RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15714
(205 letters)
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 134 bits (337), Expect = 2e-40
Identities = 94/188 (50%), Positives = 130/188 (69%), Gaps = 4/188 (2%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ +K VGDG VGKTCLLI++T NKFP++YVPTVFDNY T+ + + Y + L+DTAGQ
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRS 141
EDY+RLRP+SYP TD FL+CFS+ S SS+EN+ KW PE+ HHCPK P +LVGT+ DLR
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121
Query: 142 ENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAV---- 197
+ TI+K + ++ +K+ R +KA +Y+ECSA +GL VF A+ +A+
Sbjct: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181
Query: 198 KKQDKSCC 205
K+ + C
Sbjct: 182 PKKSRRCV 189
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 129 bits (325), Expect = 8e-39
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-PDTITVDNKTYDVTLWDTAGQE 82
+K+ +GD VGK+CLL+ E+KF ++ T+ ++ T+ ++ K + +WDTAGQE
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y +L + I ++ NI + +H + ++LVG K+D+ +
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETR 122
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
T D QG+ + +++ ++E SAK ++ ++++F + +K
Sbjct: 123 VVTAD-------------QGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 165
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 127 bits (320), Expect = 5e-38
Identities = 91/175 (52%), Positives = 120/175 (68%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
K+ VGDG GKTCLLI +++++FP YVPTVF+NY I VD K ++ LWDTAG ED
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLED 62
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
Y+RLRP+SYP+TD L+CFSI S S ENI KW PE+KH CP VPIILVG K DLR++
Sbjct: 63 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 122
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
T + + + V +G+ M +I A Y+ECSAK +G+ +VF A R+A++
Sbjct: 123 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 177
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 127 bits (319), Expect = 7e-38
Identities = 97/179 (54%), Positives = 128/179 (71%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+A+K VGDG VGKTCLLI++T N FP +Y+PTVFDNY + VD K ++ LWDTAGQ
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRS 141
EDY+RLRP+SYP TD L+CFS+ S +S+EN+ +KWYPE++HHCP PIILVGTK DLR
Sbjct: 64 EDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 123
Query: 142 ENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ TI+K K ++ ++ QG M ++I A +YLECSA GL VF A+R+ +
Sbjct: 124 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 182
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 126 bits (318), Expect = 1e-37
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 18 KSVHKALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-PDTITVDNKTYDVTLW 76
K+ K+ +GD VGKTC+L +E+ F + ++ T+ ++ TI +D K + +W
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 60
Query: 77 DTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTK 136
DTAGQE + + Y +L + I + S++NI + +H V +++G
Sbjct: 61 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGN- 119
Query: 137 ADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSA 196
K + VS +G+K+ +++E SAK N ++ F R
Sbjct: 120 -----------KCDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDI 167
Query: 197 VKKQDK 202
K DK
Sbjct: 168 KAKMDK 173
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 125 bits (314), Expect = 5e-37
Identities = 83/173 (47%), Positives = 120/173 (69%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
LK VGDG VGKTCLL+++ + FP +YVPTVFD+Y ++TV K Y + L+DTAGQED
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
Y+RLRP+SYP TD FL+CFS+ + +S++N+ +W PELK + P VP +L+GT+ DLR +
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSA 196
KT+ + + + QG+K+ ++I A Y+ECSA +GL VF A+ +
Sbjct: 130 KTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAI 182
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 123 bits (310), Expect = 1e-36
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTV-FDNYPDTITVDNKTYDVTLWDTAGQE 82
K+ +G+ VGKTCL+ T+ FP T+ D T+ ++ + + +WDTAGQE
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 65
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y + + +L + I S+ + ++ KV +LVG K DL
Sbjct: 66 RFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAER 125
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ Q + + + YLE SAK ++ ++++F+ + +
Sbjct: 126 REVSQ-------------QRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEA 170
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 123 bits (308), Expect = 3e-36
Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
K+ VGD GKT LL ++ FP +YVPTVF+NY + +D + +++LWDT+G
Sbjct: 3 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
Y+ +RP+SYP++D L+CF I + +++L KW E++ CP ++LVG K+DLR++
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDV 122
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNE-GLDQVFIAAVRSAVKK 199
T+ + VS QG M ++I AA Y+ECSA +E + +F A + V K
Sbjct: 123 STLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 179
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 118 bits (296), Expect = 3e-34
Identities = 38/181 (20%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-PDTITVDNKTYDVTLWDTAGQE 82
K+ +G+ VGK+CLL+ +++ + DY+ T+ ++ T+ +D KT + +WDTAGQE
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y + ++ + + S+ + ++ V +LVG K DL+ +
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDK 126
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQDK 202
K +LE SA + ++ F+ R + +
Sbjct: 127 RVVEYDV-------------AKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQ 173
Query: 203 S 203
Sbjct: 174 Q 174
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 115 bits (288), Expect = 3e-33
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPD-TITVDNKTYDVTLWDTAGQE 82
KV +GD VGK+ LL T N+F + T+ + +I VD KT +WDTAGQE
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
Y R+ Y LL + I +YEN+ H + I+LVG K+DLR
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 124
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQDK 202
+ + + ++E SA + +++ F + + +
Sbjct: 125 RAVPTDE-------------ARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 171
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 114 bits (285), Expect = 8e-33
Identities = 41/181 (22%), Positives = 76/181 (41%), Gaps = 14/181 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYP-DTITVDNKTYDVTLWDTAGQE 82
K +GD VGK+CLL+ T+ +F + T+ + + +D K + +WDTAGQE
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y LL + I ++ ++ S +H + I+L+G K+DL S
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 123
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQDK 202
+ + + ++E SAK +++ FI + +K +
Sbjct: 124 RDVK-------------REEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 170
Query: 203 S 203
Sbjct: 171 G 171
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 113 bits (284), Expect = 1e-32
Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 14/180 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-PDTITVDNKTYDVTLWDTAGQE 82
K +G+ GK+CLL E KF D T+ + I V K + +WDTAGQE
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y LL + I S +Y + + + IIL G K DL ++
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDAD 125
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQDK 202
+ + +LE SA E +++ F+ R + K +
Sbjct: 126 REVTF-------------LEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIES 172
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 113 bits (283), Expect = 1e-32
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 14/172 (8%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDN-YPDTITVDNKTYDVTLWDTAGQE 82
K +GD VGK+CLL TE KF D T+ I V + + +WDTAGQE
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ + Y L+ + I S+Y ++ S P IIL+G KADL ++
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQ 124
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
+ K+ + +LE SAK E ++ F+ A +
Sbjct: 125 RDVT------------YEEAKQFAEENG-LLFLEASAKTGENVEDAFLEAAK 163
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 110 bits (276), Expect = 2e-31
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 14/177 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPD-TITVDNKTYDVTLWDTAGQE 82
K+ +G+ VGKT L + ++ F +V TV ++ TI ++K + +WDTAGQE
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
Y + Y F+L + I + S+ + + ++LVG K D+ E
Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 125
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
+ + E+ E SAK N + Q F V +K
Sbjct: 126 RVVSS-------------ERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 110 bits (275), Expect = 2e-31
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ KV +G G VGK+ L + F Y PT+ D Y I VD+ + + DTAG
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGT 61
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
E + +R + N F+L +S+ + S+++I ++ KVP+ILVG K DL
Sbjct: 62 EQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLE 121
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
SE + +S+G+ + + ++E SAK +D++F VR
Sbjct: 122 SEREVS------------SSEGRALAEEWGCP-FMETSAKSKTMVDELFAEIVR 162
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 109 bits (273), Expect = 6e-31
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 25/192 (13%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-----------PDTITVDNKTYD 72
+K+ +GD VGKT L +T+NKF ++ TV ++ P+ +
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 65
Query: 73 VTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPII 131
+ LWDTAGQE + L + + FLL F + S S+ N+ + + C I+
Sbjct: 66 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 125
Query: 132 LVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIA 191
L+G KADL + + Q +++ K Y E SA + +++
Sbjct: 126 LIGNKADLPDQREVN------------ERQARELADKYG-IPYFETSAATGQNVEKAVET 172
Query: 192 AVRSAVKKQDKS 203
+ +K+ ++
Sbjct: 173 LLDLIMKRMEQC 184
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 105 bits (262), Expect = 1e-29
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITV-DNKTYDVTLWDTAGQED 83
K+ +G+ VGKT L+ + F Y T+ ++ +++T + LWDTAGQE
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 61
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
+ L P ++ ++ + I + +S++ V I+LVG K DL +
Sbjct: 62 FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 121
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
+ + + + K ++E SAK + Q+F
Sbjct: 122 QVSI-------------EEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 159
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 103 bits (256), Expect = 2e-28
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 14/176 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVF-DNYPDTITVDNKTYDVTLWDTAGQE 82
LK+ +G+ VGK+ LL+ T++ F + T+ D TI+VD + +WDTAGQE
Sbjct: 8 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 67
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ L P Y +L + + ++ + + + + ++
Sbjct: 68 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNML--------- 118
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
+ K E V ++G K RK ++E SAK +G+ F V ++
Sbjct: 119 ---VGNKIDKENREVDRNEGLKFARKHS-MLFIEASAKTCDGVQCAFEELVEKIIQ 170
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 102 bits (255), Expect = 2e-28
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ K+ VG G VGK+ L I ++ F +DY PT+ D+Y +VD + + DTAGQ
Sbjct: 5 ETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQ 64
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
E++ +R FLL F+I S+ + + L+ P++LVG KADL
Sbjct: 65 EEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE 124
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
S+ Y E SAKL +D+ F VR+ K Q
Sbjct: 125 SQR-------------QVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQ 171
Query: 201 DK 202
++
Sbjct: 172 EQ 173
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 102 bits (255), Expect = 2e-28
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 15/173 (8%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDT--ITVDNKTYDVTLWDTAGQ 81
KV VGD VGKTCLL+ + F + + VD + +WDTAGQ
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRS 141
E + + Y + LL + + + +S++NI + ++ V ++L+G K D
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 126
Query: 142 ENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
E V G+K+ ++ ++E SAK +D F A +
Sbjct: 127 ERV------------VKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAK 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 101 bits (252), Expect = 7e-28
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNY-PDTITVDNKTYDVTLWDTAGQE 82
KV +GDG VGK+ L+ + NKF T T+ + + VD + +WDTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHC-----PKVPIILVGTKA 137
+ LR Y +DC LL FS+ + S++N+ S W E ++ P +++G K
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNL-SNWKKEFIYYADVKEPESFPFVILGNKI 125
Query: 138 DLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAV 197
D+ + T + + R Y E SAK + F AVR +
Sbjct: 126 DISERQVS-------------TEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 172
Query: 198 K 198
Sbjct: 173 A 173
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 100 bits (248), Expect = 2e-27
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ K+ +G G VGK+ L + + F Y PT+ D+Y + VD + + + DTAG
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGT 61
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
E + +R + N F L +SI + S++ ++ L+ VP+ILVG K DL
Sbjct: 62 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLE 121
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
E QG+ + R+ +LE SAK ++++F VR
Sbjct: 122 DERVV------------GKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVR 163
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 97.4 bits (241), Expect = 2e-26
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 14/175 (8%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTIT-VDNKTYDVTLWDTAGQED 83
K+ +G+ VGK+ L++ + +F T+ + +D+ T +WDTAGQE
Sbjct: 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 67
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
Y L PM Y ++ + I + S+ + + P + I L G KADL ++
Sbjct: 68 YHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKR 127
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
Q + + ++E SAK + ++++F+A + K
Sbjct: 128 AV-------------DFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 95.8 bits (237), Expect = 8e-26
Identities = 43/176 (24%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPD-TITVDNKTYDVTLWDTAGQE 82
KV +G+G VGKT L++ + ENKF ++ T+ ++ + + K ++ +WDTAGQE
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ L P+ Y +++ +L + I S++ + + K ++ + +VG K DL E
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKE 123
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
S + + + A++ SAK N+G++++F+ + ++
Sbjct: 124 RHV------------SIQEAESYAESVG-AKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 95.4 bits (236), Expect = 1e-25
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
K+ VG G VGK+ L I +N F +Y PT+ D+Y + +D +T + + DTAGQE+Y
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEY 64
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH--CPKVPIILVGTKADLRSE 142
+R + FL F+I +T S+E+I ++ ++K VP++LVG K DL +
Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCDLAAR 123
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
S+ + + Y+E SAK +G++ F VR +
Sbjct: 124 TV--------------ESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 95.4 bits (236), Expect = 1e-25
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
KV VG G VGK+ L + ++F DY PT D+Y + +D + + + DTAGQEDY
Sbjct: 6 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 65
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELK--HHCPKVPIILVGTKADLRSE 142
+R + + + FL FSI + + + ++ VP +LVG K+DL +
Sbjct: 66 AAIRDNYFRSGEGFLCVFSI-TEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDK 124
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
+ + + K R Y+E SAK +D+VF +R +
Sbjct: 125 RQV-------------SVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 95.1 bits (235), Expect = 2e-25
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 17/183 (9%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPT--VFDNYPDTITVDNKTYDVTLWDTAGQ 81
LKV +GD VGKT L+ + +K+ Y T + +K + +WDTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKH----HCPKVPIILVGTKA 137
E ++ L Y DC +L + + + SS+ENI S L H P +++G K
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 138 DLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAV 197
D K + +K +++ + + SAK +D F RSA+
Sbjct: 123 DAEESKKIVSEK-----------SAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 171
Query: 198 KKQ 200
++
Sbjct: 172 QQN 174
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 94.0 bits (232), Expect = 5e-25
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDN-KTYDVTLWDTAGQE 82
+K+ +G+ VGK+ +++ N F + PT+ + N T +WDTAGQE
Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSE 142
+ L PM Y N L+ + + S+ + + I LVG K D+ E
Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
+ + + K + E SAK E ++ VF+ K
Sbjct: 124 GGERKV----------AREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLK 170
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 93.6 bits (231), Expect = 8e-25
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 18/184 (9%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFD-NYPDTITVDNKTYDVTLWDTAGQE 82
LKV +GD VGKT L+ + KF Y T+ + VD++ + +WDTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCP----KVPIILVGTKAD 138
++ L Y DC +L F + + ++++ + S L P P +++G K D
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 139 LRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
L + + + Y E SAK ++Q F R+A+K
Sbjct: 123 LENRQVATK-------------RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 169
Query: 199 KQDK 202
++ +
Sbjct: 170 QETE 173
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 91.3 bits (225), Expect = 6e-24
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
++ VG G VGK+ L I ++ F TDY PT+ D+Y +D++ + + DTAGQE++
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEF 66
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELK-HHCPKVPIILVGTKADLRSEN 143
+R + FLL FS+ S+E I L+ + P+IL+G KADL +
Sbjct: 67 GAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQR 126
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQD 201
+ ++ + + Y+E SAK+ +DQ F VR K Q+
Sbjct: 127 QVTQEE-------------GQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQE 171
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 90.5 bits (223), Expect = 1e-23
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 14/174 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTV-FDNYPDTITVDNKTYDVTLWDTAG 80
+ LKV +GD VGK+ ++ E+ F + PT+ T+ N+ + +WDTAG
Sbjct: 3 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 62
Query: 81 QEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLR 140
E + L PM Y + ++ + I ++ + + +H P + + + G K DL
Sbjct: 63 LERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLT 122
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
+ +++ K I A ++E SAK ++++FI R
Sbjct: 123 DVREVMER------------DAKDYADSIH-AIFVETSAKNAININELFIEISR 163
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 89.3 bits (220), Expect = 3e-23
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
+V G G VGK+ L++ + F Y+PTV D Y I+ D + + DT G +
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 63
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWY--PELKHHCPKVPIILVGTKADLRSE 142
++ +S F+L +SI S S E + + E+K +PI+LVG K D
Sbjct: 64 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPS 123
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ +S+ + + R K A ++E SAKLN + ++F + ++
Sbjct: 124 REV------------QSSEAEALARTWKCA-FMETSAKLNHNVKELFQELLNLEKRRT 168
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 85.9 bits (211), Expect = 7e-22
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
K+ VGDG VGK+ L I + F DY PT+ D+Y +DN+ + + DTAGQE++
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLRSEN 143
+R D FL+ +S+ +S+E++ L+ P+ILV K DL
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLR 125
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAK-LNEGLDQVFIAAVRSAVKK 199
K V+ QGK+M K Y+E SAK +D+ F VR ++
Sbjct: 126 K------------VTRDQGKEMATKYNIP-YIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 82.4 bits (202), Expect = 1e-20
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTV-FDNYPDTITVDNKTYDVTLWDTAGQED 83
K+ VGDG GKT + H +F YV T+ + +P + +WDTAGQE
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 64
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
+ LR Y C ++ F + S +Y+N+ W+ +L C +PI+L G K D++
Sbjct: 65 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNV-PNWHRDLVRVCENIPIVLCGNKVDIKDRK 123
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
+ + K +Y + SAK N ++ F+ R +
Sbjct: 124 ---------------VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGD 164
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 81.3 bits (199), Expect = 3e-20
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 23 ALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYP-DTITVDNKTYDVTLWDTAGQ 81
A+K+ VG+G VGK+ ++ + + F DY T+ ++ I V+++ + LWDTAGQ
Sbjct: 2 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 61
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRS 141
E+++ + Y +L FS S+E I S W ++ +P LV K DL
Sbjct: 62 EEFDAITKAYYRGAQACVLVFSTTDRESFEAI-SSWREKVVAEVGDIPTALVQNKIDLL- 119
Query: 142 ENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
+ + + + + +++K + S K + + +VF ++
Sbjct: 120 -----------DDSCIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 80.5 bits (197), Expect = 8e-20
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYP-DTITVDNKTYDVTLWDTAG 80
+ K+ +GD VGKTCL +FP T+ ++ + +D + + LWDTAG
Sbjct: 1 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 60
Query: 81 QEDYERLRPMSY-PNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKAD 138
QE + + Y N + + + + +S+ ++ + +H +P ILVG K D
Sbjct: 61 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCD 120
Query: 139 LRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAK---LNEGLDQVF 189
LRS + T +K E SAK N+ ++ +F
Sbjct: 121 LRSAIQVP------------TDLAQKFADTHSMP-LFETSAKNPNDNDHVEAIF 161
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 79.3 bits (194), Expect = 2e-19
Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 19/183 (10%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
L++ +GD GK+ L+ + T + Y + VD +T+ V + + AG D
Sbjct: 6 LRLGVLGDARSGKSSLIHRFLTGSYQ-VLEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 64
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCP---KVPIILVGTKADLR 140
D + FS+ +S++ + + + LVGT+ +
Sbjct: 65 A-----KFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRIS 119
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ + + ++ + + +K Y E A +D+VF + V +
Sbjct: 120 ASSPRVV----------GDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLR 169
Query: 201 DKS 203
+
Sbjct: 170 KQQ 172
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 78.6 bits (192), Expect = 4e-19
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
K+ K+ +G VGK+ L I E +F Y PT+ + + ITV+ + Y + L DTAGQ
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQ 62
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
++Y + + ++L +S+ S S+E I L ++PI+LVG K DL
Sbjct: 63 DEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLH 122
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVK 198
E + +GK + AA +LE SAK N+ VF + A K
Sbjct: 123 MERVISYE------------EGKALAESWNAA-FLESSAKENQTAVDVFRRIILEAEK 167
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 77.8 bits (190), Expect = 6e-19
Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 13/166 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
+++ VG GKT +L + T F+ TV+ K T+WD GQ+
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVE----TVEYKNISFTVWDVGGQDK 56
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
L + NT + + L + ++LV
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 116
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
+ ++ G R A +GL +
Sbjct: 117 MNAAE--------ITDKLGLHSLRHRN-WYIQATCATSGDGLYEGL 153
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 77.4 bits (189), Expect = 1e-18
Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
+K+ G VGK+ L++ +F +Y PT+ Y T+D++ + + DTAGQED
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED 62
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
+ L+ S E + K + V +ILVG KADL
Sbjct: 63 TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSR 122
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEG-LDQVFIAAVRSAVKKQ 200
+ ST +G+K+ ++ A + ECSA EG + ++F R +++
Sbjct: 123 QV------------STEEGEKLATELACA-FYECSACTGEGNITEIFYELCREVRRRR 167
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 75.8 bits (185), Expect = 6e-18
Identities = 27/180 (15%), Positives = 55/180 (30%), Gaps = 15/180 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
K L++ +G GKT +L + T F+ T+ K + +WD GQ
Sbjct: 16 KELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVE----TLSYKNLKLNVWDLGGQ 71
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
Y +T + + + L+ +++ K D
Sbjct: 72 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQP 131
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ K + + K ++ + SA EG+ + + ++Q
Sbjct: 132 GALSASEVSKELNLVEL----------KDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQ 181
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 75.1 bits (183), Expect = 1e-17
Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 7/171 (4%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
K K+ +G GKT LL +++ +P + + T +D G
Sbjct: 12 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPT----LHPTSEELTIAGMTFTTFDLGGH 67
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHC-PKVPIILVGTKADLR 140
R+ P + + + + VPI+++G K D
Sbjct: 68 IQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRP 127
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAA--EYLECSAKLNEGLDQVF 189
++ + +T +G +++ A E CS +G + F
Sbjct: 128 EAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGF 178
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 73.1 bits (178), Expect = 4e-17
Identities = 27/169 (15%), Positives = 47/169 (27%), Gaps = 15/169 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
K +++ +G GKT +L + T F+ TV K +WD GQ
Sbjct: 11 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVE----TVTYKNVKFNVWDVGGQ 66
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
+ L Y T + + + + + I++ K
Sbjct: 67 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANK---- 122
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
D A + + G R A +GL +
Sbjct: 123 -----QDLPDAMKPHEIQEKLGLTRIRDRN-WYVQPSCATSGDGLYEGL 165
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 72.7 bits (177), Expect = 8e-17
Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 15/173 (8%)
Query: 18 KSVHKALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWD 77
+ + +++ +G GKT LL + +V ++ + + +WD
Sbjct: 11 SAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQ----GFNIKSVQSQGFKLNVWD 66
Query: 78 TAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTK 136
GQ + NTD + +E + L+ VP+++ K
Sbjct: 67 IGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANK 126
Query: 137 ADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
DL + + + + + + + + CSA EG+
Sbjct: 127 QDLLTAAPASEIAEGLNLHTI----------RDRVWQIQSCSALTGEGVQDGM 169
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 71.3 bits (173), Expect = 2e-16
Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 14/174 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ +++T VG GKT + +F D +PTV N + + LWD GQ
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGGQ 57
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPK-VPIILVGTKADLR 140
+ + + E ++ + L + +P++++G K DL
Sbjct: 58 PRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP 117
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
+ + + + + + S K + +D ++
Sbjct: 118 GALDEKELIEKMNLSAI----------QDREICCYSISCKEKDNIDITLQWLIQ 161
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 71.2 bits (173), Expect = 3e-16
Identities = 30/169 (17%), Positives = 51/169 (30%), Gaps = 15/169 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ KV VG GKT +L + N+ + + +WD GQ
Sbjct: 14 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVE----EIVINNTRFLMWDIGGQ 69
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCP-KVPIILVGTKADLR 140
E Y NT+ ++ + Y L H K +++ K D++
Sbjct: 70 ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 129
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
+ + ++ + K C A EGL Q
Sbjct: 130 ECMTVAEISQFLKLTSI----------KDHQWHIQACCALTGEGLCQGL 168
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 69.0 bits (167), Expect = 1e-15
Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 8/166 (4%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
K+ +G GKT LL ++ T PT + T +D G
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTS---EELAIGNIKFTTFDLGGHIQA 57
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKH-HCPKVPIILVGTKADLRSEN 143
RL +P + + ++ + VP +++G K D +
Sbjct: 58 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 117
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
+ + A + + SQ + +R + E CS + G + F
Sbjct: 118 SEAELRSALGLLNTTGSQRIEGQRPV---EVFMCSVVMRNGYLEAF 160
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 67.9 bits (164), Expect = 5e-15
Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 17/181 (9%)
Query: 25 KVTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQE 82
+V +G+ VGK+ L + +D D Y T+ VD ++ + L D +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 64
Query: 83 DYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPE--LKHHCPKVPIILVGTKADLR 140
L + + S+ + +PIILVG K+DL
Sbjct: 65 GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLV 124
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ + + + +++E SA + + ++F VR ++
Sbjct: 125 RCREV-------------SVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRR 171
Query: 201 D 201
D
Sbjct: 172 D 172
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 67.0 bits (162), Expect = 9e-15
Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 15/179 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ L++ +G GKT +L T PT+ N T++++ + + +WD GQ
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGEDVDT-ISPTLGFNI---KTLEHRGFKLNIWDVGGQ 56
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKH-HCPKVPIILVGTKADLR 140
+ + +TD + ++ + L +++ K DL
Sbjct: 57 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLP 116
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKK 199
++A E+ + CSA E L + +
Sbjct: 117 GALSCNAIQEALEL----------DSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 165
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 64.3 bits (155), Expect = 8e-14
Identities = 30/180 (16%), Positives = 58/180 (32%), Gaps = 15/180 (8%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ +++ +G GKT +L + T T+ + TV K +WD G
Sbjct: 4 REMRILILGLDGAGKTTILYRLQVGEVVT----TIPTIGFNVETVTYKNLKFQVWDLGGL 59
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHH-CPKVPIILVGTKADLR 140
Y NTD + S+ L+ K +++ K D+
Sbjct: 60 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 119
Query: 141 SENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQ 200
+ + + + + K + + + SA GLD+ V + +Q
Sbjct: 120 QAMTSSEMANSLGLPAL----------KDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 169
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 64.0 bits (154), Expect = 1e-13
Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 15/179 (8%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
KV +G VGK+ L + Y +I VD + + ++D Q+
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGG 61
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPK-VPIILVGTKADLRSEN 143
L D +++ +S+ S+E + VPIILVG K+DL
Sbjct: 62 RWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRSR 121
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQDK 202
+ +G+ ++E SA L+ + +F VR ++D
Sbjct: 122 EVS------------VDEGRACAVVFDCK-FIETSAALHHNVQALFEGVVRQIRLRRDS 167
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 61.9 bits (149), Expect = 1e-12
Identities = 22/203 (10%), Positives = 48/203 (23%), Gaps = 33/203 (16%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ +K+ +G G GK+ ++ + K ++D GQ
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKIIHEAGTGIV--------ETHFTFKDLHFKMFDVGGQ 52
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENI----------LSKWYPELKHHCPKVPII 131
+ + + C ++ + + + I
Sbjct: 53 RSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSI 112
Query: 132 LVGTKADLRSENKTIDKKKA--------------AEVDLVSTSQGKKMRRKIKAAEYLEC 177
++ E K A + + R+ K
Sbjct: 113 ILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFT 172
Query: 178 SAKLNEGLDQVFIAAVRSAVKKQ 200
A + + VF AV + K
Sbjct: 173 CATDTKNVQFVF-DAVTDVIIKN 194
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 58.8 bits (141), Expect = 1e-11
Identities = 29/203 (14%), Positives = 56/203 (27%), Gaps = 30/203 (14%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ LK+ +G G GK+ + VPT D ++ + D GQ
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTG---IIEYPFDLQSVIFRMVDVGGQ 55
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENI----------LSKWYPELKHHC-PKVPI 130
R + N + ++ + + + + +
Sbjct: 56 RSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSV 115
Query: 131 ILVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYL-------------EC 177
IL K DL E + + + R+ ++
Sbjct: 116 ILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFT 175
Query: 178 SAKLNEGLDQVFIAAVRSAVKKQ 200
A E + VF AAV+ + +
Sbjct: 176 CATDTENIRFVF-AAVKDTILQL 197
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 52.3 bits (124), Expect = 3e-09
Identities = 28/195 (14%), Positives = 57/195 (29%), Gaps = 30/195 (15%)
Query: 25 KVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDY 84
V VG GKT L + ++ D ++ D+ +N+ +TL D G E
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQY-RDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 85 ERLRPMSY-PNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKV----PIILVGTKADL 139
+ + + + ++++ ++ + +++ K D+
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDI 120
Query: 140 RSENKTIDKKKAAEVDL---VSTSQGKKMRRKIKA---------------------AEYL 175
++ E +L T + E+L
Sbjct: 121 AMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFL 180
Query: 176 ECSAKLNEGLDQVFI 190
ECSAK G
Sbjct: 181 ECSAKGGRGDTGSAD 195
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 47.2 bits (111), Expect = 2e-07
Identities = 30/202 (14%), Positives = 53/202 (26%), Gaps = 32/202 (15%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
+K+ +G G GK+ L + PT + + K + D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQM---RIIHGQDPTKGIH---EYDFEIKNVPFKMVDVGGQRS 56
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHC-----------PKVPIIL 132
+ + + L S + + V IIL
Sbjct: 57 ERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIIL 116
Query: 133 VGTKADLRSENKTIDKKKAAEVDLVSTSQG---------KKMRRKIKAAEYLEC-----S 178
K DL E + K ++ + R K + + +
Sbjct: 117 FLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTT 176
Query: 179 AKLNEGLDQVFIAAVRSAVKKQ 200
A E + VF V+ +
Sbjct: 177 AINTENIRLVF-RDVKDTILHD 197
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 46.7 bits (110), Expect = 4e-07
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 18/132 (13%)
Query: 22 KALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
++ +G G GK+ ++ V T + ++D GQ
Sbjct: 5 ATHRLLLLGAGESGKSTIVKQMRILHV----VLTS---GIFETKFQVDKVNFHMFDVGGQ 57
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSY------ENILSKWYPELKHHC-----PKVPI 130
D R + + + + S + N L + K + +
Sbjct: 58 RDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISV 117
Query: 131 ILVGTKADLRSE 142
IL K DL +E
Sbjct: 118 ILFLNKQDLLAE 129
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 40.5 bits (93), Expect = 3e-05
Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 10/157 (6%)
Query: 24 LKVTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDN-----YPDTITVDNKTYDVTLW 76
+KV G GK+ LL + E TD T D + D + +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 77 DTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTK 136
+ E R +L G+T+ + W + K+PI +V K
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 137 ADLRSENKTIDKKKAAEVDLVSTSQGK---KMRRKIK 170
AD+ E + + + +S G+ +R +K
Sbjct: 122 ADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLK 158
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 40.8 bits (94), Expect = 4e-05
Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 9/168 (5%)
Query: 26 VTTVGDGMVGKTCLLITHTENKF----PTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQ 81
+ G GKT LL T + + + D +T+ + V L
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGSGVTLVDFPGHVKLRYKLSD 65
Query: 82 EDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRS 141
R + + T++ E ++ + I++ K++L +
Sbjct: 66 YLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFT 125
Query: 142 ENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
K A E ++ K + R+ K+ +E + +
Sbjct: 126 ARPPSKIKDALESEI-----QKVIERRKKSLNEVERKINEEDYAENTL 168
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 39.8 bits (92), Expect = 1e-04
Identities = 27/171 (15%), Positives = 47/171 (27%), Gaps = 20/171 (11%)
Query: 13 KDVKSKSVHKALKVTTVGDGMVGKTCLL-----ITHTENKF-PTDYVPTVFDNYPDTITV 66
D + L V G+ GK+ + I + E T V + +P
Sbjct: 46 SDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPN 105
Query: 67 DNKTYDVTLWDTAGQEDY-----ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPEL 121
V WD G L M + D F++ + + +I +
Sbjct: 106 IPN---VVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAK----AI 158
Query: 122 KHHCPKVPIILVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAA 172
K V TK D N+ + + + + V +
Sbjct: 159 SMM--KKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFREN 207
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 37.4 bits (85), Expect = 5e-04
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 4/172 (2%)
Query: 20 VHKALKVTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWD 77
+ A+KV VG VGK+ L I + E + T D D + +D + Y D
Sbjct: 5 ITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VD 62
Query: 78 TAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKA 137
TAG R+ P + + + SI +L + ++ +A
Sbjct: 63 TAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRA 122
Query: 138 DLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
+ NK + T ++ I + + SA +D++
Sbjct: 123 SVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMI 174
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 36.6 bits (83), Expect = 8e-04
Identities = 22/192 (11%), Positives = 51/192 (26%), Gaps = 27/192 (14%)
Query: 26 VTTVGDGMVGKTCLLITHTENKFPTDYVPTV----------FDNYPDTITVDNKTYDVTL 75
+ G VGK+ L+ T K P V D
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 76 WDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENI-----LSKWYPELKHHCPK--V 128
+++ + N D +L + E + +
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 129 PIILVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQV 188
P I+ K D + + A + ++ ++ SAK + ++++
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLA---------EKFEVPLSEIDKVFIPISAKFGDNIERL 173
Query: 189 FIAAVRSAVKKQ 200
+ ++++
Sbjct: 174 -KNRIFEVIRER 184
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 34.3 bits (77), Expect = 0.005
Identities = 19/189 (10%), Positives = 51/189 (26%), Gaps = 24/189 (12%)
Query: 21 HKALKVTTVGDGMVGKTCLL----------ITHTENKFPTDYVPTVFDNYPDTITVDNKT 70
++ G VGK+ + T ++ + ++ + V
Sbjct: 21 GGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYG 80
Query: 71 YDVTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPI 130
+ ++ ++ + +P+
Sbjct: 81 FAKVSKSEREAWGRMIETYITTREELKAVVQIVD---LRHAPSNDDVQMYEFLKYYGIPV 137
Query: 131 ILVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFI 190
I++ TKAD + K K ++ E + S++ +G D+
Sbjct: 138 IVIATKADKIPKGKWDKHAKVV----------RQTLNIDPEDELILFSSETKKGKDEA-W 186
Query: 191 AAVRSAVKK 199
A++ + +
Sbjct: 187 GAIKKMINR 195
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 33.9 bits (76), Expect = 0.007
Identities = 21/166 (12%), Positives = 42/166 (25%), Gaps = 13/166 (7%)
Query: 26 VTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
V VG VGK+ LL + + + T +T +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQ-----IVFVDTPG 62
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
+ D + + + + P + + + K +
Sbjct: 63 LHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVG 122
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
+D K E + K + AE SA + ++
Sbjct: 123 NKLDAAKYPEEAM------KAYHELLPEAEPRMLSALDERQVAELK 162
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 33.2 bits (74), Expect = 0.011
Identities = 20/175 (11%), Positives = 43/175 (24%), Gaps = 18/175 (10%)
Query: 22 KALKVTTVGDGMVGKTCLL--------ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDV 73
++V G GK+ L + T + +F+ VD Y
Sbjct: 15 TGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGY 74
Query: 74 TLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILV 133
+ ++R + L + E ++L+
Sbjct: 75 AEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLL 134
Query: 134 GTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQV 188
L S + E + + S+ +G+D++
Sbjct: 135 TKADKLASGARKAQLNMVRE----------AVLAFNGDVQVETFSSLKKQGVDKL 179
>d1euea_ d.120.1.1 (A:) Cytochrome b5 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 86
Score = 30.7 bits (69), Expect = 0.026
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 64 ITVDNKTYDVTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWY 118
+ + + YD+T + + E L + D IG + +L ++Y
Sbjct: 23 MVIHGRVYDITRFLSEHPGGEEIL--LEQAGADATESFEDIGHSPDAREMLKQYY 75
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 30.5 bits (68), Expect = 0.094
Identities = 11/87 (12%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 85 ERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPII--LVGTKADLRSE 142
R P++ I + + + + ++ ++G K L
Sbjct: 158 SRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPL 217
Query: 143 NKTIDKKKAAEVDLVSTSQGKKMRRKI 169
+ + + +V QG+ MR +
Sbjct: 218 KEELRIQGVPKVTYTEFCQGRTMRWAL 244
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 30.0 bits (66), Expect = 0.15
Identities = 32/185 (17%), Positives = 54/185 (29%), Gaps = 30/185 (16%)
Query: 26 VTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAG--- 80
V VG GK+ LL +T K T+ N + + TL D G
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEER--FTLADIPGIIE 61
Query: 81 ------QEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVG 134
E LR ++ ++L + + E + + + ++
Sbjct: 62 GASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLV-AL 120
Query: 135 TKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVR 194
K DL E A + + L SA GL + A+
Sbjct: 121 NKVDLLEEEAVKALADALAREGL---------------AVLPVSALTGAGLPAL-KEALH 164
Query: 195 SAVKK 199
+ V+
Sbjct: 165 ALVRS 169
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 29.0 bits (64), Expect = 0.32
Identities = 13/139 (9%), Positives = 37/139 (26%), Gaps = 12/139 (8%)
Query: 22 KALKVTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKT--------- 70
+L + +G G VGK+ + I + + + + T
Sbjct: 31 NSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGL 90
Query: 71 YDVTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPI 130
+ + + + ++ + + +++K +
Sbjct: 91 IEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKA 150
Query: 131 ILVGTKAD-LRSENKTIDK 148
I+ T A + D+
Sbjct: 151 IVALTHAQFSPPDGLPYDE 169
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 28.4 bits (62), Expect = 0.40
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 24 LKVTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAG 80
L++ VG VGK+ LL + + + TD T D + I + + DTAG
Sbjct: 1 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAG 57
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 28.2 bits (61), Expect = 0.52
Identities = 20/178 (11%), Positives = 47/178 (26%), Gaps = 15/178 (8%)
Query: 26 VTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
V VG VGK+ L + + D D +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQ------DTVEWYGKTFKLVDTC 56
Query: 84 YERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSEN 143
P + + ++ + + + + L + D
Sbjct: 57 GVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVA 116
Query: 144 KTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRSAVKKQD 201
+ + E ++ K + E + SA+ N LD + + + ++++
Sbjct: 117 NKAENLREFEREV------KPELYSLGFGEPIPVSAEHNINLDTM-LETIIKKLEEKG 167
>d2j07a1 a.99.1.1 (A:172-405) C-terminal domain of DNA photolyase
{Thermus thermophilus [TaxId: 274]}
Length = 234
Score = 27.2 bits (59), Expect = 1.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 116 KWYPELKHHCPKVPII 131
+W PE + PK P++
Sbjct: 215 RWAPEYPSYAPKDPVV 230
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 26.9 bits (58), Expect = 1.5
Identities = 30/163 (18%), Positives = 44/163 (26%), Gaps = 21/163 (12%)
Query: 48 FPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQEDYERLRP-----MSYPNTDCFLLCF 102
D + F+ Y + I K D L DT GQ + M +
Sbjct: 72 ESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYIS 131
Query: 103 SIGSTSSYENILSKWYPELKHHCP-KVPIILVGTKADLRSENKTIDKKK--------AAE 153
+ + L I K DL SE + +K A
Sbjct: 132 DPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTAR 191
Query: 154 VDLVSTSQGKKMRRKIKAAE-------YLECSAKLNEGLDQVF 189
+ L + QG + L SAK EG + +
Sbjct: 192 LKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLE 234
>d1s3aa1 c.47.1.22 (A:15-99) NADH-ubiquinone oxidoreductase b8
subunit, CI-B8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 25.8 bits (57), Expect = 1.5
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 98 FLLCFSIGSTSSYENILSKWYPELKHHCPKVPII 131
LC + + + K Y ELK P +PI+
Sbjct: 7 IHLCQRSPGSQGVRDFIEKRYVELKKANPDLPIL 40
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 27.0 bits (58), Expect = 1.5
Identities = 22/172 (12%), Positives = 53/172 (30%), Gaps = 24/172 (13%)
Query: 26 VTTVGDGMVGKTCLL--ITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTAGQED 83
+ VG VGK+ LL + + T + I + + + +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLG-QKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHME 66
Query: 84 YERL------RPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKA 137
+R + S D L+ F + T + + P + +
Sbjct: 67 EKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAV------ 120
Query: 138 DLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVF 189
NK + ++ A++ + + ++ + + SA+ +D +
Sbjct: 121 -----NKVDNVQEKADLL----PHLQFLASQMNFLDIVPISAETGLNVDTIA 163
>d1soxa2 d.120.1.1 (A:3-93) Sulfite oxidase, N-terminal domain
{Chicken (Gallus gallus) [TaxId: 9031]}
Length = 91
Score = 25.3 bits (55), Expect = 2.4
Identities = 6/55 (10%), Positives = 20/55 (36%)
Query: 64 ITVDNKTYDVTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWY 118
+T +DVT + +++ + + F +++ +L ++
Sbjct: 22 VTHGTDVFDVTDFVELHPGGPDKILLAAGGALEPFWALYAVHGEPHVLELLQQYK 76
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 26.2 bits (57), Expect = 2.7
Identities = 16/102 (15%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 94 NTDCFLLCFSIGSTSSYENILSKWYPELKHHCPKVPIILVGTKADLRSENKTIDKKKAAE 153
N D +L ++ + I+ K+ + ++ ++V K DL E+ D +K E
Sbjct: 10 NVDQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDLYDED---DLRKVRE 64
Query: 154 VDLVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRS 195
++ + + ++ K +E + +G
Sbjct: 65 LEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGV 106
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 25.8 bits (56), Expect = 3.6
Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 21/127 (16%)
Query: 64 ITVDNKTYDV-------TLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGS---TSSYENI 113
IT++ + D G DY + D +L + + E++
Sbjct: 52 ITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMPQTREHL 111
Query: 114 LSKWYPELKHHCPKVPIILVGTKADLRSENKTIDKKKAAEVDLVSTSQGKKMRRKIKAAE 173
L L +++ KAD +++ ++ + +L+ + K +
Sbjct: 112 L------LARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELL-----TEFGYKGEETP 160
Query: 174 YLECSAK 180
+ SA
Sbjct: 161 IIVGSAL 167
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 25.1 bits (54), Expect = 4.5
Identities = 25/141 (17%), Positives = 40/141 (28%), Gaps = 41/141 (29%)
Query: 25 KVTTVGDGMVGKTC--LLIT------------------------HTENKFPTDYVPTVFD 58
K+ VG GM+G L++ HT ++ + +
Sbjct: 5 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN 64
Query: 59 NYPDTITVDNKTYDVTLWDTAGQEDYERLRPMSYPNTDCFLLCFSIGSTSSYENILSKWY 118
Y D D G+ D E R P I+ +
Sbjct: 65 TYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPL---------------NNKIMIEIG 109
Query: 119 PELKHHCPKVPIILVGTKADL 139
+K +CP II+V D+
Sbjct: 110 GHIKKNCPNAFIIVVTNPVDV 130
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 159
Score = 25.4 bits (55), Expect = 4.6
Identities = 19/132 (14%), Positives = 34/132 (25%), Gaps = 28/132 (21%)
Query: 25 KVTTVGDGMVGKTC-------------LLITHTENKFPTDYVPTVFDNYPDTITVDNKTY 71
K+T VG G VG C L+ +K + + +
Sbjct: 21 KITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEA-----LDLQHGSLFLSTPK 75
Query: 72 DV--TLWDTAGQEDYERL--RPMSYPNTDCFLLCFSIGSTSSYENILSKWYPELKHHCPK 127
V ++ + + L I+ P + + P
Sbjct: 76 IVFGKDYNVSANSKLVIITAGARMVSGQTRLDLL------QRNVAIMKAIVPGVIQNSPD 129
Query: 128 VPIILVGTKADL 139
II+V D+
Sbjct: 130 CKIIVVTNPVDI 141
>d1dqua_ c.1.12.7 (A:) Isocitrate lyase {Aspergillus nidulans
[TaxId: 162425]}
Length = 519
Score = 25.7 bits (56), Expect = 4.9
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 10/57 (17%)
Query: 142 ENKTIDKKKAAEVD---LVSTSQGKKMRRKIKAAEYLECSAKLNEGLDQVFIAAVRS 195
E++ KK + LV S+ ++ A + G D + IA S
Sbjct: 196 EDQAPGTKKCGHMAGKVLVPISE---HINRLVAI----RAQADIMGTDLLAIARTDS 245
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium
vibrioforme [TaxId: 1098]}
Length = 142
Score = 25.0 bits (54), Expect = 5.1
Identities = 21/127 (16%), Positives = 36/127 (28%), Gaps = 17/127 (13%)
Query: 24 LKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTA---G 80
+K+T +G G VG T + + V + P +D G
Sbjct: 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60
Query: 81 QEDYERLRPMSYPNTDCFLLCFSIGST---------SSYENILSKWYPELKHHCPKVPII 131
DY N+D ++ + I+ + + H II
Sbjct: 61 SNDYADTA-----NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115
Query: 132 LVGTKAD 138
+V D
Sbjct: 116 VVSNPLD 122
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma
gondii [TaxId: 5811]}
Length = 154
Score = 25.0 bits (54), Expect = 5.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 22 KALKVTTVGDGMVGKTCLLI 41
+ KV +G GM+G T +
Sbjct: 6 RRKKVAMIGSGMIGGTMGYL 25
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 24.6 bits (53), Expect = 6.0
Identities = 14/132 (10%), Positives = 32/132 (24%), Gaps = 20/132 (15%)
Query: 21 HKALKVTTVGDGMVGKTCLLITHTENKFPTDYVPTVFDNYPDTITVDNKTYDVTLWDTA- 79
+ +V +G G VG + + + + ++ +D V
Sbjct: 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVD 63
Query: 80 -GQEDYERLRPMSYPNTDCFLLCFSIGSTSSYE-----------NILSKWYPELKHHCPK 127
DY+ R L+ G+ I + +
Sbjct: 64 IWHGDYDDCRD-------ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQ 116
Query: 128 VPIILVGTKADL 139
++ D+
Sbjct: 117 GLFLVATNPVDI 128
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 142
Score = 24.6 bits (53), Expect = 6.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 24 LKVTTVGDGMVGKTCLL 40
+K+ VG G VG T
Sbjct: 1 MKLGFVGAGRVGSTSAF 17
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 24.6 bits (53), Expect = 7.1
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 KVTTVGDGMVGKTCLL 40
K++ +G G VG T
Sbjct: 3 KISIIGAGFVGSTTAH 18
>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde
dehydrogenase {Vibrio cholerae [TaxId: 666]}
Length = 147
Score = 24.6 bits (53), Expect = 7.5
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 24 LKVTTVG-DGMVGKTCLLITHTENKFPTDYV 53
++V VG GMVG + E F
Sbjct: 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEP 31
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 24.2 bits (52), Expect = 9.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 KVTTVGDGMVGKTCLL 40
K+T VG G VG C +
Sbjct: 22 KITVVGVGQVGMACAI 37
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.131 0.387
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 724,810
Number of extensions: 32254
Number of successful extensions: 275
Number of sequences better than 10.0: 1
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 97
Length of query: 205
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 124
Effective length of database: 1,295,466
Effective search space: 160637784
Effective search space used: 160637784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.1 bits)