Your job contains 1 sequence.
>psy15702
MITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLL
EQYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVTEDSLASSLHFVYPY
GASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYLEREEND
KMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVLDDYTRF
FSLDLSKVDMSTVPLDQWL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15702
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F6QN63 - symbol:IFT52 "Uncharacterized protein"... 658 1.4e-64 1
RGD|1311004 - symbol:Ift52 "intraflagellar transport 52 h... 649 1.2e-63 1
MGI|MGI:2387217 - symbol:Ift52 "intraflagellar transport ... 645 3.3e-63 1
UNIPROTKB|F1SDT5 - symbol:IFT52 "Uncharacterized protein"... 644 4.2e-63 1
ZFIN|ZDB-GENE-040614-3 - symbol:ift52 "intraflagellar tra... 641 8.8e-63 1
UNIPROTKB|E1BZM9 - symbol:IFT52 "Uncharacterized protein"... 630 1.3e-61 1
UNIPROTKB|Q9Y366 - symbol:IFT52 "Intraflagellar transport... 627 2.7e-61 1
UNIPROTKB|Q946G4 - symbol:BLD1 "Intraflagellar transport ... 505 2.3e-48 1
FB|FBgn0031829 - symbol:osm-6 "osm-6" species:7227 "Droso... 443 8.4e-42 1
WB|WBGene00003886 - symbol:osm-6 species:6239 "Caenorhabd... 412 1.6e-38 1
>UNIPROTKB|F6QN63 [details] [associations]
symbol:IFT52 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0044292 "dendrite terminus" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032391 "photoreceptor connecting cilium" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001841 "neural tube
formation" evidence=IEA] GO:GO:0001947 GO:GO:0009953 GO:GO:0045862
GO:GO:0042733 GO:GO:0007224 GO:GO:0044292 GO:GO:0032391
GO:GO:0001841 OMA:EDIHLNQ InterPro:IPR019196 Pfam:PF09822
GeneTree:ENSGT00390000011581 EMBL:DAAA02036693 EMBL:DAAA02036694
IPI:IPI00685787 Ensembl:ENSBTAT00000026122 Uniprot:F6QN63
Length = 440
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 131/260 (50%), Positives = 177/260 (68%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
ITPE L L+I GPRE+FT E LK YLD GG +L+ LGE GE TNINFLLE
Sbjct: 45 ITPEKLIGVKLWITAGPREKFTAAEFEILKKYLDGGGDILVMLGEGGESRFDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT----EDSL---ASSL 114
+YG+ VN+D VVR +YKYFHPKE + NGVLNR I+ A + V E+S A +L
Sbjct: 105 EYGIMVNNDAVVRNVYYKYFHPKEALVSNGVLNREISRAAGKAVPGILDEESSGNNAQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYL 174
FVYP+GA+L+V KP+V V STGS PLNRP+++FY K +GGKL VLGS +FSDQYL
Sbjct: 165 TFVYPFGATLSVTKPAVAVLSTGSVCFPLNRPILAFYHSKNQGGKLAVLGSCHMFSDQYL 224
Query: 175 EREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVL 234
++EEN K+ ++ +L T+DI+LNQIDA+D +++DY ++P+ + +L+ L E E
Sbjct: 225 DKEENSKIMDVVFRWLTTEDIHLNQIDAEDPEISDYMMLPDTAALSERLRVCLQEGDENP 284
Query: 235 DDYTRFFSLDLSKVDMSTVP 254
D+T F L L ++D +++P
Sbjct: 285 RDFTSLFDLSLYQLDTTSLP 304
>RGD|1311004 [details] [associations]
symbol:Ift52 "intraflagellar transport 52 homolog
(Chlamydomonas)" species:10116 "Rattus norvegicus" [GO:0001841
"neural tube formation" evidence=ISO] [GO:0001947 "heart looping"
evidence=ISO] [GO:0007224 "smoothened signaling pathway"
evidence=ISO] [GO:0007368 "determination of left/right symmetry"
evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISO] [GO:0032391 "photoreceptor connecting cilium"
evidence=ISO] [GO:0042733 "embryonic digit morphogenesis"
evidence=ISO] [GO:0044292 "dendrite terminus" evidence=ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=ISO]
RGD:1311004 InterPro:IPR019196 Pfam:PF09822 IPI:IPI00950525
Ensembl:ENSRNOT00000064649 UCSC:RGD:1311004 ArrayExpress:E9PT02
Uniprot:E9PT02
Length = 370
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 132/261 (50%), Positives = 176/261 (67%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
IT E L L+I GPRE+FT E LK YLD GG +L+ LGE GE TNINFLLE
Sbjct: 45 ITSEKLIGVKLWITAGPREKFTAAEFEVLKKYLDSGGDILVMLGEGGESRFDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT-----EDS--LASSL 114
+YG+ VN+D VVR +YKYFHPKE + +GVLNR I+ A + V E+S A +L
Sbjct: 105 EYGIMVNNDAVVRNVYYKYFHPKEALVSDGVLNREISRAAGKAVPGVIDEENSGNNAQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRG-GKLVVLGSAALFSDQY 173
FVYPYGA+L+V+KP+V V STGS PLNRP+++FY K +G GKL VLGS +FSDQY
Sbjct: 165 TFVYPYGATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGFGKLAVLGSCHMFSDQY 224
Query: 174 LEREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEV 233
L++EEN K+ ++ +L T DI+LNQIDA+D +++DYT+VP+ + QL+ L E E
Sbjct: 225 LDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISDYTMVPDTATLSEQLRVCLQEGDEN 284
Query: 234 LDDYTRFFSLDLSKVDMSTVP 254
D+T F L + ++D + +P
Sbjct: 285 PRDFTTLFDLSIYQLDTTCLP 305
>MGI|MGI:2387217 [details] [associations]
symbol:Ift52 "intraflagellar transport 52" species:10090
"Mus musculus" [GO:0001841 "neural tube formation" evidence=IMP]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0007224 "smoothened signaling
pathway" evidence=IMP] [GO:0007368 "determination of left/right
symmetry" evidence=IMP] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0032391 "photoreceptor connecting
cilium" evidence=IDA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IMP] [GO:0044292 "dendrite terminus" evidence=IDA]
[GO:0045862 "positive regulation of proteolysis" evidence=IMP]
MGI:MGI:2387217 GO:GO:0001947 GO:GO:0009953 GO:GO:0045862
GO:GO:0042733 GO:GO:0007224 GO:GO:0044292 GO:GO:0032391
GO:GO:0001841 CTD:51098 eggNOG:NOG237115 HOVERGEN:HBG023562
OrthoDB:EOG4NGGMQ InterPro:IPR019196 Pfam:PF09822 EMBL:L38481
EMBL:AK088467 EMBL:AK144188 EMBL:AK167194 EMBL:BC037708
IPI:IPI00459776 RefSeq:NP_742162.2 UniGene:Mm.34034
ProteinModelPortal:Q62559 SMR:Q62559 STRING:Q62559
PhosphoSite:Q62559 PaxDb:Q62559 PRIDE:Q62559
Ensembl:ENSMUST00000018002 GeneID:245866 KEGG:mmu:245866
GeneTree:ENSGT00390000011581 HOGENOM:HOG000231020 InParanoid:Q62559
OMA:SEQLRVC NextBio:386972 Bgee:Q62559 Genevestigator:Q62559
GermOnline:ENSMUSG00000017858 Uniprot:Q62559
Length = 426
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 131/261 (50%), Positives = 176/261 (67%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
IT E L L+I GPRE+FT E LK YLD GG +L+ LGE GE TNINFLLE
Sbjct: 45 ITSEKLIGVKLWITAGPREKFTAAEFEVLKKYLDSGGDILVMLGEGGESRFDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT-----EDS--LASSL 114
+YG+ VN+D VVR +YKYFHPKE + +GVLNR I+ A + V E+S A +L
Sbjct: 105 EYGIMVNNDAVVRNVYYKYFHPKEALVSDGVLNREISRAAGKAVPGVIDEENSGNNAQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRG-GKLVVLGSAALFSDQY 173
FVYP+GA+L+V+KP+V V STGS PLNRP+++FY K +G GKL VLGS +FSDQY
Sbjct: 165 TFVYPFGATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGFGKLAVLGSCHMFSDQY 224
Query: 174 LEREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEV 233
L++EEN K+ ++ +L T DI+LNQIDA+D +++DYT+VP+ + QL+ L E E
Sbjct: 225 LDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISDYTMVPDTATLSEQLRVCLQEGDEN 284
Query: 234 LDDYTRFFSLDLSKVDMSTVP 254
D+T F L + ++D + +P
Sbjct: 285 PRDFTTLFDLSIYQLDTTCLP 305
>UNIPROTKB|F1SDT5 [details] [associations]
symbol:IFT52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0044292 "dendrite terminus" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0032391 "photoreceptor connecting cilium" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001841 "neural tube
formation" evidence=IEA] GO:GO:0001947 GO:GO:0009953 GO:GO:0045862
GO:GO:0042733 GO:GO:0007224 GO:GO:0044292 GO:GO:0032391
GO:GO:0001841 OMA:EDIHLNQ InterPro:IPR019196 Pfam:PF09822
GeneTree:ENSGT00390000011581 EMBL:CU302397
Ensembl:ENSSSCT00000008060 Uniprot:F1SDT5
Length = 440
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 129/260 (49%), Positives = 174/260 (66%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
IT E L L+I GPRE+FT E LK YLD GG +L+ LGE GE TNINFLLE
Sbjct: 45 ITSEKLIGVKLWITAGPREKFTAAEFEVLKKYLDGGGDILVMLGEGGESRFDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT----EDSL---ASSL 114
+YG+ VN+D VVR +YKYFHPKE + +GVLNR I+ A + V E+S A +L
Sbjct: 105 EYGIMVNNDAVVRNVYYKYFHPKEALVSDGVLNREISRAAGKAVPGIIDEESSGNNAQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYL 174
FVYP+GA+LNV+KP+V V STGS PLNRP+++FY K +GGKL VLGS +FSDQYL
Sbjct: 165 TFVYPFGATLNVMKPAVAVLSTGSVCFPLNRPILAFYHSKDQGGKLAVLGSCHMFSDQYL 224
Query: 175 EREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVL 234
++EEN K+ ++ +L DI LNQIDA+D +++DY +VP+ + +L+ L E E
Sbjct: 225 DKEENSKIMDVVFQWLTAGDIQLNQIDAEDPEISDYMMVPDTATLSERLRVCLQEGDENP 284
Query: 235 DDYTRFFSLDLSKVDMSTVP 254
D+T F L + ++D +++P
Sbjct: 285 RDFTTLFDLSIYQLDTTSLP 304
>ZFIN|ZDB-GENE-040614-3 [details] [associations]
symbol:ift52 "intraflagellar transport protein 52"
species:7955 "Danio rerio" [GO:0042073 "intraflagellar transport"
evidence=IDA] [GO:0005930 "axoneme" evidence=IDA] [GO:0005932
"microtubule basal body" evidence=IDA] ZFIN:ZDB-GENE-040614-3
GO:GO:0005932 GO:GO:0042073 GO:GO:0005930 HOVERGEN:HBG023562
InterPro:IPR019196 Pfam:PF09822 EMBL:AY600455 IPI:IPI00619412
UniGene:Dr.15827 STRING:Q6J503 InParanoid:Q6J503
ArrayExpress:Q6J503 Uniprot:Q6J503
Length = 435
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 128/260 (49%), Positives = 177/260 (68%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
+T E L+ L+I GPRE+FT EL LK YLD GG+LL+ LGE GE TNINFLLE
Sbjct: 45 LTLEKLQGVKLWITAGPREKFTAAELEVLKQYLDSGGALLVMLGEGGELKYDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT----EDSLASS---L 114
++G+ VN+D V+R +YKYFHPKE + NGVLNR I+ A + VT E++ ++ L
Sbjct: 105 EFGIMVNNDAVIRNVYYKYFHPKEALVSNGVLNREISRAAGKVVTGVIDEENTGNNSQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYL 174
FVYPYGA+LNV+KP+V + STGS PLNRPV++F+ K GKL VLGS +FSDQYL
Sbjct: 165 TFVYPYGATLNVMKPAVAILSTGSVCFPLNRPVLAFHHSKN-AGKLAVLGSCHMFSDQYL 223
Query: 175 EREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVL 234
++EEN ++ ++ +L TD I+LNQIDA+D ++TDY ++P+ + +L+ L E E
Sbjct: 224 DKEENSRIMDVVFQWLTTDSIHLNQIDAEDPEITDYMMLPDTGSLSERLRVCLQEGDENP 283
Query: 235 DDYTRFFSLDLSKVDMSTVP 254
D+T F + L K+ +T+P
Sbjct: 284 RDFTSLFDMSLLKLHTNTLP 303
>UNIPROTKB|E1BZM9 [details] [associations]
symbol:IFT52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0032391 "photoreceptor
connecting cilium" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0044292 "dendrite terminus"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] GO:GO:0045862 GO:GO:0007224 GO:GO:0044292
GO:GO:0032391 InterPro:IPR019196 Pfam:PF09822
GeneTree:ENSGT00390000011581 OMA:SEQLRVC EMBL:AADN02019400
IPI:IPI00601850 Ensembl:ENSGALT00000005577 ArrayExpress:E1BZM9
Uniprot:E1BZM9
Length = 437
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 122/260 (46%), Positives = 178/260 (68%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
IT E L L+I GPRE+F+ E LK +L++GG++L+ L E GE S TNINFLLE
Sbjct: 45 ITSEKLFGVKLWITAGPREKFSAAEFLVLKKFLEDGGAILVMLREGGESRSGTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVTEDSL-------ASSL 114
+YG+ N+D VVR +YKY+HPKE I +GVLNRGI+EA + V E + + +L
Sbjct: 105 EYGIVFNNDAVVRNVYYKYYHPKEALISDGVLNRGISEAARKTVLETTGEDGNGHDSQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYL 174
FVYP+GA+LNV++P+V V STGS PLNRP+++FY+ +++GGK+ LGS +FSDQYL
Sbjct: 165 TFVYPFGATLNVMRPAVAVLSTGSVCFPLNRPILAFYQHESQGGKMAALGSCHMFSDQYL 224
Query: 175 EREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVL 234
++EEN K+ ++ +L T DI+LNQ+D +D +++DYTL+P+ + QL+ L E E
Sbjct: 225 DKEENGKIMDVLFQWLTTSDIHLNQMDMEDPEISDYTLLPDTAALSEQLRVCLQEGDENP 284
Query: 235 DDYTRFFSLDLSKVDMSTVP 254
D+T+ F L ++D + +P
Sbjct: 285 RDFTKLFDTSLYQLDTTALP 304
>UNIPROTKB|Q9Y366 [details] [associations]
symbol:IFT52 "Intraflagellar transport protein 52 homolog"
species:9606 "Homo sapiens" [GO:0001841 "neural tube formation"
evidence=IEA] [GO:0001947 "heart looping" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0032391
"photoreceptor connecting cilium" evidence=IEA] [GO:0042733
"embryonic digit morphogenesis" evidence=IEA] [GO:0044292 "dendrite
terminus" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0031514 "motile cilium" evidence=ISS] [GO:0030992
"intraflagellar transport particle B" evidence=ISS] EMBL:CH471077
GO:GO:0009434 GO:GO:0008022 GO:GO:0001947 GO:GO:0009953
GO:GO:0045862 GO:GO:0042733 GO:GO:0007224 GO:GO:0044292
GO:GO:0032391 GO:GO:0001841 EMBL:AL121886 GO:GO:0030992
EMBL:AF151811 EMBL:AK001436 EMBL:Z98752 EMBL:BC039831
IPI:IPI00006535 RefSeq:NP_057088.2 UniGene:Hs.444332
ProteinModelPortal:Q9Y366 STRING:Q9Y366 PhosphoSite:Q9Y366
DMDM:116242524 PaxDb:Q9Y366 PRIDE:Q9Y366 DNASU:51098
Ensembl:ENST00000373030 Ensembl:ENST00000373039 GeneID:51098
KEGG:hsa:51098 UCSC:uc002xkw.3 CTD:51098 GeneCards:GC20P042219
HGNC:HGNC:15901 neXtProt:NX_Q9Y366 PharmGKB:PA25796
eggNOG:NOG237115 HOVERGEN:HBG023562 InParanoid:Q9Y366 OMA:EDIHLNQ
OrthoDB:EOG4NGGMQ PhylomeDB:Q9Y366 GenomeRNAi:51098 NextBio:53801
Bgee:Q9Y366 CleanEx:HS_IFT52 Genevestigator:Q9Y366
GermOnline:ENSG00000101052 InterPro:IPR019196 Pfam:PF09822
Uniprot:Q9Y366
Length = 437
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 124/258 (48%), Positives = 172/258 (66%)
Query: 2 ITPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLE 61
IT E L L+I GPRE+FT E LK YLD GG + + LGE GE TNINFLLE
Sbjct: 45 ITSEKLNGVKLWITAGPREKFTAAEFEILKKYLDTGGDVFVMLGEGGESRFDTNINFLLE 104
Query: 62 QYGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVT----EDSL---ASSL 114
+YG+ VN+D VVR ++KYFHPKE + +GVLNR I+ A + V E+S A +L
Sbjct: 105 EYGIMVNNDAVVRNVYHKYFHPKEALVSSGVLNREISRAAGKAVPGIIDEESSGNNAQAL 164
Query: 115 HFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYL 174
FVYP+GA+L+V+KP+V V STGS PLNRP+++FY K +GGKL VLGS +FSDQYL
Sbjct: 165 TFVYPFGATLSVMKPAVAVLSTGSVCFPLNRPILAFYHSKNQGGKLAVLGSCHMFSDQYL 224
Query: 175 EREENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEFQEVL 234
++EEN K+ ++ +L T DI+LNQIDA+D +++DY ++P + + + L E E+
Sbjct: 225 DKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISDYMMLPYTATLSKRNRECLQESDEIP 284
Query: 235 DDYTRFFSLDLSKVDMST 252
D+T F L + ++D ++
Sbjct: 285 RDFTTLFDLSIFQLDTTS 302
>UNIPROTKB|Q946G4 [details] [associations]
symbol:BLD1 "Intraflagellar transport protein IFT52"
species:3055 "Chlamydomonas reinhardtii" [GO:0005515 "protein
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0030992 "intraflagellar transport particle B"
evidence=IDA] [GO:0031514 "motile cilium" evidence=IDA]
GO:GO:0009434 GO:GO:0030992 InterPro:IPR019196 Pfam:PF09822
OMA:SEQLRVC EMBL:DS496122 EMBL:AF397450 RefSeq:XP_001692161.1
UniGene:Cre.13400 STRING:Q946G4 EnsemblPlants:EDP04111
GeneID:5717848 KEGG:cre:CHLREDRAFT_24116 ProtClustDB:CLSN2702752
Uniprot:Q946G4
Length = 454
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 108/266 (40%), Positives = 161/266 (60%)
Query: 3 TPELLRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQ 62
T + LR+A + + GP+E+FT E++ LK ++ GGS+LI + E GE + TNIN+ LEQ
Sbjct: 49 TLDTLRSAHILVLGGPKEKFTAPEVDMLKKFVKNGGSILILMSEGGEEKAGTNINYFLEQ 108
Query: 63 YGVSVNSDCVVRCHFYKYFHPKECFIGNGVLNR----GIAEALHRDVTEDSLAS------ 112
+G+SVN+D VVR YKY HPKE I +G+LNR G ++L+ + ++ S
Sbjct: 109 FGMSVNNDAVVRTTHYKYLHPKEVLISDGILNRAVITGAGKSLNSNDDDEFRVSRGPQAF 168
Query: 113 ---SLHFVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALF 169
L +V+P+GA+L+V KP+VPV S+G + P+NRPV + + G ++ VLGS A+F
Sbjct: 169 DGTGLEYVFPFGATLSVQKPAVPVLSSGKIAYPMNRPVGAVWAQPGYG-RIAVLGSCAMF 227
Query: 170 SDQYLEREENDKMRQIILSFLLTDD-INLNQIDADDADVTDYTLVPEIRYTAAQLKSTLM 228
D++L++EEN K+ FL I LN IDA++ DV+D L+P+ A +LK L
Sbjct: 228 DDKWLDKEENSKIMDFFFKFLKPHSKIQLNDIDAEEPDVSDLKLLPDTASLADKLKGCLQ 287
Query: 229 EFQEVLDDYTRFFSLDLSKVDMSTVP 254
E +V D+T F L K D +P
Sbjct: 288 EIDDVPRDWTSLFDDSLFKFDTGLIP 313
>FB|FBgn0031829 [details] [associations]
symbol:osm-6 "osm-6" species:7227 "Drosophila melanogaster"
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0042384 "cilium
assembly" evidence=ISM] GO:GO:0005871 EMBL:AE014134 GO:GO:0042384
GO:GO:0003777 GO:GO:0007018 eggNOG:NOG237115 OMA:EDIHLNQ
GeneTree:ENSGT00390000011581 CTD:33917 RefSeq:NP_609045.1
UniGene:Dm.18276 ProteinModelPortal:Q9VMC0 SMR:Q9VMC0 IntAct:Q9VMC0
MINT:MINT-283088 STRING:Q9VMC0 PRIDE:Q9VMC0
EnsemblMetazoa:FBtr0079333 GeneID:33917 KEGG:dme:Dmel_CG9595
UCSC:CG9595-RA FlyBase:FBgn0031829 InParanoid:Q9VMC0
OrthoDB:EOG4TDZ1H PhylomeDB:Q9VMC0 GenomeRNAi:33917 NextBio:785908
ArrayExpress:Q9VMC0 Bgee:Q9VMC0 Uniprot:Q9VMC0
Length = 410
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 90/255 (35%), Positives = 155/255 (60%)
Query: 5 ELLRAASLFICTGPREQFTITELNSLKTYLD-EGGSLLIALGEEGERGSSTNINFLLEQY 63
E L +F+ GP+++FT E + LK Y++ +GGSL++ LGE GE +TN+NF LEQY
Sbjct: 22 ERLARVKIFVLAGPQDRFTEDEFDVLKHYVEVQGGSLVVLLGEGGEPEFNTNVNFFLEQY 81
Query: 64 GVSVNSDCVVRCHFYKYFHPKECFIGNGVLNRGI--------AEALHRDVTEDSLASSLH 115
G+ +N D VVR H+YK FHPKEC +G GV+ + E ++ D +++ +H
Sbjct: 82 GIYINGDTVVRPHYYKNFHPKECIVGGGVVCESMWRHLLKLDIEKVYYDFSDEKY--KIH 139
Query: 116 FVYPYGASLNVIKPSVPVFSTGSASCPLNRPVVSFYRDKTRGGKLVVLGSAALFSDQYLE 175
F YPYGA+LNV +P+ + +TG P NRP+V ++ + +GGK++ +GS ++ D+YL+
Sbjct: 140 FQYPYGATLNVSEPANVLLTTGPVVYPFNRPLVGYFTNG-KGGKILAVGSGYIWHDKYLQ 198
Query: 176 REENDKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEF--QEV 233
+ ND M + ++ L D+I + +D +D +++D +I + A K+ L++ ++
Sbjct: 199 DKTNDAMFEYLIKLLGGDEITYSHLDFNDVELSDNKHFTDIGFLADMPKACLIDSIGTDM 258
Query: 234 LDDYTRFFSLDLSKV 248
D+ + F + L ++
Sbjct: 259 PTDFKQMFDMRLCRL 273
>WB|WBGene00003886 [details] [associations]
symbol:osm-6 species:6239 "Caenorhabditis elegans"
[GO:0006970 "response to osmotic stress" evidence=IMP] [GO:0006935
"chemotaxis" evidence=IMP] [GO:0050954 "sensory perception of
mechanical stimulus" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0060271
"cilium morphogenesis" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=IDA] [GO:0035869 "ciliary transition zone"
evidence=IDA] GO:GO:0005737 GO:GO:0043025 GO:GO:0006935
GO:GO:0006970 GO:GO:0060271 GO:GO:0035869 GO:GO:0050954 EMBL:Z75954
InterPro:IPR019196 Pfam:PF09822 GeneTree:ENSGT00390000011581
OMA:SEQLRVC EMBL:Z75956 EMBL:AJ000259 RefSeq:NP_741633.1
UniGene:Cel.19661 ProteinModelPortal:G5EDF6 EnsemblMetazoa:R31.3
GeneID:179631 KEGG:cel:CELE_R31.3 CTD:33917 WormBase:R31.3
NextBio:906222 Uniprot:G5EDF6
Length = 472
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 91/259 (35%), Positives = 151/259 (58%)
Query: 7 LRAASLFICTGPREQFTITELNSLKTYLDEGGSLLIALGEEGERGSSTNINFLLEQYGVS 66
L + I P+ F E+ ++ +++EGGSL+I GE GER S +N ++ +YG++
Sbjct: 59 LEDVRMLIIPQPKTSFGTGEIEAIWKFVEEGGSLMILSGEGGERQS---LNEMIAKYGIT 115
Query: 67 VNSDCVVRCHFYKYFHPKECFIGNGVLNRGIAEALHRDVTEDSLASS--LHFVYPYGASL 124
VN D V+R F KYF PKE + NGV+NR IA A ++V+ + +S L F+YPYG +L
Sbjct: 116 VNKDSVIRTVFLKYFDPKEALVANGVINRAIAVAAKKNVSTEQKHNSQALSFIYPYGCTL 175
Query: 125 NVI-KPSVPVFSTGSASCPLNRPVVSFYRDKT----RGGKLVVLGSAALFSDQYLEREEN 179
+V + S V S+GS S P +RPV +F+ K + G++ V+GS ++F D Y+++EEN
Sbjct: 176 DVNNRMSNVVLSSGSTSFPTSRPVAAFHETKLNEMKKKGRVCVVGSVSMFHDTYIDKEEN 235
Query: 180 DKMRQIILSFLLTDDINLNQIDADDADVTDYTLVPEIRYTAAQLKSTLMEF---QEVLDD 236
K+ + FL+ + + LN IDA + ++ DYT +P+ + + Q+K + E Q + D
Sbjct: 236 GKIFDTFVEFLV-NGLELNTIDAAEPEINDYTNIPDHIHMSQQIKVCMYEGELDQAISSD 294
Query: 237 YTRFFSLDLSKVDMSTVPL 255
+ + L ++ P+
Sbjct: 295 FMKIMDTSLHSFNLKHWPM 313
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 259 0.00088 114 3 11 22 0.45 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 592 (63 KB)
Total size of DFA: 181 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.06u 0.18s 23.24t Elapsed: 00:00:01
Total cpu time: 23.06u 0.18s 23.24t Elapsed: 00:00:01
Start: Thu Aug 15 14:23:33 2013 End: Thu Aug 15 14:23:34 2013