RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1572
(74 letters)
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.6 bits (71), Expect = 0.013
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 26/63 (41%)
Query: 33 ALVQLATYPVAVCHGQGKTQQE-----------------AKTVAA--------HNAIEYL 67
++QLA Y V G T E A +A + + +
Sbjct: 242 GVIQLAHY-VVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAI 300
Query: 68 RLM 70
++
Sbjct: 301 TVL 303
Score = 30.8 bits (69), Expect = 0.024
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 26 HSTGQFQALVQLATY-----PVAVCHGQGKTQQEA 55
HS G++ AL LA V V +G T Q A
Sbjct: 1762 HSLGEYAALASLADVMSIESLVEVVFYRGMTMQVA 1796
Score = 26.9 bits (59), Expect = 0.52
Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 8/60 (13%)
Query: 13 LISTNGSNSIAFLHSTGQFQALVQL-----ATYPVAVCHGQGKTQQEAKTVAAHNAIEYL 67
L ++GS L T F QL P +G + T A ++L
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPT---EGFAADDEPTTPAELVGKFL 65
>3c4b_A Endoribonuclease dicer; RNAse, dsRNA binding protein, ATP-binding,
endonuclease, HEL hydrolase, nucleotide-binding,
phosphoprotein, RN binding; HET: MSE; 1.68A {Mus
musculus} PDB: 3c4t_A 2eb1_A
Length = 265
Score = 30.9 bits (70), Expect = 0.020
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLR 68
G G++ + AK+ AA A+ L+
Sbjct: 238 KFKGVGRSYRIAKSAAARRALRSLK 262
>3rv0_A K. polysporus DCR1; RNAse III enzyme, RNA binding protein; 2.29A
{Vanderwaltozyma polyspora}
Length = 341
Score = 30.1 bits (68), Expect = 0.033
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 28 TGQFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYLRLMTK 72
F+ V++ + +G + +EA+ AA +E L+ K
Sbjct: 281 MPPFRVEVKIGDILLDE--AEGNSIREAEHRAAMKVLENDELLRK 323
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM,
riken structural genomics/proteomics initiative, RSGI,
structural genomics; NMR {Mus musculus} SCOP: d.50.1.1
PDB: 2rs6_A
Length = 99
Score = 29.4 bits (66), Expect = 0.040
Identities = 8/38 (21%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 30 QFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYL 67
+F V++ + G +++A++ AA + + YL
Sbjct: 37 KFMCEVRVEGFNY-AGMGNSTNKKDAQSNAARDFVNYL 73
>1x48_A Interferon-induced, double-stranded RNA- activated protein
kinase; structure genomics, DSRM domain, structural
genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Length = 88
Score = 28.1 bits (62), Expect = 0.11
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLR 68
G G T+QEAK +AA A + L
Sbjct: 52 GSGVTKQEAKQLAAKEAYQKLL 73
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: d.50.1.1
Length = 98
Score = 27.5 bits (61), Expect = 0.20
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 47 GQGKTQQEAKTVAAHNAIEYL 67
G +++ AK AA +E L
Sbjct: 62 GTASSKKLAKNKAARATLEIL 82
>1qu6_A Protein kinase PKR; dsRNA-binding domain, solution structure,
transferase; NMR {Homo sapiens} SCOP: d.50.1.1 d.50.1.1
Length = 179
Score = 27.6 bits (61), Expect = 0.27
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLR 68
G G T+QEAK +AA A +
Sbjct: 150 GTGSTKQEAKQLAAKLAYLQIL 171
Score = 26.8 bits (59), Expect = 0.62
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 45 CHGQGKTQQEAKTVAAHNAIEYLRLMTKS 73
G+G++++EAK AA A+E L K+
Sbjct: 58 PEGEGRSKKEAKNAAAKLAVEILNKEKKA 86
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure,
protein/RNA, protein DSRBD, RNA hairpin; NMR
{Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Length = 76
Score = 26.5 bits (59), Expect = 0.31
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLRLM 70
V G+G ++ +K AA + L+ +
Sbjct: 50 VTEGEGNGKKVSKKRAAEKMLVELQKL 76
>1x49_A Interferon-induced, double-stranded RNA- activated protein
kinase; structure genomics, DSRM domain, structural
genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Length = 97
Score = 27.0 bits (60), Expect = 0.31
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 46 HGQGKTQQEAKTVAAHNAIEYLR 68
+G+++QEA+ AA A++ L
Sbjct: 60 EAKGRSKQEARNAAAKLAVDILD 82
>1o0w_A Ribonuclease III, RNAse III; TM1102, structural genomics, JCSG,
PSI, protein structure initiative, joint center for
structural genomics; 2.00A {Thermotoga maritima} SCOP:
a.149.1.1 d.50.1.1
Length = 252
Score = 27.2 bits (61), Expect = 0.36
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 30 QFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYLR 68
F V++ +A G+G+T++EA+ AA A E L
Sbjct: 212 IFVVEVRVNGKTIA--TGKGRTKKEAEKEAARIAYEKLL 248
>3p1x_A Interleukin enhancer-binding factor 3; structural genomics,
PSI-biology, protein structure initiati northeast
structural genomics consortium, NESG; 1.90A {Homo
sapiens}
Length = 75
Score = 26.1 bits (58), Expect = 0.51
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLR 68
G G ++ AK AA A+E L
Sbjct: 46 KFQGAGSNKKVAKAYAALAALEKLF 70
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus
musculus} SCOP: d.50.1.1
Length = 89
Score = 26.1 bits (58), Expect = 0.62
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLRLMTKS 73
V G G ++ AK AA + L +
Sbjct: 50 VATGTGPNKKIAKKNAAEAMLLQLGYKAST 79
>2dix_A Interferon-inducible double stranded RNA- dependent protein
kinase activator A; structure genomics, DSRM domain,
hypothetical protein PRKRA; NMR {Homo sapiens} SCOP:
d.50.1.1
Length = 84
Score = 25.8 bits (57), Expect = 0.73
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLR 68
C G+G +++ AK AA AI L+
Sbjct: 51 TCTGEGTSKKLAKHRAAEAAINILK 75
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing,
gene regulation-RNA complex; 2.20A {Homo sapiens}
Length = 88
Score = 25.7 bits (57), Expect = 0.86
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLRLM 70
G G +++ AK AA + + +
Sbjct: 62 GSGTSKKLAKRNAAAKMLLRVHTV 85
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA
complex, protein-RNA interactions, RNA-bining protein;
1.90A {Xenopus laevis} SCOP: d.50.1.1
Length = 69
Score = 25.2 bits (56), Expect = 0.92
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLR 68
G G ++Q AK VAA + +
Sbjct: 47 GSGTSKQVAKRVAAEKLLTKFK 68
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomic
protein structure initiative; 2.10A {Mycobacterium
tuberculosis}
Length = 242
Score = 26.0 bits (58), Expect = 0.96
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 30 QFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYL 67
+F A+V + G G++++EA+ AA A + L
Sbjct: 194 EFTAVVVVMDSEYG--SGVGRSKKEAEQKAAAAAWKAL 229
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain,
structural genomics, NPPSFA, national project on
protein structural and functional analyses; NMR {Homo
sapiens} SCOP: d.50.1.1
Length = 97
Score = 25.6 bits (56), Expect = 1.1
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLRLMTKSK 74
G +++ AK A ++ + T
Sbjct: 61 ASGPSKKTAKLHVAVKVLQAMGYPTGFD 88
>2ljh_A Double-stranded RNA-specific editase ADAR; DSRBD, DSRBM, editing,
hydrolase; NMR {Drosophila melanogaster}
Length = 114
Score = 25.7 bits (56), Expect = 1.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 47 GQGKTQQEAKTVAAHNAIEYL 67
GQG++++ A+ AA A+
Sbjct: 79 GQGRSKKVARIEAAATALRSF 99
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA
binding protein; 2.14A {Homo sapiens}
Length = 90
Score = 25.4 bits (56), Expect = 1.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLR 68
C GQG +++ AK AA A+++L+
Sbjct: 57 SCTGQGPSKKAAKHKAAEVALKHLK 81
>2b7t_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding
protein, hydrolase; NMR {Rattus norvegicus} SCOP:
d.50.1.1 PDB: 2l3c_A
Length = 73
Score = 24.9 bits (55), Expect = 1.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 47 GQGKTQQEAKTVAAHNAIEYL 67
G G T+++AK AA A+
Sbjct: 49 GSGPTKKKAKLHAAEKALRSF 69
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 25.6 bits (55), Expect = 1.5
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 3/23 (13%)
Query: 32 QALVQLATYPVAVCHGQ---GKT 51
QAL++L + G GKT
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKT 164
>2l3j_A Double-stranded RNA-specific editase 1; editing, dsRNA recognition,
DSRBM, hydrolase-RNA complex; NMR {Rattus norvegicus}
Length = 236
Score = 25.7 bits (55), Expect = 1.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYL 67
G G+ ++ AK AA +A+ +
Sbjct: 200 FFEGSGRNKKLAKARAAQSALATV 223
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding
protein, hydrolase; NMR {Rattus norvegicus} SCOP:
d.50.1.1 PDB: 2l2k_B
Length = 71
Score = 24.5 bits (54), Expect = 1.7
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYL 67
G G+ ++ AK AA +A+ +
Sbjct: 43 FFEGSGRNKKLAKARAAQSALATV 66
>2yt4_A Protein DGCR8; DSRBD, RNA binding domain, RNA binding protein;
2.60A {Homo sapiens}
Length = 232
Score = 25.5 bits (55), Expect = 1.8
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 42 VAVCHGQGKTQQEAKTVAAHNAIEYL 67
V G +++ AK AA +E L
Sbjct: 63 VTYGSGTASSKKLAKNKAARATLEIL 88
Score = 25.1 bits (54), Expect = 2.2
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYL 67
G K ++ K +A+ ++ L
Sbjct: 173 TVRGWCKNKRVGKQLASQKILQLL 196
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain,
DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: d.50.1.1
Length = 89
Score = 25.0 bits (55), Expect = 1.8
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 47 GQGKTQQEAKTVAAHNAIEYL 67
G G +++ AK AA + +
Sbjct: 63 GSGTSKKLAKRNAAAKMLLRV 83
>2l33_A Interleukin enhancer-binding factor 3; structural genomics,
northeast structural genomics consortiu PSI-biology,
protein structure initiative, DRBM; NMR {Homo sapiens}
Length = 91
Score = 24.7 bits (54), Expect = 1.9
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 44 VCHGQGKTQQEAKTVAAHNAIEYLR 68
G G ++ AK AA A+E L
Sbjct: 56 KFQGAGSNKKVAKAYAALAALEKLF 80
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein,
gene regulation; 3.00A {Arabidopsis thaliana} PDB:
2l2m_A
Length = 76
Score = 24.6 bits (54), Expect = 2.0
Identities = 4/22 (18%), Positives = 12/22 (54%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLR 68
+T+++A+ A A+ ++
Sbjct: 52 AATRTKKDAEISAGRTALLAIQ 73
>3n3w_A Ribonuclease III; nuclease domain, ribonuclase III, IDP90862,
csgid, structura genomics; 2.21A {Campylobacter jejuni
subsp}
Length = 248
Score = 25.2 bits (56), Expect = 2.0
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 30 QFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYL 67
QF+ + L +A +++EA+ +AA A+E L
Sbjct: 210 QFEIALMLDGKELA--RAIAGSKKEAQQMAAKIALEKL 245
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene
regulation, NUCL protein, gene regulation,nuclear
protein; NMR {Homo sapiens}
Length = 85
Score = 24.2 bits (53), Expect = 2.5
Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Query: 30 QFQALVQLATYPVAVCHGQGKTQQEAKTVAAHNAIEYLRL 69
+ V + G+G + Q+A+ AA +A+E
Sbjct: 39 TYTVAVYFKGERIGC--GKGPSIQQAEMGAAMDALEKYNF 76
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase,
glutaminase, thioester intermediate, ligas; HET: ADP;
1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A*
3umm_A*
Length = 1303
Score = 25.0 bits (54), Expect = 2.9
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 8/47 (17%)
Query: 4 SGLLDTRVCLISTNGSNSIAFLHSTGQFQALVQLATYPVAVCHGQGK 50
S + R L+ S S+ L + P+AV HG+G+
Sbjct: 1170 SDRFEARFSLVEVTQSPSL-LLQGMVG-------SQMPIAVSHGEGR 1208
>3mjj_A Predicted acetamidase/formamidase; beta/alpha structure, hydrolase;
1.99A {Thermoanaerobacter tengcongensis} PDB: 3tkk_A
Length = 301
Score = 24.6 bits (53), Expect = 3.7
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 39 TYPVAVCHGQGKTQQEAKTVAAHNAIEYL 67
T V ++ +A +A H+ E
Sbjct: 224 TAEVTATIASAESLDKAVEIAVHDMAELF 252
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative,
MCSG, midwest center for structural genomics; HET: ABF;
1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB:
1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Length = 219
Score = 24.4 bits (54), Expect = 3.7
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 51 TQQEAKTVAAHNAIEY 66
TQ E K A++Y
Sbjct: 2 TQDELKKAVGWAALQY 17
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken
structural genomics/proteomi initiative, RSGI,
structural genomics; HET: A5P; 1.74A {Thermus
thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A*
1uj4_A*
Length = 227
Score = 24.4 bits (54), Expect = 4.2
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 50 KTQQEAKTVAAHNAIEY 66
+ + K AAH AI Y
Sbjct: 3 RPLESYKKEAAHAAIAY 19
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural
genomics, pentose phosphate pathway, carbon fixation,
NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB:
3ixq_A*
Length = 226
Score = 24.4 bits (54), Expect = 4.4
Identities = 3/16 (18%), Positives = 8/16 (50%)
Query: 51 TQQEAKTVAAHNAIEY 66
+ ++ K A A++
Sbjct: 2 SNEDLKLKVAKEAVKL 17
>2nug_A Ribonuclease III, RNAse III; dsRNA, RNA interference,
endonucleolytic cleavage, hydrolase/RNA complex; 1.70A
{Aquifex aeolicus} SCOP: a.149.1.1 d.50.1.1 PDB: 1yyw_A
2nue_A 2nuf_A 1yyk_A 1yz9_A 1yyo_A 2ez6_A 1rc7_A 1i4s_A
1jfz_A 1rc5_A
Length = 221
Score = 24.0 bits (53), Expect = 4.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 47 GQGKTQQEAKTVAAHNAIEYLR 68
G+GK+++EA+ AA I+ L
Sbjct: 197 GEGKSKKEAEQRAAEELIKLLE 218
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase,
northeast structural genomics consortium, IR21,
structural genomics, PSI; HET: CIT; 1.90A {Haemophilus
influenzae} SCOP: c.124.1.4 d.58.40.1
Length = 219
Score = 24.0 bits (53), Expect = 5.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 51 TQQEAKTVAAHNAIEY 66
Q E K +AA A++Y
Sbjct: 2 NQLEMKKLAAQAALQY 17
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural
genomics center for infectious DI isomerase, ribose
isomerase; HET: R5P; 1.71A {Burkholderia thailandensis}
PDB: 3u7j_A*
Length = 239
Score = 24.1 bits (53), Expect = 5.5
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 51 TQQEAKTVAAHNAIEY 66
TQ E K + A Y
Sbjct: 10 TQDELKRLVGEAAARY 25
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW,
STRU genomics, seattle structural genomics center for
infectious; HET: 5RP; 2.30A {Bartonella henselae}
Length = 255
Score = 24.1 bits (53), Expect = 5.7
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 51 TQQEAKTVAAHNAIEY 66
Q+ K +AA A+E+
Sbjct: 23 NVQQLKKMAALKALEF 38
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119,
center for structu genomics of infectious diseases,
csgid; 2.32A {Francisella tularensis subsp}
Length = 224
Score = 23.6 bits (52), Expect = 6.7
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 51 TQQEAKTVAAHNAIEY 66
Q E K +AA A +
Sbjct: 8 NQDELKKLAATEAAKS 23
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A
{Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB:
1lk7_A*
Length = 229
Score = 23.6 bits (52), Expect = 6.9
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 51 TQQEAKTVAAHNAIEY 66
+E K +AA A+++
Sbjct: 2 NVEEMKKIAAKEALKF 17
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.128 0.358
Gapped
Lambda K H
0.267 0.0778 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 971,005
Number of extensions: 42192
Number of successful extensions: 115
Number of sequences better than 10.0: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 45
Length of query: 74
Length of database: 6,701,793
Length adjustment: 44
Effective length of query: 30
Effective length of database: 5,473,269
Effective search space: 164198070
Effective search space used: 164198070
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.3 bits)