BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15709
(121 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + +++
Sbjct: 319 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 379 DTDS-EEEIREAFRVFDKD 396
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 392 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+ELKEAFR++DK+
Sbjct: 78 DTDS-EEELKEAFRVFDKD 95
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +V+ ++++EEF+QV
Sbjct: 91 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 15 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 74
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+ELKEAFR++DK+
Sbjct: 75 DTDS-EEELKEAFRVFDKD 92
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +V+ ++++EEF+QV
Sbjct: 88 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 141
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D EK LKEAFR++DK+
Sbjct: 78 DTDSEEK-LKEAFRVFDKD 95
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +V+ ++++EEF+QV
Sbjct: 91 VFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKEETHVSS 85
D D E+ELKEAFR++DK++ S
Sbjct: 79 DTDS-EEELKEAFRVFDKDQNGFIS 102
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKEETHVSS 85
D D E+ELKEAFR++DK++ S
Sbjct: 79 DTDS-EEELKEAFRVFDKDQNGFIS 102
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 22 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 81
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 82 DTDS-EEEIREAFRVFDKD 99
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 96 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 148
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFL 59
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+ L
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 20 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 79
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 80 DTDS-EEEIREAFRVFDKD 97
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 94 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 24 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 83
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 84 DTDS-EEEIREAFRVFDKD 101
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 97 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 150
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 91 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 91 VFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 91 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 93 FDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQM 145
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 17 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 76
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 77 DTDS-EEEIREAFRVFDKD 94
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVAC 56
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 90 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 145
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 319 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 379 DTDS-EEEIREAFRVFDKD 396
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 392 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 16 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 75
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 76 DTDS-EEEIREAFRVFDKD 93
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 89 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 16 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 75
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 76 DTDS-EEEIREAFRVFDKD 93
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 89 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 14 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 73
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 74 DTDS-EEEIREAFRVFDKD 91
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 87 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 140
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E N++ ++++EEF+Q+
Sbjct: 91 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 15 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 74
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 75 DTDS-EEEIREAFRVFDKD 92
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 88 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 141
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 285 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 344
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 345 DTDS-EEEIREAFRVFDKD 362
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 358 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 16 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 75
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 76 DTDS-EEEIREAFRVFDKD 93
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVAC 56
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 89 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 144
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 320 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 379
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 380 DTDS-EEEIREAFRVFDKD 397
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 393 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 446
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 285 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 344
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 345 DTDS-EEEIREAFRVFDKD 362
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 358 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 411
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 319 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 379 DTDS-EEEIREAFRVFDKD 396
Score = 33.1 bits (74), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 392 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 310 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMK 369
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 370 DTDS-EEEIREAFRVFDKD 387
Score = 36.2 bits (82), Expect = 0.005, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 383 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 436
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 282 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 341
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 342 DTDS-EEEIREAFRVFDKD 359
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 355 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 408
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 33.5 bits (75), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 91 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 144
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 318 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 378 DTDS-EEEIREAFRVFDKD 395
Score = 33.1 bits (74), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 391 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 14 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 73
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D +E++EAFR++DK+
Sbjct: 74 DTD--SEEIREAFRVFDKD 90
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E N++ ++++EEF+Q+
Sbjct: 86 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQM 139
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D E+E++EAFR++DK+
Sbjct: 78 DS---EEEIREAFRVFDKD 93
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G+I ++ T++ +LG + E+ +++EI+V+ +I F EFL + L+
Sbjct: 18 LFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 77
Query: 61 DDDVLEKELKEAFRLYDK 78
+D E+EL EAF+++DK
Sbjct: 78 SNDS-EQELLEAFKVFDK 94
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G+I ++ T++ +LG + E+ +++EI+V+ +I F EFL + L+
Sbjct: 18 LFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 77
Query: 61 DDDVLEKELKEAFRLYDK 78
+D E+EL EAF+++DK
Sbjct: 78 SNDS-EQELLEAFKVFDK 94
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEF 51
+FD G I +++ +L ++G + D E++ ++ E++ SG+ I+ ++F
Sbjct: 91 VFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGE-INIQQF 140
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G+I ++ T++ +LG + E+ +++EI+V+ +I F EFL + L+
Sbjct: 19 LFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 78
Query: 61 DDDVLEKELKEAFRLYDK 78
+D E+EL EAF+++DK
Sbjct: 79 SNDS-EQELLEAFKVFDK 95
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEF 51
+FD G I +++ +L ++G + D E++ ++ E++ SG+ I+ ++F
Sbjct: 92 VFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGE-INIQQF 141
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 319 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D E+E++EAFR++DK+
Sbjct: 379 YTDS-EEEIREAFRVFDKD 396
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 392 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 318 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
Query: 61 DDDVLEKELKEAFRLYDKE 79
D E+E++EAFR++DK+
Sbjct: 378 YTDS-EEEIREAFRVFDKD 395
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 391 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 318 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 377
Query: 61 DDDVLEKELKEAFRLYDKE 79
D E+E++EAFR++DK+
Sbjct: 378 YTDS-EEEIREAFRVFDKD 395
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 391 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 444
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKEETHVSS----RDVIV-VCHFLRDDDVQE 102
+ D E+EL EAF+++D++ + S R V+ + L DD+V E
Sbjct: 78 EQDS-EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKEETHVSS----RDVIV-VCHFLRDDDVQE 102
+ D E+EL EAF+++D++ + S R V+ + L DD+V E
Sbjct: 78 EQDS-EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDE 123
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 319 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D E+E++EAFR++DK+
Sbjct: 379 YTDS-EEEIREAFRVFDKD 396
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 392 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 445
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T+ +LG + EL+ I+E++ + I F EFL +
Sbjct: 19 LFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXK 78
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 79 DTDS-EEEIREAFRVFDKD 96
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G I ++R + LG + D E++ I E +++ ++++EEF+Q
Sbjct: 92 VFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T+ +LG + EL+ I+E++ + I F EFL +
Sbjct: 18 LFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G I ++R + LG + D E++ I E +++ ++++EEF+Q
Sbjct: 91 VFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I E++ T++ +L + EL+ +I E++ + I F+EFL + ++
Sbjct: 18 LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVK 77
Query: 61 DDDVLEKELKEAFRLYDKEET-HVSSRD----VIVVCHFLRDDDVQEKELKEA 108
D D E+ELKEAF+++DK++ ++S+ + +I + L D++V E+ +KEA
Sbjct: 78 DTDA-EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV-EQMIKEA 128
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I ++R ++ LG + D E+E +I E +++ ++++EEF+++
Sbjct: 91 VFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T+ +LG + EL+ I+E++ + I+F EFL +
Sbjct: 18 LFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDS-EEEIREAFRVFDKD 95
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G I ++R + LG + D E++ I E +++ ++++EEF+Q
Sbjct: 91 VFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDDVLEKELKEAFR 74
D D E+E++EAFR
Sbjct: 78 DTDS-EEEIREAFR 90
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G+I ++ T++ +LG + E+ +++EI+V+ I F EFL + L+
Sbjct: 19 LFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLK 78
Query: 61 DDDVLEKELKEAFRLYDK 78
+D E+EL EAF+++DK
Sbjct: 79 CNDS-EQELLEAFKVFDK 95
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEF 51
+FD G I +++ +L ++G + D E++ ++ E++ SG+ I+ ++F
Sbjct: 92 VFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGSGE-INIKQF 141
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I +++ T++ +LG + EL+ +I+E+ + I F +FL + ++
Sbjct: 319 LFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMK 378
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++ K+
Sbjct: 379 DTDS-EEEIREAFRVFGKD 396
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I ++ T++ +LG + EL ++ EI+ + + F EFL + ++
Sbjct: 18 LFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMK 77
Query: 61 DDDVLEKELKEAFRLYDKE 79
D D E+E++EAFR++DK+
Sbjct: 78 DTDN-EEEIREAFRVFDKD 95
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL++ FR++DK
Sbjct: 88 EDAKGKSEEELEDCFRIFDK 107
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL + FR++DK
Sbjct: 88 EDAKGKSEEELADCFRIFDK 107
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I+ E++ IL G + + ++E ++ + + + +I F+EFL++
Sbjct: 104 IFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKM 157
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 25 MFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 84
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL E FR++D+
Sbjct: 85 EDAKGKSEEELAECFRIFDR 104
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I+ E++ I G + D E+E+++ + + + +I F+EFL++
Sbjct: 101 IFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD+ GTI+ ++++ + LG E++ +I +I+ + I FEEFLQ+ +
Sbjct: 16 LFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMG 75
Query: 61 DDDVLEKELKEAFRLYDKEET-HVSSRDVIVVCHFLRDDDVQEKELKE 107
+ D E E+ +AFRL+D +ET +S +++ V L +++ ++EL+E
Sbjct: 76 ERDSRE-EIMKAFRLFDDDETGKISFKNLKRVAKEL-GENMTDEELQE 121
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I + ++ + LG + D EL+ +IDE + + +++ EEF ++
Sbjct: 89 LFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRI 142
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
FD G I ++ T++ TLG + EL+ +I E + +++F EF + +R+
Sbjct: 19 FDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRE 78
Query: 62 DDVLEKELKEAFRLYDK 78
D E+E++EAF+++D+
Sbjct: 79 TDT-EEEMREAFKIFDR 94
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL FR++DK
Sbjct: 88 EDAKGKSEEELANCFRIFDK 107
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 25 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 84
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL FR++DK
Sbjct: 85 EDAKGKSEEELANCFRIFDK 104
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL FR++DK
Sbjct: 88 EDAKGKSEEELANCFRIFDK 107
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FDS + G I KE ++T+L G ++ + +E + KI F EFL + ++
Sbjct: 14 LFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMK 73
Query: 61 DDDVLEKELKEAFRLYDKEETHVSSRDVI 89
E L++AFR +D E T + +
Sbjct: 74 -QTTSEDILRQAFRTFDPEGTGYIPKAAL 101
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 25 MFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 84
Query: 61 DD--DVLEKELKEAFRLYDK 78
+D E+EL E FR++D+
Sbjct: 85 EDAKGKSEEELAELFRIFDR 104
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I+ E++ I G + D E+E+++ + + + +I F+EFL++
Sbjct: 101 IFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD+ GTI+ ++++ + LG E++ +I EI+ E K++F +FL V +
Sbjct: 14 LFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS 73
Query: 61 DDDVLEKELKEAFRLYDKEET-HVSSRDVIVVC----HFLRDDDVQE 102
+ D E+ LK AF+L+D +ET +S +++ V L D+++QE
Sbjct: 74 EKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 119
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I + ++ + LG + D EL+ +IDE + + ++S +EFL++
Sbjct: 87 LFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 140
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD---DV 64
G + +++ IL LG + +IDE + I F+ F + FL ++ +
Sbjct: 29 GRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQ 88
Query: 65 LEKELKEAFRLYDKEETHVSSRDVI 89
+++EL+EAFRLYDKE S DV+
Sbjct: 89 MQQELREAFRLYDKEGNGYISTDVM 113
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
++D G I + +R IL L + +L+ +IDEI+ + + FEEF+ V
Sbjct: 99 LYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Query: 89 IVVCHFLRDD---DVQEKELKEAFRLYDKE 115
I+ FL ++ + ++EL+EAFRLYDKE
Sbjct: 74 IIGARFLGEEVNPEQMQQELREAFRLYDKE 103
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD+ GTI+ ++++ + LG E++ +I EI+ + I FEEFL + +
Sbjct: 36 LFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMG 95
Query: 61 DDDVLEKELKEAFRLYDKEETH-VSSRDVIVVCHFLRDDDVQEKELKEAFRLYDK 114
+ D E+ LK AFRL+D + + ++ +D+ V L +++ E+EL+E D+
Sbjct: 96 ERDSREEILK-AFRLFDDDNSGTITIKDLRRVAKEL-GENLTEEELQEMIAEADR 148
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD GTI + +R + LG + + EL+ +I E + ++I +EF+++
Sbjct: 109 LFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 162
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 DDD 63
D D
Sbjct: 78 DTD 80
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMWDK 106
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
Query: 61 D 61
D
Sbjct: 78 D 78
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKT 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMFDK 106
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 29 VELETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKE 79
EL+ +I+E++ + I F EFL + ++D D E+E++EAFR++DK+
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS-EEEIREAFRVFDKD 50
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I K+++ T + +LG+ ++VELE +I ++++ ++ FEEF+ +
Sbjct: 44 VFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMFDK 106
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMFDK 106
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMFDK 106
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMK 77
Query: 61 D 61
D
Sbjct: 78 D 78
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKT 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR++DK
Sbjct: 94 EEELSDLFRMFDK 106
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK 77
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMK 77
Query: 61 D 61
D
Sbjct: 78 D 78
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDDD--VL 65
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 66 EKELKEAFRLYDK 78
E+EL + FR+ DK
Sbjct: 94 EEELSDLFRMXDK 106
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL +
Sbjct: 19 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 75
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
+FD GTI +++ T++ +LG + EL+ +I+E++ + I F EFL +
Sbjct: 18 LFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR 74
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G+I ++ T++ +LG + E+ +++EI+V+ +I F EFL + L+
Sbjct: 18 LFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLK 77
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD 62
+D
Sbjct: 88 ED 89
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I + + T++ LG EL+ +I+E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD 62
+D
Sbjct: 88 ED 89
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
++D GTI +++ T++ +LG + EL+ +I+E++ + I F EFL + ++
Sbjct: 18 LYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARIMK 77
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD+ G I +++ T++ LG EL+ +I E++ + I FEEFL + ++
Sbjct: 28 MFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMVRQMK 87
Query: 61 DD 62
+D
Sbjct: 88 ED 89
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFL-- 59
FD K G I + + T+G+ ++EL + +IN+ G + F++F+++ L
Sbjct: 34 FDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 93
Query: 60 -RDDDVLEKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELKEAFR 110
D + KEL++AFR +D D ++ EL+EA R
Sbjct: 94 ETADMIGVKELRDAFREFDTNG----------------DGEISTSELREAMR 129
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 2 FDSGKRGTIEKEKVRTILNTL-GHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD+ G I ++R + L GH + ++E +I ++++ ++ FEEF+++
Sbjct: 111 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 164
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFL-- 59
FD K G I + + T+G+ ++EL + +IN+ G + F++F+++ L
Sbjct: 20 FDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79
Query: 60 -RDDDVLEKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELKEAFR 110
D + KEL++AFR +D D ++ EL+EA R
Sbjct: 80 ETADMIGVKELRDAFREFDTNG----------------DGEISTSELREAMR 115
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 2 FDSGKRGTIEKEKVRTILNTL-GHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD+ G I ++R + L GH + ++E +I ++++ ++ FEEF+++
Sbjct: 97 FDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 19/112 (16%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFL-- 59
FD K G I + + T+G+ ++EL + +IN+ G + F++F+++ L
Sbjct: 20 FDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA 79
Query: 60 -RDDDVLEKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELKEAFR 110
D + KEL++AFR +D D ++ EL+EA R
Sbjct: 80 ETADMIGVKELRDAFREFDTNG----------------DGEISTSELREAMR 115
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 2 FDSGKRGTIEKEKVRTILNTL-GHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD+ G I ++R + L GH + ++E +I ++++ ++ FEEF+++
Sbjct: 97 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G + KE ++ I LG DD EL ++ E + ++F FL + L
Sbjct: 14 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLS 69
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D++ET
Sbjct: 70 GTDS-EETIRNAFAMFDEQETK 90
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With
Mgadp:vanadate-Transition State
Length = 139
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G + KE ++ I LG DD EL ++ E + ++F FL + L
Sbjct: 15 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLS 70
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D++ET
Sbjct: 71 GTDS-EETIRNAFAMFDEQETK 91
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G + KE ++ I LG DD EL ++ E + ++F FL + L
Sbjct: 26 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLS 81
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D++ET
Sbjct: 82 GTDS-EETIRNAFAMFDEQETK 102
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G + KE ++ I LG DD EL ++ E + ++F FL + L
Sbjct: 15 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLS 70
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D++ET
Sbjct: 71 GTDS-EETIRNAFAMFDEQETK 91
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFL 52
MFD+ G I +++ T++ LG EL+ +I+E++ + I FEEFL
Sbjct: 17 MFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL 68
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G + KE ++ I LG DD EL ++ E + ++F FL + L
Sbjct: 12 MIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKLS 67
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D++ET
Sbjct: 68 GTDS-EETIRNAFAMFDEQETK 88
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 17 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 14 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 16 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 13 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 10 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 13 VFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 33/53 (62%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD + G I ++R ++ LG + D E+E +I E +++ ++++EEF+++
Sbjct: 18 FDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I ++R ++ LG + D E+E +I E +++ ++++EEF+++
Sbjct: 12 VFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 65 LEKELKEAFRLYDKEETHVSSRDVI 89
+++EL+EAFRLYDKE S DV+
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVM 25
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
++D G I + +R IL L + +L+ +IDEI+ + + FEEF+ V
Sbjct: 11 LYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 102 EKELKEAFRLYDKE 115
++EL+EAFRLYDKE
Sbjct: 2 QQELREAFRLYDKE 15
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD+ GTI+ ++++ + LG E++ +I EI+ + I FEEFL +
Sbjct: 38 LFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G I E++ T++ +L + EL+ +I E++ + I F+EFL + ++
Sbjct: 18 LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVK 77
Query: 61 D 61
D
Sbjct: 78 D 78
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G+I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDD 88
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 35/63 (55%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD+ K G+I+ +++ + LG + E+ +++E + E I F++FL + ++
Sbjct: 15 LFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKIK 74
Query: 61 DDD 63
+ D
Sbjct: 75 NRD 77
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
+FD+ GTI+ ++++ + LG E++ +I EI+ E K++F +FL V
Sbjct: 39 LFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQ 95
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 32.0 bits (71), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 31 LETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKE-ETHVSSRDVI 89
++ VID + + ++ F+EF++ F D E++L+ AFR+YD + + ++S+ ++
Sbjct: 41 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK-EQKLRFAFRIYDMDKDGYISNGELF 99
Query: 90 VVCHFLRDDDVQEKELKE 107
V + +++++ +L++
Sbjct: 100 QVLKMMVGNNLKDTQLQQ 117
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 31 LETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKE-ETHVSSRDVI 89
++ VID + + ++ F+EF++ F D E++L+ AFR+YD + + ++S+ ++
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK-EQKLRFAFRIYDMDKDGYISNGELF 98
Query: 90 VVCHFLRDDDVQEKELKE 107
V + +++++ +L++
Sbjct: 99 QVLKMMVGNNLKDTQLQQ 116
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 32.0 bits (71), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 31 LETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKE-ETHVSSRDVI 89
++ VID + + ++ F+EF++ F D E++L+ AFR+YD + + ++S+ ++
Sbjct: 55 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK-EQKLRFAFRIYDMDKDGYISNGELF 113
Query: 90 VVCHFLRDDDVQEKELKE 107
V + +++++ +L++
Sbjct: 114 QVLKMMVGNNLKDTQLQQ 131
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 31 LETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKE-ETHVSSRDVI 89
++ VID + + ++ F+EF++ F D E++L+ AFR+YD + + ++S+ ++
Sbjct: 54 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDK-EQKLRFAFRIYDMDKDGYISNGELF 112
Query: 90 VVCHFLRDDDVQEKELKE 107
V + +++++ +L++
Sbjct: 113 QVLKMMVGNNLKDTQLQQ 130
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+ D K+G I+ + +R IL +LG + + E+E +I E + + + +EEF C +
Sbjct: 15 VLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF---KCLMMS 71
Query: 61 DD 62
D
Sbjct: 72 SD 73
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 63 DVLEKELKEAFRLYDKEETHVSSRDVI 89
D+ E+ELKEAFR+ DKE+ V DV+
Sbjct: 3 DLDERELKEAFRVLDKEKKGVIKVDVL 29
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 15/17 (88%)
Query: 99 DVQEKELKEAFRLYDKE 115
D+ E+ELKEAFR+ DKE
Sbjct: 3 DLDERELKEAFRVLDKE 19
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 3 DSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
D G I ++R ++ LG + D E++ +I E +++ ++++EEF+Q+
Sbjct: 39 DKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D+ GTI ++++ L +G + + E++ ++D +++ I + EF+ H +
Sbjct: 18 MIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNK 77
Query: 61 DDDVLEKE--LKEAFRLYDKEET-HVSSRDVIVVCHFLRDDDV 100
LE+E L AF +DK+ + +++ ++ C DD+
Sbjct: 78 ----LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDI 116
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+EFL + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDD 88
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G + E++ + L +LG + EL T+ ++N + D +F+ V ++
Sbjct: 13 IFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFK---TVYRKPIK 69
Query: 61 DDDVLEKELKEAFRLYDKE 79
KE+ +AFR DKE
Sbjct: 70 TPTEQSKEMLDAFRALDKE 88
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFL 52
D GTI++ ++R +L LG + E+E ++ E++V I++E F+
Sbjct: 85 LDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFV 135
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 102 YDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 155
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 156 --IVLQRLTDIFRRYDTDQ 172
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
FD G I +++R + LG + EL+ +I E +V+ ++++EEF ++
Sbjct: 15 FDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ 70
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 101 YDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 154
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 155 --IVLQRLTDIFRRYDTDQ 171
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 80 YDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 133
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 134 --IVLQRLTDIFRRYDTDQ 150
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 83 YDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 136
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 137 --IVLQRLTDIFRRYDTDQ 153
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 79 YDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 132
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 133 --IVLQRLTDIFRRYDTDQ 149
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+E+L + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMARCMKDD 88
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 26/104 (25%)
Query: 2 FDSGKRGTIEKEKVRTI----LNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
D G+ GT+ +E + I +N LG + +I+ E D+++F F++ H
Sbjct: 38 LDKGENGTLSREDFQRIPELAINPLG--------DRIINAFFPEGEDQVNFRGFMRTLAH 89
Query: 58 FL------RDDDVLEKE--------LKEAFRLYDKEETHVSSRD 87
F + DV E L AFRLYD ++ SRD
Sbjct: 90 FRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDEKISRD 133
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD K G I + + T+G+ ++EL + +IN+ G + F++F+++
Sbjct: 19 FDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 71
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I E++ T++ +L + EL+ +I E++ + I F+EFL +
Sbjct: 18 LFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD+ GTI+ ++++ LG E++ I EI+ E K +F +FL V
Sbjct: 39 LFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTVXTQKXS 98
Query: 61 DDDVLEKELKEAFRLYDKEET-HVSSRDVIVVC----HFLRDDDVQE 102
+ D E+ LK AF+L+D +ET +S +++ V L D+++QE
Sbjct: 99 EKDTKEEILK-AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 144
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I + ++ + LG + D EL+ IDE + + ++S +EFL++
Sbjct: 112 LFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRI 165
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I + ++ + LG + D EL+ +IDE + + ++S +EFL++
Sbjct: 19 LFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 72
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
+D G I+K +++ L+ G+ + D + +I + + + +I+F++F+Q C
Sbjct: 83 YDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ-GC----- 136
Query: 62 DDVLEKELKEAFRLYDKEE 80
++ + L + FR YD ++
Sbjct: 137 --IVLQRLTDIFRRYDTDQ 153
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ ++ LG EL+ +IDE++ + + F+E+L + ++DD
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVMMVRCMKDD 88
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD + G I + ++ + LG + D EL+ +IDE + + ++S +EFL++
Sbjct: 29 LFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G ++ +++ + LG + E+ +IDE + E + +++F V +
Sbjct: 31 LFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKIL 90
Query: 61 DDDVLEKELKEAFRLYDKEET 81
D L+ E+K AF+L+D + T
Sbjct: 91 KRDPLD-EIKRAFQLFDDDHT 110
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVAC 56
+FD G I + +R + LG + D EL +I+E +++ +I+ EF+ +
Sbjct: 104 LFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I+ ++ +L LG +EL+ +I E++ SG+ S+ +FL++
Sbjct: 41 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 93
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 26/104 (25%)
Query: 2 FDSGKRGTIEKEKVRTI----LNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
D G+ GT+ +E + I +N LG + +I+ E D+++F F++ H
Sbjct: 38 LDKGENGTLSREDFQRIPELAINPLG--------DRIINAFFSEGEDQVNFRGFMRTLAH 89
Query: 58 FL------RDDDVLEKE--------LKEAFRLYDKEETHVSSRD 87
F + DV E L AFRLYD ++ SRD
Sbjct: 90 FRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRD 133
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
FDS + GT++ ++++ L T+G ++ + ++ + KI+F+++ +AC
Sbjct: 81 FDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSG--KITFDDY--IACC---- 132
Query: 62 DDVLEKELKEAFRLYDKEE 80
V + L ++FR D +
Sbjct: 133 --VKLRALTDSFRRRDSAQ 149
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
FD G I+ ++ +L LG +EL+ +I E++ SG+ S+ +FL++
Sbjct: 60 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 112
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 29.3 bits (64), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I+ ++ + ++LG DD EL ++ E+ ++F FL + L
Sbjct: 27 MIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS 82
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D+ +T
Sbjct: 83 GTDS-EETIRNAFGMFDELDTK 103
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I+ ++ + ++LG DD EL ++ E+ ++F FL + L
Sbjct: 31 MIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS 86
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D+ +T
Sbjct: 87 GTDS-EETIRNAFGMFDELDTK 107
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I+ ++ + ++LG DD EL ++ E+ ++F FL + L
Sbjct: 31 MIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS 86
Query: 61 DDDVLEKELKEAFRLYDKEETH 82
D E+ ++ AF ++D+ +T
Sbjct: 87 GTDS-EETIRNAFGMFDELDTK 107
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.3 bits (64), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
MFD G I +++ + + I ELE++I++++ ++ F EF+++ +F+R
Sbjct: 425 MFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVR 484
Query: 61 DD 62
++
Sbjct: 485 NE 486
>pdb|3H0G|D Chain D, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|P Chain P, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 135
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 2 FDSGKRGTI---EKEKVRTILNTLGHFIDDVELETVIDEINV 40
F+ + GT+ + E+ RT++ +L + IDD L+ ++DE++
Sbjct: 88 FERAQLGTLCCEDAEEARTLIPSLANKIDDQNLQGILDELST 129
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
FD+ + GT++ ++++ L T+G + + ++ + KI+F+++ +AC
Sbjct: 112 FDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNG--KITFDDY--IACC---- 163
Query: 62 DDVLEKELKEAFRLYDKEETHV 83
V + L ++FR D + V
Sbjct: 164 --VKLRALTDSFRRRDTAQQGV 183
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 2 FDSGKRGTIEKEKVRTILNTL-GHFIDDVELETVIDEINVESGDKISFEEFLQVAC 56
FD+ G I ++R + L GH + ++E +I ++++ ++ FEEF+++
Sbjct: 16 FDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 71
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVAC 56
+FD G I + +R + LG + D EL I+E +++ +I+ EF+ +
Sbjct: 104 LFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAICT 159
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+FD G ++ +++ LG + E+ +IDE + E +++F V +
Sbjct: 31 LFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXGEKIL 90
Query: 61 DDDVLEKELKEAFRLYDKEET 81
D L+ E+K AF+L+D + T
Sbjct: 91 KRDPLD-EIKRAFQLFDDDHT 110
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I+KE + +L ++G D LE ++ E+ I+F FL + L
Sbjct: 15 MIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPINFTMFLTMFGEKLN 70
Query: 61 DDDVLEKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELKEAFR 110
D E ++ AF +D+E + D + D ++E+ E +R
Sbjct: 71 GTDP-EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYR 119
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
FD G I ++ +R +L T+G D E++ + E ++ ++ EF ++ H
Sbjct: 85 FDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKH 140
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I+ ++ ++LG DD EL ++ E+ ++F FL + L
Sbjct: 10 MIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLS 65
Query: 61 DDDVLEKELKEAFRLYDKEET 81
D E+ ++ AF ++D++ T
Sbjct: 66 GTDS-EETIRNAFGMFDEDAT 85
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGD-KISFEEFLQVACHFLRDDDVLE 66
G ++ + I F D + T + + E+ D +I F EF+Q R L+
Sbjct: 41 GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRG--TLD 98
Query: 67 KELKEAFRLYDKEETHVSSRD 87
++L+ AF+LYD + +R+
Sbjct: 99 EKLRWAFKLYDLDNDGYITRN 119
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 2 FDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRD 61
FD+ G I ++ L TLG D E+ ++ EI+ + ISF+EF F R
Sbjct: 20 FDTNGDGKISSSELGDALKTLGSVTPD-EVRRMMAEIDTDGDGFISFDEF----TDFARA 74
Query: 62 DDVLEKELKEAF 73
+ L K++ + F
Sbjct: 75 NRGLVKDVSKIF 86
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
+ D K G I K +R ++LG + EL++++ E+ I+F FL + +
Sbjct: 65 LIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMV----AEAPGPINFTMFLTIFGDRIA 120
Query: 61 DDDVLEKELKEAFRLYD------KEET 81
D E + AF L+D KEET
Sbjct: 121 GTDE-EDVIVNAFNLFDEGDGKCKEET 146
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G + +R +L LG + D E++ ++ + V+S +I +++F++
Sbjct: 13 VFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 5 GKRGTIEKEKVRTILNTLGHFI--DDVELETVIDEINVESGDKISFEEFL 52
G I KE+++ ++ TLG + L+ +I+E++ ++SFEEFL
Sbjct: 19 GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
>pdb|2I6U|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase
Complexed With Carbamoyl Phosphate And L-Norvaline From
Mycobacterium Tuberculosis (Rv1656) At 2.2 A
pdb|2I6U|B Chain B, Crystal Structure Of Ornithine Carbamoyltransferase
Complexed With Carbamoyl Phosphate And L-Norvaline From
Mycobacterium Tuberculosis (Rv1656) At 2.2 A
pdb|2I6U|C Chain C, Crystal Structure Of Ornithine Carbamoyltransferase
Complexed With Carbamoyl Phosphate And L-Norvaline From
Mycobacterium Tuberculosis (Rv1656) At 2.2 A
pdb|2P2G|A Chain A, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
pdb|2P2G|B Chain B, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
pdb|2P2G|C Chain C, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
pdb|2P2G|D Chain D, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
pdb|2P2G|E Chain E, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
pdb|2P2G|F Chain F, Crystal Structure Of Ornithine Carbamoyltransferase From
Mycobacterium Tuberculosis (rv1656): Orthorhombic Form
Length = 307
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 90 VVCHFLRDDDVQEKELKEAFRLYD--KEEPMS 119
V+ HFLRDDD+ E E L K++P+S
Sbjct: 1 VIRHFLRDDDLSPAEQAEVLELAAELKKDPVS 32
>pdb|1VKI|A Chain A, Crystal Structure Of A Putative Oligo-Nucleotide Binding
Protein (Atu3699, Agr_l_2275) From Agrobacterium
Tumefaciens Str. C58 At 1.60 A Resolution
pdb|1VKI|B Chain B, Crystal Structure Of A Putative Oligo-Nucleotide Binding
Protein (Atu3699, Agr_l_2275) From Agrobacterium
Tumefaciens Str. C58 At 1.60 A Resolution
Length = 181
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 58 FLRDDDVLEKELKEAFRLYDKEETHVSSRDVI 89
F+ D D+LE EL L + + T ++S+D+I
Sbjct: 133 FVLDSDLLENELVNGHPLSNDQTTTIASKDLI 164
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G + +R +L LG + D E++ ++ + V+S +I +++F++
Sbjct: 91 VFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 143
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQ 53
+FD G + ++R +L TLG + + E+ETV+ + +S I++E FL+
Sbjct: 95 VFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLK 146
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLR 60
M D + G I E ++ + ++LG D EL ++ E + ++F FL + +
Sbjct: 24 MIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQ----LNFTAFLTLFGEKVS 79
Query: 61 DDDVLEKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELKEAFR 110
D E L+ AF ++D++ D + D+ ++E+K ++
Sbjct: 80 GTDP-EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACHFLRDD 62
G I +++ + LG EL+ IDE++ + + F+EFL +DD
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLVXXVRCXKDD 88
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/57 (22%), Positives = 30/57 (52%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQVACH 57
M D+ GTI ++++ L +G + + E++ ++D +++ I + EF+ H
Sbjct: 31 MIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH 87
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 46 ISFEEFLQVACHFLRDDDVLEKELKEAFRLYD-KEETHVSSRDVIVVCHFL--------- 95
I FEEF+ V R LE++L AF LYD + +++ +++ + +
Sbjct: 80 IHFEEFITVLSTTSRG--TLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVT 137
Query: 96 --RDDDVQEKELKEAFRLYDKEE 116
D+ E +K+ F+L DK E
Sbjct: 138 LNEDEATPEMRVKKIFKLMDKNE 160
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 26.2 bits (56), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD GTI + +R + LG + + EL+ +I E + ++I +EF+++
Sbjct: 17 LFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 70
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 30 ELETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKEET-HVSSRDV 88
E++ V+D ++ + I + EF+ VA R + + L+ AFR++D + + +SS ++
Sbjct: 383 EVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISSTEL 440
Query: 89 IVV 91
+
Sbjct: 441 ATI 443
>pdb|3QTA|A Chain A, Crystal Structure Of A Hypothetical Chec-Like Protein
(Rrnac0528) From Haloarcula Marismortui Atcc 43049 At
2.00 A Resolution
pdb|3QTA|B Chain B, Crystal Structure Of A Hypothetical Chec-Like Protein
(Rrnac0528) From Haloarcula Marismortui Atcc 43049 At
2.00 A Resolution
Length = 233
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 23/135 (17%)
Query: 8 GTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKIS------FEEFLQVACHFLRD 61
GTI +VR G F+ E ET + + +G + E LQ C+ L
Sbjct: 59 GTIYSARVRLTEPPYGVFLXTFETETAAEIAELXTGSSVEDGFTQLHESALQEXCNILTS 118
Query: 62 D--DVLEKELK-------------EAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEKELK 106
D + L +A + DK +HV + +V L D++E ++
Sbjct: 119 GFIDGIANTLNATINXGTPTVVQDDATEIADKALSHVRRDSLTIVLDSLV--DIKESDVA 176
Query: 107 EAFRLYDKEEPMSIV 121
+ R++ +P S V
Sbjct: 177 FSLRIFLIPDPGSFV 191
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 30 ELETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKEET-HVSSRDV 88
E++ V+D ++ + I + EF+ VA R + + L+ AFR++D + + +SS ++
Sbjct: 407 EVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISSTEL 464
Query: 89 IVV 91
+
Sbjct: 465 ATI 467
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 25.8 bits (55), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 30 ELETVIDEINVESGDKISFEEFLQVACHFLRDDDVLEKELKEAFRLYDKEET-HVSSRDV 88
E++ V+D ++ + I + EF+ VA R + + L+ AFR++D + + +SS ++
Sbjct: 406 EVDQVLDAVDFDKNGYIEYSEFVTVAMD--RKTLLSRERLERAFRMFDSDNSGKISSTEL 463
Query: 89 IVV 91
+
Sbjct: 464 ATI 466
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVELETVIDEINVESGDKISFEEFLQV 54
+FD G I ++R +L +LG + + E++ ++ + V+ G +++ +F+Q+
Sbjct: 84 VFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDG-MVNYHDFVQM 136
>pdb|3L0I|A Chain A, Complex Structure Of Sidm/drra With The Wild Type Rab1
pdb|3L0I|C Chain C, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 363
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 50 EFLQVACHFLRDDDVLEKELKEAFRLYDKEETHVSSRDVI 89
E + V H R D L+E F LY ++ H+S+ I
Sbjct: 49 EVVSVKTHIXRPIDFXLXGLREEFNLYSEDGAHLSAPGTI 88
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 15/129 (11%)
Query: 1 MFDSGKRGTIEKEKVRTILNTLGHFIDDVEL-ETVIDEINVESGDKISFEEFLQVACHFL 59
F G + K + + I F D E V + + + I F+EF+
Sbjct: 34 FFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTS 93
Query: 60 RDDDVLEKELKEAFRLYDKEETHVSSRD------------VIVVCHFLRDDDVQEKELKE 107
R + L +L AF+LYD + + S D V + D+D EK + +
Sbjct: 94 RGE--LNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNK 151
Query: 108 AFRLYDKEE 116
F + DK +
Sbjct: 152 IFNMMDKNK 160
>pdb|3FN2|A Chain A, Crystal Structure Of A Putative Sensor Histidine Kinase
Domain From Clostridium Symbiosum Atcc 14940
pdb|3FN2|B Chain B, Crystal Structure Of A Putative Sensor Histidine Kinase
Domain From Clostridium Symbiosum Atcc 14940
Length = 106
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 66 EKELKEAFRLYDKEETHVSSRDVIVVCHFLRDDDVQEK 103
EKELK+ +R Y + ++ +D V+ + D VQ+K
Sbjct: 37 EKELKDKYRYYGRGYVRITDKDGQVITY--EDGSVQDK 72
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 14/68 (20%)
Query: 4 SGKRG---TIEKEKVRTILNT-LGHFIDDVELETVIDEINV---ESGD-KISFEEFLQ-- 53
SG+ G ++K +++ ++N L HF+++++ + V+D++ E GD + F+EF+
Sbjct: 18 SGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFV 77
Query: 54 ----VACH 57
ACH
Sbjct: 78 SMVTTACH 85
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 14/68 (20%)
Query: 4 SGKRG---TIEKEKVRTILNT-LGHFIDDVELETVIDEINV---ESGD-KISFEEFLQ-- 53
SG+ G ++K +++ ++N L HF+++++ + V+D++ E GD + F+EF+
Sbjct: 19 SGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFV 78
Query: 54 ----VACH 57
ACH
Sbjct: 79 SMVTTACH 86
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 25.0 bits (53), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 15/16 (93%)
Query: 66 EKELKEAFRLYDKEET 81
E+ELKEAFR++DK++
Sbjct: 3 EEELKEAFRVFDKDQN 18
>pdb|3CER|A Chain A, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|B Chain B, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|C Chain C, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|D Chain D, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|E Chain E, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
Length = 343
Score = 25.0 bits (53), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 9 TIEKEKVRTILNTLGHFIDDVELETVIDEIN--VESGDKISFEEFLQVACHFLRDDDVLE 66
T++ K RTI+ G L + E + V G ++SFE+ V FLR
Sbjct: 219 TVDAGKARTIIGVSGTVTTXTALAXGLKEYDHTVVDGHRLSFEDAYAVDDKFLRXTRAER 278
Query: 67 KELK 70
+E K
Sbjct: 279 REYK 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.139 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,549,867
Number of Sequences: 62578
Number of extensions: 139344
Number of successful extensions: 1126
Number of sequences better than 100.0: 231
Number of HSP's better than 100.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 527
Number of HSP's gapped (non-prelim): 520
length of query: 121
length of database: 14,973,337
effective HSP length: 83
effective length of query: 38
effective length of database: 9,779,363
effective search space: 371615794
effective search space used: 371615794
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)