BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15708
(87 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI T +REILA LDE L+ + LD MI+EID D SGTVDF+
Sbjct: 17 NGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 59
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI T +REILA LDE L+ + LD MI+EID D SGTVDF+
Sbjct: 105 NGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 147
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 6 DQEQINSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
D E G + T + IL L Q T + ++I+E D +G +DFD
Sbjct: 21 DFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFD 70
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 5 LDQEQINSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
LD+E+ G I LR IL +L ++LT D+++ MI E DTD SGTVD++
Sbjct: 16 LDKEK---KGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYE 63
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin
C In The Troponin C-Troponin I Complex
Length = 161
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
1 Structure
Length = 161
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L +++ L + TP++L EMI+E+D D SGTVDFD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 33.1 bits (74), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 107 NADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 14 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 58
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 21 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 20 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 43 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 17 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 18 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 17 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 389 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 317 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 93 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 101 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 31 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 91 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 21 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 99 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 29 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 69
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 97 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 27 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 67
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 93 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 93 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 23 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ +GYI + LR ++ L E+LT +++DEMI E D D G V++
Sbjct: 19 DGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 62
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 92 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 22 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 398 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 327 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 397 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 396 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 325 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 397 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 397 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 94 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 24 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 397 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 42.7 bits (99), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 397 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 326 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 396 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 325 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 396 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 34.3 bits (77), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 325 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+G+I + LR ++ L E+LT +++DEMI E D D G +++D
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYD 140
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 360 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 289 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 364 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 292 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 363 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 292 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E LT +++DEMI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E LT +++DEMI E D D G V+++
Sbjct: 95 DGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 92 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYE 136
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 22 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++D+MI E D D G V+++
Sbjct: 96 DGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E + D G V+++
Sbjct: 95 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI S LR ++ L E+LT +++++MI+E D D G V+++
Sbjct: 23 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR ++ L E+LT +++DEMI E + D G V+++
Sbjct: 90 DGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 21 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+G+I + LR ++ L E+LT +++DEMI E D D G ++++
Sbjct: 18 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI S LR ++ L E+LT +++++MI+E D D G V+++
Sbjct: 18 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 93 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 95 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+G+I + LR ++ L E+LT +++DEMI E D D G ++++
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 140
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + TP++L E I+E+D D SGTVDFD
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFD 75
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI + LR ++ L E+LT +++DEMI E D G V+++
Sbjct: 397 GNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYE 440
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+ D +GT+DF
Sbjct: 326 GGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+GYI S LR ++ L E+LT +++++MI+E D D G V+++
Sbjct: 97 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L ++ +LD+ T ++L +MI E+D D +GT++FD
Sbjct: 25 GCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G I + LR ++ L E+LT D++DEMI E D D G ++++
Sbjct: 20 DGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G+I + LR ++ L E+LT +++DEMI E D D G V+++
Sbjct: 96 DGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G I + LR ++ L E+LT D++DEMI E D D G ++++
Sbjct: 95 DGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 139
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G I + LR ++ L E+LT D++DEMI E D D G ++++
Sbjct: 95 DGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 139
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +G++ + LR ++ L E+L+ +++DEMI DTD G V+++
Sbjct: 95 DGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +M+ EID D +GTVDF
Sbjct: 25 GCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR + L E+LT +++DE I E D D G V+++
Sbjct: 95 DGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L + +L T +L + I E+D D +GT++F
Sbjct: 25 GTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR + L E+LT +++DE I E D D G V+++
Sbjct: 95 DGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYE 139
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L + +L + T +L + I E+D D +GT+DF
Sbjct: 25 GTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T +L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E +T + +++++++ D + G +DFD
Sbjct: 108 NADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 32 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E +T + +++++++ D + G +DFD
Sbjct: 105 NADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 149
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E + + +++++++ D + G +DFD
Sbjct: 108 NADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E +T + +++++++ D + G +DFD
Sbjct: 108 NADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E +T + +++++++ D + G +DFD
Sbjct: 108 NADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD 152
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ +GYI + LR + L E+LT +++D+ I E D D G V+++
Sbjct: 96 DGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYE 140
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L + +L + T +L + I E+D D +GT+DF
Sbjct: 26 GTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 24 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G+I + LR ++ L E++T +++DEMI E D D G ++++
Sbjct: 98 GFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L ++ +LD+ T ++L +MI E+D D +GT++FD
Sbjct: 25 GCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L ++ +LD+ T ++L +MI E+D D +GT++FD
Sbjct: 25 GCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 1 ADQDLDQEQINSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
A Q D+E S G + LR +L L E+LT ++DE+++ ++ D++G +D+
Sbjct: 10 AFQVFDKE---STGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 6 DQEQI------NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
D+E+I N G I +S L + L L +TPD++ M+ EIDTD G + FD
Sbjct: 12 DRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 32 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L EI A E +T ++++ ++++ D + G +DFD
Sbjct: 105 NADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L ++ L + T ++LD +IEE+D D SGT+DF+
Sbjct: 32 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFE 73
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L EI A E +T ++++ ++++ D + G +DFD
Sbjct: 105 NADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFD 149
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
S G + LR +L L E+LT ++DE+++ ++ D++G +D+
Sbjct: 96 STGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 138
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIPA 69
G+I + LR +L+ L E+L+ +++DE+I D D G V ++ EF ++ AG P
Sbjct: 97 GQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYE-EFVKKVMAGPYPD 155
Query: 70 R 70
+
Sbjct: 156 K 156
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 34.7 bits (78), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
N G I + L E L L +TPD++ M+ EIDTD G + F
Sbjct: 21 NGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISF 63
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G+I LR +A L + L ++LD MI E D D G V+++
Sbjct: 21 GHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYE 62
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIP 68
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG P
Sbjct: 94 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAGPYP 151
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIP 68
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG P
Sbjct: 95 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAGPYP 152
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIP 68
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG P
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAGPYP 154
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIPA 69
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG P
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAGPYPD 155
Query: 70 R 70
+
Sbjct: 156 K 156
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIP 68
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG P
Sbjct: 97 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAGPYP 154
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ G I L+ + AL + +++ +MI EID D SGT+DF+
Sbjct: 42 DGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L + T +L +MI E+D D GT+DF
Sbjct: 25 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I T L ++ L + T +LD +I E+D D SGT+DF+
Sbjct: 35 GDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIPA 69
G+I + LR +L+ L E+L+ +++DE+I D D G V ++ EF ++ G P
Sbjct: 98 GQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYE-EFVKKVMTGPYPD 156
Query: 70 R 70
+
Sbjct: 157 K 157
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAGSIPA 69
G+I + LR +L+ L E+L+ +++DE+I D D G V ++ EF ++ G P
Sbjct: 97 GQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYE-EFVKKVMTGPYPD 155
Query: 70 R 70
+
Sbjct: 156 K 156
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 27 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 19 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 22 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 18 NADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ GYI L+ +L A E +T D ++E++++ D + G +D+D
Sbjct: 17 NADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
G I L+ + AL + +++ +MI EID D SGT+DF+
Sbjct: 43 GTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 84
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I T L ++ +L T +L +MI E+D D +GT+DF
Sbjct: 25 GTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 11 NSHGYIPTSSLREILAAL-DEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I TS LRE + AL Q+ ++E+I ++D + G VDF+
Sbjct: 100 NGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFE 145
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
GYI L + + T +L E+ ++I+ + G VDFD
Sbjct: 26 GYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVD 53
G I +LR + L E LT ++L MIEE D D G ++
Sbjct: 111 GKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.0 bits (71), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G+I LRE+L + ++ T +++DEM E D G ++
Sbjct: 91 GFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNY 131
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTV 52
G I +L+ + L E LT ++L EMI+E D D G V
Sbjct: 94 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTV 52
G I +L+ + L E LT ++L EMI+E D D G V
Sbjct: 26 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N+ G+I L EIL A E + + +++++++ D + G +DFD
Sbjct: 22 NADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 66
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVD 53
G I +L+ + L E +T ++L EMI+E D D G V+
Sbjct: 96 GKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
+ G I L+ + AL + +++ +MI +ID D SGT+DF+
Sbjct: 20 DGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFE 64
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTV 52
G I +L+ + L E LT ++L EMI+E D D G V
Sbjct: 36 GKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 74
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 11 NSHGYIPTSSLREILAAL-DEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I TS LRE + L Q+ ++E+I ++D + G VDF+
Sbjct: 19 NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 64
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 31.2 bits (69), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDT--DASGTVDFDGEFDERQAAG 65
G+I + LR +L AL E+L+ + +DE+I+ D D G V ++ +F ++ AG
Sbjct: 94 GQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE-DFVKKVMAG 148
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 11 NSHGYIPTSSLREILAAL-DEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I TS LRE + L Q+ ++E+I ++D + G VDF+
Sbjct: 114 NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 159
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
GYI L + + T +L E+ ++I+ + G VDFD
Sbjct: 40 GYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 11 NSHGYIPTSSLREILAAL-DEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I TS LRE + L Q+ ++E+I ++D + G VDF+
Sbjct: 100 NGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFE 145
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
GYI L + + T +L E+ ++I+ + G VDFD
Sbjct: 26 GYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEF----DERQAAGSIPA 69
GYI +++ A D L +D+MI+EID D G +D+ GEF +R+ G I
Sbjct: 97 GYITLDEIQQ--ACKDFGLDDIHIDDMIKEIDQDNDGQIDY-GEFAAMMRKRKGNGGIGR 153
Query: 70 R 70
R
Sbjct: 154 R 154
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEF 58
++ G I L++ L + +L ++ ++++ D D SGT+D+ GEF
Sbjct: 22 DNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY-GEF 68
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 37 LDEMIEEIDTDASGTVDFDGEFDERQAAGS 66
L E+ + IDTD SGT+ FD D + GS
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGS 41
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEFDE 60
G I T L ++ + D + ++L+ +IE++D + G VDF+ EF E
Sbjct: 432 GKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN-EFVE 477
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I S L + L L + D++ M+ EIDTD G +DF+
Sbjct: 15 NGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFN 58
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G I S L + L L + D++ M+ EIDTD G +DF+
Sbjct: 14 NGDGKISLSELTDALRTLGST-SADEVQRMMAEIDTDGDGFIDFN 57
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVD 53
G I +LR + L E LT ++L IEE D D G ++
Sbjct: 111 GKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEIN 150
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTV 52
G I +L+ + L E LT ++L E I+E D D G V
Sbjct: 119 GKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEV 157
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 13 HGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I S L E+L ++ TP+++ M D +G VD+
Sbjct: 96 KGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPPDVAGNVDY 137
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 12 SHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G I S L E+L + TP+++ M D +G VD+
Sbjct: 108 GKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 150
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
GYI L++ L D P D ++++ID+D SG +D+
Sbjct: 67 GYITKEQLKKGLEK-DGLKLPYNFDLLLDQIDSDGSGKIDY 106
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
G+I L+ +L ++ P +EM E D +G + F
Sbjct: 21 GFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ G I S L E+L + TP+++ M D +G VD+
Sbjct: 89 DGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 132
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 11 NSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
N G + RE+ A T + + + EEID D +G ++ D
Sbjct: 13 NKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNAD 57
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D D G VDF
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDF 71
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 36 QLDEMIEEIDTDASGTVDF 54
+L +MI E+D D +GT+DF
Sbjct: 2 ELQDMINEVDADGNGTIDF 20
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 37 LDEMIEEIDTDASGTVDFD 55
LDEMIEE+D + G V F+
Sbjct: 47 LDEMIEEVDKNGDGEVSFE 65
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
pdb|2QZX|B Chain B, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
Length = 342
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 15 YIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
Y S +R IL A+ Q+ D + D SGT+DF
Sbjct: 225 YFTRSIVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDF 264
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEF 58
G I L++ L + +L ++ ++++ D D SGT+D+ GEF
Sbjct: 38 GTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY-GEF 81
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 37 LDEMIEEIDTDASGTVDFDGEFDERQAAGS 66
L E+ + IDTD SGT+ FD D + GS
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGS 54
>pdb|1ATT|A Chain A, Crystal Structure Of Cleaved Bovine Antithrombin Iii At
3.2 Angstroms Resolution
pdb|1ATT|B Chain B, Crystal Structure Of Cleaved Bovine Antithrombin Iii At
3.2 Angstroms Resolution
Length = 429
Score = 26.2 bits (56), Expect = 4.9, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 21 LREILAALDEQLTPDQLDEMIEEI 44
L + LA ++++LTPD L E ++E+
Sbjct: 285 LEKTLAKVEQELTPDMLQEWLDEL 308
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 23 EILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
E+ A Q P LD M++++D D+ G +DF
Sbjct: 44 ELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDF 75
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 34 PDQLDEMIEEIDTDASGTVDFD 55
P LDE+ EE+D + G V F+
Sbjct: 43 PSTLDELFEELDKNGDGEVSFE 64
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 34 PDQLDEMIEEIDTDASGTVDFD 55
P LDE+ EE+D + G V F+
Sbjct: 44 PSTLDELFEELDKNGDGEVSFE 65
>pdb|3PRH|A Chain A, Tryptophanyl-Trna Synthetase Val144pro Mutant From B.
Subtilis
pdb|3PRH|B Chain B, Tryptophanyl-Trna Synthetase Val144pro Mutant From B.
Subtilis
Length = 388
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 22 REILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGE 57
+ + LDE P QL++ I+ TD+ G V FD E
Sbjct: 235 KAYITLLDE---PKQLEKKIKSAVTDSEGIVKFDKE 267
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 32 LTPDQLDEMIEEIDTDASGTVDF 54
+ P D ++++ID+D SG +D+
Sbjct: 87 MLPPNFDLLLDQIDSDGSGNIDY 109
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 1 ADQDLDQEQINSHGYIPTSSLREILAALDEQ--LTPDQLDEMIEEIDTDASGTV 52
DQ LD + +GYI S + A+D + L+ ++L+ D+D SG +
Sbjct: 407 VDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSGKI 458
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 1 ADQDLDQEQINSHGYIPTSSLREILAALDEQ--LTPDQLDEMIEEIDTDASGTV 52
DQ LD + +GYI S + A+D + L+ ++L+ D+D SG +
Sbjct: 384 VDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSGKI 435
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 1 ADQDLDQEQINSHGYIPTSSLREILAALDEQ--LTPDQLDEMIEEIDTDASGTV 52
DQ LD + +GYI S + A+D + L+ ++L+ D+D SG +
Sbjct: 408 VDQVLDAVDFDKNGYIEYSEF--VTVAMDRKTLLSRERLERAFRMFDSDNSGKI 459
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D + G VDF
Sbjct: 28 LSKKQLKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 23 EILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEFDERQAAGSIPARG 71
E+ + LD Q D +D++++E+D + G VDF EF AA ++
Sbjct: 40 ELSSFLDVQKDADAVDKIMKELDENGDGEVDFQ-EFVVLVAALTVACNN 87
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D + G VDF
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D + G VDF
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D + G VDF
Sbjct: 29 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 72
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 16 IPTSSLREIL-----AALDEQLTPDQLDEMIEEIDTDASGTVDF 54
+ L+E+L LD Q D +D++++E+D + G VDF
Sbjct: 28 LSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|3LUY|A Chain A, Putative Chorismate Mutase From Bifidobacterium
Adolescentis
Length = 329
Score = 25.4 bits (54), Expect = 8.5, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 37 LDEMIEEIDTDASGTVDFDGEFDERQAAGSIPARGKIST 75
LD +I+ D V + EFD A G+ PA +I+T
Sbjct: 76 LDALIDAKDLVGFARVGVNVEFDAYVAQGADPAEARIAT 114
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 23 EILAALDEQLTPDQLDEMIEEIDTDASGTVDF 54
E+ A Q P LD M++++D ++ G +DF
Sbjct: 42 ELAAFTKNQKDPGVLDRMMKKLDLNSDGQLDF 73
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans
pdb|2H6T|A Chain A, Secreted Aspartic Proteinase (Sap) 3 From Candida Albicans
Complexed With Pepstatin A
Length = 340
Score = 25.4 bits (54), Expect = 9.2, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1 ADQDLDQEQINSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFDGEFDE 60
AD D+ + + Y+ ++++A + Q T D + +D + SG+VDF FD
Sbjct: 209 ADVDVLLDSGTTITYLQQGVADQVISAFNGQETYDANGNLFYLVDCNLSGSVDF--AFD- 265
Query: 61 RQAAGSIPA 69
+ A S+PA
Sbjct: 266 KNAKISVPA 274
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 25.4 bits (54), Expect = 9.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 2 DQDLDQEQINSHGYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTV 52
DQ LD + +GYI S + L+ ++L+ D+D SG +
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKI 435
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 25.0 bits (53), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 14 GYIPTSSLREILAALDEQLTPDQLDEMIEEIDTDASGTVDFD 55
GYI L + + T +L E+ ++I+ + G VDFD
Sbjct: 25 GYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.310 0.130 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,478,980
Number of Sequences: 62578
Number of extensions: 87273
Number of successful extensions: 484
Number of sequences better than 100.0: 194
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 210
Number of HSP's gapped (non-prelim): 284
length of query: 87
length of database: 14,973,337
effective HSP length: 55
effective length of query: 32
effective length of database: 11,531,547
effective search space: 369009504
effective search space used: 369009504
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 45 (21.9 bits)