RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15713
(426 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 90.8 bits (224), Expect = 1e-20
Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 20/195 (10%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEK 291
+GA ++ + + LH+A GHT++ KYLL N A V+ K + T L
Sbjct: 22 RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPL---------HC 72
Query: 292 STEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVY 351
+ G+ +V+LL + P + + + K +
Sbjct: 73 AARIGHT---NMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 129
Query: 352 EFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIV 411
+ P L + + L L + A + + + LH+A + DIV
Sbjct: 130 KKGFTP-LHVAAKYGKVRVAELL-------LERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181
Query: 412 KYLLLNGASVHEKDR 426
K LL G S H
Sbjct: 182 KLLLPRGGSPHSPAW 196
Score = 77.3 bits (189), Expect = 5e-16
Identities = 44/222 (19%), Positives = 68/222 (30%), Gaps = 37/222 (16%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTS 289
L + A + + + LH+A + DIVK LL G S H T L +
Sbjct: 152 LERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV 211
Query: 290 EK-------------------------STEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFP 324
E + EG ++V ++ +K
Sbjct: 212 EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG------L 265
Query: 325 AMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQ 384
L G + + + + + + + T L + +
Sbjct: 266 TPLHLVAQEGHVPVADVLIKHGVMV--DATTRMGYTPLHVASHYGNIKLVKFLLQHQADV 323
Query: 385 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426
A K S LH A +GHTDIV LL NGAS +E
Sbjct: 324 NA----KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSS 361
Score = 69.2 bits (168), Expect = 2e-13
Identities = 35/186 (18%), Positives = 59/186 (31%), Gaps = 30/186 (16%)
Query: 246 ALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVR 305
LH+A GH IVK LL GAS + + T L + G+ V +
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHM---------AARAGHT---EVAK 50
Query: 306 LL-----NLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLT 360
L + K KDD L A G ++ + +N +
Sbjct: 51 YLLQNKAKV-NAKAKDDQTP------LHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 103
Query: 361 TLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGAS 420
+ + T ++ + A + + LH+A G + + LL A
Sbjct: 104 HIAAREGHVETVLALLE------KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 157
Query: 421 VHEKDR 426
+ +
Sbjct: 158 PNAAGK 163
Score = 60.8 bits (146), Expect = 1e-10
Identities = 32/192 (16%), Positives = 52/192 (27%), Gaps = 56/192 (29%)
Query: 238 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGY 297
+ + + LH+ EGH + L+ +G V R+ T L G
Sbjct: 259 LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVAS--------HYGNI 310
Query: 298 DLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNP 357
LV +++ K K L A G
Sbjct: 311 KLVKFLLQHQADVNAKTKLGYSP------LHQAAQQGHT--------------------- 343
Query: 358 HLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL- 416
+I L L GA + +D + L IA G+ + L +
Sbjct: 344 -----------DIVTLL-------LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 385
Query: 417 --NGASVHEKDR 426
+ V D+
Sbjct: 386 TDETSFVLVSDK 397
Score = 51.5 bits (122), Expect = 8e-08
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 24/197 (12%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEK 291
A ++ K D ++ LH A GHT++VK LL N A+ + T L E E
Sbjct: 55 NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 114
Query: 292 STEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEI--KGYVSNI 349
L ++ + L A G ++ E + + N
Sbjct: 115 VL--------------ALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 160
Query: 350 VYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 409
+ + P L + + +I + L +G + + LHIA + +
Sbjct: 161 AGKNGLTP-LHVAVHHNNLDIVKLLL-------PRGGSPHSPAWNGYTPLHIAAKQNQVE 212
Query: 410 IVKYLLLNGASVHEKDR 426
+ + LL G S + +
Sbjct: 213 VARSLLQYGGSANAESV 229
Score = 51.1 bits (121), Expect = 1e-07
Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 20/196 (10%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSE 290
+ A + + LH+A G + + LL A + + LT L
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPL--------HV 171
Query: 291 KSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIV 350
D+V ++ + + A + L ++ S
Sbjct: 172 AVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL-----LQYGGSANA 226
Query: 351 YEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDI 410
L E+ L + A+ ++ + + LH+ EGH +
Sbjct: 227 ESVQGVTPLHLAAQEGHAEMVALLL-------SKQANGNLGNKSGLTPLHLVAQEGHVPV 279
Query: 411 VKYLLLNGASVHEKDR 426
L+ +G V R
Sbjct: 280 ADVLIKHGVMVDATTR 295
Score = 50.0 bits (118), Expect = 3e-07
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL---NGASVHEKDRVQLTV 279
L GA + +D + L IA G+ + L + + V D+ +++
Sbjct: 350 LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase
subunit D, GatD {Methanobacterium thermoautotrophicum
[TaxId: 145262]}
Length = 352
Score = 86.7 bits (214), Expect = 2e-19
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 44/147 (29%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDV 59
G++++ G G+ P L+ ++ A++ GV + SQC G + N+Y TG+ L
Sbjct: 243 YRGIVIEGTGLGHCPDT---LIPVIGEAHDMGVPVAMTSQCLNGRVNMNVYSTGRRLLQA 299
Query: 60 GVITGYDMTPESALTKLSYVLSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLS 119
GVI DM PE A K+ +VL ++D
Sbjct: 300 GVIPCDDMLPEVAYVKMCWVLGQTD----------------------------------- 324
Query: 120 KSDWTLEKKKTIMLTNIRGELTSEKST 146
E + +M NI GE+ E+++
Sbjct: 325 ----DPEMAREMMRENIAGEIN-ERTS 346
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase
subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Length = 363
Score = 86.7 bits (214), Expect = 2e-19
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 43/144 (29%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRG-TTSNIYETGKSLTDV 59
G++++ G G+ P++ ++ ++ A E GV + SQC G N+Y TG+ L
Sbjct: 254 YKGIVIEGTGLGHTPND---IIPSIERAVEEGVAVCMTSQCIYGRVNLNVYSTGRKLLKA 310
Query: 60 GVITGYDMTPESALTKLSYVLSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLS 119
GVI DM PE+A KL +VL +
Sbjct: 311 GVIPCEDMLPETAYVKLMWVLGHT------------------------------------ 334
Query: 120 KSDWTLEKKKTIMLTNIRGELTSE 143
LE+ + +MLTN GE+T
Sbjct: 335 ---QNLEEVRKMMLTNYAGEITPY 355
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 84.7 bits (208), Expect = 5e-19
Identities = 32/217 (14%), Positives = 73/217 (33%), Gaps = 14/217 (6%)
Query: 216 QEITQKLDIDGVPSLFQGADLSIK-DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 274
+ Q+++ + +L+I D + LH + ++VK+L+ +G++ D
Sbjct: 82 DSLLQEVNDAFPNTQL---NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN 138
Query: 275 VQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTG 334
+ + + A++ L + R++L ++ S +
Sbjct: 139 MGES-----CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGC 193
Query: 335 DLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSL-----FQGADLS 389
+ + IV + + T D + L+
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253
Query: 390 IKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426
+D++ + L+IA G+ IV LL GA ++
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 290
Score = 55.4 bits (132), Expect = 3e-09
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280
L+ +D++ + L+IA G+ IV LL GA ++ L +
Sbjct: 247 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPV 296
Score = 26.9 bits (58), Expect = 4.1
Identities = 5/21 (23%), Positives = 7/21 (33%)
Query: 230 LFQGADLSIKDADQRSALHIA 250
L GAD I + +
Sbjct: 279 LDYGADPFIANKSGLRPVDFG 299
>d2ocda1 c.88.1.1 (A:2-337) Asparaginase type II {Vibrio cholerae
[TaxId: 666]}
Length = 336
Score = 81.4 bits (200), Expect = 1e-17
Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 41/142 (28%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTS-NIYETGKSLTDV 59
+N +IL T+G GN P N +LL LK+A+ERGVI+VN +QC G + Y TG +L D
Sbjct: 234 VNAMILLTFGVGNAPQN-PELLAQLKAASERGVIVVNLTQCLAGKVNMGGYATGCALADA 292
Query: 60 GVITGYDMTPESALTKLSYVLSKSDWTLEKKKTSLTDVGVITGYDMTPESALTKLSYVLS 119
GVI+GYDMTPE+AL KL Y+LS+
Sbjct: 293 GVISGYDMTPEAALAKLHYLLSQ------------------------------------- 315
Query: 120 KSDWTLEKKKTIMLTNIRGELT 141
+ + E+ K M +RGE+T
Sbjct: 316 --NLSYEEVKAKMQQVLRGEMT 335
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli
[TaxId: 562]}
Length = 326
Score = 79.4 bits (195), Expect = 4e-17
Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVG 60
+G++ G+GN + + L +A + G +V S+ G T+ + G
Sbjct: 236 YDGIVSAGVGNGNLYK---SVFDTLATAAKTGTAVVRSSRVPTGATT--QDAEVDDAKYG 290
Query: 61 VITGYDMTPESALTKLSYVLSKSDWTLEKKK 91
+ + P+ A L L+++ + ++
Sbjct: 291 FVASGTLNPQKARVLLQLALTQTKDPQQIQQ 321
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes
[TaxId: 844]}
Length = 328
Score = 79.0 bits (194), Expect = 7e-17
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVG 60
G+I G+GN L+ A + GV++ S+ G+T+ E +G
Sbjct: 238 AKGIIHAGMGNGNPFP---LTQNALEKAAKSGVVVARSSRVGSGSTT--QEAEVDDKKLG 292
Query: 61 VITGYDMTPESALTKLSYVLSKSD 84
+ + P+ A L L+K+
Sbjct: 293 FVATESLNPQKARVLLMLALTKTS 316
>d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A
[TaxId: 306]}
Length = 330
Score = 77.1 bits (189), Expect = 3e-16
Identities = 14/82 (17%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 3 GVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVGVI 62
+I G+G+ S ++ L+ + G I+ S ++G + + +
Sbjct: 241 ALIHAGTGNGSVSSR---VVPALQQLRKNGTQIIRSSHVNQGGF-VLRNAEQPDDKNDWV 296
Query: 63 TGYDMTPESALTKLSYVLSKSD 84
+D+ PE A ++K+
Sbjct: 297 VAHDLNPEKARILAMVAMTKTQ 318
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter
glutaminasificans [TaxId: 474]}
Length = 331
Score = 77.1 bits (189), Expect = 3e-16
Identities = 18/84 (21%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVG 60
+ +I G+G+ + E+ K +E+G+ IV S+ ++G + + G
Sbjct: 240 VKAIIHAGTGNGSMANYLVP--EVRKLHDEQGLQIVRSSRVAQGFV--LRNAEQPDDKYG 295
Query: 61 VITGYDMTPESALTKLSYVLSKSD 84
I +D+ P+ A ++ L+K++
Sbjct: 296 WIAAHDLNPQKARLLMALALTKTN 319
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi
[TaxId: 556]}
Length = 325
Score = 75.9 bits (186), Expect = 6e-16
Identities = 13/84 (15%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVG 60
+ G++ G+G+ + ++ A E+GV+++ ++ G E +
Sbjct: 240 VKGIVYAGMGAGSVSV---RGIAGMRKALEKGVVVMRSTRTGNGIVPPDEE-------LP 289
Query: 61 VITGYDMTPESALTKLSYVLSKSD 84
+ + P A L L+++
Sbjct: 290 GLVSDSLNPAHARILLMLALTRTS 313
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 74.8 bits (182), Expect = 1e-15
Identities = 38/260 (14%), Positives = 70/260 (26%), Gaps = 44/260 (16%)
Query: 203 QGALPFALNSSLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 262
+ + ++ IT+ + + V I R+ LH + + L
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNI--------IDPRHNRTVLHWIASNSSAEKSEDL 52
Query: 263 LLN--------GASVHEKDRVQLTVLTNIRGELTSEKSTE-------------------- 294
+++ GA V+ D + T L
Sbjct: 53 IVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALH 112
Query: 295 --GGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYE 352
G +V +LN T K + L ++ K V
Sbjct: 113 QAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKV 172
Query: 353 FSMNPHLTTLISN------LPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEG 406
+ I +G++ +D D ++ + +A EG
Sbjct: 173 DYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 232
Query: 407 HTDIVKYLLLNGASVHEKDR 426
++V YL+ GASV D
Sbjct: 233 RIEVVMYLIQQGASVEAVDA 252
Score = 55.5 bits (132), Expect = 3e-09
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280
+G++ +D D ++ + +A EG ++V YL+ GASV D T
Sbjct: 209 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 258
Score = 50.5 bits (119), Expect = 1e-07
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 263
+ QGA + DA +A +A H +IV
Sbjct: 241 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 50.5 bits (119), Expect = 1e-07
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 382 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 415
+ QGA + DA +A +A H +IV
Sbjct: 241 IQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 72.7 bits (177), Expect = 6e-15
Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 53/189 (28%)
Query: 240 DADQRSALHIACCEGHTDIVKYLLLN-GASVHEKDRVQLTVLTNIRGELTSEKSTEGGYD 298
+AL A +GH +++K LL GA V+ D + L + +
Sbjct: 145 RKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL 204
Query: 299 LV--GAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMN 356
L+ GA V + + L AV L ++
Sbjct: 205 LLDHGADV------NVRGERGKTP------LILAVEKKHLGLVQR--------------- 237
Query: 357 PHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL 416
L+ + +++ D+D ++AL +A I + L
Sbjct: 238 -----LLEQ------------------EHIEINDTDSDGKTALLLAVELKLKKIAELLCK 274
Query: 417 NGASVHEKD 425
GAS D
Sbjct: 275 RGASTDCGD 283
Score = 60.0 bits (144), Expect = 1e-10
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 233 GADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRV 275
+++ D+D ++AL +A I + L GAS D V
Sbjct: 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLV 285
Score = 59.2 bits (142), Expect = 2e-10
Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 14/188 (7%)
Query: 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVG 301
+ L A D+V+ LL GA+V+ ++ G + + +
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQE--------EEGGWTPLHNAVQMSRE--- 52
Query: 302 AVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTT 361
+V LL ++ P +L + + L ++ KG N + +
Sbjct: 53 DIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA 112
Query: 362 LISNLPQEITQKLD--IDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLN-G 418
+ + + + D +AL A +GH +++K LL G
Sbjct: 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 172
Query: 419 ASVHEKDR 426
A V+ D
Sbjct: 173 ADVNACDN 180
Score = 51.1 bits (121), Expect = 8e-08
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLL-NGASVHEKDRVQLTVL 280
L GAD++++ ++ L +A + H +V+ LL +++ D T L
Sbjct: 206 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTAL 257
Score = 38.0 bits (87), Expect = 0.001
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 223 DIDGVPSLFQ-GADLSIKDAD-QRSALHIACCEGHTDIVKYLL 263
D+D V L + GA+++ ++ + + LH A DIV+ LL
Sbjct: 17 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 65.7 bits (158), Expect = 2e-13
Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 20/174 (11%)
Query: 245 SALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVV 304
+ L A G + + LL N +V+ + N G + G ++ ++
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQ---------NGFGRTALQVMKLGNPEIARRLL 53
Query: 305 RLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLIS 364
KD+ + A L + N
Sbjct: 54 LRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA------ 107
Query: 365 NLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNG 418
L + +++ ++ +A +A G ++V + NG
Sbjct: 108 -----KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 50.7 bits (119), Expect = 3e-08
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 397 SALHIACCEGHTDIVKYLLLNGASVHEKDR 426
+ L A G + + LL N +V+ ++
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNG 32
Score = 46.4 bits (108), Expect = 7e-07
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 238 IKDADQRSALHIACCEGHTDIVKYLLLNG 266
++ +A +A G ++V + NG
Sbjct: 128 HRNHKGDTACDLARLYGRNEVVSLMQANG 156
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 63.8 bits (154), Expect = 2e-12
Identities = 29/186 (15%), Positives = 61/186 (32%), Gaps = 54/186 (29%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTS 289
L +GA ++ + + + LH A + +I LL GA+ KD + T + +
Sbjct: 90 LGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK--- 146
Query: 290 EKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNI 349
G + + L K +++ L A ++ +
Sbjct: 147 -----------GNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK--------- 186
Query: 350 VYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTD 409
L+S GA + I++ ++++ L +A G
Sbjct: 187 -----------LLVSQ-------------------GASIYIENKEEKTPLQVA-KGGLGL 215
Query: 410 IVKYLL 415
I+K ++
Sbjct: 216 ILKRMV 221
Score = 48.0 bits (113), Expect = 5e-07
Identities = 27/181 (14%), Positives = 48/181 (26%), Gaps = 54/181 (29%)
Query: 247 LHIACCEGHTDIVKYLLL-NGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVR 305
+ G + +K +L + + D
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTD-------------------------------- 34
Query: 306 LLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISN 365
D R+ L A ++ V + + L S
Sbjct: 35 ----------QDSRTALHWA----CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASA 80
Query: 366 LPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKD 425
EI + L L +GA ++ + + + LH A + +I LL GA+ KD
Sbjct: 81 GRDEIVKAL-------LGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKD 133
Query: 426 R 426
Sbjct: 134 H 134
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 63.7 bits (153), Expect = 3e-12
Identities = 35/213 (16%), Positives = 59/213 (27%), Gaps = 22/213 (10%)
Query: 217 EITQKLDIDGVPSLFQGADLSIK-DADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRV 275
++ L L QGA+L+ D ++LH+A D K LL GA + +D
Sbjct: 3 QVISDL-------LAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNT 55
Query: 276 QLTVLTNI--RGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMT 333
T L + + T L L +A
Sbjct: 56 GRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADAD 115
Query: 334 GDLK-----------RMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSL 382
+ V+ ++ + ++ + +L
Sbjct: 116 INAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKAL 175
Query: 383 FQ-GADLSIKDADQRSALHIACCEGHTDIVKYL 414
A+ I D R +A H DIV+ L
Sbjct: 176 LDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 37.5 bits (85), Expect = 0.002
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 235 DLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTE 294
+ +D + L +A EG + K LL N A+ D + + ++E
Sbjct: 148 NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPR---------DVASE 198
Query: 295 GGYDLVGAVVRLLN 308
+ +VRLL+
Sbjct: 199 RLHH---DIVRLLD 209
Score = 35.2 bits (79), Expect = 0.008
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 387 DLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426
+ +D + L +A EG + K LL N A+ D
Sbjct: 148 NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDH 187
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 63.6 bits (153), Expect = 4e-12
Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 9/174 (5%)
Query: 248 HIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLL 307
H+AC LL S + TS
Sbjct: 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142
Query: 308 NLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIK--GYVSNIVYEFSMNPHLTTLISN 365
+ + + + L AV+ D + + ++ G N L +
Sbjct: 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202
Query: 366 LPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA 419
+ + L L GAD + + R+ L A + + + L +GA
Sbjct: 203 QAASVLELL-------LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 54.3 bits (129), Expect = 5e-09
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA 267
L GAD + + R+ L A + + + L +GA
Sbjct: 212 LKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 50.5 bits (119), Expect = 1e-07
Identities = 27/219 (12%), Positives = 54/219 (24%), Gaps = 31/219 (14%)
Query: 239 KDADQRSALHIACCEGHTDIVKYLLLNGAS---VHEKDRVQLTVLT------NIRGELTS 289
D +ALH+A H + +LL A + ++ + T L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Query: 290 EKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNI 349
+ G L+L VL D +
Sbjct: 65 YAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTS 124
Query: 350 VYEFSMNPHLTTLISNLPQEITQKLDID----------------------GVPSLFQGAD 387
+++ P++ +L ++ +
Sbjct: 125 HAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184
Query: 388 LSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDR 426
+ R+ LH+A +++ LL GA +
Sbjct: 185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223
Score = 35.1 bits (79), Expect = 0.013
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 243 QRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280
R+ LH+A +++ LL GA + T L
Sbjct: 192 GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 63.6 bits (153), Expect = 6e-12
Identities = 48/267 (17%), Positives = 97/267 (36%), Gaps = 42/267 (15%)
Query: 190 KRMEEIKGYVKRPQGALPFALNSSLPQEITQKLDIDGVPSLF----------------QG 233
KR E++K ++ L + + K+ D +G
Sbjct: 9 KRNEQLKRWIGSET-----DLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERG 63
Query: 234 ADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNI---------- 283
AD++ + D +ALH AC + + D+VK+L+ NGA++++ D L
Sbjct: 64 ADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAE 123
Query: 284 ----RGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRM 339
+G ++EG L A + + + + + A + + R
Sbjct: 124 YLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQ 183
Query: 340 EEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSAL 399
G+++++ + S L + E+ + L D++IKD D + L
Sbjct: 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI-------QARYDVNIKDYDGWTPL 236
Query: 400 HIACCEGHTDIVKYLLLNGASVHEKDR 426
H A G + + L+ N + ++
Sbjct: 237 HAAAHWGKEEACRILVENLCDMEAVNK 263
Score = 54.0 bits (128), Expect = 1e-08
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLT----NIRGE 286
D++IKD D + LH A G + + L+ N + ++V T +I G
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279
Query: 287 L 287
L
Sbjct: 280 L 280
Score = 35.9 bits (81), Expect = 0.006
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 263
+ D+ + ++A +A DI+ YL
Sbjct: 252 VENLCDMEAVNKVGQTAFDVAD----EDILGYLE 281
Score = 35.9 bits (81), Expect = 0.006
Identities = 7/34 (20%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 382 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 415
+ D+ + ++A +A DI+ YL
Sbjct: 252 VENLCDMEAVNKVGQTAFDVAD----EDILGYLE 281
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 61.8 bits (149), Expect = 3e-11
Identities = 18/210 (8%), Positives = 43/210 (20%), Gaps = 29/210 (13%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQL--TVLTNIRGELTS 289
+ + A+ A +A GH ++ L +
Sbjct: 115 SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 174
Query: 290 EKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDL---KRMEEIKGYV 346
+ RL L + +++ + A +AV G + + +
Sbjct: 175 HV-----------LNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVML 223
Query: 347 SNIVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLF---QGADLSIKDADQ-------R 396
+ + + + +
Sbjct: 224 AYAEIHEFEYGEKYVNPFIARH---VNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYML 280
Query: 397 SALHIACCEGHTDIVKYLLLNGASVHEKDR 426
L E D +++LL
Sbjct: 281 RNLIRRNDEVLLDDIRFLLSIPGIKALAPT 310
Score = 47.2 bits (111), Expect = 2e-06
Identities = 18/204 (8%), Positives = 46/204 (22%), Gaps = 30/204 (14%)
Query: 230 LFQGADLSIKDADQ--RSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGEL 287
+ A +A GH ++ L + +
Sbjct: 146 CELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAM------IQAENYYA 199
Query: 288 TSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVS 347
+ G+ V+ L + + + + + R +
Sbjct: 200 FRWAAVGRGHH---NVINFL---LDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 253
Query: 348 NIVYEFSMNPHLTTLISNLPQEI----------TQKLDIDGVPSLFQ------GADLSIK 391
+ + + + + + ++ +D + L A +
Sbjct: 254 DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 313
Query: 392 DADQRSALHIACCEGHTDIVKYLL 415
D L +A G+ LL
Sbjct: 314 PGDANELLRLALRLGNQGACALLL 337
Score = 41.0 bits (95), Expect = 2e-04
Identities = 8/37 (21%), Positives = 13/37 (35%)
Query: 227 VPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 263
+P + A + D L +A G+ LL
Sbjct: 301 IPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337
Score = 40.3 bits (93), Expect = 3e-04
Identities = 7/44 (15%), Positives = 12/44 (27%), Gaps = 3/44 (6%)
Query: 385 GADLSIKDADQRSALHIACCEGHTDIVKY---LLLNGASVHEKD 425
+D K +A G + + LL + V
Sbjct: 80 WSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ 123
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 57.1 bits (136), Expect = 2e-10
Identities = 26/171 (15%), Positives = 42/171 (24%), Gaps = 23/171 (13%)
Query: 246 ALHIACCEGHTDIVKYLLL-NGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVV 304
L A G V+ LL +R T L + T+
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQG------ 58
Query: 305 RLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLIS 364
S P + D ++ G N+ P +
Sbjct: 59 -------ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE 111
Query: 365 NLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLL 415
++ +DL +DA + L +A G D+V L
Sbjct: 112 GHTAVVSFLAAE---------SDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 47.1 bits (110), Expect = 5e-07
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 234 ADLSIKDADQRSALHIACCEGHTDIVKYLL 263
+DL +DA + L +A G D+V L
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 38.6 bits (88), Expect = 4e-04
Identities = 7/30 (23%), Positives = 9/30 (30%), Gaps = 1/30 (3%)
Query: 398 ALHIACCEGHTDIVKYLLL-NGASVHEKDR 426
L A G V+ LL +R
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNR 34
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 54.4 bits (129), Expect = 4e-09
Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 23/208 (11%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEK 291
+ + L KD D R LH + +I +LL +V+ D + T +
Sbjct: 23 KPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGN 82
Query: 292 STEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSA---VMTGDLKRMEEIKGYVSN 348
+ LN T + L + + + + G R+++ +
Sbjct: 83 LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPL 142
Query: 349 IVYEFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQ-----------------GADLSIK 391
+ L L+ L + D G LF GA+ +
Sbjct: 143 HRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV 202
Query: 392 DADQRSALHIACCEGHTDIVKYLLLNGA 419
D A +A + + K+ L N
Sbjct: 203 DNKGAKAEDVAL---NEQVKKFFLNNVV 227
Score = 44.8 bits (104), Expect = 7e-06
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 246 ALHIACCEGHTDIVKYLLL-NGASVHEKDRVQLTVL 280
LH AC E V+ LL + + +KD+ L
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPL 38
Score = 42.9 bits (99), Expect = 3e-05
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 398 ALHIACCEGHTDIVKYLLL-NGASVHEKDR 426
LH AC E V+ LL + + +KD+
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQ 32
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 50.2 bits (118), Expect = 4e-08
Identities = 19/173 (10%), Positives = 46/173 (26%), Gaps = 21/173 (12%)
Query: 242 DQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVG 301
D L A G D V+ L+ NGA + + S +
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 302 AVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTT 361
++ T +++ + G +++ + + +
Sbjct: 61 DARTKVDRTPLHMAASEG---HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVE 117
Query: 362 LISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYL 414
L+ ++ + ++A I+ G+ D+ + L
Sbjct: 118 LLIKYGADVHTQ------------------SKFCKTAFDISIDNGNEDLAEIL 152
Score = 45.2 bits (105), Expect = 2e-06
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYL 262
GAD+ + ++A I+ G+ D+ + L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 39.1 bits (89), Expect = 2e-04
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 394 DQRSALHIACCEGHTDIVKYLLLNGASVH 422
D L A G D V+ L+ NGA
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFT 29
Score = 27.9 bits (60), Expect = 1.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280
GAD++ KD + +ALH A H ++V+ L+ GA VH + + T
Sbjct: 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAF 137
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 51.0 bits (120), Expect = 6e-08
Identities = 26/189 (13%), Positives = 53/189 (28%), Gaps = 13/189 (6%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEK 291
A L+ ++ Q++ LH+A +I + +
Sbjct: 28 DLAFLNFQNNLQQTPLHLAVITNQPEIAEA--------LLGAGCDPELRDFRGNTPLHLA 79
Query: 292 STEGGYDLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVY 351
+G VG + + + L A + G L +E + +++
Sbjct: 80 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA 139
Query: 352 EFSMNPHLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIV 411
+ N T L + + + L GAD++ S + T I
Sbjct: 140 QEPCN-GRTALHLAVDLQNPDLVS----LLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ 194
Query: 412 KYLLLNGAS 420
+ L
Sbjct: 195 QQLGQLTLE 203
Score = 51.0 bits (120), Expect = 6e-08
Identities = 8/39 (20%), Positives = 12/39 (30%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGAS 268
L GAD++ S + T I + L
Sbjct: 165 LKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 44.5 bits (103), Expect = 7e-06
Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 17/189 (8%)
Query: 242 DQRSALHIACCEGHTD----IVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGY 297
D S LH+A +++ + + A ++ ++ +Q T L T
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAV-------ITNQPE 53
Query: 298 DLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNP 357
+ + + + L A + + + ++ +
Sbjct: 54 IAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT 113
Query: 358 HLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLN 417
L + I + L G Q + + R+ALH+A + D+V LL
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQ------EPCNGRTALHLAVDLQNPDLVSLLLKC 167
Query: 418 GASVHEKDR 426
GA V+
Sbjct: 168 GADVNRVTY 176
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 49.5 bits (116), Expect = 2e-07
Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 50/214 (23%)
Query: 233 GADLSIKDADQRSALHIAC---------------------------------CEGHTDIV 259
G +L I + +++ LH+A +
Sbjct: 30 GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCL 89
Query: 260 KYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGYDLVGAVVRLLNLTTEKDKDDLR 319
+ LL + A + + + E L L D D +
Sbjct: 90 RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLL---------LERGADIDAVD 140
Query: 320 SVLFPAMLQSAVMTGDLKRMEEIKGY-VSNIVYEFSMNPHLTTLISNLPQEITQKLDIDG 378
+ L AV L ++ + + + +S + L + + + L
Sbjct: 141 IKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTL---- 196
Query: 379 VPSLFQGADLSIKDADQRSALHIACCEGHTDIVK 412
+ GAD S+K+ + L +A DI++
Sbjct: 197 ---VRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 47.1 bits (110), Expect = 1e-06
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 230 LFQGADLSIKDADQRSALHIACCEGHTDIVK 260
+ GAD S+K+ + L +A DI++
Sbjct: 197 VRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 46.4 bits (108), Expect = 2e-06
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 242 DQRSALHIACCEGHTDIVKYLL----LNGASVHEKDRVQLTVL 280
D + LHIA +G+ V L+ G + + ++ T L
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPL 44
Score = 44.1 bits (102), Expect = 1e-05
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 394 DQRSALHIACCEGHTDIVKYLL----LNGASVHEKDR 426
D + LHIA +G+ V L+ G + +
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN 38
Score = 43.3 bits (100), Expect = 2e-05
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 232 QGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGASVHEKDRVQLTVL 280
GA+++ + SALH A G +V+ L+ +GA K+ T L
Sbjct: 166 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPL 214
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 44.6 bits (104), Expect = 4e-06
Identities = 24/182 (13%), Positives = 38/182 (20%), Gaps = 47/182 (25%)
Query: 241 ADQRSALHIAC---CEGHTDIVKYLLLNGASVHEKDRVQLTVLTNIRGELTSEKSTEGGY 297
AD + LH C + +G + EK + E
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEK--------------IPLANGHEPDE 46
Query: 298 DLVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVSNIVYEFSMNP 357
+ VR D+ L V F + K + E
Sbjct: 47 TALHLAVRS------VDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 100
Query: 358 HLTTLISNLPQEITQKLDIDGVPSLFQGADLSIKDADQRSALHIACCEGHTDIVKYLLLN 417
A + I + + L IA H + L
Sbjct: 101 L------------------------RGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 136
Query: 418 GA 419
+
Sbjct: 137 LS 138
Score = 43.8 bits (102), Expect = 6e-06
Identities = 7/37 (18%), Positives = 12/37 (32%)
Query: 231 FQGADLSIKDADQRSALHIACCEGHTDIVKYLLLNGA 267
A + I + + L IA H + L +
Sbjct: 102 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS 138
Score = 34.2 bits (77), Expect = 0.010
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 223 DIDGVPSLF-QGADLSIK------DADQRSALHIAC---CEGHTDIVKYLLLNGASVHEK 272
DI G+ + G DL+ K +ALH+A IV +L+ N ++ ++
Sbjct: 18 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ 77
Score = 34.2 bits (77), Expect = 0.010
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 10/60 (16%)
Query: 375 DIDGVPSLF-QGADLSIK------DADQRSALHIAC---CEGHTDIVKYLLLNGASVHEK 424
DI G+ + G DL+ K +ALH+A IV +L+ N ++ ++
Sbjct: 18 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ 77
Score = 28.8 bits (63), Expect = 0.72
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 3/35 (8%)
Query: 393 ADQRSALHIAC---CEGHTDIVKYLLLNGASVHEK 424
AD + LH C + +G + EK
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEK 35
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 40.7 bits (93), Expect = 5e-05
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 246 ALHIACCEGHTDIVKYLLLNGA 267
L A G + V+ LL GA
Sbjct: 6 WLATAAARGRVEEVRALLEAGA 27
Score = 40.7 bits (93), Expect = 5e-05
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 398 ALHIACCEGHTDIVKYLLLNGA 419
L A G + V+ LL GA
Sbjct: 6 WLATAAARGRVEEVRALLEAGA 27
Score = 40.3 bits (92), Expect = 7e-05
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 239 KDADQRSALHIACCEGHTDIVKYLL 263
+DA R + +A GH D+ +YL
Sbjct: 98 RDAWGRLPVDLAEELGHRDVARYLR 122
Score = 40.3 bits (92), Expect = 7e-05
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 391 KDADQRSALHIACCEGHTDIVKYLL 415
+DA R + +A GH D+ +YL
Sbjct: 98 RDAWGRLPVDLAEELGHRDVARYLR 122
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 38.9 bits (89), Expect = 2e-04
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 245 SALHIACCEGHTDIVKYLLLNGASVH 270
+ L + EG D+V+ ++
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPS 28
Score = 38.9 bits (89), Expect = 2e-04
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 397 SALHIACCEGHTDIVKYLLLNGASVH 422
+ L + EG D+V+ ++
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPS 28
Score = 38.5 bits (88), Expect = 3e-04
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 230 LFQGADLSIKD-ADQRSA--LHIACCEGHTDIVKYLLLNGASVHEK 272
+ GA + +D ++A EG+T ++L V EK
Sbjct: 87 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY----GVQEK 128
Score = 38.5 bits (88), Expect = 3e-04
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 382 LFQGADLSIKD-ADQRSA--LHIACCEGHTDIVKYLLLNGASVHEK 424
+ GA + +D ++A EG+T ++L V EK
Sbjct: 87 VESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY----GVQEK 128
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 31.8 bits (70), Expect = 0.046
Identities = 5/18 (27%), Positives = 6/18 (33%)
Query: 246 ALHIACCEGHTDIVKYLL 263
A G D VK +
Sbjct: 5 EFMWALKNGDLDEVKDYV 22
Score = 31.8 bits (70), Expect = 0.046
Identities = 5/18 (27%), Positives = 6/18 (33%)
Query: 398 ALHIACCEGHTDIVKYLL 415
A G D VK +
Sbjct: 5 EFMWALKNGDLDEVKDYV 22
Score = 28.3 bits (61), Expect = 0.76
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 238 IKDADQRSALHIACCEGHTDIVKYLL 263
+K D +AL +K LL
Sbjct: 96 VKGPDGLTALEAT----DNQAIKALL 117
Score = 28.3 bits (61), Expect = 0.76
Identities = 7/26 (26%), Positives = 10/26 (38%), Gaps = 4/26 (15%)
Query: 390 IKDADQRSALHIACCEGHTDIVKYLL 415
+K D +AL +K LL
Sbjct: 96 VKGPDGLTALEAT----DNQAIKALL 117
>d1dkia_ d.3.1.1 (A:) Streptococcal pyrogenic exotoxin B
{Streptococcus pyogenes [TaxId: 1314]}
Length = 335
Score = 29.6 bits (66), Expect = 0.76
Identities = 10/48 (20%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 330 AVMTGDLKRMEEIKGYVSNIVYEFSMNPHLTTLISNLPQEITQKLDID 377
+++GD KR EI GY ++ ++ + ++ + + + ++I + +D
Sbjct: 26 VIVSGD-KRSPEILGYSTSGSFDVNGKENIASFMESYVEQIKENKKLD 72
>d1x1ia1 a.102.3.2 (A:26-386) Xanthan lyase {Bacillus sp. gl1
[TaxId: 84635]}
Length = 361
Score = 29.1 bits (65), Expect = 0.95
Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 18/170 (10%)
Query: 46 TSNIYETGKSLTDVGVITGYDMTPESALTKLS----YVLSKSDWTLEKKKTSL------- 94
T +I TG + ++ G KL+ + +
Sbjct: 160 TPSIGLTGAARAWQAIVVGVRAVIVKDAVKLAAARNGLSGTGIFPYATGGDGFYADGSFV 219
Query: 95 --TDVGVITGYDMTPESALTKLSYVLSKSDWTL-EKKKTIMLTNIRGELTSEKSTEGGYD 151
T GY + L Y+LS S W++ + ++ + I G
Sbjct: 220 QHTTFAYTGGYGSSVLETTANLMYLLSGSTWSVSDPNQSNVWQWIYE--AYRPLLYKGAM 277
Query: 152 LVGAVVRLLNLTTEKDKDDLRSVLFPAMLQSAVMTGDLKRMEEIKGYVKR 201
+ R ++ + +D ++ ++++ A K KR
Sbjct: 278 MDMVRGREISRSYAQDHAVGHGIVA-SIVRLAQFAPAPHA-AAFKQIAKR 325
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 28.7 bits (64), Expect = 1.5
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 207 PFALNSSLPQEITQKLDIDGVPSLFQGA---DLSIKDADQR 244
+ SL + K+ G+P +QG + D D R
Sbjct: 561 RIGMIKSLSL-VALKIMSAGIPDFYQGTEIWRYLLTDPDNR 600
Score = 27.2 bits (60), Expect = 4.8
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Query: 373 KLDIDGVPSLFQGA---DLSIKDADQR 396
K+ G+P +QG + D D R
Sbjct: 574 KIMSAGIPDFYQGTEIWRYLLTDPDNR 600
>d1hn0a1 a.102.3.2 (A:235-618) Chondroitin ABC lyase I {Proteus
vulgaris [TaxId: 585]}
Length = 384
Score = 27.3 bits (60), Expect = 3.6
Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 4/107 (3%)
Query: 1 MNGVILQTYGSGNFPSNRADLLELLKSANERGVIIVNCSQCSRGTTSNIYETGKSLTDVG 60
N + Q + + L+ + + I +Q G + G + G
Sbjct: 212 FNTLSRQHLALLLLEPDDQKRINLVNTFSH--YITGALTQVPPGGKDGLRPDGTAWRHEG 269
Query: 61 VITGYDMTPESALTKLSYVLSKSDWTL-EKKKTSLTDVGVITGYDMT 106
GY ++L Y+L + +++ E +L +++ + +
Sbjct: 270 NYPGYSFPAFKNASQLIYLLRDTPFSVGESGWNNLKKA-MVSAWIYS 315
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.368
Gapped
Lambda K H
0.267 0.0504 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,437,621
Number of extensions: 63822
Number of successful extensions: 314
Number of sequences better than 10.0: 1
Number of HSP's gapped: 262
Number of HSP's successfully gapped: 153
Length of query: 426
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 338
Effective length of database: 1,199,356
Effective search space: 405382328
Effective search space used: 405382328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.1 bits)