Query psy15713
Match_columns 426
No_of_seqs 475 out of 4112
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 19:34:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 4.6E-39 1.6E-43 314.7 19.6 336 48-426 25-375 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 8.4E-39 2.9E-43 312.8 15.0 319 67-426 9-342 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 7.5E-39 2.6E-43 294.2 11.1 226 173-426 36-284 (285)
4 4gpm_A Engineered protein OR26 100.0 1.5E-37 5.2E-42 262.6 16.0 158 178-423 6-164 (169)
5 1oy3_D Transcription factor in 100.0 1.8E-37 6.2E-42 285.0 15.8 198 173-426 6-256 (282)
6 4b93_B Ankyrin repeat domain-c 100.0 3E-38 1E-42 288.0 9.8 219 176-422 11-246 (269)
7 4g8k_A 2-5A-dependent ribonucl 100.0 4.2E-37 1.5E-41 290.3 15.9 243 148-424 36-330 (337)
8 3utm_A Tankyrase-1; tankyrase, 100.0 1E-36 3.4E-41 288.8 17.8 231 170-426 18-311 (351)
9 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-36 4.8E-41 276.2 16.2 214 176-420 3-222 (261)
10 1yyh_A HN1;, notch 1, ankyrin 100.0 7.2E-37 2.5E-41 276.8 12.1 220 172-419 6-247 (253)
11 1k1a_A B-cell lymphoma 3-encod 100.0 7.1E-36 2.4E-40 267.9 17.6 203 172-426 5-214 (241)
12 1wdy_A 2-5A-dependent ribonucl 100.0 6.7E-36 2.3E-40 274.6 17.8 224 175-426 4-251 (285)
13 3aji_A 26S proteasome non-ATPa 100.0 4.3E-37 1.5E-41 274.2 9.3 216 178-421 8-231 (231)
14 2f8y_A Notch homolog 1, transl 100.0 3E-36 1E-40 267.2 14.4 215 148-423 2-219 (223)
15 3b7b_A Euchromatic histone-lys 100.0 7.7E-36 2.6E-40 267.1 17.0 198 173-426 8-208 (237)
16 3kea_A K1L; tropism, ANK repea 100.0 6.7E-37 2.3E-41 281.9 9.7 196 172-425 27-225 (285)
17 2fo1_E LIN-12 protein; beta-ba 100.0 6.6E-37 2.3E-41 292.9 9.5 231 173-426 91-344 (373)
18 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-35 3.9E-40 273.7 15.9 221 172-423 55-282 (285)
19 3ljn_A Hypothetical protein; a 100.0 2.1E-36 7E-41 288.7 9.7 220 173-422 17-271 (364)
20 1s70_B 130 kDa myosin-binding 100.0 3.2E-35 1.1E-39 272.5 17.4 196 175-426 39-263 (299)
21 4g8k_A 2-5A-dependent ribonucl 100.0 4.2E-35 1.4E-39 276.6 16.7 229 175-425 24-303 (337)
22 2dzn_A Probable 26S proteasome 100.0 8.4E-35 2.9E-39 258.7 16.0 195 176-426 2-206 (228)
23 3d9h_A CDNA FLJ77766, highly s 100.0 2E-35 6.8E-40 272.1 10.2 205 148-390 70-282 (285)
24 2fo1_E LIN-12 protein; beta-ba 100.0 2.9E-36 9.9E-41 288.5 3.2 222 174-421 123-372 (373)
25 2rfa_A Transient receptor pote 100.0 1E-34 3.5E-39 259.0 13.0 193 176-423 3-225 (232)
26 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-34 3.9E-39 263.6 11.9 201 174-406 34-249 (261)
27 3hra_A Ankyrin repeat family p 100.0 6.9E-34 2.3E-38 247.8 15.6 189 175-418 4-201 (201)
28 1yyh_A HN1;, notch 1, ankyrin 100.0 3.7E-34 1.3E-38 259.0 14.0 205 200-426 6-221 (253)
29 1ikn_D Protein (I-kappa-B-alph 100.0 1.9E-35 6.6E-40 264.5 5.5 200 173-422 5-211 (236)
30 3eu9_A Huntingtin-interacting 100.0 4.1E-34 1.4E-38 255.9 13.1 223 175-425 8-240 (240)
31 1k1a_A B-cell lymphoma 3-encod 100.0 3E-35 1E-39 263.8 5.3 192 173-420 43-241 (241)
32 2etb_A Transient receptor pote 100.0 2.5E-34 8.6E-39 260.5 6.6 191 175-421 1-247 (256)
33 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.2E-33 1.5E-37 234.2 13.3 156 176-420 5-162 (162)
34 3utm_A Tankyrase-1; tankyrase, 100.0 3.7E-33 1.3E-37 264.2 13.4 225 173-420 55-334 (351)
35 3b7b_A Euchromatic histone-lys 100.0 5.8E-33 2E-37 248.4 13.1 187 174-416 42-231 (237)
36 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.3E-32 7.8E-37 231.5 16.0 157 174-418 12-169 (169)
37 3kea_A K1L; tropism, ANK repea 100.0 2.4E-33 8.3E-38 258.1 10.6 205 148-424 42-250 (285)
38 2pnn_A Transient receptor pote 100.0 8.5E-34 2.9E-38 259.6 6.1 201 172-424 9-263 (273)
39 2dzn_A Probable 26S proteasome 100.0 2.6E-33 9E-38 249.0 8.5 187 172-417 32-227 (228)
40 3v31_A Ankyrin repeat family A 100.0 1.3E-32 4.5E-37 232.5 12.1 160 176-423 3-163 (167)
41 2f8y_A Notch homolog 1, transl 100.0 1.2E-32 4.1E-37 243.9 12.4 172 233-426 14-189 (223)
42 3v30_A DNA-binding protein rfx 100.0 1.2E-32 4.3E-37 233.8 11.2 161 177-425 3-165 (172)
43 3aji_A 26S proteasome non-ATPa 100.0 1.4E-32 4.7E-37 245.0 11.9 199 201-426 3-203 (231)
44 2rfm_A Putative ankyrin repeat 100.0 1.5E-32 5.3E-37 237.6 11.2 159 172-418 31-190 (192)
45 1oy3_D Transcription factor in 100.0 9.1E-33 3.1E-37 253.5 10.1 201 148-407 20-270 (282)
46 4b93_B Ankyrin repeat domain-c 100.0 7.5E-33 2.6E-37 252.3 7.8 205 200-426 7-216 (269)
47 3ljn_A Hypothetical protein; a 100.0 4.2E-34 1.4E-38 272.7 -1.5 225 173-421 50-315 (364)
48 3f6q_A Integrin-linked protein 100.0 6.2E-32 2.1E-36 231.1 12.1 163 176-425 5-168 (179)
49 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-31 4.3E-36 225.9 12.5 160 172-419 4-164 (165)
50 3jxi_A Vanilloid receptor-rela 100.0 9.3E-33 3.2E-37 250.7 5.4 192 175-422 4-252 (260)
51 1awc_B Protein (GA binding pro 100.0 6E-31 2.1E-35 218.9 15.2 149 177-414 3-152 (153)
52 1sw6_A Regulatory protein SWI6 100.0 1.2E-31 4.2E-36 251.6 11.3 188 178-426 99-314 (327)
53 4hbd_A KN motif and ankyrin re 100.0 2.3E-31 7.8E-36 243.7 10.7 189 174-418 74-273 (276)
54 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2E-30 6.8E-35 216.4 15.1 153 176-417 2-155 (156)
55 2vge_A RELA-associated inhibit 100.0 8.1E-33 2.8E-37 246.0 -2.2 183 173-414 18-207 (229)
56 1s70_B 130 kDa myosin-binding 100.0 1.1E-30 3.8E-35 241.9 10.2 208 148-416 51-285 (299)
57 3eu9_A Huntingtin-interacting 100.0 4.6E-30 1.6E-34 229.5 11.8 199 200-426 5-208 (240)
58 1d9s_A Cyclin-dependent kinase 100.0 1E-29 3.5E-34 207.0 12.8 133 233-420 2-136 (136)
59 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.4E-31 2.9E-35 234.8 4.0 162 175-425 4-169 (239)
60 4gpm_A Engineered protein OR26 100.0 1.5E-29 5.2E-34 213.5 11.2 140 148-342 15-155 (169)
61 3t8k_A Uncharacterized protein 100.0 4.1E-30 1.4E-34 220.6 6.9 164 177-426 7-185 (186)
62 2rfa_A Transient receptor pote 100.0 8.4E-29 2.9E-33 220.6 14.0 161 242-422 2-185 (232)
63 1sw6_A Regulatory protein SWI6 100.0 7.7E-30 2.6E-34 239.4 5.4 178 166-406 121-327 (327)
64 1bi7_B P16INK4A, MTS1, multipl 100.0 7.2E-29 2.5E-33 207.0 10.7 137 236-426 5-142 (156)
65 1ikn_D Protein (I-kappa-B-alph 100.0 5.8E-30 2E-34 228.8 3.9 201 148-406 19-230 (236)
66 2pnn_A Transient receptor pote 99.9 7.7E-29 2.6E-33 226.6 6.0 208 148-400 24-272 (273)
67 3hra_A Ankyrin repeat family p 99.9 2.5E-27 8.7E-32 206.1 14.0 164 241-426 3-176 (201)
68 2rfm_A Putative ankyrin repeat 99.9 8.2E-28 2.8E-32 207.8 10.5 138 235-426 27-165 (192)
69 2etb_A Transient receptor pote 99.9 2.8E-28 9.7E-33 220.6 7.4 165 242-426 1-219 (256)
70 1bi7_B P16INK4A, MTS1, multipl 99.9 7.7E-28 2.6E-32 200.8 7.3 141 173-402 9-151 (156)
71 3v30_A DNA-binding protein rfx 99.9 1.1E-27 3.9E-32 203.1 6.7 126 173-347 33-159 (172)
72 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-26 4.1E-31 185.8 11.0 125 242-420 1-126 (126)
73 3v31_A Ankyrin repeat family A 99.9 1.2E-26 4E-31 195.8 11.5 131 242-426 2-133 (167)
74 2aja_A Ankyrin repeat family p 99.9 3.9E-28 1.3E-32 230.4 2.5 207 177-419 93-343 (376)
75 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.6E-26 8.7E-31 194.2 11.4 133 240-426 11-144 (169)
76 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-26 5E-31 188.3 9.3 126 239-418 10-136 (136)
77 2vge_A RELA-associated inhibit 99.9 6.9E-27 2.4E-31 207.7 6.4 139 233-425 8-153 (229)
78 1awc_B Protein (GA binding pro 99.9 5E-26 1.7E-30 189.1 10.8 129 243-426 2-131 (153)
79 3c5r_A BARD-1, BRCA1-associate 99.9 7.1E-27 2.4E-31 190.4 5.4 134 233-421 1-135 (137)
80 3jxi_A Vanilloid receptor-rela 99.9 7.1E-27 2.4E-31 211.9 5.7 197 148-389 16-252 (260)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 182.8 11.8 124 174-346 12-136 (136)
82 1d9s_A Cyclin-dependent kinase 99.9 2.5E-26 8.5E-31 186.9 6.3 125 173-347 9-135 (136)
83 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.5E-25 5.2E-30 187.9 11.1 130 242-426 4-135 (162)
84 3twr_A Tankyrase-2; ankyrin re 99.9 1E-25 3.5E-30 189.6 9.9 134 239-426 4-139 (165)
85 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-26 4.1E-31 207.7 4.3 147 148-350 16-166 (239)
86 3f6q_A Integrin-linked protein 99.9 2.4E-25 8.2E-30 190.0 11.7 132 241-426 3-136 (179)
87 2aja_A Ankyrin repeat family p 99.9 5E-27 1.7E-31 222.9 -1.4 178 177-423 66-253 (376)
88 3t8k_A Uncharacterized protein 99.9 4.5E-25 1.5E-29 189.2 10.5 132 173-348 35-179 (186)
89 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.9E-25 2.7E-29 182.3 10.9 129 243-426 2-131 (156)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-24 3.8E-29 174.2 10.6 123 176-347 2-125 (126)
91 4hbd_A KN motif and ankyrin re 99.9 3E-25 1E-29 203.0 7.9 153 171-344 106-271 (276)
92 3ui2_A Signal recognition part 99.9 1E-24 3.5E-29 195.7 10.4 141 174-420 43-185 (244)
93 3deo_A Signal recognition part 99.9 3.4E-24 1.1E-28 183.6 11.8 139 173-417 41-181 (183)
94 3ehr_A Osteoclast-stimulating 99.9 3.8E-25 1.3E-29 195.6 4.4 134 238-425 68-203 (222)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-24 3.8E-29 201.3 7.1 138 177-408 152-299 (301)
96 3aaa_C Myotrophin, protein V-1 99.9 3.5E-24 1.2E-28 170.9 8.2 117 174-339 5-122 (123)
97 3c5r_A BARD-1, BRCA1-associate 99.9 9E-25 3.1E-29 177.9 4.6 125 172-345 6-131 (137)
98 3aaa_C Myotrophin, protein V-1 99.9 3E-24 1E-28 171.4 5.7 116 240-409 4-120 (123)
99 3ehr_A Osteoclast-stimulating 99.9 4.8E-24 1.6E-28 188.5 7.1 125 172-345 69-195 (222)
100 3deo_A Signal recognition part 99.9 7E-26 2.4E-30 194.1 -7.1 125 240-419 41-167 (183)
101 3jue_A Arfgap with coiled-coil 99.9 7.1E-23 2.4E-27 193.6 10.9 165 174-423 197-367 (368)
102 1dcq_A PYK2-associated protein 99.9 5.6E-23 1.9E-27 187.8 9.6 192 173-423 63-266 (278)
103 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-22 6.6E-27 199.6 11.0 127 244-424 133-269 (497)
104 3lvq_E ARF-GAP with SH3 domain 99.9 2.3E-22 7.8E-27 199.1 11.4 117 178-343 134-260 (497)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.3E-22 1.8E-26 149.9 10.4 93 242-420 1-93 (93)
106 2b0o_E UPLC1; arfgap, structur 99.9 3.2E-22 1.1E-26 184.9 10.0 127 242-422 150-286 (301)
107 3ui2_A Signal recognition part 99.9 7.3E-23 2.5E-27 183.6 3.3 142 202-407 13-156 (244)
108 3jue_A Arfgap with coiled-coil 99.9 6.5E-22 2.2E-26 187.0 8.6 128 239-420 195-326 (368)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.6E-21 5.3E-26 147.3 9.1 91 176-313 2-93 (93)
110 1dcq_A PYK2-associated protein 99.8 4.1E-21 1.4E-25 175.4 11.3 122 177-347 131-262 (278)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.4E-21 8.3E-26 152.4 6.2 108 238-399 4-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 4.6E-21 1.6E-25 150.8 5.7 106 172-326 5-111 (115)
113 2him_A L-asparaginase 1; hydro 99.7 3.8E-18 1.3E-22 158.1 10.9 102 1-142 254-356 (358)
114 2zgd_A 3 repeat synthetic anky 99.7 6E-18 2E-22 131.7 9.5 89 172-307 20-109 (110)
115 1wls_A L-asparaginase; structu 99.7 9.4E-18 3.2E-22 154.0 10.8 102 1-142 224-326 (328)
116 1zq1_A Glutamyl-tRNA(Gln) amid 99.7 1.7E-17 5.7E-22 156.7 11.0 101 1-143 329-430 (438)
117 2d6f_A Glutamyl-tRNA(Gln) amid 99.7 1.8E-17 6.3E-22 156.2 10.7 101 1-143 326-427 (435)
118 2zgd_A 3 repeat synthetic anky 99.7 6.2E-18 2.1E-22 131.6 6.0 93 235-342 16-109 (110)
119 4pga_A Glutaminase-asparaginas 99.6 1.9E-15 6.6E-20 138.7 9.0 90 1-134 246-336 (337)
120 1nns_A L-asparaginase II; amid 99.6 2.9E-15 9.8E-20 137.6 9.2 90 1-134 236-325 (326)
121 1wsa_A Asparaginase, asparagin 99.6 3.2E-15 1.1E-19 137.5 9.1 90 1-134 240-329 (330)
122 1agx_A Glutaminase-asparaginas 99.6 5.7E-15 2E-19 135.9 9.7 90 1-134 240-330 (331)
123 3nxk_A Cytoplasmic L-asparagin 99.6 6.6E-15 2.3E-19 134.8 9.3 88 1-134 246-333 (334)
124 2wlt_A L-asparaginase; hydrola 99.5 7.1E-15 2.4E-19 135.3 8.4 89 1-134 243-331 (332)
125 1o7j_A L-asparaginase; atomic 99.4 2.3E-13 7.8E-18 125.0 7.9 85 1-134 242-326 (327)
126 2him_A L-asparaginase 1; hydro 96.7 0.00033 1.1E-08 64.9 1.0 86 14-108 238-323 (358)
127 2d6f_A Glutamyl-tRNA(Gln) amid 96.7 0.00065 2.2E-08 64.2 2.4 84 14-108 310-393 (435)
128 1zq1_A Glutamyl-tRNA(Gln) amid 96.7 0.0006 2E-08 64.5 2.1 84 14-108 313-396 (438)
129 1wls_A L-asparaginase; structu 96.3 0.00098 3.3E-08 61.0 1.4 85 14-108 208-293 (328)
130 1nns_A L-asparaginase II; amid 95.1 0.0062 2.1E-07 55.7 1.5 81 14-108 220-300 (326)
131 1wsa_A Asparaginase, asparagin 95.0 0.0067 2.3E-07 55.5 1.4 81 14-108 224-304 (330)
132 4pga_A Glutaminase-asparaginas 94.8 0.0079 2.7E-07 55.1 1.3 82 14-108 230-311 (337)
133 1agx_A Glutaminase-asparaginas 94.5 0.0088 3E-07 54.8 0.8 81 14-108 224-305 (331)
134 2wlt_A L-asparaginase; hydrola 93.7 0.023 7.8E-07 52.1 2.0 80 14-108 227-306 (332)
135 3nxk_A Cytoplasmic L-asparagin 92.6 0.028 9.5E-07 51.3 0.7 79 14-108 229-308 (334)
136 1o7j_A L-asparaginase; atomic 91.1 0.075 2.6E-06 48.5 1.8 47 14-62 226-272 (327)
137 1byr_A Protein (endonuclease); 37.6 92 0.0031 23.8 6.8 53 4-61 30-82 (155)
138 1gp8_A Protein (scaffolding pr 31.5 36 0.0012 19.5 2.3 21 178-198 15-35 (40)
139 3zrh_A Ubiquitin thioesterase 28.5 1.5E+02 0.005 27.5 7.0 64 181-265 27-91 (454)
140 4g26_A Pentatricopeptide repea 27.3 4.1E+02 0.014 25.2 10.9 94 233-344 100-199 (501)
141 4g26_A Pentatricopeptide repea 25.6 97 0.0033 29.7 5.9 70 257-342 91-162 (501)
142 2e2z_A TIM15; protein import, 24.7 37 0.0013 24.4 2.0 19 26-44 29-47 (100)
143 2fcj_A Small toprim domain pro 20.6 79 0.0027 23.6 3.2 30 2-36 26-56 (119)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.6e-39 Score=314.66 Aligned_cols=336 Identities=18% Similarity=0.098 Sum_probs=264.1
Q ss_pred hHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHH
Q psy15713 48 NIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEK 127 (426)
Q Consensus 48 ~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~ 127 (426)
+..+.++.|++.|.-+ +.......++|+++...+++.+.+.-... +. ..+.......++|+++...+ ..+.
T Consensus 25 g~~~~v~~Ll~~g~~~--~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~---g~--~~~~~~~~g~t~L~~A~~~g--~~~~ 95 (437)
T 1n11_A 25 GHLPIVKNLLQRGASP--NVSNVKVETPLHMAARAGHTEVAKYLLQN---KA--KVNAKAKDDQTPLHCAARIG--HTNM 95 (437)
T ss_dssp TCHHHHHHHHHTTCCS--CCSSSCCCCHHHHHHHHTCHHHHHHHHHH---TC--CSSCCCTTSCCHHHHHHHHT--CHHH
T ss_pred CCHHHHHHHHHcCCCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHhC---CC--CCCCCCCCCCCHHHHHHHCC--CHHH
Confidence 4456788888888532 22222345678888888877765532221 00 01112233445888888764 5777
Q ss_pred HHHHhccccc-------ccccccccCC-CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhh
Q psy15713 128 KKTIMLTNIR-------GELTSEKSTE-GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYV 199 (426)
Q Consensus 128 v~~~~~~~~~-------~~~~~~~~~~-g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~ 199 (426)
++.+++.... +......++. |+.++++.+++...... ..+..+.||||+|+..|+.+++++|+++.
T Consensus 96 v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 169 (437)
T 1n11_A 96 VKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA------CMTKKGFTPLHVAAKYGKVRVAELLLERD 169 (437)
T ss_dssp HHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc------CCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 7777765332 2222333333 88888888877642211 12345669999999999999999999983
Q ss_pred -----cCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccc
Q psy15713 200 -----KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 274 (426)
Q Consensus 200 -----~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~ 274 (426)
.+..|.||+++|+..++..+.+.++ ..|++++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 170 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 243 (437)
T 1n11_A 170 AHPNAAGKNGLTPLHVAVHHNNLDIVKLLL------PRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 243 (437)
T ss_dssp CCTTCCCSSCCCHHHHHHHTTCHHHHHHHG------GGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHH------hCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 3457899999999999865555543 34899999999999999999999999999999999999999999
Q ss_pred cCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hh
Q psy15713 275 VQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YE 352 (426)
Q Consensus 275 ~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~ 352 (426)
.|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|+..|+.+++++|++++.+++ .+
T Consensus 244 ~g~t~L~~A~~~g~---------~~----~v~~Ll~~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 308 (437)
T 1n11_A 244 QGVTPLHLAAQEGH---------AE----MVALLLSKQANGNL--GNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 308 (437)
T ss_dssp TCCCHHHHHHHTTC---------HH----HHHHHHTTTCCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred CCCCHHHHHHHCCC---------HH----HHHHHHhcCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCC
Confidence 99999999 88888 89 99999999999988 89999999999999999999999999988877 44
Q ss_pred hccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 353 FSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 353 ~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
..+.++++.|+..++.+++++| +++|+++|.+|..|+||||+|+.+|+.++|++|+++|||++.+|+
T Consensus 309 ~~g~t~L~~A~~~g~~~~v~~L-------l~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 309 RMGYTPLHVASHYGNIKLVKFL-------LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 375 (437)
T ss_dssp SSCCCHHHHHHHSSCSHHHHHH-------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCS
T ss_pred CCCCCHHHHHHHcCcHHHHHHH-------HhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCC
Confidence 5677899999999999999999 999999999999999999999999999999999999999998874
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.4e-39 Score=312.77 Aligned_cols=319 Identities=18% Similarity=0.139 Sum_probs=259.2
Q ss_pred CCHHHHHHHHHHHhcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcccc-------ccc
Q psy15713 67 MTPESALTKLSYVLSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLTNI-------RGE 139 (426)
Q Consensus 67 ~t~e~~~~~l~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~-------~~~ 139 (426)
...+.+.++|+++...+++++.+.--.. +. ..+.......++|+++...+ ..+.++.+++... .+.
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~---g~--~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR---GA--SPNVSNVKVETPLHMAARAG--HTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT---TC--CSCCSSSCCCCHHHHHHHHT--CHHHHHHHHHHTCCSSCCCTTSC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc---CC--CCCCCCCCCCCHHHHHHHcC--CHHHHHHHHhCCCCCCCCCCCCC
Confidence 4456677899999999988876633322 10 00111223345888888874 5888888887532 222
Q ss_pred ccccccCC-CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhh-----cCCCCCcccccccC
Q psy15713 140 LTSEKSTE-GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYV-----KRPQGALPFALNSS 213 (426)
Q Consensus 140 ~~~~~~~~-g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~g~~~l~~a~~ 213 (426)
.....++. |+.++++.+++...... ..+..+.||||+|+..|+.++|++|++.. .+..|.||+++|+.
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~ 155 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPN------LATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAK 155 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTT------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHH
Confidence 33333444 99999999988742111 22345679999999999999999999983 35679999999999
Q ss_pred CccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-cccccccccc
Q psy15713 214 LPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKS 292 (426)
Q Consensus 214 ~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~ 292 (426)
.++..+.+.++ ..|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+ +..++
T Consensus 156 ~g~~~~v~~Ll------~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~----- 224 (437)
T 1n11_A 156 YGKVRVAELLL------ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ----- 224 (437)
T ss_dssp TTCHHHHHHHH------HTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC-----
T ss_pred cCCHHHHHHHH------hCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC-----
Confidence 99865555543 3599999999999999999999999999999999999999999999999999 88888
Q ss_pred ccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHH
Q psy15713 293 TEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEIT 371 (426)
Q Consensus 293 ~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~ 371 (426)
.+ ++++|++.|++++. .+..|.||||+|+..|+.+++++|++.+.+.+ .+..+.++++.++..++.+++
T Consensus 225 ----~~----~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~ 294 (437)
T 1n11_A 225 ----VE----VARSLLQYGGSANA--ESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVA 294 (437)
T ss_dssp ----HH----HHHHHHHTTCCTTC--CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred ----HH----HHHHHHHcCCCCCC--CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 89 99999999999998 89999999999999999999999999988876 455677899999999999999
Q ss_pred hhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 372 QKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 372 ~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
++| +++|+++|.+|..|+||||+|+.+|+.++|++|+++|+|+|.+|+
T Consensus 295 ~~L-------l~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~ 342 (437)
T 1n11_A 295 DVL-------IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342 (437)
T ss_dssp HHH-------HHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCT
T ss_pred HHH-------HhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCC
Confidence 999 999999999999999999999999999999999999999999874
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.5e-39 Score=294.25 Aligned_cols=226 Identities=20% Similarity=0.136 Sum_probs=204.5
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhh-----cCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYV-----KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSAL 247 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpL 247 (426)
+..+.||||+|+..|+.+++++|++++ .+..|.||+|+|+..++....+.++ ..|++++.+|..|.|||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~~g~~~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFL------SKGADVNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH------HTTCCTTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH------HcCCCCCccCcccCCHH
Confidence 345668999999999999999999883 3457899999999988855555543 34999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCccc----------cccCccchhc-ccccccccccccCCchhHHHHHHHhhhh-ccccc
Q psy15713 248 HIACCEGHTDIVKYLLLNGASVHEK----------DRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLT-TEKDK 315 (426)
Q Consensus 248 h~Aa~~g~~~iv~~Ll~~ga~~~~~----------d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~ 315 (426)
|+|+..|+.+++++|+++|++++.. +..|.||||+ +..++ .+ ++++|++. |++++
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~~~~~~~ 176 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH---------VE----VLKILLDEMGADVN 176 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTC---------HH----HHHHHHHTSCCCTT
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCC---------HH----HHHHHHHhcCCCCC
Confidence 9999999999999999999999987 7889999999 88888 89 99999987 99999
Q ss_pred chhhhhhhhHHHHHHHhhCc----hhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCccccc-CCCCCC
Q psy15713 316 DDLRSVLFPAMLQSAVMTGD----LKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLF-QGADLS 389 (426)
Q Consensus 316 ~~~~~~~g~t~L~~A~~~g~----~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~-~gad~n 389 (426)
. .+..|.||||+|+..++ .+++++|++++.+++ .+..+.++++.|+..++.+++++| ++ .|++++
T Consensus 177 ~--~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~~g~~~~ 247 (285)
T 1wdy_A 177 A--CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL-------LEQEHIEIN 247 (285)
T ss_dssp C--CCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH-------HHSSSCCTT
T ss_pred c--cCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH-------HhccCCCcc
Confidence 8 89999999999999999 899999999998887 455678899999999999999999 98 899999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 390 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 390 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
.+|..|+||||+|+..|+.+++++|+++|||++.+|.
T Consensus 248 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999999999999999999999983
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.5e-37 Score=262.59 Aligned_cols=158 Identities=28% Similarity=0.391 Sum_probs=148.7
Q ss_pred HHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy15713 178 AMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 257 (426)
Q Consensus 178 t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~ 257 (426)
+.|+.||+.|+.++|++||+. |+|+|.+|.+|+||||+|+..++.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~----------------------------------Gadvn~~d~~g~t~l~~a~~~~~~~ 51 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN----------------------------------GADVNASDSDGRTPLHHAAENGHKE 51 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC----------------------------------CCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 479999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCch
Q psy15713 258 IVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDL 336 (426)
Q Consensus 258 iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~ 336 (426)
++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. ++..|+||||+|+..|+.
T Consensus 52 ~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~---------~~----~v~~Ll~~gadvn~--~d~~G~TpLh~A~~~g~~ 116 (169)
T 4gpm_A 52 VVKLLISKGADVNAKDSDGRTPLHHAAENGH---------KE----VVKLLISKGADVNA--KDSDGRTPLHHAAENGHK 116 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHhcccchhhhccCCCCHHHHHHHcCC---------HH----HHHHHHHCcCCCCC--CCCCCCCHHHHHHHcCCH
Confidence 9999999999999999999999999 88888 99 99999999999999 999999999999999999
Q ss_pred hHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy15713 337 KRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL 416 (426)
Q Consensus 337 ~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 416 (426)
+++++| +++|+|++.+|.+|+||||+|+.+|+.+++++|++
T Consensus 117 ~~v~~L---------------------------------------l~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 117 EVVKLL---------------------------------------ISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHH---------------------------------------HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999 99999999999999999999999999999999999
Q ss_pred CCCCCCC
Q psy15713 417 NGASVHE 423 (426)
Q Consensus 417 ~Gad~~~ 423 (426)
+|||++.
T Consensus 158 ~GA~ie~ 164 (169)
T 4gpm_A 158 QGGWLEH 164 (169)
T ss_dssp C------
T ss_pred CCCCcCC
Confidence 9999975
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.8e-37 Score=284.95 Aligned_cols=198 Identities=19% Similarity=0.143 Sum_probs=182.8
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCC---CCCCCCCCCcHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGAD---LSIKDADQRSALHI 249 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~---~~~~d~~g~TpLh~ 249 (426)
+..+.||||+||..|+.++|++|++. |++ ++.+|..|+||||+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~~~~g~t~L~~ 51 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGF----------------------------------SAGHEYLDLQNDLGQTALHL 51 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHH----------------------------------HTTSGGGGCCCTTSCCHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc----------------------------------CCCcccccccCCCCCCHHHH
Confidence 45677999999999999999999999 777 88899999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhccc---------------
Q psy15713 250 ACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEK--------------- 313 (426)
Q Consensus 250 Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~--------------- 313 (426)
||..|+.++|++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++
T Consensus 52 A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~---------~~----~v~~Ll~~~~~~~~~~~~~~~~~~~~ 118 (282)
T 1oy3_D 52 AAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRA---------HT----CACVLLQPRPSHPRDASDTYLTQSQD 118 (282)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTC---------HH----HHHHHSSSCCSSCCCC----------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------cc----hhHhhhccCCCCchhhHHHHhhcccc
Confidence 999999999999999999999999999999999 88888 88 99999998765
Q ss_pred --------------------------------ccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhh--ccCcch
Q psy15713 314 --------------------------------DKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEF--SMNPHL 359 (426)
Q Consensus 314 --------------------------------~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~--~~~~~l 359 (426)
++. .+..|.||||+|+..|+.+++++|++++.+++... .+.+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA--ENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp -------------------------CCCGGGGTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred cCcchhcchhhhccccccchhhhhhhhhhhhcCCC--cCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 344 67789999999999999999999999999887543 478999
Q ss_pred hHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 360 TTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 360 ~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+.|+..++.+++++| +++|++++.+|..|+||||+|+.+|+.+++++|+++|||++.+|+
T Consensus 197 ~~A~~~~~~~~v~~L-------l~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 256 (282)
T 1oy3_D 197 HLAVEAQAASVLELL-------LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGG 256 (282)
T ss_dssp HHHHHTTCHHHHHHH-------HHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-
T ss_pred HHHHHcCCHHHHHHH-------HHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCC
Confidence 999999999999999 999999999999999999999999999999999999999999874
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=288.01 Aligned_cols=219 Identities=19% Similarity=0.198 Sum_probs=172.1
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhh-------------cCCCCCcccccccCCccc-cccccccCCcccccCCCCCCCCCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYV-------------KRPQGALPFALNSSLPQE-ITQKLDIDGVPSLFQGADLSIKDA 241 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~-------------~~~~g~~~l~~a~~~~~~-~~~~~~~~~~~~l~~g~~~~~~d~ 241 (426)
+.++|+.||..|+.++|++||+.. .+..+.||++.++..+.. ..... ++..|+++|.+|.
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~------Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAK------VPASGLGVNVTSQ 84 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------CCCCTTCCCT
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHH------HHHCCCCCCCcCC
Confidence 448999999999999999999863 234688999999887653 22222 2446999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS 320 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 320 (426)
+|+||||+||..|+.++|++|+++|++++.++..|.||+|+ +..++ .+ ++++|+++|++++. ++
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~---------~~----~~~~Ll~~g~~~n~--~d 149 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGH---------FQ----VVKCLLDSNAKPNK--KD 149 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC---------HH----HHHHHHHTTCCSCC--CC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccCh---------HH----HHHHHHHCCCCCCC--CC
Confidence 99999999999999999999999999999999999999999 88888 88 99999999999999 99
Q ss_pred hhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHH
Q psy15713 321 VLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSAL 399 (426)
Q Consensus 321 ~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL 399 (426)
..|+||||+|+..|+.+++++|++++++++ .+..+.++++.|+..++.+++++| +++|+|+|.+|..|+|||
T Consensus 150 ~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~L-------l~~Gad~~~~d~~G~TpL 222 (269)
T 4b93_B 150 LSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELL-------LLHGASVQVLNKRQRTAV 222 (269)
T ss_dssp TTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH-------HHTTCCSCCCCTTSCCSG
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHH-------HHCCCCCCCcCCCCCCHH
Confidence 999999999999999999999999999887 556678899999999999999999 999999999999999999
Q ss_pred HHHHHcCC-HHHHHHHHHCCCCCC
Q psy15713 400 HIACCEGH-TDIVKYLLLNGASVH 422 (426)
Q Consensus 400 ~~A~~~g~-~~iv~~Ll~~Gad~~ 422 (426)
|+|+++++ .+++++|.+.+++++
T Consensus 223 ~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 223 DCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp GGSCTTCHHHHHTTC---------
T ss_pred HHHHhCCcHHHHHHHHHHhchhhh
Confidence 99998886 466666667776554
No 7
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.2e-37 Score=290.30 Aligned_cols=243 Identities=19% Similarity=0.076 Sum_probs=189.2
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhh----------------------------
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYV---------------------------- 199 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~---------------------------- 199 (426)
|++++|+.|++.. .+++...+..|.||||+||..|+.++|++|++++
T Consensus 36 g~~~~V~~LL~~G-----advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 4g8k_A 36 EDVDLVQQLLEGG-----ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKL 110 (337)
T ss_dssp TCHHHHHHHHHHT-----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHCC-----CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHH
Confidence 4455555555442 2222222334567888888888888888887752
Q ss_pred ----------cCCCCCcccccccCCccccccccccCCcccccCCCCCCC----------CCCCCCcHHHHHHHcCCHHHH
Q psy15713 200 ----------KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI----------KDADQRSALHIACCEGHTDIV 259 (426)
Q Consensus 200 ----------~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~----------~d~~g~TpLh~Aa~~g~~~iv 259 (426)
.+..|.||+++|+..++....+.++. .|++++. .+..|.||||+|+..|+.++|
T Consensus 111 ~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~------~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v 184 (337)
T 4g8k_A 111 FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK------RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 184 (337)
T ss_dssp HHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH------TTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHH
T ss_pred hhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHH------cCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHH
Confidence 34568899999988888544444332 3666554 456789999999999999999
Q ss_pred HHHHH-CCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchh
Q psy15713 260 KYLLL-NGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLK 337 (426)
Q Consensus 260 ~~Ll~-~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~ 337 (426)
++||+ .|++++.+|..|.||+|. +.... ......++++|+++|++++. ++..|+||||+|+..|+.+
T Consensus 185 ~~LL~~~gad~n~~d~~g~t~l~~~~~~~~---------~~~~~~i~~lLl~~gad~n~--~d~~g~t~L~~a~~~~~~~ 253 (337)
T 4g8k_A 185 KILLDEMGADVNACDNMGRNALIHALLSSD---------DSDVEAITHLLLDHGADVNV--RGERGKTPLILAVEKKHLG 253 (337)
T ss_dssp HHHHHHSCCCTTCCCTTSCCHHHHHHHHSC---------TTTHHHHHHHHHHTTCCTTC--CCGGGCCHHHHHHHTTCHH
T ss_pred HHHHhccCCCcCccCCCCCcHHHHHHHHcC---------cccHHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhhhhH
Confidence 99996 599999999999999998 55444 33334489999999999998 8999999999999999999
Q ss_pred HHHHHhhc-hhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy15713 338 RMEEIKGY-VSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 415 (426)
Q Consensus 338 ~v~~L~~~-~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll 415 (426)
+++.|+.. +.+++ .+..+.++++.|+..++.+++++| +++|+|+|.+ ||||+|+++|+.++|++||
T Consensus 254 ~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L-------l~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 254 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL-------CKRGASTDCG-----DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH-------HTTSCSSTTC-----CHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH-------HHCCCCCCCC-----CHHHHHHHcCCHHHHHHHH
Confidence 99999875 56665 455677899999999999999999 9999999865 5999999999999999999
Q ss_pred HCCCCCCCC
Q psy15713 416 LNGASVHEK 424 (426)
Q Consensus 416 ~~Gad~~~~ 424 (426)
++|||+|..
T Consensus 322 ~~GA~~d~~ 330 (337)
T 4g8k_A 322 SHGAKEDFH 330 (337)
T ss_dssp HTTCCC---
T ss_pred HCcCCCCCC
Confidence 999999863
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1e-36 Score=288.75 Aligned_cols=231 Identities=21% Similarity=0.212 Sum_probs=201.6
Q ss_pred hHHhhhhHHHHHHHHhcCCHHHHHHHhhh------hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCC
Q psy15713 170 DLRSVLFPAMLQSAVMTGDLKRMEEIKGY------VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQ 243 (426)
Q Consensus 170 ~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~------~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g 243 (426)
...+..+.++||.||+.|+.+.|+.|+.. ..+..|.||||+|+..++..+.+.+++ .|++++.+|..|
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g 91 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQ------HGADVHAKDKGG 91 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTC
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCC
Confidence 35566777999999999999999988876 345678999999999988655555443 499999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccch-----
Q psy15713 244 RSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDD----- 317 (426)
Q Consensus 244 ~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~----- 317 (426)
+||||+|+..|+.+++++|+++|++++..|..|.||||+ +..++ .+ ++++|+++|++++..
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~~~~~g~ 158 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR---------VE----VCSLLLSHGADPTLVNCHGK 158 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTCCCTTSC
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCccccCCCC
Confidence 999999999999999999999999999999999999999 88888 88 999999999887641
Q ss_pred -----------------------------------------------hhhhhhhHHHHHHHhh---CchhHHHHHhhchh
Q psy15713 318 -----------------------------------------------LRSVLFPAMLQSAVMT---GDLKRMEEIKGYVS 347 (426)
Q Consensus 318 -----------------------------------------------~~~~~g~t~L~~A~~~---g~~~~v~~L~~~~~ 347 (426)
..+..|.||||+|+.. +..+++++|++.+.
T Consensus 159 ~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~ 238 (351)
T 3utm_A 159 SAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 238 (351)
T ss_dssp CHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTC
T ss_pred cchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCC
Confidence 0234578999999999 55899999999998
Q ss_pred hhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 348 NIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 348 ~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+++ .+..+.++++.|+..++.+++++| +++|+++|.+|..|+||||+|+.+|+.+++++|+++|+|++.+|+
T Consensus 239 ~~~~~~~~g~t~L~~A~~~g~~~~v~~L-------l~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 311 (351)
T 3utm_A 239 NVNEKNKDFMTPLHVAAERAHNDVMEVL-------HKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISL 311 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHH-------HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CcCCcCCCCCCHHHHHHHcCCHHHHHHH-------HHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC
Confidence 887 455677899999999999999999 999999999999999999999999999999999999999999874
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=276.22 Aligned_cols=214 Identities=16% Similarity=0.145 Sum_probs=119.5
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhh-----hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHH
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGY-----VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIA 250 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~-----~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~A 250 (426)
|.||||+||..|+.++|++|++. ..+..|.||||+|+..++..+.+.++ ..|++++.+|.+|+||||+|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll------~~g~~~~~~~~~g~t~L~~A 76 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL------KHGAQVNGVTADWHTPLFNA 76 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH------HTTCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH------HCCCCCCCCCCCCCCHHHHH
Confidence 45999999999999999999998 22334555555555555433333222 22555555555555555555
Q ss_pred HHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHH
Q psy15713 251 CCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQS 329 (426)
Q Consensus 251 a~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~ 329 (426)
+..|+.+++++|+++|++++. +..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~ 140 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGH---------VE----CVNSLIAYGGNIDH--KISHLGTPLYL 140 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CBTTTBCHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCc---------HH----HHHHHHHcCCCCCc--CCCCCCCHHHH
Confidence 555555555555555555543 2235555555 44444 55 55555555555555 55555555555
Q ss_pred HHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy15713 330 AVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 409 (426)
Q Consensus 330 A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~ 409 (426)
|+..|+.+++++|++++.+++.+..+.++++.|+..++.+++++| +++|+|++.+|..|+||||+|+.++ +
T Consensus 141 A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~L-------l~~gad~~~~d~~g~tpl~~A~~~~--~ 211 (261)
T 2xai_A 141 ACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLL-------MDFGADTQAKNAEGKRPVELVPPES--P 211 (261)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHH-------HHTTCCTTCCCTTSCCGGGGSCTTC--T
T ss_pred HHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHH-------HHcCCCCCCcCCCCCChhhhccccc--c
Confidence 555555555555555555554444444555555555555555555 5555555555555555555555333 2
Q ss_pred HHHHHHHCCCC
Q psy15713 410 IVKYLLLNGAS 420 (426)
Q Consensus 410 iv~~Ll~~Gad 420 (426)
++++|+++++.
T Consensus 212 ~~~~ll~~~~~ 222 (261)
T 2xai_A 212 LAQLFLEREGP 222 (261)
T ss_dssp HHHHHHHC-CC
T ss_pred HHHHHHhccCC
Confidence 55555555443
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.2e-37 Score=276.82 Aligned_cols=220 Identities=19% Similarity=0.073 Sum_probs=169.9
Q ss_pred HhhhhHHHHHHHHhcC-------------CHHHHHHHhhhh------cCCCCCcccccccCCccccccccccCCcccccC
Q psy15713 172 RSVLFPAMLQSAVMTG-------------DLKRMEEIKGYV------KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQ 232 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g-------------~~~~v~~Ll~~~------~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~ 232 (426)
.+..|.||||+|+..| +.+++++|++.+ .+..|.||||+|+..++..+.+.++ ..
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll------~~ 79 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL------EA 79 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH------HT
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH------Hc
Confidence 3445667777777766 777777777762 2456777777777777754444433 23
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhh
Q psy15713 233 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA-SVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLT 310 (426)
Q Consensus 233 g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 310 (426)
|++++.+|..|+||||+|+..|+.+++++|+++|+ +++.++..|.||||+ +..++ .+ ++++|+++
T Consensus 80 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ 146 (253)
T 1yyh_A 80 SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV---------EG----MLEDLINS 146 (253)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTC---------SS----HHHHHHHT
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcCh---------HH----HHHHHHHc
Confidence 99999999999999999999999999999999987 999999999999999 88888 89 99999999
Q ss_pred cccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCC
Q psy15713 311 TEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLS 389 (426)
Q Consensus 311 ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n 389 (426)
|++++. .+..|.||||+|+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++++| +++|++++
T Consensus 147 g~~~~~--~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~L-------l~~ga~~~ 217 (253)
T 1yyh_A 147 HADVNA--VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL-------LDHFANRD 217 (253)
T ss_dssp TCCTTC--BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH-------HHTTCCTT
T ss_pred CCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHH-------HHcCCCcc
Confidence 999998 89999999999999999999999999998887 456678899999999999999999 99999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy15713 390 IKDADQRSALHIACCEGHTDIVKYLLLNGA 419 (426)
Q Consensus 390 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Ga 419 (426)
.+|..|+||||+|+++|+.+++++|.+..-
T Consensus 218 ~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 999999999999999999999999987643
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=7.1e-36 Score=267.88 Aligned_cols=203 Identities=23% Similarity=0.172 Sum_probs=172.5
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+||..|+.++|++|++.. ...|.+++.+|..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~------------------------------~~~~~~~~~~~~~g~t~L~~A~ 54 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLF------------------------------QQGGRELDIYNNLRQTPLHLAV 54 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHH------------------------------HHTTCCSCCCCTTSCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHH------------------------------HhcCCCCCcccccCCCHHHHHH
Confidence 4556779999999999999999999830 0128888888889999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcc----cccchhhhhhhhHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTE----KDKDDLRSVLFPAM 326 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga----~~~~~~~~~~g~t~ 326 (426)
..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|++.++ +++. .+..|.||
T Consensus 55 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~Ll~~~~~~~~~~~~--~~~~g~t~ 119 (241)
T 1k1a_A 55 ITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRS---------PT----CLRALLDSAAPGTLDLEA--RNYDGLTA 119 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHSCTTSCCTTC--CCTTSCCH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCccccccc--cCcCCCcH
Confidence 9999999999999999999889999999999 77777 88 8888888887 5665 77888999
Q ss_pred HHHHHhhCchhHHHHHhhchhhhhhh--hccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 327 LQSAVMTGDLKRMEEIKGYVSNIVYE--FSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 404 (426)
Q Consensus 327 L~~A~~~g~~~~v~~L~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~ 404 (426)
||+|+..|+.+++++|++++.++... ..+.++++.++..++.+++++| +++|++++.+|..|+||||+|+.
T Consensus 120 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~g~~~~~~~~~g~t~L~~A~~ 192 (241)
T 1k1a_A 120 LHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL-------LQHGANVNAQMYSGSSALHSASG 192 (241)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH-------HHTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHH-------HHcCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999998888877633 4577888888888999999999 89999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCC
Q psy15713 405 EGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 405 ~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
.|+.+++++|+++|+|++.+|+
T Consensus 193 ~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 193 RGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCHHHHHHHHhcCCCCCCcCC
Confidence 9999999999999999988774
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-36 Score=274.55 Aligned_cols=224 Identities=18% Similarity=0.200 Sum_probs=202.1
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhhhc------CCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGYVK------RPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 248 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~------~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh 248 (426)
.+.||||.|++.|+.++|++|++... +..|.||||+|+..++....+.++ ..|++++.+|.+|.||||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll------~~g~~~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL------RHGADPVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH------HTTCCTTCCCTTCCCHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH------HcCCCCcccCCCCCCHHH
Confidence 45699999999999999999999833 456899999999999865555544 349999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhh--------
Q psy15713 249 IACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLR-------- 319 (426)
Q Consensus 249 ~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~-------- 319 (426)
+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~~~~~~ 142 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK---------VK----ALKFLYKRGANVNL--RRKTKEDQE 142 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCCCCHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC---------HH----HHHHHHHhCCCccc--ccccHHHHH
Confidence 9999999999999999999999999999999999 88888 89 99999999999887 4
Q ss_pred --hhhhhHHHHHHHhhCchhHHHHHhhc-hhhhh-hhhccCcchhHHhhcCh----HHHHhhhccCCcccccCCCCCCCC
Q psy15713 320 --SVLFPAMLQSAVMTGDLKRMEEIKGY-VSNIV-YEFSMNPHLTTLISNLP----QEITQKLDIDGVPSLFQGADLSIK 391 (426)
Q Consensus 320 --~~~g~t~L~~A~~~g~~~~v~~L~~~-~~~~~-~~~~~~~~l~~~~~~~~----~~~~~~L~~~~~~~l~~gad~n~~ 391 (426)
+..|.||||+|+..|+.+++++|++. +.++. .+..+.++++.++..+. .+++++| +++|++++.+
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~L-------l~~g~~~~~~ 215 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLL-------LDHGADVNVR 215 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHH-------HHTTCCSSCC
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHH-------HHcCCCCCCc
Confidence 67799999999999999999999986 77766 34566778888888888 8999999 9999999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCC
Q psy15713 392 DADQRSALHIACCEGHTDIVKYLLL-NGASVHEKDR 426 (426)
Q Consensus 392 d~~g~TpL~~A~~~g~~~iv~~Ll~-~Gad~~~~d~ 426 (426)
|..|+||||+|+..|+.+++++|++ +|+|++.+|+
T Consensus 216 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~ 251 (285)
T 1wdy_A 216 GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 251 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCC
Confidence 9999999999999999999999999 8999999874
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.3e-37 Score=274.19 Aligned_cols=216 Identities=19% Similarity=0.175 Sum_probs=182.8
Q ss_pred HHHHHHHhcCCHHHHHHHhhh------hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 178 AMLQSAVMTGDLKRMEEIKGY------VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 178 t~L~~Aa~~g~~~~v~~Ll~~------~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
+|||.|+..|+.+.+++|++. ..+..|.||||+|+..++....+.++ ..|++++.+|..|+||||+|+
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll------~~g~~~~~~~~~g~t~L~~A~ 81 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLL------QLGVPVNDKDDAGWSPLHIAA 81 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH------HTTCCSCCCCTTSCCHHHHHH
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHH------HhCCCCCCcCCCCCCHHHHHH
Confidence 566666666666666666654 22445666666666655533333322 239999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~g~t~L~~A 146 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR---------HE----IAVMLLEGGANPDA--KDHYDATAMHRA 146 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHH
T ss_pred HcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--cCCCCCcHHHHH
Confidence 9999999999999999999999999999999 88888 88 99999999999988 889999999999
Q ss_pred HhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 409 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~ 409 (426)
+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++++| +++|++++.+|..|.||||+|+..++.+
T Consensus 147 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~ga~~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 147 AAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFL-------VTQGASIYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH-------HHTTCCSCCCCTTSCCHHHHSCHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHH-------HHCCCCCCCCCCCCCCHHHHHHhhHHHH
Confidence 99999999999999988876 445677899999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHCCCCC
Q psy15713 410 IVKYLLLNGASV 421 (426)
Q Consensus 410 iv~~Ll~~Gad~ 421 (426)
++++|+++|+++
T Consensus 220 i~~lL~~~~a~i 231 (231)
T 3aji_A 220 LKRLAEGEEASM 231 (231)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHccccccC
Confidence 999999999875
No 14
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3e-36 Score=267.17 Aligned_cols=215 Identities=17% Similarity=0.046 Sum_probs=190.8
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++++.+++.. .+.....+..+.||||+|+..|+.++|++|+++
T Consensus 2 g~~~~i~~Ll~~g-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------- 47 (223)
T 2f8y_A 2 DAPAVISDFIYQG-----ASLHNQTDRTGETALHLAARYSRSDAAKRLLEA----------------------------- 47 (223)
T ss_dssp ---CCEETTEETT-----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-----------------------------
T ss_pred CcHHHHHHHHHcC-----CCcccccCCCCCchHHHHHHcCCHHHHHHHHHc-----------------------------
Confidence 4556666665542 233333355677999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCccccccCccchhc-ccccccccccccCCchhHHHHHH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA-SVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVR 305 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~ 305 (426)
|++++.+|..|+||||+|+..|+.+++++|+++++ +++..+..|.||||+ +..++ .+ +++
T Consensus 48 -----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~ 109 (223)
T 2f8y_A 48 -----SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAV---------EG----MLE 109 (223)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTC---------HH----HHH
T ss_pred -----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCc---------HH----HHH
Confidence 99999999999999999999999999999999987 899999999999999 88888 88 999
Q ss_pred HhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccC
Q psy15713 306 LLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQ 384 (426)
Q Consensus 306 ~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~ 384 (426)
+|+++|++++. .+..|.||||+|+..|+.+++++|++++.++. .+..+.++++.|+..++.+++++| +++
T Consensus 110 ~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~ 180 (223)
T 2f8y_A 110 DLINSHADVNA--VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL-------LDH 180 (223)
T ss_dssp HHHHTTCCTTC--BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH-------HHT
T ss_pred HHHHcCCCCcC--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHH-------HHc
Confidence 99999999998 88999999999999999999999999988877 445677899999999999999999 999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy15713 385 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHE 423 (426)
Q Consensus 385 gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~ 423 (426)
|++++.+|..|.||||+|+.+|+.+++++|+++|+....
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 999999999999999999999999999999999998654
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.7e-36 Score=267.14 Aligned_cols=198 Identities=24% Similarity=0.165 Sum_probs=164.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+||..|+.+++++|+++ |++++..+..|.||||+|+.
T Consensus 8 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~ 53 (237)
T 3b7b_A 8 HQNKRSPLHAAAEAGHVDICHMLVQA----------------------------------GANIDTCSEDQRTPLMEAAE 53 (237)
T ss_dssp SCCSCCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTCCCHHHHHHH
T ss_pred cCCCCCHHHHHHHcCcHHHHHHHHHc----------------------------------CCCcCccCCCCCCHHHHHHH
Confidence 44567999999999999999999999 88888888888888888888
Q ss_pred cCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc-ccccchhhhhhhhHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT-EKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~g~t~L~~A 330 (426)
.|+.+++++|+++|++++.++..|.||||+ +..++ .+ ++++|++.| .+++. .+..|.||||+|
T Consensus 54 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~~~~~~~~--~~~~g~t~L~~A 118 (237)
T 3b7b_A 54 NNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGH---------YE----VVQYLLSNGQMDVNC--QDDGGWTPMIWA 118 (237)
T ss_dssp TTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTC---------HH----HHHHHHTTTCCCTTC--CCTTSCCHHHHH
T ss_pred hCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC---------HH----HHHHHHhCCCCCccc--CCCCCCCHHHHH
Confidence 888888888888888888888888888888 77777 77 888888887 66766 777788888888
Q ss_pred HhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 409 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~ 409 (426)
+..++.+++++|++++.++. .+..+.++++.++..+..+++++| +++|++++.+|..|.||||+|+..|+.+
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L-------l~~g~~~~~~~~~g~t~L~~A~~~~~~~ 191 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL-------LAAKCDLHAVNIHGDSPLHIAARENRYD 191 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH-------HTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH-------HHcCCCCCCcCCCCCCHHHHHHHhCCHh
Confidence 88888888888888877766 345566778888888888888888 8888888888888888888888888888
Q ss_pred HHHHHHHCCCCCCCCCC
Q psy15713 410 IVKYLLLNGASVHEKDR 426 (426)
Q Consensus 410 iv~~Ll~~Gad~~~~d~ 426 (426)
++++|+++|+|++.+|+
T Consensus 192 ~v~~Ll~~gad~~~~d~ 208 (237)
T 3b7b_A 192 CVVLFLSRDSDVTLKNK 208 (237)
T ss_dssp HHHHHHTTTCCTTCCCT
T ss_pred HHHHHHHcCCCCCccCC
Confidence 88888888888887764
No 16
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.7e-37 Score=281.93 Aligned_cols=196 Identities=15% Similarity=0.063 Sum_probs=113.8
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+|+..|+.++|++|+++ |++++..| |+||||+|+
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~--g~t~L~~A~ 70 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNA----------------------------------GALKNLLE--NEFPLHQAA 70 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT----------------------------------TGGGSCCT--TCCHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhC----------------------------------CCCCCCCC--CCCHHHHHH
Confidence 345677999999999999999999999 55555442 455555555
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhh-hHHHHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLF-PAMLQS 329 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g-~t~L~~ 329 (426)
..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. .+..| .||||+
T Consensus 71 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~---------~~----~v~~Ll~~ga~~~~--~~~~g~~t~L~~ 135 (285)
T 3kea_A 71 TLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN---------MQ----TVKLFVKKNWRLMF--YGKTGWKTSFYH 135 (285)
T ss_dssp TSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHCGGGGG--CSSSGGGSHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC---------HH----HHHHHHhcCCCCCc--cCCCCCCCHHHH
Confidence 5555555555555555555555555555555 44444 55 55555555555554 44444 455555
Q ss_pred HHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcH-HHHHHHcCCH
Q psy15713 330 AVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSA-LHIACCEGHT 408 (426)
Q Consensus 330 A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~Tp-L~~A~~~g~~ 408 (426)
|+..|+.+++++|++++.+......+.++++.|+..++.+++++| +++|+++|.+|..|+|| ||+|+.+|+.
T Consensus 136 A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~L-------l~~gad~n~~~~~g~t~~L~~A~~~~~~ 208 (285)
T 3kea_A 136 AVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILL-------LDYMTSTNTNNSLLFIPDIKLAIDNKDI 208 (285)
T ss_dssp HHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHH-------HHHHHHTCTTCCCBCCTTHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHH-------HHcCCCCCcccCCCCChHHHHHHHcCCH
Confidence 555555555555555554443322334455555555555555555 55555555555555554 5555555555
Q ss_pred HHHHHHHHCCCCCCCCC
Q psy15713 409 DIVKYLLLNGASVHEKD 425 (426)
Q Consensus 409 ~iv~~Ll~~Gad~~~~d 425 (426)
+++++|+++|||++.+|
T Consensus 209 ~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 209 EMLQALFKYDINIYSAN 225 (285)
T ss_dssp HHHHHHTTSCBCSTTTT
T ss_pred HHHHHHHHcCCCCCCCC
Confidence 55555555555555543
No 17
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.6e-37 Score=292.92 Aligned_cols=231 Identities=16% Similarity=0.169 Sum_probs=189.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhh---hcC-CCCCcccccccCCcccccccccc-CCcc-cccCCCCCCCCCCCCCcH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGY---VKR-PQGALPFALNSSLPQEITQKLDI-DGVP-SLFQGADLSIKDADQRSA 246 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~---~~~-~~g~~~l~~a~~~~~~~~~~~~~-~~~~-~l~~g~~~~~~d~~g~Tp 246 (426)
+..+.||||+|+..|+ +++++|+.. ..+ ..|.||||+|+..++....+.++ .... ++..|+++|.+|.+|.||
T Consensus 91 ~~~g~t~L~~Aa~~~~-~~~~~L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~Tp 169 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSY-AITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTP 169 (373)
T ss_dssp ---CCCHHHHHHHSSS-CCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCH
T ss_pred CCCCccHHHHHhcCCc-hHHHHhccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCH
Confidence 4456689999998554 788877764 334 57899999999988854433332 1111 235699999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc---ccccchhhhhh
Q psy15713 247 LHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT---EKDKDDLRSVL 322 (426)
Q Consensus 247 Lh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g---a~~~~~~~~~~ 322 (426)
||+|+..|+.++|++|+++|++++.+|..|.||||+ +..++ .+ ++++|++++ ++++. .+..
T Consensus 170 L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~---------~~----~v~~Ll~~~~~~~~~~~--~d~~ 234 (373)
T 2fo1_E 170 LMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRD---------FG----MMVYMLNSTKLKGDIEE--LDRN 234 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTC---------HH----HHHHHTTSHHHHHTTSC--CCTT
T ss_pred HHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCC---------HH----HHHHHHhcCccccChhh--cCCC
Confidence 999999999999999999999999999999999999 88888 88 999999988 67777 8888
Q ss_pred hhHHHHHHHhhC---chhHHHHHhhchhhhhh---------hhccCcchhHHhhcChHHHHhhhccCCcccccCC-CCCC
Q psy15713 323 FPAMLQSAVMTG---DLKRMEEIKGYVSNIVY---------EFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQG-ADLS 389 (426)
Q Consensus 323 g~t~L~~A~~~g---~~~~v~~L~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~g-ad~n 389 (426)
|.||||+|+..+ +.+++++|++++.++.. +..+.++++.|+..++.+++++| ++.| +++|
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~L-------l~~~~~~~n 307 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL-------VGEKGSNKD 307 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHH-------HHHSCCCTT
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHH-------HHhcCCCcc
Confidence 999999999888 88999999988877753 33567889999999999999999 8765 9999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 390 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 390 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
.+|..|+||||+|+.+|+.++|++|+++|+|++.+|+
T Consensus 308 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 9999999999999999999999999999999988774
No 18
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=273.74 Aligned_cols=221 Identities=17% Similarity=0.167 Sum_probs=172.9
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhh-----hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGY-----VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSA 246 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~-----~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~Tp 246 (426)
.+..+.||||+||..|+.++|++|++. ..+..|.||||+|+..++..+.+.++ ..|++++.+|..|.||
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll------~~ga~~~~~~~~g~t~ 128 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL------KHGAQVNGVTADWHTP 128 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH------HTTCCSSCCCTTCCCH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH------HCCCCCCCCCCCCCCH
Confidence 345567999999999999999999998 34556888888888888755544443 3488888888888888
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhH
Q psy15713 247 LHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPA 325 (426)
Q Consensus 247 Lh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t 325 (426)
||+|+..|+.+++++|+++|++++..+ .|.||||+ +..++ .+ ++++|+++|++++. .+..|.|
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~---------~~----~v~~Ll~~g~~~~~--~d~~g~t 192 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGH---------VE----CVNSLIAYGGNIDH--KISHLGT 192 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CBTTTBC
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCC---------HH----HHHHHHHCCCCCCC--cCCCCCC
Confidence 888888888888888888888887544 48888888 77777 77 88888888888877 7888888
Q ss_pred HHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 326 MLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 405 (426)
Q Consensus 326 ~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~ 405 (426)
|||+|+..|+.+++++|++++.+++.+..+.++++.|+..++.+++++| +++|+|++.+|.+|+||||+|+
T Consensus 193 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~gad~~~~d~~g~t~l~~A~-- 263 (285)
T 3d9h_A 193 PLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLL-------MDFGADTQAKNAEGKRPVELVP-- 263 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHH-------HHTTCCTTCCCTTSCCGGGGSC--
T ss_pred HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH-------HHCCCCCCCcCCCCCCHHHHhc--
Confidence 8888888888888888888887777666677788888888888888888 8888888888888888888888
Q ss_pred CCHHHHHHHHHC-CCCCCC
Q psy15713 406 GHTDIVKYLLLN-GASVHE 423 (426)
Q Consensus 406 g~~~iv~~Ll~~-Gad~~~ 423 (426)
++.+++++|+++ |+++..
T Consensus 264 ~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 264 PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp TTSHHHHHHHHHC------
T ss_pred CccHHHHHHHHhhccCCCC
Confidence 456788888877 777654
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.1e-36 Score=288.69 Aligned_cols=220 Identities=15% Similarity=0.121 Sum_probs=197.3
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhh-----hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGY-----VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSAL 247 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~-----~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpL 247 (426)
+..+.||||+||..|+.++|++|++. ..+..|.||||+|+..++..+.+.+++ .|++++. .+|.|||
T Consensus 17 d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~--~~g~t~L 88 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLAS------VGEVHSL--WHGQKPI 88 (364)
T ss_dssp CHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHH------HCCCCCC--BTTBCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHH------CCCCccc--cCCCCHH
Confidence 45677999999999999999999988 445679999999999998655555443 4775554 5799999
Q ss_pred HHHHHcCCHHHHHHHHHC----CCCCcc-----------------ccccCccchhc-cccc--ccccccccCCchhHHHH
Q psy15713 248 HIACCEGHTDIVKYLLLN----GASVHE-----------------KDRVQLTVLTN-IRGE--LTSEKSTEGGYDLVGAV 303 (426)
Q Consensus 248 h~Aa~~g~~~iv~~Ll~~----ga~~~~-----------------~d~~g~tpL~~-a~~~--~~~~~~~~~~~~~~~~i 303 (426)
|+|+..|+.++|++|+++ |++++. +|..|.||||+ +..+ + .+ +
T Consensus 89 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~---------~~----~ 155 (364)
T 3ljn_A 89 HLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEY---------LE----M 155 (364)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGG---------HH----H
T ss_pred HHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCch---------HH----H
Confidence 999999999999999999 888887 89999999999 8888 7 88 9
Q ss_pred HHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhh-----hh-hhhccCcchhHHhhcChHHHHhhhccC
Q psy15713 304 VRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSN-----IV-YEFSMNPHLTTLISNLPQEITQKLDID 377 (426)
Q Consensus 304 v~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~-----~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~ 377 (426)
+++|+++|++++. .+..|.||||+|+..|+.+++++|++++.+ ++ .+..+.++++.|+..++.+++++|
T Consensus 156 v~~Ll~~ga~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L--- 230 (364)
T 3ljn_A 156 IKILVQLGASPTA--KDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF--- 230 (364)
T ss_dssp HHHHHHHTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH---
T ss_pred HHHHHHcCCCCcc--cCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH---
Confidence 9999999999998 899999999999999999999999999887 55 455677899999999999999999
Q ss_pred CcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy15713 378 GVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVH 422 (426)
Q Consensus 378 ~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~ 422 (426)
+++|+|+|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 231 ----l~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 231 ----VEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp ----HTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred ----HHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 99999999999999999999999999999999999998764
No 20
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-35 Score=272.54 Aligned_cols=196 Identities=21% Similarity=0.209 Sum_probs=181.0
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 254 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g 254 (426)
.+.||||.||..|+.++|++|++. |+++|..|.+|.||||+||..|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~~g 84 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLER----------------------------------GADINYANVDGLTALHQACIDD 84 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH----------------------------------CCCTTCBCTTCCBHHHHHHHTT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCcccCCCCCCHHHHHHHcC
Confidence 345899999999999999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhh
Q psy15713 255 HTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMT 333 (426)
Q Consensus 255 ~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~ 333 (426)
+.++|++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|+..
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 85 NVDMVKFLVENGANINQPDNEGWIPLHAAASCGY---------LD----IAEYLISQGAHVGA--VNSEGDTPLDIAEEE 149 (299)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHCCSH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---------HH----HHHHHHhCCCCCCC--cCCCCCCHHHHHHhc
Confidence 9999999999999999999999999999 88888 99 99999999999998 899999999999999
Q ss_pred CchhHHHHHhhc-hhhhh---------------------------hhhccCcchhHHhhcChHHHHhhhccCCcccccCC
Q psy15713 334 GDLKRMEEIKGY-VSNIV---------------------------YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQG 385 (426)
Q Consensus 334 g~~~~v~~L~~~-~~~~~---------------------------~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~g 385 (426)
++.+++++++.. +.+.. ....+.++++.|+..++.+++++| +++|
T Consensus 150 ~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L-------l~~g 222 (299)
T 1s70_B 150 AMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL-------IQAR 222 (299)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH-------HTTT
T ss_pred chHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH-------HHcC
Confidence 999999988653 32222 123567899999999999999999 9999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 386 ADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 386 ad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+++|.+|..|+||||+|+.+|+.+++++|+++|+|++.+|+
T Consensus 223 ~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 223 YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999999999999999999874
No 21
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4.2e-35 Score=276.63 Aligned_cols=229 Identities=19% Similarity=0.137 Sum_probs=197.0
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhhhcC------CCCCcccccccCCccccccccccCC----------------------
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGYVKR------PQGALPFALNSSLPQEITQKLDIDG---------------------- 226 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~------~~g~~~l~~a~~~~~~~~~~~~~~~---------------------- 226 (426)
.+.|+||.||+.|++++|++||+++.+ ..|+||||+|+..|+..+.+++++.
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 356999999999999999999998543 2489999999999996555554431
Q ss_pred -----cccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccc----------cccCccchhc-cccccccc
Q psy15713 227 -----VPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEK----------DRVQLTVLTN-IRGELTSE 290 (426)
Q Consensus 227 -----~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~----------d~~g~tpL~~-a~~~~~~~ 290 (426)
..++..+++++.+|..|+||||+|+..|+.+++++|+++|++++.. +..|.||||+ +..++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~--- 180 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH--- 180 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC---
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC---
Confidence 0123357788889999999999999999999999999999998754 4568999999 88888
Q ss_pred ccccCCchhHHHHHHHhhh-hcccccchhhhhhhhHHHHHHHhhCc----hhHHHHHhhchhhhh-hhhccCcchhHHhh
Q psy15713 291 KSTEGGYDLVGAVVRLLNL-TTEKDKDDLRSVLFPAMLQSAVMTGD----LKRMEEIKGYVSNIV-YEFSMNPHLTTLIS 364 (426)
Q Consensus 291 ~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~g~t~L~~A~~~g~----~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~ 364 (426)
.+ ++++|++ .|++++. .+..|.|+++.++..+. .+++++|++++.+++ .+..+.++++.++.
T Consensus 181 ------~~----~v~~LL~~~gad~n~--~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 181 ------VE----VLKILLDEMGADVNA--CDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE 248 (337)
T ss_dssp ------HH----HHHHHHHHSCCCTTC--CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred ------HH----HHHHHHhccCCCcCc--cCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 99 9999996 5999998 99999999999887654 458899999998887 45567789999999
Q ss_pred cChHHHHhhhccCCcccccC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q psy15713 365 NLPQEITQKLDIDGVPSLFQ-GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKD 425 (426)
Q Consensus 365 ~~~~~~~~~L~~~~~~~l~~-gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d 425 (426)
.+..+++++| +.. |+++|.+|.+|+||||+|+++|+.++|++|+++|||+|.+|
T Consensus 249 ~~~~~~v~~L-------l~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 249 KKHLGLVQRL-------LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp TTCHHHHHHH-------HTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred hhhhHHHHHH-------HHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 9999999999 874 89999999999999999999999999999999999999875
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8.4e-35 Score=258.70 Aligned_cols=195 Identities=19% Similarity=0.117 Sum_probs=164.9
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCC-CCCCCCcHHHHHHHcC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI-KDADQRSALHIACCEG 254 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~-~d~~g~TpLh~Aa~~g 254 (426)
+.||||+||..|+.++|++|++. |.++.. +|..|+||||+|+..|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------~~~~~~~~~~~g~t~L~~A~~~~ 47 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHS----------------------------------KPSLLLQKDQDGRIPLHWSVSFQ 47 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHH----------------------------------CGGGTTCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHhCCHHHHHHHHhc----------------------------------CccccccCCCCCCCHHHHHHHcC
Confidence 45899999999999999999999 665543 7888888888888888
Q ss_pred CHHHHHHHHHCC--CCCcc-ccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc--ccccchhhhhhhhHHHH
Q psy15713 255 HTDIVKYLLLNG--ASVHE-KDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT--EKDKDDLRSVLFPAMLQ 328 (426)
Q Consensus 255 ~~~iv~~Ll~~g--a~~~~-~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g--a~~~~~~~~~~g~t~L~ 328 (426)
+.+++++|+++| ++++. .+..|.||||+ +..++ .+ ++++|+++| ++++. .+..|.||||
T Consensus 48 ~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~~~--~~~~g~t~L~ 112 (228)
T 2dzn_A 48 AHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGN---------LE----VVKSLYDRPLKPDLNK--ITNQGVTCLH 112 (228)
T ss_dssp CHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCC---------HH----HHHHHHSSSSCCCTTC--CCTTCCCHHH
T ss_pred CHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCC---------HH----HHHHHHhCCCCccccc--CCcCCCCHHH
Confidence 888888888888 55555 77888888888 77777 78 888888888 66665 7788888888
Q ss_pred HHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCC-CCCCCCCCCCCcHHHHHHHcC
Q psy15713 329 SAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQG-ADLSIKDADQRSALHIACCEG 406 (426)
Q Consensus 329 ~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~g-ad~n~~d~~g~TpL~~A~~~g 406 (426)
+|+..|+.+++++|++++.++. .+..+.++++.++..++.+++++| ++.| +++|.+|..|+||||+|+..|
T Consensus 113 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 113 LAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL-------CGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH-------HTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred HHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH-------HhcCcccccCcCCCCCCHHHHHHHcC
Confidence 8888888888888888887776 344566788888888888888888 9999 999999999999999999999
Q ss_pred CHHHHHHHH-HCCCCCCCCCC
Q psy15713 407 HTDIVKYLL-LNGASVHEKDR 426 (426)
Q Consensus 407 ~~~iv~~Ll-~~Gad~~~~d~ 426 (426)
+.+++++|+ ++|+|++.+|+
T Consensus 186 ~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 186 HGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp CHHHHHHHHHHHCCCSCCBCT
T ss_pred CHHHHHHHHHhcCCCCCccCC
Confidence 999999999 88999998874
No 23
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=272.12 Aligned_cols=205 Identities=15% Similarity=0.060 Sum_probs=165.7
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhh-----cCCCCCcccccccCCcccccccc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYV-----KRPQGALPFALNSSLPQEITQKL 222 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~g~~~l~~a~~~~~~~~~~~ 222 (426)
|+.++++.+++... +++ ..+..+.||||+|+..|+.++|++|++++ .+..|.||+++|+..++..+.+.
T Consensus 70 g~~~~v~~Ll~~g~-----~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (285)
T 3d9h_A 70 GHQLSLRNLISQGW-----AVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNL 143 (285)
T ss_dssp TCHHHHHHHHHTTC-----CSC-EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHCCC-----CCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHH
Confidence 66677777666431 111 23445779999999999999999999983 45679999999999888655555
Q ss_pred ccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHH
Q psy15713 223 DIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVG 301 (426)
Q Consensus 223 ~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~ 301 (426)
++ ..|++++..+ +|.||||+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+
T Consensus 144 Ll------~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~---------~~--- 204 (285)
T 3d9h_A 144 LL------QHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ---------RA--- 204 (285)
T ss_dssp HH------HTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC---------HH---
T ss_pred HH------HCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc---------HH---
Confidence 43 3488888654 59999999999999999999999999999999999999999 88888 89
Q ss_pred HHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcc
Q psy15713 302 AVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVP 380 (426)
Q Consensus 302 ~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~ 380 (426)
++++|++.|++++ .+..|.||||+|+..++.+++++|++++.++. .+..+.++++.++ ...+++++|
T Consensus 205 -~v~~Ll~~ga~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~L------ 272 (285)
T 3d9h_A 205 -CVKKLLESGADVN---QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLF------ 272 (285)
T ss_dssp -HHHHHHHTTCCTT---CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHH------
T ss_pred -HHHHHHHCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHH------
Confidence 9999999999988 47789999999999999999999999999887 4556677888887 346889999
Q ss_pred cccC-CCCCCC
Q psy15713 381 SLFQ-GADLSI 390 (426)
Q Consensus 381 ~l~~-gad~n~ 390 (426)
+++ |+++..
T Consensus 273 -l~~~~a~l~~ 282 (285)
T 3d9h_A 273 -LEREGASLPK 282 (285)
T ss_dssp -HHHC------
T ss_pred -HHhhccCCCC
Confidence 887 777654
No 24
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-36 Score=288.46 Aligned_cols=222 Identities=19% Similarity=0.148 Sum_probs=191.2
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhh--------h-----hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCC
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKG--------Y-----VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKD 240 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~--------~-----~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d 240 (426)
..+.||||+||..|+.++|++|+. . ..+..|.||||+|+..++..+.+.++ ..|++++.+|
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll------~~ga~~~~~~ 196 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM------KAGADPTIYN 196 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH------HTTCCSCCCC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHH------HCCCCCcccC
Confidence 456788888888888888887763 2 34567888888888888755555543 3499999999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCC---CCCccccccCccchhc-cccc---ccccccccCCchhHHHHHHHhhhhccc
Q psy15713 241 ADQRSALHIACCEGHTDIVKYLLLNG---ASVHEKDRVQLTVLTN-IRGE---LTSEKSTEGGYDLVGAVVRLLNLTTEK 313 (426)
Q Consensus 241 ~~g~TpLh~Aa~~g~~~iv~~Ll~~g---a~~~~~d~~g~tpL~~-a~~~---~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 313 (426)
..|.||||+|+..|+.+++++|+++| ++++..|..|.||||+ +..+ + .+ ++++|+++|++
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~---------~~----~v~~Ll~~g~~ 263 (373)
T 2fo1_E 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQ---------VA----SAKLLVEKGAK 263 (373)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTH---------HH----HHHHHHHHTCC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcch---------HH----HHHHHHHCCCC
Confidence 99999999999999999999999998 8999999999999999 7665 6 77 99999999999
Q ss_pred ccch------hhhhhhhHHHHHHHhhCchhHHHHHhhch-hhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCC
Q psy15713 314 DKDD------LRSVLFPAMLQSAVMTGDLKRMEEIKGYV-SNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQG 385 (426)
Q Consensus 314 ~~~~------~~~~~g~t~L~~A~~~g~~~~v~~L~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~g 385 (426)
++.. ..+..|.||||+|+..|+.+++++|++.+ .+++ .+..+.++++.|+..++.+++++| +++|
T Consensus 264 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~L-------l~~g 336 (373)
T 2fo1_E 264 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL-------IQQG 336 (373)
T ss_dssp SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHH-------HHTT
T ss_pred cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHH-------HHcC
Confidence 8751 14568999999999999999999999876 6666 456677899999999999999999 9999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy15713 386 ADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASV 421 (426)
Q Consensus 386 ad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~ 421 (426)
++++.+|..|+||||+|+.+|+.+++++|+++|++.
T Consensus 337 ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 337 ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999999999999999999874
No 25
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1e-34 Score=258.97 Aligned_cols=193 Identities=16% Similarity=0.146 Sum_probs=177.1
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
+.||||+|+..|+.++|++|++. .|++++.+|.+|+||||+|+..|+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~---------------------------------~g~~~~~~~~~g~t~L~~A~~~g~ 49 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKF---------------------------------EGCEVHQRGAMGETALHIAALYDN 49 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTT---------------------------------TCSCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh---------------------------------cCCCcccCCCCCCCHHHHHHHcCC
Confidence 56999999999999999999986 389999999999999999999999
Q ss_pred HHHHHHHHHCCCCC-----ccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhh--------
Q psy15713 256 TDIVKYLLLNGASV-----HEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV-------- 321 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~-----~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~-------- 321 (426)
.+++++|+++|+++ +.+|..|.||||+ +..++ .+ ++++|+++|++++. .+.
T Consensus 50 ~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~~~~~~~~ 114 (232)
T 2rfa_A 50 LEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN---------VN----LVRALLARGASVSA--RATGSVFHYRP 114 (232)
T ss_dssp HHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCCSGGGSCCT
T ss_pred HHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC---------HH----HHHHHHhCCCCCCc--ccCCcceeecc
Confidence 99999999999987 7778899999999 88888 99 99999999999987 544
Q ss_pred -----hhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHH----hhhccCCcccccCCCCC---
Q psy15713 322 -----LFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEIT----QKLDIDGVPSLFQGADL--- 388 (426)
Q Consensus 322 -----~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~----~~L~~~~~~~l~~gad~--- 388 (426)
.|.||||+|+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++ ++| +++|+++
T Consensus 115 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~L-------l~~g~~~~~~ 187 (232)
T 2rfa_A 115 HNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLL-------LSYDGGDHLK 187 (232)
T ss_dssp TCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHH-------HHTTCSCSSC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHH-------HhcCCchhhh
Confidence 79999999999999999999999999887 556778899999999999888 999 9999998
Q ss_pred ---CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Q psy15713 389 ---SIKDADQRSALHIACCEGHTDIVKYLLLNGASVHE 423 (426)
Q Consensus 389 ---n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~ 423 (426)
+.+|..|+||||+|+.+|+.+++++|+++|++...
T Consensus 188 ~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 188 SLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp CGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred hhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 58999999999999999999999999999987654
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=263.63 Aligned_cols=201 Identities=14% Similarity=0.041 Sum_probs=170.7
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhh-----cCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYV-----KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 248 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh 248 (426)
..+.||||+|+..|+.++|++|++++ .+..|.||+|+|+..++..+.+.++ ..|++++. +.+|.||||
T Consensus 34 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~~g~~~~~-~~~g~t~L~ 106 (261)
T 2xai_A 34 ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL------QHGASVQP-ESDLASPIH 106 (261)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH------HTTCCSSC-SCTTCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH------HCCCCCCC-CCCCCCHHH
Confidence 35669999999999999999999983 4557899999999988855555543 34888885 456999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHH
Q psy15713 249 IACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAML 327 (426)
Q Consensus 249 ~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L 327 (426)
+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. +..|.|||
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~---~~~g~t~L 170 (261)
T 2xai_A 107 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ---------RA----CVKKLLESGADVNQ---GKGQDSPL 170 (261)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC---------HH----HHHHHHHHTCCTTC---CBTTBCHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC---------HH----HHHHHHHcCCCCCC---CCCCCChH
Confidence 9999999999999999999999999999999999 88888 89 99999999999984 67899999
Q ss_pred HHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCC--------CCCCCCCCCCcH
Q psy15713 328 QSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGA--------DLSIKDADQRSA 398 (426)
Q Consensus 328 ~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~ga--------d~n~~d~~g~Tp 398 (426)
|+|+..++.+++++|++++.++. .+..+.++++.++..+ +++++| ++++. +++.+|..|.||
T Consensus 171 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~l-------l~~~~~~~l~~~~~~~~r~~~g~t~ 241 (261)
T 2xai_A 171 HAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLF-------LEREGPPSLMQLCRLRIRKCFGIQQ 241 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHH-------HHC-CCCCHHHHHHHHHHTTSCTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHH-------HhccCCccHHHHHHHHHHHHhchhc
Confidence 99999999999999999999887 4566777888887554 478888 66655 556889999999
Q ss_pred HHHHHHcC
Q psy15713 399 LHIACCEG 406 (426)
Q Consensus 399 L~~A~~~g 406 (426)
+|+|.+..
T Consensus 242 l~~~~~~~ 249 (261)
T 2xai_A 242 HHKITKLV 249 (261)
T ss_dssp GGGGGGSS
T ss_pred cccCcccC
Confidence 99987643
No 27
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.9e-34 Score=247.79 Aligned_cols=189 Identities=21% Similarity=0.168 Sum_probs=172.6
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 254 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g 254 (426)
.+.||||.|+..|+.+.++.|++. .+.+++..|.+|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~~g~t~L~~A~~~~ 50 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQD---------------------------------TTYQVDEVDTEGNTPLNIAVHNN 50 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTC---------------------------------TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccccHHHHHHHhccHHHHHHHHHc---------------------------------CCCCCCCCCCCCCCHHHHHHHcC
Confidence 345899999999999999999988 14599999999999999999999
Q ss_pred CHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhh-hhcccccchhhhhhhhHHHHHHHh
Q psy15713 255 HTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLN-LTTEKDKDDLRSVLFPAMLQSAVM 332 (426)
Q Consensus 255 ~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll-~~ga~~~~~~~~~~g~t~L~~A~~ 332 (426)
+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+ ..+++++. .+..|.||||+|+.
T Consensus 51 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~Ll~~~~~~~~~--~~~~g~t~L~~A~~ 115 (201)
T 3hra_A 51 DIEIAKALIDRGADINLQNSISDSPYLYAGAQGR---------TE----ILAYMLKHATPDLNK--HNRYGGNALIPAAE 115 (201)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHSCCCTTC--CCTTSCCSHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHhccCccccc--ccCCCCcHHHHHHH
Confidence 9999999999999999999999999999 88888 89 999999 56668887 88999999999999
Q ss_pred hCchhHHHHHhhch-hhhh-hhhccCcchhHHhhcCh-----HHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 333 TGDLKRMEEIKGYV-SNIV-YEFSMNPHLTTLISNLP-----QEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 405 (426)
Q Consensus 333 ~g~~~~v~~L~~~~-~~~~-~~~~~~~~l~~~~~~~~-----~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~ 405 (426)
.|+.+++++|++.+ .++. .+..+.++++.++..+. .+++++| +++|++++.+|..|+||||+|+.+
T Consensus 116 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~L-------l~~ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 116 KGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL-------MENGADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp TTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHH-------HHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHH-------HHCCCCCCccCCCCCCHHHHHHHc
Confidence 99999999999988 6665 44566788888887776 9999999 999999999999999999999999
Q ss_pred CCHHHHHHHHHCC
Q psy15713 406 GHTDIVKYLLLNG 418 (426)
Q Consensus 406 g~~~iv~~Ll~~G 418 (426)
|+.+++++|+++|
T Consensus 189 ~~~~~~~~Ll~~G 201 (201)
T 3hra_A 189 GYTEISKILAQYN 201 (201)
T ss_dssp TCHHHHHHHHTCC
T ss_pred CCHhHHHHHHhcC
Confidence 9999999999987
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.7e-34 Score=259.01 Aligned_cols=205 Identities=20% Similarity=0.174 Sum_probs=157.1
Q ss_pred cCCCCCcccccccCCccc------cccccccCCcc-cccCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcc
Q psy15713 200 KRPQGALPFALNSSLPQE------ITQKLDIDGVP-SLFQGADLSI-KDADQRSALHIACCEGHTDIVKYLLLNGASVHE 271 (426)
Q Consensus 200 ~~~~g~~~l~~a~~~~~~------~~~~~~~~~~~-~l~~g~~~~~-~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~ 271 (426)
++.+|.||||+|+..|.. .......+.+. ++..|++++. .|..|+||||+||..|+.++|++|+++|++++.
T Consensus 6 ~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 85 (253)
T 1yyh_A 6 RGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI 85 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 567899999999998721 11111222222 3456888865 489999999999999999999999999999999
Q ss_pred ccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcc-cccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhh
Q psy15713 272 KDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTE-KDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNI 349 (426)
Q Consensus 272 ~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~ 349 (426)
+|..|+||||+ +..++ .+ ++++|++.++ +++. .+..|.||||+|+..|+.+++++|++++.++
T Consensus 86 ~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (253)
T 1yyh_A 86 QDNMGRTPLHAAVSADA---------QG----VFQILIRNRATDLDA--RMHDGTTPLILAARLAVEGMLEDLINSHADV 150 (253)
T ss_dssp CCTTSCCHHHHHHHHTC---------HH----HHHHHHHSTTSCTTC--CCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCccc--cCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 99999999999 88888 89 9999999987 7777 8899999999999999999999999999888
Q ss_pred h-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 350 V-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 350 ~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+ .+..+.++++.|+..++.+++++| +++|++++.+|..|+||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~L-------l~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVL-------LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHH-------HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHH-------HHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccc
Confidence 7 445678899999999999999999 999999999999999999999999999999999999999999874
No 29
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.9e-35 Score=264.52 Aligned_cols=200 Identities=18% Similarity=0.076 Sum_probs=173.7
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.+++++|++.... .+++++.+|..|+||||+|+.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------------------------------~~~~~~~~~~~g~t~L~~A~~ 54 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKG------------------------------DLAFLNFQNNLQQTPLHLAVI 54 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----------------------------------CCCCCCCCTTCCCHHHHHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhc------------------------------cHHHhhccCCCCCCHHHHHHH
Confidence 44567899999999999999999887111 145899999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccc----hhhhhhhhHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKD----DLRSVLFPAML 327 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~----~~~~~~g~t~L 327 (426)
.|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|++.|+++.. ...+..|.|||
T Consensus 55 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 121 (236)
T 1ikn_D 55 TNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGC---------LA----SVGVLTQSCTTPHLHSILKATNYNGHTCL 121 (236)
T ss_dssp TTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTC---------HH----HHHHHHHSTTTTSSSCGGGCCCTTCCCHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHhcccchhHHHHhhccCCCCCCHH
Confidence 999999999999999999999999999999 88888 88 99999999876321 12677899999
Q ss_pred HHHHhhCchhHHHHHhhchhhhhhhh--ccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 328 QSAVMTGDLKRMEEIKGYVSNIVYEF--SMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 405 (426)
Q Consensus 328 ~~A~~~g~~~~v~~L~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~ 405 (426)
|+|+..|+.+++++|++++.++.... .+.++++.|+..++.+++++| +++|++++.+|..|+||||+|+.+
T Consensus 122 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L-------l~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 122 HLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLL-------LKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHH-------HTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH-------HHcCCCCCcccCCCCCHHHHHHcc
Confidence 99999999999999999998887432 678899999999999999999 999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCC
Q psy15713 406 GHTDIVKYLLLNGASVH 422 (426)
Q Consensus 406 g~~~iv~~Ll~~Gad~~ 422 (426)
|+.+++++|+++||++.
T Consensus 195 ~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 195 PSTRIQQQLGQLTLENL 211 (236)
T ss_dssp SCHHHHHHHHTTSCGGG
T ss_pred CchHHHHHHHHcchhhh
Confidence 99999999999999876
No 30
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=255.93 Aligned_cols=223 Identities=15% Similarity=0.046 Sum_probs=183.3
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhh-----hcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCC-CCCcHHH
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGY-----VKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDA-DQRSALH 248 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~-----~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~-~g~TpLh 248 (426)
.+.|+|+.|+..|+.+++++|++. ..+..|.||+++|+..++....+.++. .|.+++..+. .|.||||
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYIS------KGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCBTTTTBCHHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHH------cCCcchhhcCCcCCChhH
Confidence 344677777777777777777766 233456777777777776444333322 3888876654 4999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHH
Q psy15713 249 IACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAML 327 (426)
Q Consensus 249 ~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L 327 (426)
+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.|||
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~Ll~~~~~~~~--~~~~g~t~l 146 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH---------TS----IVAYLIAKGQDVDM--MDQNGMTPL 146 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCH---------HH----HHHHHHhcCCCccc--cCCCCCcHH
Confidence 9999999999999999999999999999999999 88888 88 99999999999988 899999999
Q ss_pred HHHHhhCc-hhHHHHHhhchhhhhhh--hccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 328 QSAVMTGD-LKRMEEIKGYVSNIVYE--FSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 404 (426)
Q Consensus 328 ~~A~~~g~-~~~v~~L~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~ 404 (426)
|+|+..++ .+++++|+..+.++... ..+.++++.|+..+..+++++| +++|++++.+|..|.||||+|++
T Consensus 147 ~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~g~~~~~~~~~g~t~l~~A~~ 219 (240)
T 3eu9_A 147 MWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLL-------LEAGANVDAQNIKGESALDLAKQ 219 (240)
T ss_dssp HHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHH-------HHHTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHH-------HHcCCCCCCcCCCCCCHHHHHHH
Confidence 99997776 89999999998887743 3677899999999999999999 99999999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCC
Q psy15713 405 EGHTDIVKYLLLNGASVHEKD 425 (426)
Q Consensus 405 ~g~~~iv~~Ll~~Gad~~~~d 425 (426)
.|+.+++++|+++|++....|
T Consensus 220 ~~~~~~v~~L~~~~~~~~~~N 240 (240)
T 3eu9_A 220 RKNVWMINHLQEARQAKGYDN 240 (240)
T ss_dssp TTCHHHHHHHHHHC-------
T ss_pred cCcHHHHHHHHHhhhccCcCC
Confidence 999999999999999876543
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=3e-35 Score=263.81 Aligned_cols=192 Identities=21% Similarity=0.160 Sum_probs=173.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+.
T Consensus 43 ~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 43 NNLRQTPLHLAVITTLPSVVRLLVTA----------------------------------GASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHc----------------------------------CCCccccCCCCCCHHHHHHH
Confidence 34567999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCC----CCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh-hhhhHH
Q psy15713 253 EGHTDIVKYLLLNGA----SVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS-VLFPAM 326 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga----~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~-~~g~t~ 326 (426)
.|+.+++++|+++++ +++..|..|.||||+ +..++ .+ ++++|++.|++++. .+ ..|.||
T Consensus 89 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~~g~t~ 153 (241)
T 1k1a_A 89 HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC---------QE----TVQLLLERGADIDA--VDIKSGRSP 153 (241)
T ss_dssp TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTTCCCH
T ss_pred cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCC---------HH----HHHHHHHcCCCccc--ccccCCCcH
Confidence 999999999999987 899999999999999 88888 88 99999999999988 67 789999
Q ss_pred HHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 327 LQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 405 (426)
Q Consensus 327 L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~ 405 (426)
||+|+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++++| +++|++++.+|..|+||||+|+..
T Consensus 154 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTL-------VRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHH-------HHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH-------HhcCCCCCCcCCCCCCHHHHHHhc
Confidence 999999999999999999998887 455678899999999999999999 999999999999999999999999
Q ss_pred CCHHHHHHHHHCCCC
Q psy15713 406 GHTDIVKYLLLNGAS 420 (426)
Q Consensus 406 g~~~iv~~Ll~~Gad 420 (426)
|+.++++.|+++++.
T Consensus 227 ~~~~i~~~l~~~~aS 241 (241)
T 1k1a_A 227 RVIDILRGKATRPAS 241 (241)
T ss_dssp HHHHHHTC-------
T ss_pred CcHHHHhhhccCCCC
Confidence 999999999998863
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.5e-34 Score=260.50 Aligned_cols=191 Identities=19% Similarity=0.112 Sum_probs=171.9
Q ss_pred hhHHHHHHHHhcCCHH----HHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCC----CCCCCCcH
Q psy15713 175 LFPAMLQSAVMTGDLK----RMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI----KDADQRSA 246 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~----~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~----~d~~g~Tp 246 (426)
+|.||||.||..|+.+ ++++|++. |++++. +|.+|+||
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~----------------------------------g~~i~~~~~~~d~~g~t~ 46 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN----------------------------------SKYLTDSAYTEGSTGKTC 46 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH----------------------------------TCCTTSGGGSBTTTTBCH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc----------------------------------CCCcccccccCCCCCCCH
Confidence 3679999999999998 45566667 999998 89999999
Q ss_pred HHHHHHc---CCHHHHHHHHHCCCCCccc-----------cccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc
Q psy15713 247 LHIACCE---GHTDIVKYLLLNGASVHEK-----------DRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT 311 (426)
Q Consensus 247 Lh~Aa~~---g~~~iv~~Ll~~ga~~~~~-----------d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g 311 (426)
||+|+.. |+.++|++|+++|++++.. |..|.||||+ +..++ .+ ++++|+++|
T Consensus 47 L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~---------~~----~v~~Ll~~g 113 (256)
T 2etb_A 47 LMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRS---------LQ----CVKLLVENG 113 (256)
T ss_dssp HHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTC---------HH----HHHHHHHTT
T ss_pred HHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCC---------HH----HHHHHHHcC
Confidence 9999999 9999999999999887643 4789999999 88888 99 999999999
Q ss_pred ccccchhhhhh-------------hhHHHHHHHhhCchhHHHHHhh---chhhhh-hhhccCcchhHHhh--cChHH---
Q psy15713 312 EKDKDDLRSVL-------------FPAMLQSAVMTGDLKRMEEIKG---YVSNIV-YEFSMNPHLTTLIS--NLPQE--- 369 (426)
Q Consensus 312 a~~~~~~~~~~-------------g~t~L~~A~~~g~~~~v~~L~~---~~~~~~-~~~~~~~~l~~~~~--~~~~~--- 369 (426)
++++. .+.. |.||||+|+..|+.+++++|++ ++.+++ .+..+.++++.|+. .+..+
T Consensus 114 a~~~~--~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 114 ADVHL--RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCTTC--CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred CCCCc--ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH
Confidence 99988 6665 9999999999999999999999 888887 45567788888887 77887
Q ss_pred ----HHhhhccCCcccccCCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy15713 370 ----ITQKLDIDGVPSLFQGADL-------SIKDADQRSALHIACCEGHTDIVKYLLLNGASV 421 (426)
Q Consensus 370 ----~~~~L~~~~~~~l~~gad~-------n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~ 421 (426)
++++| +++|+++ +.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 192 ~~~~iv~~L-------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 192 LVIHMYDGL-------LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHHHHH-------HHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-------HHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99999 9999999 999999999999999999999999999998764
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=4.2e-33 Score=234.16 Aligned_cols=156 Identities=23% Similarity=0.307 Sum_probs=148.5
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
..||||.|+..|+.+++++|++. |++++.+|..|+||||+|+. |+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~----------------------------------~~~~~~~~~~g~t~L~~A~~-~~ 49 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQN----------------------------------NVNVNAQNGFGRTALQVMKL-GN 49 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTS----------------------------------CCCTTCCCTTSCCHHHHCCS-SC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhC----------------------------------CCCccccCccCccHHHHHHc-Cc
Confidence 45899999999999999999999 99999999999999999999 99
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..|
T Consensus 50 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 50 PEIARRLLLRGANPDLKDRTGFAVIHDAARAGF---------LD----TLQTLLEFQADVNI--EDNEGNLPLHLAAKEG 114 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--cCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 88888 89 99999999999998 8999999999999999
Q ss_pred chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHH
Q psy15713 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGAD-LSIKDADQRSALHIACCEGHTDIVKY 413 (426)
Q Consensus 335 ~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad-~n~~d~~g~TpL~~A~~~g~~~iv~~ 413 (426)
+.+++++| +++|++ ++.+|..|.||||+|+.+|+.+++++
T Consensus 115 ~~~~v~~L---------------------------------------l~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~ 155 (162)
T 1ihb_A 115 HLRVVEFL---------------------------------------VKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155 (162)
T ss_dssp CHHHHHHH---------------------------------------HHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHH---------------------------------------HHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 99999999 888887 69999999999999999999999999
Q ss_pred HHHCCCC
Q psy15713 414 LLLNGAS 420 (426)
Q Consensus 414 Ll~~Gad 420 (426)
|+++|||
T Consensus 156 Ll~~GAd 162 (162)
T 1ihb_A 156 MQANGAG 162 (162)
T ss_dssp HHHTC--
T ss_pred HHHhCCC
Confidence 9999997
No 34
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.7e-33 Score=264.21 Aligned_cols=225 Identities=16% Similarity=0.071 Sum_probs=187.0
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhh-----cCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYV-----KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSAL 247 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~-----~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpL 247 (426)
+..+.||||+|+..|+.++|++|++++ .+..|.||||+|+..++..+.+.++ ..|++++..|..|.|||
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll------~~g~~~~~~~~~g~t~L 128 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL------KHGACVNAMDLWQFTPL 128 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH------HTTCCTTCCCTTCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH------HCCCCCCCCCCCCCCHH
Confidence 345669999999999999999999983 4567999999999999865555544 34999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccc---------------------------------------
Q psy15713 248 HIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGEL--------------------------------------- 287 (426)
Q Consensus 248 h~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~--------------------------------------- 287 (426)
|+|+..|+.+++++|+++|++++..+..|.||+++ +..+.
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQP 208 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCC
Confidence 99999999999999999999999877666655554 21100
Q ss_pred ------ccccccc---CCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCc
Q psy15713 288 ------TSEKSTE---GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNP 357 (426)
Q Consensus 288 ------~~~~~~~---~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~ 357 (426)
.+.++.. +..+ ++++|++.|++++. ++..|.||||+|+..|+.+++++|++++.+++ .+..+.+
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~----~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t 282 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQ----VAELLLRKGANVNE--KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQT 282 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHH----HHHHHHHTTCCTTC--CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCCHHHHHHHHhCccHHH----HHHHHHHcCCCcCC--cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 0011111 2255 99999999999998 89999999999999999999999999999887 5567788
Q ss_pred chhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy15713 358 HLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGAS 420 (426)
Q Consensus 358 ~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad 420 (426)
+++.|+..++.+++++| +++|+|++.+|..|+||+|+| +.+++++|.+.+..
T Consensus 283 ~L~~A~~~~~~~~v~~L-------l~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 283 ALHRAALAGHLQTCRLL-------LSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp HHHHHHHHTCHHHHHHH-------HHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred HHHHHHHcCcHHHHHHH-------HHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 99999999999999999 999999999999999999998 67899999987644
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=5.8e-33 Score=248.39 Aligned_cols=187 Identities=20% Similarity=0.175 Sum_probs=172.3
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 253 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~ 253 (426)
..+.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..
T Consensus 42 ~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 42 EDQRTPLMEAAENNHLEAVKYLIKA----------------------------------GALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTT----------------------------------TCCCCCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhC----------------------------------CCCCCCCCCCCCcHHHHHHHc
Confidence 3466999999999999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHCC-CCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHH
Q psy15713 254 GHTDIVKYLLLNG-ASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAV 331 (426)
Q Consensus 254 g~~~iv~~Ll~~g-a~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~ 331 (426)
|+.+++++|+++| ++++..+..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~g~t~L~~A~ 152 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH---------VD----LVKLLLSKGSDINI--RDNEENICLHWAA 152 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHH
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCC---------HH----HHHHHHHCCCCCCc--cCCCCCCHHHHHH
Confidence 9999999999998 8999999999999999 88888 88 99999999999988 8899999999999
Q ss_pred hhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15713 332 MTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDI 410 (426)
Q Consensus 332 ~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~i 410 (426)
..|+.+++++|++++.++. .+..+.++++.|+..+..+++++| +++|++++.+|..|+||||+|+.+|+.+.
T Consensus 153 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~gad~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 153 FSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF-------LSRDSDVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp HHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHH-------HTTTCCTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHH-------HHcCCCCCccCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999998887 445677899999999999999999 99999999999999999999999999866
Q ss_pred HHHHHH
Q psy15713 411 VKYLLL 416 (426)
Q Consensus 411 v~~Ll~ 416 (426)
+..|++
T Consensus 226 ~~~l~~ 231 (237)
T 3b7b_A 226 ALQMSK 231 (237)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 36
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.3e-32 Score=231.54 Aligned_cols=157 Identities=27% Similarity=0.311 Sum_probs=150.4
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 253 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~ 253 (426)
..+.++|+.||+.|+.++|++|+++ |++++.+|..|.||||+|+..
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~~ 57 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMAN----------------------------------GADVNAEDASGWTPLHLAAFN 57 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHHHT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHC----------------------------------CCCCCCCCCCCCCHHHHHHHc
Confidence 4456899999999999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHh
Q psy15713 254 GHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVM 332 (426)
Q Consensus 254 g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~ 332 (426)
|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|+.
T Consensus 58 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 58 GHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH---------LE----IVEVLLKNGADVNA--NDMEGHTPLHLAAM 122 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--CCCCCCCHHHHHHH
Confidence 99999999999999999999999999999 88888 89 99999999999998 89999999999999
Q ss_pred hCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q psy15713 333 TGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVK 412 (426)
Q Consensus 333 ~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~ 412 (426)
.|+.+++++| +++|++++.+|..|.||||+|+.+|+.++++
T Consensus 123 ~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 163 (169)
T 2y1l_E 123 FGHLEIVEVL---------------------------------------LKNGADVNAQDKFGKTAFDISIDNGNEDLAE 163 (169)
T ss_dssp TTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHH---------------------------------------HHcCCCCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 9999999999 8999999999999999999999999999999
Q ss_pred HHHHCC
Q psy15713 413 YLLLNG 418 (426)
Q Consensus 413 ~Ll~~G 418 (426)
+|+++|
T Consensus 164 ~L~~~G 169 (169)
T 2y1l_E 164 ILQKLN 169 (169)
T ss_dssp HHHTC-
T ss_pred HHHHcC
Confidence 999987
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.4e-33 Score=258.13 Aligned_cols=205 Identities=16% Similarity=0.103 Sum_probs=180.4
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++++.+++... +++.. .+.||||+|+..|+.++|++|+++
T Consensus 42 g~~~~v~~Ll~~g~-----~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------- 84 (285)
T 3kea_A 42 NNVRLVCTLLNAGA-----LKNLL---ENEFPLHQAATLEDTKIVKILLFS----------------------------- 84 (285)
T ss_dssp TCHHHHHHHHHTTG-----GGSCC---TTCCHHHHHTTSSSCHHHHHHHHT-----------------------------
T ss_pred CCHHHHHHHHhCCC-----CCCCC---CCCCHHHHHHHcCCHHHHHHHHHC-----------------------------
Confidence 77788888776632 22211 267999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccC-ccchhc-ccccccccccccCCchhHHHHHH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQ-LTVLTN-IRGELTSEKSTEGGYDLVGAVVR 305 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g-~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~ 305 (426)
|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..| .||||+ +..++ .+ +++
T Consensus 85 -----ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~---------~~----~v~ 146 (285)
T 3kea_A 85 -----GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND---------VS----IVS 146 (285)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTC---------HH----HHH
T ss_pred -----CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCC---------HH----HHH
Confidence 99999999999999999999999999999999999999999999 799999 88888 99 999
Q ss_pred HhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhh--hhccCcchhHHhhcChHHHHhhhccCCccccc
Q psy15713 306 LLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVY--EFSMNPHLTTLISNLPQEITQKLDIDGVPSLF 383 (426)
Q Consensus 306 ~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~ 383 (426)
+|+++|++... ...|.||||+|+..|+.+++++|++++.+++. ..+.+|+++.|+..++.+++++| ++
T Consensus 147 ~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~L-------l~ 216 (285)
T 3kea_A 147 YFLSEIPSTFD---LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQAL-------FK 216 (285)
T ss_dssp HHHTTSCTTCC---CSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHH-------TT
T ss_pred HHHhCCCcccc---ccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHH-------HH
Confidence 99999988743 23899999999999999999999999988873 33445569999999999999999 99
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy15713 384 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEK 424 (426)
Q Consensus 384 ~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~ 424 (426)
+|++++.+|. .|+..|+.+++++|+++|++++..
T Consensus 217 ~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~~ 250 (285)
T 3kea_A 217 YDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKSD 250 (285)
T ss_dssp SCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTTC
T ss_pred cCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCCc
Confidence 9999999983 567899999999999999988654
No 38
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.98 E-value=8.5e-34 Score=259.57 Aligned_cols=201 Identities=17% Similarity=0.169 Sum_probs=171.0
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCC----CCCCCCCcHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLS----IKDADQRSAL 247 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~----~~d~~g~TpL 247 (426)
.+..+.||||+||+.|+.++|+.|++... ..+++++ ..|..|+|||
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~------------------------------~~~~~~~~~~~~~~~~g~tpL 58 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQ------------------------------RSKKRLTDSEFKDPETGKTCL 58 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHH------------------------------HSCCCTTSGGGSCTTTCCCHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHh------------------------------hcccccCCcccccCcCCCCHH
Confidence 44567799999999999999999998511 1266666 4588999999
Q ss_pred HHHHHc---CCHHHHHHHHHCCCCC-------cc----ccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcc
Q psy15713 248 HIACCE---GHTDIVKYLLLNGASV-------HE----KDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTE 312 (426)
Q Consensus 248 h~Aa~~---g~~~iv~~Ll~~ga~~-------~~----~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga 312 (426)
|+||.. |+.++|++|+++|+++ +. .|..|.||||+ +..++ .+ ++++|+++|+
T Consensus 59 ~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~---------~~----~v~~Ll~~ga 125 (273)
T 2pnn_A 59 LKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRN---------MT----LVTLLVENGA 125 (273)
T ss_dssp HHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTC---------HH----HHHHHHHTTC
T ss_pred HHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCC---------HH----HHHHHHHCCC
Confidence 999987 9999999999998763 32 56789999999 88888 99 9999999999
Q ss_pred cccchhhhh--------------hhhHHHHHHHhhCchhHHHHHhh---chhhhh-hhhccCcchhHHhhcCh-------
Q psy15713 313 KDKDDLRSV--------------LFPAMLQSAVMTGDLKRMEEIKG---YVSNIV-YEFSMNPHLTTLISNLP------- 367 (426)
Q Consensus 313 ~~~~~~~~~--------------~g~t~L~~A~~~g~~~~v~~L~~---~~~~~~-~~~~~~~~l~~~~~~~~------- 367 (426)
+++. .+. .|.||||+|+..|+.+++++|++ ++.+++ .+..+.++++.|+..++
T Consensus 126 ~~~~--~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~ 203 (273)
T 2pnn_A 126 DVQA--AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTK 203 (273)
T ss_dssp CTTC--CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred CcCc--cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHH
Confidence 9998 665 79999999999999999999999 888887 45567788999988776
Q ss_pred --HHHHhhhccCCcccccCCCCCC-------CCCCCCCcHHHHHHHcCCHHHHHHHHHCCC-CCCCC
Q psy15713 368 --QEITQKLDIDGVPSLFQGADLS-------IKDADQRSALHIACCEGHTDIVKYLLLNGA-SVHEK 424 (426)
Q Consensus 368 --~~~~~~L~~~~~~~l~~gad~n-------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Ga-d~~~~ 424 (426)
.+++++| +++|+++| .+|..|+||||+|+.+|+.+++++|+++|| |+...
T Consensus 204 ~~~~~v~~L-------l~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 204 FVTSMYNEI-------LILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp HHHHHHHHH-------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHH-------HHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhh
Confidence 7999999 99999997 489999999999999999999999999999 77654
No 39
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.98 E-value=2.6e-33 Score=249.03 Aligned_cols=187 Identities=19% Similarity=0.165 Sum_probs=159.5
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCC--CCCCC-CCCCCCcHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQG--ADLSI-KDADQRSALH 248 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g--~~~~~-~d~~g~TpLh 248 (426)
.+..+.||||+|+..|+.+++++|++. | .+++. .+..|.||||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------~~~~~~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSK----------------------------------MENVNLDDYPDDSGWTPFH 77 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT----------------------------------CTTCCGGGCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhc----------------------------------cccccccccCCCCCCCHHH
Confidence 345567999999999999999999999 7 55555 7788889999
Q ss_pred HHHHcCCHHHHHHHHHCC--CCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhH
Q psy15713 249 IACCEGHTDIVKYLLLNG--ASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPA 325 (426)
Q Consensus 249 ~Aa~~g~~~iv~~Ll~~g--a~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t 325 (426)
+|+..|+.+++++|+++| ++++..|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.|
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~g~t 142 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKW---------FE----VSQFLIENGASVRI--KDKFNQI 142 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCSCC--CCTTSCC
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCC---------Hh----HHHHHHHcCCCccc--cCCCCCC
Confidence 999999999999999888 8888888889999988 77777 88 88888888888888 8888889
Q ss_pred HHHHHHhhCchhHHHHHhhch-hhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccc-cCCCCCCCCCCCCCcHHHHH
Q psy15713 326 MLQSAVMTGDLKRMEEIKGYV-SNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSL-FQGADLSIKDADQRSALHIA 402 (426)
Q Consensus 326 ~L~~A~~~g~~~~v~~L~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l-~~gad~n~~d~~g~TpL~~A 402 (426)
|||+|+..|+.+++++|++++ .+++ .+..+.++++.|+..++.+++++| + +.|+|++.+|..|+||||+|
T Consensus 143 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~L-------l~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL-------VEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHH-------HHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHH-------HHhcCCCCCccCCCCCcHHHHH
Confidence 999999999999999988888 6655 456677788888888888999988 9 89999999999999999999
Q ss_pred HHcCCHHHHHHHHHC
Q psy15713 403 CCEGHTDIVKYLLLN 417 (426)
Q Consensus 403 ~~~g~~~iv~~Ll~~ 417 (426)
+.. +++++|+++
T Consensus 216 ~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 216 LNE---QVKKFFLNN 227 (228)
T ss_dssp SST---THHHHHHTT
T ss_pred HHH---HHHHHHHhc
Confidence 765 577777754
No 40
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=1.3e-32 Score=232.47 Aligned_cols=160 Identities=16% Similarity=0.150 Sum_probs=153.3
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
+.||||.|+..|+.+++++|++. |.+++.+|..|.||||+|+..|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~----------------------------------~~~~~~~~~~g~t~L~~A~~~~~ 48 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQ----------------------------------ENVINHTDEEGFTPLMWAAAHGQ 48 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHH----------------------------------SSCTTCCCTTSCCHHHHHHHTTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHc----------------------------------CCCcCCCCCCCCCHHHHHHHCCC
Confidence 45899999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++..|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..|
T Consensus 49 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 49 IAVVEFLLQNGADPQLLGKGRESALSLACSKGY---------TD----IVKMLLDCGVDVNE--YDWNGGTPLLYAVHGN 113 (167)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC---------HH----HHHHHHHHTCCTTC--CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC---------HH----HHHHHHHCCCCCCc--CCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 88888 89 99999999999998 8999999999999999
Q ss_pred chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15713 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414 (426)
Q Consensus 335 ~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~L 414 (426)
+.+++++| +++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 114 ~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 114 HVKCVKML---------------------------------------LESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154 (167)
T ss_dssp CHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHH---------------------------------------HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 99999999 889999999999999999999999999999999
Q ss_pred HHCCCCCCC
Q psy15713 415 LLNGASVHE 423 (426)
Q Consensus 415 l~~Gad~~~ 423 (426)
+++++++..
T Consensus 155 ~~~~~~~~~ 163 (167)
T 3v31_A 155 ESHLLKLLQ 163 (167)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHHHHH
Confidence 999876543
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=1.2e-32 Score=243.93 Aligned_cols=172 Identities=21% Similarity=0.167 Sum_probs=161.9
Q ss_pred CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhh
Q psy15713 233 GADLSIK-DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLT 310 (426)
Q Consensus 233 g~~~~~~-d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ 310 (426)
|++++.. |.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|++.
T Consensus 14 g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ 80 (223)
T 2f8y_A 14 GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA---------QG----VFQILIRN 80 (223)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHB
T ss_pred CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHc
Confidence 9999876 8999999999999999999999999999999999999999999 88888 89 99999999
Q ss_pred cc-cccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCC
Q psy15713 311 TE-KDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADL 388 (426)
Q Consensus 311 ga-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~ 388 (426)
++ +++. .+..|.||||+|+..++.+++++|++++.++. .+..+.++++.++..++.+++++| +++|+++
T Consensus 81 ~~~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~g~~~ 151 (223)
T 2f8y_A 81 RATDLDA--RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL-------LKNGANK 151 (223)
T ss_dssp TTSCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH-------HHTTCCT
T ss_pred CCCCccc--CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHH-------HHcCCCC
Confidence 87 7777 88899999999999999999999999988877 455678899999999999999999 9999999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 389 SIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 389 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+.+|..|.||||+|+.+|+.+++++|+++|+|++.+|+
T Consensus 152 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 189 (223)
T 2f8y_A 152 DMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 189 (223)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 99999999999999999999999999999999998874
No 42
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.2e-32 Score=233.79 Aligned_cols=161 Identities=20% Similarity=0.203 Sum_probs=152.9
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCC-CCCCCCCCCcHHHHHHHcCC
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGAD-LSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~-~~~~d~~g~TpLh~Aa~~g~ 255 (426)
.+|||.|+..|+.+++++|++. +.+ ++.+|..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~----------------------------------~~~~~~~~~~~g~t~L~~A~~~~~ 48 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRK----------------------------------GDNLVNKPDERGFTPLIWASAFGE 48 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTT----------------------------------CSGGGGCCCTTSCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHc----------------------------------CcccccCCCCCCCCHHHHHHHcCC
Confidence 4799999999999999999999 666 89999999999999999999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..|
T Consensus 49 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 49 IETVRFLLEWGADPHILAKERESALSLASTGGY---------TD----IVGLLLERDVDINI--YDWNGGTPLLYAVRGN 113 (172)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHTTTCCTTC--CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC---------HH----HHHHHHHcCCCCCC--CCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 88888 99 99999999999998 8999999999999999
Q ss_pred chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15713 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414 (426)
Q Consensus 335 ~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~L 414 (426)
+.+++++| +++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 114 ~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (172)
T 3v30_A 114 HVKCVEAL---------------------------------------LARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154 (172)
T ss_dssp CHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHH---------------------------------------HHcCCCccccCCCCCCHHHHHHHhCcHHHHHHH
Confidence 99999999 899999999999999999999999999999999
Q ss_pred HHCCCCCCCCC
Q psy15713 415 LLNGASVHEKD 425 (426)
Q Consensus 415 l~~Gad~~~~d 425 (426)
+++|+++..++
T Consensus 155 ~~~~~~~~~~~ 165 (172)
T 3v30_A 155 ENHILKLFQSN 165 (172)
T ss_dssp HHHHHHHSCC-
T ss_pred HHHHHHHhccc
Confidence 99999887654
No 43
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=1.4e-32 Score=244.97 Aligned_cols=199 Identities=22% Similarity=0.216 Sum_probs=178.6
Q ss_pred CCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccch
Q psy15713 201 RPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280 (426)
Q Consensus 201 ~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL 280 (426)
...+.+|++.|+..|+....+.++.. .+..++.+|.+|.||||+|+..|+.+++++|+++|++++.+|..|+|||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~-----~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 77 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILA-----DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPL 77 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHH-----CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHh-----chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHH
Confidence 34578999999999984433332221 1344778899999999999999999999999999999999999999999
Q ss_pred hc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcc
Q psy15713 281 TN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPH 358 (426)
Q Consensus 281 ~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~ 358 (426)
|+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..++.+++++|++.+.++. .+..+.++
T Consensus 78 ~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 142 (231)
T 3aji_A 78 HIAASAGX---------DE----IVKALLVKGAHVNA--VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA 142 (231)
T ss_dssp HHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHcCH---------HH----HHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 99 88888 89 99999999999998 89999999999999999999999999988877 44567789
Q ss_pred hhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 359 LTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 359 l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
++.++..++.+++++| +++|++++.+|..|+||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 143 L~~A~~~~~~~~v~~L-------l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 143 MHRAAAKGNLKMVHIL-------LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203 (231)
T ss_dssp HHHHHHHTCHHHHHHH-------HHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHcCCHHHHHHH-------HhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999 999999999999999999999999999999999999999998874
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=1.5e-32 Score=237.59 Aligned_cols=159 Identities=23% Similarity=0.158 Sum_probs=152.9
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------~~~~~~~~~~g~t~L~~A~ 76 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVEN----------------------------------FDKLEDKDIEGSTALIWAV 76 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHH----------------------------------HCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHh----------------------------------ccccccccccCccHHHHHH
Confidence 455678999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 77 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A 141 (192)
T 2rfm_A 77 KNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGY---------SE----MSYFLLEHGANVND--RNLEGETPLIVA 141 (192)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCSSC--CCTTCCCHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---------HH----HHHHHHHCCCCCCC--CCCCCCCHHHHH
Confidence 9999999999999999999999999999999 88888 89 99999999999998 999999999999
Q ss_pred HhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDI 410 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~i 410 (426)
+..|+.+++++| +++|++++.+|..|.||||+|+..|+.++
T Consensus 142 ~~~~~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 182 (192)
T 2rfm_A 142 SKYGRSEIVKKL---------------------------------------LELGADISARDLTGLTAEASARIFGRQEV 182 (192)
T ss_dssp HHHTCHHHHHHH---------------------------------------HHTTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHH---------------------------------------HHCCCCCCCcCCCCCCHHHHHHHhCcHHH
Confidence 999999999999 89999999999999999999999999999
Q ss_pred HHHHHHCC
Q psy15713 411 VKYLLLNG 418 (426)
Q Consensus 411 v~~Ll~~G 418 (426)
+++|+++|
T Consensus 183 v~~Ll~~~ 190 (192)
T 2rfm_A 183 IKIFTEVR 190 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999875
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=9.1e-33 Score=253.54 Aligned_cols=201 Identities=16% Similarity=0.115 Sum_probs=161.6
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++++.+++... ........+..+.||||+||..|+.++|++|+++
T Consensus 20 g~~~~v~~Ll~~g~---~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------- 67 (282)
T 1oy3_D 20 QHEPFLDFLLGFSA---GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA----------------------------- 67 (282)
T ss_dssp TCHHHHHHHHHHHT---TSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------------------------
T ss_pred CCHHHHHHHHhcCC---CcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------------------------
Confidence 44555555554421 1111123345677999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC---------------------------------------
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGAS--------------------------------------- 268 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~--------------------------------------- 268 (426)
|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 68 -----ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (282)
T 1oy3_D 68 -----GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142 (282)
T ss_dssp -----TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------------
T ss_pred -----CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhh
Confidence 999999999999999999999999999999998865
Q ss_pred --------CccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhh-hhhHHHHHHHhhCchhH
Q psy15713 269 --------VHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV-LFPAMLQSAVMTGDLKR 338 (426)
Q Consensus 269 --------~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~-~g~t~L~~A~~~g~~~~ 338 (426)
++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+. .|.||||+|+..|+.++
T Consensus 143 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~---------~~----~v~~Ll~~g~~~~~--~~~~~g~tpL~~A~~~~~~~~ 207 (282)
T 1oy3_D 143 RDEDWRLQLEAENYDGHTPLHVAVIHKD---------AE----MVRLLRDAGADLNK--PEPTCGRTPLHLAVEAQAASV 207 (282)
T ss_dssp -CCCGGGGTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHTCCTTC--CCTTTCCCHHHHHHHTTCHHH
T ss_pred hhhhhhhcCCCcCCCCcCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--CCCCCCcCHHHHHHHcCCHHH
Confidence 77889999999999 88888 89 99999999999998 664 59999999999999999
Q ss_pred HHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 339 MEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 407 (426)
Q Consensus 339 v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~ 407 (426)
+++|++++.+++ .+..+.++++.|+..++.+++++| +++|++++.+|..|.|||++|.....
T Consensus 208 v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~L-------l~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 208 LELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL-------RAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHH-------HHTTCCCCCCC---------------
T ss_pred HHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHH-------HHcCCCcCcCCCcccccccccCCccc
Confidence 999999999887 456678899999999999999999 99999999999999999999987653
No 46
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=7.5e-33 Score=252.32 Aligned_cols=205 Identities=18% Similarity=0.095 Sum_probs=152.8
Q ss_pred cCCCCCcccccccCCccccccccccCCcc--cccCCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHHCCCCCccccccC
Q psy15713 200 KRPQGALPFALNSSLPQEITQKLDIDGVP--SLFQGADLSIKDADQRSALHIACCEGHT-DIVKYLLLNGASVHEKDRVQ 276 (426)
Q Consensus 200 ~~~~g~~~l~~a~~~~~~~~~~~~~~~~~--~l~~g~~~~~~d~~g~TpLh~Aa~~g~~-~iv~~Ll~~ga~~~~~d~~g 276 (426)
++.++.+||+.|+..|+..+.+.+++.-. .-.....++..+..|.||||+|+..++. .++++|+++|+++|.+|.+|
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G 86 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDG 86 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTS
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCC
Confidence 45567789999999999655555443211 0011223677888999999999998876 58999999999999999999
Q ss_pred ccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhc
Q psy15713 277 LTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFS 354 (426)
Q Consensus 277 ~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~ 354 (426)
+||||+ +..++ .+ ++++|++.|++++. .+..|.||+|+|+..++.+++++|++++.+++ .+..
T Consensus 87 ~TpLh~A~~~g~---------~~----~v~~Ll~~~a~~~~--~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~ 151 (269)
T 4b93_B 87 SSPLHVAALHGR---------AD----LIPLLLKHGANAGA--RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS 151 (269)
T ss_dssp CCHHHHHHHTTC---------TT----HHHHHHHTTCCTTC--CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCHHHHHHHcCc---------HH----HHHHHHhcCCCcCc--cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCC
Confidence 999999 88888 99 99999999999998 89999999999999999999999999998887 4566
Q ss_pred cCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 355 MNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 355 ~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+.++++.|+..++.+++++| +++|+|+|.+|..|+||||+|+.+|+.++|++|+++|||++.+|+
T Consensus 152 g~TpL~~A~~~g~~~~v~~L-------l~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 152 GNTPLIYACSGGHHELVALL-------LQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp CCCHHHHHHHTTCGGGHHHH-------HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred CCCHHHHHHHCCCHHHHHHH-------HHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 77899999999999999999 999999999999999999999999999999999999999999885
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=4.2e-34 Score=272.70 Aligned_cols=225 Identities=16% Similarity=0.045 Sum_probs=181.4
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcC---CCCCcccccccCCccccccccccCCcccccCCCCCCC-----------
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKR---PQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI----------- 238 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~---~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~----------- 238 (426)
+..+.||||+||..|+.++|++|+++..+ ..|.||+++|+..++..+.+.+++... ..|++++.
T Consensus 50 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~~~~~~~~~~~~ 127 (364)
T 3ljn_A 50 NRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAK--ERGQMPESLLNECDEREVN 127 (364)
T ss_dssp CTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHH--HHTCCHHHHHTCCCCCCEE
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhcc--ccCCCHHHHHhhcchHhhh
Confidence 34566889999999999999999888432 367889999888888554444432100 00444444
Q ss_pred ------CCCCCCcHHHHHHHcC--CHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhh
Q psy15713 239 ------KDADQRSALHIACCEG--HTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNL 309 (426)
Q Consensus 239 ------~d~~g~TpLh~Aa~~g--~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~ 309 (426)
+|..|.||||+|+..| +.++|++|+++|++++.+|..|.||||+ +..++ .+ ++++|++
T Consensus 128 ~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~---------~~----~v~~Ll~ 194 (364)
T 3ljn_A 128 EIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRN---------RE----ALDLMMD 194 (364)
T ss_dssp EETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHH
T ss_pred hhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCC---------HH----HHHHHHh
Confidence 7888999999999999 8999999999999999999999999999 88888 88 9999999
Q ss_pred hccc-----ccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCccccc
Q psy15713 310 TTEK-----DKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLF 383 (426)
Q Consensus 310 ~ga~-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~ 383 (426)
+|++ ++. .+..|.||||+|+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++++| ++
T Consensus 195 ~g~~~~~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~L-------l~ 265 (364)
T 3ljn_A 195 TVPSKSSLRLDY--ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKEL-------LQ 265 (364)
T ss_dssp HCSCSSSCCTTC--CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHH-------HH
T ss_pred cccccccccccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHH-------HH
Confidence 9888 777 88889999999999999999999999988877 456677889999999999999999 88
Q ss_pred CCCCCCC------------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy15713 384 QGADLSI------------KDADQRSALHIACCEGHTDIVKYLLLNGASV 421 (426)
Q Consensus 384 ~gad~n~------------~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~ 421 (426)
+|++++. .+..++||+++|+..|+.+.+..|++.++|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 266 KTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp HSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHH
T ss_pred cCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHH
Confidence 8776533 5668999999999999888888888776543
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=6.2e-32 Score=231.11 Aligned_cols=163 Identities=20% Similarity=0.144 Sum_probs=154.8
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
+.++||.||..|+.++|++|++. .+.+++.+|..|+||||+||..|+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~~g~t~L~~A~~~~~ 51 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDN---------------------------------TENDLNQGDDHGFSPLHWACREGR 51 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHC---------------------------------TTSCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHhc---------------------------------CcccccccCCCCCCHHHHHHHcCc
Confidence 44899999999999999999998 267899999999999999999999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|+..|
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 52 SAVVEMLIMRGARINVMNRGDDTPLHLAASHGH---------RD----IVQKLLQYKADINA--VNEHGNVPLHYACFWG 116 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--cCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 88888 99 99999999999999 9999999999999999
Q ss_pred chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15713 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414 (426)
Q Consensus 335 ~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~L 414 (426)
+.+++++| +++|++++.+|..|.||||+|+..++.+++++|
T Consensus 117 ~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L 157 (179)
T 3f6q_A 117 QDQVAEDL---------------------------------------VANGALVSICNKYGEMPVDKAKAPLRELLRERA 157 (179)
T ss_dssp CHHHHHHH---------------------------------------HHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHH
T ss_pred CHHHHHHH---------------------------------------HHCCCCcchhccCCCCcHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999999999
Q ss_pred HHCCCCCCCCC
Q psy15713 415 LLNGASVHEKD 425 (426)
Q Consensus 415 l~~Gad~~~~d 425 (426)
+++|++++..+
T Consensus 158 ~~~g~~~~~~~ 168 (179)
T 3f6q_A 158 EKMGQNLNRIP 168 (179)
T ss_dssp HHTTCCCSCBC
T ss_pred HHhhcCcccCC
Confidence 99999998754
No 49
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.3e-31 Score=225.94 Aligned_cols=160 Identities=26% Similarity=0.289 Sum_probs=148.3
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.|+||.|++.|+.++++.|++. .+.+++..+..|.||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~~g~t~L~~A~ 50 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTV---------------------------------QSVNCRDIEGRQSTPLHFAA 50 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCT---------------------------------TTTTCCCTTTTCCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHc---------------------------------CCCCccccccCCCCHHHHHH
Confidence 345667999999999999999999986 26788889999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 51 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A 115 (165)
T 3twr_A 51 GYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGH---------YE----VAELLVKHGAVVNV--ADLWKFTPLHEA 115 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTCCCHHHHH
T ss_pred HcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCc---------HH----HHHHHHhCCCCCCC--cCCCCCCHHHHH
Confidence 9999999999999999999999999999999 88888 99 99999999999998 899999999999
Q ss_pred HhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDI 410 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~i 410 (426)
+..|+.+++++| +++|++++.+|..|+||||+|+. |+.++
T Consensus 116 ~~~~~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 116 AAKGKYEICKLL---------------------------------------LQHGADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred HHcCCHHHHHHH---------------------------------------HHcCCCCcccCCCCCChhHhHhc-CChHH
Confidence 999999999999 89999999999999999999877 99999
Q ss_pred HHHHHHCCC
Q psy15713 411 VKYLLLNGA 419 (426)
Q Consensus 411 v~~Ll~~Ga 419 (426)
+++|+++||
T Consensus 156 ~~~L~~~gA 164 (165)
T 3twr_A 156 QDLLRGDAA 164 (165)
T ss_dssp HHHHHTC--
T ss_pred HHHHhhccc
Confidence 999999997
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=9.3e-33 Score=250.73 Aligned_cols=192 Identities=17% Similarity=0.140 Sum_probs=169.5
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhh----hhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCC----CCCCcH
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKG----YVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKD----ADQRSA 246 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~----~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d----~~g~Tp 246 (426)
+++++||.||+.|+.+.|+.|++ . |++++..+ ..|+||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~----------------------------------~~~~~~~~~~~~~~g~t~ 49 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTH----------------------------------KKRLTDEEFREPSTGKTC 49 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH----------------------------------TCCTTSGGGSCTTTCCCH
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhc----------------------------------CCCcchhhhhccCCCCcH
Confidence 46799999999999997666666 6 88888776 679999
Q ss_pred HHHHH---HcCCHHHHHHHHHCCCC-----------CccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc
Q psy15713 247 LHIAC---CEGHTDIVKYLLLNGAS-----------VHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT 311 (426)
Q Consensus 247 Lh~Aa---~~g~~~iv~~Ll~~ga~-----------~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g 311 (426)
||+|+ ..|+.++|++|+++|++ ++..|..|+||||+ +..++ .+ ++++|+++|
T Consensus 50 L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~---------~~----~v~~Ll~~g 116 (260)
T 3jxi_A 50 LPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRC---------KH----YVELLVEKG 116 (260)
T ss_dssp HHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTC---------HH----HHHHHHHTT
T ss_pred HHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCC---------HH----HHHHHHhCC
Confidence 99999 67999999999998754 45566699999999 88888 99 999999999
Q ss_pred ccccchhhh--------------hhhhHHHHHHHhhCchhHHHHHhh---chhhhh-hhhccCcchhHHhhcCh------
Q psy15713 312 EKDKDDLRS--------------VLFPAMLQSAVMTGDLKRMEEIKG---YVSNIV-YEFSMNPHLTTLISNLP------ 367 (426)
Q Consensus 312 a~~~~~~~~--------------~~g~t~L~~A~~~g~~~~v~~L~~---~~~~~~-~~~~~~~~l~~~~~~~~------ 367 (426)
++++. .+ ..|.||||+|+..|+.+++++|++ .+.+++ .+..+.++++.|+..+.
T Consensus 117 a~~~~--~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~ 194 (260)
T 3jxi_A 117 ADVHA--QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENT 194 (260)
T ss_dssp CCTTC--CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHH
T ss_pred CCcCc--cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHH
Confidence 99998 66 579999999999999999999999 888887 45567788888887665
Q ss_pred ---HHHHhhhccCCcccccCCCCC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy15713 368 ---QEITQKLDIDGVPSLFQGADL-------SIKDADQRSALHIACCEGHTDIVKYLLLNGASVH 422 (426)
Q Consensus 368 ---~~~~~~L~~~~~~~l~~gad~-------n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~ 422 (426)
.+++++| +++|+++ +.+|..|+||||+|+..|+.+++++|+++|+++.
T Consensus 195 ~~~~~~v~~L-------l~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 195 KFVTKMYDLL-------LIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHH-------HHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 6999999 9999999 6799999999999999999999999999987653
No 51
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=6e-31 Score=218.91 Aligned_cols=149 Identities=22% Similarity=0.236 Sum_probs=143.4
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCH
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHT 256 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~ 256 (426)
.++||.|+..|+.++|++|++. |++++ .+..|.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~-~~~~g~t~L~~A~~~~~~ 47 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN----------------------------------GAPFT-TDWLGTSPLHLAAQYGHF 47 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH----------------------------------TCCCC-CCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCC-cCCCCCCHHHHHHHcCCH
Confidence 4899999999999999999999 88887 588999999999999999
Q ss_pred HHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCc
Q psy15713 257 DIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGD 335 (426)
Q Consensus 257 ~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~ 335 (426)
+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..|+
T Consensus 48 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 48 STTEVLLRAGVSRDARTKVDRTPLHMAASEGH---------AN----IVEVLLKHGADVNA--KDMLKMTALHWATEHNH 112 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC---------HH----HHHHHHTTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCh---------HH----HHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCC
Confidence 99999999999999999999999999 88888 89 99999999999998 89999999999999999
Q ss_pred hhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15713 336 LKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414 (426)
Q Consensus 336 ~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~L 414 (426)
.+++++| +++|++++.+|..|.||||+|+.+|+.+++++|
T Consensus 113 ~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 113 QEVVELL---------------------------------------IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHH---------------------------------------HHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999 899999999999999999999999999999987
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-31 Score=251.62 Aligned_cols=188 Identities=15% Similarity=0.096 Sum_probs=152.6
Q ss_pred HHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCC-CCCCCCcHHHHHHHcCCH
Q psy15713 178 AMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI-KDADQRSALHIACCEGHT 256 (426)
Q Consensus 178 t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~-~d~~g~TpLh~Aa~~g~~ 256 (426)
+.+|.|+..+..+++++|++. |+++|. +|.+|+||||+||..|+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~----------------------------------g~dvn~~~d~~g~TpLh~Aa~~g~~ 144 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNT----------------------------------QLNLNIPVDEHGNTPLHWLTSIANL 144 (327)
T ss_dssp -----CHHHHHHHHHHHCTTS----------------------------------CCCSCSCCSTTCCCHHHHHHHTTCH
T ss_pred chhHHHHHhhHHHHHHHHHhc----------------------------------CCCcccccCCCCCcHHHHHHHcCCH
Confidence 456888888888999999988 999999 899999999999999999
Q ss_pred HHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc-ccccchhhhhhhhHHHHHHHh--
Q psy15713 257 DIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT-EKDKDDLRSVLFPAMLQSAVM-- 332 (426)
Q Consensus 257 ~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g-a~~~~~~~~~~g~t~L~~A~~-- 332 (426)
++|++|+++|++++.+|..|+||||+ +..++.. ..+ +++.|++.+ ++++. ++..|+||||+|+.
T Consensus 145 ~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~------~~~----~~~~ll~~~~~~~~~--~d~~g~tpLh~A~~~~ 212 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY------DSG----TFEALLDYLYPCLIL--EDSMNRTILHHIIITS 212 (327)
T ss_dssp HHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH------HTT----CHHHHHHHHGGGGGE--ECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc------cHH----HHHHHHHhhhccccC--CCCCCCCHHHHHHHHc
Confidence 99999999999999999999999999 6654300 035 666777766 67777 89999999999999
Q ss_pred --hCchhHHHHHhhch--------------------hhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCC
Q psy15713 333 --TGDLKRMEEIKGYV--------------------SNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLS 389 (426)
Q Consensus 333 --~g~~~~v~~L~~~~--------------------~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n 389 (426)
.|+.+++++|++.+ .+++ .+..+.++++.++. +++| +.+ ++|
T Consensus 213 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~L-------l~~--~~n 277 (327)
T 1sw6_A 213 GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWI-------IAN--MLN 277 (327)
T ss_dssp TSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHH-------HHH--TTT
T ss_pred cccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHH-------HHh--CCC
Confidence 89999999998774 3333 23445566776664 7888 777 699
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 390 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 390 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
.+|..|+||||+|+.+|+.++|++|+++|||++.+|+
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 9999999999999999999999999999999999885
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=243.71 Aligned_cols=189 Identities=19% Similarity=0.201 Sum_probs=172.2
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCC--CCCCCCCCCcHHHHHH
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGAD--LSIKDADQRSALHIAC 251 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~--~~~~d~~g~TpLh~Aa 251 (426)
....+++|.|+..|+++.++.+++. +.+ +|.+|.+|+||||+||
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~----------------------------------~~~~~~n~~d~~g~T~Lh~A~ 119 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSAR----------------------------------LLDYVVNIADSNGNTALHYSV 119 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHH----------------------------------HHHHHHTCCCTTSCCHHHHHH
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHH----------------------------------HHhhcCcCCCCCCCCHHHHHH
Confidence 3445788999999999999999988 555 8899999999999999
Q ss_pred HcCCHHHHHHHHHCCC-CCccccccCccchhc-c-----cccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhh
Q psy15713 252 CEGHTDIVKYLLLNGA-SVHEKDRVQLTVLTN-I-----RGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFP 324 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga-~~~~~d~~g~tpL~~-a-----~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~ 324 (426)
..|+.++|++|+++|+ +++..|..|.||||+ + ..++ .+ ++++|++.|++++. .+..|+
T Consensus 120 ~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~ 184 (276)
T 4hbd_A 120 SHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDD---------IE----TVLQLFRLGNINAK--ASQAGQ 184 (276)
T ss_dssp HTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHH---------HH----HHHHHHHHSCTTCC--CTTTCC
T ss_pred HCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhh---------HH----HHHHHHHcCCCccc--cCCCCC
Confidence 9999999999999998 999999999999999 6 3344 77 99999999988887 888999
Q ss_pred HHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCCccccc-CCCCCCCCCCCCCcHHHHH
Q psy15713 325 AMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLF-QGADLSIKDADQRSALHIA 402 (426)
Q Consensus 325 t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~-~gad~n~~d~~g~TpL~~A 402 (426)
||||+|+..|+.+++++|++++.+++ .+..+.++++.|+..++.+++++| ++ .|+|++.+|..|+||||+|
T Consensus 185 tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~L-------l~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 185 TALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLL-------LAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH-------HTSTTCCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH-------HhcCCCCCcCcCCCCCCHHHHH
Confidence 99999999999999999999999887 566778899999999999999999 99 8999999999999999999
Q ss_pred HHcCCHHHHHHHHHCC
Q psy15713 403 CCEGHTDIVKYLLLNG 418 (426)
Q Consensus 403 ~~~g~~~iv~~Ll~~G 418 (426)
+.+|+.+++++|++++
T Consensus 258 ~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 258 LDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTCHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHhcc
Confidence 9999999999999874
No 54
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=2e-30 Score=216.41 Aligned_cols=153 Identities=20% Similarity=0.184 Sum_probs=145.6
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
+.|+||.|+..|+.+++++|++. .+.+++..|..|.||||+ |..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~---------------------------------~~~~~~~~~~~g~t~L~~-~~~~~ 47 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR---------------------------------ELVHPDALNRFGKTALQV-MMFGS 47 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT---------------------------------TCCCTTCCCTTSCCHHHH-SCTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh---------------------------------hCcCccccCCCCCcHHHH-HHcCC
Confidence 34899999999999999999987 267899999999999999 99999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..|
T Consensus 48 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 48 TAIALELLKQGASPNVQDTSGTSPVHDAARTGF---------LD----TLKVLVEHGADVNV--PDGTGALPIHLAVQEG 112 (156)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCSCC--CCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc---------HH----HHHHHHHcCCCCCC--cCCCCCcHHHHHHHhC
Confidence 999999999999999999999999999 88888 99 99999999999998 8999999999999999
Q ss_pred chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q psy15713 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414 (426)
Q Consensus 335 ~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~L 414 (426)
+.+++++| ++. ++++.+|..|.||||+|+..|+.+++++|
T Consensus 113 ~~~~v~~L---------------------------------------l~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~L 152 (156)
T 1bd8_A 113 HTAVVSFL---------------------------------------AAE-SDLHRRDARGLTPLELALQRGAQDLVDIL 152 (156)
T ss_dssp CHHHHHHH---------------------------------------HTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHH
T ss_pred hHHHHHHH---------------------------------------Hhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 99999999 888 99999999999999999999999999999
Q ss_pred HHC
Q psy15713 415 LLN 417 (426)
Q Consensus 415 l~~ 417 (426)
+++
T Consensus 153 l~~ 155 (156)
T 1bd8_A 153 QGH 155 (156)
T ss_dssp HTT
T ss_pred Hhh
Confidence 975
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=8.1e-33 Score=246.02 Aligned_cols=183 Identities=16% Similarity=0.093 Sum_probs=161.0
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.++|++|++. |+++|.+|..|+||||+||.
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~d~~g~tpLh~A~~ 63 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKE----------------------------------MNDPSQPNEEGITALHNAIC 63 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHH----------------------------------SSCTTCCCTTSCCHHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhc----------------------------------CCCCCCCCCCCCCHHHHHHH
Confidence 34566999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh-hhhhHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS-VLFPAMLQSA 330 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~-~~g~t~L~~A 330 (426)
.|+.++|++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. .+ ..|.||||+|
T Consensus 64 ~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~---------~~----~v~~Ll~~ga~~~~--~~~~~g~tpL~~A 128 (229)
T 2vge_A 64 GANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND---------TV----ICMALVQHGAAIFA--TTLSDGATAFEKC 128 (229)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHTTTCCTTC--CCSSTTCCTGGGC
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCccc--ccCCCCCCHHHHH
Confidence 999999999999999999999999999999 88888 99 99999999999998 75 5999999999
Q ss_pred --HhhCchhHHHHHhhchhhhhhh-hccCcchhHHhhcChHHHHhhhccCCcccccCCCC--CCCCCCCCCcHHHHHHHc
Q psy15713 331 --VMTGDLKRMEEIKGYVSNIVYE-FSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGAD--LSIKDADQRSALHIACCE 405 (426)
Q Consensus 331 --~~~g~~~~v~~L~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad--~n~~d~~g~TpL~~A~~~ 405 (426)
+..|+.+++++|++++.++... .++.++++.+.... ..++| +..|++ ++.+|..|+||||+|+.+
T Consensus 129 ~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~---~~~~l-------l~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 129 DPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEF---GDELS-------FREGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp CTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSS---TTBCC-------BCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred HHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcc---ccccC-------ccccccccccccCCCcccHHHHHHHc
Confidence 9999999999999999988733 33344444433332 33677 889998 778999999999999999
Q ss_pred CCHHHHHHH
Q psy15713 406 GHTDIVKYL 414 (426)
Q Consensus 406 g~~~iv~~L 414 (426)
|+.++|+.+
T Consensus 199 g~~~~v~~~ 207 (229)
T 2vge_A 199 GQEGYVPRN 207 (229)
T ss_dssp TEEEEEEGG
T ss_pred CCcceeehh
Confidence 999888753
No 56
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-30 Score=241.95 Aligned_cols=208 Identities=15% Similarity=0.080 Sum_probs=170.7
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++++.+++... +++ ..+..+.||||+||..|+.++|++|+++
T Consensus 51 g~~~~v~~Ll~~g~-----~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------- 95 (299)
T 1s70_B 51 GDTEEVLRLLERGA-----DIN-YANVDGLTALHQACIDDNVDMVKFLVEN----------------------------- 95 (299)
T ss_dssp TCHHHHHHHHHHCC-----CTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHT-----------------------------
T ss_pred CCHHHHHHHHHcCC-----CCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHC-----------------------------
Confidence 55566666555421 111 1234567999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRL 306 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~ 306 (426)
|++++.+|..|+||||+|+..|+.++|++|+++|++++..|..|.||||+ +..++ .+ +++.
T Consensus 96 -----ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~ 157 (299)
T 1s70_B 96 -----GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM---------EE----LLQN 157 (299)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH---------HH----HHHH
T ss_pred -----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcch---------HH----HHHH
Confidence 99999999999999999999999999999999999999999999999999 77776 66 6655
Q ss_pred hhh-hcccccch------------------------hhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchh
Q psy15713 307 LNL-TTEKDKDD------------------------LRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLT 360 (426)
Q Consensus 307 Ll~-~ga~~~~~------------------------~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~ 360 (426)
++. .+.+++.. ..+..|.||||+|+..|+.+++++|++++.+++ .+..+.++++
T Consensus 158 ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~ 237 (299)
T 1s70_B 158 EVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLH 237 (299)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred HHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 443 33333220 034579999999999999999999999998887 4567788999
Q ss_pred HHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy15713 361 TLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL 416 (426)
Q Consensus 361 ~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 416 (426)
.|+..++.+++++| +++|+|++.+|..|+||||+|++.. .+.++.|++
T Consensus 238 ~A~~~~~~~~v~~L-------l~~gad~~~~d~~g~t~l~~A~~~~-~~~l~~l~~ 285 (299)
T 1s70_B 238 AAAHWGKEEACRIL-------VENLCDMEAVNKVGQTAFDVADEDI-LGYLEELQK 285 (299)
T ss_dssp HHHHTTCHHHHHHH-------HHTTCCTTCCCTTSCCTTTSCCSGG-GHHHHHHHH
T ss_pred HHHhcCCHHHHHHH-------HHcCCCCCCcCCCCCCHHHHHHHHH-HHHHHHHHH
Confidence 99999999999999 9999999999999999999997754 444444443
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=4.6e-30 Score=229.52 Aligned_cols=199 Identities=18% Similarity=0.136 Sum_probs=176.4
Q ss_pred cCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccc-cCcc
Q psy15713 200 KRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR-VQLT 278 (426)
Q Consensus 200 ~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~-~g~t 278 (426)
.+..+.+|++.|+..|+....+.+++ .|++++.++..|.||||+|+..|+.+++++|+++|++++..+. .|.|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVE------AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST 78 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBC
T ss_pred cccccchHHHHHHHcCChHHHHHHHH------cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCC
Confidence 35678999999999999655555433 4999999999999999999999999999999999999886654 4999
Q ss_pred chhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccC
Q psy15713 279 VLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMN 356 (426)
Q Consensus 279 pL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~ 356 (426)
|||+ +..++ .+ ++++|++.|++++. .+..|.||||+|+..|+.+++++|++++.++. .+..+.
T Consensus 79 ~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~ 143 (240)
T 3eu9_A 79 PLHWATRQGH---------LS----MVVQLMKYGADPSL--IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGM 143 (240)
T ss_dssp HHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hhHHHHHcCC---------HH----HHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCC
Confidence 9999 88888 89 99999999999998 89999999999999999999999999988876 344556
Q ss_pred cchhHHhh-cChHHHHhhhccCCcccccCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 357 PHLTTLIS-NLPQEITQKLDIDGVPSLFQGADLSIKDA-DQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 357 ~~l~~~~~-~~~~~~~~~L~~~~~~~l~~gad~n~~d~-~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
++++.++. ....+++++| +..|++++..+. .|.||||+|+.+|+.+++++|+++|+|++.+|+
T Consensus 144 t~l~~a~~~~~~~~~~~~L-------~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 208 (240)
T 3eu9_A 144 TPLMWAAYRTHSVDPTRLL-------LTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNI 208 (240)
T ss_dssp CHHHHHHHHCCSSTTHHHH-------HHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCT
T ss_pred cHHHHHHHhCChHHHHHHH-------HhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 67777774 4458999999 999999999997 999999999999999999999999999998874
No 58
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1e-29 Score=207.04 Aligned_cols=133 Identities=22% Similarity=0.260 Sum_probs=128.9
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc
Q psy15713 233 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT 311 (426)
Q Consensus 233 g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g 311 (426)
+++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+ +. ++ .+ ++++|+++|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~---------~~----~v~~Ll~~g 67 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GS---------AQ----VAELLLLHG 67 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SC---------HH----HHHHHHHHT
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CC---------HH----HHHHHHHCC
Confidence 67899999999999999999999999999999999999999999999999 77 88 89 999999999
Q ss_pred ccccchhhhhh-hhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCC
Q psy15713 312 EKDKDDLRSVL-FPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSI 390 (426)
Q Consensus 312 a~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~ 390 (426)
++++. ++.. |.||||+|+..|+.+++++| +++|++++.
T Consensus 68 ~~~~~--~~~~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~ 106 (136)
T 1d9s_A 68 AEPNC--ADPATLTRPVHDAAREGFLDTLVVL---------------------------------------HRAGARLDV 106 (136)
T ss_dssp CCSSC--CBTTTTBCHHHHHHHHTCHHHHHHH---------------------------------------HHTCCCCCC
T ss_pred CCCCC--cCCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCc
Confidence 99998 8988 99999999999999999999 999999999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy15713 391 KDADQRSALHIACCEGHTDIVKYLLLNGAS 420 (426)
Q Consensus 391 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad 420 (426)
+|..|+||||+|+.+|+.+++++|+++|||
T Consensus 107 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 107 CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999997
No 59
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.4e-31 Score=234.83 Aligned_cols=162 Identities=15% Similarity=0.049 Sum_probs=123.8
Q ss_pred hhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 175 LFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 254 (426)
Q Consensus 175 ~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g 254 (426)
.|.||||.|++.|+.+.++.|+++ |++++.. ..|.||||+|+..|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~----------------------------------g~~~~~~-~~~~t~L~~A~~~g 48 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAH----------------------------------GMRVKFN-PLPLALLLDSSLEG 48 (239)
T ss_dssp --------------------------------------------------------------------CHHHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhcc----------------------------------CCCcccC-chhhHHHHHHHHcC
Confidence 356999999999999999999999 9999865 78899999999999
Q ss_pred CHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhh
Q psy15713 255 HTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMT 333 (426)
Q Consensus 255 ~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~ 333 (426)
+.++|++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. +|..|+||||+|+..
T Consensus 49 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~---------~~----~v~~Ll~~ga~~~~--~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 49 EFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH---------TE----IVKFLVQFGVNVNA--ADSDGWTPLHCAASC 113 (239)
T ss_dssp CHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHHTCCTTC--CCTTCCCHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--cCCCCCCHHHHHHHc
Confidence 9999999999999999999999999999 88888 99 99999999999999 999999999999999
Q ss_pred CchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCC-cHHHHH--HHcCCHHH
Q psy15713 334 GDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQR-SALHIA--CCEGHTDI 410 (426)
Q Consensus 334 g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~-TpL~~A--~~~g~~~i 410 (426)
|+.+++++| +++|++++.++..|. ||||+| +..|+.++
T Consensus 114 ~~~~~v~~L---------------------------------------l~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 114 NNVQVCKFL---------------------------------------VESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp TCHHHHHHH---------------------------------------HHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred CCHHHHHHH---------------------------------------HHcCCCcceecCCCCcchHHHHHHhhhccHHH
Confidence 999999999 999999999998887 999999 88999999
Q ss_pred HHHHHHCCCCCCCCC
Q psy15713 411 VKYLLLNGASVHEKD 425 (426)
Q Consensus 411 v~~Ll~~Gad~~~~d 425 (426)
+++|+++|++++..|
T Consensus 155 ~~~Ll~~~a~~~~~~ 169 (239)
T 1ycs_B 155 SQFLYGVQEKMGIMN 169 (239)
T ss_dssp HHHHHHHHHHTTTTG
T ss_pred HHHHHHhhhcccccc
Confidence 999999999998764
No 60
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.5e-29 Score=213.45 Aligned_cols=140 Identities=26% Similarity=0.256 Sum_probs=126.2
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++|+.+++.. .+++ ..+..+.||||+|+..|+.+++++|++.
T Consensus 15 G~~~~v~~Ll~~G-----advn-~~d~~g~t~l~~a~~~~~~~~~~~ll~~----------------------------- 59 (169)
T 4gpm_A 15 GNKDRVKDLIENG-----ADVN-ASDSDGRTPLHHAAENGHKEVVKLLISK----------------------------- 59 (169)
T ss_dssp TCHHHHHHHHHTT-----CCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------------------------
T ss_pred CCHHHHHHHHHCC-----CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhc-----------------------------
Confidence 5666666665542 1221 2345677999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRL 306 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~ 306 (426)
|++++.+|.+|+||||+||..|+.++|++|+++|+++|.+|.+|+||||+ +..++ .+ ++++
T Consensus 60 -----gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~---------~~----~v~~ 121 (169)
T 4gpm_A 60 -----GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH---------KE----VVKL 121 (169)
T ss_dssp -----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHH
T ss_pred -----ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHH
Confidence 99999999999999999999999999999999999999999999999999 88888 99 9999
Q ss_pred hhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHH
Q psy15713 307 LNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEI 342 (426)
Q Consensus 307 Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 342 (426)
|+++|++++. ++..|+||||+|+..|+.+++++|
T Consensus 122 Ll~~gad~~~--~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 122 LISKGADVNT--SDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HHHTTCCTTC--CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCCccc--cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999 999999999999999999999999
No 61
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=4.1e-30 Score=220.58 Aligned_cols=164 Identities=15% Similarity=0.101 Sum_probs=142.0
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCC-CCCCcHHHHHHHcCC
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKD-ADQRSALHIACCEGH 255 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d-~~g~TpLh~Aa~~g~ 255 (426)
.++|+.|++.|+.+.++.++.. + ++..+ ..|+||||+|+.+|+
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~----------------------------------~--~~~~~~~~g~T~Lh~A~~~~~ 50 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEK----------------------------------G--YEDKESVLKSNILYDVLRNNN 50 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHH----------------------------------S--SSCHHHHHTTTHHHHHTTCSC
T ss_pred ccHHHHHHHcCCHHHHHHHHhc----------------------------------C--cccccccCCCCHHHHHHHcCC
Confidence 3789999999999999999988 5 34555 779999999999997
Q ss_pred H----HHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchh--HHHHHHHhhhhcccccchhhhhhhh-HHH
Q psy15713 256 T----DIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDL--VGAVVRLLNLTTEKDKDDLRSVLFP-AML 327 (426)
Q Consensus 256 ~----~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~--~~~iv~~Ll~~ga~~~~~~~~~~g~-t~L 327 (426)
. +++++|+++|+++|.+|..|+||||+ +..++ .++ ...++++|+++|++++. +|..|. |||
T Consensus 51 ~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~---------~~~~~~~~iv~~Ll~~Gadin~--~d~~g~ttpL 119 (186)
T 3t8k_A 51 DEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGG---------NDITGTTELCKIFLEKGADITA--LYKPYKIVVF 119 (186)
T ss_dssp HHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCT---------TCHHHHHHHHHHHHHTTCCSSS--CBGGGTBCTT
T ss_pred cchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC---------cchhhHHHHHHHHHHCCCCCCc--cCCCcCchHH
Confidence 5 59999999999999999999999999 66654 221 12289999999999999 999999 999
Q ss_pred HHHHhhC-----chhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCccccc-CCCCCCCCCCCCCcHHHH
Q psy15713 328 QSAVMTG-----DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLF-QGADLSIKDADQRSALHI 401 (426)
Q Consensus 328 ~~A~~~g-----~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~-~gad~n~~d~~g~TpL~~ 401 (426)
|+|+..+ +.+++++| ++ +|+|+|.+|..|+||||+
T Consensus 120 h~A~~~~~~~~~~~~iv~~L---------------------------------------l~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 120 KNIFNYFVDENEMIPLYKLI---------------------------------------FSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp GGGGGCCSCHHHHHHHHHHH---------------------------------------HTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHHHcCCChhhHHHHHHHH---------------------------------------HHhcCCCCcccCCCCCCHHHH
Confidence 9999954 34577777 88 999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 402 ACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 402 A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
|++.|+.++|++|.+...+.+.+|+
T Consensus 161 A~~~~~~~~v~~L~~~~~~~~~~~~ 185 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKKYNLKEN 185 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHHHTCCC-
T ss_pred HHHcCCHHHHHHHHHHHHHHhcccC
Confidence 9999999999999998877777764
No 62
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=8.4e-29 Score=220.59 Aligned_cols=161 Identities=18% Similarity=0.123 Sum_probs=148.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHC-CCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccc---
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLN-GASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKD--- 316 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~--- 316 (426)
.|+||||+|+..|+.+++++|++. |++++.+|..|+||||+ +..++ .+ ++++|+++|+++..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~---------~~----~v~~Ll~~~~~~~~~~~ 68 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDN---------LE----AAMVLMEAAPELVFEPM 68 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHCGGGGGCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCchhccccc
Confidence 589999999999999999999998 99999999999999999 88888 99 99999999998732
Q ss_pred hhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhh--------------ccCcchhHHhhcChHHHHhhhccCCcccc
Q psy15713 317 DLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEF--------------SMNPHLTTLISNLPQEITQKLDIDGVPSL 382 (426)
Q Consensus 317 ~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~L~~~~~~~l 382 (426)
...+..|.||||+|+..|+.+++++|++++.++.... .+.++++.|+..++.+++++| +
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l 141 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL-------I 141 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHH-------H
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHH-------H
Confidence 1167789999999999999999999999998887543 478899999999999999999 9
Q ss_pred cCCCCCCCCCCCCCcHHHHHHHcCCHHHH----HHHHHCCCCCC
Q psy15713 383 FQGADLSIKDADQRSALHIACCEGHTDIV----KYLLLNGASVH 422 (426)
Q Consensus 383 ~~gad~n~~d~~g~TpL~~A~~~g~~~iv----~~Ll~~Gad~~ 422 (426)
++|+++|.+|..|+||||+|+..|+.+++ ++|+++|++++
T Consensus 142 ~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 142 EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 99999999999999999999999999988 99999999984
No 63
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=7.7e-30 Score=239.38 Aligned_cols=178 Identities=14% Similarity=0.007 Sum_probs=145.3
Q ss_pred hhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCc
Q psy15713 166 KDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRS 245 (426)
Q Consensus 166 ~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~T 245 (426)
.+++...+..+.||||+||..|+.++|++|+++ |++++.+|.+|+|
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~----------------------------------Gad~n~~d~~g~T 166 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH----------------------------------GSNRLYGDNMGES 166 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTBCCTTCCC
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCCcCCCCCC
Confidence 333332456788999999999999999999999 9999999999999
Q ss_pred HHHHHHHcCC---HHHHHHHHHCC-CCCccccccCccchhc-cc----ccccccccccCCchhHHHHHHHhhhh------
Q psy15713 246 ALHIACCEGH---TDIVKYLLLNG-ASVHEKDRVQLTVLTN-IR----GELTSEKSTEGGYDLVGAVVRLLNLT------ 310 (426)
Q Consensus 246 pLh~Aa~~g~---~~iv~~Ll~~g-a~~~~~d~~g~tpL~~-a~----~~~~~~~~~~~~~~~~~~iv~~Ll~~------ 310 (426)
|||+|+..|+ .++++.|++.+ ++++.+|..|+||||+ +. .++ .+ ++++|++.
T Consensus 167 pLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~---------~~----~v~~Ll~~~~~~~~ 233 (327)
T 1sw6_A 167 CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC---------SA----AAKYYLDILMGWIV 233 (327)
T ss_dssp HHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTC---------HH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHcccccc---------HH----HHHHHHHHHHHHHh
Confidence 9999999999 78889999886 7899999999999999 66 566 88 88888877
Q ss_pred --------------cccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhcc
Q psy15713 311 --------------TEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDI 376 (426)
Q Consensus 311 --------------ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~ 376 (426)
|++++. ++..|.||||.|+. +++|++++.+.. +..+.+++|.|+..++.+++++|
T Consensus 234 ~~~~~~i~~~~~~~g~~~~~--~~~~g~t~L~~a~~------~~~Ll~~~~n~~-d~~G~TpLh~A~~~g~~~~v~~L-- 302 (327)
T 1sw6_A 234 KKQNRPIQSGTNEKESKPND--KNGERKDSILENLD------LKWIIANMLNAQ-DSNGDTCLNIAARLGNISIVDAL-- 302 (327)
T ss_dssp HGGGCCEEEC------------------CHHHHHCS------HHHHHHHTTTCC-CTTSCCHHHHHHHHCCHHHHHHH--
T ss_pred cccchHHHhhhhcccCCccc--ccccCCChhHHHHH------HHHHHHhCCCCC-CCCCCCHHHHHHHcCCHHHHHHH--
Confidence 777877 89999999999996 889988865444 45677889999999999999999
Q ss_pred CCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 377 DGVPSLFQGADLSIKDADQRSALHIACCEG 406 (426)
Q Consensus 377 ~~~~~l~~gad~n~~d~~g~TpL~~A~~~g 406 (426)
+++|+|++.+|..|+||||+|+++|
T Consensus 303 -----l~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 303 -----LDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -----HHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred -----HHcCCCCcccCCCCCCHHHHHHhcC
Confidence 9999999999999999999998765
No 64
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=7.2e-29 Score=207.03 Aligned_cols=137 Identities=20% Similarity=0.181 Sum_probs=120.0
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhcccccccccccccCCchhHHHHHHHhhhhccccc
Q psy15713 236 LSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDK 315 (426)
Q Consensus 236 ~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~ 315 (426)
.+..+..|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|..++ .+ ++++|+++|++++
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---------~~----~v~~Ll~~g~~~~ 71 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGS---------AR----VAELLLLHGAEPN 71 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCTTC---------HH----HHHHHHTTTCCCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHcCC---------HH----HHHHHHHcCCCCC
Confidence 3456788999999999999999999999999999999999999999965777 89 9999999999999
Q ss_pred chhhhhhhhH-HHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCC
Q psy15713 316 DDLRSVLFPA-MLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDAD 394 (426)
Q Consensus 316 ~~~~~~~g~t-~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~ 394 (426)
. ++..|.| |||+|+..|+.+++++| +++|++++.+|..
T Consensus 72 ~--~d~~g~ttpL~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~d~~ 110 (156)
T 1bi7_B 72 C--ADPATLTRPVHDAAREGFLDTLVVL---------------------------------------HRAGARLDVRDAW 110 (156)
T ss_dssp C--CCTTTCCCHHHHHHHHTCHHHHHHH---------------------------------------HHHTCCSSCCCTT
T ss_pred C--cCCCCCcHHHHHHHHCCCHHHHHHH---------------------------------------HHcCCCCcccCCC
Confidence 9 9999999 99999999999999999 8899999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 395 QRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 395 g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
|+||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 111 g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 111 GRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 99999999999999999999999999998764
No 65
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=5.8e-30 Score=228.84 Aligned_cols=201 Identities=15% Similarity=0.093 Sum_probs=169.4
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
|+.++++.+++..... +.++ ...+..+.||||+|+..|+.++|++|+++
T Consensus 19 g~~~~v~~Ll~~~~~~-~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------- 67 (236)
T 1ikn_D 19 EEKALTMEVIRQVKGD-LAFL-NFQNNLQQTPLHLAVITNQPEIAEALLGA----------------------------- 67 (236)
T ss_dssp TCSSSSSCCCC------CCCC-CCCCTTCCCHHHHHHHTTCHHHHHCCCSC-----------------------------
T ss_pred CChhHHHHHHHHhhcc-HHHh-hccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------------------------
Confidence 6667777666553210 0011 12344577999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC------CccccccCccchhc-ccccccccccccCCchhH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGAS------VHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLV 300 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~------~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~ 300 (426)
|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+ +..++ .+
T Consensus 68 -----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~-- 131 (236)
T 1ikn_D 68 -----GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY---------LG-- 131 (236)
T ss_dssp -----CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC---------HH--
T ss_pred -----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCC---------HH--
Confidence 999999999999999999999999999999999986 57788899999999 88888 89
Q ss_pred HHHHHHhhhhcccccchhhhh-hhhHHHHHHHhhCchhHHHHHhhchhhhh-hhhccCcchhHHhhcChHHHHhhhccCC
Q psy15713 301 GAVVRLLNLTTEKDKDDLRSV-LFPAMLQSAVMTGDLKRMEEIKGYVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDG 378 (426)
Q Consensus 301 ~~iv~~Ll~~ga~~~~~~~~~-~g~t~L~~A~~~g~~~~v~~L~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~ 378 (426)
++++|+++|++++. .+. .|.||||+|+..|+.+++++|++++.++. .+..+.++++.|+..++.+++++|
T Consensus 132 --~v~~Ll~~g~~~~~--~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L---- 203 (236)
T 1ikn_D 132 --IVELLVSLGADVNA--QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL---- 203 (236)
T ss_dssp --HHHHHHHHTCCTTC--CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHH----
T ss_pred --HHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHH----
Confidence 99999999999998 787 99999999999999999999999999887 456677899999999999999999
Q ss_pred cccccCCCCCC--CCCCCCCcHHHHHHHcC
Q psy15713 379 VPSLFQGADLS--IKDADQRSALHIACCEG 406 (426)
Q Consensus 379 ~~~l~~gad~n--~~d~~g~TpL~~A~~~g 406 (426)
+++|++.. .++.+|.||.+.+....
T Consensus 204 ---l~~ga~~~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 204 ---GQLTLENLQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp ---HTTSCGGGSSCCCCCTTTCCCCC----
T ss_pred ---HHcchhhhhcCCccchHHHHhhhcccc
Confidence 99999877 78889999987766543
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.95 E-value=7.7e-29 Score=226.59 Aligned_cols=208 Identities=15% Similarity=0.101 Sum_probs=156.1
Q ss_pred CCCchhHHHHhhhcc-CCh-hhHHhHHhhhhHHHHHHHHhc---CCHHHHHHHhhhhcCCCCCcccccccCCcccccccc
Q psy15713 148 GGYDLVGAVVRLLNL-TTE-KDKDDLRSVLFPAMLQSAVMT---GDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKL 222 (426)
Q Consensus 148 g~~~~v~~l~~~l~~-~~~-~~~~~~~~~~~~t~L~~Aa~~---g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~ 222 (426)
|+.++++.+++.+.. ... .+.....+..+.||||+|+.. |+.++|++|++.+.+..... .
T Consensus 24 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~---------------~ 88 (273)
T 2pnn_A 24 SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK---------------Q 88 (273)
T ss_dssp TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH---------------H
T ss_pred CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh---------------H
Confidence 667777777765321 111 011112355778999999986 99999999999922110000 0
Q ss_pred ccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccc--------------cCccchhc-ccccc
Q psy15713 223 DIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR--------------VQLTVLTN-IRGEL 287 (426)
Q Consensus 223 ~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~--------------~g~tpL~~-a~~~~ 287 (426)
.+ ...+...|..|+||||+|+..|+.++|++|+++|++++.++. .|.||||+ +..++
T Consensus 89 ~i--------~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 160 (273)
T 2pnn_A 89 FV--------NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ 160 (273)
T ss_dssp HH--------TCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTC
T ss_pred Hh--------hcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCC
Confidence 00 122334677999999999999999999999999999999997 79999999 88888
Q ss_pred cccccccCCchhHHHHHHHhhh---hcccccchhhhhhhhHHHHHHHhhCc---------hhHHHHHhhchhhhh-----
Q psy15713 288 TSEKSTEGGYDLVGAVVRLLNL---TTEKDKDDLRSVLFPAMLQSAVMTGD---------LKRMEEIKGYVSNIV----- 350 (426)
Q Consensus 288 ~~~~~~~~~~~~~~~iv~~Ll~---~ga~~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~L~~~~~~~~----- 350 (426)
.+ ++++|++ +|++++. ++..|+||||+|+..|+ .+++++|++++.+++
T Consensus 161 ---------~~----~v~~Ll~~~~~gad~~~--~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~ 225 (273)
T 2pnn_A 161 ---------LA----IVKFLLQNSWQPADISA--RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKL 225 (273)
T ss_dssp ---------HH----HHHHHHHCSSCCCCTTC--CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred ---------HH----HHHHHHhcccCCCCcee--eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccccc
Confidence 99 9999999 9999998 99999999999999998 799999999999885
Q ss_pred ---hhhccCcchhHHhhcChHHHHhhhccCCcccccCCC-CCCCCCCCCCcHHH
Q psy15713 351 ---YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGA-DLSIKDADQRSALH 400 (426)
Q Consensus 351 ---~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~ga-d~n~~d~~g~TpL~ 400 (426)
.+..+.++++.|+..++.+++++| +++|+ |+......+.+|-+
T Consensus 226 ~~~~d~~g~TpL~~A~~~g~~~iv~~L-------l~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 226 EEITNRKGLTPLALAASSGKIGVLAYI-------LQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHH-------HHHHTC--------------
T ss_pred ccccCCCCCCHHHHHHHhChHHHHHHH-------HHCCCCCchhhhhhhhhccC
Confidence 467788999999999999999999 99999 88888888777644
No 67
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=2.5e-27 Score=206.09 Aligned_cols=164 Identities=20% Similarity=0.109 Sum_probs=151.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCC-CCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchh
Q psy15713 241 ADQRSALHIACCEGHTDIVKYLLLNGA-SVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDL 318 (426)
Q Consensus 241 ~~g~TpLh~Aa~~g~~~iv~~Ll~~ga-~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 318 (426)
..+.||||.|+..|+.++++.|++.+. +++..|..|.||||+ +..++ .+ ++++|+++|++++.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~-- 67 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNND---------IE----IAKALIDRGADINL-- 67 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--
Confidence 468999999999999999999999865 999999999999999 88888 99 99999999999998
Q ss_pred hhhhhhHHHHHHHhhCchhHHHHHhh-chhhhh-hhhccCcchhHHhhcChHHHHhhhccCCcccccCC-CCCCCCCCCC
Q psy15713 319 RSVLFPAMLQSAVMTGDLKRMEEIKG-YVSNIV-YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQG-ADLSIKDADQ 395 (426)
Q Consensus 319 ~~~~g~t~L~~A~~~g~~~~v~~L~~-~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~g-ad~n~~d~~g 395 (426)
.+..|.||||+|+..|+.+++++|++ .+.++. .+..+.++++.++..++.+++++| +++| ++++.+|..|
T Consensus 68 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-------l~~g~~~~~~~~~~g 140 (201)
T 3hra_A 68 QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL-------LEDGREDIDFQNDFG 140 (201)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHH-------HHHCCCCTTCCCTTS
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHH-------HHcCCCCcCCCCCCC
Confidence 89999999999999999999999994 444554 445567899999999999999999 9999 9999999999
Q ss_pred CcHHHHHHHcCC-----HHHHHHHHHCCCCCCCCCC
Q psy15713 396 RSALHIACCEGH-----TDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 396 ~TpL~~A~~~g~-----~~iv~~Ll~~Gad~~~~d~ 426 (426)
+||||+|+..++ .+++++|+++|+|++.+|+
T Consensus 141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 141 YTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp CCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCC
Confidence 999999999998 9999999999999999874
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=8.2e-28 Score=207.81 Aligned_cols=138 Identities=21% Similarity=0.238 Sum_probs=132.2
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhccc
Q psy15713 235 DLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEK 313 (426)
Q Consensus 235 ~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 313 (426)
.+|.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~ 93 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNR---------LG----IAEKLLSKGSN 93 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHTCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCC---------HH----HHHHHHHCCCC
Confidence 356789999999999999999999999999999999999999999999 88888 89 99999999999
Q ss_pred ccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCC
Q psy15713 314 DKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDA 393 (426)
Q Consensus 314 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~ 393 (426)
++. .+..|.||||+|+..|+.+++++| +++|++++.+|.
T Consensus 94 ~~~--~~~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~ 132 (192)
T 2rfm_A 94 VNT--KDFSGKTPLMWSIIFGYSEMSYFL---------------------------------------LEHGANVNDRNL 132 (192)
T ss_dssp TTC--CCTTSCCHHHHHHHHTCHHHHHHH---------------------------------------HHTTCCSSCCCT
T ss_pred CCC--CCCCCCcHHHHHHHcCCHHHHHHH---------------------------------------HHCCCCCCCCCC
Confidence 998 899999999999999999999999 899999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 394 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 394 ~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
.|.||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 133 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 165 (192)
T 2rfm_A 133 EGETPLIVASKYGRSEIVKKLLELGADISARDL 165 (192)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 999999999999999999999999999998874
No 69
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=2.8e-28 Score=220.60 Aligned_cols=165 Identities=15% Similarity=0.137 Sum_probs=148.1
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHCCCCCcc----ccccCccchhc-ccc---cccccccccCCchhHHHHHHHhhh
Q psy15713 242 DQRSALHIACCEGHTD----IVKYLLLNGASVHE----KDRVQLTVLTN-IRG---ELTSEKSTEGGYDLVGAVVRLLNL 309 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~----iv~~Ll~~ga~~~~----~d~~g~tpL~~-a~~---~~~~~~~~~~~~~~~~~iv~~Ll~ 309 (426)
.|+||||+||..|+.+ ++++|+++|++++. +|..|+||||+ +.. ++ .+ ++++|++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~---------~~----~v~~Ll~ 67 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGV---------NA----CIMPLLQ 67 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTB---------CT----THHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccch---------HH----HHHHHHh
Confidence 4889999999999997 66788889999998 89999999999 777 77 89 9999999
Q ss_pred hcccccch---------hhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhc--------------cCcchhHHhhcC
Q psy15713 310 TTEKDKDD---------LRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFS--------------MNPHLTTLISNL 366 (426)
Q Consensus 310 ~ga~~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~--------------~~~~l~~~~~~~ 366 (426)
.|++++.. ..+..|.||||+|+..|+.+++++|++++.+++.... +.++++.|+..+
T Consensus 68 ~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~ 147 (256)
T 2etb_A 68 IDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK 147 (256)
T ss_dssp HHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred cCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC
Confidence 99987631 0346799999999999999999999999998874443 788999999999
Q ss_pred hHHHHhhhccCCccccc---CCCCCCCCCCCCCcHHHHHHH--cCCHH-------HHHHHHHCCCCC-------CCCCC
Q psy15713 367 PQEITQKLDIDGVPSLF---QGADLSIKDADQRSALHIACC--EGHTD-------IVKYLLLNGASV-------HEKDR 426 (426)
Q Consensus 367 ~~~~~~~L~~~~~~~l~---~gad~n~~d~~g~TpL~~A~~--~g~~~-------iv~~Ll~~Gad~-------~~~d~ 426 (426)
+.+++++| ++ +|+++|.+|..|+||||+|+. .++.+ ++++|+++|+|+ +.+|+
T Consensus 148 ~~~~v~~L-------l~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~ 219 (256)
T 2etb_A 148 QWDVVTYL-------LENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNH 219 (256)
T ss_dssp CHHHHHHH-------HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCT
T ss_pred CHHHHHHH-------HhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCC
Confidence 99999999 99 999999999999999999999 88988 999999999999 77764
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=7.7e-28 Score=200.77 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=118.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
...+.||||+|+..|+.++|++|+++ |++++.+|..|+||||+|+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~- 53 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA----------------------------------GANPNAPNSYGRRPIQVMM- 53 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT----------------------------------TCCTTCCCSSSCCTTTSSC-
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCCCCCCCCCHHHHHH-
Confidence 34566999999999999999999999 9999999999999999985
Q ss_pred cCCHHHHHHHHHCCCCCccccccCcc-chhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRVQLT-VLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~g~t-pL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
.|+.+++++|+++|++++.+|..|+| |||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 54 ~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~d~~g~tpl~~A 118 (156)
T 1bi7_B 54 MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF---------LD----TLVVLHRAGARLDV--RDAWGRLPVDLA 118 (156)
T ss_dssp TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC---------HH----HHHHHHHHTCCSSC--CCTTCCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC---------HH----HHHHHHHcCCCCcc--cCCCCCCHHHHH
Confidence 99999999999999999999999999 9999 88888 89 99999999999998 999999999999
Q ss_pred HhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIA 402 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A 402 (426)
+..|+.+++++| +++|++++.+|..|.||.+-+
T Consensus 119 ~~~~~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 119 EELGHRDVARYL---------------------------------------RAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHTCHHHHHHH---------------------------------------SSCC-----------------
T ss_pred HHhCHHHHHHHH---------------------------------------HHcCCCCCccCcCcCcccccC
Confidence 999999999999 999999999999999998744
No 71
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=1.1e-27 Score=203.06 Aligned_cols=126 Identities=24% Similarity=0.153 Sum_probs=118.7
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.++|++|+++ |++++.+|..|.||||+|+.
T Consensus 33 ~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 33 DERGFTPLIWASAFGEIETVRFLLEW----------------------------------GADPHILAKERESALSLAST 78 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH----------------------------------TCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc----------------------------------CCCchhhcccCCCHHHHHHH
Confidence 45677999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAV 331 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~ 331 (426)
.|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~~~~g~t~l~~A~ 143 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNH---------VK----CVEALLARGADLTT--EADSGYTPMDLAV 143 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCccc--cCCCCCCHHHHHH
Confidence 999999999999999999999999999999 88888 89 99999999999998 9999999999999
Q ss_pred hhCchhHHHHHhhchh
Q psy15713 332 MTGDLKRMEEIKGYVS 347 (426)
Q Consensus 332 ~~g~~~~v~~L~~~~~ 347 (426)
..|+.+++++|++++.
T Consensus 144 ~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 144 ALGYRKVQQVIENHIL 159 (172)
T ss_dssp HHTCHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHH
Confidence 9999999999944433
No 72
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.2e-26 Score=185.77 Aligned_cols=125 Identities=35% Similarity=0.464 Sum_probs=121.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS 320 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 320 (426)
+|+||||+|+..|+.+++++|+++|++++..|..|.||||+ +..++ .+ ++++|++.|++++. ++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~ 65 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH---------LE----VVKLLLEAGADVNA--KD 65 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCc---------HH----HHHHHHHcCCCCcc--cC
Confidence 58999999999999999999999999999999999999999 88888 89 99999999999998 89
Q ss_pred hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 321 VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 400 (426)
Q Consensus 321 ~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~ 400 (426)
..|.||||+|+..++.+++++| +++|++++.+|..|.||||
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~L---------------------------------------l~~g~~~~~~~~~g~t~l~ 106 (126)
T 1n0r_A 66 KNGRTPLHLAARNGHLEVVKLL---------------------------------------LEAGADVNAKDKNGRTPLH 106 (126)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHH---------------------------------------HHcCCCCcccCCCCCCHHH
Confidence 9999999999999999999999 8899999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCC
Q psy15713 401 IACCEGHTDIVKYLLLNGAS 420 (426)
Q Consensus 401 ~A~~~g~~~iv~~Ll~~Gad 420 (426)
+|+..|+.+++++|+++|||
T Consensus 107 ~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 107 LAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999997
No 73
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=1.2e-26 Score=195.83 Aligned_cols=131 Identities=18% Similarity=0.114 Sum_probs=126.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS 320 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 320 (426)
+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQ---------IA----VVEFLLQNGADPQL--LG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCC---------HH----HHHHHHHcCCCCCC--cC
Confidence 58999999999999999999999999999999999999999 88888 99 99999999999998 89
Q ss_pred hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 321 VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 400 (426)
Q Consensus 321 ~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~ 400 (426)
..|.||||+|+..|+.+++++| +++|++++.+|..|.||||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~L~ 107 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKML---------------------------------------LDCGVDVNEYDWNGGTPLL 107 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHH---------------------------------------HHHTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHH---------------------------------------HHCCCCCCcCCCCCCCHHH
Confidence 9999999999999999999999 8889999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 401 IACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 401 ~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
+|+..|+.+++++|+++|+|++.+|+
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~ 133 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETD 133 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999998874
No 74
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=3.9e-28 Score=230.45 Aligned_cols=207 Identities=12% Similarity=0.023 Sum_probs=148.1
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhc--------CCCCCcccccccCCccccccccccCCcccccCCCC---CCCCCCCCCc
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVK--------RPQGALPFALNSSLPQEITQKLDIDGVPSLFQGAD---LSIKDADQRS 245 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~--------~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~---~~~~d~~g~T 245 (426)
.||||+||+.|+.++|++|++.+. +..|.||||+|+..|+..+.+.++. .|++ .+..+.+ .|
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~------~gad~~~~~i~~~~-~T 165 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE------LAPTEIMAMIQAEN-YH 165 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH------SCTTTHHHHHSHHH-HH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh------CCCCccccccCCCC-CC
Confidence 377777777777777777776633 1235667777777777544444332 3765 2333333 99
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCcc--ccccCccchhc-c-cccccccccccCCchhHHHHHHHhhhhcccccchhhhh
Q psy15713 246 ALHIACCEGHTDIVKYLLLNGASVHE--KDRVQLTVLTN-I-RGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV 321 (426)
Q Consensus 246 pLh~Aa~~g~~~iv~~Ll~~ga~~~~--~d~~g~tpL~~-a-~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 321 (426)
|||+||.+|+.++|++|+++|++++. .|..|.||||+ + ..|+ .+ ++++|++.|+
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~---------~e----iv~~Ll~~ga--------- 223 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH---------HN----VINFLLDCPV--------- 223 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC---------HH----HHHHHTTSHH---------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC---------HH----HHHHHHhCCC---------
Confidence 99999999999999999999999988 89999999999 8 8888 99 9999999773
Q ss_pred hhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcCh---------------------------HHHHhhh
Q psy15713 322 LFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLP---------------------------QEITQKL 374 (426)
Q Consensus 322 ~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~---------------------------~~~~~~L 374 (426)
.|.||||+|+.+|+.+++++|++.+.+...... .+..++.+++ .+.+++|
T Consensus 224 ~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~---~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~L 300 (376)
T 2aja_A 224 MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD---AFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFL 300 (376)
T ss_dssp HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT---TTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHH
T ss_pred ccchHHHHHHHCCCHHHHHHHHhcCcccccccH---HHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHH
Confidence 388999999999999999999999887753321 2222222222 3344444
Q ss_pred cc-CCccc-ccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Q psy15713 375 DI-DGVPS-LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA 419 (426)
Q Consensus 375 ~~-~~~~~-l~~gad~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~Ga 419 (426)
.. ..++. +..|+++| .+.||||+|+..|+.++|++|+++|.
T Consensus 301 l~~~~vk~l~~~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 301 LSIPGIKALAPTATIPG----DANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HTSTTTGGGSSCCSSTT----CCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred HhChhhhhhhccCCCCC----CccHHHHHHHHcCcHHHHHHHHcChH
Confidence 11 11111 33466555 56689999999999999999998763
No 75
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=2.6e-26 Score=194.19 Aligned_cols=133 Identities=30% Similarity=0.367 Sum_probs=126.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchh
Q psy15713 240 DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDL 318 (426)
Q Consensus 240 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 318 (426)
...+.|||++||..|+.++|++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~-- 75 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGH---------LE----IVEVLLKNGADVNA-- 75 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--
Confidence 4567899999999999999999999999999999999999999 88888 99 99999999999998
Q ss_pred hhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcH
Q psy15713 319 RSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSA 398 (426)
Q Consensus 319 ~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~Tp 398 (426)
.+..|.||||+|+..|+.+++++| +++|++++.+|..|.||
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~L---------------------------------------l~~g~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVL---------------------------------------LKNGADVNANDMEGHTP 116 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCCCCCCCCH
Confidence 899999999999999999999999 89999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 399 LHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 399 L~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
||+|+..|+.+++++|+++|+|++.+|+
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 144 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNGADVNAQDK 144 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 9999999999999999999999998874
No 76
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.5e-26 Score=188.29 Aligned_cols=126 Identities=26% Similarity=0.290 Sum_probs=119.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccch
Q psy15713 239 KDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDD 317 (426)
Q Consensus 239 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~ 317 (426)
....+.||||+||..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~- 75 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH---------LE----IVEVLLKNGADVNA- 75 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC-
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc-
Confidence 44668999999999999999999999999999999999999999 88888 89 99999999999998
Q ss_pred hhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCc
Q psy15713 318 LRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRS 397 (426)
Q Consensus 318 ~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~T 397 (426)
.+..|.||||+|+..|+.+++++| +++|++++.+|..|+|
T Consensus 76 -~d~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t 115 (136)
T 2jab_A 76 -VDAIGFTPLHLAAFIGHLEIAEVL---------------------------------------LKHGADVNAQDKFGKT 115 (136)
T ss_dssp -CCTTCCCHHHHHHHHTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCC
T ss_pred -CCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCcCcCCCCCC
Confidence 899999999999999999999999 8999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCC
Q psy15713 398 ALHIACCEGHTDIVKYLLLNG 418 (426)
Q Consensus 398 pL~~A~~~g~~~iv~~Ll~~G 418 (426)
|||+|+..|+.+++++|+++|
T Consensus 116 pl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 116 AFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999987
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=6.9e-27 Score=207.66 Aligned_cols=139 Identities=18% Similarity=0.137 Sum_probs=119.3
Q ss_pred CCCCCCCC---CCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhh
Q psy15713 233 GADLSIKD---ADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLN 308 (426)
Q Consensus 233 g~~~~~~d---~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll 308 (426)
|++++..+ .+|.||||+||..|+.++|++|+++|++++.+|..|+||||+ +..++ .+ ++++|+
T Consensus 8 ~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~---------~~----~v~~Ll 74 (229)
T 2vge_A 8 AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGAN---------YS----IVDFLI 74 (229)
T ss_dssp --CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHH
T ss_pred CCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHH
Confidence 77776554 456788999999999999999999999999999999999999 88888 99 999999
Q ss_pred hhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCC
Q psy15713 309 LTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADL 388 (426)
Q Consensus 309 ~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~ 388 (426)
++|++++. ++..|.||||+|+..|+.+++++| +++|+++
T Consensus 75 ~~ga~~n~--~d~~g~tpLh~A~~~g~~~~v~~L---------------------------------------l~~ga~~ 113 (229)
T 2vge_A 75 TAGANVNS--PDSHGWTPLHCAASCNDTVICMAL---------------------------------------VQHGAAI 113 (229)
T ss_dssp HTTCCTTC--CCTTCCCHHHHHHHTTCHHHHHHH---------------------------------------HTTTCCT
T ss_pred HCCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCc
Confidence 99999999 899999999999999999999999 7777777
Q ss_pred CCCC-CCCCcHHHHH--HHcCCHHHHHHHHHCCCCCCCCC
Q psy15713 389 SIKD-ADQRSALHIA--CCEGHTDIVKYLLLNGASVHEKD 425 (426)
Q Consensus 389 n~~d-~~g~TpL~~A--~~~g~~~iv~~Ll~~Gad~~~~d 425 (426)
+.++ ..|+||||+| +..|+.+++++|+++|+|++.+|
T Consensus 114 ~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 114 FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 7765 4777777777 77777777777777777777665
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=5e-26 Score=189.05 Aligned_cols=129 Identities=26% Similarity=0.317 Sum_probs=122.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhh
Q psy15713 243 QRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV 321 (426)
Q Consensus 243 g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 321 (426)
..||||.|+..|+.+++++|+++|++++ .+..|.||||+ +..++ .+ ++++|++.|++++. .+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~ 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGH---------FS----TTEVLLRAGVSRDA--RTK 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTC---------HH----HHHHHHTTTCCTTC--CCT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--CCC
Confidence 4689999999999999999999999987 58899999999 88888 99 99999999999998 899
Q ss_pred hhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHH
Q psy15713 322 LFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHI 401 (426)
Q Consensus 322 ~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~ 401 (426)
.|.||||+|+..|+.+++++| +++|++++.+|..|+||||+
T Consensus 66 ~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~L~~ 106 (153)
T 1awc_B 66 VDRTPLHMAASEGHANIVEVL---------------------------------------LKHGADVNAKDMLKMTALHW 106 (153)
T ss_dssp TCCCHHHHHHHHTCHHHHHHH---------------------------------------HTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHH---------------------------------------HHcCCCCCCCCCCCCCHHHH
Confidence 999999999999999999999 99999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 402 ACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 402 A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
|+..|+.+++++|+++|+|++.+|+
T Consensus 107 A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 107 ATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCHHHHHHHHHcCCCccccCC
Confidence 9999999999999999999998874
No 79
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=7.1e-27 Score=190.40 Aligned_cols=134 Identities=22% Similarity=0.203 Sum_probs=120.0
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhc
Q psy15713 233 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTT 311 (426)
Q Consensus 233 g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~g 311 (426)
|+|+ .+|.+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g 66 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGH---------LK----VVELLLQHK 66 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTT
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcC
Confidence 5677 789999999999999999999999999999999999999999999 88888 89 999999999
Q ss_pred ccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCC
Q psy15713 312 EKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIK 391 (426)
Q Consensus 312 a~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~ 391 (426)
++++. ++..|.||||+|+..|+.+++++| +++|++++.+
T Consensus 67 ~~~~~--~~~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~ 105 (137)
T 3c5r_A 67 ALVNT--TGYQNDSPLHDAAKNGHVDIVKLL---------------------------------------LSYGASRNAV 105 (137)
T ss_dssp CCTTC--CCGGGCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCC
T ss_pred CcccC--cCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCC
Confidence 99998 999999999999999999999999 8899999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Q psy15713 392 DADQRSALHIACCEGHTDIVKYLLLNGASV 421 (426)
Q Consensus 392 d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~ 421 (426)
|..|.||||+|+..++.+++++|.+.+...
T Consensus 106 ~~~g~tpl~~A~~~~~~~~l~~l~~~~~s~ 135 (137)
T 3c5r_A 106 NIFGLRPVDYTDDESMKSLLLLPEKNESSS 135 (137)
T ss_dssp CTTSCCGGGGCCCHHHHHHHSCC-------
T ss_pred CCCCCCHHHHHhhccHHHHHhhccccccCC
Confidence 999999999999999999999998876543
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.93 E-value=7.1e-27 Score=211.87 Aligned_cols=197 Identities=14% Similarity=0.066 Sum_probs=156.7
Q ss_pred CCCchhHHHHhhhcc-CChhhHH-hHHhhhhHHHHHHHH---hcCCHHHHHHHhhhhcCCCCCcccccccCCcccccccc
Q psy15713 148 GGYDLVGAVVRLLNL-TTEKDKD-DLRSVLFPAMLQSAV---MTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKL 222 (426)
Q Consensus 148 g~~~~v~~l~~~l~~-~~~~~~~-~~~~~~~~t~L~~Aa---~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~ 222 (426)
|+.+.++.+++.+.. ....... ...+..+.||||+|+ +.|+.++|++|++.+.+......+
T Consensus 16 g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~-------------- 81 (260)
T 3jxi_A 16 GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF-------------- 81 (260)
T ss_dssp TCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH--------------
T ss_pred CCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh--------------
Confidence 666666666653210 1111111 112355789999999 789999999999982221111000
Q ss_pred ccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCcccc--------------ccCccchhc-ccccc
Q psy15713 223 DIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKD--------------RVQLTVLTN-IRGEL 287 (426)
Q Consensus 223 ~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d--------------~~g~tpL~~-a~~~~ 287 (426)
...+++..|..|+||||+||..|+.++|++|+++|++++.++ ..|+||||+ +..++
T Consensus 82 ---------~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~ 152 (260)
T 3jxi_A 82 ---------INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQ 152 (260)
T ss_dssp ---------HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTC
T ss_pred ---------hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCC
Confidence 034566677799999999999999999999999999999999 589999999 88888
Q ss_pred cccccccCCchhHHHHHHHhhh---hcccccchhhhhhhhHHHHHHHhhCc---------hhHHHHHhhchhhhh-----
Q psy15713 288 TSEKSTEGGYDLVGAVVRLLNL---TTEKDKDDLRSVLFPAMLQSAVMTGD---------LKRMEEIKGYVSNIV----- 350 (426)
Q Consensus 288 ~~~~~~~~~~~~~~~iv~~Ll~---~ga~~~~~~~~~~g~t~L~~A~~~g~---------~~~v~~L~~~~~~~~----- 350 (426)
.+ ++++|++ +|++++. ++..|+||||+|+..++ .+++++|++++.+++
T Consensus 153 ---------~~----~v~~Ll~~~~~ga~~~~--~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~ 217 (260)
T 3jxi_A 153 ---------PH----IVHYLTENGHKQADLRR--QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNL 217 (260)
T ss_dssp ---------HH----HHHHHHHCSSCCCCTTC--CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCG
T ss_pred ---------HH----HHHHHHhccccCCCCcc--cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccch
Confidence 99 9999999 9999998 99999999999999887 799999999999882
Q ss_pred ---hhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCC
Q psy15713 351 ---YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLS 389 (426)
Q Consensus 351 ---~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n 389 (426)
.+..+.++++.|+..++.+++++| +++|++..
T Consensus 218 ~~~~d~~g~tpL~~A~~~g~~~~v~~L-------l~~g~~~~ 252 (260)
T 3jxi_A 218 EALLNNDGLSPLMMAAKTGKIGIFQHI-------IRREIADA 252 (260)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHH-------HHHHHHHH
T ss_pred hhcccCCCCCHHHHHHHcCCHHHHHHH-------HHhCCCcc
Confidence 566778899999999999999999 99887654
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.2e-25 Score=182.82 Aligned_cols=124 Identities=21% Similarity=0.213 Sum_probs=117.6
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 253 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~ 253 (426)
..+.||||+||..|+.++|++|+++ |++++.+|..|.||||+|+..
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~~ 57 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMAN----------------------------------GADVNAKDEYGLTPLYLATAH 57 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHc----------------------------------CCCCCCcCCCCCCHHHHHHHc
Confidence 4567999999999999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHh
Q psy15713 254 GHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVM 332 (426)
Q Consensus 254 g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~ 332 (426)
|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. .+..|.||||+|+.
T Consensus 58 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~--~~~~g~tpl~~A~~ 122 (136)
T 2jab_A 58 GHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH---------LE----IAEVLLKHGADVNA--QDKFGKTAFDISIG 122 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCcC--cCCCCCCHHHHHHH
Confidence 99999999999999999999999999999 88888 89 99999999999998 89999999999999
Q ss_pred hCchhHHHHHhhch
Q psy15713 333 TGDLKRMEEIKGYV 346 (426)
Q Consensus 333 ~g~~~~v~~L~~~~ 346 (426)
.|+.+++++|+++|
T Consensus 123 ~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 123 NGNEDLAEILQKLN 136 (136)
T ss_dssp TTCHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHcC
Confidence 99999999996543
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=2.5e-26 Score=186.94 Aligned_cols=125 Identities=16% Similarity=0.151 Sum_probs=118.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.+++++|+++ |++++.+|..|+||||+|+.
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~~ 54 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEA----------------------------------GADPNALNRFGRRPIQVMMM 54 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTCCCTTCCTTTTTSTT
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHc----------------------------------CCCcCCcCCCCCCHHHHHHc
Confidence 34566999999999999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccccc-Cccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKDRV-QLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d~~-g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
|+.+++++|+++|++++.+|.. |.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 55 -~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~d~~g~tpl~~A 118 (136)
T 1d9s_A 55 -GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF---------LD----TLVVLHRAGARLDV--CDAWGRLPVDLA 118 (136)
T ss_dssp -SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTC---------HH----HHHHHHHTCCCCCC--CSSSSSCHHHHH
T ss_pred -CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--cCCCCCCHHHHH
Confidence 9999999999999999999999 9999999 88888 89 99999999999998 999999999999
Q ss_pred HhhCchhHHHHHhhchh
Q psy15713 331 VMTGDLKRMEEIKGYVS 347 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~ 347 (426)
+..++.+++++|+++|+
T Consensus 119 ~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 119 EEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHTCHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCC
Confidence 99999999999966554
No 83
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=1.5e-25 Score=187.85 Aligned_cols=130 Identities=25% Similarity=0.291 Sum_probs=122.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS 320 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 320 (426)
...||||+|+..|+.+++++|+++|++++.+|..|+||||+ +. ++ .+ ++++|+++|++++. ++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~---------~~----~v~~Ll~~g~~~~~--~~ 67 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GN---------PE----IARRLLLRGANPDL--KD 67 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SC---------HH----HHHHHHHTTCCTTC--CC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-Cc---------HH----HHHHHHHcCCCCCC--CC
Confidence 45799999999999999999999999999999999999999 55 88 89 99999999999998 89
Q ss_pred hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 321 VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 400 (426)
Q Consensus 321 ~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~ 400 (426)
..|.||||+|+..|+.+++++| +++|++++.+|..|+||||
T Consensus 68 ~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 68 RTGFAVIHDAARAGFLDTLQTL---------------------------------------LEFQADVNIEDNEGNLPLH 108 (162)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999 8999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCC-CCCCCC
Q psy15713 401 IACCEGHTDIVKYLLLNGAS-VHEKDR 426 (426)
Q Consensus 401 ~A~~~g~~~iv~~Ll~~Gad-~~~~d~ 426 (426)
+|+..|+.+++++|+++|++ ++.+|+
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 135 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRNH 135 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcCC
Confidence 99999999999999999998 577663
No 84
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.92 E-value=1e-25 Score=189.62 Aligned_cols=134 Identities=23% Similarity=0.202 Sum_probs=126.1
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccc
Q psy15713 239 KDADQRSALHIACCEGHTDIVKYLLLN-GASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKD 316 (426)
Q Consensus 239 ~d~~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 316 (426)
.|.+|.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..++ .+ ++++|+++|++++.
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~ 70 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNR---------VS----VVEYLLQHGADVHA 70 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcCh---------HH----HHHHHHhcCCCCCc
Confidence 467789999999999999999999995 77889999999999999 88888 99 99999999999998
Q ss_pred hhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCC
Q psy15713 317 DLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQR 396 (426)
Q Consensus 317 ~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~ 396 (426)
++..|.||||+|+..|+.+++++| +++|++++.+|..|+
T Consensus 71 --~~~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~ 109 (165)
T 3twr_A 71 --KDKGGLVPLHNACSYGHYEVAELL---------------------------------------VKHGAVVNVADLWKF 109 (165)
T ss_dssp --CCTTSCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTCC
T ss_pred --cCCCCCCHHHHHHHcCcHHHHHHH---------------------------------------HhCCCCCCCcCCCCC
Confidence 899999999999999999999999 899999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 397 SALHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 397 TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
||||+|+..|+.+++++|+++|+|++.+|+
T Consensus 110 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 110 TPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 999999999999999999999999999874
No 85
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.2e-26 Score=207.75 Aligned_cols=147 Identities=19% Similarity=0.141 Sum_probs=119.1
Q ss_pred CCCchhHHHHhhhccCChhhHHhHHhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCc
Q psy15713 148 GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGV 227 (426)
Q Consensus 148 g~~~~v~~l~~~l~~~~~~~~~~~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~ 227 (426)
++.+.++.+++.. .+++ .+..+.||||.|+..|+.++|++|++.
T Consensus 16 ~~~~~~~~ll~~g-----~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~----------------------------- 59 (239)
T 1ycs_B 16 NLRKTGSERIAHG-----MRVK--FNPLPLALLLDSSLEGEFDLVQRIIYE----------------------------- 59 (239)
T ss_dssp ----------------------------CHHHHHHHHHHTCHHHHHHHTST-----------------------------
T ss_pred hhHHHHHHHhccC-----CCcc--cCchhhHHHHHHHHcCCHHHHHHHHHc-----------------------------
Confidence 5666666655543 2222 124567999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHH
Q psy15713 228 PSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRL 306 (426)
Q Consensus 228 ~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~ 306 (426)
|+++|.+|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+ +..++ .+ ++++
T Consensus 60 -----g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~---------~~----~v~~ 121 (239)
T 1ycs_B 60 -----VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN---------VQ----VCKF 121 (239)
T ss_dssp -----TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHH
T ss_pred -----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC---------HH----HHHH
Confidence 99999999999999999999999999999999999999999999999999 88888 89 9999
Q ss_pred hhhhcccccchhhhhhhh-HHHHHH--HhhCchhHHHHHhhchhhhh
Q psy15713 307 LNLTTEKDKDDLRSVLFP-AMLQSA--VMTGDLKRMEEIKGYVSNIV 350 (426)
Q Consensus 307 Ll~~ga~~~~~~~~~~g~-t~L~~A--~~~g~~~~v~~L~~~~~~~~ 350 (426)
|+++|++++. .+..+. ||||+| +..|+.+++++|++++.+..
T Consensus 122 Ll~~ga~~~~--~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 122 LVESGAAVFA--MTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHTTCCTTC--CCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHcCCCcce--ecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 9999999998 777766 999999 88899999999988877665
No 86
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=2.4e-25 Score=190.03 Aligned_cols=132 Identities=21% Similarity=0.242 Sum_probs=123.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHC-CCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchh
Q psy15713 241 ADQRSALHIACCEGHTDIVKYLLLN-GASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDL 318 (426)
Q Consensus 241 ~~g~TpLh~Aa~~g~~~iv~~Ll~~-ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 318 (426)
.++.+|||.||..|+.+++++|+++ +.+++.+|..|+||||+ +..++ .+ ++++|+++|++++.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~-- 67 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGR---------SA----VVEMLIMRGARINV-- 67 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCc---------HH----HHHHHHHcCCCCCC--
Confidence 4578999999999999999999999 78899999999999999 88888 89 99999999999998
Q ss_pred hhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcH
Q psy15713 319 RSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSA 398 (426)
Q Consensus 319 ~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~Tp 398 (426)
.+..|.||||+|+..|+.+++++| +++|+++|.+|..|.||
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~d~~g~t~ 108 (179)
T 3f6q_A 68 MNRGDDTPLHLAASHGHRDIVQKL---------------------------------------LQYKADINAVNEHGNVP 108 (179)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCccCCCCCCH
Confidence 899999999999999999999999 89999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 399 LHIACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 399 L~~A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
||+|+..|+.+++++|+++|+|++.+|+
T Consensus 109 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 109 LHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 9999999999999999999999998874
No 87
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=5e-27 Score=222.87 Aligned_cols=178 Identities=10% Similarity=-0.025 Sum_probs=138.2
Q ss_pred HHHHHHHHh-cCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 177 PAMLQSAVM-TGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 177 ~t~L~~Aa~-~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
.+++++|+. .++.+++++|++. |.+ ++||||+||..|+
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~----------------------------------g~~-------~~T~Lh~Aa~~G~ 104 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKK----------------------------------GIK-------SEVICFVAAITGC 104 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHH----------------------------------TCC-------HHHHHHHHHHHCC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHc----------------------------------CCC-------cCCHHHHHHHcCC
Confidence 478888877 6889999999998 654 3489999999999
Q ss_pred HHHHHHHHHCCCCC---ccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccch-hhhhhhhHHHHHH
Q psy15713 256 TDIVKYLLLNGASV---HEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDD-LRSVLFPAMLQSA 330 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~---~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~-~~~~~g~t~L~~A 330 (426)
.++|++|+++|+.. +..+..|.||||+ +..|+ .+ ++++|+++|+++... ..+.+ .||||+|
T Consensus 105 ~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~---------~e----iv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 105 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGH---------LH----VLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTC---------HH----HHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCC---------HH----HHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 99999999888732 2445577889998 88888 88 889999888763221 12223 8899999
Q ss_pred HhhCchhHHHHHhhchhhhh---hhhccCcchhHHh-hcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 331 VMTGDLKRMEEIKGYVSNIV---YEFSMNPHLTTLI-SNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 406 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~---~~~~~~~~l~~~~-~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g 406 (426)
+..|+.+++++|+++++++. .+..+.++++.|+ ..++.+++++| ++.|++ |.||||+|+.+|
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~L-------l~~ga~-------~~taL~~Aa~~g 236 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL-------LDCPVM-------LAYAEIHEFEYG 236 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHH-------TTSHHH-------HHHHHHCTTTTT
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHH-------HhCCCc-------cchHHHHHHHCC
Confidence 99999999999988888754 3445667888888 88999999998 887743 789999999999
Q ss_pred CHHHHHHHHHCCCCCCC
Q psy15713 407 HTDIVKYLLLNGASVHE 423 (426)
Q Consensus 407 ~~~iv~~Ll~~Gad~~~ 423 (426)
+.+++++|+++|++++.
T Consensus 237 ~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 237 EKYVNPFIARHVNRLKE 253 (376)
T ss_dssp TTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCccccc
Confidence 99999999999887654
No 88
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=4.5e-25 Score=189.18 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=115.3
Q ss_pred hhhhHHHHHHHHhcCCH----HHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 173 SVLFPAMLQSAVMTGDL----KRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 248 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~----~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh 248 (426)
+..|.||||+|+..|+. +++++|+++ |+|+|.+|.+|+||||
T Consensus 35 ~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~----------------------------------Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 35 SVLKSNILYDVLRNNNDEARYKISMFLINK----------------------------------GADIKSRTKEGTTLFF 80 (186)
T ss_dssp HHHTTTHHHHHTTCSCHHHHHHHHHHHHHT----------------------------------TCCSSCCCTTCCCTHH
T ss_pred ccCCCCHHHHHHHcCCcchHHHHHHHHHHC----------------------------------CCCCCCCCCCCCcHHH
Confidence 35678999999999985 599999999 9999999999999999
Q ss_pred HHHHcCC------HHHHHHHHHCCCCCccccccCc-cchhc-ccccccccccccCCchhHHHHHHHhhh-hcccccchhh
Q psy15713 249 IACCEGH------TDIVKYLLLNGASVHEKDRVQL-TVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNL-TTEKDKDDLR 319 (426)
Q Consensus 249 ~Aa~~g~------~~iv~~Ll~~ga~~~~~d~~g~-tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~ 319 (426)
+|+..|+ .+++++|+++|+++|.+|..|+ ||||+ +..+. ...++.+ ++++|++ +|++++. +
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~----~~~~~~~----iv~~Ll~~~gad~~~--~ 150 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFV----DENEMIP----LYKLIFSQSGLQLLI--K 150 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCS----CHHHHHH----HHHHHHTSTTCCTTC--C
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCC----ChhhHHH----HHHHHHHhcCCCCcc--c
Confidence 9999987 6889999999999999999999 99999 55332 0011144 9999999 9999999 9
Q ss_pred hhhhhHHHHHHHhhCchhHHHHHhhchhh
Q psy15713 320 SVLFPAMLQSAVMTGDLKRMEEIKGYVSN 348 (426)
Q Consensus 320 ~~~g~t~L~~A~~~g~~~~v~~L~~~~~~ 348 (426)
|..|.||||+|++.|+.+++++|.++...
T Consensus 151 d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 151 DKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp CTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999766543
No 89
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.91 E-value=7.9e-25 Score=182.30 Aligned_cols=129 Identities=22% Similarity=0.245 Sum_probs=122.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHC-CCCCccccccCccchhcccccccccccccCCchhHHHHHHHhhhhcccccchhhhh
Q psy15713 243 QRSALHIACCEGHTDIVKYLLLN-GASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV 321 (426)
Q Consensus 243 g~TpLh~Aa~~g~~~iv~~Ll~~-ga~~~~~d~~g~tpL~~a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 321 (426)
+.||||+|+..|+.+++++|+++ +.+++..|..|.||||++..++ .+ ++++|+++|++++. ++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~---------~~----~v~~Ll~~g~~~~~--~~~ 66 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGS---------TA----IALELLKQGASPNV--QDT 66 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTC---------HH----HHHHHHHTTCCTTC--CCT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCC---------HH----HHHHHHHCCCCCCC--cCC
Confidence 56899999999999999999999 5599999999999999977777 88 99999999999998 899
Q ss_pred hhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHH
Q psy15713 322 LFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHI 401 (426)
Q Consensus 322 ~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~ 401 (426)
.|.||||+|+..|+.+++++| +++|++++.+|..|+||||+
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~g~~~~~~~~~g~t~L~~ 107 (156)
T 1bd8_A 67 SGTSPVHDAARTGFLDTLKVL---------------------------------------VEHGADVNVPDGTGALPIHL 107 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHH---------------------------------------HHcCCCCCCcCCCCCcHHHH
Confidence 999999999999999999999 89999999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC
Q psy15713 402 ACCEGHTDIVKYLLLNGASVHEKDR 426 (426)
Q Consensus 402 A~~~g~~~iv~~Ll~~Gad~~~~d~ 426 (426)
|+..|+.+++++|+++ +|++.+|+
T Consensus 108 A~~~~~~~~v~~Ll~~-~~~~~~~~ 131 (156)
T 1bd8_A 108 AVQEGHTAVVSFLAAE-SDLHRRDA 131 (156)
T ss_dssp HHHHTCHHHHHHHHTT-SCTTCCCT
T ss_pred HHHhChHHHHHHHHhc-cCCCCcCC
Confidence 9999999999999999 99998874
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.1e-24 Score=174.20 Aligned_cols=123 Identities=28% Similarity=0.308 Sum_probs=116.8
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
|.||||+|+..|+.+++++|+++ |++++..|..|.||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------~~~~~~~~~~g~t~L~~A~~~~~ 47 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA----------------------------------GADVNAKDKNGRTPLHLAARNGH 47 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH----------------------------------TCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHc----------------------------------CCCCCCcCCCCCcHHHHHHHcCc
Confidence 45899999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+..+
T Consensus 48 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~ 112 (126)
T 1n0r_A 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH---------LE----VVKLLLEAGADVNA--KDKNGRTPLHLAARNG 112 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh---------HH----HHHHHHHcCCCCcc--cCCCCCCHHHHHHHcC
Confidence 999999999999999999999999999 88888 89 99999999999998 8999999999999999
Q ss_pred chhHHHHHhhchh
Q psy15713 335 DLKRMEEIKGYVS 347 (426)
Q Consensus 335 ~~~~v~~L~~~~~ 347 (426)
+.+++++|+++|+
T Consensus 113 ~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 113 HLEVVKLLLEAGA 125 (126)
T ss_dssp CHHHHHHHHHHTC
T ss_pred cHHHHHHHHHcCC
Confidence 9999999955543
No 91
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=3e-25 Score=202.95 Aligned_cols=153 Identities=17% Similarity=0.068 Sum_probs=109.8
Q ss_pred HHhhhhHHHHHHHHhcCCHHHHHHHhhhhc------CCCCCcccccccCC-----ccccccccccCCcccccCCCCCCCC
Q psy15713 171 LRSVLFPAMLQSAVMTGDLKRMEEIKGYVK------RPQGALPFALNSSL-----PQEITQKLDIDGVPSLFQGADLSIK 239 (426)
Q Consensus 171 ~~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~------~~~g~~~l~~a~~~-----~~~~~~~~~~~~~~~l~~g~~~~~~ 239 (426)
..+..+.||||+||..|+.++|++|++.+. +..|.||+++|+.. +.....+.+ +..|.+++..
T Consensus 106 ~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~L------l~~g~~~~~~ 179 (276)
T 4hbd_A 106 IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQL------FRLGNINAKA 179 (276)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHH------HHHSCTTCCC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHH------HHcCCCcccc
Confidence 345667899999999999999999999833 44577777777632 222222222 2336677777
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhh-hcccccch
Q psy15713 240 DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNL-TTEKDKDD 317 (426)
Q Consensus 240 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~ 317 (426)
|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+ +..++ .+ ++++|++ .|++++.
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~---------~~----iv~~Ll~~~gad~~~- 245 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGH---------KE----IAGLLLAVPSCDISL- 245 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHTSTTCCTTC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC---------HH----HHHHHHhcCCCCCcC-
Confidence 7777777777777777777777777777777777777777777 66666 67 7777777 6777777
Q ss_pred hhhhhhhHHHHHHHhhCchhHHHHHhh
Q psy15713 318 LRSVLFPAMLQSAVMTGDLKRMEEIKG 344 (426)
Q Consensus 318 ~~~~~g~t~L~~A~~~g~~~~v~~L~~ 344 (426)
++..|.||||+|+..|+.+++++|++
T Consensus 246 -~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 246 -TDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp -CCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred -cCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 77777777777777777777777744
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=1e-24 Score=195.75 Aligned_cols=141 Identities=18% Similarity=0.103 Sum_probs=127.8
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 253 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~ 253 (426)
..+.||||+|+..|+.++|++|++ |+++|.+|..|+||||+||..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------------------~~~~~~~d~~g~t~L~~A~~~ 87 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-----------------------------------DRDVDAVDENGRTALLFVAGL 87 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-----------------------------------TCCTTCBCTTSCBHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-----------------------------------CCCCCCcCCCCCCHHHHHHHC
Confidence 456799999999999999999976 568999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCcccc-ccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHH
Q psy15713 254 GHTDIVKYLLLNGASVHEKD-RVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAV 331 (426)
Q Consensus 254 g~~~iv~~Ll~~ga~~~~~d-~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~ 331 (426)
|+.++|++|+++|++++.++ ..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+
T Consensus 88 g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~---------~~----~v~~Ll~~ga~~~~--~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 88 GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR---------PE----VVEALVELGADIEV--EDERGLTALELAR 152 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHCCCCCCC--CCCCCCcHHHHHH
Confidence 99999999999999999998 889999999 88888 99 99999999999998 9999999999998
Q ss_pred hhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy15713 332 MTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIV 411 (426)
Q Consensus 332 ~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~iv 411 (426)
..+ ....+.||||+|+..|+.+++
T Consensus 153 ~~~--------------------------------------------------------~~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 153 EIL--------------------------------------------------------KTTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp HHH--------------------------------------------------------TTCCCSSHHHHHHHHHHHHHH
T ss_pred HHH--------------------------------------------------------hccCCCCHHHHHHHcChHHHH
Confidence 622 124678999999999999999
Q ss_pred HHHHHCCCC
Q psy15713 412 KYLLLNGAS 420 (426)
Q Consensus 412 ~~Ll~~Gad 420 (426)
++|++++.+
T Consensus 177 ~~L~~~~~~ 185 (244)
T 3ui2_A 177 NVLEGQVFE 185 (244)
T ss_dssp HHHHHHHEE
T ss_pred HHHHHhccc
Confidence 999987543
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.4e-24 Score=183.61 Aligned_cols=139 Identities=17% Similarity=0.106 Sum_probs=126.1
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACC 252 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~ 252 (426)
+..+.||||+|+..|+.+++++|++ |+++|.+|..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-----------------------------------~~~~~~~d~~g~t~L~~A~~ 85 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-----------------------------------DRDVDAVDENGRTALLFVAG 85 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-----------------------------------TSCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-----------------------------------cCCCCCcCCCCCCHHHHHHH
Confidence 3466799999999999999999986 46889999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCcccc-ccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 253 EGHTDIVKYLLLNGASVHEKD-RVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 253 ~g~~~iv~~Ll~~ga~~~~~d-~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
.|+.+++++|+++|++++.+| ..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 86 ~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~d~~g~tpl~~A 150 (183)
T 3deo_A 86 LGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR---------PE----VVEALVELGADIEV--EDERGLTALELA 150 (183)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC---------HH----HHHHHHHHTCCTTC--CCTTSCCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc---------HH----HHHHHHHcCCCCcC--CCCCCCCHHHHH
Confidence 999999999999999999998 899999999 88888 89 99999999999998 999999999999
Q ss_pred HhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHH
Q psy15713 331 VMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDI 410 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~~~i 410 (426)
+..++. ..+.|||++|+..|+.++
T Consensus 151 ~~~~~~--------------------------------------------------------~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 151 REILKT--------------------------------------------------------TPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp HHHHHT--------------------------------------------------------CCCCSHHHHHHHHHHHHH
T ss_pred HHhccC--------------------------------------------------------cccccHHHHHHHcCHHHH
Confidence 975431 245789999999999999
Q ss_pred HHHHHHC
Q psy15713 411 VKYLLLN 417 (426)
Q Consensus 411 v~~Ll~~ 417 (426)
+++|.++
T Consensus 175 ~~~L~~~ 181 (183)
T 3deo_A 175 INVLEGQ 181 (183)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9999875
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=3.8e-25 Score=195.61 Aligned_cols=134 Identities=19% Similarity=0.180 Sum_probs=116.2
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhh-ccccc
Q psy15713 238 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLT-TEKDK 315 (426)
Q Consensus 238 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~ 315 (426)
..+..|.||||+||..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|++. |++++
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~~g~~~~ 134 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGH---------KD----IVEMLFTQPNIELN 134 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHTTSTTCCCC
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC---------HH----HHHHHHcCCCCCcc
Confidence 346778999999999999999999999999999999999999999 88888 89 99999998 99999
Q ss_pred chhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCC
Q psy15713 316 DDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQ 395 (426)
Q Consensus 316 ~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g 395 (426)
. ++..|.||||+|+..|+.+++++| +++|++++.+|..|
T Consensus 135 ~--~d~~g~tpL~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~~~~g 173 (222)
T 3ehr_A 135 Q--QNKLGDTALHAAAWKGYADIVQLL---------------------------------------LAKGARTDLRNIEK 173 (222)
T ss_dssp C--CCTTSCCHHHHHHHHTCHHHHHHH---------------------------------------HHHTCCSCCCCTTS
T ss_pred c--cCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCccccCCC
Confidence 9 999999999999999999999999 88999999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q psy15713 396 RSALHIACCEGHTDIVKYLLLNGASVHEKD 425 (426)
Q Consensus 396 ~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~d 425 (426)
.||||+|+..|+.++++.|+++|++.+.+|
T Consensus 174 ~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 174 KLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp CCHHHHCCSHHHHHHHC-------------
T ss_pred CCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 999999999999999999999999988765
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.1e-24 Score=201.31 Aligned_cols=138 Identities=20% Similarity=0.113 Sum_probs=121.7
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCC------CCCCCCcHHHHH
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSI------KDADQRSALHIA 250 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~------~d~~g~TpLh~A 250 (426)
.++|+.|+..|+.+.|+.|++. |++++. .+..|+||||+|
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~----------------------------------g~d~~~~~~~~~~~~~g~t~Lh~A 197 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN----------------------------------GQDFGQPLPGPDAQAPEELVLHLA 197 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTSCEECSSSCSCEECHHHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhc----------------------------------CCcccccCCCcccCCCCccHHHHH
Confidence 4689999999999999999999 999998 689999999999
Q ss_pred HHc---CCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHH
Q psy15713 251 CCE---GHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAM 326 (426)
Q Consensus 251 a~~---g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~ 326 (426)
+.. |+.+++++|+++|+++|.+|..|+||||+ +..++ .+ ++++|+++|++++. +|..|.||
T Consensus 198 ~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~---------~~----~v~~Ll~~gad~~~--~d~~G~Tp 262 (301)
T 2b0o_E 198 VKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQ---------PD----CLKLLLKGRALVGT--VNEAGETA 262 (301)
T ss_dssp HHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCCSC--CCTTSCCH
T ss_pred HHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--cCCCCCCH
Confidence 997 89999999999999999999999999999 88888 99 99999999999998 99999999
Q ss_pred HHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcC
Q psy15713 327 LQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 406 (426)
Q Consensus 327 L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g 406 (426)
||+|+..|+.+++++| +++|++ .|.||||+|+.+|
T Consensus 263 L~~A~~~~~~~iv~~L---------------------------------------l~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 263 LDIARKKHHKECEELL---------------------------------------EQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHHTCHHHHHHH---------------------------------------HHHHHH------TTSSCCC------
T ss_pred HHHHHHcCCHHHHHHH---------------------------------------HHhcCC------CCCChhHHHHhcC
Confidence 9999999999999999 555655 5789999999988
Q ss_pred CH
Q psy15713 407 HT 408 (426)
Q Consensus 407 ~~ 408 (426)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 64
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=3.5e-24 Score=170.93 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=107.8
Q ss_pred hhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHc
Q psy15713 174 VLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCE 253 (426)
Q Consensus 174 ~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~ 253 (426)
..+.||||+|+..|+.+++++|++. |++++.+|..|+||||+||..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~----------------------------------~~~~~~~~~~g~t~L~~A~~~ 50 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAK----------------------------------GEDVNRTLEGGRKPLHYAADC 50 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTSCCTTSSCHHHHHHHT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc----------------------------------CCCcCccCCCCCcHHHHHHHc
Confidence 3466999999999999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHh
Q psy15713 254 GHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVM 332 (426)
Q Consensus 254 g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~ 332 (426)
|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|+.
T Consensus 51 ~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 51 GQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH---------VS----CVKLLLSKGADKTV--KGPDGLTAFEATDN 115 (123)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHHCCC
T ss_pred CCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--cCCCCCCHHHHhCC
Confidence 99999999999999999999999999999 88888 89 99999999999998 99999999999966
Q ss_pred hCchhHH
Q psy15713 333 TGDLKRM 339 (426)
Q Consensus 333 ~g~~~~v 339 (426)
.+..+++
T Consensus 116 ~~~~~ll 122 (123)
T 3aaa_C 116 QAIKALL 122 (123)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555443
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=9e-25 Score=177.87 Aligned_cols=125 Identities=20% Similarity=0.198 Sum_probs=116.5
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~ 51 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN----------------------------------GSDPNVKDHAGWTPLHEAC 51 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCSCCCCTTSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCcCCCCCCCHHHHHH
Confidence 445677999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA 330 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A 330 (426)
..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..|.||||+|
T Consensus 52 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~~~~g~tpl~~A 116 (137)
T 3c5r_A 52 NHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH---------VD----IVKLLLSYGASRNA--VNIFGLRPVDYT 116 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCGGGGC
T ss_pred HcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--CCCCCCCHHHHH
Confidence 9999999999999999999999999999999 88888 89 99999999999998 999999999999
Q ss_pred HhhCchhHHHHHhhc
Q psy15713 331 VMTGDLKRMEEIKGY 345 (426)
Q Consensus 331 ~~~g~~~~v~~L~~~ 345 (426)
+..+..+++++|.+.
T Consensus 117 ~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 117 DDESMKSLLLLPEKN 131 (137)
T ss_dssp CCHHHHHHHSCC---
T ss_pred hhccHHHHHhhcccc
Confidence 999999999888443
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=3e-24 Score=171.35 Aligned_cols=116 Identities=19% Similarity=0.148 Sum_probs=106.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchh
Q psy15713 240 DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDL 318 (426)
Q Consensus 240 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 318 (426)
+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++++.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~---------~~----~v~~Ll~~g~~~~~-- 68 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQ---------LE----ILEFLLLKGADINA-- 68 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTC---------HH----HHHHHHTTTCCTTC--
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--
Confidence 4578899999999999999999999999999999999999999 88888 89 99999999999998
Q ss_pred hhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcH
Q psy15713 319 RSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSA 398 (426)
Q Consensus 319 ~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~Tp 398 (426)
++..|+||||+|+..|+.+++++| +++|++++.+|..|+||
T Consensus 69 ~d~~g~tpL~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~~~~g~t~ 109 (123)
T 3aaa_C 69 PDKHHITPLLSAVYEGHVSCVKLL---------------------------------------LSKGADKTVKGPDGLTA 109 (123)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCcCCCCCCH
Confidence 999999999999999999999999 89999999999999999
Q ss_pred HHHHHHcCCHH
Q psy15713 399 LHIACCEGHTD 409 (426)
Q Consensus 399 L~~A~~~g~~~ 409 (426)
||+|...+..+
T Consensus 110 l~~A~~~~~~~ 120 (123)
T 3aaa_C 110 FEATDNQAIKA 120 (123)
T ss_dssp HHHCCCHHHHH
T ss_pred HHHhCCHHHHH
Confidence 99995444333
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=4.8e-24 Score=188.53 Aligned_cols=125 Identities=20% Similarity=0.238 Sum_probs=115.0
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+||..|+.++|++|++. |++++.+|..|+||||+||
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~~~~~~~~g~t~L~~A~ 114 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDN----------------------------------RVGVNGLDKAGSTALYWAC 114 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhC----------------------------------CCCccccCCCCCCHHHHHH
Confidence 345667999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHC-CCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHH
Q psy15713 252 CEGHTDIVKYLLLN-GASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQS 329 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~-ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~ 329 (426)
..|+.++|++|+++ |++++.+|..|+||||+ +..++ .+ ++++|+++|++++. ++..|.||||+
T Consensus 115 ~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~---------~~----~v~~Ll~~ga~~~~--~~~~g~t~l~~ 179 (222)
T 3ehr_A 115 HGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGY---------AD----IVQLLLAKGARTDL--RNIEKKLAFDM 179 (222)
T ss_dssp HTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHHTCCSCC--CCTTSCCHHHH
T ss_pred HcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCcc--ccCCCCCHHHH
Confidence 99999999999999 99999999999999999 88888 99 99999999999998 99999999999
Q ss_pred HHhhCchhHHHHHhhc
Q psy15713 330 AVMTGDLKRMEEIKGY 345 (426)
Q Consensus 330 A~~~g~~~~v~~L~~~ 345 (426)
|+..++.++++.|++.
T Consensus 180 A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 180 ATNAACASLLKKKQGT 195 (222)
T ss_dssp CCSHHHHHHHC-----
T ss_pred hcchhHHHHHHHHhcc
Confidence 9999999999999433
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=7e-26 Score=194.11 Aligned_cols=125 Identities=19% Similarity=0.059 Sum_probs=115.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchh
Q psy15713 240 DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDL 318 (426)
Q Consensus 240 d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~ 318 (426)
+.+|.||||+|+..|+.+++++|++ |++++.+|..|+||||+ +..++ .+ ++++|+++|++++.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~---------~~----~v~~Ll~~ga~~~~-- 104 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGS---------DK----CVRLLAEAGADLDH-- 104 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCc--
Confidence 5678999999999999999999999 99999999999999999 88888 89 99999999999988
Q ss_pred hh-hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCc
Q psy15713 319 RS-VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRS 397 (426)
Q Consensus 319 ~~-~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~T 397 (426)
.+ ..|+||||+|+..|+.+++++| +++|++++.+|..|+|
T Consensus 105 ~~~~~g~tpL~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~d~~g~t 145 (183)
T 3deo_A 105 RDMRGGLTALHMAAGYVRPEVVEAL---------------------------------------VELGADIEVEDERGLT 145 (183)
T ss_dssp CCSSSSCCHHHHHHHTTCHHHHHHH---------------------------------------HHHTCCTTCCCTTSCC
T ss_pred CCCCCCCCHHHHHHhcCcHHHHHHH---------------------------------------HHcCCCCcCCCCCCCC
Confidence 77 8899999999999999999999 8899999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCC
Q psy15713 398 ALHIACCEGHTDIVKYLLLNGA 419 (426)
Q Consensus 398 pL~~A~~~g~~~iv~~Ll~~Ga 419 (426)
|||+|++.++.+.++.+++.++
T Consensus 146 pl~~A~~~~~~~~~~~~l~~a~ 167 (183)
T 3deo_A 146 ALELAREILKTTPKGNPMQFGR 167 (183)
T ss_dssp HHHHHHHHHHTCCCCSHHHHHH
T ss_pred HHHHHHHhccCcccccHHHHHH
Confidence 9999999877766666665544
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=7.1e-23 Score=193.59 Aligned_cols=165 Identities=19% Similarity=0.087 Sum_probs=116.9
Q ss_pred hhhHHHHHHHHhc-CCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCC--CCCCcHHHHH
Q psy15713 174 VLFPAMLQSAVMT-GDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKD--ADQRSALHIA 250 (426)
Q Consensus 174 ~~~~t~L~~Aa~~-g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d--~~g~TpLh~A 250 (426)
....|+||.|+.. |++++|+.|+++ |+++|..+ ..|.||||+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~----------------------------------Gadvn~~~~~~~g~TpLh~A 242 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAH----------------------------------GADVNWVNGGQDNATPLIQA 242 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHT----------------------------------TCCTTCCCTTTTCCCHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHc----------------------------------CCCCCccccccCCCCHHHHH
Confidence 3455899999999 999999999999 99999998 8999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHH
Q psy15713 251 CCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQS 329 (426)
Q Consensus 251 a~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~ 329 (426)
+..|+.++|++|+++|+++|.+|..|+||||+ +..++ .+ ++++|+++|++++. .|..|.||||+
T Consensus 243 a~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~---------~~----~v~~LL~~Gad~~~--~d~~G~TpL~~ 307 (368)
T 3jue_A 243 TAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGH---------TG----LACLFLKRGADLGA--RDSEGRDPLTI 307 (368)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHHHHTTCCTTC--CCTTSCCHHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCc---------HH----HHHHHHHCcCCCCC--cCCCCCCHHHH
Confidence 99999999999999999999999999999999 88888 89 99999999999998 99999999999
Q ss_pred HHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC--
Q psy15713 330 AVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH-- 407 (426)
Q Consensus 330 A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~-- 407 (426)
|+..++.+++++|+..+. .+.+....+..+.|+++++.....
T Consensus 308 A~~~g~~~iv~lLl~~~~------------------------------------~~~~~~~~~~~~~t~l~i~~~~~~~~ 351 (368)
T 3jue_A 308 AMETANADIVTLLRLAKM------------------------------------REAEAAQGQAGDETYLDIFRDFSLMA 351 (368)
T ss_dssp HHHTTCHHHHHHHHHHHC--------------------------------------------------------------
T ss_pred HHHCCCHHHHHHHHHcCC------------------------------------CcccccccCCCCCCHHHHHHHHHhhc
Confidence 999999999999954431 233444456677788887776553
Q ss_pred HHHHHHHHHCCCCCCC
Q psy15713 408 TDIVKYLLLNGASVHE 423 (426)
Q Consensus 408 ~~iv~~Ll~~Gad~~~ 423 (426)
.+-.+.|..++.+++.
T Consensus 352 ~~~~ekl~r~~~~~~t 367 (368)
T 3jue_A 352 SDDPEKLSRRSHDLHT 367 (368)
T ss_dssp ----------------
T ss_pred CCCHHHHHhcCCCcCc
Confidence 3445666677766653
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.6e-23 Score=187.78 Aligned_cols=192 Identities=15% Similarity=0.057 Sum_probs=144.0
Q ss_pred hhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCccccccc--CCccccccccccCCcccccCCCCCCCCCCCCCcHHHHH
Q psy15713 173 SVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNS--SLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIA 250 (426)
Q Consensus 173 ~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~--~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~A 250 (426)
+.++++.|+.+...|+..+.+++...........|-.... .....+..+..... .....+..+....++|+.|
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~-----f~~~~~~~~~~~l~~l~~a 137 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERR-----YARKKHADTAAKLHSLCEA 137 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCT-----TSCCCSSSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhh-----cccccccccchhhhhhhhH
Confidence 3456688999999999888777655422211111111100 00111111111000 0111222223346899999
Q ss_pred HHcCCHHHHHHHHHCCCCCc------cccccCccchhc-ccc---cccccccccCCchhHHHHHHHhhhhcccccchhhh
Q psy15713 251 CCEGHTDIVKYLLLNGASVH------EKDRVQLTVLTN-IRG---ELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS 320 (426)
Q Consensus 251 a~~g~~~iv~~Ll~~ga~~~------~~d~~g~tpL~~-a~~---~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~ 320 (426)
+..|+.+.++.|++.|++++ ..|..|+||||+ +.. ++ .+ ++++|+++|++++. +|
T Consensus 138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~---------~~----~v~~Ll~~ga~in~--~d 202 (278)
T 1dcq_A 138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS---------LH----IVDFLVQNSGNLDK--QT 202 (278)
T ss_dssp HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTT---------HH----HHHHHHHHCSCTTC--CC
T ss_pred hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccch---------HH----HHHHHHHCCCCccc--cC
Confidence 99999999999999999954 458899999999 776 66 88 99999999999999 99
Q ss_pred hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHH
Q psy15713 321 VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALH 400 (426)
Q Consensus 321 ~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~ 400 (426)
..|.||||+|+..|+.+++++| +++|+|++.+|..|.||||
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~L---------------------------------------l~~gad~~~~d~~g~tpL~ 243 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLL---------------------------------------LRGKASIEIANESGETPLD 243 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCccCCCCCHHH
Confidence 9999999999999999999999 9999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCC
Q psy15713 401 IACCEGHTDIVKYLLLNGASVHE 423 (426)
Q Consensus 401 ~A~~~g~~~iv~~Ll~~Gad~~~ 423 (426)
+|+..|+.+++++|+++|++...
T Consensus 244 ~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 244 IAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999999999999997543
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.9e-22 Score=199.64 Aligned_cols=127 Identities=16% Similarity=0.089 Sum_probs=116.3
Q ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCccc------cccCccchhc-cc---ccccccccccCCchhHHHHHHHhhhhccc
Q psy15713 244 RSALHIACCEGHTDIVKYLLLNGASVHEK------DRVQLTVLTN-IR---GELTSEKSTEGGYDLVGAVVRLLNLTTEK 313 (426)
Q Consensus 244 ~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~------d~~g~tpL~~-a~---~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 313 (426)
.+.||.|+..|+.++|+.|+++|+++|.. |..|+||||+ +. .++ .+ ++++|+++|++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~---------~~----~v~~Ll~~ga~ 199 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS---------LP----LVDFIIQNGGH 199 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTT---------HH----HHHHHHHHSCC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhccccc---------HH----HHHHHHHcCCC
Confidence 47899999999999999999999999988 8899999999 44 455 88 99999999999
Q ss_pred ccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCC
Q psy15713 314 DKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDA 393 (426)
Q Consensus 314 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~ 393 (426)
++. +|..|+||||+|+..|+.+++++| +++|+|+|.+|.
T Consensus 200 vn~--~d~~g~TpLh~A~~~g~~~~v~~L---------------------------------------l~~ga~~~~~d~ 238 (497)
T 3lvq_E 200 LDA--KAADGNTALHYAALYNQPDCLKLL---------------------------------------LKGRALVGTVNE 238 (497)
T ss_dssp TTC--CCSSSCCHHHHHTTTTCHHHHHHH---------------------------------------HHTCCCCSCCCT
T ss_pred CCc--cCCCCCcHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCcCC
Confidence 999 999999999999999999999999 999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCC
Q psy15713 394 DQRSALHIACCEGHTDIVKYLLLNGASVHEK 424 (426)
Q Consensus 394 ~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~~~ 424 (426)
.|+||||+|+..|+.+++++|+++|||++..
T Consensus 239 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 239 AGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999864
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=2.3e-22 Score=199.14 Aligned_cols=117 Identities=20% Similarity=0.141 Sum_probs=112.4
Q ss_pred HHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCC------CCCCCcHHHHHH
Q psy15713 178 AMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIK------DADQRSALHIAC 251 (426)
Q Consensus 178 t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~------d~~g~TpLh~Aa 251 (426)
+.||.|+..|+.+.|+.|++. |+++|.. |..|+||||+||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~----------------------------------g~~~n~~~~~~~~~~~g~t~Lh~A~ 179 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFAN----------------------------------GQDFGQPLPGPDAQAPEELVLHLAV 179 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT----------------------------------TCCSSSCBCCSSSCCSCBCHHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhh----------------------------------cccccCCCCCcccccccchHHHHHH
Confidence 679999999999999999999 9999988 889999999997
Q ss_pred H---cCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHH
Q psy15713 252 C---EGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAML 327 (426)
Q Consensus 252 ~---~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L 327 (426)
. .|+.++|++|+++|+++|.+|..|+||||+ +..++ .+ ++++|+++|++++. +|..|.|||
T Consensus 180 ~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~---------~~----~v~~Ll~~ga~~~~--~d~~g~tpl 244 (497)
T 3lvq_E 180 KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQ---------PD----CLKLLLKGRALVGT--VNEAGETAL 244 (497)
T ss_dssp HTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTC---------HH----HHHHHHHTCCCCSC--CCTTCCCHH
T ss_pred HhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--cCCCCCCHH
Confidence 6 899999999999999999999999999999 88888 99 99999999999999 999999999
Q ss_pred HHHHhhCchhHHHHHh
Q psy15713 328 QSAVMTGDLKRMEEIK 343 (426)
Q Consensus 328 ~~A~~~g~~~~v~~L~ 343 (426)
|+|+..|+.+++++|+
T Consensus 245 ~~A~~~~~~~~~~~Ll 260 (497)
T 3lvq_E 245 DIARKKHHKECEELLE 260 (497)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHH
Confidence 9999999999999993
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=5.3e-22 Score=149.89 Aligned_cols=93 Identities=40% Similarity=0.584 Sum_probs=78.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhcccccccccccccCCchhHHHHHHHhhhhcccccchhhhh
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSV 321 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~ 321 (426)
+|+||||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~----------------------------------------------- 33 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK----------------------------------------------- 33 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------------------------------------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC-----------------------------------------------
Confidence 488999999999999999999999988876554
Q ss_pred hhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHH
Q psy15713 322 LFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHI 401 (426)
Q Consensus 322 ~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~ 401 (426)
.|.||||+|+..|+.+++++| +++|++++.+|..|+||||+
T Consensus 34 ~g~t~L~~A~~~~~~~~v~~L---------------------------------------l~~ga~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 34 NGRTPLHLAARNGHLEVVKLL---------------------------------------LEAGADVNAKDKNGRTPLHL 74 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCccCCCCCCHHHH
Confidence 455666777777777888888 78888899999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCC
Q psy15713 402 ACCEGHTDIVKYLLLNGAS 420 (426)
Q Consensus 402 A~~~g~~~iv~~Ll~~Gad 420 (426)
|+..|+.+++++|+++|||
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999986
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=3.2e-22 Score=184.85 Aligned_cols=127 Identities=16% Similarity=0.095 Sum_probs=118.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCcc------ccccCccchhc-ccc---cccccccccCCchhHHHHHHHhhhhc
Q psy15713 242 DQRSALHIACCEGHTDIVKYLLLNGASVHE------KDRVQLTVLTN-IRG---ELTSEKSTEGGYDLVGAVVRLLNLTT 311 (426)
Q Consensus 242 ~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~------~d~~g~tpL~~-a~~---~~~~~~~~~~~~~~~~~iv~~Ll~~g 311 (426)
...++|+.|+..|+.+.++.|++.|++++. .+..|.||||+ +.. ++ .+ ++++|+++|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~---------~~----iv~~Ll~~g 216 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQAS---------LP----LVDFIIQNG 216 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTT---------HH----HHHHHHHHS
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCc---------HH----HHHHHHhcC
Confidence 356789999999999999999999999998 69999999999 654 56 88 999999999
Q ss_pred ccccchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCC
Q psy15713 312 EKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIK 391 (426)
Q Consensus 312 a~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~ 391 (426)
++++. +|..|.||||+|+..|+.+++++| +++|+|++.+
T Consensus 217 advn~--~d~~G~TpLh~A~~~g~~~~v~~L---------------------------------------l~~gad~~~~ 255 (301)
T 2b0o_E 217 GHLDA--KAADGNTALHYAALYNQPDCLKLL---------------------------------------LKGRALVGTV 255 (301)
T ss_dssp SCTTC--CCTTCCCHHHHHHHTTCHHHHHHH---------------------------------------HHTTCCCSCC
T ss_pred CCCCC--CCCCCCCHHHHHHHcCCHHHHHHH---------------------------------------HHcCCCCCCc
Confidence 99999 899999999999999999999999 9999999999
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC
Q psy15713 392 DADQRSALHIACCEGHTDIVKYLLLNGASVH 422 (426)
Q Consensus 392 d~~g~TpL~~A~~~g~~~iv~~Ll~~Gad~~ 422 (426)
|..|.||||+|+..|+.+++++|+++|++..
T Consensus 256 d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g 286 (301)
T 2b0o_E 256 NEAGETALDIARKKHHKECEELLEQAQAGTF 286 (301)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999998753
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=7.3e-23 Score=183.62 Aligned_cols=142 Identities=18% Similarity=0.047 Sum_probs=121.0
Q ss_pred CCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchh
Q psy15713 202 PQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLT 281 (426)
Q Consensus 202 ~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~ 281 (426)
..+.+++.+++..++......... .+. ..+.+|.||||+||..|+.++|++|++ |+++|.+|..|+||||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~------~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~ 82 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSY------IAA---DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALL 82 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGG------SCH---HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHH
T ss_pred CCCccHHHHHHHcCCCcccccccc------ccc---ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 356677777777776444333211 122 233578999999999999999999999 9999999999999999
Q ss_pred c-ccccccccccccCCchhHHHHHHHhhhhcccccchhhh-hhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcch
Q psy15713 282 N-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRS-VLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHL 359 (426)
Q Consensus 282 ~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~-~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l 359 (426)
+ +..++ .+ ++++|+++|++++. ++ ..|.||||+|+..|+.+++++|
T Consensus 83 ~A~~~g~---------~~----~v~~Ll~~ga~~~~--~~~~~g~t~L~~A~~~g~~~~v~~L----------------- 130 (244)
T 3ui2_A 83 FVAGLGS---------DK----CVRLLAEAGADLDH--RDMRGGLTALHMAAGYVRPEVVEAL----------------- 130 (244)
T ss_dssp HHHHHTC---------HH----HHHHHHHTTCCTTC--CCSSSCCCHHHHHHHTTCHHHHHHH-----------------
T ss_pred HHHHCCC---------HH----HHHHHHHcCCCCCc--CCCCCCCCHHHHHHHcCCHHHHHHH-----------------
Confidence 9 88888 99 99999999999988 77 7899999999999999999999
Q ss_pred hHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 360 TTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 407 (426)
Q Consensus 360 ~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~TpL~~A~~~g~ 407 (426)
+++|++++.+|..|+||||+|+..++
T Consensus 131 ----------------------l~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 131 ----------------------VELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp ----------------------HHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred ----------------------HHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 99999999999999999999997543
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=6.5e-22 Score=186.97 Aligned_cols=128 Identities=21% Similarity=0.156 Sum_probs=119.3
Q ss_pred CCCCCCcHHHHHHHc-CCHHHHHHHHHCCCCCcccc--ccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccc
Q psy15713 239 KDADQRSALHIACCE-GHTDIVKYLLLNGASVHEKD--RVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKD 314 (426)
Q Consensus 239 ~d~~g~TpLh~Aa~~-g~~~iv~~Ll~~ga~~~~~d--~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 314 (426)
.+..+.||||+|+.. |+.+++++|+++|+++|..+ ..|.||||+ +..++ .+ ++++|+++|+++
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~---------~~----iv~~LL~~Gadv 261 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANS---------LL----ACEFLLQNGANV 261 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCT
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCC---------HH----HHHHHHHcCCCC
Confidence 345677999999999 99999999999999999998 899999999 88888 89 999999999999
Q ss_pred cchhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCC
Q psy15713 315 KDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDAD 394 (426)
Q Consensus 315 ~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~ 394 (426)
+. .|..|.||||+|+..|+.+++++| +++|++++.+|..
T Consensus 262 n~--~d~~G~TpLh~A~~~g~~~~v~~L---------------------------------------L~~Gad~~~~d~~ 300 (368)
T 3jue_A 262 NQ--ADSAGRGPLHHATILGHTGLACLF---------------------------------------LKRGADLGARDSE 300 (368)
T ss_dssp TC--CCTTSCCHHHHHHHHTCHHHHHHH---------------------------------------HHTTCCTTCCCTT
T ss_pred CC--CCCCCCCHHHHHHHcCcHHHHHHH---------------------------------------HHCcCCCCCcCCC
Confidence 98 999999999999999999999999 9999999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC
Q psy15713 395 QRSALHIACCEGHTDIVKYLLLNGAS 420 (426)
Q Consensus 395 g~TpL~~A~~~g~~~iv~~Ll~~Gad 420 (426)
|.||||+|+..|+.+++++|+++|..
T Consensus 301 G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 301 GRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999987643
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=1.6e-21 Score=147.28 Aligned_cols=91 Identities=34% Similarity=0.412 Sum_probs=87.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCC
Q psy15713 176 FPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGH 255 (426)
Q Consensus 176 ~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~ 255 (426)
|.||||+|+..|+.+++++|++. |+++|.+|..|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~----------------------------------g~~~n~~d~~g~t~L~~A~~~~~ 47 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA----------------------------------GADVNAKDKNGRTPLHLAARNGH 47 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCcccCCCCCCHHHHHHHcCC
Confidence 45899999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhccc
Q psy15713 256 TDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEK 313 (426)
Q Consensus 256 ~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 313 (426)
.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|+++|++
T Consensus 48 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~---------~~----~~~~Ll~~ga~ 93 (93)
T 1n0q_A 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH---------LE----VVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCC
Confidence 999999999999999999999999999 88888 89 99999999974
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=4.1e-21 Score=175.37 Aligned_cols=122 Identities=20% Similarity=0.114 Sum_probs=113.7
Q ss_pred HHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCC------CCCCCCCCCcHHHHH
Q psy15713 177 PAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGAD------LSIKDADQRSALHIA 250 (426)
Q Consensus 177 ~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~------~~~~d~~g~TpLh~A 250 (426)
.++|+.|+..|+.+.++.+++. |++ ++..|..|+||||+|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~----------------------------------g~~~~~~~~l~~~~~~g~t~Lh~A 176 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD----------------------------------GVDLTEKIPLANGHEPDETALHLA 176 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----------------------------------TCCTTSBCCCSSCSSTTCBHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHh----------------------------------hcchhhhccccccccCCCCcchHH
Confidence 3799999999999999999999 777 445588999999999
Q ss_pred HHc---CCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHH
Q psy15713 251 CCE---GHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAM 326 (426)
Q Consensus 251 a~~---g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~ 326 (426)
+.. |+.+++++|+++|+++|.+|..|+||||+ +..++ .+ ++++|+++|++++. +|..|.||
T Consensus 177 ~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~---------~~----~v~~Ll~~gad~~~--~d~~g~tp 241 (278)
T 1dcq_A 177 VRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN---------AE----CLKLLLRGKASIEI--ANESGETP 241 (278)
T ss_dssp HHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCCTTC--CCTTSCCH
T ss_pred HHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCCCCC--ccCCCCCH
Confidence 999 89999999999999999999999999999 88888 99 99999999999999 99999999
Q ss_pred HHHHHhhCchhHHHHHhhchh
Q psy15713 327 LQSAVMTGDLKRMEEIKGYVS 347 (426)
Q Consensus 327 L~~A~~~g~~~~v~~L~~~~~ 347 (426)
||+|+..|+.+++++|++++.
T Consensus 242 L~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 242 LDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999976655
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2.4e-21 Score=152.37 Aligned_cols=108 Identities=23% Similarity=0.199 Sum_probs=100.5
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccc
Q psy15713 238 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKD 316 (426)
Q Consensus 238 ~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 316 (426)
.+|.+|+||||+||..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~---------~~----~~~~Ll~~g~~~~~ 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGH---------AE----IVKLLLAKGADVNA 70 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTC---------HH----HHHHHTTTTCCTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc---------HH----HHHHHHHcCCCCcc
Confidence 468899999999999999999999999999999999999999999 88888 89 99999999999998
Q ss_pred hhhhhhhhHHHHHHHhhCchhHHHHHhhchhhhhhhhccCcchhHHhhcChHHHHhhhccCCcccccCCCCCCCCCCCCC
Q psy15713 317 DLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQR 396 (426)
Q Consensus 317 ~~~~~~g~t~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~~~~~~~l~~gad~n~~d~~g~ 396 (426)
++..|.||||+|+..++.+++++| +++|+++|.++..|.
T Consensus 71 --~d~~g~tpl~~A~~~~~~~~~~~L---------------------------------------l~~ga~~n~~~~~~~ 109 (115)
T 2l6b_A 71 --RSKDGNTPEHLAKKNGHHEIVKLL---------------------------------------DAKGADVNARSWGSS 109 (115)
T ss_dssp --CCTTCCCTTHHHHTTTCHHHHHHH---------------------------------------HTTSSSHHHHSCCCC
T ss_pred --cCCCCCCHHHHHHHCCCHHHHHHH---------------------------------------HHcCCCCCcCCcccc
Confidence 899999999999999999999999 889999999999998
Q ss_pred cHH
Q psy15713 397 SAL 399 (426)
Q Consensus 397 TpL 399 (426)
||-
T Consensus 110 ~~~ 112 (115)
T 2l6b_A 110 HHH 112 (115)
T ss_dssp ---
T ss_pred ccc
Confidence 873
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=4.6e-21 Score=150.77 Aligned_cols=106 Identities=25% Similarity=0.300 Sum_probs=98.3
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~----------------------------------g~~~~~~d~~g~t~L~~A~ 50 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK----------------------------------GADVNARSKDGNTPLHLAA 50 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT----------------------------------TCCSSCCCSSSCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCCcCCCCCCHHHHHH
Confidence 345677999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHH
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAM 326 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~ 326 (426)
..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++++. ++..+.+|
T Consensus 51 ~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~---------~~----~~~~Ll~~ga~~n~--~~~~~~~~ 111 (115)
T 2l6b_A 51 KNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH---------HE----IVKLLDAKGADVNA--RSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC---------HH----HHHHHHTTSSSHHH--HSCCCC--
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC---------HH----HHHHHHHcCCCCCc--CCcccccc
Confidence 9999999999999999999999999999999 88888 89 99999999999998 88888776
No 113
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=99.75 E-value=3.8e-18 Score=158.13 Aligned_cols=102 Identities=43% Similarity=0.734 Sum_probs=92.3
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcch-hHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~-~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
++|||||+||+||+|. +++++++|+++.++||+||.+|||..|.|. +.|++++.|.++|++++.|||+|++.+
T Consensus 254 ~~GiVle~~G~Gn~p~-~~~~~~~l~~a~~~Gi~VV~~Src~~G~v~~~~Y~~g~~l~~~GvI~~~dlt~ekAr~----- 327 (358)
T 2him_A 254 VKALILRSYGVGNAPQ-NKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLT----- 327 (358)
T ss_dssp CSEEEEEEBTTTBCCC-CHHHHHHHHHHHHTTCEEEEEESSSBCCCCCC-----CHHHHTTCEECTTCCHHHHHH-----
T ss_pred CCEEEEecCCCCCCCC-cHHHHHHHHHHHHCCCEEEEEcCCCCCCCCccchhhhhHHhhCCEEECCCCCHHHHHH-----
Confidence 4899999999999995 689999999999999999999999999998 899999999999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcccccccccc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLTNIRGELTS 142 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~~~ 142 (426)
+|+|+|+++ .+.++++++|.++++||++.
T Consensus 328 ---------------------------------kL~~~L~~~-~~~~~i~~~f~~~l~gE~~~ 356 (358)
T 2him_A 328 ---------------------------------KLHYLLSQE-LDTETIRKAMSQNLRGELTP 356 (358)
T ss_dssp ---------------------------------HHHHHHHSS-CCHHHHHHHHTSCSSSSSCC
T ss_pred ---------------------------------HHHHHHhCC-CCHHHHHHHHHhhccCCcCC
Confidence 999999997 89999999999999999874
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=6e-18 Score=131.72 Aligned_cols=89 Identities=28% Similarity=0.379 Sum_probs=82.5
Q ss_pred HhhhhHHHHHHHHhcCCHHHHHHHhhhhcCCCCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHH
Q psy15713 172 RSVLFPAMLQSAVMTGDLKRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIAC 251 (426)
Q Consensus 172 ~~~~~~t~L~~Aa~~g~~~~v~~Ll~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa 251 (426)
.+..+.|+||+|+..|+.+++++|++. |++++.+|..|+||||+||
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~----------------------------------g~~i~~~d~~g~tpLh~A~ 65 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN----------------------------------GADVAAKDKNGSTPLHLAA 65 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT----------------------------------TCCTTCCCTTCCCHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc----------------------------------CCCCCccCCCCCCHHHHHH
Confidence 345677999999999999999999999 9999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHh
Q psy15713 252 CEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLL 307 (426)
Q Consensus 252 ~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~L 307 (426)
..|+.+++++|+++|++++.+|..|+||||+ +..++ .+ ++++|
T Consensus 66 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~---------~~----~~~~L 109 (110)
T 2zgd_A 66 RNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN---------ED----LAEIL 109 (110)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC---------HH----HHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC---------HH----HHHHh
Confidence 9999999999999999999999999999999 88888 88 88776
No 115
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=99.73 E-value=9.4e-18 Score=154.02 Aligned_cols=102 Identities=35% Similarity=0.575 Sum_probs=96.5
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcch-hHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~-~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
.+|+|||+||+||+|..+++++++|+++.++ +++|.+|||..|.|. +.|++++.|.++|++++.|||+|.+.+
T Consensus 224 ~~GiVle~~G~Gn~p~~~~~~~~~l~~a~~~-i~VV~~Sqc~~G~v~~~~Y~~g~~l~~~Gvi~~~dlt~ekAr~----- 297 (328)
T 1wls_A 224 YKGIILEGYGVGGIPYRGTDLFEVVSSISKR-IPVVLTTQAIYDGVDLQRYKVGRIALEAGVIPAGDMTKEATIT----- 297 (328)
T ss_dssp CSEEEEEESSSCCCCCSSSSHHHHHHHHTTT-SCEEEEESSSBSCCCTTTBHHHHHHHHTTCEECTTCCHHHHHH-----
T ss_pred CCEEEEeeeCCCCCCCCcHHHHHHHHHHhcC-CeEEEecCCCCCccCCccchhhhHHhhCCEEECCCCCHHHHHH-----
Confidence 4899999999999995457999999999999 999999999999998 899999999999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcccccccccc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLTNIRGELTS 142 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~~~ 142 (426)
+|+|+|+++ .+.++++++|.++++||++.
T Consensus 298 ---------------------------------kL~~~L~~~-~~~~~i~~~f~~~l~gE~~~ 326 (328)
T 1wls_A 298 ---------------------------------KLMWILGHT-KNIEEVKQLMGKNITGELTR 326 (328)
T ss_dssp ---------------------------------HHHHHTTTC-CCHHHHHHHHTSCSSSSSCC
T ss_pred ---------------------------------HHHHHHcCC-CCHHHHHHHHHhhccCCccc
Confidence 999999997 89999999999999999874
No 116
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=99.72 E-value=1.7e-17 Score=156.67 Aligned_cols=101 Identities=39% Similarity=0.649 Sum_probs=96.5
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcch-hHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~-~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
++|||||+||+||+| ++++++|+++.++|+++|.+|||..|.|. +.|++++.|.++|++++.|||+|++.+
T Consensus 329 ~~GiVleg~G~Gn~p---~~~~~~l~~a~~~Gi~VV~~Sqc~~G~V~~~~Y~~g~~l~~~GvI~~~dltpekAri----- 400 (438)
T 1zq1_A 329 YKGIVIEGTGLGHTP---NDIIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLPETAYV----- 400 (438)
T ss_dssp CSEEEEEEBTTTBCC---GGGHHHHHHHHHTTCEEEEEESSSBSCCCCSSSHHHHHHHHTTCEECTTCCHHHHHH-----
T ss_pred CCEEEEeeECCCCCC---HHHHHHHHHHHHCCCEEEEeCCCCCCccCcccchhhhHHhhCCEEECCCCCHHHHHH-----
Confidence 489999999999999 59999999999999999999999999998 899999999999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhccccccccccc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLTNIRGELTSE 143 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~~~~ 143 (426)
+|+|+|+++ .+.++++++|.++++||++..
T Consensus 401 ---------------------------------kLm~~L~~~-~~~~ei~~~f~~~l~GE~t~~ 430 (438)
T 1zq1_A 401 ---------------------------------KLMWVLGHT-QNLEEVRKMMLTNYAGEITPY 430 (438)
T ss_dssp ---------------------------------HHHHHHTTC-CCHHHHHHHHHSCSSTTSCSS
T ss_pred ---------------------------------HHHHHHhCC-CCHHHHHHHHHhhccCccccc
Confidence 999999997 899999999999999999854
No 117
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=99.71 E-value=1.8e-17 Score=156.24 Aligned_cols=101 Identities=34% Similarity=0.598 Sum_probs=96.5
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcch-hHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~-~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
++|||||+||+||+| ++++++|+++.++|+++|.+|||..|.|. +.|++++.|.++|++++.|||+|.+.+
T Consensus 326 ~~GiVleg~G~Gn~p---~~~~~~l~~a~~~Gi~VV~~Sqc~~G~V~~~~Y~~g~~l~~~GvI~~~dltpekAri----- 397 (435)
T 2d6f_A 326 YRGIVIEGTGLGHCP---DTLIPVIGEAHDMGVPVAMTSQCLNGRVNMNVYSTGRRLLQAGVIPCDDMLPEVAYV----- 397 (435)
T ss_dssp CSEEEEEEBTTTBCC---GGGHHHHHHHHHTTCCEEEEETTCBSCCCTTSSHHHHHHHHTTCEECTTCCHHHHHH-----
T ss_pred CCEEEEecCCCCCcC---HHHHHHHHHHHhCCCEEEEeCCCCCCccCcccchhhhHHhhCCEEECCCCCHHHHHH-----
Confidence 489999999999999 59999999999999999999999999998 899999999999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhccccccccccc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLTNIRGELTSE 143 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~~~~ 143 (426)
+|+|+|+++ .+.++++++|.++++||++..
T Consensus 398 ---------------------------------kLm~~L~~~-~~~~ei~~~f~~~l~GE~t~~ 427 (435)
T 2d6f_A 398 ---------------------------------KMCWVLGQT-DDPEMAREMMRENIAGEINER 427 (435)
T ss_dssp ---------------------------------HHHHHTTTC-CCHHHHHHHHHSCSSSCCCSS
T ss_pred ---------------------------------HHHHHHhCC-CCHHHHHHHHHhhccCccccc
Confidence 999999997 899999999999999999854
No 118
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=6.2e-18 Score=131.62 Aligned_cols=93 Identities=25% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCccccccCccchhc-ccccccccccccCCchhHHHHHHHhhhhccc
Q psy15713 235 DLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTN-IRGELTSEKSTEGGYDLVGAVVRLLNLTTEK 313 (426)
Q Consensus 235 ~~~~~d~~g~TpLh~Aa~~g~~~iv~~Ll~~ga~~~~~d~~g~tpL~~-a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~ 313 (426)
.+...|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+ +..++ .+ ++++|+++|++
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~---------~~----~v~~Ll~~ga~ 82 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGH---------LE----VVKLLLEAGAD 82 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC---------HH----HHHHHHHTTCC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC---------HH----HHHHHHHcCCC
Confidence 455678899999999999999999999999999999999999999999 88888 89 99999999999
Q ss_pred ccchhhhhhhhHHHHHHHhhCchhHHHHH
Q psy15713 314 DKDDLRSVLFPAMLQSAVMTGDLKRMEEI 342 (426)
Q Consensus 314 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 342 (426)
++. ++..|.||||+|+..|+.+++++|
T Consensus 83 ~~~--~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 VXA--QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTC--CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccc--cccCCCcHHHHHHHcCCHHHHHHh
Confidence 998 899999999999999999999987
No 119
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=99.59 E-value=1.9e-15 Score=138.70 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=83.0
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccC-CCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQC-SRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~-~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
.+|+|||+||+||+|. +++++|+++.++|+++|.+||| ..|.|...|+.+ +.+.|++++.|||+|.+.+
T Consensus 246 ~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Sr~~~~G~v~~~y~~~--~~~~Gvi~~~dlt~ekAri----- 315 (337)
T 4pga_A 246 AKALIHAGTGNGSVSS---RVVPALQQLRKNGTQIIRSSHVNQGGFVLRNAEQP--DDKNDWVVAHDLNPEKARI----- 315 (337)
T ss_dssp CSEEEEEEBTTTBCCT---TTHHHHHHHHHTTCEEEEEESCCSBCCCCTTTSSC--HHHHTCEECTTCCHHHHHH-----
T ss_pred CCEEEEEEeCCCCCCH---HHHHHHHHHHHCCCEEEEeccCCCCCccCcccccc--cccCCEEECCCCCHHHHHH-----
Confidence 4899999999999996 8999999999999999999999 899998778765 5789999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 316 ---------------------------------kL~~~L~~~-~~~~ei~~~f~~ 336 (337)
T 4pga_A 316 ---------------------------------LAMVAMTKT-QDSKELQRIFWE 336 (337)
T ss_dssp ---------------------------------HHHHHTTTC-CCHHHHHHHHHH
T ss_pred ---------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998864
No 120
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=99.58 E-value=2.9e-15 Score=137.57 Aligned_cols=90 Identities=19% Similarity=0.358 Sum_probs=83.1
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHh
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVL 80 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~ 80 (426)
.+|+|||+||+||+| ++++++|+++.++|+++|.+|||..|.|.. .+++.|.++|++++.|||+|.+.+
T Consensus 236 ~~GiVl~~~G~Gn~p---~~~~~~l~~a~~~gi~VV~~Sr~~~G~v~~--~~g~~l~~~Gvi~~~dlt~ekAr~------ 304 (326)
T 1nns_A 236 YDGIVSAGVGNGNLY---KSVFDTLATAAKTGTAVVRSSRVPTGATTQ--DAEVDDAKYGFVASGTLNPQKARV------ 304 (326)
T ss_dssp CSEEEEEEBTTTBCC---HHHHHHHHHHHHTTCEEEEEESSSSSCBCS--SSSSCHHHHTEEECBTCCHHHHHH------
T ss_pred CCEEEEeeECCCCCC---HHHHHHHHHHHHCCCEEEEECCCCCCCcCC--ChhhHHhcCCEEECCCCCHHHHHH------
Confidence 489999999999999 599999999999999999999999999963 278889999999999999999999
Q ss_pred cCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 81 SKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 305 --------------------------------kL~~~L~~~-~~~~~i~~~f~~ 325 (326)
T 1nns_A 305 --------------------------------LLQLALTQT-KDPQQIQQIFNQ 325 (326)
T ss_dssp --------------------------------HHHHHTTTC-CCHHHHHHHHTT
T ss_pred --------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998864
No 121
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=99.58 E-value=3.2e-15 Score=137.51 Aligned_cols=90 Identities=24% Similarity=0.335 Sum_probs=82.9
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHh
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVL 80 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~ 80 (426)
.+|+|||+||+||+| ++++++|+++.++|+++|.+|||..|.|.. .+++.|.+.|++++.|||+|.+.+
T Consensus 240 ~~GiVle~~G~Gn~p---~~~~~~l~~a~~~gi~VV~~Sr~~~G~v~~--~~g~~l~~~Gvi~~~dlt~ekAr~------ 308 (330)
T 1wsa_A 240 AKGIIHAGMGNGNPF---PLTQNALEKAAKSGVVVARSSRVGSGSTTQ--EAEVDDKKLGFVATESLNPQKARV------ 308 (330)
T ss_dssp CSEEEEEEBTTTBCC---HHHHHHHHHHHHTTCEEEEEESSSSSCBCS--SSSSCHHHHTEEECBSCCHHHHHH------
T ss_pred CCEEEEeeECCCCCC---HHHHHHHHHHHHCCCEEEEECCCCCCCcCc--chhhHHhcCCEEECCCCCHHHHHH------
Confidence 489999999999999 599999999999999999999999999972 278889999999999999999999
Q ss_pred cCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 81 SKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 309 --------------------------------kL~~~L~~~-~~~~~i~~~f~~ 329 (330)
T 1wsa_A 309 --------------------------------LLMLALTKT-SDREAIQKIFST 329 (330)
T ss_dssp --------------------------------HHHHHHTTC-CCHHHHHHHHTT
T ss_pred --------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998864
No 122
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=99.57 E-value=5.7e-15 Score=135.87 Aligned_cols=90 Identities=19% Similarity=0.335 Sum_probs=82.8
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhh-hCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHH
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSAN-ERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYV 79 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~-~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~ 79 (426)
.+|+|||+||+||+|. +++++|+++. ++||++|.+|||..|.|.. .+++.|.++|++++.|||+|.+.+
T Consensus 240 ~~GiVle~~G~Gn~p~---~~~~~l~~a~~~~gi~VV~~Sr~~~G~v~~--~~g~~l~~~Gvi~~~dlt~ekAr~----- 309 (331)
T 1agx_A 240 VKAIIHAGTGNGSMAN---YLVPEVRKLHDEQGLQIVRSSRVAQGFVLR--NAEQPDDKYGWIAAHDLNPQKARL----- 309 (331)
T ss_dssp CSEEEEEEBTTTBCCT---THHHHHHHHHHTTCCEEEEEESSCSSCBCT--TTSSCHHHHTCEECBTCCHHHHHH-----
T ss_pred CCEEEEeeECCCCCCH---HHHHHHHHHHHcCCCEEEEECCCCCCCcCc--chhhHHhhCCEEECCCCCHHHHHH-----
Confidence 4899999999999994 9999999999 9999999999999999972 278889999999999999999999
Q ss_pred hcCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 80 LSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 80 ~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 310 ---------------------------------kL~~~L~~~-~~~~~i~~~f~~ 330 (331)
T 1agx_A 310 ---------------------------------LMALALTKT-NDAKEIQNMFWN 330 (331)
T ss_dssp ---------------------------------HHHHHTTTC-CCHHHHHHHHTT
T ss_pred ---------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998864
No 123
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=99.56 E-value=6.6e-15 Score=134.82 Aligned_cols=88 Identities=23% Similarity=0.379 Sum_probs=80.4
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHh
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVL 80 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~ 80 (426)
++|+|||+||+||+|. +++++|+++.++|+++|.+|||..|.|. .+..+.+.|++++.|||+|.+.+
T Consensus 246 ~~GiVle~~G~Gn~p~---~~~~~l~~a~~~Gi~VV~~Src~~G~V~----~~~~l~~~Gvi~~~dlt~ekAri------ 312 (334)
T 3nxk_A 246 TKGIVVAGSGAGSIHK---NQKDVLKELLKKGLKVVVSSRVVAGCVA----VSDSDEKLGFISAEDLNPQKARV------ 312 (334)
T ss_dssp CCEEEEEEBTTTBCCH---HHHHHHHHHHTTTCEEEEEESSSBSCCC----CCHHHHHHTEEECTTCCHHHHHH------
T ss_pred CCEEEEeeECCCCCcH---HHHHHHHHHHHCCCEEEEeCCCCCCccC----cccccccCCEEECCCCCHHHHHH------
Confidence 4899999999999994 9999999999999999999999999994 24567899999999999999999
Q ss_pred cCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 81 SKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 313 --------------------------------kL~~~L~~~-~~~~~i~~~f~~ 333 (334)
T 3nxk_A 313 --------------------------------LLMLALTKT-SDPKKIQEYFLK 333 (334)
T ss_dssp --------------------------------HHHHHTTTC-CCHHHHHHHHHH
T ss_pred --------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998864
No 124
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=99.55 E-value=7.1e-15 Score=135.30 Aligned_cols=89 Identities=26% Similarity=0.395 Sum_probs=81.0
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHh
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVL 80 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~ 80 (426)
.+|+|||+||+||+| ++++++|+++.++||++|.+|||..|.|... +..|.+.|++++.|||+|.+.+
T Consensus 243 ~~GiVle~~G~Gn~p---~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~~~---g~~l~~~Gvi~~~dlt~ekAr~------ 310 (332)
T 2wlt_A 243 AKGVVIAGVGNGNVS---AGFLKAMQEASQMGVVIVRSSRVGSGGVTSG---EIDDKAYGFITSDNLNPQKARV------ 310 (332)
T ss_dssp CSEEEEEEBTTTBCC---HHHHHHHHHHHHTTCEEEEEESSSSSCCCSS---SSCHHHHTCEECTTCCHHHHHH------
T ss_pred CCEEEEeeECCCCCC---HHHHHHHHHHHHCCCEEEEECCCCCCCcCcc---hhhhhcCCEEECCCCCHHHHHH------
Confidence 489999999999999 5999999999999999999999999999743 3389999999999999999999
Q ss_pred cCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 81 SKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 311 --------------------------------kL~~~L~~~-~~~~~i~~~f~~ 331 (332)
T 2wlt_A 311 --------------------------------LLQLALTKT-NDKAKIQEMFEE 331 (332)
T ss_dssp --------------------------------HHHHHHHHC-CCHHHHHHHHHH
T ss_pred --------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999987 889999988853
No 125
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=99.42 E-value=2.3e-13 Score=125.02 Aligned_cols=85 Identities=18% Similarity=0.330 Sum_probs=74.9
Q ss_pred CceEEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHh
Q psy15713 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVL 80 (426)
Q Consensus 1 ~~~~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~ 80 (426)
++|||||+||+||+| ++++++|+++.++||++|.+|||..|.|... + .|. | +++.|||+|.+.+
T Consensus 242 ~~GiVle~~G~Gn~p---~~~~~~l~~a~~~Gi~VV~~Sr~~~G~v~~~---g-~l~--~-i~~~dlt~ekAr~------ 305 (327)
T 1o7j_A 242 VKGIVYAGMGAGSVS---VRGIAGMRKALEKGVVVMRSTRTGNGIVPPD---E-ELP--G-LVSDSLNPAHARI------ 305 (327)
T ss_dssp CSEEEEEEBTTTBCC---HHHHHHHHHHHHTTCEEEEEESSSBSCBCCC---T-TSS--S-EECBTCCHHHHHH------
T ss_pred CCEEEEeeECCCCCC---HHHHHHHHHHHHCCceEEEECCCCCCCcCCC---c-ccc--c-ccCCCCCHHHHHH------
Confidence 489999999999999 5999999999999999999999999999631 3 333 4 8899999999999
Q ss_pred cCCCcchhhhhhhhhhcccccccCCChhhHHHHHHHHhcCCccCHHHHHHHhcc
Q psy15713 81 SKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTIMLT 134 (426)
Q Consensus 81 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~ 134 (426)
+|+|+|+++ .+.++++++|.+
T Consensus 306 --------------------------------kL~~~L~~~-~~~~~i~~~f~~ 326 (327)
T 1o7j_A 306 --------------------------------LLMLALTRT-SDPKVIQEYFHT 326 (327)
T ss_dssp --------------------------------HHHHHTTTC-CCHHHHHHHHHH
T ss_pred --------------------------------HHHHHHhCC-CCHHHHHHHHhh
Confidence 999999997 899999998854
No 126
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=96.74 E-value=0.00033 Score=64.88 Aligned_cols=86 Identities=19% Similarity=0.259 Sum_probs=68.5
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-.......+..+.+.++|++ .+.++++..+......|+.+..
T Consensus 238 ~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~~~l~~a~~~Gi~---------VV~~Src~~G~v~~~~Y~~g~~ 308 (358)
T 2him_A 238 YPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIV---------VVNLTQCMSGKVNMGGYATGNA 308 (358)
T ss_dssp CTTCCHHHHHHHTSSSCSEEEEEEBTTTBCCCCHHHHHHHHHHHHTTCE---------EEEEESSSBCCCCCC-----CH
T ss_pred CCCCCHHHHHHHHhCCCCEEEEecCCCCCCCCcHHHHHHHHHHHHCCCE---------EEEEcCCCCCCCCccchhhhhH
Confidence 4889999999998877899999999998844323678889999999987 7778888888888889999888
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.+.||+++
T Consensus 309 l~~~GvI~~~dlt~e 323 (358)
T 2him_A 309 LAHAGVIGGADMTVE 323 (358)
T ss_dssp HHHTTCEECTTCCHH
T ss_pred HhhCCEEECCCCCHH
Confidence 888899999998865
No 127
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=96.66 E-value=0.00065 Score=64.24 Aligned_cols=84 Identities=19% Similarity=0.261 Sum_probs=72.4
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+.++++..+......|+.+..
T Consensus 310 ~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p--~~~~~~l~~a~~~Gi~---------VV~~Sqc~~G~V~~~~Y~~g~~ 378 (435)
T 2d6f_A 310 YPGISPDIIKWHLDEGYRGIVIEGTGLGHCP--DTLIPVIGEAHDMGVP---------VAMTSQCLNGRVNMNVYSTGRR 378 (435)
T ss_dssp CTTCCHHHHHHHHHTTCSEEEEEEBTTTBCC--GGGHHHHHHHHHTTCC---------EEEEETTCBSCCCTTSSHHHHH
T ss_pred CCCCCHHHHHHHHhCCCCEEEEecCCCCCcC--HHHHHHHHHHHhCCCE---------EEEeCCCCCCccCcccchhhhH
Confidence 5889999999999888899999999988743 4667788899999987 7788888888888889999988
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.+.||+++
T Consensus 379 l~~~GvI~~~dltpe 393 (435)
T 2d6f_A 379 LLQAGVIPCDDMLPE 393 (435)
T ss_dssp HHHTTCEECTTCCHH
T ss_pred HhhCCEEECCCCCHH
Confidence 888899999998865
No 128
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=96.65 E-value=0.0006 Score=64.54 Aligned_cols=84 Identities=18% Similarity=0.326 Sum_probs=72.3
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+.++++..+......|+.+..
T Consensus 313 ~pG~~~~~l~a~~~~g~~GiVleg~G~Gn~p--~~~~~~l~~a~~~Gi~---------VV~~Sqc~~G~V~~~~Y~~g~~ 381 (438)
T 1zq1_A 313 YPGISSEIIDFLVDKGYKGIVIEGTGLGHTP--NDIIPSIERAVEEGVA---------VCMTSQCIYGRVNLNVYSTGRK 381 (438)
T ss_dssp CTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC--GGGHHHHHHHHHTTCE---------EEEEESSSBSCCCCSSSHHHHH
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCE---------EEEeCCCCCCccCcccchhhhH
Confidence 5888999999999888899999999988743 4667788899999987 7788888888888889999988
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.+.||+++
T Consensus 382 l~~~GvI~~~dltpe 396 (438)
T 1zq1_A 382 LLKAGVIPCEDMLPE 396 (438)
T ss_dssp HHHTTCEECTTCCHH
T ss_pred HhhCCEEECCCCCHH
Confidence 888899999998865
No 129
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=96.33 E-value=0.00098 Score=60.99 Aligned_cols=85 Identities=18% Similarity=0.216 Sum_probs=70.8
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCC-cchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRG-TTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKT 92 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~-~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~ 92 (426)
+|++++++++++.+...+|+|++.++.+.-. ......+..+.+.++ ++ .+.++++..+......|+.|.
T Consensus 208 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~~~~l~~a~~~-i~---------VV~~Sqc~~G~v~~~~Y~~g~ 277 (328)
T 1wls_A 208 IPGLSGDIVREALRLGYKGIILEGYGVGGIPYRGTDLFEVVSSISKR-IP---------VVLTTQAIYDGVDLQRYKVGR 277 (328)
T ss_dssp CTTCCTHHHHHHHHTTCSEEEEEESSSCCCCCSSSSHHHHHHHHTTT-SC---------EEEEESSSBSCCCTTTBHHHH
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeeCCCCCCCCcHHHHHHHHHHhcC-Ce---------EEEecCCCCCccCCccchhhh
Confidence 5888999999999888899999999999833 223567778888888 76 677788888888888999998
Q ss_pred hhhhcccccccCCChh
Q psy15713 93 SLTDVGVITGYDMTPE 108 (426)
Q Consensus 93 ~~~~~~~i~~~~~~~~ 108 (426)
.....|++.+.||+++
T Consensus 278 ~l~~~Gvi~~~dlt~e 293 (328)
T 1wls_A 278 IALEAGVIPAGDMTKE 293 (328)
T ss_dssp HHHHTTCEECTTCCHH
T ss_pred HHhhCCEEECCCCCHH
Confidence 8888899999998865
No 130
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=95.09 E-value=0.0062 Score=55.67 Aligned_cols=81 Identities=9% Similarity=0.140 Sum_probs=61.1
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+.++++..+..... .+..
T Consensus 220 ~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn~p--~~~~~~l~~a~~~gi~---------VV~~Sr~~~G~v~~~---~g~~ 285 (326)
T 1nns_A 220 YANASDLPAKALVDAGYDGIVSAGVGNGNLY--KSVFDTLATAAKTGTA---------VVRSSRVPTGATTQD---AEVD 285 (326)
T ss_dssp CTTCCSHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCE---------EEEEESSSSSCBCSS---SSSC
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCE---------EEEECCCCCCCcCCC---hhhH
Confidence 4888999999998888899999999988743 4677889999999986 555555555544432 4555
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.++||+++
T Consensus 286 l~~~Gvi~~~dlt~e 300 (326)
T 1nns_A 286 DAKYGFVASGTLNPQ 300 (326)
T ss_dssp HHHHTEEECBTCCHH
T ss_pred HhcCCEEECCCCCHH
Confidence 566788888888765
No 131
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=95.00 E-value=0.0067 Score=55.52 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=60.7
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+.++++..+..... .+..
T Consensus 224 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~gi~---------VV~~Sr~~~G~v~~~---~g~~ 289 (330)
T 1wsa_A 224 HPDDTDVLVNAALQAGAKGIIHAGMGNGNPF--PLTQNALEKAAKSGVV---------VARSSRVGSGSTTQE---AEVD 289 (330)
T ss_dssp CSSCCSHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCE---------EEEEESSSSSCBCSS---SSSC
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCE---------EEEECCCCCCCcCcc---hhhH
Confidence 4888899999998887899999999888743 4677888999999986 555555555544422 4555
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.+.||+++
T Consensus 290 l~~~Gvi~~~dlt~e 304 (330)
T 1wsa_A 290 DKKLGFVATESLNPQ 304 (330)
T ss_dssp HHHHTEEECBSCCHH
T ss_pred HhcCCEEECCCCCHH
Confidence 566788888888765
No 132
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=94.78 E-value=0.0079 Score=55.06 Aligned_cols=82 Identities=11% Similarity=0.094 Sum_probs=59.8
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+..+++...+.-...|+.+.
T Consensus 230 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~---------VV~~Sr~~~~G~v~~~y~~~~- 297 (337)
T 4pga_A 230 YGNVTDTAYKALAQNGAKALIHAGTGNGSVS--SRVVPALQQLRKNGTQ---------IIRSSHVNQGGFVLRNAEQPD- 297 (337)
T ss_dssp CTTCCSHHHHHHHHTTCSEEEEEEBTTTBCC--TTTHHHHHHHHHTTCE---------EEEEESCCSBCCCCTTTSSCH-
T ss_pred CCCCCHHHHHHHHhcCCCEEEEEEeCCCCCC--HHHHHHHHHHHHCCCE---------EEEeccCCCCCccCccccccc-
Confidence 4778889999998888899999999988733 2567888999999986 556566633444334555542
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
...|++.++||+++
T Consensus 298 -~~~Gvi~~~dlt~e 311 (337)
T 4pga_A 298 -DKNDWVVAHDLNPE 311 (337)
T ss_dssp -HHHTCEECTTCCHH
T ss_pred -ccCCEEECCCCCHH
Confidence 46688888888765
No 133
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=94.49 E-value=0.0088 Score=54.78 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=59.6
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHH-HcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLT-DVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKT 92 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~-~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~ 92 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+. ++|++ .+.++++..+..... .+.
T Consensus 224 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~~gi~---------VV~~Sr~~~G~v~~~---~g~ 289 (331)
T 1agx_A 224 SDNMMPDAYQAFAKAGVKAIIHAGTGNGSMA--NYLVPEVRKLHDEQGLQ---------IVRSSRVAQGFVLRN---AEQ 289 (331)
T ss_dssp CSSCCTHHHHHHHTTTCSEEEEEEBTTTBCC--TTHHHHHHHHHHTTCCE---------EEEEESSCSSCBCTT---TSS
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHcCCCE---------EEEECCCCCCCcCcc---hhh
Confidence 4888999999998887899999999988733 45777888888 99976 555555554444322 455
Q ss_pred hhhhcccccccCCChh
Q psy15713 93 SLTDVGVITGYDMTPE 108 (426)
Q Consensus 93 ~~~~~~~i~~~~~~~~ 108 (426)
.....|++.+.||+++
T Consensus 290 ~l~~~Gvi~~~dlt~e 305 (331)
T 1agx_A 290 PDDKYGWIAAHDLNPQ 305 (331)
T ss_dssp CHHHHTCEECBTCCHH
T ss_pred HHhhCCEEECCCCCHH
Confidence 5566788888888755
No 134
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=93.73 E-value=0.023 Score=52.06 Aligned_cols=80 Identities=14% Similarity=0.223 Sum_probs=58.6
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhhh
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKTS 93 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~~ 93 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+.++++..+...- .+..
T Consensus 227 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~---------VV~~Sr~~~G~v~~----~g~~ 291 (332)
T 2wlt_A 227 HAGMTPDLFQASLNSHAKGVVIAGVGNGNVS--AGFLKAMQEASQMGVV---------IVRSSRVGSGGVTS----GEID 291 (332)
T ss_dssp CTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCE---------EEEEESSSSSCCCS----SSSC
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCE---------EEEECCCCCCCcCc----chhh
Confidence 4888899999998887899999999887733 4677889999999986 55555555444431 1224
Q ss_pred hhhcccccccCCChh
Q psy15713 94 LTDVGVITGYDMTPE 108 (426)
Q Consensus 94 ~~~~~~i~~~~~~~~ 108 (426)
....|++.+.||+++
T Consensus 292 l~~~Gvi~~~dlt~e 306 (332)
T 2wlt_A 292 DKAYGFITSDNLNPQ 306 (332)
T ss_dssp HHHHTCEECTTCCHH
T ss_pred hhcCCEEECCCCCHH
Confidence 456688888887755
No 135
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=92.60 E-value=0.028 Score=51.33 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCC-CchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcccCCCCCHHHHHHHHHHHhcCCCcchhhhhh
Q psy15713 14 FPS-NRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVITGYDMTPESALTKLSYVLSKSDWTLEKKKT 92 (426)
Q Consensus 14 ~p~-~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~~~~d~t~e~~~~~l~~~~~~~~l~~~~~~~ 92 (426)
.|+ +++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++ .+..+++..+..... .
T Consensus 229 ~pG~~~~~~l~a~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~---------VV~~Src~~G~V~~~-----~ 292 (334)
T 3nxk_A 229 YSNDGSGVAAKALFEHGTKGIVVAGSGAGSIH--KNQKDVLKELLKKGLK---------VVVSSRVVAGCVAVS-----D 292 (334)
T ss_dssp CTTCCHHHHHHHHHHTTCCEEEEEEBTTTBCC--HHHHHHHHHHHTTTCE---------EEEEESSSBSCCCCC-----H
T ss_pred eCCCCCHHHHHHHHhCCCCEEEEeeECCCCCc--HHHHHHHHHHHHCCCE---------EEEeCCCCCCccCcc-----c
Confidence 477 8889999998888899999999977633 3678889999999976 445455554444221 1
Q ss_pred hhhhcccccccCCChh
Q psy15713 93 SLTDVGVITGYDMTPE 108 (426)
Q Consensus 93 ~~~~~~~i~~~~~~~~ 108 (426)
.....|++.++||+++
T Consensus 293 ~l~~~Gvi~~~dlt~e 308 (334)
T 3nxk_A 293 SDEKLGFISAEDLNPQ 308 (334)
T ss_dssp HHHHHTEEECTTCCHH
T ss_pred ccccCCEEECCCCCHH
Confidence 2245677777777654
No 136
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=91.07 E-value=0.075 Score=48.47 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=40.1
Q ss_pred CCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCcc
Q psy15713 14 FPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVI 62 (426)
Q Consensus 14 ~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~~ 62 (426)
+|++++++++++.+...+|+|++.++.+.-. ....+..+.+.++|++
T Consensus 226 ~pG~~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~ 272 (327)
T 1o7j_A 226 YQDDPEYLYDAAIQHGVKGIVYAGMGAGSVS--VRGIAGMRKALEKGVV 272 (327)
T ss_dssp CTTCCTHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCE
T ss_pred CCCCCHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCce
Confidence 4888999999998887899999999988743 5677888999999976
No 137
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=37.60 E-value=92 Score=23.84 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=28.7
Q ss_pred EEEEecCCCCCCCCchHHHHHHHHhhhCCcEEEEeccCCCCcchhHHHhhHHHHHcCc
Q psy15713 4 VILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGV 61 (426)
Q Consensus 4 ~~~~~~g~g~~p~~~~~~~~~~~~~~~~g~~i~~~~q~~~~~~~~~~~~~~~l~~~g~ 61 (426)
|.+++|-. + ++.++++|.++..|||-+-.................+.|.+.|+
T Consensus 30 I~i~~~~~---~--~~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv 82 (155)
T 1byr_A 30 IRMMAYSF---T--APDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGI 82 (155)
T ss_dssp EEEEESSB---C--CHHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTC
T ss_pred EEEEEEEe---C--CHHHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCC
Confidence 45666654 2 25778888887778866555554433221122233455555664
No 138
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=31.52 E-value=36 Score=19.55 Aligned_cols=21 Identities=19% Similarity=0.390 Sum_probs=17.1
Q ss_pred HHHHHHHhcCCHHHHHHHhhh
Q psy15713 178 AMLQSAVMTGDLKRMEEIKGY 198 (426)
Q Consensus 178 t~L~~Aa~~g~~~~v~~Ll~~ 198 (426)
.-+..||..|+.+.++.|-..
T Consensus 15 QqiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHH
Confidence 356779999999999988654
No 139
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=28.54 E-value=1.5e+02 Score=27.48 Aligned_cols=64 Identities=20% Similarity=0.124 Sum_probs=41.7
Q ss_pred HHHHhcCCHHHHHHHhhhhcCC-CCCcccccccCCccccccccccCCcccccCCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q psy15713 181 QSAVMTGDLKRMEEIKGYVKRP-QGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIV 259 (426)
Q Consensus 181 ~~Aa~~g~~~~v~~Ll~~~~~~-~g~~~l~~a~~~~~~~~~~~~~~~~~~l~~g~~~~~~d~~g~TpLh~Aa~~g~~~iv 259 (426)
+..+..|+...|+..+..+.+. ..-|+...+. | .+ .++ -.-|.|-+|+|++..+.+++
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~l-----------------l-n~--~~a-f~~g~tlvhlair~~r~~~l 85 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRL-----------------L-NR--PSA-FDVGYTLVHLAIRFQRQDML 85 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHH-----------------H-CC--TTT-CCTTCCHHHHHHHTTCHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHH-----------------h-CC--Ccc-cccCchhhhhhhhhhhhhHH
Confidence 3456689999999888873322 2222222111 0 01 122 34689999999999999999
Q ss_pred HHHHHC
Q psy15713 260 KYLLLN 265 (426)
Q Consensus 260 ~~Ll~~ 265 (426)
..|+..
T Consensus 86 ~~ll~~ 91 (454)
T 3zrh_A 86 AILLTE 91 (454)
T ss_dssp HHHHHH
T ss_pred HHhhhc
Confidence 999974
No 140
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=27.28 E-value=4.1e+02 Score=25.20 Aligned_cols=94 Identities=9% Similarity=-0.033 Sum_probs=59.4
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHH----HHCCCCCccccccCccchhc--ccccccccccccCCchhHHHHHHH
Q psy15713 233 GADLSIKDADQRSALHIACCEGHTDIVKYL----LLNGASVHEKDRVQLTVLTN--IRGELTSEKSTEGGYDLVGAVVRL 306 (426)
Q Consensus 233 g~~~~~~d~~g~TpLh~Aa~~g~~~iv~~L----l~~ga~~~~~d~~g~tpL~~--a~~~~~~~~~~~~~~~~~~~iv~~ 306 (426)
|..+|.... .+.+...+..|+.+-+.-+ .+.|..++... .++|.. +..+. .+.+..+.+.
T Consensus 100 G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t---yn~lI~~~~~~g~---------~~~A~~l~~~ 165 (501)
T 4g26_A 100 KVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS---YGPALFGFCRKGD---------ADKAYEVDAH 165 (501)
T ss_dssp TCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH---HHHHHHHHHHTTC---------HHHHHHHHHH
T ss_pred CCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce---ehHHHHHHHHCCC---------HHHHHHHHHH
Confidence 665554332 2456677888887654444 45687776543 344444 66666 7766678888
Q ss_pred hhhhcccccchhhhhhhhHHHHHHHhhCchhHHHHHhh
Q psy15713 307 LNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKG 344 (426)
Q Consensus 307 Ll~~ga~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L~~ 344 (426)
+.+.|..++. ....+.+...++.|+.+-+..++.
T Consensus 166 M~~~G~~Pd~----~ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 166 MVESEVVPEE----PELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHTTCCCCH----HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHhcCCCCCH----HHHHHHHHHHhhCCCHHHHHHHHH
Confidence 8888887754 234566777788888776655543
No 141
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=25.61 E-value=97 Score=29.66 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=43.4
Q ss_pred HHHHHHHHCCCCCccccccCccchhc--ccccccccccccCCchhHHHHHHHhhhhcccccchhhhhhhhHHHHHHHhhC
Q psy15713 257 DIVKYLLLNGASVHEKDRVQLTVLTN--IRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334 (426)
Q Consensus 257 ~iv~~Ll~~ga~~~~~d~~g~tpL~~--a~~~~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~g~t~L~~A~~~g 334 (426)
++.+.+.+.|..+|... .|.|.. +..+. .+.+..+++.+.+.|..++. ....+.+...++.|
T Consensus 91 ~lf~~M~~~G~~Pd~~t---yn~lI~~~~~~g~---------~~~A~~l~~~M~~~g~~Pd~----~tyn~lI~~~~~~g 154 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT---FTNGARLAVAKDD---------PEMAFDMVKQMKAFGIQPRL----RSYGPALFGFCRKG 154 (501)
T ss_dssp HHHHHHHHTTCCCCHHH---HHHHHHHHHHHTC---------HHHHHHHHHHHHHTTCCCCH----HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCHHH---HHHHHHHHHhcCC---------HHHHHHHHHHHHHcCCCCcc----ceehHHHHHHHHCC
Confidence 45666677788776543 333433 56666 66666677777777776654 12345666677788
Q ss_pred chhHHHHH
Q psy15713 335 DLKRMEEI 342 (426)
Q Consensus 335 ~~~~v~~L 342 (426)
+.+-+..+
T Consensus 155 ~~~~A~~l 162 (501)
T 4g26_A 155 DADKAYEV 162 (501)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 87666555
No 142
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=24.74 E-value=37 Score=24.37 Aligned_cols=19 Identities=32% Similarity=0.857 Sum_probs=16.0
Q ss_pred HHhhhCCcEEEEeccCCCC
Q psy15713 26 KSANERGVIIVNCSQCSRG 44 (426)
Q Consensus 26 ~~~~~~g~~i~~~~q~~~~ 44 (426)
+.++.+|+||+.|.-|..-
T Consensus 29 k~aY~~GvViv~C~gC~n~ 47 (100)
T 2e2z_A 29 KQAYEKGTVLISCPHCKVR 47 (100)
T ss_dssp HHHHHTSEEEEECTTTCCE
T ss_pred HHHhhCCEEEEEcCCCccc
Confidence 5678899999999999743
No 143
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=20.60 E-value=79 Score=23.60 Aligned_cols=30 Identities=27% Similarity=0.236 Sum_probs=21.1
Q ss_pred ceEEEEecCCCCCCCCchHHHHHHHHhh-hCCcEEE
Q psy15713 2 NGVILQTYGSGNFPSNRADLLELLKSAN-ERGVIIV 36 (426)
Q Consensus 2 ~~~~~~~~g~g~~p~~~~~~~~~~~~~~-~~g~~i~ 36 (426)
.+-+++|-|+ +| ++.++.++++. .+||+|.
T Consensus 26 ~~~iI~t~Gs--i~---~~~l~~I~~~~~~r~VIi~ 56 (119)
T 2fcj_A 26 PVVIVCTNGT--IS---DARLEELADELEGYDVYLL 56 (119)
T ss_dssp CCEEEECCSC--CC---HHHHHHHHHHTTTSEEEEE
T ss_pred CCCEEEeCCc--cC---HHHHHHHHHHhcCCCEEEE
Confidence 3567888886 54 48888888887 4666655
Done!