Query psy15721
Match_columns 571
No_of_seqs 281 out of 1030
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 19:45:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pbi_A Regulator of G-protein 100.0 2E-105 8E-110 849.3 27.9 332 3-338 91-422 (424)
2 1fqi_A RGS9, regulator of G-pr 100.0 3.3E-35 1.1E-39 268.5 14.0 146 193-339 1-146 (147)
3 2a72_A Regulator of G-protein 100.0 7E-32 2.4E-36 245.9 12.6 134 203-337 3-136 (146)
4 2dlv_A RGS18, regulator of G-p 100.0 1.6E-31 5.5E-36 240.9 12.1 132 203-335 5-137 (140)
5 2bv1_A Regulator of G-protein 100.0 1.8E-31 6.2E-36 242.9 11.7 132 203-335 12-143 (145)
6 2jm5_A RGS18, regulator of G-p 100.0 1.8E-31 6.2E-36 244.7 11.4 133 204-337 2-135 (151)
7 2af0_A Regulator of G-protein 100.0 1.2E-31 4.2E-36 244.0 9.4 138 191-334 6-144 (146)
8 1zv4_X RGS17, regulator of G-p 100.0 5.6E-31 1.9E-35 244.3 13.6 134 201-335 21-155 (158)
9 2crp_A RGS5, regulator of G-pr 100.0 7.2E-31 2.5E-35 240.2 12.4 133 202-335 14-147 (150)
10 1cmz_A Protein (GAIP (G-alpha 100.0 3.2E-31 1.1E-35 242.6 9.5 134 201-335 8-142 (152)
11 2ihd_A RGS8, regulator of G-pr 100.0 4.2E-31 1.4E-35 244.2 10.2 139 191-333 16-155 (155)
12 3c7l_A Regulator of G-protein 100.0 3.3E-31 1.1E-35 239.4 9.3 128 204-332 9-137 (137)
13 2oj4_A RGS3, regulator of G-pr 100.0 2.7E-31 9.1E-36 235.1 8.5 124 208-332 2-126 (127)
14 2dlr_A RGS10, regulator of G-p 100.0 3.9E-31 1.3E-35 241.7 7.8 133 203-337 5-138 (149)
15 1dk8_A Axin; alpha-helix, PI-h 100.0 1.8E-30 6.1E-35 235.8 8.8 130 204-335 4-141 (147)
16 2ebz_A RGS12, regulator of G-p 100.0 2E-30 6.9E-35 238.7 8.6 130 203-334 5-137 (155)
17 2jnu_A RGS14, regulator of G-p 100.0 4.8E-31 1.7E-35 242.6 3.5 129 204-334 2-133 (154)
18 2ihb_B Regulator of G-protein 100.0 1.6E-30 5.5E-35 238.9 6.9 132 201-334 19-151 (153)
19 1agr_E RGS4; GI-alpha-1, hydro 100.0 6.3E-30 2.2E-34 248.0 10.6 132 203-335 49-181 (205)
20 1got_G GT-gamma; complex (GTP- 99.5 1E-14 3.6E-19 121.2 3.9 57 133-189 16-73 (73)
21 3v5w_G G gamma-I, guanine nucl 99.3 6.9E-13 2.4E-17 111.0 5.8 61 130-190 9-70 (77)
22 3cx8_B RHO guanine nucleotide 98.2 1.2E-05 4.2E-10 78.2 12.4 98 215-312 24-123 (203)
23 3v5w_A G-protein coupled recep 98.0 8.8E-06 3E-10 91.6 8.4 132 202-334 34-177 (689)
24 2acx_A G protein-coupled recep 97.9 2.1E-05 7.3E-10 86.4 9.9 130 214-344 50-186 (576)
25 4gou_A EHRGS-rhogef; RGS domai 97.4 0.00029 1E-08 71.7 8.3 107 216-323 15-129 (518)
26 1iap_A Guanine nucleotide exch 97.4 0.00027 9.3E-09 69.0 7.8 78 216-293 7-84 (211)
27 3ab3_B RHO guanine nucleotide 97.0 0.00023 7.8E-09 70.8 2.3 97 215-311 60-161 (246)
28 3c4z_A Rhodopsin kinase; Ser/T 95.1 0.048 1.6E-06 59.3 8.6 115 216-334 57-174 (543)
29 1fqj_C Retinal ROD rhodopsin-s 34.7 7.3 0.00025 28.8 -0.3 12 542-553 18-29 (42)
30 2ju4_A GMP-PDE gamma, retinal 31.6 46 0.0016 28.0 4.0 14 542-555 63-76 (87)
31 1jlp_A PSI-conotoxin PIIIF; mu 28.7 23 0.00079 23.5 1.4 13 106-118 8-20 (26)
32 3doe_B ADP-ribosylation factor 24.8 33 0.0011 32.4 2.3 25 214-238 27-51 (165)
No 1
>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.3e-105 Score=849.26 Aligned_cols=332 Identities=40% Similarity=0.747 Sum_probs=320.2
Q ss_pred CcccccccCCceeeeccCccccCCCCCCCCchhHHHHHHHHHhhhhhccCchhHHHHHHHHHHHHhcCcchhhhHHHHHH
Q psy15721 3 DENEVLEEVEGVQEFTIPYYWPWQHRQCPDNVEYAIYLEKRSLRNKQRHGLEEYELEALNNLKRNLANKWDLVSMQAEEQ 82 (571)
Q Consensus 3 d~~l~~k~D~t~YRFQtPyfWps~~w~~p~~~dYAiYL~Kr~~rnk~r~~L~dyE~e~l~~L~k~~~~~W~fi~mqA~~q 82 (571)
.|+|++|||++||||||||||||++|+ |+|+|||||||||+||| ++.|+|||+|+|++|+|.++|+|+||+|||++|
T Consensus 91 ~~~~~fk~d~~~Yrfq~py~wps~~w~-~~~~dyaiyl~kr~~~~--~~~l~~~e~e~~~~l~~~~~~~w~~i~~qa~~q 167 (424)
T 2pbi_A 91 PKNLILKPDSSLYRFQTPYFWPTQQWP-AEDTDYAIYLAKRNIKK--KGILEEYEKENYDFLNKKINYKWDFVIMQAKEQ 167 (424)
T ss_dssp TTCCSCCSSSCEEEECCGGGSCCSSCC-CCHHHHHHHHHHHHHTS--SSCCCHHHHHHHHHHHHHTGGGHHHHHHHHHHH
T ss_pred cccccccCCCeeEEeCCcccCcccCCC-cchhHHHHHHHHhhhhh--cCCcchhHHHHHhhhhhhhcCchHHHHHHHHHH
Confidence 358999999999999999999999999 99999999999999998 568999999999999999999999999999999
Q ss_pred HHHHhhccccchhhhhhhhhhhhhccCCCCCCCCCCCCCccccCCCCCCCcCCHHHHHHHHHHHHHhhcccccchhHHHH
Q psy15721 83 VRLAKDRKKVDKIVADSQERAYWRVHRPPPGCTSSLEPIPTCMRGTGHRKKRSVEDLKKEVDFLKSCLEKTRTKTSLVVE 162 (571)
Q Consensus 83 ~r~~K~r~K~dR~v~dsQErAfW~VhRPppg~~n~~e~~~~~~~~~~~~~~~s~d~lrreIE~Lr~~L~r~RiKvSka~E 162 (571)
+|++|+|||+||+|+||||||||+||||||||+|+||+|+.|..+....++++++++|++|+|||.+|.++|+|||+|++
T Consensus 168 ~~~~k~r~k~~r~v~~~qe~a~w~vhrp~pg~~~~~e~~~~~~~~~~~~~~~~~~~~r~~veqLk~~l~~~rikvS~~~e 247 (424)
T 2pbi_A 168 YRTGKERNKADRYALDCQEKAYWLVHRSPPGMNNVLDYGLDRVTNPNEVKKQTVTAVRKEIMYYQQALMRSTVKSSVSLG 247 (424)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHSCCTTSCCTTCCCSCBSSCTTCCCCCCHHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred HhhhhccchhhhhhhhhhhhhhhhhhCCCCCCccccccccccccCccccccccHHHHHHHHHHHHHHhcccceeHHHHHH
Confidence 99999999999999999999999999999999999999998866544567899999999999999999999999999999
Q ss_pred hHHHHHhhhccCCCcccCCCCCCCCCcCCcccccccCCCCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchh
Q psy15721 163 SLIPFSETYAEYDAFFTTPNPSNPWHNDDTTYWLLNSPLVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHEN 242 (571)
Q Consensus 163 ~Li~Yceq~~~yDPlLsgp~psNPWisDD~~~W~~n~~~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~EN 242 (571)
+|++||++|..+||||+||.++|||++||.++|+.|++++..||..+|.+|+.+|++||.||.|+.+|++||++++|.||
T Consensus 248 ~l~~y~e~~~~~DPll~g~~~sNPw~~~d~~~w~~~~~~~~~pt~~~v~~w~~sle~LL~dp~g~~~F~~FL~~e~s~En 327 (424)
T 2pbi_A 248 GIVKYSEQFSSNDAIMSGCLPSNPWITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGEN 327 (424)
T ss_dssp HHHHHHHHHGGGCHHHHCCSSCCHHHHCCTHHHHHTCTTCSSCBHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHHHHhhccCCCccccCCCCCCCCCCCccceeccCCCCCCCCHHHHhhhhcCHHHHHCCHHHHHHHHHHHHHhCChHH
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccc
Q psy15721 243 IRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRF 322 (571)
Q Consensus 243 L~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRF 322 (571)
|.||++|++|+.....++...|+.||++||+++||++||||+.+++.|.+.+..|++++|++||.+||. ||+.|+||||
T Consensus 328 L~Fwlave~fk~~~~~~~~~~A~~Iy~~YI~~~Sp~eVNId~~~r~~i~~~l~~P~~~lFd~AQ~~V~~-lM~~DsyprF 406 (424)
T 2pbi_A 328 LGFWEACEDLKYGDQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITVKGLRHPHRYVLDAAQTHIYM-LMKKDSYARY 406 (424)
T ss_dssp HHHHHHHHHHHHSCSSSHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHHHTTSCCTTTTHHHHHHHHH-HHHHTHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHhhCchHhH
Confidence 999999999999887789999999999999999999999999999999999999999999999999997 6999999999
Q ss_pred cCCHHHHHHHHhcCCC
Q psy15721 323 IRSDHYKNLLQAGKQP 338 (571)
Q Consensus 323 LrS~~YkelL~~~~q~ 338 (571)
++|+.|+++|++...|
T Consensus 407 l~S~~Y~~~Lq~~~~p 422 (424)
T 2pbi_A 407 LKSPIYKEMLAKAIEP 422 (424)
T ss_dssp HTSHHHHHHHHHCBCC
T ss_pred hcCHHHHHHHHHccCC
Confidence 9999999999996655
No 2
>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B*
Probab=100.00 E-value=3.3e-35 Score=268.47 Aligned_cols=146 Identities=45% Similarity=0.828 Sum_probs=133.7
Q ss_pred ccccccCCCCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhc
Q psy15721 193 TYWLLNSPLVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFL 272 (571)
Q Consensus 193 ~~W~~n~~~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFL 272 (571)
+||.+|++++..||..+|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.....++...|+.||++||
T Consensus 1 ~~w~~~~~~~~~p~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~a~~Iy~~yi 80 (147)
T 1fqi_A 1 QFWDLNAKLVDIPTKMRVERWAFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYGDQSKVKEKAEEIYKLFL 80 (147)
T ss_dssp -------CCCCCCCHHHHHHTTTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHT
T ss_pred CccccCCCCCCCCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999999999999999999999999999999999999887789999999999999
Q ss_pred CCCCCccCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhcCCCC
Q psy15721 273 KAGAPCEVNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAGKQPC 339 (571)
Q Consensus 273 apgAP~EVNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~~q~~ 339 (571)
.++||++||||+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|+..+.|.
T Consensus 81 ~~~s~~evni~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~~~p~ 146 (147)
T 1fqi_A 81 APGARRWINIDGKTMDITVKGLKHPHRYVLDAAQTHIYM-LMKKDSYARYLKSPIYKEMLAKAIEPQ 146 (147)
T ss_dssp STTCTTCCCCCHHHHHHHHHHTTSCCTTTTHHHHHHHHH-HHHHHTHHHHHTSHHHHHHHHHSCCC-
T ss_pred CCCCCcccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHhhCcHHHHhcCHHHHHHHHHhhCCC
Confidence 999999999999999999999999999999999999997 599999999999999999999977663
No 3
>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A
Probab=99.97 E-value=7e-32 Score=245.89 Aligned_cols=134 Identities=44% Similarity=0.953 Sum_probs=127.0
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCC
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNI 282 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNI 282 (571)
..||.++|.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+.....++...|+.||++||.++||.+|||
T Consensus 3 ~~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 82 (146)
T 2a72_A 3 KEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIKEVPSRVQEIWQEFLAPGAPSAINL 82 (146)
T ss_dssp CCCCHHHHHHGGGCHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCCHHHHHHHHhHHHHHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHcCCCCcccCCC
Confidence 56999999999999999999999999999999999999999999999999999877889999999999999999999999
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhcCC
Q psy15721 283 DGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAGKQ 337 (571)
Q Consensus 283 Dsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~~q 337 (571)
|+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|++...
T Consensus 83 ~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~~~ 136 (146)
T 2a72_A 83 DSKSYDKTTHNVKEPGRYTFEDAQEHIYK-LMKSDSYPRFIRSSAYQELLQAKKK 136 (146)
T ss_dssp CHHHHHHHHHHHHSTTTTTTHHHHHHHHH-HHHHTHHHHHHHSHHHHHHHHC---
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHhChhHhHhcCHHHHHHHHHhhc
Confidence 99999999999999999999999999997 5999999999999999999998543
No 4
>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=240.87 Aligned_cols=132 Identities=33% Similarity=0.678 Sum_probs=125.9
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc-hhhHHHHHHHHHHhcCCCCCccCC
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ-SKIPAKVKEIFDEFLKAGAPCEVN 281 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~-s~~~~~Ak~IY~kFLapgAP~EVN 281 (571)
..||..+|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.... .++...|+.||++||.++||.+||
T Consensus 5 ~~~~~~~~~~w~~sl~~iL~~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evn 84 (140)
T 2dlv_A 5 SSGSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVN 84 (140)
T ss_dssp CCCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSTTCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCccccC
Confidence 4688999999999999999999999999999999999999999999999999874 678899999999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 282 IDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 282 IDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
||+.+++.|.+.+..|.+++|+.||.+|+. ||+.|+||||++|+.|+++|++.
T Consensus 85 i~~~~r~~i~~~l~~p~~~~F~~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~ 137 (140)
T 2dlv_A 85 LDFHTKEVITNSITQPTLHSFDAAQSRVYQ-LMEQDSYTRFLKSDIYLDLMSGP 137 (140)
T ss_dssp CCHHHHHHHHHGGGSCCTTTTHHHHHHHHH-HHHHTHHHHHHTSHHHHHHHCCS
T ss_pred CcHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHhhCcchhhccCHHHHHHHHhc
Confidence 999999999999999999999999999997 59999999999999999999873
No 5
>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C*
Probab=99.97 E-value=1.8e-31 Score=242.91 Aligned_cols=132 Identities=39% Similarity=0.721 Sum_probs=126.9
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCC
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNI 282 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNI 282 (571)
..||..+|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.....++...|+.||++||.++||.+|||
T Consensus 12 ~~~~~~~~~~~~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~a~~Iy~~yi~~~s~~evni 91 (145)
T 2bv1_A 12 DVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTESDLLPCKAEEIYKAFVHSDAAKQINI 91 (145)
T ss_dssp EEEEHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHCCCCCCcccCc
Confidence 45888999999999999999999999999999999999999999999999999877799999999999999999999999
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 283 DGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 283 Dsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
|+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|+..
T Consensus 92 ~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~ 143 (145)
T 2bv1_A 92 DFRTRESTAKKIKAPTPTCFDEAQKVIYT-LMEKDSYPRFLKSDIYLNLLNDL 143 (145)
T ss_dssp CHHHHHHHHHHHTSCCTTTTHHHHHHHHH-HHHHTHHHHHHTSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHhhChhhhhccCHHHHHHHHHh
Confidence 99999999999999999999999999997 59999999999999999999874
No 6
>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A
Probab=99.97 E-value=1.8e-31 Score=244.74 Aligned_cols=133 Identities=33% Similarity=0.689 Sum_probs=126.2
Q ss_pred CCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc-hhhHHHHHHHHHHhcCCCCCccCCC
Q psy15721 204 VPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ-SKIPAKVKEIFDEFLKAGAPCEVNI 282 (571)
Q Consensus 204 ~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~-s~~~~~Ak~IY~kFLapgAP~EVNI 282 (571)
-||..+|.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+.... .++...|+.||++||.++||.+|||
T Consensus 2 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 81 (151)
T 2jm5_A 2 MVSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKGPQQIHLKAKAIYEKFIQTDAPKEVNL 81 (151)
T ss_dssp CCCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTTCSSSSSCCCC
T ss_pred CCCHHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHccCcchhhcCC
Confidence 378899999999999999999999999999999999999999999999999874 6788999999999999999999999
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhcCC
Q psy15721 283 DGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAGKQ 337 (571)
Q Consensus 283 Dsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~~q 337 (571)
|+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|++++++...
T Consensus 82 ~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~~~ 135 (151)
T 2jm5_A 82 DFHTKEVITNSITQPTLHSFDAAQSRVYQ-LMEQDSYTRFLKSDIYLDLMEGRPQ 135 (151)
T ss_dssp CHHHHHHHHHHTTSCCTTTTHHHHHHHHH-HHHHHHHHHHHTSHHHHHHHTSCC-
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHhhChhHhHhcCHHHHHHHHHhcc
Confidence 99999999999999999999999999997 5999999999999999999999543
No 7
>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*
Probab=99.97 E-value=1.2e-31 Score=243.96 Aligned_cols=138 Identities=28% Similarity=0.664 Sum_probs=128.9
Q ss_pred CcccccccCCCCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-chhhHHHHHHHHH
Q psy15721 191 DTTYWLLNSPLVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-QSKIPAKVKEIFD 269 (571)
Q Consensus 191 D~~~W~~n~~~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~ 269 (571)
|+.+|.. ..||..+|.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+... ..++...|+.||+
T Consensus 6 ~~~~~~~-----~~~s~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~ 80 (146)
T 2af0_A 6 ENLYFQS-----MKPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYT 80 (146)
T ss_dssp HHHHHHH-----TSCCHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred CCccccc-----CCCCHHHHHHHHhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 4556653 348999999999999999999999999999999999999999999999999987 4678899999999
Q ss_pred HhcCCCCCccCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 270 EFLKAGAPCEVNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 270 kFLapgAP~EVNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
+||.++||.+|||++.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|+.
T Consensus 81 ~yi~~~s~~evNi~~~~r~~i~~~l~~~~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~ 144 (146)
T 2af0_A 81 DFIEKEAPKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYS-LMENNSYPRFLESEFYQDLCKK 144 (146)
T ss_dssp HHTSTTCTTCCCCCHHHHHHHHHHGGGCCTTTTHHHHHHHHH-HHHHTHHHHHHHSHHHHHHHCC
T ss_pred HHCcCCCCcccCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HHhhChHHhHccCHHHHHHHhc
Confidence 999999999999999999999999999999999999999997 5999999999999999999976
No 8
>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}
Probab=99.97 E-value=5.6e-31 Score=244.31 Aligned_cols=134 Identities=32% Similarity=0.665 Sum_probs=126.3
Q ss_pred CCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc-hhhHHHHHHHHHHhcCCCCCcc
Q psy15721 201 LVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ-SKIPAKVKEIFDEFLKAGAPCE 279 (571)
Q Consensus 201 ~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~-s~~~~~Ak~IY~kFLapgAP~E 279 (571)
.+..||..+|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|++... ..+...|+.||++||.++||.+
T Consensus 21 ~~~~~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~e 100 (158)
T 1zv4_X 21 QSMNPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKE 100 (158)
T ss_dssp TTSSCCHHHHHHHTTCHHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTCCC-CCC
T ss_pred CCCCCCHHHHHHHHhhHHHHhCCHHHHHHHHHHHHHccCHhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHCCCCCCce
Confidence 356799999999999999999999999999999999999999999999999999864 5788999999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 280 VNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 280 VNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
||||+.+++.|.+.+..|.+++|+.||.+|+. ||+.|+||||++|+.|+++|++.
T Consensus 101 vNi~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-lm~~d~fprFl~S~~y~~~l~~~ 155 (158)
T 1zv4_X 101 VSLDSRVREVINRNLLDPNPHMYEDAQLQIYT-LMHRDSFPRFLNSQIYKSFVEST 155 (158)
T ss_dssp CCCCHHHHHHHHHTTSSCCTTTTHHHHHHHHH-HHHHTTHHHHTTSHHHHHHHHHH
T ss_pred eecCHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHChHHhHhcCHHHHHHHHHh
Confidence 99999999999999999999999999999997 59999999999999999999884
No 9
>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=7.2e-31 Score=240.18 Aligned_cols=133 Identities=34% Similarity=0.663 Sum_probs=126.9
Q ss_pred CCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc-hhhHHHHHHHHHHhcCCCCCccC
Q psy15721 202 VEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ-SKIPAKVKEIFDEFLKAGAPCEV 280 (571)
Q Consensus 202 ~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~-s~~~~~Ak~IY~kFLapgAP~EV 280 (571)
...|+..++.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.... .++...|+.||++||.++||.+|
T Consensus 14 ~~~~s~~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~ev 93 (150)
T 2crp_A 14 TQKTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPAKMAEKAKQIYEEFIQTEAPKEV 93 (150)
T ss_dssp CCCCCHHHHTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTTHHHHHHHHHHHHTSSTTCSSCC
T ss_pred CCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHccCCCCccC
Confidence 35799999999999999999999999999999999999999999999999999874 67899999999999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 281 NIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 281 NIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
|||+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|++.
T Consensus 94 Ni~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~ 147 (150)
T 2crp_A 94 NIDHFTKDITMKNLVEPSLSSFDMAQKRIHA-LMEKDSLPRFVRSEFYQELISGP 147 (150)
T ss_dssp SCCHHHHHHHHHTTSSCSSGGGHHHHHHHHH-HHHHTHHHHHHHSHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHHHHhhccCHHHHHHHHHc
Confidence 9999999999999999999999999999997 59999999999999999999874
No 10
>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1
Probab=99.97 E-value=3.2e-31 Score=242.64 Aligned_cols=134 Identities=37% Similarity=0.691 Sum_probs=122.9
Q ss_pred CCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-chhhHHHHHHHHHHhcCCCCCcc
Q psy15721 201 LVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-QSKIPAKVKEIFDEFLKAGAPCE 279 (571)
Q Consensus 201 ~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~kFLapgAP~E 279 (571)
....||..++.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+... ...+...|+.||++||.++||.+
T Consensus 8 ~~~~p~~~~~~~~~~sl~~iL~~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~e 87 (152)
T 1cmz_A 8 GGGIPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDEKARLIYEDYVSILSPKE 87 (152)
T ss_dssp ----CCHHHHHHHTTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHTTTCSSSCC
T ss_pred CCCCCCHHHHHHHHhhHHHHHCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCce
Confidence 34679999999999999999999999999999999999999999999999999986 45788999999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 280 VNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 280 VNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
|||++.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|++++++.
T Consensus 88 vni~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~ 142 (152)
T 1cmz_A 88 VSLDSRVREGINKKMQEPSAHTFDDAQLQIYT-LMHRDSYPRFLSSPTYRALLPWV 142 (152)
T ss_dssp CSCCSHHHHHHHHHSSSCCTTSTHHHHHHHHH-HHHHHTHHHHTTCHHHHTTC---
T ss_pred eeCCHHHHHHHHHHhcCCchHHHHHHHHHHHH-HHHHChHHhHhcCHHHHHHHHHh
Confidence 99999999999999999999999999999997 59999999999999999999884
No 11
>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A
Probab=99.97 E-value=4.2e-31 Score=244.18 Aligned_cols=139 Identities=36% Similarity=0.678 Sum_probs=121.9
Q ss_pred CcccccccCCCCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-chhhHHHHHHHHH
Q psy15721 191 DTTYWLLNSPLVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-QSKIPAKVKEIFD 269 (571)
Q Consensus 191 D~~~W~~n~~~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~ 269 (571)
+..||... ...||..++.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+... ..++...|+.||+
T Consensus 16 ~~~~~~~~---~~~~s~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~ 92 (155)
T 2ihd_A 16 ENLYFQSM---LKRLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRSTAKLVSKAHRIFE 92 (155)
T ss_dssp ---------------CHHHHHHTTSCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cceeeeCC---CCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 45677643 3479999999999999999999999999999999999999999999999999987 5678899999999
Q ss_pred HhcCCCCCccCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHH
Q psy15721 270 EFLKAGAPCEVNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQ 333 (571)
Q Consensus 270 kFLapgAP~EVNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~ 333 (571)
+||.++||.+||||+.+++.|.+.+..|.+++|+.||.+|+. ||+.|+||||++|+.|+++|+
T Consensus 93 ~yi~~~s~~evNI~~~~r~~i~~~l~~p~~~~Fd~aq~~V~~-~m~~d~f~rFl~S~~y~~~l~ 155 (155)
T 2ihd_A 93 EFVDVQAPREVNIDFQTREATRKNLQEPSLTCFDQAQGKVHS-LMEKDSYPRFLRSKMYLDLLS 155 (155)
T ss_dssp HHTSTTCTTCCCCCHHHHHHHHHHTTSCCTTTTHHHHHHHHH-HHHHTHHHHHHTSHHHHTTC-
T ss_pred HHCcCCCccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHhhChhHhhccCHHHHHHHC
Confidence 999999999999999999999999999999999999999997 599999999999999999874
No 12
>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*
Probab=99.97 E-value=3.3e-31 Score=239.38 Aligned_cols=128 Identities=35% Similarity=0.674 Sum_probs=118.5
Q ss_pred CCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc-hhhHHHHHHHHHHhcCCCCCccCCC
Q psy15721 204 VPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ-SKIPAKVKEIFDEFLKAGAPCEVNI 282 (571)
Q Consensus 204 ~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~-s~~~~~Ak~IY~kFLapgAP~EVNI 282 (571)
.||..++.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.... .++...|+.||++||.++||.+|||
T Consensus 9 ~~~~~~~~~w~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~~~~~~a~~Iy~~yi~~~s~~evNi 88 (137)
T 3c7l_A 9 GSFSEDVLGWRESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSATKLASRAHHIFDEYIRSEAPKEVNI 88 (137)
T ss_dssp -----CHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCC
T ss_pred CCChHHHHHHHHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCCccCCC
Confidence 477789999999999999999999999999999999999999999999999884 6789999999999999999999999
Q ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHH
Q psy15721 283 DGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLL 332 (571)
Q Consensus 283 Dsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL 332 (571)
|+.+++.|.+.+..|.+++|+.||.+|+. ||+.|+||||++|+.|+++|
T Consensus 89 ~~~~r~~i~~~l~~~~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l 137 (137)
T 3c7l_A 89 DHETRELTKTNLQAATTSCFDVAQGKTRT-LMEKDSYPRFLKSPAYRDLA 137 (137)
T ss_dssp CHHHHHHHHHHHHTTCTTTTHHHHHHHHH-HHHTTHHHHHHTSHHHHTTC
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHChhHhhCcCHHHHHhC
Confidence 99999999999999999999999999997 59999999999999999874
No 13
>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=235.07 Aligned_cols=124 Identities=40% Similarity=0.728 Sum_probs=118.2
Q ss_pred HHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-chhhHHHHHHHHHHhcCCCCCccCCCCHHH
Q psy15721 208 KRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-QSKIPAKVKEIFDEFLKAGAPCEVNIDGRT 286 (571)
Q Consensus 208 ~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~kFLapgAP~EVNIDskt 286 (571)
.++.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+... ..++...|+.||++||.++||.+||||+.+
T Consensus 2 ~~~~~w~~sl~~iL~~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~a~~I~~~yi~~~s~~evni~~~~ 81 (127)
T 2oj4_A 2 EEALKWGESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQSKMASKAKKIFAEYIAIQACKEVNLDSYT 81 (127)
T ss_dssp THHHHHTTCHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHH
T ss_pred HHHHHHHhHHHHHHCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHccCCCCcCccCCHHH
Confidence 4689999999999999999999999999999999999999999999984 467889999999999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHH
Q psy15721 287 MERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLL 332 (571)
Q Consensus 287 re~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL 332 (571)
++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|
T Consensus 82 r~~i~~~l~~~~~~~F~~aq~~v~~-~m~~d~~~rFl~S~~y~~~l 126 (127)
T 2oj4_A 82 REHTKDNLQSVTRGCFDLAQKRIFG-LMEKDSYPRFLRSDLYLDLI 126 (127)
T ss_dssp HHHHHHTTSSCCTTTTHHHHHHHHH-HHHHTHHHHHHHSHHHHTTT
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHH-HHhhChhhhhccCHHHHHHh
Confidence 9999999999999999999999997 59999999999999999886
No 14
>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=3.9e-31 Score=241.74 Aligned_cols=133 Identities=30% Similarity=0.663 Sum_probs=124.7
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccch-hhHHHHHHHHHHhcCCCCCccCC
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQS-KIPAKVKEIFDEFLKAGAPCEVN 281 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s-~~~~~Ak~IY~kFLapgAP~EVN 281 (571)
..||..+|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|++.... ++...|+.||++||.++||.+||
T Consensus 5 ~~~~~~~~~~w~~sl~~iL~~~~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~evN 84 (149)
T 2dlr_A 5 SSGSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQVN 84 (149)
T ss_dssp CCCSSCCHHHHHHCHHHHHHSHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTTSSTTCSSCCC
T ss_pred CCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCCcccc
Confidence 45788899999999999999999999999999999999999999999999998754 78899999999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhcCC
Q psy15721 282 IDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAGKQ 337 (571)
Q Consensus 282 IDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~~q 337 (571)
|++.+++ +.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|+++..
T Consensus 85 i~~~~r~-~~~~~~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~~~ 138 (149)
T 2dlr_A 85 VEGQSRL-NEKILEEPHPLMFQKLQDQIFN-LMKYDSYSRFLKSDLFLKHKRTEEE 138 (149)
T ss_dssp CSCGGGC-CHHHHHSCCTTHHHHHHHHHHH-HHHHTTHHHHHHSHHHHHHHHHHSC
T ss_pred CCHHHHH-HHHHHcCCCHHHHHHHHHHHHH-HHHHChHHHHhcCHHHHHHHHhhcc
Confidence 9999998 8888889999999999999997 5999999999999999999998543
No 15
>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A
Probab=99.96 E-value=1.8e-30 Score=235.83 Aligned_cols=130 Identities=22% Similarity=0.433 Sum_probs=120.4
Q ss_pred CCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-----chhhHHHHHHHHHHhc-CCCCC
Q psy15721 204 VPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-----QSKIPAKVKEIFDEFL-KAGAP 277 (571)
Q Consensus 204 ~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-----~s~~~~~Ak~IY~kFL-apgAP 277 (571)
.||. +|.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+... ..++...|+.||++|| .++||
T Consensus 4 ~~~~-~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s~ 82 (147)
T 1dk8_A 4 SPTP-PYLKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNGI 82 (147)
T ss_dssp CCCC-HHHHHHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTSH
T ss_pred CCch-hHHHHHhCHHHHHCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccCC
Confidence 4553 799999999999999999999999999999999999999999999982 3468889999999999 99999
Q ss_pred ccCCCCHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 278 CEVNIDGRTMERTQTELK--NPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 278 ~EVNIDsktre~I~e~Lk--~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
++||||+.+++.|.+.+. .|++++|+.||.+|+. ||+.|+||||++|+.|+++|+.+
T Consensus 83 ~~vni~~~~r~~i~~~l~~~~~~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~~ 141 (147)
T 1dk8_A 83 VSRQTKPATKSFIKGCIMKQLIDPAMFDQAQTEIQA-TMEENTYPSFLKSDIYLEYTRTG 141 (147)
T ss_dssp HHHHSCHHHHHHHHHHHHHTCCCTTTTHHHHHHHHH-HHHHTHHHHHTTSHHHHTTTTSC
T ss_pred CCCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HHhhccccccccCHHHHHHHHhc
Confidence 999999999999999884 5788999999999997 59999999999999999999884
No 16
>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=238.71 Aligned_cols=130 Identities=34% Similarity=0.627 Sum_probs=120.4
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc---hhhHHHHHHHHHHhcCCCCCcc
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ---SKIPAKVKEIFDEFLKAGAPCE 279 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~---s~~~~~Ak~IY~kFLapgAP~E 279 (571)
..||.++|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++|+.... .++...|+.||++||.++||.+
T Consensus 5 ~~~~~~~~~~w~~sl~~iL~~p~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~~~a~~Iy~~yi~~~s~~e 84 (155)
T 2ebz_A 5 SSGRERRVASWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKATTP 84 (155)
T ss_dssp CCSSCCCTTHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHSSSSCSSC
T ss_pred CCCcHhHHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCCc
Confidence 4578889999999999999999999999999999999999999999999999753 4678899999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 280 VNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 280 VNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
|||++.++ .+.+.+..|++++|++||.+||. ||+.|+||||++|+.|+++|++
T Consensus 85 vni~~~~r-~~~~~~~~p~~~~Fd~aq~~V~~-lm~~d~~~rFl~S~~y~~~l~~ 137 (155)
T 2ebz_A 85 VNIDSQAQ-LADDVLRAPHPDMFKEQQLQIFN-LMKFDSYTRFLKSPLYQECILA 137 (155)
T ss_dssp CSSCGGGC-HHHHHHHSCCTTHHHHHHHHHHH-HHHHTHHHHHHHSHHHHHHHHH
T ss_pred cCCCHHHH-HHHHHhcCCCHHHHHHHHHHHHH-HHHHChhHHHhhCHHHHHHHHH
Confidence 99999987 45556678999999999999997 6999999999999999999987
No 17
>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.96 E-value=4.8e-31 Score=242.62 Aligned_cols=129 Identities=36% Similarity=0.649 Sum_probs=119.8
Q ss_pred CCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc---hhhHHHHHHHHHHhcCCCCCccC
Q psy15721 204 VPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ---SKIPAKVKEIFDEFLKAGAPCEV 280 (571)
Q Consensus 204 ~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~---s~~~~~Ak~IY~kFLapgAP~EV 280 (571)
+||.++|.+|+.+|++||+||.|+.+|++||++++|.|||.||++|++||+... .++...|+.||++||.++||++|
T Consensus 2 ~p~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~~~~a~~Iy~~yi~~~s~~ev 81 (154)
T 2jnu_A 2 MTEEQPVASWALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQALSPV 81 (154)
T ss_dssp CSSCCSGGGGGTCHHHHHHSHHHHHHHHHHTTTSSCTHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTSTTCSSCC
T ss_pred CCchHhHHHHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCCCccc
Confidence 688899999999999999999999999999999999999999999999999864 46788999999999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 281 NIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 281 NIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
|||+.++ .+.+.+..|++++|++||.+||. ||+.|+||||++|+.|+++|++
T Consensus 82 ni~~~~r-~~~~~~~~p~~~~Fd~aq~~V~~-lm~~d~~~rFl~S~~y~~~l~~ 133 (154)
T 2jnu_A 82 NIDRQAW-LGEEVLAEPRPDMFRAQQLQIFN-LMKFDSYARFVKSPLYRECLLA 133 (154)
T ss_dssp CSCCTTC-CCHHHHHSCCTTTTHHHHHHHHH-HHHTTHHHHHTTSTTHHHHHCS
T ss_pred CCcHHHH-HHHHHhcCCCHHHHHHHHHHHHH-HHHhChhHhhccCHHHHHHHHH
Confidence 9999987 33456678999999999999997 6999999999999999999987
No 18
>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A
Probab=99.96 E-value=1.6e-30 Score=238.93 Aligned_cols=132 Identities=30% Similarity=0.656 Sum_probs=106.5
Q ss_pred CCCCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccch-hhHHHHHHHHHHhcCCCCCcc
Q psy15721 201 LVEVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQS-KIPAKVKEIFDEFLKAGAPCE 279 (571)
Q Consensus 201 ~~~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s-~~~~~Ak~IY~kFLapgAP~E 279 (571)
.+..|+..++.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+..... ++...|+.||++||.++||.+
T Consensus 19 ~~~~~~~~~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~a~~Iy~~yi~~~s~~e 98 (153)
T 2ihb_B 19 SSSHQSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQEKAKEIYMTFLSSKASSQ 98 (153)
T ss_dssp ------CHHHHHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSTTCTTC
T ss_pred cCCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCCCcc
Confidence 3457888999999999999999999999999999999999999999999999998754 788999999999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 280 VNIDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 280 VNIDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
||||+.++. +...+..|++++|+.||.+|+. ||+.|+||||++|+.|+++|+.
T Consensus 99 vNi~~~~r~-~~~~~~~p~~~~Fd~aq~~V~~-~m~~d~~~rFl~S~~y~~~l~~ 151 (153)
T 2ihb_B 99 VNVEGQSRL-NEKILEEPHPLMFQKLQDQIFN-LMKYDSYSRFLKSDLFLKHKRT 151 (153)
T ss_dssp CCCCC------------CCTTTTHHHHHHHHH-HHHHTHHHHHTTSTTTC-----
T ss_pred CCCCHHHHH-HHHHhcCCCHHHHHHHHHHHHH-HHHHChHHhhccCHHHHHHHhc
Confidence 999999998 7777788999999999999997 5999999999999999999976
No 19
>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A
Probab=99.96 E-value=6.3e-30 Score=247.97 Aligned_cols=132 Identities=36% Similarity=0.700 Sum_probs=123.3
Q ss_pred CCCCHHHHHHhhhhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhcc-chhhHHHHHHHHHHhcCCCCCccCC
Q psy15721 203 EVPTEKRVRRWALSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSA-QSKIPAKVKEIFDEFLKAGAPCEVN 281 (571)
Q Consensus 203 ~~PT~~rV~rWs~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~kFLapgAP~EVN 281 (571)
..|+..++.+|+.+|++||.||.|+.+|++||++++|.|||.||++|++|+... ..++...|+.||++||.++||.+||
T Consensus 49 ~~~s~~~~~~w~~sle~IL~dp~g~~~F~~FL~~e~s~EnL~Fw~ave~yk~~~~~~~~~~~A~~Iy~~YI~~~Sp~evN 128 (205)
T 1agr_E 49 QRVSQEEVKKWAESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVN 128 (205)
T ss_dssp --CCHHHHHHHTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTTHHHHHHHHHHHHTSTTCTTCCC
T ss_pred CCCCHHHHHHHHhhHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHCCCCCchhhh
Confidence 468999999999999999999999999999999999999999999999999987 5678999999999999999999999
Q ss_pred CCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHhc
Q psy15721 282 IDGRTMERTQTELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQAG 335 (571)
Q Consensus 282 IDsktre~I~e~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~~ 335 (571)
||+.+++.|.+.+..|++++|+.||.+|+. ||+.|+||||++|+.|+++++..
T Consensus 129 I~~~~r~~i~~~l~~p~~~lFd~aq~~V~~-lM~~d~fprFl~S~~Y~~~l~~~ 181 (205)
T 1agr_E 129 LDSCTREETSRNMLEPTITCFDEAQKKIFN-LMEKDSYRRFLKSRFYLDLTNPS 181 (205)
T ss_dssp CCHHHHHHHHHHTTSCCTTTTHHHHHHHHH-HHHHTHHHHHTTSHHHHTCC---
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHhhHHHHhcCHHHHHHHHhh
Confidence 999999999999999999999999999997 59999999999999999999884
No 20
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=99.49 E-value=1e-14 Score=121.22 Aligned_cols=57 Identities=25% Similarity=0.264 Sum_probs=53.4
Q ss_pred cCCHHHHHHHHHHHHHhhcccccchhHHHHhHHHHHhhhccCCCcccCCC-CCCCCCc
Q psy15721 133 KRSVEDLKKEVDFLKSCLEKTRTKTSLVVESLIPFSETYAEYDAFFTTPN-PSNPWHN 189 (571)
Q Consensus 133 ~~s~d~lrreIE~Lr~~L~r~RiKvSka~E~Li~Yceq~~~yDPlLsgp~-psNPWis 189 (571)
..+++++|++|||||.+|+++|+|||+|+++|++||++|..+||||+|+. ++|||++
T Consensus 16 ~~~~~~lr~~veqLr~el~~~RikVS~aa~~L~~Yce~~~~~DpLl~g~~~~~NPf~e 73 (73)
T 1got_G 16 LTEKDKLKMEVDQLKKEVTLERMLVSKCCEEFRDYVEERSGEDPLVKGIPEDKNPFKE 73 (73)
T ss_dssp CTHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGCHHHHCCCGGGCTTCC
T ss_pred cccHHHHHHHHHHHHHHHCCchhhHHHHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCC
Confidence 46789999999999999999999999999999999999999999999955 8899984
No 21
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*
Probab=99.35 E-value=6.9e-13 Score=111.05 Aligned_cols=61 Identities=26% Similarity=0.394 Sum_probs=53.8
Q ss_pred CCCcCCHHHHHHHHHHHHHhhcccccchhHHHHhHHHHHhhhccCCCcccC-CCCCCCCCcC
Q psy15721 130 HRKKRSVEDLKKEVDFLKSCLEKTRTKTSLVVESLIPFSETYAEYDAFFTT-PNPSNPWHND 190 (571)
Q Consensus 130 ~~~~~s~d~lrreIE~Lr~~L~r~RiKvSka~E~Li~Yceq~~~yDPlLsg-p~psNPWisD 190 (571)
.+.+.++.++|+.|||||.+++..|+|||+++.+|+.||+++...||||+| +...|||.+.
T Consensus 9 s~~ss~i~q~rk~VeQLr~Ea~i~RikVSqaaadL~~yc~~~~~~DpLl~Gvp~~~NPFkeK 70 (77)
T 3v5w_G 9 SNNTASIAQARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREK 70 (77)
T ss_dssp -----CHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHSGGGCTTTSCCCGGGCTTTTC
T ss_pred ccchhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHhcCCCCCCcCCCCCCCCCCCCC
Confidence 445678999999999999999999999999999999999999999999999 7778999885
No 22
>3cx8_B RHO guanine nucleotide exchange factor 11; signal transduction, protein complex, GTP-binding, lipoprotein, membrane, nucleotide-binding; HET: GSP; 2.00A {Rattus norvegicus} PDB: 3cx6_B* 3cx7_B* 1htj_F
Probab=98.19 E-value=1.2e-05 Score=78.15 Aligned_cols=98 Identities=20% Similarity=0.278 Sum_probs=89.5
Q ss_pred hhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCCCHHHHHHHHHHh
Q psy15721 215 LSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNIDGRTMERTQTEL 294 (571)
Q Consensus 215 ~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNIDsktre~I~e~L 294 (571)
.+|+.|...|.-+..|..|+-.++-..-|.||+-++-|+....++..+.|.+||..||.++||..|+||..+...|...|
T Consensus 24 ~sle~Lk~rPAHLavFL~yvlsq~dP~~LlfyL~~d~yk~~~~Ke~rk~a~ei~stFL~~~ApL~v~vp~~~~~eid~~L 103 (203)
T 3cx8_B 24 QDLEKLKSHPAYLVVFLRYILSQADPGPLLFYLCSEVYQQTNPKDSRSLGKDIWNIFLEKNAPLRVKIPEMLQAEIDLRL 103 (203)
T ss_dssp HCHHHHHTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHTSCTTTCHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHHHHH
T ss_pred cCHHHHhcCcHHHHHHHHHHHhcCCchHHHHHHHHHHHhccChHHHHHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999888899999999999999999999999999998888766
Q ss_pred c--CCCHHHHHHHHHHHHHH
Q psy15721 295 K--NPSRFTYDAAAEHIYTL 312 (571)
Q Consensus 295 k--~P~r~lFDeAQ~~Vy~l 312 (571)
. +-.+.+|..+|+.++..
T Consensus 104 ~~ee~~R~~f~~~q~~~~~~ 123 (203)
T 3cx8_B 104 RNNEDPRNVLCEAQEAVMLE 123 (203)
T ss_dssp HTTCCCHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 3 45689999998887764
No 23
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=98.00 E-value=8.8e-06 Score=91.56 Aligned_cols=132 Identities=18% Similarity=0.323 Sum_probs=105.5
Q ss_pred CCCCCHHHHHHh------hhhHHHHhcChhhHHHHHHHHHhhc--cchhHHHHHHHHHhhhcc-chhhHHHHHHHHHHhc
Q psy15721 202 VEVPTEKRVRRW------ALSIEDLIKDPTGLAEFTSYLRKEY--SHENIRFWLMVTELRRSA-QSKIPAKVKEIFDEFL 272 (571)
Q Consensus 202 ~~~PT~~rV~rW------s~SLdeLL~DP~Gr~lFreFLekEf--S~ENL~FWlaVEefKk~~-~s~~~~~Ak~IY~kFL 272 (571)
.+.|+...+.+- ...++.|...|+|+.+|++||.+.. ...-+.||.+|++|.... ..++...+++||++||
T Consensus 34 ~p~~~~~~~~~~~~~~~~~~~~~~i~~q~ig~~~f~~f~~~~~~~~~~~~~~~~~v~~~~~~~~~~~r~~~~~~i~~~~~ 113 (689)
T 3v5w_A 34 LPEPSIRSVMQKYLEDRGEVTFEKIFSQKLGYLLFRDFCLNHLEEARPLVEFYEEIKKYEKLETEEERVARSREIFDSYI 113 (689)
T ss_dssp CCCTTHHHHHHHHHHHTTCCSHHHHHTSHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTSHH
T ss_pred CCCchHHHHHHHHHhhccccccceecCccHHHHHHHHHhcCcchhhhHHHHHHHHHHhhhccCchhhHHHHHHHHHHHhc
Confidence 345666555432 2358999999999999999987654 445799999999999766 4678889999999999
Q ss_pred CCCCCc-cCCCCHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 273 KAGAPC-EVNIDGRTMERTQTEL--KNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 273 apgAP~-EVNIDsktre~I~e~L--k~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
.+.+.. --+++..+.+.+.+.+ ..+..++|..+.+.|+.. |..+.|+.|+.|+.|..++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~~~~-l~~~~f~~~~~s~~~~r~~q~ 177 (689)
T 3v5w_A 114 MKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQN-LRGDVFQKFIESDKFTRFCQW 177 (689)
T ss_dssp HHHHHSSSSCCCHHHHHHHHHHHHTTCCCTTTTHHHHHHHHHH-HTTHHHHHHHHSHHHHHHHHH
T ss_pred chhhhhccCccchHHHHHHHHhhhhccCChHHHHHHHHHHHHH-hccCcccccccChhHHHHHhc
Confidence 876433 3357778888777765 345678999999999986 899999999999999999988
No 24
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=97.94 E-value=2.1e-05 Score=86.41 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=105.6
Q ss_pred hhhHHHHh-cChhhHHHHHHHHHhh-ccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccC-CCCHHHHHHH
Q psy15721 214 ALSIEDLI-KDPTGLAEFTSYLRKE-YSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEV-NIDGRTMERT 290 (571)
Q Consensus 214 s~SLdeLL-~DP~Gr~lFreFLekE-fS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EV-NIDsktre~I 290 (571)
..+|+.|. +.|+|+.+|++||.+. -....+.||.+|++|+......+...|+.|+++|+.+.++..+ .|+..+...+
T Consensus 50 ~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~ 129 (576)
T 2acx_A 50 ERDYHSLCERNPIGRLLFREFCATRPELSRCVAFLDGVAEYEVTPDDKRKACGRNLTQNFLSHTGPDLIPEVPRQLVTNC 129 (576)
T ss_dssp CCCHHHHHTTSHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHSCSSSCCSSTTCCHHHHHHH
T ss_pred ccCHHHhhccCchhHHHHHHHHhcCcchhHHHHHHHHHHhhhcccchhHHHHHHHHHHHhcCcccccccccCCHHHHHHH
Confidence 45799999 6899999999999966 4567889999999999988888899999999999999887665 3788887776
Q ss_pred HHHhc-CCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh---cCCCCCCCcc
Q psy15721 291 QTELK-NPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA---GKQPCTKKRF 344 (571)
Q Consensus 291 ~e~Lk-~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~---~~q~~~KkR~ 344 (571)
...+. .|...+|..+...++.. +....|..|+.|..+.++++. ...+...++|
T Consensus 130 ~~~l~~~~~~~~~~~l~~~~~~~-l~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~f 186 (576)
T 2acx_A 130 TQRLEQGPCKDLFQELTRLTHEY-LSVAPFADYLDSIYFNRFLQWKWLERQPVTKNTF 186 (576)
T ss_dssp HHHHHHCCCTTTTHHHHHHHHHH-HTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGE
T ss_pred HHHHhcCchHHHHHHHHHHHHHh-hccCcchhhcchhhhhhhhhhhhhhhcCccccce
Confidence 66554 57788999998888875 777778899999998888875 3444555544
No 25
>4gou_A EHRGS-rhogef; RGS domain, DH domain, PH domain, RHO guanine nucleotide EXC factor, signaling protein, GTPase accelerating protein; 2.30A {Entamoeba histolytica}
Probab=97.42 E-value=0.00029 Score=71.67 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=85.6
Q ss_pred hHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccc----hhhHHHHHHHHHHhcCCCCCccCCCCHHHHHHHH
Q psy15721 216 SIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQ----SKIPAKVKEIFDEFLKAGAPCEVNIDGRTMERTQ 291 (571)
Q Consensus 216 SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~----s~~~~~Ak~IY~kFLapgAP~EVNIDsktre~I~ 291 (571)
.|.++|.|.....+++-||..|.++|||.|.+.|--|..... .-+.+...-|-++||.-++.++||++.++...|+
T Consensus 15 tlqevledsfmkrllrcylsderseenldflesvglyesqfdkltpkvrlealnfikdqfldrnserqvnlsyqiqqsil 94 (518)
T 4gou_A 15 TLQEVLEDSFMKRLLRCYLSDERSEENLDFLESVGLYESQFDKLTPKVRLEALNFIKDQFLDRNSERQVNLSYQIQQSIL 94 (518)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcccccchhhhhHHHhccchHhhhhhcCchhhHHHHHhHHHHhhcccchhhcchhHHHHHHHH
Confidence 478889999999999999999999999999999987776543 2334445569999999999999999999999999
Q ss_pred HHhc----CCCHHHHHHHHHHHHHHccccCcccccc
Q psy15721 292 TELK----NPSRFTYDAAAEHIYTLLLKNDCYPRFI 323 (571)
Q Consensus 292 e~Lk----~P~r~lFDeAQ~~Vy~lLMKkDSYPRFL 323 (571)
+.+. +...++|.+|.+.--- |+-...|--|+
T Consensus 95 kklsevtsnapkdvfneakkatey-llyteqytyfi 129 (518)
T 4gou_A 95 KKLSEVTSNAPKDVFNEAKKATEY-LLYTEQYTYFI 129 (518)
T ss_dssp HHHHTCCSSCCTTTTHHHHHHHHH-HHHHHTHHHHH
T ss_pred HHHHHHhcCCChHHHHHHHhhhHH-hhhHHHHHHHH
Confidence 8874 3446899999987663 45555554443
No 26
>1iap_A Guanine nucleotide exchange factor P115rhogef; RGS, RGRGS, signaling protein; 1.90A {Homo sapiens} SCOP: a.91.1.1
Probab=97.42 E-value=0.00027 Score=69.02 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=73.1
Q ss_pred hHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCCCHHHHHHHHHH
Q psy15721 216 SIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNIDGRTMERTQTE 293 (571)
Q Consensus 216 SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNIDsktre~I~e~ 293 (571)
+|+.|...|.-+..|..|+-.++-.--|.||+-.+-|+.....+...-+.+||..||.++||.-||||..+...|...
T Consensus 7 sl~~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~~Ke~rk~~~Ei~stFL~~~ApL~v~v~e~i~~eiD~~ 84 (211)
T 1iap_A 7 SLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRT 84 (211)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTSTTCTTCCCCCHHHHHHHTTC
T ss_pred CHHHHhhccHHHHHHHHHHHHcCCchhhHHHHHHHHHhccChHHHHHHHHHHHHHHhCCCCCccccCCHHHHHHHHHH
Confidence 688889999999999999999999999999999999999988889999999999999999999999999988887665
No 27
>3ab3_B RHO guanine nucleotide exchange factor 1; signal transduction, protein complex, GTP-binding, membrane, transducer, lipoprotein, nucleotide-binding; HET: GDP; 2.40A {Homo sapiens} PDB: 1shz_C*
Probab=97.00 E-value=0.00023 Score=70.81 Aligned_cols=97 Identities=11% Similarity=0.117 Sum_probs=71.6
Q ss_pred hhHHHHhcChhhHHHHHHHHHhhccchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCCCCHHHHHHHHHHh
Q psy15721 215 LSIEDLIKDPTGLAEFTSYLRKEYSHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVNIDGRTMERTQTEL 294 (571)
Q Consensus 215 ~SLdeLL~DP~Gr~lFreFLekEfS~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVNIDsktre~I~e~L 294 (571)
.+|+.|...|.-+..|..|+-.++-.--|.||+-.+-|+....++.++.+.+||..||.++||.-||||..+...|.+.+
T Consensus 60 qsle~Lk~rPAHLaVFL~yV~sq~DPspLLfYL~tdlYk~~~~Ke~Rk~a~Ei~stFL~~~ApL~v~v~e~ia~eID~~r 139 (246)
T 3ab3_B 60 QSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTR 139 (246)
T ss_dssp CSGGGTTTCHHHHHHHHHHHHHHSCSHHHHHHHHHHHHC-------CCTTHHHHHHTTSTTCTTCCCCCTTGGGC-----
T ss_pred cCHHHHhccchHHHHHHHHHHhcCCchhhHHHHHHHHHhccChHHHHHHHHHHHHHHcCCCCCccccCCHHHHHHHHHHH
Confidence 36888889999999999999999999999999999999999888888899999999999999999999987765554433
Q ss_pred c-----CCCHHHHHHHHHHHHH
Q psy15721 295 K-----NPSRFTYDAAAEHIYT 311 (571)
Q Consensus 295 k-----~P~r~lFDeAQ~~Vy~ 311 (571)
. +..|..|-+||+.+..
T Consensus 140 ~~~~~ee~~R~~~~~~r~~~~~ 161 (246)
T 3ab3_B 140 ADLISEDVQRRFVQEVVQSQQV 161 (246)
T ss_dssp -------CHHHHHHHHHHTTHH
T ss_pred HhhChHHHHHHHHHHHHHHHHH
Confidence 2 2346667666665443
No 28
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=95.07 E-value=0.048 Score=59.33 Aligned_cols=115 Identities=17% Similarity=0.317 Sum_probs=86.6
Q ss_pred hHHHHh-cChhhHHHHHHHHHhhc-cchhHHHHHHHHHhhhccchhhHHHHHHHHHHhcCCCCCccCC-CCHHHHHHHHH
Q psy15721 216 SIEDLI-KDPTGLAEFTSYLRKEY-SHENIRFWLMVTELRRSAQSKIPAKVKEIFDEFLKAGAPCEVN-IDGRTMERTQT 292 (571)
Q Consensus 216 SLdeLL-~DP~Gr~lFreFLekEf-S~ENL~FWlaVEefKk~~~s~~~~~Ak~IY~kFLapgAP~EVN-IDsktre~I~e 292 (571)
.+..+. ..|+|..+|++||.... ...-..||..+++|...........|+.|++.|+..++...+. ++......+..
T Consensus 57 d~~~~~~~~~ig~~~~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~ 136 (543)
T 3c4z_A 57 GFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARA 136 (543)
T ss_dssp CHHHHHTSSHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHC
T ss_pred CHHHhhccCcccHHHHHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhc
Confidence 355555 58999999999999885 3455789999999998777788899999999999998865432 34444444433
Q ss_pred HhcCCCHHHHHHHHHHHHHHccccCccccccCCHHHHHHHHh
Q psy15721 293 ELKNPSRFTYDAAAEHIYTLLLKNDCYPRFIRSDHYKNLLQA 334 (571)
Q Consensus 293 ~Lk~P~r~lFDeAQ~~Vy~lLMKkDSYPRFLrS~~YkelL~~ 334 (571)
. ....+|......++.. +....++.|+.|..|..+++.
T Consensus 137 ~---~~~~l~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~ 174 (543)
T 3c4z_A 137 G---AGDGLFQPLLRAVLAH-LGQAPFQEFLDSLYFLRFLQW 174 (543)
T ss_dssp C------CTTHHHHHHHHHH-HTTHHHHHHHTSHHHHHHHHH
T ss_pred C---CCchhhHHHHHHHHHh-hhcCchHhhhhhhhhhhhhhh
Confidence 2 2234677777888875 777889999999999998876
No 29
>1fqj_C Retinal ROD rhodopsin-sensitive CGMP 3',5'- cyclic phosphodiesterase gamma-subunit...; RGS9, transducin, effector, pdegamma, G protein; HET: GDP; 2.02A {Bos taurus} SCOP: j.51.1.1
Probab=34.71 E-value=7.3 Score=28.80 Aligned_cols=12 Identities=42% Similarity=0.971 Sum_probs=9.5
Q ss_pred CCCccCcCCCCC
Q psy15721 542 KNTEVCPWEDEE 553 (571)
Q Consensus 542 ~~~~~~~~~~~~ 553 (571)
|-+-+||||--.
T Consensus 18 D~tViCPWEAf~ 29 (42)
T 1fqj_C 18 DITVICPWEAFN 29 (42)
T ss_dssp HHHTTCGGGGGT
T ss_pred CeEEEcchHhcC
Confidence 778899999643
No 30
>2ju4_A GMP-PDE gamma, retinal ROD rhodopsin-sensitive CGMP 3',5'-cyclic phosphodiesterase subunit gamma...; intrinsic disordered protein; HET: RCY; NMR {Bos taurus}
Probab=31.64 E-value=46 Score=28.01 Aligned_cols=14 Identities=43% Similarity=1.123 Sum_probs=10.9
Q ss_pred CCCccCcCCCCCcc
Q psy15721 542 KNTEVCPWEDEESC 555 (571)
Q Consensus 542 ~~~~~~~~~~~~~~ 555 (571)
|-+-+||||--+..
T Consensus 63 ditvicpweaf~hl 76 (87)
T 2ju4_A 63 DITVICPWEACNHC 76 (87)
T ss_dssp HHHTCCTTTTTTCC
T ss_pred CeeEEcchhhhcch
Confidence 77889999976554
No 31
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=28.67 E-value=23 Score=23.48 Aligned_cols=13 Identities=46% Similarity=0.897 Sum_probs=10.6
Q ss_pred hccCCCCCCCCCC
Q psy15721 106 RVHRPPPGCTSSL 118 (571)
Q Consensus 106 ~VhRPppg~~n~~ 118 (571)
.--||-|||-|.+
T Consensus 8 gscrpfpgcynal 20 (26)
T 1jlp_A 8 GSCRPFPGCYNAL 20 (26)
T ss_dssp TSCCCCTTTTTSS
T ss_pred ccccCCCchhhhh
Confidence 4469999999976
No 32
>3doe_B ADP-ribosylation factor-like protein 2-binding protein; binder of ARL2, small GTPase, effector, complex structure, GTP-binding, lipoprotein; HET: GTP; 2.25A {Homo sapiens} PDB: 3dof_B* 2k9a_A 2k0s_A
Probab=24.84 E-value=33 Score=32.38 Aligned_cols=25 Identities=24% Similarity=0.234 Sum_probs=21.9
Q ss_pred hhhHHHHhcChhhHHHHHHHHHhhc
Q psy15721 214 ALSIEDLIKDPTGLAEFTSYLRKEY 238 (571)
Q Consensus 214 s~SLdeLL~DP~Gr~lFreFLekEf 238 (571)
--.|++||.+|.....+..||++.+
T Consensus 27 VG~lEDil~sp~f~~~~~~Fme~~c 51 (165)
T 3doe_B 27 VGYLEDIIMDDEFQLLQRNFMDKYY 51 (165)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCHhHHHHHHHHHHhCC
Confidence 4468999999999999999999764
Done!