 1234677888889998876
No 66
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=27.83 E-value=71 Score=25.22 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=36.1
Q ss_pred CCccEEEEcCCCCC----------CCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQ----------FTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~----------fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
...|.+++..|... ..+.=+..+.+.|+.||.+++..+... .....-..+++.|..+
T Consensus 107 ~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~---~~~~~~~~~~~~g~~~ 173 (213)
T 2fca_A 107 GEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG---LFEYSLKSFSEYGLLL 173 (213)
T ss_dssp TSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH---HHHHHHHHHHHHTCEE
T ss_pred CCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH---HHHHHHHHHHHCCCcc
Confidence 34677777655321 134558899999999999998875431 1123345566777654
No 67
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=27.79 E-value=41 Score=29.22 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=30.7
Q ss_pred hcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 6 LLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
.+.++|++++..-=.++++++ ++.+.+-++.||+++|.
T Consensus 241 ~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 241 PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 356789999988888899886 56667778899999886
No 68
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=27.67 E-value=43 Score=25.05 Aligned_cols=54 Identities=11% Similarity=-0.009 Sum_probs=34.4
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++...+ ...+.-+..+.+. .||.+++...... ....+...++++|..+.
T Consensus 99 ~~~D~i~~~~~--~~~~~~l~~~~~~--~gG~l~~~~~~~~---~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 99 LEFNKAFIGGT--KNIEKIIEILDKK--KINHIVANTIVLE---NAAKIINEFESRGYNVD 152 (183)
T ss_dssp CCCSEEEECSC--SCHHHHHHHHHHT--TCCEEEEEESCHH---HHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEECCc--ccHHHHHHHHhhC--CCCEEEEEecccc---cHHHHHHHHHHcCCeEE
Confidence 46899988888 2334445555555 8888887653221 23456778888895553
No 69
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=27.33 E-value=53 Score=31.21 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=29.6
Q ss_pred cCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 7 LRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
++++++||+.+.. -++++..++|++ +||+|++..-.
T Consensus 450 l~~y~lvv~P~~~-~~~~~~~~~L~~---~GG~lv~~~~s 485 (645)
T 1kwg_A 450 LRGYAFAVVPSLP-IVREEALEAFRE---AEGPVLFGPRS 485 (645)
T ss_dssp CTTCSEEEESCCS-SCCHHHHHHHHT---CSSCEEECTTT
T ss_pred cccCCEEEEechh-hcCHHHHHHHHh---CCCEEEEeccC
Confidence 6788999988776 489999999999 99999875433
No 70
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=27.23 E-value=26 Score=30.38 Aligned_cols=40 Identities=20% Similarity=0.203 Sum_probs=30.7
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEe
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIAL 44 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~ 44 (259)
.+|..+|++++...-..+.+.+ +..+.+.|+.||++++.-
T Consensus 244 ~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 244 PLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp CCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 3566799999888776788764 667777888999988763
No 71
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=27.09 E-value=51 Score=25.88 Aligned_cols=35 Identities=9% Similarity=0.132 Sum_probs=24.4
Q ss_pred CCccEEEEcCCCCCCCHH--------HHHHHHHHHHcCCcEEEE
Q psy15702 8 RAASLFICTGPREQFTIT--------ELNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~--------E~~~L~~fl~~GG~llv~ 43 (259)
.++|.|||.||.. +.+. +.+.|++++++|..+|=.
T Consensus 41 ~~~dglilpG~g~-~~~~~~~l~~~~~~~~i~~~~~~~~PilGI 83 (201)
T 1gpw_B 41 DLYDLLFIPGVGH-FGEGMRRLRENDLIDFVRKHVEDERYVVGV 83 (201)
T ss_dssp SCCSEEEECCCSC-SHHHHHHHHHTTCHHHHHHHHHTTCEEEEE
T ss_pred cCCCEEEECCCCc-HHHHHHHHHhhCHHHHHHHHHHcCCeEEEE
Confidence 6899999999853 4332 457788888877665543
No 72
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=27.00 E-value=1.3e+02 Score=24.61 Aligned_cols=45 Identities=11% Similarity=0.226 Sum_probs=34.8
Q ss_pred CCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 18 PREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 18 P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
....+++.-+++|++..++|.++.+..+-. ...+..+++++|+..
T Consensus 19 ~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~-----~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 19 PDHTISPAVKNAIAAARARGVNVVLTTGRP-----YAGVHNYLKELHMEQ 63 (282)
T ss_dssp TTSCCCHHHHHHHHHHHHTTCEEEEECSSC-----GGGTHHHHHHTTCCS
T ss_pred CCCcCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHhCCCC
Confidence 445689999999999999988877776543 346788889988753
No 73
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=26.94 E-value=28 Score=29.52 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=29.7
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEe
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIAL 44 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~ 44 (259)
..++.+|++++...-..+++.+ +..+.+.|+.||++++.-
T Consensus 228 ~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 228 DYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp CCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 4566799999988776776654 566677778999988863
No 74
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=26.62 E-value=16 Score=31.21 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=43.5
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCCceee
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNSDCVV 73 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~~~V~ 73 (259)
++++.||+++|.|-+ +--..+..|.+..+ .++.+++++|... -+..|+ ++|+..-.+.++
T Consensus 182 ~ll~~aD~viiTGsT--lvN~Ti~~lL~~~~-~a~~vvl~GPS~p-----~~P~lf-~~Gv~~l~G~~V 241 (270)
T 2h1q_A 182 FILPECDYVYITCAS--VVDKTLPRLLELSR-NARRITLVGPGTP-----LAPVLF-EHGLQELSGFMV 241 (270)
T ss_dssp HHGGGCSEEEEETHH--HHHTCHHHHHHHTT-TSSEEEEESTTCC-----CCGGGG-GTTCSEEEEEEE
T ss_pred HHhhcCCEEEEEeee--eecCCHHHHHHhCc-cCCeEEEEecChh-----hhHHHH-hcCcCEEEEeEe
Confidence 478899999999885 45555666766664 5778888899853 222455 599998888766
No 75
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=26.60 E-value=16 Score=28.85 Aligned_cols=61 Identities=21% Similarity=0.191 Sum_probs=35.7
Q ss_pred cCCccEEEEcCCCCCCCHHHHHHHHHHHHc-------CCcEEEEecCCCCCCC---C-ccHHHHHHHhCcccCCc
Q psy15702 7 LRAASLFICTGPREQFTITELNSLKTYLDE-------GGSLLIALGEEGERGS---S-TNINFLLEQYGVSVNSD 70 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E~~~L~~fl~~-------GG~llv~~~~~~~~~~---~-~nln~LL~~~Gi~~~~~ 70 (259)
..++|.+||+.|....+- -..++.|++. |-.++++.. ++.... . ..+..+|+.+|+.+-..
T Consensus 67 i~~aD~ii~~sP~y~~~~--p~~lK~~ld~l~~~~~~gK~~~~~~t-gg~~~~~~a~~~~l~~~l~~~g~~~v~~ 138 (197)
T 2vzf_A 67 TCNADGLIVATPIYKASY--TGLLKAFLDILPQFALAGKAALPLAT-GGSPAHVLALDYGLRPVLHSMGVRHVVQ 138 (197)
T ss_dssp HHHCSEEEEEEECBTTBC--CHHHHHHHTTSCTTTTTTCEEEEEEE-ESSGGGGGHHHHTHHHHHHTTTCSEECC
T ss_pred HHHCCEEEEEeCccCCCC--CHHHHHHHHhccccccCCCEEEEEEE-CCCcchhhHHHHHHHHHHHHcCCEeccc
Confidence 457999999999864442 2234445442 333444433 332111 1 25788999999987654
No 76
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=26.51 E-value=23 Score=30.59 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=29.8
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
.+|..+|++++...-..+.+.+ +..+.+.|+.||++++.
T Consensus 245 ~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 245 PLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3566799998888776777764 56667777899998876
No 77
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=26.37 E-value=98 Score=28.10 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=45.5
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCC-CCCC-----CccHHHHHHHhCcccC-Cce
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEG-ERGS-----STNINFLLEQYGVSVN-SDC 71 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~-~~~~-----~~nln~LL~~~Gi~~~-~~~ 71 (259)
.++|+.+|+.||+-| .+.-.+.+++-++.|=+.+|++..+- |... ...+-..++++|+.+- +++
T Consensus 59 ~~lp~~~Dlavi~vp----~~~~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc 129 (457)
T 2csu_A 59 KDIPDEIDLAIIVVP----KRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNC 129 (457)
T ss_dssp TSCSSCCSEEEECSC----HHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSC
T ss_pred HHcCCCCCEEEEecC----HHHHHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCc
Confidence 367889999999988 35567888888899988777766543 2111 3456677889999875 554
No 78
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=25.93 E-value=47 Score=28.98 Aligned_cols=38 Identities=11% Similarity=0.162 Sum_probs=29.1
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..|+. |++++...-..+++++ ++.+.+-|+.||++++.
T Consensus 258 ~~p~~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 258 GVPKG-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp CCCCC-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCC-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 45654 9998888777778766 56677788999998885
No 79
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=25.93 E-value=43 Score=25.49 Aligned_cols=57 Identities=16% Similarity=0.198 Sum_probs=34.3
Q ss_pred CCccEEEEcCCCCCCCHH--------HHHHHHHHHH--cCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQFTIT--------ELNSLKTYLD--EGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~--------E~~~L~~fl~--~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
...|+++...|-....+. -...++++++ .||.+++...... ....+..++++.|.+.
T Consensus 77 ~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~---~~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 77 ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAVTVGMLYLLVIEAN---RPKEVLARLEERGYGT 143 (170)
T ss_dssp GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGG---CHHHHHHHHHHTTCEE
T ss_pred CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhCCCCEEEEEEecCC---CHHHHHHHHHHCCCcE
Confidence 567888776554322211 1333444443 9999888754432 2456888899999765
No 80
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=25.88 E-value=37 Score=29.28 Aligned_cols=38 Identities=13% Similarity=0.227 Sum_probs=29.5
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..| .+|++++..--..+++.+ +..+.+-|+.||++++.
T Consensus 244 ~~p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~ 285 (348)
T 3lst_A 244 EVP-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVI 285 (348)
T ss_dssp CCC-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCC-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 456 899999888777788775 55666777899998885
No 81
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=25.30 E-value=50 Score=21.48 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=14.6
Q ss_pred CCCHHHHHHHHHHHHc
Q psy15702 21 QFTITELNSLKTYLDE 36 (259)
Q Consensus 21 ~fs~~E~~~L~~fl~~ 36 (259)
.+|++|+.+|-.||..
T Consensus 63 ~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 63 NVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 7999999999999964
No 82
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=25.02 E-value=31 Score=27.70 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=39.0
Q ss_pred CCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEecCCCCC------------CCCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIALGEEGER------------GSSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~~~~~~~------------~~~~nln~LL~~~Gi~~ 67 (259)
...|+++....-..+++.+ +..+.+.|+.||.+++........ .....+..+|++.|.++
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 232 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRV 232 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCE
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEE
Confidence 4679888887766665533 677788889999998875321100 01245677777778765
No 83
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=25.01 E-value=17 Score=31.86 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=35.2
Q ss_pred CCccEEEEcCCCCCCCHH-HHHHHHHHHH----cCCcEEEEecCCCCCCCCccHHHHHHHhCcccCCc
Q psy15702 8 RAASLFICTGPREQFTIT-ELNSLKTYLD----EGGSLLIALGEEGERGSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~-E~~~L~~fl~----~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~~ 70 (259)
.++|.+||+.|....... .++..-+++. +|..+.++...+........+..+|+..|+.+-..
T Consensus 301 ~~~d~ii~g~p~y~~~~~~~~~~~l~~l~~~~~~~k~~~~~~s~g~~~~a~~~l~~~l~~~g~~~~~~ 368 (398)
T 1ycg_A 301 LDARAVLVGSPTINNDILPVVSPLLDDLVGLRPKNKVGLAFGAYGWGGGAQKILEERLKAAKIELIAE 368 (398)
T ss_dssp HHCSEEEEECCCBTTBCCGGGHHHHHHHHHHCCSSCEEEEEEEESSSCCHHHHHHHHHHHTTCEESCS
T ss_pred HHCCEEEEECCccCccchHHHHHHHHHHhccccCCCEEEEEEeCCCchHHHHHHHHHHHHCCeEEecC
Confidence 578999999997432211 1222222322 34444444433322223456889999999887543
No 84
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=24.71 E-value=38 Score=27.12 Aligned_cols=39 Identities=15% Similarity=0.189 Sum_probs=25.3
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
...|+++..-|.....+.-+..+.++|+.||.+++...+
T Consensus 142 ~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 180 (230)
T 1fbn_A 142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAIKA 180 (230)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 567887743232111133378889999999999987543
No 85
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=24.19 E-value=33 Score=26.84 Aligned_cols=61 Identities=20% Similarity=0.200 Sum_probs=39.7
Q ss_pred CCccEEEEcCCCCCCC--HHHHHHHHHHHHcCCcEEEEecCCCCC---------CCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQFT--ITELNSLKTYLDEGGSLLIALGEEGER---------GSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~fs--~~E~~~L~~fl~~GG~llv~~~~~~~~---------~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++....-..+. ..-+..+.+.|+.||.+++..-..... -....+..++++.|.++.
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 176 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVG 176 (219)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEE
T ss_pred CCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEE
Confidence 3578888776654443 344788888999999988763221110 113567788888898763
No 86
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=24.11 E-value=35 Score=27.08 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=29.6
Q ss_pred CCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEe
Q psy15702 8 RAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIAL 44 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~ 44 (259)
...|+++....-..+++.+ +..+.+.|+.||.+++..
T Consensus 108 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 108 EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6789999888777777765 677888899999988764
No 87
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=23.75 E-value=87 Score=27.57 Aligned_cols=58 Identities=14% Similarity=0.056 Sum_probs=43.4
Q ss_pred CccEEEEcC-CC-CCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 9 AASLFICTG-PR-EQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 9 ~advLVI~~-P~-~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
++|+|||.- |. -.|++.-...|.+-+++|=+++-.+...-. ..+.+..+.++.|+++-
T Consensus 89 ~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G~nVvsglh~~l~--~~pel~~~A~~~Gv~i~ 148 (350)
T 2g0t_A 89 GAEVLIIGVSNPGGYLEEQIATLVKKALSLGMDVISGLHFKIS--QQTEFLKIAHENGTRII 148 (350)
T ss_dssp TCCEEEECCCSCCHHHHHHHHHHHHHHHHTTCEEEECCCC--C--CHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEecCCCCCCCHHHHHHHHHHHHcCCcEEeCChhhhh--CCHHHHHHHHHCCCEEE
Confidence 699999974 43 237778899999999999998776655321 34668888999998874
No 88
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.72 E-value=68 Score=29.59 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=42.7
Q ss_pred hhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC-Cce
Q psy15702 5 ELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN-SDC 71 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~-~~~ 71 (259)
++|+.+|+.||.-|. +.-.+++++-.++|=++ +.+..+-.......+-...+++|+.+- +++
T Consensus 32 ~~p~~~DlavI~vPa----~~v~~~v~e~~~~Gv~~-viis~Gf~~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 32 QKLPDANLALISVAG----EYAAELANQALDRNLNV-MMFSDNVTLEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp HHSTTCCEEEECSCH----HHHHHHHHHHHHTTCEE-EECCCCCCHHHHHHHHHHHHHTTCCEECSSC
T ss_pred hcCCCCCEEEEecCH----HHHHHHHHHHHhcCCCE-EEECCCCCHHHHHHHHHHHHHcCCEEEecCc
Confidence 578899999999994 45568888889999994 555554321112345567788998863 443
No 89
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=23.58 E-value=31 Score=27.43 Aligned_cols=39 Identities=15% Similarity=0.257 Sum_probs=28.0
Q ss_pred cCCccEEEEcCCCCCCCHHH-HHHHHHHHHcCCcEEEEecC
Q psy15702 7 LRAASLFICTGPREQFTITE-LNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~E-~~~L~~fl~~GG~llv~~~~ 46 (259)
++..|+++...|.. -.... +..+.+.|+.||.+++....
T Consensus 141 ~~~~D~v~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 180 (227)
T 1g8a_A 141 VPKVDVIFEDVAQP-TQAKILIDNAEVYLKRGGYGMIAVKS 180 (227)
T ss_dssp CCCEEEEEECCCST-THHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCCceEEEECCCCH-hHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 45689888776632 22234 78899999999999988544
No 90
>1jql_B DNA polymerase III, delta subunit; processivity clamp, clamp loader, DNA replication, AAA+ ATPase, transferase; HET: DNA; 2.50A {Escherichia coli} SCOP: c.37.1.20
Probab=23.53 E-value=1.6e+02 Score=21.56 Aligned_cols=60 Identities=17% Similarity=0.107 Sum_probs=37.7
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHH--cCCcEEEEecCCCCCC-CCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLD--EGGSLLIALGEEGERG-SSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~--~GG~llv~~~~~~~~~-~~~nln~LL~~~Gi~~ 67 (259)
.+-.+++|-.|.........++|.+|++ ....++|+..+.-..+ ..+-+-.-+++.|+.+
T Consensus 75 ~~rrlV~v~~~~~~~~~~~~~~L~~yl~~p~~~~~lvi~~~kld~~~~~~k~~k~l~k~g~~v 137 (140)
T 1jql_B 75 ASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQV 137 (140)
T ss_dssp CCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEE
T ss_pred CCCEEEEEECCCCCCChHHHHHHHHHHhcCCCCEEEEEEeCCcChhHHhhHHHHHHHhCeEEE
Confidence 4556888888876677777888999997 4677777776432210 1123444455556543
No 91
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=23.45 E-value=78 Score=23.11 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=26.6
Q ss_pred CCccEEEEcCCCCCCC-------------HHHHHHHHHHHHcCCcEEEEecC
Q psy15702 8 RAASLFICTGPREQFT-------------ITELNSLKTYLDEGGSLLIALGE 46 (259)
Q Consensus 8 ~~advLVI~~P~~~fs-------------~~E~~~L~~fl~~GG~llv~~~~ 46 (259)
...|+++...|-.-+. ..-+..+.+.|+.||.+++..-.
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 4689888866643222 34467778888999998875443
No 92
>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*
Probab=23.44 E-value=59 Score=20.55 Aligned_cols=17 Identities=18% Similarity=0.178 Sum_probs=14.9
Q ss_pred CCCCHHHHHHHHHHHHc
Q psy15702 20 EQFTITELNSLKTYLDE 36 (259)
Q Consensus 20 ~~fs~~E~~~L~~fl~~ 36 (259)
..++++|+.+|-.||..
T Consensus 53 ~~ls~~ei~~l~~yl~~ 69 (71)
T 1c75_A 53 GIAKGAEAEAVAAWLAE 69 (71)
T ss_dssp CSSCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 56999999999999964
No 93
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=23.23 E-value=80 Score=27.06 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=29.4
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHc---CCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDE---GGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~---GG~llv~ 43 (259)
.+| ++|++++...-..+++.+ ++.+.+.|+. ||++++.
T Consensus 243 ~~p-~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 243 SIP-NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp CCC-CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred CCC-CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 345 499999888777787754 6778888888 9998876
No 94
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=23.22 E-value=61 Score=28.20 Aligned_cols=38 Identities=11% Similarity=0.132 Sum_probs=28.8
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~ 43 (259)
..|+. |++++..--..+++++ +..+.+-|+.||++++.
T Consensus 256 ~~p~~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 256 EVPSG-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp CCCCC-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCC-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 45654 9998888777788765 56677778899998885
No 95
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=23.13 E-value=29 Score=25.79 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=26.1
Q ss_pred CccEEEEcCCCCCCCHHHHHHHH--HHHHcCCcEEEEecCC
Q psy15702 9 AASLFICTGPREQFTITELNSLK--TYLDEGGSLLIALGEE 47 (259)
Q Consensus 9 ~advLVI~~P~~~fs~~E~~~L~--~fl~~GG~llv~~~~~ 47 (259)
..|+++...|-....+.-++.+. +.|+.||.+++.....
T Consensus 110 ~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 110 RFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred ceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 68888777664333445566666 6678899888776654
No 96
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=23.08 E-value=1.2e+02 Score=24.76 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=35.7
Q ss_pred CCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcc
Q psy15702 17 GPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVS 66 (259)
Q Consensus 17 ~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~ 66 (259)
.+...+++.-.++|+++.++|.++.+..+-. ...+..+++.+|+.
T Consensus 34 ~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~-----~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 34 SPDHFLTPYAKETLKLLTARGINFVFATGRH-----YIDVGQIRDNLGIR 78 (285)
T ss_dssp CTTSCCCHHHHHHHHHHHTTTCEEEEECSSC-----GGGGHHHHHHHCSC
T ss_pred CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHhcCCC
Confidence 4556789999999999999988877775543 35678899999975
No 97
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.86 E-value=31 Score=28.13 Aligned_cols=66 Identities=11% Similarity=0.116 Sum_probs=37.1
Q ss_pred cCCccEEEEcCCCCCCCHH-HHHHHHHHH--------HcCCcEEEEecCCCC--CCCCccHHHHHHHhCcccCCcee
Q psy15702 7 LRAASLFICTGPREQFTIT-ELNSLKTYL--------DEGGSLLIALGEEGE--RGSSTNINFLLEQYGVSVNSDCV 72 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~-E~~~L~~fl--------~~GG~llv~~~~~~~--~~~~~nln~LL~~~Gi~~~~~~V 72 (259)
..+||++||+.|..-++-. .++..-+.+ -+|-+++++...++. ......+..++..+|+.+-....
T Consensus 77 l~~AD~iI~~sP~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~g~~~~~~~l~~~l~~~G~~~v~~~~ 153 (242)
T 1sqs_A 77 LLESDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYMGGQILHQVS 153 (242)
T ss_dssp HHHCSEEEEEEEECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSCCSCCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHCCEEEEEccccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCCchhhHHHHHHHHHHHCCCeeeeEEE
Confidence 4689999999998654432 233333332 223344444333221 12234677888889988765443
No 98
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=22.84 E-value=1.8e+02 Score=22.14 Aligned_cols=36 Identities=8% Similarity=0.141 Sum_probs=25.5
Q ss_pred CCccEEEEcCCCC-----CCCHHHHHHHHHHHHcCCcEEEE
Q psy15702 8 RAASLFICTGPRE-----QFTITELNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 8 ~~advLVI~~P~~-----~fs~~E~~~L~~fl~~GG~llv~ 43 (259)
+++|+|||.|... .-.+.-++.|+++.++|..+.-.
T Consensus 74 ~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~ai 114 (190)
T 2vrn_A 74 SDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAI 114 (190)
T ss_dssp GGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC
T ss_pred hhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEE
Confidence 5789999998741 23566678888888877665443
No 99
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=22.72 E-value=1.3e+02 Score=23.87 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=25.6
Q ss_pred hhcCCccEEEEcCC---CCCCCHHHHHHHHHHHHcCCcEEEE
Q psy15702 5 ELLRAASLFICTGP---REQFTITELNSLKTYLDEGGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P---~~~fs~~E~~~L~~fl~~GG~llv~ 43 (259)
++++++|+|||.|- .. -++.-++.|+++.++|..+.-.
T Consensus 59 ~~~~~~D~livpGG~~~~~-~~~~l~~~l~~~~~~gk~iaai 99 (206)
T 3f5d_A 59 LEPANFNLLVMIGGDSWSN-DNKKLLHFVKTAFQKNIPIAAI 99 (206)
T ss_dssp SSCSCCSEEEECCBSCCCC-CCHHHHHHHHHHHHTTCCEEEE
T ss_pred hCCcCCCEEEEcCCCChhh-cCHHHHHHHHHHHHcCCEEEEE
Confidence 34678999999864 33 4555677788887776665443
No 100
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=22.66 E-value=38 Score=21.58 Aligned_cols=29 Identities=17% Similarity=0.493 Sum_probs=21.6
Q ss_pred CCccEEEEcC-------CCCCCCHHHHHHHHHHHHc
Q psy15702 8 RAASLFICTG-------PREQFTITELNSLKTYLDE 36 (259)
Q Consensus 8 ~~advLVI~~-------P~~~fs~~E~~~L~~fl~~ 36 (259)
++.+..|+.+ |+.++++.|+.+-+.||.+
T Consensus 20 ~~~~gyvv~HGdH~HyIpk~~Ls~~el~~A~~yl~g 55 (55)
T 2cs7_A 20 DTGDAYIVPHGDHYHYIPKNELSASELAAAEAFLSG 55 (55)
T ss_dssp ECSSEEEEEETTEEEEEEGGGSCHHHHHHHHHHHHC
T ss_pred cCCCeEEEecCCeEEEeEhHHCCHHHHHHHHHHhcC
Confidence 3455555544 5778999999999999863
No 101
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=22.54 E-value=53 Score=22.86 Aligned_cols=19 Identities=32% Similarity=0.580 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHHHHHcCC
Q psy15702 20 EQFTITELNSLKTYLDEGG 38 (259)
Q Consensus 20 ~~fs~~E~~~L~~fl~~GG 38 (259)
..+++.|++++..||++-|
T Consensus 61 ~~~s~~eLdk~t~wLD~rg 79 (85)
T 2l48_A 61 KPTSDAQLKAMKEYLDRKG 79 (85)
T ss_dssp CCCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHhccC
Confidence 3579999999999998766
No 102
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=22.54 E-value=66 Score=20.78 Aligned_cols=16 Identities=13% Similarity=0.169 Sum_probs=14.5
Q ss_pred CCCHHHHHHHHHHHHc
Q psy15702 21 QFTITELNSLKTYLDE 36 (259)
Q Consensus 21 ~fs~~E~~~L~~fl~~ 36 (259)
.++++|+.+|-.||..
T Consensus 65 ~ls~~ei~~l~~yl~~ 80 (82)
T 2exv_A 65 AVSDDEAQTLAKWVLS 80 (82)
T ss_dssp CCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6999999999999964
No 103
>2glo_A Brinker CG9653-PA; protein-DNA complex, helix-turn-helix motif, transcription/DNA complex; NMR {Drosophila melanogaster}
Probab=22.43 E-value=1.4e+02 Score=18.23 Aligned_cols=37 Identities=14% Similarity=0.066 Sum_probs=26.4
Q ss_pred CCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcc
Q psy15702 18 PREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVS 66 (259)
Q Consensus 18 P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~ 66 (259)
.+..||++....+.++++.|.. . ..++..+..+|||.
T Consensus 2 ~r~~ys~efK~~~~~~~~~g~s------~------~~~~~~vA~~~gIs 38 (59)
T 2glo_A 2 SRRIFTPHFKLQVLESYRNDND------C------KGNQRATARKYNIH 38 (59)
T ss_dssp CCCCCCHHHHHHHHHHHHHCTT------T------TTCHHHHHHHTTSC
T ss_pred CCCcCCHHHHHHHHHHHHcCCC------c------chHHHHHHHHHCcC
Confidence 4557999887777888765532 1 23588999999985
No 104
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=22.25 E-value=66 Score=25.43 Aligned_cols=61 Identities=18% Similarity=0.146 Sum_probs=39.9
Q ss_pred CCccEEEEcCCCCCCCH--HHHHHHHHHHHcCCcEEEEecCCCCC------------------CCCccHHHHHHHhCccc
Q psy15702 8 RAASLFICTGPREQFTI--TELNSLKTYLDEGGSLLIALGEEGER------------------GSSTNINFLLEQYGVSV 67 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~--~E~~~L~~fl~~GG~llv~~~~~~~~------------------~~~~nln~LL~~~Gi~~ 67 (259)
...|+++..+.-..+.+ .-+..+.+.|+.||.+++........ -....+..++++.|.++
T Consensus 115 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp TCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred CCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 56888888776554443 34788888999999988875321110 01134777888888776
Q ss_pred C
Q psy15702 68 N 68 (259)
Q Consensus 68 ~ 68 (259)
.
T Consensus 195 ~ 195 (242)
T 3l8d_A 195 V 195 (242)
T ss_dssp E
T ss_pred E
Confidence 4
No 105
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=22.20 E-value=15 Score=28.30 Aligned_cols=66 Identities=11% Similarity=0.106 Sum_probs=38.5
Q ss_pred hcCCccEEEEcCCCCCCCH-HHHHHHHHHHH----cCCcEEEEecCCCCC---CCCccHHHHHHHhCcccCCce
Q psy15702 6 LLRAASLFICTGPREQFTI-TELNSLKTYLD----EGGSLLIALGEEGER---GSSTNINFLLEQYGVSVNSDC 71 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~-~E~~~L~~fl~----~GG~llv~~~~~~~~---~~~~nln~LL~~~Gi~~~~~~ 71 (259)
-..+||.+||+.|...++- ..++..-+++. +|..+.++...++.. .....+..+|+.+|+.+-+..
T Consensus 60 ~i~~aD~ii~~tP~y~~~~p~~lk~~lD~l~~~~~~gK~~~~~~~sgg~~g~~~a~~~l~~~l~~~g~~~v~~~ 133 (174)
T 3gfs_A 60 RVTKADAIVLLSPEYHSGMSGALKNALDFLSSEQFKYKPVALLAVAGGGDGGINALNNMRTVMRGVYANVIPKQ 133 (174)
T ss_dssp HHHHCSSEEEEEECSSSSCCHHHHHHHHTCCHHHHTTCEEEEEEECCSTTCSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHCCEEEEEcCCcCCCCCHHHHHHHHHhCHhhhCCCcEEEEEECCCChhHHHHHHHHHHHHHHcCCEEecce
Confidence 3467999999999865443 23333334442 344455554222211 123568889999999875543
No 106
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=22.05 E-value=72 Score=27.43 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=29.4
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHc---CCcEEEE
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDE---GGSLLIA 43 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~---GG~llv~ 43 (259)
.+| ++|++++...-..+++.+ ++.+.+-|+. ||++++.
T Consensus 248 ~~~-~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 248 SIP-SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp CCC-CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred CCC-CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 345 499999988877788755 6677778888 9998885
No 107
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=22.01 E-value=1.7e+02 Score=22.66 Aligned_cols=66 Identities=14% Similarity=0.050 Sum_probs=36.5
Q ss_pred cCCccEEEEcCC---CCC-CCHHHHHHHHHHHHcCCcEEEEecCCC----------C--CCCCccHHHHHHHhCcccCCc
Q psy15702 7 LRAASLFICTGP---REQ-FTITELNSLKTYLDEGGSLLIALGEEG----------E--RGSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 7 p~~advLVI~~P---~~~-fs~~E~~~L~~fl~~GG~llv~~~~~~----------~--~~~~~nln~LL~~~Gi~~~~~ 70 (259)
+++.|+|||.|- ..- -++.-++.|++|.++|..+ ..+-.+. + ....+++..-|++.|..+.+.
T Consensus 67 ~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~i-aaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~ 145 (177)
T 4hcj_A 67 AVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIV-AGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSE 145 (177)
T ss_dssp GGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEE-EEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSS
T ss_pred HhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEE-EEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecC
Confidence 678899999863 221 2344466777777776544 3332210 0 012345666677777766554
Q ss_pred eee
Q psy15702 71 CVV 73 (259)
Q Consensus 71 ~V~ 73 (259)
.|+
T Consensus 146 ~vV 148 (177)
T 4hcj_A 146 NVV 148 (177)
T ss_dssp SEE
T ss_pred CEE
Confidence 333
No 108
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=21.60 E-value=25 Score=27.10 Aligned_cols=64 Identities=16% Similarity=0.117 Sum_probs=35.4
Q ss_pred hcCCccEEEEcCCCCC---CCHHHHHHHHHHH-H------cCCcEEEEecCCCCC-------CCCccHHHHHHHhCcccC
Q psy15702 6 LLRAASLFICTGPREQ---FTITELNSLKTYL-D------EGGSLLIALGEEGER-------GSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 6 ip~~advLVI~~P~~~---fs~~E~~~L~~fl-~------~GG~llv~~~~~~~~-------~~~~nln~LL~~~Gi~~~ 68 (259)
-+.++|++||+.|+.. +++..-..+++|+ + -.|+.+.+++.++.. .....+..+|++.|..+-
T Consensus 42 ~l~~~d~ii~g~pt~~~G~~~~~~p~~~~~fl~~~l~~~~l~gk~~avfg~g~~~~y~~~f~~a~~~l~~~l~~~G~~~~ 121 (173)
T 2fcr_A 42 ALKDYDLLFLGAPTWNTGADTERSGTSWDEFLYDKLPEVDMKDLPVAIFGLGDAEGYPDNFCDAIEEIHDCFAKQGAKPV 121 (173)
T ss_dssp GGGGCSEEEEEEECCSTTCSSCCSCSTHHHHHHHTGGGCCCTTCEEEEEEEECTTTCTTSTTTHHHHHHHHHHHTTCEEE
T ss_pred HHccCCEEEEEEeecCCCCcCccCcHHHHHHHHhhccccccCCCEEEEEEECCCchhhHHHHHHHHHHHHHHHHCCCEEE
Confidence 4568999999999843 2100013355666 4 124444433332211 122567788888898764
Q ss_pred C
Q psy15702 69 S 69 (259)
Q Consensus 69 ~ 69 (259)
.
T Consensus 122 ~ 122 (173)
T 2fcr_A 122 G 122 (173)
T ss_dssp C
T ss_pred e
Confidence 3
No 109
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=21.44 E-value=1.4e+02 Score=23.95 Aligned_cols=49 Identities=12% Similarity=0.189 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCCceee
Q psy15702 23 TITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNSDCVV 73 (259)
Q Consensus 23 s~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~~~V~ 73 (259)
++.-.++|++..++|-++.++.+-.+. ....+...++++|+.+..+.++
T Consensus 24 ~~~~~~ai~~l~~~Gi~v~laTgrs~r--~~~~~~~~l~~lg~~~~~~~ii 72 (266)
T 3pdw_A 24 IEEACEFVRTLKDRGVPYLFVTNNSSR--TPKQVADKLVSFDIPATEEQVF 72 (266)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCCSS--CHHHHHHHHHHTTCCCCGGGEE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCC--CHHHHHHHHHHcCCCCCHHHcc
Confidence 345688999999999999999774332 2456778889999987766555
No 110
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=21.43 E-value=67 Score=20.70 Aligned_cols=17 Identities=6% Similarity=0.198 Sum_probs=14.8
Q ss_pred CCCCHHHHHHHHHHHHc
Q psy15702 20 EQFTITELNSLKTYLDE 36 (259)
Q Consensus 20 ~~fs~~E~~~L~~fl~~ 36 (259)
..+|++|+.+|-+||..
T Consensus 61 ~~Ls~~ei~~l~~yl~~ 77 (79)
T 2d0s_A 61 PQVAEADIEKIVRWVLT 77 (79)
T ss_dssp TTSCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 36999999999999964
No 111
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=21.33 E-value=1.2e+02 Score=25.39 Aligned_cols=51 Identities=14% Similarity=0.098 Sum_probs=41.0
Q ss_pred EEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 14 ICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 14 VI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
+-..|...-|..++..|.+++++.|--.|+.++... ....+.+.++.|+++
T Consensus 199 ~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~---~~~~~~ia~~~g~~v 249 (284)
T 2prs_A 199 FTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFR---PAVVESVARGTSVRM 249 (284)
T ss_dssp EESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSC---SHHHHHHTTTSCCEE
T ss_pred eccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC---hHHHHHHHHHcCCeE
Confidence 345677889999999999999988877788888753 456777888889886
No 112
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=21.08 E-value=62 Score=25.19 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=38.2
Q ss_pred CCccEEEEcCCCCC-CCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccC
Q psy15702 8 RAASLFICTGPREQ-FTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVN 68 (259)
Q Consensus 8 ~~advLVI~~P~~~-fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~ 68 (259)
...|+++....-.. -...-+..+.+.|+.||.+++.. ..........+..+|++.|+++.
T Consensus 114 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~-~~~~~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 114 ESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAE-VSSRFEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp TCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEE-CGGGCSCHHHHHHHHHHTTEEEE
T ss_pred CCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEE-cCCCCCCHHHHHHHHHHCCCEEE
Confidence 35788877654321 11344777888899999988863 22111134568889999998764
No 113
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=20.95 E-value=1e+02 Score=25.51 Aligned_cols=39 Identities=8% Similarity=-0.011 Sum_probs=28.8
Q ss_pred CCcEEEEEecCcccccccccccccHHHHHHHHHhhcCCCC
Q psy15702 156 RGGKLVVLGSAALFSDQYLEREENDKMRQIILSFLLTDDI 195 (259)
Q Consensus 156 ~~grvvViGs~~~~~d~~~~~~~N~~f~~n~i~wL~~~~~ 195 (259)
++||++-.+=++--... +...++++++.|.+.|.++.+.
T Consensus 191 g~GRvfY~~lGH~~~~~-~~~p~~~~ll~~gI~WAa~~~~ 229 (252)
T 1t0b_A 191 GKGKIFYFRPGHETYPT-YHHPDVLKVIANAVRWAAPVNR 229 (252)
T ss_dssp TTEEEEEECCCCTTSCG-GGCHHHHHHHHHHHHHHCCSSC
T ss_pred CCccEEEECCCCCCCcc-cCCHHHHHHHHHHHHHHcCCCc
Confidence 78999999744422112 3458899999999999998733
No 114
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=20.88 E-value=43 Score=26.20 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=28.7
Q ss_pred CCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCC
Q psy15702 8 RAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEE 47 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~ 47 (259)
...|++++..+-..+. +.+.+.|+.||++++...+.
T Consensus 145 ~~fD~v~~~~~~~~~~----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CCEEEEEESSBBSSCC----HHHHHTEEEEEEEEEEESSS
T ss_pred CCeeEEEECCchHHHH----HHHHHHcCCCcEEEEEECCC
Confidence 4689999888876666 36788899999999987664
No 115
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=20.85 E-value=70 Score=21.62 Aligned_cols=30 Identities=10% Similarity=0.138 Sum_probs=21.5
Q ss_pred hhcCCccEEEEcCCCCCCCHHH----HHHHHHHHHc
Q psy15702 5 ELLRAASLFICTGPREQFTITE----LNSLKTYLDE 36 (259)
Q Consensus 5 ~ip~~advLVI~~P~~~fs~~E----~~~L~~fl~~ 36 (259)
+-+....+++|..|. +++++ ++++++.+.+
T Consensus 41 d~~r~YE~m~Il~P~--l~ee~~~~~vek~~~~i~~ 74 (77)
T 3zzp_A 41 TTPGRYEVNIVLNPN--LDQSQLQNEKEIIQRALEN 74 (77)
T ss_dssp SSTTEEEEEEEECTT--CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEEEECCC--CCHHHHHHHHHHHHHHHHh
Confidence 446778899999995 78876 4555666654
No 116
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=20.79 E-value=95 Score=24.59 Aligned_cols=63 Identities=13% Similarity=0.209 Sum_probs=39.6
Q ss_pred cCCccEEEEcCCCCCCCHH-HHHHHHHHHHc------CCcEEEEecC-CCC---CCCCccHHHHHHHhCcccCC
Q psy15702 7 LRAASLFICTGPREQFTIT-ELNSLKTYLDE------GGSLLIALGE-EGE---RGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 7 p~~advLVI~~P~~~fs~~-E~~~L~~fl~~------GG~llv~~~~-~~~---~~~~~nln~LL~~~Gi~~~~ 69 (259)
...||.+||+.|...++-. .++..-+++.+ .||-..++.. ++. ......+..+|..+|+.+-+
T Consensus 71 i~~AD~iVi~tP~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~~g~~~a~~~Lr~il~~lg~~~v~ 144 (199)
T 4hs4_A 71 IATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMIGGARAQNHLRQSLVFLDAYVLN 144 (199)
T ss_dssp HHHSSEEEEEECCBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSSSCSHHHHHHHHHHHHHTTCEECC
T ss_pred HHhCCEEEEEcCccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCCcccHHHHHHHHHHHHHcCCEEcC
Confidence 5689999999998665543 46666666654 3443333332 221 11234688999999998765
No 117
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=20.76 E-value=32 Score=26.55 Aligned_cols=36 Identities=8% Similarity=-0.046 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHH--HhCc
Q psy15702 27 LNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE--QYGV 65 (259)
Q Consensus 27 ~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~--~~Gi 65 (259)
+..+.+.|+.||.++++.-+.. ....+..+++ +.|.
T Consensus 147 l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~~l~~~~~gf 184 (215)
T 4dzr_A 147 AALPPYVLARGRAGVFLEVGHN---QADEVARLFAPWRERG 184 (215)
T ss_dssp HTCCGGGBCSSSEEEEEECTTS---CHHHHHHHTGGGGGGT
T ss_pred HHHHHHHhcCCCeEEEEEECCc---cHHHHHHHHHHhhcCC
Confidence 3445567788999555433322 2456777777 5564
No 118
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=20.74 E-value=84 Score=19.97 Aligned_cols=19 Identities=32% Similarity=0.405 Sum_probs=16.7
Q ss_pred CCCCCHHHHHHHHHHHHcC
Q psy15702 19 REQFTITELNSLKTYLDEG 37 (259)
Q Consensus 19 ~~~fs~~E~~~L~~fl~~G 37 (259)
+.+||++|=.+|-+||..-
T Consensus 2 R~~FT~edD~~L~~~v~~~ 20 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKEN 20 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999655
No 119
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=20.73 E-value=31 Score=26.78 Aligned_cols=40 Identities=8% Similarity=0.030 Sum_probs=25.7
Q ss_pred hcCCccEEEEcCCCCCCCHHHHHHHHHHHHc----CCcEEEEecCC
Q psy15702 6 LLRAASLFICTGPREQFTITELNSLKTYLDE----GGSLLIALGEE 47 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~E~~~L~~fl~~----GG~llv~~~~~ 47 (259)
-++++|++||+.|....... ..+++|+++ |-++.++...+
T Consensus 84 ~l~~yD~iilg~Pvy~g~~~--~~~~~fl~~~~l~gk~v~~f~t~g 127 (171)
T 4ici_A 84 NIGTYDVVFIGYPIWWDLAP--RIINTFIEGHSLKGKTVVPFATSG 127 (171)
T ss_dssp TGGGCSEEEEEEECBTTBCC--HHHHHHHHHSCCTTSEEEEEEECS
T ss_pred cHhHCCEEEEecccccCCch--HHHHHHHHHcCCCcCEEEEEEecC
Confidence 35789999999998543322 457777764 44455555444
No 120
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=20.65 E-value=77 Score=26.21 Aligned_cols=57 Identities=11% Similarity=0.073 Sum_probs=33.8
Q ss_pred cCCccEEEEcCCCCCC--------------------CHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHh
Q psy15702 7 LRAASLFICTGPREQF--------------------TITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQY 63 (259)
Q Consensus 7 p~~advLVI~~P~~~f--------------------s~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~ 63 (259)
....|++++-.|-.-+ -..-+..+.++|+.||.+++..-..........+..+|+++
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~ 230 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKR 230 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHC
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhC
Confidence 3568888877664211 12336667778999999888654332111234567777664
No 121
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=20.44 E-value=1.2e+02 Score=26.81 Aligned_cols=62 Identities=6% Similarity=0.030 Sum_probs=35.0
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCccc
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSV 67 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~ 67 (259)
.+++++.|+++|+-|..--...-.+..++.|+.|-.||+= -|-. ......+-.+.++.|+.+
T Consensus 61 ~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~E-KPl~-~~ea~~l~~~A~~~g~~~ 122 (372)
T 4gmf_A 61 EQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQE-HPLH-PDDISSLQTLAQEQGCCY 122 (372)
T ss_dssp GGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEE-SCCC-HHHHHHHHHHHHHHTCCE
T ss_pred HHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEe-cCCC-HHHHHHHHHHHHHcCCEE
Confidence 3567899999999997422233356677777787777652 1211 001223445555666655
No 122
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=20.33 E-value=60 Score=27.88 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=42.2
Q ss_pred hhcC--CccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHh-CcccC
Q psy15702 5 ELLR--AASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQY-GVSVN 68 (259)
Q Consensus 5 ~ip~--~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~-Gi~~~ 68 (259)
++|+ .+|+.||.-|. +.-.+.+++-++.|=+.++.+.++-.......+-..++++ |+.+-
T Consensus 65 el~~~~~vD~avI~vP~----~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 65 EAKEQTGATASVIYVPP----PFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp HHHHHHCCCEEEECCCH----HHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEE
T ss_pred HhhhcCCCCEEEEecCH----HHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEE
Confidence 5677 89999999883 5667888888999988877777754210011466777788 88753
No 123
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=20.22 E-value=89 Score=27.97 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=36.4
Q ss_pred cCCccEEEEcCCCCC--CCHHHHH-HHHHHH--HcCCcEEEEecCCC-CCCCCccHHHHHHHhCcccCC
Q psy15702 7 LRAASLFICTGPREQ--FTITELN-SLKTYL--DEGGSLLIALGEEG-ERGSSTNINFLLEQYGVSVNS 69 (259)
Q Consensus 7 p~~advLVI~~P~~~--fs~~E~~-~L~~fl--~~GG~llv~~~~~~-~~~~~~nln~LL~~~Gi~~~~ 69 (259)
..+|+.|||++|+.. ..+ .+. .|.... ...||...+++..+ .......+.+.|++.|+++-.
T Consensus 317 i~~~~~ivlGspT~~~~~~p-~~~~~l~~l~~~~~~~K~~~~FGSyGWsg~a~~~~~~~l~~~~~~~v~ 384 (410)
T 4dik_A 317 IPDSEALIFGVSTYEAEIHP-LMRFTLLEIIDKANYEKPVLVFGVHGWAPSAERTAGELLKETKFRILS 384 (410)
T ss_dssp STTCSEEEEEECCTTSSSCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCTTSCCHHHHHTTSSCEEEE
T ss_pred HHhCCeEEEEeCCcCCcCCH-HHHHHHHHHHhcccCCCEEEEEECCCCCcHHHHHHHHHHHHCCCEEEC
Confidence 357999999999842 112 222 222222 23455555445432 222467899999999987643
No 124
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=20.04 E-value=77 Score=24.61 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=29.5
Q ss_pred CCccEEEEcCCCCCCCHHH----HHHHHHHHHcCCcEEEEe
Q psy15702 8 RAASLFICTGPREQFTITE----LNSLKTYLDEGGSLLIAL 44 (259)
Q Consensus 8 ~~advLVI~~P~~~fs~~E----~~~L~~fl~~GG~llv~~ 44 (259)
...|+++....-..+.+.+ +..+.+.|+.||.+++..
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6789999887766677664 678888899999988874
No 125
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=20.02 E-value=21 Score=30.40 Aligned_cols=61 Identities=15% Similarity=0.094 Sum_probs=41.3
Q ss_pred hhhcCCccEEEEcCCCCCCCHHHHHHHHHHHHcCCcEEEEecCCCCCCCCccHHHHHHHhCcccCCceee
Q psy15702 4 PELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVSVNSDCVV 73 (259)
Q Consensus 4 ~~ip~~advLVI~~P~~~fs~~E~~~L~~fl~~GG~llv~~~~~~~~~~~~nln~LL~~~Gi~~~~~~V~ 73 (259)
..++++||++||.|-+ +-...+..|.+.. +.++.+++++|... -+..|+ +||+..-.+.++
T Consensus 181 ~~~lp~~D~viiTgst--lvN~Tl~~lL~~~-~~a~~vvl~GPStp-----~~P~lf-~~Gv~~laG~~V 241 (270)
T 3l5o_A 181 EFILPECDYVYITCAS--VVDKTLPRLLELS-RNARRITLVGPGTP-----LAPVLF-EHGLQELSGFMV 241 (270)
T ss_dssp HHHGGGCSEEEEETHH--HHHTCHHHHHHHT-TTSSEEEEESTTCC-----CCGGGG-GTTCSEEEEEEE
T ss_pred HHhhccCCEEEEEeeh--hhcCCHHHHHhhC-CCCCEEEEECCCch-----hhHHHH-hcCcCEEEEEEE
Confidence 3578999999999875 4445555555555 34566777888753 223344 699998877666
No 126
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=25.15 E-value=22 Score=28.39 Aligned_cols=65 Identities=12% Similarity=0.211 Sum_probs=37.7
Q ss_pred hcCCccEEEEcCCCCCCCHH-HHHHHHHHHHc------CCc-EEEEecCCC---CCCCCccHHHHHHHhCcccCCc
Q psy15702 6 LLRAASLFICTGPREQFTIT-ELNSLKTYLDE------GGS-LLIALGEEG---ERGSSTNINFLLEQYGVSVNSD 70 (259)
Q Consensus 6 ip~~advLVI~~P~~~fs~~-E~~~L~~fl~~------GG~-llv~~~~~~---~~~~~~nln~LL~~~Gi~~~~~ 70 (259)
....||.+||+.|...++-. .++..-+++.+ .|| +.++.-.++ .......+..+|..+|+.+-+.
T Consensus 70 ~i~~AD~iIi~tP~Y~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~tsgg~~g~~~a~~~Lr~~l~~lg~~~v~~ 145 (199)
T 3s2y_A 70 QIATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMIGGARAQYHLRQSLVFLDAYVLNR 145 (199)
Confidence 45789999999998655432 34444444432 244 333332211 1123466788888888876543
Done!