Query psy1571
Match_columns 164
No_of_seqs 109 out of 194
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 19:29:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1571.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/1571hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ghfa1 g.37.1.1 (A:45-102) Zi 14.4 20 0.0015 20.9 0.4 10 152-161 24-33 (58)
2 d1c25a_ c.46.1.1 (A:) CDC25a { 11.1 41 0.003 22.6 1.3 17 146-162 135-151 (161)
3 d1v54l_ f.23.6.1 (L:) Mitochon 10.6 1.4E+02 0.01 16.2 3.9 28 129-156 16-44 (46)
4 d1h4ra2 b.55.1.5 (A:215-313) M 10.5 85 0.0062 19.1 2.6 18 22-39 77-94 (99)
5 d1ef1a2 b.55.1.5 (A:199-297) M 9.1 95 0.0069 18.9 2.4 17 22-38 77-93 (99)
6 d1gg3a2 b.55.1.5 (A:188-279) E 8.9 50 0.0036 20.0 0.9 16 24-39 77-92 (92)
7 d2oq0a1 b.40.16.1 (A:115-202) 7.8 49 0.0035 20.8 0.5 9 152-160 50-58 (88)
8 d2pbka1 b.57.1.1 (A:3-230) KSH 7.8 32 0.0023 25.4 -0.5 10 8-17 105-114 (228)
9 d2h8aa1 f.56.1.1 (A:9-147) Mic 7.2 2.1E+02 0.016 18.3 3.8 66 68-147 68-136 (139)
10 d1o6ea_ b.57.1.1 (A:) Epstein- 6.6 40 0.0029 24.9 -0.5 9 8-16 106-114 (232)
No 1
>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.37 E-value=20 Score=20.93 Aligned_cols=10 Identities=40% Similarity=0.790 Sum_probs=8.3
Q ss_pred hhhhcccCCc
Q psy1571 152 RHNAYCEPGD 161 (164)
Q Consensus 152 ~H~~~C~pga 161 (164)
.||..|+||-
T Consensus 24 ~HNak~Hpge 33 (58)
T d2ghfa1 24 EHNLKYHPGE 33 (58)
T ss_dssp THHHHTSTTC
T ss_pred hhhcccCCCc
Confidence 5999999973
No 2
>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.14 E-value=41 Score=22.55 Aligned_cols=17 Identities=29% Similarity=0.684 Sum_probs=13.7
Q ss_pred HHHHHHhhhhcccCCcc
Q psy1571 146 AGYCFLRHNAYCEPGDI 162 (164)
Q Consensus 146 ~~y~f~~H~~~C~pgaY 162 (164)
.--|+-.|...|+|+.|
T Consensus 135 ~~~w~~~~p~lc~p~~y 151 (161)
T d1c25a_ 135 YKEFFMKCQSYCEPPSY 151 (161)
T ss_dssp HHHHHHHHGGGEESSCC
T ss_pred HHHHHHHCcCccCCCCc
Confidence 33567789999999988
No 3
>d1v54l_ f.23.6.1 (L:) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) {Cow (Bos taurus) [TaxId: 9913]}
Probab=10.60 E-value=1.4e+02 Score=16.25 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=19.1
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHhhhhc
Q psy1571 129 FNLKLK-CFVLNIFCFSIAGYCFLRHNAY 156 (164)
Q Consensus 129 ~~~K~~-l~~~~~~~~~~~~y~f~~H~~~ 156 (164)
.|||.. .+.+++++-+.+-.+=+||+..
T Consensus 16 Nk~rLla~m~~~fGsgfa~PF~ivRhqLl 44 (46)
T d1v54l_ 16 NKWRLLAMMTLFFGSGFAAPFFIVRHQLL 44 (46)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhccccchHHHHHHHHh
Confidence 345554 5666788877777777888753
No 4
>d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.47 E-value=85 Score=19.07 Aligned_cols=18 Identities=11% Similarity=0.097 Sum_probs=14.4
Q ss_pred chhHHHHHHHHHHhhHHH
Q psy1571 22 TLQRIVFTSAIVLHTGPR 39 (164)
Q Consensus 22 ~Pqr~iW~~~Ialh~~pR 39 (164)
.--+++|+.++.-|.-.|
T Consensus 77 ~~aK~lw~~c~e~H~Fy~ 94 (99)
T d1h4ra2 77 RVNKLILQLCIGNHDLFM 94 (99)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345899999999987655
No 5
>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.09 E-value=95 Score=18.88 Aligned_cols=17 Identities=6% Similarity=0.047 Sum_probs=13.4
Q ss_pred chhHHHHHHHHHHhhHH
Q psy1571 22 TLQRIVFTSAIVLHTGP 38 (164)
Q Consensus 22 ~Pqr~iW~~~Ialh~~p 38 (164)
.--+++|+.++.-|.-.
T Consensus 77 ~~~k~lw~~c~e~H~Ff 93 (99)
T d1ef1a2 77 RINKRILALCMGNHELY 93 (99)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34589999999999654
No 6
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.87 E-value=50 Score=19.97 Aligned_cols=16 Identities=19% Similarity=0.187 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHhhHHH
Q psy1571 24 QRIVFTSAIVLHTGPR 39 (164)
Q Consensus 24 qr~iW~~~Ialh~~pR 39 (164)
-+++|+.++.=|+-.|
T Consensus 77 aK~lwk~cve~H~FfR 92 (92)
T d1gg3a2 77 AKKLWKVCVEHHTFFR 92 (92)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhhcC
Confidence 4899999998886543
No 7
>d2oq0a1 b.40.16.1 (A:115-202) Gamma-interferon-inducible protein Ifi-16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.84 E-value=49 Score=20.79 Aligned_cols=9 Identities=56% Similarity=0.921 Sum_probs=6.8
Q ss_pred hhhhcccCC
Q psy1571 152 RHNAYCEPG 160 (164)
Q Consensus 152 ~H~~~C~pg 160 (164)
.||..||+|
T Consensus 50 ~~ni~CeeG 58 (88)
T d2oq0a1 50 CHNIPCEEG 58 (88)
T ss_dssp GSSCCCCTT
T ss_pred EeecccCCC
Confidence 477888877
No 8
>d2pbka1 b.57.1.1 (A:3-230) KSHV protease {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=7.80 E-value=32 Score=25.40 Aligned_cols=10 Identities=30% Similarity=0.647 Sum_probs=5.9
Q ss_pred Ccccchhhhh
Q psy1571 8 PNYLPSVSAA 17 (164)
Q Consensus 8 ~N~lPSiSAa 17 (164)
-|||||+|=.
T Consensus 105 s~~lPslSLS 114 (228)
T d2pbka1 105 HTWLPGLSLS 114 (228)
T ss_dssp HHHCCEEEEE
T ss_pred ecccccceec
Confidence 3677766643
No 9
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=7.22 E-value=2.1e+02 Score=18.30 Aligned_cols=66 Identities=14% Similarity=-0.056 Sum_probs=39.8
Q ss_pred HHHHHHHh---hheeEeeecCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcchhhhHHHHHHHHHHHHHHHH
Q psy1571 68 LNIIEIVS---LLALTLVPSAVNYPIHEKCFITFILTSEVYMIVTCWIYKKERQLPFNNLESRSFNLKLKCFVLNIFCFS 144 (164)
Q Consensus 68 ~~~~e~~s---l~gltyvsS~e~~~~H~~~fi~f~~~s~~~M~~~~~l~~~~~~~~~~~~~~~S~~~K~~l~~~~~~~~~ 144 (164)
.|..|++. .+++.++-...+.+.....+.+|.++=+.|.++-+. + . ...+|...+...+++.+
T Consensus 68 ~N~~E~~~~F~~~~l~~~~~~~~~~~~~~l~~~f~~~Ri~h~~~y~~-----~----~-----~~p~R~~~~~~g~~~~~ 133 (139)
T d2h8aa1 68 LNDLENIVPFLGIGLLYSLSGPDLSTALIHFRIFVGARIYHTIAYLT-----P----L-----PQPNRGLAFFVGYGVTL 133 (139)
T ss_dssp HHHHHTTHHHHHHHHHTTTSCCCSTTHHHHHHHHHHHHHHHHHHHHS-----S----C-----SHHHHHHHHHHHTHHHH
T ss_pred HcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHh-----c----C-----CccHHHHHHHHHHHHHH
Confidence 34455532 333444445556678888889999999999875421 0 1 12356666666666666
Q ss_pred HHH
Q psy1571 145 IAG 147 (164)
Q Consensus 145 ~~~ 147 (164)
.++
T Consensus 134 ~m~ 136 (139)
T d2h8aa1 134 SMA 136 (139)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 10
>d1o6ea_ b.57.1.1 (A:) Epstein-Barr virus protease {Human herpesvirus 4 [TaxId: 10376]}
Probab=6.63 E-value=40 Score=24.91 Aligned_cols=9 Identities=44% Similarity=0.715 Sum_probs=4.9
Q ss_pred Ccccchhhh
Q psy1571 8 PNYLPSVSA 16 (164)
Q Consensus 8 ~N~lPSiSA 16 (164)
-|||||+|=
T Consensus 106 s~~lPslSL 114 (232)
T d1o6ea_ 106 HAWLPSLSL 114 (232)
T ss_dssp HHHSCEEEE
T ss_pred eccCcccee
Confidence 356666553
Done!