BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15723
(243 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383863221|ref|XP_003707080.1| PREDICTED: mRNA turnover protein 4 homolog [Megachile rotundata]
Length = 243
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 168/213 (78%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEKY IF+ SV NMRN+KLKD+R +W
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYVRIFLISVHNMRNNKLKDLRAEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKV+A ALGKS +DE+ + IH +S+ALKGQCGLLFTNR K +VL W + YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSSKDEVTEGIHKLSAALKGQCGLLFTNRKKHEVLKWMEEYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGF+ E + L EGP+P+FPHSIEP LRQLG+ T L KG+VTL K++TVCK G
Sbjct: 121 EADYARSGFVVQETITLPEGPMPDFPHSIEPHLRQLGMPTALQKGIVTLIKEYTVCKSGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
LTPEQARILKLL K +A FK++ ++KK G
Sbjct: 181 TLTPEQARILKLLDKPLATFKMIPLGVFSKKHG 213
>gi|328786487|ref|XP_393683.3| PREDICTED: mRNA turnover protein 4 homolog [Apis mellifera]
Length = 243
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 169/213 (79%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEKY IF+ SV NMRN+KLKD+R++W
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYARIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKV+A ALGKS E+E+ +N+H +S AL+GQCGLLFTNRSK +VL W YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSSENEVAENLHKLSLALRGQCGLLFTNRSKKEVLKWMREYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGFI+ E + L EGP+P+F HSIEP LRQLG+ T L KGVVTL K++TVCK G
Sbjct: 121 EIDYARSGFITQETITLSEGPIPDFSHSIEPHLRQLGMPTALQKGVVTLIKEYTVCKMGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
LTPEQARILKLL K +A FK++ ++KK G
Sbjct: 181 ALTPEQARILKLLDKPLATFKLIPLGVFSKKYG 213
>gi|380017734|ref|XP_003692802.1| PREDICTED: mRNA turnover protein 4 homolog [Apis florea]
Length = 239
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/239 (57%), Positives = 182/239 (76%), Gaps = 4/239 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEKY IF+ SV NMRN+KLKD+R++W
Sbjct: 1 MPKSKRDKKISLTKTSKKGLALKQQIVEDVRNCVEKYARIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKV+A ALGKS E+E+ +N+H +S AL+GQCGLLFTNRSK +VL W YE
Sbjct: 61 KDSRFFFGKNKVIALALGKSPENEVVENLHKLSLALRGQCGLLFTNRSKKEVLKWMREYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGFI+ E + L EGP+P+F HSIEP LRQLG+ T L KGVVTL K++TVCK G
Sbjct: 121 EIDYARSGFITQETITLPEGPIPDFSHSIEPHLRQLGMPTALQKGVVTLIKEYTVCKIGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYD---MEDDEN 236
LTPEQARILKL K +A FK++ ++KK G ++ + ++ T ++ + ME+ EN
Sbjct: 181 ALTPEQARILKLFGKPLATFKLIPLGVFSKKYG-YKQFISQDDTKENLEEQMAMEEIEN 238
>gi|392876584|gb|AFM87124.1| mRNA turnover 4-like protein [Callorhinchus milii]
gi|392877480|gb|AFM87572.1| mRNA turnover 4-like protein [Callorhinchus milii]
gi|392880138|gb|AFM88901.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/235 (57%), Positives = 176/235 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+RDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FS++NMRN+KLKD+RN W
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVMA ALGK DE ++ +H VS L G+ GLLFT+R+K++V+ WFD +
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA+SG +T V L GPL +F HS+EPQLRQLGL T+L KGVV L D+ VCK GD
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+LTPEQAR+LKLL +MA+FKV + +N + G FE L +++ ME++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSETGVFEKLAAMDESEKSSDKMEEEE 235
>gi|156544911|ref|XP_001599473.1| PREDICTED: mRNA turnover protein 4 homolog [Nasonia vitripennis]
Length = 236
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 167/221 (75%), Gaps = 1/221 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQ + ++ EKY NI +FSV+NMRN+KLKD+R +W
Sbjct: 1 MPKSKRDKKISLTKTSKKGLELKQQIVQDVRTCAEKYKNIILFSVENMRNNKLKDLRVEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ SRFFFGKNK++A ALG ++E EI + IH++SS L+GQCGL FTN K VL W Y
Sbjct: 61 RGSRFFFGKNKIVALALGTTKESEIAEGIHILSSNLQGQCGLFFTNEKKKKVLQWMREYG 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++D+A+SGF+++E +EL GPLP+F HSIEP LRQLG+ T+L KGVVTL KD+TVC +G
Sbjct: 121 EDDYARSGFVTSETIELPAGPLPDFSHSIEPHLRQLGMPTSLQKGVVTLLKDYTVCTEGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDR 221
LTPEQARILKLL + +A FK+ Y KK G + L D+
Sbjct: 181 TLTPEQARILKLLGRPLATFKLTPLGIYTKKSG-YAQLADQ 220
>gi|340720236|ref|XP_003398547.1| PREDICTED: mRNA turnover protein 4 homolog [Bombus terrestris]
Length = 242
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/242 (56%), Positives = 180/242 (74%), Gaps = 4/242 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEKY+ IF+ SV NMRN+KLKD+R++W
Sbjct: 1 MPKSKRDKKISLTKTNKKGLALKQQIVEDVRNCVEKYDRIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKV+A A GK E E + +H +S AL+GQCGLLFTNRSK +VL W + YE
Sbjct: 61 KDSRFFFGKNKVIALAFGKLPETEAAEGLHKLSLALRGQCGLLFTNRSKKEVLKWMEEYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGF++ E + L EGP+PEF HSIEP LRQLG+ T L KGVVTL KD+ VCK+G
Sbjct: 121 EIDYARSGFVAQETIVLHEGPMPEFSHSIEPHLRQLGMPTALQKGVVTLIKDYIVCKEGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLL---DREKTPMDIYDMEDDENN 237
L PEQARILKLL K +A F+++ ++KK G ++ L+ D ++ + D+E+ EN
Sbjct: 181 TLNPEQARILKLLDKPLATFRLIPLGVFSKKHG-YKQLISQHDVKENMAEQMDIEETENI 239
Query: 238 SN 239
N
Sbjct: 240 DN 241
>gi|387913858|gb|AFK10538.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 175/235 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+RDKKV+L+KT KKGLE KQN +EL K V+ Y ++F+FS++NMRN+KLKD+RN W
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNPIEELRKCVDTYKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVMA ALGK DE ++ +H VS L G+ GLLFT+R+K++V+ WFD +
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA+SG +T V L GPL +F HS+EPQLRQLGL T+L KGVV L D+ VCK GD
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSMEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+LTPEQAR+LKLL +MA+FKV + +N + G FE L +++ ME++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSETGVFEKLAAMDESEKSSDKMEEEE 235
>gi|73950287|ref|XP_544532.2| PREDICTED: mRNA turnover protein 4 homolog isoform 1 [Canis lupus
familiaris]
Length = 240
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 165/218 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS LKG+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLKGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL DH VCK+GD
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
VLTPEQAR+LKL +MA+FKV + ++ + G F+ +
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIRYMWDAQSGRFQQM 218
>gi|51316521|sp|Q9D0I8.1|MRT4_MOUSE RecName: Full=mRNA turnover protein 4 homolog
gi|12847477|dbj|BAB27585.1| unnamed protein product [Mus musculus]
gi|187950969|gb|AAI38222.1| Mrto4 protein [Mus musculus]
gi|219519534|gb|AAI45206.1| Mrto4 protein [Mus musculus]
Length = 239
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 167/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV++ ++ + G F+ + D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVIIKYMWDAQSGRFQQMDD 220
>gi|350423400|ref|XP_003493470.1| PREDICTED: mRNA turnover protein 4 homolog [Bombus impatiens]
Length = 242
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/242 (55%), Positives = 178/242 (73%), Gaps = 4/242 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEKY+ IF+ SV NMRN+KLKD+R++W
Sbjct: 1 MPKSKRDKKISLTKTNKKGLALKQQIVEDVRSCVEKYDRIFLLSVHNMRNNKLKDLRSEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKV+A A GK E E + +H +S AL+GQCGLLFTNRSK +VL W + YE
Sbjct: 61 KDSRFFFGKNKVIALAFGKLPETEAAEGLHKLSLALRGQCGLLFTNRSKKEVLKWMEEYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGF++ E + L+EGP+PEF HSIEP RQLG+ T L KGVVTL KD+ VCK+G
Sbjct: 121 EIDYARSGFVAQETIVLREGPMPEFSHSIEPHFRQLGMPTALQKGVVTLIKDYIVCKEGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDI---YDMEDDENN 237
L PEQARILKLL K +A FK + ++KK G ++ L+ + ++ D+E+ EN
Sbjct: 181 TLNPEQARILKLLDKPLATFKFIPLGIFSKKHG-YKELISQHDVKENMEEQMDIEETENI 239
Query: 238 SN 239
N
Sbjct: 240 DN 241
>gi|410919855|ref|XP_003973399.1| PREDICTED: mRNA turnover protein 4 homolog [Takifugu rubripes]
Length = 238
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 168/224 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KTVKKGLE KQ L EL + V+ Y N+F+FSV NMRNSK+KD+R W
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNSKIKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM ALGK DE N+H VS L+G+ GLLFTN++KD+V +F ++
Sbjct: 61 KHSRFFFGKNKVMIIALGKGDTDEYRDNLHKVSKQLRGEVGLLFTNKTKDEVQEYFSNFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SG + DV L EGPL +FPHS+EPQLRQLGL L KGVVTL KD+ VCK+GD
Sbjct: 121 EMDYARSGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPAALKKGVVTLLKDYEVCKQGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
VLTPEQ RILKL +MA+FKV + +N + G FEN + E++
Sbjct: 181 VLTPEQTRILKLFGIEMAEFKVQIKCMWNSETGEFENFMGEEES 224
>gi|392878188|gb|AFM87926.1| mRNA turnover 4-like protein [Callorhinchus milii]
Length = 236
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 174/235 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+RDKKV+L+KT KKGLE KQNL +EL K V+ ++F+FS++NMRN+KLKD+RN W
Sbjct: 1 MPRSRRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTCKHLFIFSIKNMRNNKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVMA ALGK DE ++ +H VS L G+ GLLFT+R+K++V+ WFD +
Sbjct: 61 KHSRFFFGKNKVMALALGKGPADEYKEGLHKVSKELSGEVGLLFTSRTKEEVIEWFDQFS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA+SG +T V L GPL +F HS EPQLRQLGL T+L KGVV L D+ VCK GD
Sbjct: 121 ENDFARSGNQATMAVTLDAGPLSQFTHSTEPQLRQLGLPTSLKKGVVVLLSDYDVCKAGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+LTPEQAR+LKLL +MA+FKV + +N + G FE L +++ ME++E
Sbjct: 181 ILTPEQARLLKLLGLEMAEFKVTISCMWNSETGVFEKLAAMDESEKSSDKMEEEE 235
>gi|194207957|ref|XP_001501832.2| PREDICTED: mRNA turnover protein 4 homolog [Equus caballus]
Length = 239
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 166/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+GQ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGQVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L+ GPL +FPHS+EPQLRQLGL T L +GVVTL DH VCK+GD
Sbjct: 121 EMDYARAGNKATFTVSLEPGPLEQFPHSMEPQLRQLGLPTALQRGVVTLLSDHEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G + + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRLQQMGD 220
>gi|301759673|ref|XP_002915673.1| PREDICTED: mRNA turnover protein 4 homolog [Ailuropoda melanoleuca]
Length = 239
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 166/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL DH VCK+GD
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGD 220
>gi|193690918|ref|XP_001952134.1| PREDICTED: mRNA turnover protein 4 homolog [Acyrthosiphon pisum]
Length = 221
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 170/222 (76%), Gaps = 4/222 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT K G + KQ++ + L +AV KY +IFVF NMRN KLKDVRN+W
Sbjct: 1 MPKSKRDKKISLTKTTKLGSKLKQSVMENLREAVNKYEHIFVFHTDNMRNGKLKDVRNEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKVM+YALGKS +DEI+ N+H ++ ++GQCGLLFTNR DDV+ WFD Y
Sbjct: 61 KDSRFFFGKNKVMSYALGKSAQDEIQTNLHKLALQIEGQCGLLFTNRPVDDVIEWFDNYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ +F ++G + V L EGPLP+ F HS+EP LRQLGL T L +GV+ + K HT+CK+G
Sbjct: 121 EPEFPRAGIRAAYTVTLDEGPLPDTFIHSMEPSLRQLGLPTTLQRGVIQVLKSHTICKEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLD 220
V+TPEQ+R+LKL KMA+FK++L Y+W K+G F LLD
Sbjct: 181 SVITPEQSRLLKLFGHKMAEFKIVLRYVW--SKDGQFRPLLD 220
>gi|296206879|ref|XP_002750411.1| PREDICTED: mRNA turnover protein 4 homolog [Callithrix jacchus]
Length = 239
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/243 (55%), Positives = 175/243 (72%), Gaps = 9/243 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVSLDSGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D D+ + + S E
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD---------DLPESASESAE 231
Query: 241 ESD 243
+S+
Sbjct: 232 DSE 234
>gi|355704498|gb|AES02247.1| mRNA turnover 4-like protein [Mustela putorius furo]
Length = 239
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 167/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+R+ W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFLFSVANMRNSKLKDIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL DH VCK+GD
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL MA+FKV + ++ + G+F+++ D
Sbjct: 181 VLTPEQARVLKLFGYAMAEFKVTIKYMWDAQSGSFQHMGD 220
>gi|47229851|emb|CAG07047.1| unnamed protein product [Tetraodon nigroviridis]
Length = 235
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 170/226 (75%), Gaps = 1/226 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KTVKKGLE KQ L EL + V+ Y N+F+FSV NMRN+K+KD+R W
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNNKIKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM ALGK DE + N+H VS L+G+ G+LFTN++KD+V +F ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKGVTDEYKDNLHKVSKQLRGEVGILFTNKTKDEVQDYFSHFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA+SG + DV L EGPL FPHS+EPQLRQLGL T+L KGVVTL KD+ VCK+GD
Sbjct: 121 EMDFARSGNQAQMDVTLDEGPLEHFPHSMEPQLRQLGLPTSLKKGVVTLLKDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPM 226
VLTPEQ RILKL +MA+FKV + +N + G FEN E+ PM
Sbjct: 181 VLTPEQTRILKLFGIEMAEFKVQIKCMWNSETGEFENFAGEEE-PM 225
>gi|149024422|gb|EDL80919.1| rCG31507, isoform CRA_b [Rattus norvegicus]
Length = 240
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 166/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMDD 220
>gi|410966282|ref|XP_003989662.1| PREDICTED: mRNA turnover protein 4 homolog [Felis catus]
Length = 238
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 175/243 (72%), Gaps = 9/243 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQAR+LKL +MA+FKV + ++ + G+F+ + + D+ + S E
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGSFQPIGE---------DLPESAPESAE 231
Query: 241 ESD 243
ES+
Sbjct: 232 ESE 234
>gi|260790436|ref|XP_002590248.1| hypothetical protein BRAFLDRAFT_254316 [Branchiostoma floridae]
gi|229275439|gb|EEN46259.1| hypothetical protein BRAFLDRAFT_254316 [Branchiostoma floridae]
Length = 238
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/226 (59%), Positives = 170/226 (75%), Gaps = 4/226 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+ T KKGLE K+NL D++ + V++Y IF FSV+NMRNSKLK+VRN W
Sbjct: 1 MPKSKRDKKISLTSTRKKGLELKRNLVDQIRECVDQYARIFTFSVENMRNSKLKEVRNVW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM+ ALG+ ED+ +N+H VS L+GQ G+ FTN++K++V+ WF Y+
Sbjct: 61 KHSRFFFGKNKVMSVALGRGAEDKYRENLHRVSQRLRGQTGMFFTNKTKEEVVEWFSQYQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+DFA+SG + + V L EGPLP+F HS+EPQLRQLGL T L +G +TL DHTVC GD
Sbjct: 121 LKDFARSGNTAVQTVVLFEGPLPQFSHSMEPQLRQLGLPTKLERGEITLISDHTVCTAGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLDREKTP 225
VLTPEQARILKLL M F + L +W N +GTFE LL+R P
Sbjct: 181 VLTPEQARILKLLDTPMVNFHITLDSVWSN--DGTFE-LLERGDKP 223
>gi|395821115|ref|XP_003783893.1| PREDICTED: mRNA turnover protein 4 homolog [Otolemur garnettii]
Length = 239
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNRSK++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRSKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAASGRFQQMGD 220
>gi|403287520|ref|XP_003934992.1| PREDICTED: mRNA turnover protein 4 homolog [Saimiri boliviensis
boliviensis]
Length = 239
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K+DV WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEDVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +F HS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNRATFTVSLDSGPLEQFSHSMEPQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSESGRFQQMGD 220
>gi|351711810|gb|EHB14729.1| mRNA turnover protein 4-like protein [Heterocephalus glaber]
Length = 239
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVFLTKTTKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRIFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATFTVSLDSGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGD 220
>gi|134085930|ref|NP_001076868.1| mRNA turnover protein 4 homolog [Bos taurus]
gi|182675532|sp|A4FV84.1|MRT4_BOVIN RecName: Full=mRNA turnover protein 4 homolog
gi|133778149|gb|AAI23853.1| MRTO4 protein [Bos taurus]
gi|296489977|tpg|DAA32090.1| TPA: mRNA turnover protein 4 homolog [Bos taurus]
gi|440892613|gb|ELR45727.1| mRNA turnover protein 4-like protein [Bos grunniens mutus]
Length = 239
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 166/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGD 220
>gi|197246024|gb|AAI68898.1| Mrto4 protein [Rattus norvegicus]
Length = 239
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 165/219 (75%)
Query: 2 PKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK 61
PKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN WK
Sbjct: 1 PKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK 60
Query: 62 DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYED 121
SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y +
Sbjct: 61 HSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTE 120
Query: 122 EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDV 181
DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GDV
Sbjct: 121 MDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDV 180
Query: 182 LTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
LTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 LTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMDD 219
>gi|5815233|gb|AAD52608.1|AF173378_1 60S acidic ribosomal protein PO [Homo sapiens]
Length = 239
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|209735134|gb|ACI68436.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 238
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/240 (55%), Positives = 174/240 (72%), Gaps = 4/240 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQNL +EL K VE Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTAKKGLETKQNLIEELRKCVEMYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N+H VS L+G+ G+LFTN++K++V +F+ ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGSTSEYKDNLHKVSRFLRGEVGVLFTNKTKEEVQEYFNQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMDFARAGNKAGMAITLDEGPLGQFPHSMEPQLRQLGLPTALKKGVVTLLKDHGVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
LTPEQARILKL +MA+F+V + +N + FE L + E + D +D E NE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVRIQCMWNSETSDFEKLAEEEA----MQDNDDKEEEGNE 236
>gi|209731538|gb|ACI66638.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|209733360|gb|ACI67549.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|303667928|gb|ADM16286.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 238
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/240 (55%), Positives = 174/240 (72%), Gaps = 4/240 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQNL +EL K VE Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTAKKGLETKQNLIEELRKCVEMYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N+H VS L+G+ G+LFTN++K++V +F+ ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGSTSEYKDNLHKVSRFLRGEVGVLFTNKTKEEVQEYFNQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMDFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHGVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
LTPEQARILKL +MA+F+V + +N + FE L + E + D +D E NE
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVRIQCMWNSETSDFEKLAEEEA----MQDNDDKEEEGNE 236
>gi|239790005|dbj|BAH71592.1| ACYPI009021 [Acyrthosiphon pisum]
Length = 221
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/222 (58%), Positives = 170/222 (76%), Gaps = 4/222 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT K G + KQ++ + L +AV KY +IFVF NMRN KLKDVRN+W
Sbjct: 1 MPKSKRDKKISLTKTTKLGSKLKQSVMENLREAVNKYEHIFVFHTDNMRNGKLKDVRNEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKVM+YALGKS +DEI+ N+H ++ ++GQCGLLFTNR DDV+ WFD Y
Sbjct: 61 KDSRFFFGKNKVMSYALGKSAQDEIQTNLHKLALQIEGQCGLLFTNRPVDDVIEWFDNYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ +F ++G + V L EGPLP+ F HS+EP LRQLGL T L +GV+ + K HT+CK+G
Sbjct: 121 EPEFPRAGIRAAYTVTLDEGPLPDTFIHSMEPSLRQLGLPTTLQRGVIQVLKSHTICKEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLD 220
V+TPEQ+R+LKL KMA+FK++L Y+W K+G F L++
Sbjct: 181 SVITPEQSRLLKLFGHKMAEFKIVLRYVW--SKDGQFWPLVE 220
>gi|156350290|ref|XP_001622223.1| predicted protein [Nematostella vectensis]
gi|156208693|gb|EDO30123.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 3/219 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V+L++T KKGLE K L E+ + V++Y ++VFSV+NMRNSKLKD R W
Sbjct: 1 MPKSKRNKIVSLTRTKKKGLELKSGLVKEVQECVDEYAFVYVFSVENMRNSKLKDAREKW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVMA ALGK+ EDE ++N+ VS LKGQCGLLFTN+SKDDV WF Y
Sbjct: 61 KQSRFFFGKNKVMAIALGKTPEDEYKENLCEVSKRLKGQCGLLFTNQSKDDVTSWFKEYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G + D +L GPL +FPHS EP LRQLGL T L KGVVTL DHTVCK+GD
Sbjct: 121 EMDFARAGNKAICDFQLDAGPLDQFPHSTEPNLRQLGLPTALKKGVVTLLSDHTVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
VLTPEQARILKL MA+F + LL W K+GTFE L
Sbjct: 181 VLTPEQARILKLFGNPMAEFHITLLCRW--SKDGTFEEL 217
>gi|432857467|ref|XP_004068695.1| PREDICTED: mRNA turnover protein 4 homolog [Oryzias latipes]
Length = 239
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 167/218 (76%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQ L +EL K V+ Y N+F+FSV+NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTTKKGLESKQKLIEELRKCVDTYRNLFIFSVENMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM ALGK DE + N+H VS L+G+ G+LFTN++KD+V +F ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKGSPDEYKDNLHKVSKFLRGEVGVLFTNKTKDEVYEYFSHFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G + DV L EGPL +FPHS+EPQLRQLGL T L KGVVTL KD+ VCK+GD
Sbjct: 121 EMDFARAGNQAQMDVTLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+LTPEQARILKL +MA+FKV + +N + F+ L
Sbjct: 181 ILTPEQARILKLFAIEMAEFKVKIKCMWNSETTEFQGL 218
>gi|426328081|ref|XP_004024831.1| PREDICTED: mRNA turnover protein 4 homolog [Gorilla gorilla
gorilla]
Length = 239
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDSGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|357628814|gb|EHJ77989.1| hypothetical protein KGM_17384 [Danaus plexippus]
Length = 245
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/243 (55%), Positives = 181/243 (74%), Gaps = 5/243 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGL KQ DE+ ++ KY +IF+F+V NMRN+KLKD+RN+W
Sbjct: 1 MPKSKRDKKVSLTKTNKKGLLLKQKTIDEIRNSLSKYEHIFLFTVDNMRNTKLKDLRNEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKVMA ALG+ + DE+E ++ +S LKGQCGLL TNR DVL WF E
Sbjct: 61 KDSRFFFGKNKVMAVALGRQKTDEVEDQLNQISKRLKGQCGLLMTNRDVPDVLEWFKNLE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+FA+SGFI+T+DV L +GPLP+F H+IEP LR+LGL T+L +GV+ L K++ VCKKG
Sbjct: 121 ATEFARSGFIATKDVILPQGPLPDFSHTIEPHLRRLGLPTSLERGVINLIKEYQVCKKGS 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
LTPEQA ILKLL +MA+FK+++ + K +G +++ + P D + D+E+N ++
Sbjct: 181 ALTPEQASILKLLGIQMAQFKIVIKCHWTKGKGFHKDI----EVPSD-EEGSDNESNKDQ 235
Query: 241 ESD 243
E +
Sbjct: 236 EDE 238
>gi|431906253|gb|ELK10450.1| mRNA turnover protein 4 like protein [Pteropus alecto]
Length = 238
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 168/221 (76%), Gaps = 2/221 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKHLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + Y+W + +G F+ + D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIKYMWDAQSKG-FQQMGD 220
>gi|348570854|ref|XP_003471211.1| PREDICTED: mRNA turnover protein 4 homolog [Cavia porcellus]
Length = 241
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 132/208 (63%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLW 207
VLTPEQAR+LKL +MA+FKV + Y+W
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMW 208
>gi|18490987|ref|NP_057267.2| mRNA turnover protein 4 homolog [Homo sapiens]
gi|114554364|ref|XP_001158877.1| PREDICTED: mRNA turnover protein 4 homolog isoform 2 [Pan
troglodytes]
gi|297666239|ref|XP_002811429.1| PREDICTED: mRNA turnover protein 4 homolog [Pongo abelii]
gi|51316541|sp|Q9UKD2.2|MRT4_HUMAN RecName: Full=mRNA turnover protein 4 homolog
gi|12804309|gb|AAH03013.1| MRNA turnover 4 homolog (S. cerevisiae) [Homo sapiens]
gi|13676344|gb|AAH06504.1| MRNA turnover 4 homolog (S. cerevisiae) [Homo sapiens]
gi|31979225|gb|AAP68821.1| acidic ribosomal protein PO-like [Homo sapiens]
gi|119615279|gb|EAW94873.1| chromosome 1 open reading frame 33, isoform CRA_a [Homo sapiens]
gi|119615281|gb|EAW94875.1| chromosome 1 open reading frame 33, isoform CRA_a [Homo sapiens]
gi|193785840|dbj|BAG51275.1| unnamed protein product [Homo sapiens]
gi|410207434|gb|JAA00936.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410260732|gb|JAA18332.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410288378|gb|JAA22789.1| mRNA turnover 4 homolog [Pan troglodytes]
gi|410353463|gb|JAA43335.1| mRNA turnover 4 homolog [Pan troglodytes]
Length = 239
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|291399405|ref|XP_002716054.1| PREDICTED: mRNA turnover 4 homolog [Oryctolagus cuniculus]
Length = 239
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/239 (56%), Positives = 174/239 (72%), Gaps = 2/239 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRN+KLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFLFSVANMRNNKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFT+R+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTDRTKEEVNEWFTKYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD--REKTPMDIYDMEDDENN 237
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D E + E+DEN+
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTITYMWDAQSGRFQQMGDDLPEGMSESATESEEDEND 239
>gi|14042338|dbj|BAB55205.1| unnamed protein product [Homo sapiens]
Length = 239
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|343962640|ref|NP_001230644.1| mRNA turnover 4 homolog [Sus scrofa]
Length = 241
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKFLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S +E N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPCEEYRDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYG 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTTLKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIRYMWDAQSGRFQEMGD 220
>gi|432098039|gb|ELK27926.1| mRNA turnover protein 4 like protein [Myotis davidii]
Length = 239
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR K++V WF +
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYKDNLHQVSKKLRGEVGLLFTNRMKEEVNEWFTKFA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMGD 220
>gi|444728090|gb|ELW68554.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 239
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 166/221 (75%), Gaps = 2/221 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPADEYRDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + Y+W + + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTMKYVW-DAQSGRFQQVGD 220
>gi|37537520|ref|NP_076025.1| mRNA turnover protein 4 homolog [Mus musculus]
gi|13543116|gb|AAH05734.1| MRT4, mRNA turnover 4, homolog (S. cerevisiae) [Mus musculus]
gi|148681356|gb|EDL13303.1| RIKEN cDNA 2610012O22, isoform CRA_a [Mus musculus]
Length = 238
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARIL L +MA+FKV++ ++ + G F+ + D
Sbjct: 181 VLTPEQARIL-LFGYEMAEFKVIIKYMWDAQSGRFQQMDD 219
>gi|148236567|ref|NP_001079849.1| mRNA turnover 4 homolog [Xenopus laevis]
gi|33585639|gb|AAH56008.1| MGC68920 protein [Xenopus laevis]
Length = 240
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/240 (56%), Positives = 175/240 (72%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y IFV SV+NMRN+KLKDVRN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKYIFVLSVENMRNNKLKDVRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM A+GK DE + N+H +S LKG+ GLLFTNR++ +V WFD Y+
Sbjct: 61 KHSRLFFGKNKVMMVAMGKGVSDEYKDNLHKLSKCLKGEVGLLFTNRTEKEVEEWFDQYK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +F HS+EPQLRQLGL T L KGV+TL D+ +CK+GD
Sbjct: 121 ETDFARAGNKATYSVVLDAGPLDQFTHSMEPQLRQLGLPTALKKGVITLLSDYDLCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQARILKL +MA+FKV + + + G F+ L + + DM+++E ++++
Sbjct: 181 VLTPEQARILKLFGFQMAEFKVSIKSIWTAETGEFQKLGGETQEKSEAEDMDEEEGDNDD 240
>gi|149262895|ref|XP_001480610.1| PREDICTED: mRNA turnover protein 4 homolog isoform 2 [Mus musculus]
Length = 239
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + ++H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDDLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+E QLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMELQLRQLGLPTALEKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIKYMWDAQSGQFQQMDD 220
>gi|94392404|ref|XP_001004798.1| PREDICTED: mRNA turnover protein 4 homolog [Mus musculus]
Length = 239
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + ++H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDDLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+E QLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMELQLRQLGLPTALEKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARILKLFGDEMAEFKVTIKYMWDAQSGRFQQMDD 220
>gi|397486739|ref|XP_003814481.1| PREDICTED: mRNA turnover protein 4 homolog [Pan paniscus]
Length = 239
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 164/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQ L +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQKLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|326932510|ref|XP_003212359.1| PREDICTED: mRNA turnover protein 4 homolog [Meleagris gallopavo]
Length = 237
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 163/218 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+KV+L++T +KGLE KQ L EL + V+ Y NIF+FSV NMRN+KLKDVRN W
Sbjct: 1 MPKSKRDRKVSLTRTPRKGLEAKQALITELRRCVDTYKNIFIFSVANMRNNKLKDVRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+ E +N+H VS L+G+ GLLFTNR+K++V WF ++
Sbjct: 61 KHSRIFFGKNKVMMVALGREPSSEYRENLHKVSKHLRGEVGLLFTNRTKEEVDEWFSSFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+LTPEQAR+LKL +MA+FKV + +N + G F+ L
Sbjct: 181 ILTPEQARVLKLFGYEMAEFKVTIKCLWNSETGDFQKL 218
>gi|158285279|ref|XP_308224.3| AGAP007644-PA [Anopheles gambiae str. PEST]
gi|157019915|gb|EAA04106.4| AGAP007644-PA [Anopheles gambiae str. PEST]
Length = 293
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 170/228 (74%), Gaps = 7/228 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT +KGL KQ + +++ + EKY+NIF+FSVQNMRNSKLKDVR +W
Sbjct: 1 MPKSKRDKKVSLTKTDRKGLSNKQQIIEDIQQCREKYDNIFLFSVQNMRNSKLKDVRAEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDE------IEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
K+SRFFFGKN+VM L +DE +E+ + + + GQCGLLFT+ SK VL
Sbjct: 61 KNSRFFFGKNRVMQLGLKLISDDENSEPTKLEQGMEQLREQMIGQCGLLFTSESKKTVLE 120
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
WFD Y+ E+FA+ GF +T+ V+LK GPL EF H+IEP LR LG+ T L++G+VTL+K+ T
Sbjct: 121 WFDTYQAEEFARGGFRATKTVKLKPGPLEEFSHAIEPHLRSLGMPTKLDRGIVTLYKEFT 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
VC+KG VLTPEQARILKLL K MA FK+++ Y KK+G FE + RE
Sbjct: 181 VCEKGKVLTPEQARILKLLNKPMATFKLIINCCYTKKDG-FEEITKRE 227
>gi|405950097|gb|EKC18102.1| mRNA turnover protein 4-like protein [Crassostrea gigas]
Length = 335
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 170/222 (76%), Gaps = 3/222 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L++T KKGLE KQ + +++ +KY +IF+FSV NMRN+ LK+VR W
Sbjct: 1 MPKSKRDKKVSLTQTKKKGLEFKQKIIEDVQTCCDKYKHIFLFSVHNMRNTHLKEVRQSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
SRF+FGKNKVMA ALG++QEDE + N+H +S+ L+GQ GLLFTN+SK +VL +FD Y
Sbjct: 61 SGSRFYFGKNKVMALALGRTQEDEYKDNLHKLSNQLRGQSGLLFTNKSKKEVLSYFDNYR 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
DFA+SG + + V L EGP+PEF HS+EPQLRQLGL T L KGVVTL K+HTVC++G+
Sbjct: 121 VADFARSGNVCQQTVMLDEGPIPEFSHSMEPQLRQLGLPTCLQKGVVTLLKNHTVCEQGN 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLDR 221
+LTPEQARILKL KMA+F V + +W + G +E + DR
Sbjct: 181 ILTPEQARILKLFGYKMAEFFVTIEGMWSS--NGKWEAIADR 220
>gi|126328547|ref|XP_001377938.1| PREDICTED: mRNA turnover protein 4 homolog [Monodelphis domestica]
Length = 242
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+R+ W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+ DE + N+H VS L+G+ GLLF+NR+K +V WF Y
Sbjct: 61 KHSRIFFGKNKVMMVALGRGPTDEYKDNLHQVSKKLRGEVGLLFSNRTKKEVNEWFSKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKATFTVSLDAGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYQVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
VLTPEQAR+LKL +MA+F+V + YLW + G FE+L
Sbjct: 181 VLTPEQARVLKLFGFEMAEFRVNIKYLW-QAESGKFEHL 218
>gi|344283447|ref|XP_003413483.1| PREDICTED: mRNA turnover protein 4 homolog [Loxodonta africana]
Length = 239
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 164/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF +
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKFT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EMDYARAGNKAMFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + ++ + FE + D
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIKYVWDAQSRRFEQMGD 220
>gi|50759402|ref|XP_425751.1| PREDICTED: mRNA turnover protein 4 homolog [Gallus gallus]
Length = 242
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 164/219 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+KV+L++T +KGLE KQ L EL + V+ Y +IF+FSV NMRN+KLKDVRN W
Sbjct: 1 MPKSKRDRKVSLTRTPRKGLEAKQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+ E +N+H VS L+G+ GLLFTNR+K++V WF ++
Sbjct: 61 KHSRIFFGKNKVMMVALGREPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 121 EVDFARAGNKATYTVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLL 219
+LTPEQAR+LKL +MA+FKV + +N + G F+ L+
Sbjct: 181 ILTPEQARVLKLFGYEMAEFKVTIKFLWNSETGDFQKLV 219
>gi|388454320|ref|NP_001253352.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|380813380|gb|AFE78564.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|380813382|gb|AFE78565.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|383410013|gb|AFH28220.1| mRNA turnover protein 4 homolog [Macaca mulatta]
gi|384947448|gb|AFI37329.1| mRNA turnover protein 4 homolog [Macaca mulatta]
Length = 239
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 163/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTN +K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 220
>gi|348534184|ref|XP_003454583.1| PREDICTED: mRNA turnover protein 4 homolog [Oreochromis niloticus]
Length = 239
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 166/224 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQ L EL + V+ Y N+F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTAKKGLESKQKLIQELRECVDTYRNLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM ALGK DE + N+H V L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMIVALGKRDTDEYKDNLHKVGKHLRGEVGVLFTNKTKEEVQEYFSHFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + DV L EGPL +F HS+EPQLRQLGL T L KGVVTL KD+ VCK+GD
Sbjct: 121 EVDYARAGNQAQMDVTLDEGPLEQFTHSMEPQLRQLGLPTALKKGVVTLLKDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
LTPEQARILKL +MA+FKV + +N + G FEN E++
Sbjct: 181 TLTPEQARILKLFGIEMAEFKVQIKCMWNSETGEFENFAGEEES 224
>gi|354489567|ref|XP_003506933.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 239
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 163/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G +T V L GPL +F HS EPQLR+LGL L KGVVTL D+ VCK+GD
Sbjct: 121 EMDFARAGNKATLTVSLNPGPLKQFLHSTEPQLRRLGLPIALKKGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMDD 220
>gi|355557609|gb|EHH14389.1| hypothetical protein EGK_00309 [Macaca mulatta]
Length = 239
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 164/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTN +K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+++ D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKHMWDSQLGRFQHMGD 220
>gi|52346144|ref|NP_001005116.1| mRNA turnover 4 homolog [Xenopus (Silurana) tropicalis]
gi|50369173|gb|AAH77055.1| MGC89995 protein [Xenopus (Silurana) tropicalis]
gi|89267864|emb|CAJ82998.1| novel protein [Xenopus (Silurana) tropicalis]
Length = 240
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 133/220 (60%), Positives = 163/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y I+V SV+NMRN+KLKDVRN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLEVKQNLIEELRKCVDTYKYIYVLSVENMRNNKLKDVRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALGK DE + N+H +S LKG+ GLLFTNR++ +V WFD ++
Sbjct: 61 KHSRLFFGKNKVMMVALGKGVSDEYKDNLHKLSKCLKGEVGLLFTNRTEKEVKEWFDQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
D DFA++G +T V L GPL +F HS+EPQLRQLGL T L KGV+TL D+ VCK+GD
Sbjct: 121 DMDFARAGNKATYAVVLDAGPLEQFTHSMEPQLRQLGLPTALKKGVITLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQARILKL +MA+FKV + + + G F+ D
Sbjct: 181 VLTPEQARILKLFSFQMAEFKVSIKSIWTAETGEFQKFGD 220
>gi|355744968|gb|EHH49593.1| hypothetical protein EGM_00282 [Macaca fascicularis]
Length = 239
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/243 (55%), Positives = 172/243 (70%), Gaps = 9/243 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV +MRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDIYKYLFIFSVAHMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTN +K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNCTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D VCK+GD
Sbjct: 121 EMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQARILKL +MA+FKV + ++ + G F+ + D D+ + + S E
Sbjct: 181 VLTPEQARILKLFGYEMAEFKVTIKHMWDSQLGRFQQMGD---------DLPESASESAE 231
Query: 241 ESD 243
+SD
Sbjct: 232 KSD 234
>gi|332374122|gb|AEE62202.1| unknown [Dendroctonus ponderosae]
Length = 230
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 167/218 (76%), Gaps = 1/218 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + D++ VEK+ NI++F+ +NMRN K+K+VR W
Sbjct: 1 MPKSKRDKKISLTKTSKKGLSLKQKIVDDVRNCVEKFQNIYIFTFRNMRNEKMKEVREQW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKV+A LG+S+ +E+E +H +S +LKGQCGLLFT+ +K +V WFD Y
Sbjct: 61 KPSRFFFGKNKVIAIGLGRSEAEEVEDGLHELSKSLKGQCGLLFTDCTKKEVTEWFDDYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
EDFA+SG +TE + L EGPL +F H+IEP LRQLG+ T L++GVVTL KD VCK+G
Sbjct: 121 VEDFARSGCKATETIALSEGPLKQFSHAIEPYLRQLGMPTKLDRGVVTLIKDFEVCKEGS 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+LTPEQA+IL+LL+ K+A FK++L + K EG FE +
Sbjct: 181 ILTPEQAKILELLENKLATFKLILTGRWTKGEG-FEKI 217
>gi|225716882|gb|ACO14287.1| mRNA turnover protein 4 homolog [Esox lucius]
Length = 239
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 174/238 (73%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV+NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTTKKGLETKQNLIEELRKCVDIYKHLFIFSVENMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N+H V+ LKG+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLHKVTRFLKGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA++G + V L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMDFARAGNKAEMAVTLDEGPLEQFPHSMEPQLRQLGLPTALRKGVVTLLKDHDVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNS 238
LTPEQARILKL ++A+F+V + +N + FE L + E+ + D +D E +
Sbjct: 181 TLTPEQARILKLFGIELAEFRVQVKCMWNSETCDFEKLTEEEEEDEAMQDNDDKEGDG 238
>gi|62955283|ref|NP_001017657.1| mRNA turnover protein 4 homolog [Danio rerio]
gi|62204420|gb|AAH92913.1| Zgc:110388 [Danio rerio]
Length = 242
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 165/220 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGLE KQNL +EL K + Y +FVFSV+NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTTKKGLEAKQNLIEELRKCADIYRYVFVFSVENMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ SRFFFGKNKVM ALGK DE + N+H +S L+G+ G+LFTN++KD+V +F ++
Sbjct: 61 RHSRFFFGKNKVMMIALGKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G ++ V L EGPL +FPHS+EPQLRQLGL T L KG VTL KD VCK+GD
Sbjct: 121 EVDYARAGNTASMAVTLDEGPLDQFPHSMEPQLRQLGLPTALKKGAVTLIKDFEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
LTPEQARILKL +MA+FK+ + +N + G FE L D
Sbjct: 181 TLTPEQARILKLFGFEMAEFKLSIKCMWNSESGEFEKLTD 220
>gi|417409058|gb|JAA51053.1| Putative protein involved in mrna turnover, partial [Desmodus
rotundus]
Length = 253
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 163/220 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRNSKLK +R+ W
Sbjct: 13 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKHLFIFSVANMRNSKLKAIRHAW 72
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFT+R+K++V WF Y
Sbjct: 73 KHSRMFFGKNKVMMVALGRSPCDEYKDNLHQVSKKLRGEVGLLFTDRTKEEVNEWFTKYT 132
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 133 EMDYARAGNKAPFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD 192
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+LTPEQARILKL +MA+FKV + ++ G F + D
Sbjct: 193 LLTPEQARILKLFGYEMAEFKVTIKYMWDAHSGRFHQMGD 232
>gi|307186412|gb|EFN72046.1| mRNA turnover protein 4-like protein [Camponotus floridanus]
Length = 244
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 166/218 (76%), Gaps = 5/218 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGL KQ + +++ K VE YN IF+ SVQN RN+KL ++R +W
Sbjct: 1 MPKSKRDKKVSLTKTNKKGLVLKQRIIEDVKKCVEDYNRIFLISVQNTRNTKLLELRTEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA-----LKGQCGLLFTNRSKDDVLMW 115
DSR FFGK +++A LGK++E E+ IH +++A +KGQCGLLFTNRSK +V+ W
Sbjct: 61 NDSRLFFGKLRIIALGLGKTRETEVADGIHKLANAIKNHSMKGQCGLLFTNRSKKEVIEW 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
+ YE+ ++A+SGF++ E +EL EGPLP+F HS+EPQLRQLG+ T+L KG++TL K V
Sbjct: 121 AEKYEEMEYARSGFVTPETIELPEGPLPQFQHSMEPQLRQLGMPTSLQKGIITLIKPFRV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
C+K DVLTPEQA+ILKLL K +A FK+LL Y KK G
Sbjct: 181 CQKNDVLTPEQAQILKLLDKPLAVFKLLLLGIYTKKHG 218
>gi|321463281|gb|EFX74298.1| hypothetical protein DAPPUDRAFT_307342 [Daphnia pulex]
Length = 240
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/243 (50%), Positives = 184/243 (75%), Gaps = 5/243 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPK+KR +K++L++T KKGL KQ L +++ VEKY+ +++FSVQNMR++KLK +RN+W
Sbjct: 1 MPKTKRFQKISLTQTKKKGLGGKQQLVEDIRSCVEKYSYLYLFSVQNMRSNKLKSIRNEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFF GKN+V+A ALG+++E E +N+H VS LKGQCG++FT++ K +V+ +F +
Sbjct: 61 KDSRFFLGKNRVIAIALGRTKESESRENLHEVSKRLKGQCGIVFTDKPKSEVIRYFQKHV 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SG ++TE V L+ GPL +FP ++EP LRQLGL T+L +GVVTL K+HTVCK+G
Sbjct: 121 ESDYARSGNVATETVTLQPGPLEQFPFNMEPYLRQLGLPTSLQRGVVTLLKEHTVCKEGS 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
+LTPE+AR+LKLL K MA+F+V + + K++G FE++ + + + EDD N S +
Sbjct: 181 ILTPEEARLLKLLCKHMAEFRVTIEAVWEKEDGAFEDIGNGR-----MLEKEDDANESAD 235
Query: 241 ESD 243
+ +
Sbjct: 236 DEN 238
>gi|443721008|gb|ELU10513.1| hypothetical protein CAPTEDRAFT_156508 [Capitella teleta]
Length = 263
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/219 (57%), Positives = 164/219 (74%), Gaps = 3/219 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L++T KKGLE KQ L +++ V++Y IF+FSVQNMRN+ LKDVR +W
Sbjct: 1 MPKSKRDKKISLTQTNKKGLELKQKLIEDIHNCVDQYARIFLFSVQNMRNTHLKDVRQEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM++ALG++ E E +H ++ L+GQ GLLFTN +K++V+ WF+ Y
Sbjct: 61 KHSRFFFGKNKVMSFALGQTPETEYRDALHKLTRKLQGQVGLLFTNSTKEEVIAWFEKYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFA+SG +T+ V + EGPL F HS+EPQLRQLGL T L KGVVTL +++ VCK G
Sbjct: 121 EPDFARSGNEATQTVTIDEGPLASFSHSMEPQLRQLGLPTTLKKGVVTLTQNYEVCKLGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLY-LWYNKKEGTFENL 218
LTPEQARILKL KMA F V + LW N +G+FE L
Sbjct: 181 TLTPEQARILKLFDYKMANFAVSIEGLWSN--DGSFETL 217
>gi|195122132|ref|XP_002005566.1| GI18999 [Drosophila mojavensis]
gi|193910634|gb|EDW09501.1| GI18999 [Drosophila mojavensis]
Length = 259
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 173/244 (70%), Gaps = 14/244 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ VEKY NIFVF VQNMRN+ LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN++M LG+++ +E+EK IH +S L GQ GLLFT +SK++VL W D Y
Sbjct: 61 KQNSRFIFGKNRIMQIGLGRTKAEEVEKGIHKLSKRLTGQVGLLFTEKSKEEVLKWADKY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF +TE V L GPL EF HS+EP LR LGL T L KG+VTL+ D+TVC+KG
Sbjct: 121 WAVEYARSGFTATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEKG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSN 239
VLTPEQARILKLL K MAKF++ + + K +G F+ ++DDE N
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKADG-FQ------------LHVKDDEQEPN 227
Query: 240 EESD 243
+E+D
Sbjct: 228 KETD 231
>gi|209735258|gb|ACI68498.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 239
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 164/218 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N++ VS L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMNFARAGNKAGMAIALDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + FE L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFEKL 218
>gi|209733118|gb|ACI67428.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|223646444|gb|ACN09980.1| mRNA turnover protein 4 homolog [Salmo salar]
gi|223672291|gb|ACN12327.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 239
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 164/218 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N++ VS L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + FE L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFEKL 218
>gi|209730936|gb|ACI66337.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 163/218 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N++ VS L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK GD
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKGGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + FE L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFEKL 218
>gi|157114505|ref|XP_001652303.1| mrna turnover protein 4 mrt4 [Aedes aegypti]
gi|108877246|gb|EAT41471.1| AAEL006887-PA [Aedes aegypti]
Length = 290
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/227 (55%), Positives = 170/227 (74%), Gaps = 6/227 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+KV+L+KT +KGL KQ + +++ + +KY+N+F+FSVQNMRN+KLKDVR W
Sbjct: 1 MPKSKRDQKVSLTKTDRKGLSNKQQIIEDIQECRQKYDNVFLFSVQNMRNAKLKDVRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQED-----EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
K+SRFFFGKN+VM L +D ++E+++ + + GQCGLLFT+ SK+ VL W
Sbjct: 61 KNSRFFFGKNRVMQLGLKFVSDDADEDPKLEQDLEKLREQMIGQCGLLFTSESKETVLDW 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
FD Y ++FA+SGF +T+ + LKEGPL EF H+IEP LR LG+ T L +G+VTL+K+ TV
Sbjct: 121 FDSYSADEFARSGFRATKTIRLKEGPLEEFSHAIEPHLRSLGMPTKLERGIVTLYKEFTV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
C+KG VLTPEQARILKLL K MAKFKV++ Y K+ G FE + R+
Sbjct: 181 CEKGKVLTPEQARILKLLGKPMAKFKVIINCCYTKENG-FEEIKKRD 226
>gi|209733238|gb|ACI67488.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 163/218 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNK M A+GK E + N++ VS L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKAMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH VCK+GD
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + FE L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFEKL 218
>gi|61654606|gb|AAX48829.1| PO-like [Suberites domuncula]
Length = 228
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 161/216 (74%), Gaps = 3/216 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ +TLSKT KG E K L E+ +V+KY N+FV+S+ NMRN+KLKD+R +W
Sbjct: 1 MPKSKRNRVLTLSKTRSKGHELKSGLLQEIRDSVDKYANLFVYSIDNMRNAKLKDLRTEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKN+VM ALG+S+ DE + +H VS L G GL FTN + V WFD +
Sbjct: 61 KDSRFFFGKNRVMQLALGRSESDEYKTGLHYVSEQLNGAVGLFFTNEPTEKVEKWFDNFS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGFISTE++ EGPL +F H++EPQLR+LGL T L KG VTL +D+TVC +GD
Sbjct: 121 ENDYARSGFISTEEIVCSEGPLTQFTHNMEPQLRKLGLPTALKKGEVTLREDYTVCTEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTF 215
VL+PEQARILKLL KMA FKV L+ +W N +G+F
Sbjct: 181 VLSPEQARILKLLDIKMASFKVNLICVWSN--DGSF 214
>gi|209731550|gb|ACI66644.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 162/218 (74%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N++ VS L+G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFLRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KG VTL KDH VCK+GD
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGAVTLLKDHDVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + E L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDLEKL 218
>gi|119615280|gb|EAW94874.1| chromosome 1 open reading frame 33, isoform CRA_b [Homo sapiens]
Length = 425
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 156/211 (73%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
V+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN WK SR FFGK
Sbjct: 196 VSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGK 255
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
NKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y + D+A++G
Sbjct: 256 NKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGN 315
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+ V L GPL +FPHS+EPQLRQLGL T L +GVVTL D+ VCK+GDVLTPEQAR+
Sbjct: 316 KAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARV 375
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
LKL +MA+FKV + ++ + G F+ + D
Sbjct: 376 LKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 406
>gi|170045469|ref|XP_001850330.1| mRNA turnover protein 4 [Culex quinquefasciatus]
gi|167868504|gb|EDS31887.1| mRNA turnover protein 4 [Culex quinquefasciatus]
Length = 282
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 170/230 (73%), Gaps = 9/230 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT +KGL KQ + +++ + +KY+NIF+FSVQNMRNSKLKD+R W
Sbjct: 1 MPKSKRDKKISLTKTDRKGLSNKQQIIEDIRECRQKYDNIFLFSVQNMRNSKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALG--------KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDV 112
K+SRFFFGKN+VM L + + ++ K++ + + GQCGLLFT+ +K+ V
Sbjct: 61 KNSRFFFGKNRVMQLGLDFVSDEGEDGAADPKLGKDLEKLREQMVGQCGLLFTSETKETV 120
Query: 113 LMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
L WFD Y ++FA+SGF +T+ V LKEGPL EF H+IEP LR LG+ T L+KGVVTL+K+
Sbjct: 121 LDWFDSYSADEFARSGFRATKKVHLKEGPLEEFSHAIEPHLRSLGMPTKLDKGVVTLYKE 180
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
TVC+KG VL+PEQARILKLL K MAKFKV++ Y K+G FE + R+
Sbjct: 181 FTVCEKGKVLSPEQARILKLLGKPMAKFKVIINCAY-LKDGGFEEINKRD 229
>gi|194754443|ref|XP_001959504.1| GF12908 [Drosophila ananassae]
gi|190620802|gb|EDV36326.1| GF12908 [Drosophila ananassae]
Length = 258
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 162/214 (75%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ VEKY NIFVF VQNMRN+ LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+ + +E+E ++H +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRKKSEEVEPDLHKLSKRLTGQVGLLFTDKSKEEVLKWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL EF HS+EP LR LGL T L KGVVT++ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVTLAAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKLL K MAKF++ + + K EG
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKAEG 214
>gi|198420934|ref|XP_002129870.1| PREDICTED: similar to ribosomal protein P0-like protein [Ciona
intestinalis]
Length = 273
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 169/251 (67%), Gaps = 10/251 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDK+++L++T K GLE KQNL E+ VEKY+ IFVFSV NMRNSKLK+VRN W
Sbjct: 1 MPKSKRDKRISLTQTKKGGLEAKQNLVTEVRNCVEKYDRIFVFSVCNMRNSKLKEVRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVMA A G+S E EI ++ S+ L + G+LFT++SK+DV+ WFD Y
Sbjct: 61 KHSRFFFGKNKVMALAFGRSPETEIMNGLYKFSTKLVNEVGVLFTSKSKEDVVDWFDKYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++G I+T VEL EGPL +F H+IEP LR+LGL L KGVVT+ + HTVCK+ +
Sbjct: 121 EHDYARTGNIATSTVELDEGPLVQFSHAIEPHLRKLGLPVALKKGVVTMLQSHTVCKENE 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPM----------DIYD 230
LT EQA++LKLLK M++F + L + K G +EK M +YD
Sbjct: 181 KLTAEQAKVLKLLKIVMSQFSIHLQCMWEKDSGECSVFDVKEKEVMFNKVRVTTDDQVYD 240
Query: 231 MEDDENNSNEE 241
+ E N E
Sbjct: 241 YVESEQKENME 251
>gi|195026361|ref|XP_001986239.1| GH20636 [Drosophila grimshawi]
gi|193902239|gb|EDW01106.1| GH20636 [Drosophila grimshawi]
Length = 247
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 159/214 (74%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ VEKY NIFVF VQNMRN+ LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN++M LG+++ +E+E IH +S L GQ GLLFT +SK DVL W + Y
Sbjct: 61 KQNSRFIFGKNRIMQIGLGRTKAEEVETGIHKLSKRLSGQVGLLFTEKSKADVLAWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF +TE V L GPL EF HS+EP LR LGL T L KGVVT++ D+TVC++G
Sbjct: 121 WAVEYARSGFAATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
+LTPEQARILKLL K MAKF++ + + K +G
Sbjct: 181 KILTPEQARILKLLGKPMAKFRLTMKCSWTKDDG 214
>gi|195551694|ref|XP_002076278.1| GD15262 [Drosophila simulans]
gi|194201927|gb|EDX15503.1| GD15262 [Drosophila simulans]
Length = 256
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 161/214 (75%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+++ +E+E +H +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL +F HS+EP LR LGL T L KG+VTL+ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K EG
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEG 214
>gi|195333033|ref|XP_002033196.1| GM20550 [Drosophila sechellia]
gi|194125166|gb|EDW47209.1| GM20550 [Drosophila sechellia]
Length = 252
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 161/214 (75%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+++ +E+E +H +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL +F HS+EP LR LGL T L KG+VTL+ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVNLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K EG
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEG 214
>gi|195475256|ref|XP_002089900.1| GE21775 [Drosophila yakuba]
gi|194176001|gb|EDW89612.1| GE21775 [Drosophila yakuba]
Length = 254
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/244 (52%), Positives = 173/244 (70%), Gaps = 7/244 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+ + +E+E +H +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRKKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL +F HS+EP LR LGL T L KG+VTL+ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSN 239
VLTPEQARILKL+ K MAKF++ + + K EG ++ D D+ D E ++
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKGEGFQLHVED------DLNDEEQADSAME 234
Query: 240 EESD 243
EE++
Sbjct: 235 EEAE 238
>gi|209738054|gb|ACI69896.1| mRNA turnover protein 4 homolog [Salmo salar]
Length = 240
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 161/218 (73%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y ++F+FSV NMRN+KLKD+R W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLETKQNLIEELRKCVDIYKHLFIFSVANMRNNKLKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM A+GK E + N++ VS +G+ G+LFTN++K++V +F ++
Sbjct: 61 KHSRFFFGKNKVMMIAIGKGPTSEYKDNLYKVSRFPRGEVGVLFTNKTKEEVQEYFSQFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ +FA++G + + L EGPL +FPHS+EPQLRQLGL T L KGVVTL KDH K+GD
Sbjct: 121 EMNFARAGNKAGMAITLDEGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLKDHDARKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
LTPEQARILKL +MA+F+V + +N + FE L
Sbjct: 181 TLTPEQARILKLFGIEMAEFRVQIKCMWNSETSDFEKL 218
>gi|195384319|ref|XP_002050865.1| GJ19965 [Drosophila virilis]
gi|194145662|gb|EDW62058.1| GJ19965 [Drosophila virilis]
Length = 259
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ VEKY NIFVF VQNMRN+ LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN++M LG+++ +E+E IH +S L GQ GLLFT ++K++VL W + Y
Sbjct: 61 KRNSRFIFGKNRIMQIGLGRTKAEEVETGIHKLSKRLTGQVGLLFTEKTKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF +TE V L GPL EF HS+EP LR LGL T L KGVVT++ D+TVC++G
Sbjct: 121 WAVEYARSGFKATETVTLPAGPLEEFAHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKLL K MAKF++ + + K +G
Sbjct: 181 KVLTPEQARILKLLGKPMAKFRLTMKCSWTKADG 214
>gi|355757478|gb|EHH61003.1| hypothetical protein EGM_18916 [Macaca fascicularis]
Length = 239
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/243 (51%), Positives = 166/243 (68%), Gaps = 9/243 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR KKV+L+KT KGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD++N W
Sbjct: 1 MPKSKRHKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNK M A G+S E + N++ VS L+G+ G LFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMGFLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D ++G +T V L GPL +FPHS++ QLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDNTRAGNKATFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQAR+LKL +MA+FKV + ++ + G F+ + D D+ + + S E
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKYMWDSQLGRFQQMGD---------DLPESASESAE 231
Query: 241 ESD 243
+SD
Sbjct: 232 KSD 234
>gi|395521753|ref|XP_003764980.1| PREDICTED: mRNA turnover protein 4 homolog [Sarcophilus harrisii]
Length = 240
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
++L+KT KKGLE KQNL EL K V+ Y +F+FSV NMRNSKLKD+RN WK SR FFGK
Sbjct: 8 LSLTKTAKKGLELKQNLIGELRKCVDVYKYLFIFSVANMRNSKLKDIRNAWKHSRIFFGK 67
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
NKVM ALG+ DE + N+H VS L+G+ GLLFTNR+K +V WF Y + D+A++G
Sbjct: 68 NKVMMVALGRGPADEYKDNLHQVSKKLRGEVGLLFTNRTKKEVNEWFSKYTEMDYARAGN 127
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+T V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GDVLTPEQAR+
Sbjct: 128 KATFTVGLDAGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYQVCKEGDVLTPEQARV 187
Query: 190 LKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
LKL +MA+F+V + YLW + G FE+L
Sbjct: 188 LKLFGFEMAEFRVNIKYLW-QAESGKFEHL 216
>gi|194858067|ref|XP_001969094.1| GG25231 [Drosophila erecta]
gi|190660961|gb|EDV58153.1| GG25231 [Drosophila erecta]
Length = 255
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 161/214 (75%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+++ +E+E ++ +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELYKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL +F HS+EP LR LGL T L KG+VTL+ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K EG
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEG 214
>gi|224080416|ref|XP_002190007.1| PREDICTED: mRNA turnover protein 4 homolog [Taeniopygia guttata]
Length = 233
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 153/210 (72%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
++L++T +KGLE KQ L EL + V+ Y IFVFSV NMRNSKLKDVRN WK SR FFGK
Sbjct: 5 LSLTRTPRKGLEAKQALIAELRRCVDTYKYIFVFSVANMRNSKLKDVRNAWKHSRIFFGK 64
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
NKVM ALG+ E ++N+H VS L+G+ GLLFTNR++D+V WF + + DFA++G
Sbjct: 65 NKVMMVALGREPSSEYKENLHKVSKHLRGEVGLLFTNRTRDEVDEWFSKFRELDFARAGN 124
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+ V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GDVLTPEQAR+
Sbjct: 125 RAPYGVSLDTGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARV 184
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLL 219
LKL +MA+FKV + +N + G F+ L+
Sbjct: 185 LKLFGYEMAEFKVTMKFLWNSETGDFQKLM 214
>gi|109131259|ref|XP_001096594.1| PREDICTED: mRNA turnover protein 4 homolog [Macaca mulatta]
Length = 239
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 166/243 (68%), Gaps = 9/243 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD++N W
Sbjct: 1 MPKSKRDKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNK M A G+S E + N++ VS L+G+ LFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMSFLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D ++G + V L GPL +FPHS++ QLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDNTRAGNKAAFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQAR+LKL +MA+FKV + ++ + G F+++ D D+ + + S E
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKHMWDSQLGRFQHMGD---------DLPESASESAE 231
Query: 241 ESD 243
+SD
Sbjct: 232 KSD 234
>gi|195430430|ref|XP_002063258.1| GK21826 [Drosophila willistoni]
gi|194159343|gb|EDW74244.1| GK21826 [Drosophila willistoni]
Length = 250
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ VEKY NIFVF VQNMRN+ LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIIDDIRFCVEKYPNIFVFQVQNMRNNLLKDLRQEW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN++M LG+++ +E E ++H +S L GQ GLLFT ++K +VL W + Y
Sbjct: 61 KKNSRFIFGKNRIMQIGLGRTKAEETETDLHKLSKRLTGQVGLLFTEKTKKEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++T+ V L GPL EF HS+EP LR LGL T L KGVVT++ D+TVC++G
Sbjct: 121 WAVEYARSGFVATKTVTLPAGPLEEFTHSMEPHLRSLGLPTKLEKGVVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKLL MAKF++ + + KK+G
Sbjct: 181 KVLTPEQARILKLLGDPMAKFRLTMKCSWTKKDG 214
>gi|19921958|ref|NP_610554.1| ribosomal protein LP0-like [Drosophila melanogaster]
gi|7303797|gb|AAF58844.1| ribosomal protein LP0-like [Drosophila melanogaster]
gi|16769692|gb|AAL29065.1| LD47064p [Drosophila melanogaster]
gi|220944390|gb|ACL84738.1| CG1381-PA [synthetic construct]
gi|220954266|gb|ACL89676.1| CG1381-PA [synthetic construct]
Length = 256
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ + D++ V KY NIFVF VQNMRNS LKD+R +
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQEL 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRF FGKN+VM LG+++ +E+E +H +S L GQ GLLFT++SK++VL W + Y
Sbjct: 61 KKNSRFIFGKNRVMQIGLGRTKSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGF++TE V L GPL +F HS+EP LR LGL T L KG+VTL+ D+TVC++G
Sbjct: 121 WAVEYARSGFVATETVTLPAGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K EG
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRLTMKCSWTKSEG 214
>gi|91091562|ref|XP_967054.1| PREDICTED: similar to CG1381 CG1381-PA [Tribolium castaneum]
gi|270000914|gb|EEZ97361.1| hypothetical protein TcasGA2_TC011183 [Tribolium castaneum]
Length = 234
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 170/243 (69%), Gaps = 10/243 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT KKGL KQ + +++ VEK+++I+VF+ +NMRN +KDVR W
Sbjct: 1 MPKSKRDKKISLTKTDKKGLALKQKIVEDVRNCVEKFSSIYVFTYRNMRNELMKDVREQW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKV+ LG+++E+E+ ++H +S LKGQC LLFT+ KD+V+ WF+ Y
Sbjct: 61 KPSRFFFGKNKVIGVGLGRNKEEEVADDLHKLSRCLKGQCALLFTDSPKDEVIEWFESYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
EDFA+SG + + V L EG L +FPHS+EP LRQLG+ T L +GVVTL K+ VCK+G
Sbjct: 121 CEDFARSGCVVDKTVTLPEGALKQFPHSMEPYLRQLGMPTKLERGVVTLIKEFEVCKEGG 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSNE 240
VLTPEQA+IL+ L ++A FK+ L + K G FE L + ED++ N NE
Sbjct: 181 VLTPEQAKILEFLGHRLAVFKLDLRAAWIKGSG-FERLDGKS---------EDNDENMNE 230
Query: 241 ESD 243
+ D
Sbjct: 231 DED 233
>gi|355704929|gb|EHH30854.1| hypothetical protein EGK_20651 [Macaca mulatta]
Length = 239
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD++N W
Sbjct: 1 MPKSKRDKKVSLTKTANKGLELKQNLMEELRKCVDTYKYLFIFSVANMRNSKLKDIQNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNK M A G+S E + N++ VS L+G+ LFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKAMMVAFGRSPSGEYKDNLYQVSKRLRGEMSFLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D ++G + V L GPL +FPHS++ QLRQLGL T L +GVVTL D+ VCK+GD
Sbjct: 121 EMDNTRAGNKAAFTVSLDPGPLEQFPHSMQSQLRQLGLPTTLKRGVVTLLSDYEVCKEGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
VLTPEQAR+LKL +MA+FKV + ++ + G F+++ D
Sbjct: 181 VLTPEQARVLKLFGYEMAEFKVTIKHMWDSQLGRFQHMGD 220
>gi|195154685|ref|XP_002018252.1| GL16862 [Drosophila persimilis]
gi|194114048|gb|EDW36091.1| GL16862 [Drosophila persimilis]
Length = 251
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRFVDDIRFCVGKYPNIFVFQVQNMRNSILKDLRQEW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SR FGKN+VM LG+++ +E+E +H ++ L GQ GLLFT +SK++VL W + Y
Sbjct: 61 KNNSRIIFGKNRVMQIGLGRTKSEEMEAGLHKLAKRLNGQVGLLFTEKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGFI+TE V L GPL +F HS+EP LR LG+ T L KG+VT++ D+TVC++G
Sbjct: 121 WAVEYARSGFIATETVTLPAGPLEDFAHSMEPHLRSLGMPTKLEKGIVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K +G
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRMTIQCSWTKSDG 214
>gi|125809406|ref|XP_001361102.1| GA12545 [Drosophila pseudoobscura pseudoobscura]
gi|54636275|gb|EAL25678.1| GA12545 [Drosophila pseudoobscura pseudoobscura]
Length = 252
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDKKV+L+KT +KGL KQ D++ V KY NIFVF VQNMRNS LKD+R +W
Sbjct: 1 MPRSKRDKKVSLTKTDRKGLAWKQRFVDDIRFCVGKYPNIFVFQVQNMRNSILKDLRQEW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SR FGKN+VM LG+++ +E+E +H ++ L GQ GLLFT +SK++VL W + Y
Sbjct: 61 KNNSRIIFGKNRVMQIGLGRTKSEEMEAGLHKLAKRLNGQVGLLFTEKSKEEVLEWAENY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++A+SGFI+TE V L GPL +F HS+EP LR LG+ T L KG+VT++ D+TVC++G
Sbjct: 121 WAVEYARSGFIATETVTLPAGPLEDFAHSMEPHLRSLGMPTKLEKGIVTIYSDYTVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VLTPEQARILKL+ K MAKF++ + + K +G
Sbjct: 181 KVLTPEQARILKLVGKPMAKFRMTIQCSWTKSDG 214
>gi|345319424|ref|XP_001515818.2| PREDICTED: mRNA turnover protein 4 homolog [Ornithorhynchus
anatinus]
Length = 314
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 152/208 (73%)
Query: 11 TLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKN 70
+L+KT KKGLE KQNL EL K V+ Y +++FSV NMRNSKLKD+R+ WK SR FFGKN
Sbjct: 62 SLTKTAKKGLEVKQNLIGELRKCVDTYKYLYIFSVANMRNSKLKDIRSAWKHSRIFFGKN 121
Query: 71 KVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFI 130
KVM ALG+ +E + N++ VS LKG+ GLLFTNR+K +V WF Y D+A++G
Sbjct: 122 KVMMVALGRGPAEEYKDNLYQVSKRLKGEVGLLFTNRTKAEVNEWFRRYSKTDYARAGNR 181
Query: 131 STEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ V L GPL +FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GDVL PEQAR+L
Sbjct: 182 AAFTVRLDVGPLDQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLNPEQARVL 241
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENL 218
KLL +MA+F+V + ++ + GTFE+L
Sbjct: 242 KLLGFEMAEFRVTIKSVWHAETGTFEHL 269
>gi|340375833|ref|XP_003386438.1| PREDICTED: mRNA turnover protein 4 homolog [Amphimedon
queenslandica]
Length = 237
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/234 (51%), Positives = 159/234 (67%), Gaps = 5/234 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ +L+ T KKG ERK +L ++ ++Y+N++VFSV+NMRNSKLKDVR W
Sbjct: 1 MPKSKRNRVYSLTNTRKKGSERKASLLQDVRDCCDQYSNLYVFSVENMRNSKLKDVRTQW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFF GKN+VM ALG + E ++ +H +++ L+G GLLFTN V WF+ Y
Sbjct: 61 KHSRFFLGKNRVMQLALGNDEAQEYKEGLHKIANFLRGNVGLLFTNEDNSLVKSWFESYY 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SGF++ + + L+EGPL +F HSIEP LR LGL T L KG V L +DH VC GD
Sbjct: 121 EMDYARSGFVAEQRIALEEGPLDQFTHSIEPHLRSLGLPTKLEKGKVILLQDHVVCSPGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLDREKTPMDIYDMED 233
LTPEQARILKLL +AKF+V LL WY K+G+ L D TP Y+ D
Sbjct: 181 TLTPEQARILKLLGFPLAKFEVRLLAHWY--KDGSVTRLSDH--TPCGGYNSHD 230
>gi|326430524|gb|EGD76094.1| mRNA turnover protein 4 mrt4 [Salpingoeca sp. ATCC 50818]
Length = 216
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 154/209 (73%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L++T +KGL+ K+ L ++ A +++ +F+FSV+NMRN+KLK+VR W
Sbjct: 1 MPKSKRAKVVSLTQTDRKGLQTKKALVQQIHDACDEFARVFIFSVENMRNAKLKEVRTGW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DSRFFFGKNKVM+ A G E E N+H +S L G G+LFTNR ++DV WF YE
Sbjct: 61 RDSRFFFGKNKVMSIAFGLDPESEYRTNMHEISKRLSGNVGVLFTNRPREDVEKWFKTYE 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+D+A++G ST+ V L GPLP+F H++EPQLR+LGL T+L +G+VTL KD+T+C+KG
Sbjct: 121 VKDYARAGNPSTQAVRLMAGPLPQFSHALEPQLRKLGLPTSLKRGIVTLEKDYTICEKGV 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L+PEQAR+LKL + MA F++ L Y+
Sbjct: 181 TLSPEQARLLKLFEHPMATFRINLLAVYD 209
>gi|167515708|ref|XP_001742195.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778819|gb|EDQ92433.1| predicted protein [Monosiga brevicollis MX1]
Length = 216
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 158/219 (72%), Gaps = 4/219 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L++T KKGLE K L +++ + +++Y ++FSV NMRN+KLKDVR W
Sbjct: 1 MPKSKRAKVVSLTQTDKKGLETKTQLVEQIQQCLDEYKAAYIFSVDNMRNAKLKDVRLAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
++SRFFFGKN+VM A G S +DE + N H++S LKG G+LFTN+ +DV+ WF+ +
Sbjct: 61 RNSRFFFGKNRVMQRAFGFSAQDEYKPNTHLISEHLKGNVGILFTNKKHEDVVSWFETFA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SG +T+ V+L GPL EF H++EPQLR LGL T+L +G+VTL D+ VC KGD
Sbjct: 121 ELDYARSGNPATDTVKLTAGPLTEFAHTMEPQLRALGLPTSLKRGIVTLDNDYLVCNKGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
L+PEQARILKL K MA+FK+ L W ++G F L
Sbjct: 181 SLSPEQARILKLFSKPMAEFKIKLTSAW---RDGEFSEL 216
>gi|281343024|gb|EFB18608.1| hypothetical protein PANDA_003700 [Ailuropoda melanoleuca]
Length = 213
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 141/192 (73%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKN 88
+L K V+ Y +F+FSV NMRNSKLKD+RN WK SR FFGKNKVM ALG+S DE + N
Sbjct: 4 QLRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPADEYKDN 63
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+H VS L+G+ GLLFTNR+K++V WF Y + DFA++G +T V L GPL +FPHS
Sbjct: 64 LHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATFTVTLDPGPLEQFPHS 123
Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+EPQLRQLGL T L +GVVTL DH VCK+GDVLTPEQAR+LKL +MA+FKV + +
Sbjct: 124 MEPQLRQLGLPTALKRGVVTLLSDHEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 183
Query: 209 NKKEGTFENLLD 220
+ + G F+ + D
Sbjct: 184 DAQSGRFQQMGD 195
>gi|242017680|ref|XP_002429315.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
gi|212514218|gb|EEB16577.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
Length = 234
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 167/236 (70%), Gaps = 9/236 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+K++L++T KKGL KQNL E+ + + KY+++++F V+NMRN LK+VR +W
Sbjct: 1 MPKSKRDQKISLTQTKKKGLSFKQNLVAEIRENLTKYDSLYLFYVKNMRNIALKEVRAEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGK+K+MA ALGK+ E E N+H ++ +KGQCGLLFTN K DV+ WFD Y
Sbjct: 61 KHSRFFFGKSKLMALALGKTTESEQGDNVHKLAKEIKGQCGLLFTNEKKSDVVKWFDNYY 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++A+SGF + V L EGPL +F S+EP LR+LGL T + G V L ++TVC GD
Sbjct: 121 KPEYARSGFQVKKTVTLPEGPLLDFIGSMEPNLRKLGLPTVIKNGKVHLRHEYTVCNSGD 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+LTP QA+ILKL+ + +A+FK+ L +W K+G+FE L D +I +ED++
Sbjct: 181 ILTPAQAQILKLIGECLAQFKITLKCVWM--KDGSFEVLND------NIEGIEDEQ 228
>gi|391343175|ref|XP_003745888.1| PREDICTED: mRNA turnover protein 4 homolog [Metaseiulus
occidentalis]
Length = 348
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 165/224 (73%), Gaps = 4/224 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP SKR++ V+L++ +KGLE KQ L +E+ KA+++Y+++++FS+QNMRN+KLK+VR +W
Sbjct: 1 MPVSKRNRVVSLTQAKRKGLEHKQKLVEEIRKALDQYDSVYIFSIQNMRNNKLKEVREEW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K S+F GKNKV+ ALG++ E+EI NIH VS L GQCGLL T++ +++VL WF+ +
Sbjct: 61 KGTSKFIMGKNKVLQLALGRNAENEIADNIHKVSERLLGQCGLLLTSQPEEEVLAWFEDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ DFA++GF++TE V LKE L +FPHS+EPQ R+LGL T L +G + L + TVC +G
Sbjct: 121 READFARAGFVATETVVLKENDLDDFPHSMEPQFRRLGLPTRLVRGKIQLTNEFTVCNEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLDRE 222
DVLTPE A +LK +MA+F + L +W KK+G+F L + E
Sbjct: 181 DVLTPEMADVLKHKGIQMAEFHITLECVW--KKDGSFRVLREVE 222
>gi|440801769|gb|ELR22774.1| ribosomal protein L10, putative [Acanthamoeba castellanii str.
Neff]
Length = 251
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 152/224 (67%), Gaps = 6/224 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R+K V L+KT KK RK+ L D L K +E+Y +++VF+ +NMR+++ K VR W
Sbjct: 1 MPKSRRNKMVALTKTEKKVGRRKEELVDNLRKGLEEYASVYVFTFENMRSTQFKSVRARW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
SRF+ GKNKVM ALG+S +DE ++H +S L G GL TN D+V +F Y
Sbjct: 61 SGSRFYLGKNKVMQIALGRSGQDEAAHDLHKLSRQLVGNSGLFLTNSPADEVATFFKDYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A++GF+ST+ VEL GPLP F HS+EP LR+LG+ T LNKGV+ L + TVCK+G
Sbjct: 121 ESDYARAGFVSTQTVELPAGPLPNFAHSMEPHLRKLGMPTRLNKGVIELDRHFTVCKEGA 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLW-----YNKKEGTFENL 218
LTPEQA+ILKLL+ KM++F + L +W + EG FE L
Sbjct: 181 TLTPEQAKILKLLEIKMSQFSMALKCVWKRTSDFATGEGAFEML 224
>gi|312380235|gb|EFR26292.1| hypothetical protein AND_07761 [Anopheles darlingi]
Length = 294
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 155/215 (72%), Gaps = 5/215 (2%)
Query: 15 TVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMA 74
T +K L KQ + +E+ EKY N+F+F+VQNMRNSKLK++R WK+SRFFFGKN+VM
Sbjct: 29 TDRKELSEKQQIIEEIQMCREKYENVFLFTVQNMRNSKLKEIRTKWKNSRFFFGKNRVMQ 88
Query: 75 YALG-KSQEDEI---EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFI 130
L S ED++ E + + + GQCGLLFT+ +K+ VL WFD Y +++A+SGF
Sbjct: 89 LGLKLVSDEDKLGKLEAGMDQLREQMIGQCGLLFTSETKETVLDWFDSYIVDEYARSGFR 148
Query: 131 STEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+T+ V+L+ GPL EF H+IEP LR LG+ T L++GVVTL+K++TVC+K VLTPEQARIL
Sbjct: 149 ATQTVKLEAGPLEEFSHAIEPHLRSLGMPTKLDRGVVTLYKEYTVCEKNKVLTPEQARIL 208
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTP 225
KLL K MAKFK+++ Y KEG FE + +R+ P
Sbjct: 209 KLLGKPMAKFKIIINCCYTAKEG-FELINNRDVEP 242
>gi|196016567|ref|XP_002118135.1| hypothetical protein TRIADDRAFT_51180 [Trichoplax adhaerens]
gi|190579261|gb|EDV19360.1| hypothetical protein TRIADDRAFT_51180 [Trichoplax adhaerens]
Length = 236
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 159/238 (66%), Gaps = 22/238 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V+L+KT K + K++L +++ + Y + FVFSV+NMRN+KLK+VRN W
Sbjct: 1 MPKSKRNKIVSLTKTKGKNFDHKKDLIEQIRTCADNYQHAFVFSVENMRNNKLKEVRNLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFF GKN + ALG+S +DE + +H ++ LKG GLLFTN +KD+ + WF +
Sbjct: 61 KDSRFFLGKNNIAQIALGRSVQDEYKDGLHHIAKKLKGNVGLLFTNCNKDEAIQWFSKFA 120
Query: 121 DEDFAKSGFISTEDVELKE-------------------GPLPEFPHSIEPQLRQLGLQTN 161
+ D+A++GF +T DVEL E GP+ +FPHS+EP LRQLG+ T
Sbjct: 121 ENDYARAGFEATLDVELPEGKSKIVSTNNSSYFNGMTTGPIDQFPHSMEPYLRQLGMPTC 180
Query: 162 LNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
L KG+VTL ++TVCK GD LTPEQA++LKL +A F+V LL +W +G FE+L
Sbjct: 181 LKKGIVTLSTNYTVCKVGDKLTPEQAKVLKLFNIPLATFRVQLLSIW--SADGLFEDL 236
>gi|402853257|ref|XP_003891314.1| PREDICTED: mRNA turnover protein 4 homolog [Papio anubis]
Length = 244
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/225 (52%), Positives = 151/225 (67%), Gaps = 5/225 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMA-----YALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
K SR + L + ++ + VS L+G+ GLLFTNR+K++V W
Sbjct: 61 KHSRCLGHATDTLITTKCYLPLKSTSFSLLQLVLGRVSKRLRGEVGLLFTNRTKEEVNEW 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
F Y + D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D V
Sbjct: 121 FTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGVVTLLSDFEV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
CK+GDVLTPEQARILKL +MA+FKV + ++ + G F+ + D
Sbjct: 181 CKEGDVLTPEQARILKLFGYEMAEFKVTIKYMWDSQSGRFQQMGD 225
>gi|221121850|ref|XP_002154208.1| PREDICTED: mRNA turnover protein 4 homolog [Hydra magnipapillata]
Length = 224
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 157/219 (71%), Gaps = 5/219 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R+K ++LSKT KK + K++L DE+ K ++Y +++VFSV+NMRN KLKDVR W
Sbjct: 1 MPKSRRNKVISLSKTTKKEFQTKKSLVDEIRKCCDEYTSLYVFSVENMRNDKLKDVRQKW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFF+GKNKVMA+ LG+++E E ++N+H +SS L G G++FTN S+ V WF+ +
Sbjct: 61 KTSRFFYGKNKVMAFGLGRTKEIEYKENLHKISSELVGNVGIMFTNESQQVVKEWFEKFS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE--FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+ D+A+SG +T+ V + EGPL E F +++EP LR LGL L KGV+ L +++TVCK+
Sbjct: 121 EVDYARSGNTATQTVTIPEGPLDENSFQYTMEPVLRALGLPVILQKGVIHLTQEYTVCKE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFE 216
GD L+PEQ ++LKL +A F + L +W++ G FE
Sbjct: 181 GDTLSPEQCKVLKLFSYPLAVFHITLKCVWHST--GQFE 217
>gi|320163226|gb|EFW40125.1| Mrto4 protein [Capsaspora owczarzaki ATCC 30864]
Length = 257
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 143/191 (74%), Gaps = 4/191 (2%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKN 88
++ ++KY++++VF+V+NMRN KLKDVR++WK SRFFFGKN+VMA ALG S+E+E E N
Sbjct: 46 QIRSCIQKYSSVYVFAVRNMRNIKLKDVRSEWKHSRFFFGKNRVMALALGNSEENEQETN 105
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ VS+ L GQ GLLFT++ +++V+ WF+ + D +FA+SGF+S+E V++ GPLP+F H+
Sbjct: 106 LREVSNMLVGQTGLLFTSQPREEVIAWFENHHDLEFARSGFVSSETVKIPAGPLPQFSHT 165
Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
+ L +LGL LNKG++TL K HTVC KGD LTPEQARILKL+ + +A F + L W
Sbjct: 166 MHNDLLRLGLPIVLNKGIITLEKPHTVCSKGDTLTPEQARILKLIDRPLADFHIKLKAAW 225
Query: 208 YNKKEGTFENL 218
N G FE L
Sbjct: 226 SN---GEFEVL 233
>gi|6015629|emb|CAB57816.1| muscle protein 684 [Mus musculus]
Length = 207
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 133/181 (73%)
Query: 40 IFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQ 99
+F+FSV NMRNS+LKD+RN WK SR FFGKNKVM LG+S DE + N+H V L+G+
Sbjct: 27 LFIFSVANMRNSELKDIRNAWKHSRMFFGKNKVMMVPLGRSPSDEYKDNLHQVGKKLRGE 86
Query: 100 CGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQ 159
GLLFTNR+K++V WF + DFA++G +T V L GPL +FPHS+EPQLRQLGL
Sbjct: 87 VGLLFTNRTKEEVNEWFTKXTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLP 146
Query: 160 TNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLL 219
T L KGVVTL D+ VCK+GDVLTPEQARILKL +MA+FKV++ ++ + G F+ +
Sbjct: 147 TALKKGVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKXMWDAQSGRFQQMD 206
Query: 220 D 220
D
Sbjct: 207 D 207
>gi|116792405|gb|ABK26353.1| unknown [Picea sitchensis]
Length = 229
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 150/213 (70%), Gaps = 1/213 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K VTLSKT KKG E K+++ +++ +A+E Y +++VFS +NMRN K K +R+
Sbjct: 1 MPKSKRNKMVTLSKTKKKGREHKESIVNQVRQALEDYISVYVFSFENMRNVKFKGLRDRL 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K SRFF G NKV+ +LG++ DE++ IH S L G CGL FTN K++V+ F+ +
Sbjct: 61 KGSSRFFLGSNKVLQISLGRTAADEVKDGIHKASEMLHGDCGLFFTNLPKEEVMRVFETF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G ++TE +ELKEGPL +F H +EP LR+ G+ LNKGVV L DH VC++G
Sbjct: 121 EEHDFARTGSLATETIELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVADHVVCQEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
+ ++PE +RIL LL +MA F++ L ++ E
Sbjct: 181 ERISPEASRILHLLGVQMATFRLNLVCRWSPAE 213
>gi|148681357|gb|EDL13304.1| RIKEN cDNA 2610012O22, isoform CRA_b [Mus musculus]
Length = 168
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/166 (63%), Positives = 126/166 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L K V
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKAV 166
>gi|148681359|gb|EDL13306.1| RIKEN cDNA 2610012O22, isoform CRA_d [Mus musculus]
Length = 192
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 129/173 (74%)
Query: 48 MRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNR 107
MRNSKLKD+RN WK SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR
Sbjct: 1 MRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNR 60
Query: 108 SKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVV 167
+K++V WF Y + DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVV
Sbjct: 61 TKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVV 120
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
TL D+ VCK+GDVLTPEQARILKL +MA+FKV++ ++ + G F+ + D
Sbjct: 121 TLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKYMWDAQSGRFQQMDD 173
>gi|344256955|gb|EGW13059.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 188
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/208 (53%), Positives = 139/208 (66%), Gaps = 33/208 (15%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FF KNK++ ALG+S +E + N+H VS L+G+ GLLFTN K++
Sbjct: 61 KHSQMFFNKNKLVMVALGRSPSEEYKDNLHQVSKKLRGEVGLLFTNCKKEE--------- 111
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+FPHS+EPQLRQLGL T L KGVVTL D+ VCK+GD
Sbjct: 112 -----------------------QFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD 148
Query: 181 VLTPEQARILKLLKKKMAKFKVLL-YLW 207
VLTPEQA +LKL +MA+FKV + Y+W
Sbjct: 149 VLTPEQASVLKLFGYEMAEFKVTIKYMW 176
>gi|149024423|gb|EDL80920.1| rCG31507, isoform CRA_c [Rattus norvegicus]
Length = 169
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 126/167 (75%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVV 167
+ DFA++G +T V L GPL +FPHS+EPQLRQLGL T L K V
Sbjct: 121 EMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKEAV 167
>gi|217073168|gb|ACJ84943.1| unknown [Medicago truncatula]
Length = 228
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K+VTLSKT KKG K+ + + + A EKY++I+VF+ QNMRNSKLK+ R
Sbjct: 1 MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ S +FF G NKVM A+G+S DEI+ N+H VS L+G G++FTN SK++V F+ +
Sbjct: 61 QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E DFA++G I+TE VELKEGPL +F H +EP LR+ G+ LNKGVV L D VC++G
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRRQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+PE +RIL+L+ MA F++ L+ W
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRW 209
>gi|357445637|ref|XP_003593096.1| mRNA turnover protein-like protein [Medicago truncatula]
gi|124360427|gb|ABN08437.1| Ribosomal protein L10 [Medicago truncatula]
gi|355482144|gb|AES63347.1| mRNA turnover protein-like protein [Medicago truncatula]
gi|388513309|gb|AFK44716.1| unknown [Medicago truncatula]
Length = 228
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K+VTLSKT KKG K+ + + + A EKY++I+VF+ QNMRNSKLK+ R
Sbjct: 1 MPKSKRNKQVTLSKTTKKGRGHKELIINGIRDAAEKYSSIYVFNFQNMRNSKLKEFREQL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ S +FF G NKVM A+G+S DEI+ N+H VS L+G G++FTN SK++V F+ +
Sbjct: 61 QSSSKFFLGSNKVMQVAIGRSSSDEIKPNLHKVSKLLRGDAGMIFTNLSKEEVERLFNEF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E DFA++G I+TE VELKEGPL +F H +EP LR+ G+ LNKGVV L D VC++G
Sbjct: 121 EGYDFARTGSIATEKVELKEGPLEQFTHDMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+PE +RIL+L+ MA F++ L+ W
Sbjct: 181 KPLSPEASRILRLMGNMMATFRLNLVCRW 209
>gi|157821625|ref|NP_001100167.1| mRNA turnover protein 4 homolog [Rattus norvegicus]
gi|149024421|gb|EDL80918.1| rCG31507, isoform CRA_a [Rattus norvegicus]
Length = 193
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 128/173 (73%)
Query: 48 MRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNR 107
MRNSKLKD+RN WK SR FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR
Sbjct: 1 MRNSKLKDIRNAWKHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNR 60
Query: 108 SKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVV 167
+K++V WF Y + DFA++G +T V L GPL +FPHS+EPQLRQLGL T L KGVV
Sbjct: 61 TKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVV 120
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
TL D+ VCK+GDVLTPEQAR+LKL +MA+FKV + ++ + G F+ + D
Sbjct: 121 TLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDAQSGRFQQMDD 173
>gi|18395622|ref|NP_564226.1| Ribosomal protein L10 family protein [Arabidopsis thaliana]
gi|15028333|gb|AAK76643.1| unknown protein [Arabidopsis thaliana]
gi|19310645|gb|AAL85053.1| unknown protein [Arabidopsis thaliana]
gi|21593993|gb|AAM65913.1| unknown [Arabidopsis thaliana]
gi|332192473|gb|AEE30594.1| Ribosomal protein L10 family protein [Arabidopsis thaliana]
Length = 235
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 146/209 (69%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+ VTLSKT KKG E K+ + + + +AVEKY++++VFS +NMRN K K+ R +
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ + +FF G NKVM ALG+S EDE+ I+ VS L+G GLL T+ K++V F+ Y
Sbjct: 61 RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
ED DF+++G I+ E VELKEGPL +F H +EP LR+L + LNKG V L D VC++G
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+P+ A IL+LL+ KMA FK+ LL W
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRW 209
>gi|341877541|gb|EGT33476.1| hypothetical protein CAEBREN_32388 [Caenorhabditis brenneri]
Length = 220
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+RDK V+L+K KK E K NL +E+ +VE+Y N+F+F++ NMR+++ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKETKNNLVNEVRASVEQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SRFFFGKN V+A ALGK + DE +H S LKGQCGL+FTN SK +VL F
Sbjct: 61 KETSRFFFGKNNVIAIALGKQKSDEYANQLHKASELLKGQCGLMFTNMSKKEVLTEFAQI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ED+A+ G +TE V L EGP+ +F S+EPQLR+LGL T L+KGV+TL++ VCKKG
Sbjct: 121 SEEDYARVGDEATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKKG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
D LT EQA+ILK + KMA+F+++ ++NKK+G
Sbjct: 181 DKLTVEQAKILKHFEYKMAEFRLIFKGFWNKKDG 214
>gi|224115598|ref|XP_002317075.1| predicted protein [Populus trichocarpa]
gi|222860140|gb|EEE97687.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ VTLSKT KKG E K+++ + + AVEKYN+I+VFS +NMRN K K+ R
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K SRFF G NKVM +LG+S DEI +H VS L G GL TN S+++V F+ Y
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G +TE VELKEGPL +F H +EP LR+ G+ LNKGV+ L + VC++G
Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+PE +RIL+LL KMA F++ L+ W
Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRW 209
>gi|115899403|ref|XP_784045.2| PREDICTED: mRNA turnover protein 4 homolog [Strongylocentrotus
purpuratus]
Length = 340
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 130/165 (78%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+RDK+++L++T KKGLE KQNL +E+ +V+KY I +FSV+NMRNSK+KDVRN W
Sbjct: 1 MPKSRRDKRISLTRTKKKGLETKQNLIEEVRDSVDKYARIVIFSVENMRNSKIKDVRNSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SRFFFGKNKVM ALGKS E+E N+H VS L G GLLFTN++KD+V+ +F+ +
Sbjct: 61 KHSRFFFGKNKVMMVALGKSAEEEYRDNLHRVSKRLMGNVGLLFTNKTKDEVVKFFEGFV 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKG 165
+ D+A+SG I+TE V L EGPL +F HS+EPQLRQL L T+L KG
Sbjct: 121 EADYARSGNIATETVVLPEGPLEDFQHSMEPQLRQLHLPTSLKKG 165
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 120/177 (67%), Gaps = 4/177 (2%)
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K FFFGKNKVM ALGKS E+E N+H VS L G GLLFTN++KD+V+ +F+ +
Sbjct: 163 KKGEFFFGKNKVMMVALGKSAEEEYRDNLHRVSKRLMGNVGLLFTNKTKDEVVKYFEGFV 222
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ D+A+SG ++TE V L EGPL +F HS+EPQLRQL L T+L KG++ L +HTVCK GD
Sbjct: 223 EADYARSGNVATETVVLPEGPLEDFQHSMEPQLRQLNLPTSLKKGIIHLTSEHTVCKVGD 282
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLDREKTPMDIYDMEDDEN 236
LTPEQARILKL K MA+FK+ L W N G FE + D D +DDE+
Sbjct: 283 TLTPEQARILKLFAKPMAEFKLKLAASWSNN--GAFE-VFDDAPDSKSRSDGDDDED 336
>gi|341899820|gb|EGT55755.1| hypothetical protein CAEBREN_19651 [Caenorhabditis brenneri]
Length = 220
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+RDK V+L+K KK E K NL +E+ +V++Y N+F+F++ NMR+++ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKETKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SRFFFGKN V+A ALGK + DE +H S LKGQCGL+FTN SK +VL F
Sbjct: 61 KETSRFFFGKNNVIAIALGKQKSDEYANQLHKASELLKGQCGLMFTNMSKKEVLTEFAQI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ED+A+ G +TE V L EGP+ +F S+EPQLR+LGL T L+KGV+TL++ VCKKG
Sbjct: 121 SEEDYARVGDEATETVVLPEGPISQFAFSMEPQLRKLGLPTELDKGVITLYQQFEVCKKG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
D LT EQA+ILK + KMA+F+++ ++NKK+G
Sbjct: 181 DKLTVEQAKILKHFEYKMAEFRLIFKGFWNKKDG 214
>gi|388491758|gb|AFK33945.1| unknown [Lotus japonicus]
Length = 229
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K+VTLSKT KKG E K+ + + + A EKY++++VFS +NMRN K K+ R+
Sbjct: 1 MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K S RFF G NKVM ALG+S DEI+ ++ VS L+G G+ FTN SK++V F+ Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G I+TE V+L+EGPL +F H +EP LR+ G+ LNKGVV L D VC++G
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+PE +RIL+LL KMA F++ L+ W
Sbjct: 181 KPLSPEASRILRLLGIKMATFRLHLVCRW 209
>gi|449531629|ref|XP_004172788.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Cucumis
sativus]
Length = 197
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/194 (53%), Positives = 136/194 (70%), Gaps = 1/194 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+ VTLSKT KKG + K+++ + + +AVE YN++FVF+V+NMRN K K++R
Sbjct: 1 MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQL 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K SR FFG NKVM +LG+S DEI +H VS L G GL FTN K++V F+ Y
Sbjct: 61 KSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
ED D+A++G ++E VELKEGPL +F H +EP LR+LGL LNKGVV L D VC++G
Sbjct: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQARILKLL 193
L+PE A IL+ L
Sbjct: 181 KSLSPESAGILRAL 194
>gi|225448095|ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
gi|298204604|emb|CBI23879.3| unnamed protein product [Vitis vinifera]
Length = 229
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 142/213 (66%), Gaps = 1/213 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+ VTLSKT KKG K+++ + + +AVE Y++I+VFS +NMRN K K+ R
Sbjct: 1 MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K SRFF G NKVM A+G+S DEI + VS L G GL FTN K++V F+ Y
Sbjct: 61 KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G + E VELKEGPL +F H +EP LR+ G+ LNKGVV L D VC++G
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
L+PE ARIL+LL KMA F++ L ++ E
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDE 213
>gi|308502548|ref|XP_003113458.1| hypothetical protein CRE_26450 [Caenorhabditis remanei]
gi|308263417|gb|EFP07370.1| hypothetical protein CRE_26450 [Caenorhabditis remanei]
Length = 220
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+RDK V+L+K KK + K NL +E+ +V++Y N+F+F++ NMR+++ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+S RFFFGKN V++ ALGK + DE +H S+ LKGQCGL+FTN S+ +V FD
Sbjct: 61 KESSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSQKEVKAEFDQI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ED+A+ G +TE V L EGP+ +F S+EPQLR+LGL T L+KGV+TL++ VCK+G
Sbjct: 121 TEEDYARVGDTATETVVLPEGPIAQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
+ LT EQA+ILK + KMA+F+++ +NKK+G
Sbjct: 181 EPLTVEQAKILKHFEIKMAQFRLIFKAMWNKKDG 214
>gi|224056765|ref|XP_002299012.1| predicted protein [Populus trichocarpa]
gi|118486150|gb|ABK94918.1| unknown [Populus trichocarpa]
gi|222846270|gb|EEE83817.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 141/209 (67%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ VTLSKT KKG E K+++ + + AVEKYN+I+VFS +NMRN K K+ R
Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K SRFF G NKVM +LG+S DEI +H VS L G GL TN +++V F+ Y
Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G +TE VELKEGPL +F H +EP LR+ G+ LNKGV+ L D V ++G
Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+PE ARIL+LL K A FK+ L+ W
Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRW 209
>gi|414588774|tpg|DAA39345.1| TPA: mRNA turnover protein 4 [Zea mays]
Length = 231
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + E+ AV+KY++ +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GLLFTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSAADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G + + VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
G L+PE A+IL+LL +MA F++ L ++ E
Sbjct: 181 GKPLSPEAAQILRLLGIQMATFRLYLVCRWSSDE 214
>gi|302755168|ref|XP_002961008.1| hypothetical protein SELMODRAFT_164004 [Selaginella moellendorffii]
gi|300171947|gb|EFJ38547.1| hypothetical protein SELMODRAFT_164004 [Selaginella moellendorffii]
Length = 227
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K VTLSKT KKG E K+++ + KA E++ ++VFS +NMRN K K +R++
Sbjct: 1 MPKSKRNKLVTLSKTKKKGREHKESIVTAVRKASEEFRELYVFSFENMRNGKFKALRDEL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K S RFF G NKV+ A+GK DE+++ IH S L G G+LFTN ++V F +
Sbjct: 61 KSSTRFFLGSNKVLQIAIGKGPSDEVKEGIHKASEFLCGNTGMLFTNLPNEEVARIFTDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G +TE VEL EGPL +F H +EP LR+ G+ LN+GVV L D+TVC++G
Sbjct: 121 EELDFARTGSTATETVELNEGPLEQFTHEMEPFLRKQGMPVRLNRGVVELVGDYTVCREG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
+ ++PE +RIL+LL KMA F++ LL W
Sbjct: 181 EAISPEASRILRLLGVKMAPFRMSLLCRW 209
>gi|268562559|ref|XP_002646691.1| Hypothetical protein CBG13068 [Caenorhabditis briggsae]
Length = 220
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+RDK V+L+K KK + K +L +E+ +V++Y N+F+F++ NMR+++ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNSLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+S RFFFGKN V+A ALGK + DE +H S+ LKGQCGL+FTN SK +V F
Sbjct: 61 KESSRFFFGKNNVIAIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVETEFAKI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ED+A+ G ++TE V L EGP+ +F S+EPQLR+LGL T L+KG++TL+++ VCK+G
Sbjct: 121 SEEDYARVGDLATETVVLPEGPIAQFAFSMEPQLRKLGLPTKLDKGIITLYQEFEVCKEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
LT EQA+ILK + KMA+F+++ +NKK+G
Sbjct: 181 QPLTVEQAKILKHFEIKMAQFRLIFKAMWNKKDG 214
>gi|225712724|gb|ACO12208.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
gi|290561501|gb|ADD38151.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
Length = 244
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 146/215 (67%), Gaps = 5/215 (2%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKRDKKV+L+KT KK GLE K+ L D++ ++++ Y +F+F +N RN L+ +R +
Sbjct: 1 MPKSKRDKKVSLTKTDKKVGLESKRALVDKIRESLDAYTRVFIFETENARNLHLQKIRRE 60
Query: 60 WKD----SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
WK+ S FF GKN+VM+ ALG+S E+E+ +H +S+ L GQ GLLFTN + DD L +
Sbjct: 61 WKEDKGGSVFFMGKNRVMSLALGRSAEEEVGPGLHKISALLNGQRGLLFTNETLDDSLDY 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
F ++ DFA+SG I+ + V L EGP+ E +IEPQLR LGL + L KG++ L KDH V
Sbjct: 121 FQKNKEPDFARSGGIAPQTVVLPEGPIQEMSFAIEPQLRALGLPSTLKKGILHLTKDHVV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
CK+G L QARILKL K A F + L ++++
Sbjct: 181 CKEGQTLDSTQARILKLFGMKHADFSIKLLAYWDR 215
>gi|225709968|gb|ACO10830.1| mRNA turnover protein 4 homolog [Caligus rogercresseyi]
Length = 243
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 155/242 (64%), Gaps = 7/242 (2%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKRDKKV+L+KT KK GLE K+ L D++ + + IF+F +N RN L+ +R +
Sbjct: 1 MPKSKRDKKVSLTKTEKKVGLENKRVLVDKIRDTLSGHTRIFLFETENARNLHLQRIRRE 60
Query: 60 WKD----SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
WK+ S FF GKN++M+ ALG+++E+EI +H +S L GQ GLLFTN D+ L +
Sbjct: 61 WKEEKGGSVFFMGKNRIMSLALGRNEEEEIAPGLHKLSELLSGQRGLLFTNEPLDETLEY 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
F+ + DFA+SG I+T+ V L EGP+PE +IEPQLR LGL + L KG++ L K+H V
Sbjct: 121 FNSNTEPDFARSGSIATQTVVLPEGPIPEMSFAIEPQLRSLGLPSALKKGILHLTKEHVV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
CK+G L Q RILKL K A F++ LL +W +E E + P + D E+D
Sbjct: 181 CKEGSTLNSNQTRILKLFGMKHADFRIKLLAVWDRNQEAGKEFTTLVKNIPTN-SDGEED 239
Query: 235 EN 236
E+
Sbjct: 240 ED 241
>gi|390603021|gb|EIN12413.1| hypothetical protein PUNSTDRAFT_97129 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 251
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 145/222 (65%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K VTLSK KK + K L E+ AV+K+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRNKVVTLSKVDKKNRDHKNALVAEVQGAVDKWKYCWLFDVGNMRNAHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD+ R FFG+ VMA ALG + E E + +H ++S +KGQ GL FT+ +V WF +
Sbjct: 61 KDTGRLFFGRGAVMAIALGTTPESEHKTGLHHLASRIKGQVGLFFTDSEPAEVTEWFGDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA+SG ++T V L EGP+ PE FPH+ EPQLR+LGL T + +GV +L
Sbjct: 121 HPPDFARSGNVATRTVVLPEGPIMQHHSDPPEPFPHNEEPQLRKLGLHTVMKRGVPSLDN 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC KG VLTPEQA++LKL+ +KM +FKV L +++ + G
Sbjct: 181 PHTVCTKGKVLTPEQAQLLKLVGEKMVEFKVGLRAYWSAETG 222
>gi|225718576|gb|ACO15134.1| mRNA turnover protein 4 homolog [Caligus clemensi]
Length = 247
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 160/250 (64%), Gaps = 12/250 (4%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKRDKK++L++T KK GLE K+ L D + + + ++ IF+F +N RN L+ +R +
Sbjct: 1 MPKSKRDKKISLTQTQKKVGLESKRVLVDRIRETLNSHSRIFLFETENARNLHLQRIRRE 60
Query: 60 WKD----SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
WKD S FF GKN+VM+ ALG+S E+EI +H ++ LKGQ GLLFTN D+ L +
Sbjct: 61 WKDEKGGSVFFMGKNRVMSLALGRSAEEEIAPGLHKLAELLKGQRGLLFTNEPLDETLEY 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
F + DFA+SG I+ + + L EGP+ + +IEPQLR LGL + L KGV+ L KD+ V
Sbjct: 121 FSSNTEPDFARSGGIAPQTIVLPEGPVADMSFAIEPQLRSLGLPSALKKGVLHLTKDYVV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW-YNKKEGTFENLLDREKTPMDIYDMED 233
CK+G L QARILKL K ++FK+ LL +W N KEG ++L + DI D
Sbjct: 181 CKEGSTLNSNQARILKLFGMKHSEFKIKLLGVWERNNKEGKEFSMLVK-----DIPTNSD 235
Query: 234 DENNSNEESD 243
E ++ +E D
Sbjct: 236 GEGDNQDEED 245
>gi|348665976|gb|EGZ05804.1| hypothetical protein PHYSODRAFT_342006 [Phytophthora sojae]
Length = 255
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 142/208 (68%), Gaps = 1/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + L++ KKG E KQN+ D + AV+ Y + +VFS QNMR + K+VR D+
Sbjct: 22 MPKSKRQRTKPLTQANKKGNELKQNVVDAIRNAVDTYESAYVFSFQNMRTNHFKEVRMDF 81
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFF GKNKVM ALG+S+E+E +N+ +S + G GLLFT++ ++V +F
Sbjct: 82 KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTSKPHEEVAEYFAKLS 141
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
D+ +SGF++TE V + EGPLP+F S+ LR LGL +L KGVV L +++T+CK G
Sbjct: 142 VRDYPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKKGVVVLSRNYTICKPGQ 201
Query: 181 VLTPEQARILKLLKKKMAKFK-VLLYLW 207
LTPEQA++L +KMA+FK V+L +W
Sbjct: 202 TLTPEQAKLLVHFDRKMAEFKLVMLSVW 229
>gi|76160923|gb|ABA40425.1| unknown [Solanum tuberosum]
gi|413968558|gb|AFW90616.1| putative ribosomal protein L1 [Solanum tuberosum]
Length = 229
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 147/213 (69%), Gaps = 1/213 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ VTLSKT KKG E K+N+ + + + EKY++ +VFS +NMRN K K+ R+
Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K S RFF G NKVM ALG+S DEI +H +S ++G GL FTN SK++V F+ Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G +TE VEL+EGPL +F H +EP LR+ G+ LN+GVV L D VC++G
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
L+PE ARIL+LL KKMA F++ L ++ E
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDE 213
>gi|324523406|gb|ADY48244.1| MRNA turnover protein 4 [Ascaris suum]
Length = 219
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR+K+V+L+K KK E K+ L ++ +V+ Y N+FVF+V NMR +K +VR +
Sbjct: 1 MPRSKREKEVSLTKVKKKTKESKKTLVKDIRDSVDTYANLFVFNVDNMRATKFVEVRQKF 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRFFFGKN VMA ALG+ E + VSS LKGQCGL+FTN K+ V+ +F+ +
Sbjct: 61 KANSRFFFGKNNVMAVALGRDTNTEYANQLSKVSSMLKGQCGLMFTNADKEAVIKYFNEF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
++ D+A+ G +TE VEL EGPLP+F S+EPQLR+LGL T L+KGV+TL ++ +C +G
Sbjct: 121 KESDYARGGQEATETVELPEGPLPQFSFSMEPQLRKLGLPTRLDKGVITLTSNYVICTEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
LT EQAR+LKLL+ K + FK+ L + K G
Sbjct: 181 GRLTAEQARLLKLLQYKTSIFKINLLAHWTKISG 214
>gi|115483741|ref|NP_001065532.1| Os11g0105400 [Oryza sativa Japonica Group]
gi|77548268|gb|ABA91065.1| ribosomal protein L10 containing protein, expressed [Oryza sativa
Japonica Group]
gi|113644236|dbj|BAF27377.1| Os11g0105400 [Oryza sativa Japonica Group]
gi|125535490|gb|EAY81978.1| hypothetical protein OsI_37156 [Oryza sativa Indica Group]
gi|125578216|gb|EAZ19362.1| hypothetical protein OsJ_34914 [Oryza sativa Japonica Group]
gi|215695342|dbj|BAG90533.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + ++ AVE Y N +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GL FTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G I TE VELKEGPL +F H +EP LR+ GL LNKG V L DH VC++
Sbjct: 121 FEEHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGAVELVADHIVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G ++PE A+ L+LL +MA F++ L ++
Sbjct: 181 GKPISPEAAQTLRLLGMQMATFRLYLVCRWS 211
>gi|326514288|dbj|BAJ96131.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326530318|dbj|BAJ97585.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 234
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 141/211 (66%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + E+ A+E++++ +VF+ NMRN KLK +R+
Sbjct: 1 MPKSKRNRSVTLSKTKKKPGLERKGKVVTEIKDAIERHSSAYVFTYNNMRNQKLKALRDQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GLLFTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGASGLLFTNLPRDDVERLFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E DFA++G I+T+ VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEANDFARTGSIATQTVELKEGPLEKFSHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G L+PE A L++L KMA F++ L ++
Sbjct: 181 GKPLSPEAAHTLRVLGTKMATFRLYLVCRWS 211
>gi|194702330|gb|ACF85249.1| unknown [Zea mays]
gi|238015180|gb|ACR38625.1| unknown [Zea mays]
gi|414882023|tpg|DAA59154.1| TPA: hypothetical protein ZEAMMB73_797802 [Zea mays]
Length = 231
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 141/211 (66%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + E+ AV+KY++ +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GLLFTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G + + VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEEHDFARTGSTAIDTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G L+PE A+ L+LL +MA F++ L ++
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWS 211
>gi|242069641|ref|XP_002450097.1| hypothetical protein SORBIDRAFT_05g000460 [Sorghum bicolor]
gi|241935940|gb|EES09085.1| hypothetical protein SORBIDRAFT_05g000460 [Sorghum bicolor]
Length = 231
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 140/211 (66%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + E+ A++KY++ +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAIDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GL FTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDSGLFFTNLPRDDVERMFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G + E VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEEHDFARTGSTAAETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G L+PE A+ L+LL +MA F++ L ++
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWS 211
>gi|301090347|ref|XP_002895392.1| mRNA turnover protein 4 [Phytophthora infestans T30-4]
gi|262099013|gb|EEY57065.1| mRNA turnover protein 4 [Phytophthora infestans T30-4]
Length = 234
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 143/208 (68%), Gaps = 1/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R + L++ KKG E KQN+ D + AV+ Y++ +VFS QNMR + K+VR D+
Sbjct: 1 MPKSRRQRTKPLTQANKKGNELKQNVVDVIRNAVDTYDSAYVFSFQNMRTNHFKEVRMDF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFF GKNKVM ALG+S+E+E +N++ +S + G GLLFT++ D+V+ +F
Sbjct: 61 KDSRFFLGKNKVMKLALGRSKEEEYAENLYRLSKDVSGNTGLLFTSKPHDEVVDYFAKLS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
D +SGF++TE V + EGPLP+F S+ LR LGL +L GVV L +++T+CK G
Sbjct: 121 VSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPIDLKNGVVVLNQNYTICKTGQ 180
Query: 181 VLTPEQARILKLLKKKMAKFK-VLLYLW 207
LTPEQA++L +KMA+FK V+L +W
Sbjct: 181 TLTPEQAKLLVHFDRKMAEFKLVVLSVW 208
>gi|226498542|ref|NP_001148655.1| mRNA turnover protein 4 [Zea mays]
gi|195621132|gb|ACG32396.1| mRNA turnover protein 4 [Zea mays]
Length = 231
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSK ++ VTLSKT KK GLERK + E+ AV+KY++ +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKCNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GLLFTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDVERMFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G + + VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
G L+PE A+ L+LL +MA F++ L ++ E
Sbjct: 181 GKPLSPEAAQTLRLLGIQMATFRLYLVCRWSSDE 214
>gi|17533073|ref|NP_495470.1| Protein F10E7.5 [Caenorhabditis elegans]
gi|351061392|emb|CCD69167.1| Protein F10E7.5 [Caenorhabditis elegans]
Length = 220
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 153/214 (71%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+RDK V+L+K KK + K NL +E+ +V++Y N+F+F++ NMR+++ +R +
Sbjct: 1 MARSRRDKNVSLTKVKKKTKDTKNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKY 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SRFFFGKN V++ ALGK + DE +H S+ LKGQCGL+FTN SK +V F
Sbjct: 61 KENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEA 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ED+A+ G ++TE V L EGP+ +F S+EPQLR+LGL T L+KGV+TL++ VCK+G
Sbjct: 121 SEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEVCKEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
+ LT EQA+ILK + KM++F+++ +NKK+G
Sbjct: 181 EPLTVEQAKILKHFEVKMSQFRLIFKAHWNKKDG 214
>gi|11067271|gb|AAG28799.1|AC079374_2 unknown protein [Arabidopsis thaliana]
Length = 231
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 142/209 (67%), Gaps = 6/209 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD+ VTLSKT KKG E K+ + + + +AVEKY++++VFS +NMRN K K+ R +
Sbjct: 1 MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ + +FF G NKVM ALG+S EDE+ I+ VS L+G GLL T+ K++V F+ Y
Sbjct: 61 RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
ED DF+++G I+ E EGPL +F H +EP LR+L + LNKG V L D VC++G
Sbjct: 121 EDSDFSRTGSIAVET----EGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 176
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L+P+ A IL+LL+ KMA FK+ LL W
Sbjct: 177 KQLSPKSAHILRLLRMKMATFKLNLLCRW 205
>gi|312071184|ref|XP_003138491.1| ribosomal protein L10 domain-containing protein [Loa loa]
gi|307766349|gb|EFO25583.1| ribosomal protein L10 domain-containing protein [Loa loa]
Length = 219
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 144/214 (67%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+ V+L++ KK E+K L DE+ K V+ Y N+FV ++NMR++K ++R +
Sbjct: 1 MPKSKREVDVSLTRVKKKTKEQKIKLADEIRKCVDTYENLFVLEIENMRSTKFIEIRQKY 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ SRFF+GKN VMA ALGK+ E ++ VS LKG+CGL+FTN + + +FD
Sbjct: 61 KNNSRFFYGKNNVMAIALGKNPCTEYAHELNKVSGLLKGECGLMFTNEDHEIIKKYFDEL 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
DFA+ G ++ +EL EGPL +FP S+EPQLR+LGL T L KG+VTL +TVCK G
Sbjct: 121 YTLDFARCGQVAASTIELCEGPLMQFPFSLEPQLRKLGLPTKLEKGIVTLISHYTVCKDG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
D LT +Q R+LKLL K++ F V L ++K +G
Sbjct: 181 DKLTADQCRLLKLLNYKLSTFHVKLSAHWSKHKG 214
>gi|357161328|ref|XP_003579055.1| PREDICTED: mRNA turnover protein 4 homolog [Brachypodium
distachyon]
Length = 235
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK G ERK + E+ A E Y++ +VF+ NMRN KLKD+R+
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGQERKGRVVTEIKDAAENYSSAYVFTYNNMRNQKLKDLRDQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG++ DE++ + + L+G GLLFTN +D+V F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRTAADEVKTGMRKLCKFLQGSSGLLFTNLPRDEVESLFRD 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G ++TE VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++
Sbjct: 121 FEEHDFARTGTVATETVELKEGPLEQFSHEMEPFLRKQGLPVRLNKGVVELVADHVVCEE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G L+PE A L+LL +MA F++ L ++
Sbjct: 181 GKPLSPEAAHTLRLLGTRMATFRLYLVCRWS 211
>gi|384492996|gb|EIE83487.1| hypothetical protein RO3G_08192 [Rhizopus delemar RA 99-880]
Length = 220
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 149/216 (68%), Gaps = 4/216 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V+L+KT KKG E K+ L +++ + V+ Y+ +++FSV++MRN+ LK++RND+
Sbjct: 1 MPKSKRSTVVSLTKTDKKGREGKEKLINDVQECVDNYSYLYLFSVKDMRNTFLKEIRNDF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFF+GKN+VMA LG S E E ++ + ++ L + G+LFTN+ +V +FD +
Sbjct: 61 KDSRFFYGKNRVMAKGLGTSPETEYKEGLSGIAKDLSNEVGMLFTNKDPKEVQSYFDEFV 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE----FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVC 176
D+A+SG I+T+ V L EGP+ PH++EP +R LG+ T+L G+VTL +T+C
Sbjct: 121 HPDYARSGAIATQTVTLPEGPVKRGADPMPHNMEPLIRSLGMPTSLKNGIVTLLVPYTIC 180
Query: 177 KKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
+G+ LT QA +LKL ++A+FKV L +Y++ +
Sbjct: 181 TEGETLTTNQAHLLKLFYHQLAEFKVDLISYYHQGQ 216
>gi|428180589|gb|EKX49456.1| hypothetical protein GUITHDRAFT_151550 [Guillardia theta CCMP2712]
Length = 216
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 144/217 (66%), Gaps = 2/217 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP SKR K ++L+K K G + K++L + + + ++KY++++ S++NMR S LKD+R +
Sbjct: 1 MPSSKRQKLISLTKVKKAGRKHKESLVETIHECLDKYSHVYALSLENMRTSLLKDLRQKF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ RF GK VMA ALG+S E+E ++N+H V+ L G L F++R + ++ +FD Y+
Sbjct: 61 AEDRFVMGKQNVMALALGRSPEEETKENLHQVTQHLNGTTALFFSSRPQTEITSFFDKYQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ DFAK G +TED E++ GPLP F H++ LR+LGL L G V KDHTVCKKG
Sbjct: 121 ESDFAKGGVEATEDYEIQAGPLP-FQHTMVEPLRKLGLPVMLKNGTVMCEKDHTVCKKGV 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFE 216
VLTPEQA++LKLL +K A FK L +W++ FE
Sbjct: 180 VLTPEQAQVLKLLGEKQAIFKPELKCVWHDGTYAAFE 216
>gi|66818889|ref|XP_643104.1| ribosomal protein L10 family protein [Dictyostelium discoideum AX4]
gi|74860796|sp|Q86HD3.1|MRT4_DICDI RecName: Full=mRNA turnover protein 4 homolog
gi|60471196|gb|EAL69159.1| ribosomal protein L10 family protein [Dictyostelium discoideum AX4]
Length = 223
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 146/214 (68%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M KSKR+ V ++K K E+K+ L + V++Y I++F+ +NMRN+KLK VR +W
Sbjct: 1 MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+F FGKNKV++ LGKS+EDE++ N+H ++ L+G+CGL FTN KD V +F Y
Sbjct: 61 STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++DF +SGF+S E + +KEGP+ HS+E LR LGL T L GV+ + +++T+C+ G
Sbjct: 121 EKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGV 180
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
+TPEQ+++LKL ++++FK + ++N+ E T
Sbjct: 181 AVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFT 214
>gi|170577276|ref|XP_001893949.1| ribosomal protein L10 domain containing protein [Brugia malayi]
gi|158599729|gb|EDP37214.1| ribosomal protein L10 domain containing protein [Brugia malayi]
Length = 219
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+ V+L++ KK E+K L +E+ K V+ Y+++F+F ++NMR++K ++R +
Sbjct: 1 MPKSKREVDVSLTRVKKKTKEKKIKLVNEIRKCVDTYDHLFLFKIENMRSTKFIEIRQKY 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ S FF+GKN VMA ALGK+ E + ++ +S LKG+CGL+FTN D V +FD
Sbjct: 61 KNNSHFFYGKNNVMAIALGKTSSTEYARELNKISGLLKGECGLMFTNDDHDSVKKYFDEL 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
DFA+ G + VEL EGPL +FP S+EPQLR+LGL T L KG+VTL + VCK G
Sbjct: 121 YMSDFARCGQTAISTVELCEGPLTQFPFSLEPQLRKLGLPTKLEKGIVTLISHYVVCKDG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
D LT +Q R+LKLL KM+ F V L + K+ G
Sbjct: 181 DKLTADQCRLLKLLGYKMSTFHVKLSAHWCKRTG 214
>gi|449459290|ref|XP_004147379.1| PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus]
Length = 249
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/213 (49%), Positives = 141/213 (66%), Gaps = 5/213 (2%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFG 68
VTLSKT KKG + K+++ + + +AVE YN++FVF+V+NMRN K K++R K SR FFG
Sbjct: 30 VTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRLFFG 89
Query: 69 KNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSG 128
NKVM +LG+S DEI +H VS L G GL FTN K++V F+ YED D+A++G
Sbjct: 90 ANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTG 149
Query: 129 FISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
++E VELKEGPL +F H +EP LR+LGL LNKGVV L D VC++G L+PE A
Sbjct: 150 SAASEKVELKEGPLGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAG 209
Query: 189 ILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLD 220
IL+ L + A F++ L+ W G FE +D
Sbjct: 210 ILRALGLRTAIFRLNLVCRW---SPGDFELYID 239
>gi|330797356|ref|XP_003286727.1| hypothetical protein DICPUDRAFT_31349 [Dictyostelium purpureum]
gi|325083325|gb|EGC36781.1| hypothetical protein DICPUDRAFT_31349 [Dictyostelium purpureum]
Length = 220
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 144/208 (69%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
V L+K K E+K+ L + + ++ Y +I++F+ +NMRN+KLK +R W S+F FGK
Sbjct: 6 VPLTKVTKNPGEKKKKLINTIKDTIDNYKSIYLFTYENMRNNKLKALRTAWSTSKFLFGK 65
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
NKV+AY LGKS+EDE++ +H +S L+G+CGL FTN ++ VL +F+ + ++DF +SGF
Sbjct: 66 NKVLAYGLGKSEEDELKTGLHKLSEHLEGECGLFFTNEPREKVLEYFENFSEKDFPRSGF 125
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+ E + +KEGPL F HS+E LR LGL T+L GV+ L +D+ +C++G + P+Q+++
Sbjct: 126 VPEETITIKEGPLTGFVHSMETYLRGLGLPTSLKNGVIYLERDYDICEEGVAINPDQSQL 185
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
LKL ++++FK+++ Y ++E T N
Sbjct: 186 LKLFNHQISEFKIVVKGVYTEEEFTLLN 213
>gi|409042271|gb|EKM51755.1| hypothetical protein PHACADRAFT_262079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 251
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 143/222 (64%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E+K L E+ + +K+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRAKLVSLTKVAKKTREQKGALITEVQENADKWQYCWLFEVGNMRNTHLKIVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E + + ++ +KGQ GL+FT+ ++V+ WFD +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEYKLGLQKIAQQIKGQVGLMFTDSPPEEVIAWFDDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA+SG +T+ L GP+ PE FPH+ EPQLR+LGL T + +GV TL
Sbjct: 121 HPPDFARSGNRATQMFVLPAGPVMQQHSDPPEPFPHNEEPQLRKLGLHTKMVRGVPTLDT 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HT+C+KG VLTPEQA++LKL+ KM +F+V L ++ G
Sbjct: 181 PHTICEKGKVLTPEQAQLLKLIGIKMVEFRVALRARWSAANG 222
>gi|393213452|gb|EJC98948.1| hypothetical protein FOMMEDRAFT_113538 [Fomitiporia mediterranea
MF3/22]
Length = 250
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/241 (43%), Positives = 156/241 (64%), Gaps = 12/241 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E+K +L +E+ + +K+ ++F V MRN+ LK VR+ W
Sbjct: 1 MPKSKRAKVVSLTKVAKKTKEQKASLINEIQENADKWRYCWLFEVGTMRNTHLKTVRSLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ V+A ALG + E+E + ++ ++ LKGQ G+LFT+ ++V WFD +
Sbjct: 61 KDSARIFFGRCAVVAKALGSTPEEEYKPGLYNIAKQLKGQVGILFTDSPPEEVTEWFDDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DFA+SG I+++DV L EGP+ PE FPH+ EPQLR+LGL T++ +GV TL
Sbjct: 121 QQPDFARSGNIASQDVILPEGPVMQCHSNPPEPFPHNEEPQLRKLGLHTSMVRGVPTLNA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
H VC KG LT EQA++LKL+ +KM F+V L ++ G ++ E +P++ D
Sbjct: 181 PHRVCTKGKELTAEQAQLLKLIGEKMVVFRVHLRARWDAMTG---KVVQIEGSPVERGDG 237
Query: 232 E 232
E
Sbjct: 238 E 238
>gi|325179806|emb|CCA14209.1| mRNA turnover protein 4 putative [Albugo laibachii Nc14]
Length = 235
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 143/212 (67%), Gaps = 1/212 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + TL+KT KKG E K+N+ L +AV++Y +FVFS +NMR + LKDVR +
Sbjct: 1 MPKSKRHRVHTLTKTSKKGSELKKNIVASLREAVDEYGAVFVFSFENMRTNHLKDVRMEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DSR F GKNKVM ALG+ +E+E +H ++ L G GLLFT RS++++L F ++
Sbjct: 61 RDSRMFLGKNKVMKVALGRHKEEEYADELHRLARDLSGNVGLLFTKRSEEEILKAFKTFQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + GF +TE + + +GPLP+F S+ LR+LGL +L V L +D T+C KG+
Sbjct: 121 VPEYPRGGFCATETIVIPKGPLPQFTGSMVQTLRELGLLVDLKNMQVILQEDTTLCTKGN 180
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKK 211
+LTPEQA++L +KMA+F++ L+ +W K
Sbjct: 181 LLTPEQAKLLTHFDRKMAEFRLQLVSVWSGGK 212
>gi|218186258|gb|EEC68685.1| hypothetical protein OsI_37142 [Oryza sativa Indica Group]
Length = 247
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 139/225 (61%), Gaps = 16/225 (7%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + ++ AVE Y N +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
K S R F KVM ALG+S DE + +H +S L+G GL FTN +DDV F
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFRE 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+E+ DFA++G I+TE VELKEGPL +F H +EP LR+ G+ LNKG V L DH VC++
Sbjct: 121 FEEHDFARTGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEE 180
Query: 179 GDVLTPEQARIL--------------KLLKKKMAKFKVLLYLWYN 209
G ++PE A+ L +LL +MA F++ L ++
Sbjct: 181 GKPISPEAAQTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWS 225
>gi|346466455|gb|AEO33072.1| hypothetical protein [Amblyomma maculatum]
Length = 262
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 135/202 (66%), Gaps = 2/202 (0%)
Query: 8 KKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFF 66
K VTLSKT KKG + K+ + + +A+E + + +VF+ +NMRN K K+ R K +SRFF
Sbjct: 41 KAVTLSKTKKKGRQHKEVIVSSIKQALEDHGSAYVFTFENMRNQKFKEFREQLKSNSRFF 100
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
G NKVM +LG+S DE + IH +S L+G GLLFTN K++V F+ YED DFA+
Sbjct: 101 LGSNKVMQISLGRSVADETKPGIHKLSKFLRGDAGLLFTNLEKEEVQRTFEKYEDHDFAR 160
Query: 127 SGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQ 186
+G +TE VELKEGPL +F H +EP LR+ G+ L KGVV L D VC++G L+PE
Sbjct: 161 TGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLTKGVVELVSDFVVCEEGKPLSPES 220
Query: 187 ARILKLLKKKMAKFKV-LLYLW 207
ARIL+LL KMA F++ L+ W
Sbjct: 221 ARILRLLGIKMAPFRLHLVCRW 242
>gi|449549139|gb|EMD40105.1| hypothetical protein CERSUDRAFT_132940 [Ceriporiopsis subvermispora
B]
Length = 250
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 142/222 (63%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E K L +E+ + +K+ ++F+V NMRN+ LK VR W
Sbjct: 1 MPKSKRAKLVSLTKVSKKTREHKNALLNEVQENADKWQYCWLFAVGNMRNAHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E +H ++ +KGQ GL+FT+ +VL WF +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEHRMGLHKLAKQIKGQVGLMFTDSPPQEVLDWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DFA+SG +T+ V L EGP+ PE FPH+ +PQLR+LGL+T + +GV TL
Sbjct: 121 QQPDFARSGNRATQTVILPEGPVMQQHSTPPEPFPHNEDPQLRKLGLRTTMKRGVPTLDT 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC+KG LT EQA++LKL+ KM FKV L + G
Sbjct: 181 PHTVCEKGKKLTSEQAQLLKLIGIKMITFKVGLRARWEAASG 222
>gi|328770176|gb|EGF80218.1| hypothetical protein BATDEDRAFT_88631 [Batrachochytrium
dendrobatidis JAM81]
Length = 221
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 140/213 (65%), Gaps = 4/213 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L+K KKG K+NL +E+ ++V+KY I+VF V NMRN LK+VRNDW
Sbjct: 1 MPKSKRSKIYNLTKADKKGKPAKENLFNEIRESVDKYAYIYVFEVMNMRNVYLKEVRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
SR F G+N+VMA ALG ++E E + N+ +S L G GLLFTN + ++V +F+ +
Sbjct: 61 SGSRIFLGRNRVMAKALGTTEESEYKLNLRELSLKLVGDVGLLFTNSTPEEVKKYFEGKK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE----FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVC 176
+ D+A+SG I+ ++ + +GP+ FP+++EP LR LG+ T L GV+ L +T+C
Sbjct: 121 ESDYARSGTIAESEIIIPQGPVMRGELNFPNNMEPHLRSLGMPTMLVNGVIQLASPYTIC 180
Query: 177 KKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
KKG LTPEQA +LK +A+F ++ +Y+
Sbjct: 181 KKGATLTPEQAHLLKHFGFHLAEFHIIPKYYYH 213
>gi|388852234|emb|CCF54045.1| related to MRT4-mRNA turnover 4 [Ustilago hordei]
Length = 311
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 144/220 (65%), Gaps = 7/220 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP++KR K ++L++T KK E K NL D++ A ++Y +++ +MRN+ LK+VR+ W
Sbjct: 1 MPRAKRAKVISLTRTDKKTKEDKANLIDKVRDAAQEYPYVWMLGHHSMRNNYLKEVRDLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGK KV+A ALG S+E+E+ + I +S L G GLLFT+ +V+ WF+ Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMSEEEEVRRGISGISQRLSGDVGLLFTDSPPAEVIDWFNDYQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
DFA+ G +TE +EL EGP+ P+ PH +EPQLRQLG+ T L +G+ TL K++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLKNY 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VCK+G LT QA+ILK + MA F+++ +++ +
Sbjct: 181 LVCKQGQTLTSNQAQILKHILVHMAAFRLIPLAYWSAADA 220
>gi|302767162|ref|XP_002967001.1| hypothetical protein SELMODRAFT_86951 [Selaginella moellendorffii]
gi|300164992|gb|EFJ31600.1| hypothetical protein SELMODRAFT_86951 [Selaginella moellendorffii]
Length = 219
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 2/200 (1%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFG 68
VTLSKT KKG E K+++ + KA E++ ++VFS +NMRN K K +R++ K S RFF G
Sbjct: 2 VTLSKTKKKGREHKESIVTAVRKASEEFRELYVFSFENMRNGKFKALRDELKSSTRFFLG 61
Query: 69 KNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSG 128
NKV+ A+GK DE+++ IH S L G G+LFTN ++V F +E+ DFA++G
Sbjct: 62 SNKVLQIAIGKGPSDEVKEGIHKASEFLCGNTGMLFTNLPNEEVARIFTDFEELDFARTG 121
Query: 129 FISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
+TE VEL EGPL +F H +EP LR+ G+ LN+GVV L D+TVC++G+ ++PE +R
Sbjct: 122 STATETVELNEGPLEQFTHEMEPFLRKQGMPVRLNRGVVELVGDYTVCREGEAISPEASR 181
Query: 189 ILKLLKKKMAKFKV-LLYLW 207
IL+LL KMA F++ +L W
Sbjct: 182 ILRLLGVKMAPFRMSVLCRW 201
>gi|388492048|gb|AFK34090.1| unknown [Lotus japonicus]
Length = 233
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K+VTLSKT KKG E K+ + + + A EKY++++VFS +NMRN K K+ R+
Sbjct: 1 MPKSKRNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDQL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K S RFF G NKVM ALG+S DEI+ ++ VS L+G G+ FTN SK++V F+ Y
Sbjct: 61 KSSSRFFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G I+TE V+L+EGPL +F H +EP LR+ G+ LNKGVV L D VC++G
Sbjct: 121 EEYDFARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180
Query: 180 DVLTPEQ 186
L+PE
Sbjct: 181 KPLSPEH 187
>gi|402223272|gb|EJU03337.1| hypothetical protein DACRYDRAFT_78248 [Dacryopinax sp. DJM-731 SS1]
Length = 253
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 8/228 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+KT KK E K L +++ + V K+ ++VF V +MRN LKDVR W
Sbjct: 1 MPKSKRSKVVSLTKTDKKTKENKAKLIEDIKENVSKWKYVYVFDVSDMRNGALKDVRKAW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K + R FFG+NKVMA ALG S+E+E++ + +++ L+G GL FT+ K++ WFD +
Sbjct: 61 KGTGRLFFGRNKVMAKALGTSEEEELKPQLRKLANRLEGPVGLFFTDWEKEETKAWFDDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPE-------FPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
+DFA++G I+++ V L GP+ + FPHS+EPQLR+LGL T L +G+ ++
Sbjct: 121 RQKDFARAGNIASQTVTLPAGPIVQYNDPDSPFPHSMEPQLRKLGLSTKLVRGIPSVETP 180
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
H VC G L+ EQA++LKLL +MA+F+V L + + G E +++
Sbjct: 181 HVVCTVGKKLSSEQAQLLKLLGVQMAEFRVRLRAMWTEDGGVEEFVIE 228
>gi|323507848|emb|CBQ67719.1| related to MRT4-mRNA turnover 4 [Sporisorium reilianum SRZ2]
Length = 306
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 142/220 (64%), Gaps = 7/220 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP++KR K V+L++T KK E K NL D++ A ++Y +++ +MRN+ LK+VR+ W
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGK KV+A ALG ++E+E+ I +S L G GLLFT +V+ WF Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
DFA+ G +TE +EL EGP+ P+ PH +EPQLRQLG+ T L +G+ TL +++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
TVCK+G LT QA+ILK + MA F+++ +++ +
Sbjct: 181 TVCKQGQTLTANQAQILKHILVHMAAFRLIPLAYWSAADA 220
>gi|392576324|gb|EIW69455.1| hypothetical protein TREMEDRAFT_44005 [Tremella mesenterica DSM
1558]
Length = 245
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/225 (43%), Positives = 145/225 (64%), Gaps = 12/225 (5%)
Query: 1 MPKSKRDKKVTLSKT-VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR K TLSKT ++ K +L +EL V+ + ++++FSV +MRN LKDVR
Sbjct: 1 MPKSKRAKVTTLSKTPLRSTKASKASLVNELRSQVDNFPHVWLFSVGDMRNEGLKDVRGQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
W+ + RFFFGK KVMA ALG S EDE + ++H+++ ++G GL TN D+ WF+
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDSPEDEYQPDLHLLARCIRGPVGLFLTNFPVDETREWFET 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL--PE--------FPHSIEPQLRQLGLQTNLNKGVVT 168
+ +++A+ G +T+ + L GP+ P FPHS+EPQLR LGL T L +GV +
Sbjct: 121 WSKKEYARMGAKATQTITLPAGPILSPHTDPPTGDPFPHSMEPQLRALGLSTTLVRGVPS 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L H +C++G+ L+ EQ R+LKLL +MA+F++LL ++K EG
Sbjct: 181 LNHAHILCQQGEKLSSEQCRLLKLLGIQMAEFRILLGSRWSKDEG 225
>gi|170089957|ref|XP_001876201.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649461|gb|EDR13703.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 252
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 141/227 (62%), Gaps = 9/227 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E K + +EL EK+ ++F V MRNS LK VR W
Sbjct: 1 MPKSKRSKVVSLTKVSKKTKEHKNAMINELQTNAEKWRYCWLFEVGAMRNSHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E +H ++ +KGQ GL FT+ +V+ WF +
Sbjct: 61 KDSARMFFGRGAVMAKALGTTLEEEHRVGLHKLAKQIKGQVGLFFTDTEPQEVIEWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DFA++G I++ V L GP+ PE FPH+ EPQLR+LGL T++N+GV TL
Sbjct: 121 QQPDFARAGNIASRTVILPLGPVMRHHSDPPEPFPHNEEPQLRKLGLTTSMNRGVPTLTA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
H +C +G VLT EQA++LKL+ +KM F+V L ++ G E +
Sbjct: 181 PHKLCTQGKVLTAEQAQLLKLIGEKMVVFRVGLIARWDSTSGEVEQI 227
>gi|336369989|gb|EGN98330.1| hypothetical protein SERLA73DRAFT_183279 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382746|gb|EGO23896.1| hypothetical protein SERLADRAFT_470348 [Serpula lacrymans var.
lacrymans S7.9]
Length = 270
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 154/252 (61%), Gaps = 17/252 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + V+L++ KK E K L +E+ K EK+ ++F V MRN+ LK VR W
Sbjct: 1 MPKSKRAQLVSLTQVSKKTREHKNALLEEVQKNAEKWKYCWLFEVGAMRNAHLKIVRKLW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD +R FFG+ VMA ALG + E+E + +H ++ +KGQ GL FT+ +V+ WFD +
Sbjct: 61 KDTARIFFGRGAVMAKALGTTLEEEHREGLHKLAKQIKGQVGLFFTDSEPQEVIEWFDDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA+SG I+T V L GP+ PE FPH+ EPQLR+LGL T++ +GV TL
Sbjct: 121 RQPDFARSGNIATRTVILPAGPVMRVHSDPPEPFPHNEEPQLRKLGLTTSMKRGVPTLEA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
H +C+KG VL+PEQ ++LKL+ +KM F+V L ++ + G E T ++ +
Sbjct: 181 PHKLCEKGKVLSPEQTQLLKLVGEKMVVFRVALLARWDSENG--------EVTQIENSGL 232
Query: 232 EDDENNSNEESD 243
+++ N E+ D
Sbjct: 233 GEEKGNDEEDED 244
>gi|58264330|ref|XP_569321.1| ribosomal protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108204|ref|XP_777053.1| hypothetical protein CNBB2850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259738|gb|EAL22406.1| hypothetical protein CNBB2850 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223971|gb|AAW42014.1| ribosomal protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 245
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 144/229 (62%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDKKVTLSKT-VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR K TLSKT V+ KQ L +E+ + V+KY+ ++FSV +MRN LK+VR
Sbjct: 1 MPKSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
W+ + RFFFGK KVMA ALG++ E E + + ++ LKGQ GL FT+ D+ + WFD
Sbjct: 61 WRGTGRFFFGKGKVMAKALGETPETEYQDGLSQIAKRLKGQIGLFFTSHPVDETVEWFDS 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL-------PE---FPHSIEPQLRQLGLQTNLNKGVVT 168
+ ++A+ G ST D+ L GPL P FPHS+EPQLR LGL T+L +G+ +
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTEPPSGDPFPHSMEPQLRALGLTTSLVRGIPS 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
L H +C KG+ L+ E+ RILKLL +MA F++ L ++K+ G E
Sbjct: 181 LNNPHVLCVKGEKLSSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEG 229
>gi|405118522|gb|AFR93296.1| hypothetical protein CNAG_03789 [Cryptococcus neoformans var.
grubii H99]
Length = 245
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 143/229 (62%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDKKVTLSKT-VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR + TLSKT ++ KQ L +E+ + V+KY+ ++FSV +MRN LK+VR
Sbjct: 1 MPKSKRSRLTTLSKTPIRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
W+ + RFFFGK KVMA ALG + E E + + ++ LKGQ GL FT+ D+ + WFD
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDTPETEYQDGLSQIAKRLKGQIGLFFTSHPVDETVEWFDS 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL-------PE---FPHSIEPQLRQLGLQTNLNKGVVT 168
+ ++A+ G ST D+ L GPL P FPHS+EPQLR LGL T+L +G+ +
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTEPPSGDPFPHSMEPQLRALGLTTSLVRGIPS 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
L H +C KG+ LT E+ RILKLL +MA F++ L ++K+ G E
Sbjct: 181 LNNPHVLCVKGEKLTSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEG 229
>gi|344240735|gb|EGV96838.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 206
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 133/211 (63%), Gaps = 24/211 (11%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
V+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN WK SR FFGK
Sbjct: 1 VSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRMFFGK 60
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
NKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y + DFA++G
Sbjct: 61 NKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGN 120
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+T V L GPL +F HS EPQLR+LGL L K+G
Sbjct: 121 KATLTVSLNPGPLKQFLHSTEPQLRRLGLPIALK-------------KEG---------- 157
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
KL +MA+FKV + ++ + G F+ + D
Sbjct: 158 -KLFGYEMAEFKVTIKYMWDAQSGRFQQMDD 187
>gi|395331170|gb|EJF63552.1| mRNA turnover protein 4-like protein [Dichomitus squalens LYAD-421
SS1]
Length = 248
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E K L E+ + +K+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRSKVVSLTKVAKKTREDKNALLAEVQENADKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD +R FFG+ VMA ALG + +E +H +++ ++GQ GL FT+ +VL WF +
Sbjct: 61 KDTARMFFGRGAVMAKALGTTPAEEHRPGLHKLATQIRGQVGLFFTDSPPAEVLEWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA++G + V L GP+ PE FPH+ EPQLR+LGL+T + +GV TL
Sbjct: 121 AQPDFARAGNRAARTVVLPAGPVMQQHAQPPEPFPHNEEPQLRRLGLRTRMERGVPTLDA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC+KG LTPEQA++LKL+ +M FKV L ++ G
Sbjct: 181 PHTVCEKGRALTPEQAQLLKLVGIRMVTFKVGLRARWDAATG 222
>gi|392591687|gb|EIW81014.1| hypothetical protein CONPUDRAFT_123878 [Coniophora puteana
RWD-64-598 SS2]
Length = 248
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 150/252 (59%), Gaps = 16/252 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V+L+K KK E K L +E+ + +EK+ ++F V MRN+ LK VR W
Sbjct: 1 MPRSKRAKIVSLTKVAKKTREDKSTLIEEVQQNIEKWKYCWLFEVGAMRNAYLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E +H ++ +KGQ GLLFT+ +V WFD +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTVEEEHRPGLHKLAKQIKGQVGLLFTDSEPSEVTEWFDDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA++G ++T V L GP+ PE FPH+ EPQLR+LGL T + +GV TL
Sbjct: 121 HPPDFARAGNLATRTVTLPAGPVLRVHSDPPEPFPHNEEPQLRKLGLGTVMKRGVPTLDA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
H VC +G LT EQA++LKL+ ++M +F+V++ + + G + +
Sbjct: 181 PHRVCAEGKPLTAEQAQLLKLIGERMVEFRVVMRARWEAESGEVTQV-------GSGVVV 233
Query: 232 EDDENNSNEESD 243
ED+E S E+ +
Sbjct: 234 EDEEGKSGEDEE 245
>gi|443896202|dbj|GAC73546.1| protein involved in mRNA turnover [Pseudozyma antarctica T-34]
Length = 314
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 140/220 (63%), Gaps = 7/220 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP++KR K V+L++T KK E K NL D++ A ++Y +++ +MRN+ LK+VR+ W
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKENKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGK KV+A ALG ++E+E+ I +S L G GLLFT+ +V+ WF Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTDSPPAEVMDWFKDYQ 120
Query: 121 DEDFAKSGFISTEDVELKEG-------PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
DFA+ G +TE +EL EG P PH +EPQLRQLG+ T L +G+ TL +++
Sbjct: 121 RVDFARGGSKATETIELPEGAVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VCK+G LT QA+ILK + MA+F+++ +++ +
Sbjct: 181 VVCKEGQTLTSNQAQILKHILVHMAQFRLIPLAYWSAADA 220
>gi|71003598|ref|XP_756465.1| hypothetical protein UM00318.1 [Ustilago maydis 521]
gi|46096070|gb|EAK81303.1| hypothetical protein UM00318.1 [Ustilago maydis 521]
Length = 315
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP++KR K V+L++T KK E K NL D++ A ++Y +++ +MRN+ LK+VR+ W
Sbjct: 1 MPRAKRAKVVSLTRTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGK KV+A ALG ++E+E+ I +S L G GLLFT +V+ WF Y+
Sbjct: 61 KGSKIFFGKLKVLALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQ 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
DFA+ G +TE +EL EGP+ P+ PH +EPQLRQLG+ T L +G+ TL +++
Sbjct: 121 RVDFARGGSKATETIELPEGPVMARSNPPDTLPHPVEPQLRQLGMPTELRRGIPTLLQNY 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
VCK+G LT QA+ILK + MA F+++ +++ +
Sbjct: 181 VVCKEGQTLTSNQAQILKHILVHMAAFRLIPLAYWSAADA 220
>gi|387219579|gb|AFJ69498.1| mrna turnover 4-like protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 142/220 (64%), Gaps = 4/220 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+RD+KV+L+KT KG E+K ++ +A++ + +++VFS Q+MR+SK KDVR DW
Sbjct: 22 MPRSRRDQKVSLTKTTSKGKEQKAGTIAKVREALDSFTSLYVFSFQHMRSSKFKDVRIDW 81
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DSRFF GKNKVM ALG EDE N+ +S L GQ GLL TNRS+++VL +F+ ++
Sbjct: 82 RDSRFFMGKNKVMQKALGLLPEDEFRDNLRFLSKRLSGQVGLLATNRSREEVLTYFENFK 141
Query: 121 DEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+DFAK G I+ DV L+ PL FP S+ R+LGL G + L + VC+K
Sbjct: 142 VQDFAKPGVIADADVTLEPSKDPLHFFPTSMFQLFRKLGLNLETKNGKLVLLEAFPVCRK 201
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
G +TPEQA+++ L + F++ L + ++G FE L
Sbjct: 202 GKAITPEQAKLMTHLDLPLVDFRIRLVCCW--RDGEFEEL 239
>gi|242213127|ref|XP_002472393.1| hypothetical mRNA turnover protein 4-like protein [Postia placenta
Mad-698-R]
gi|220728469|gb|EED82362.1| hypothetical mRNA turnover protein 4-like protein [Postia placenta
Mad-698-R]
Length = 257
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 140/222 (63%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E+K L E+ + +K+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRSKVVSLTKVAKKTREQKNALLKEVQENSDKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E +H ++ +KGQ GL FT+ +V+ WF+ +
Sbjct: 61 KDSARMFFGRGAVMAKALGMTPEEEHRLGLHKLAKQIKGQVGLFFTDTPPAEVIAWFEDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA++G + V L GP+ PE FPH+ EPQLR+LGL+T++ +GV TL
Sbjct: 121 SQPDFARTGNAAPRTVVLPTGPVMQQHSEPPEPFPHNEEPQLRKLGLRTSMVRGVPTLTA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC++G ++PEQA++LKL+ +M +F++ L + G
Sbjct: 181 PHTVCERGKAISPEQAQLLKLVGLRMVRFRLGLRARWEAASG 222
>gi|301768423|ref|XP_002919633.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog
[Ailuropoda melanoleuca]
Length = 242
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNI-FVFSVQNMRNSKLKDVRND 59
MPKS+RDKKV+L+ T KKGLE KQNL +EL + V+ Y + F+FSV NMR SKLKDV
Sbjct: 1 MPKSERDKKVSLTGTAKKGLELKQNLTEELQRHVDTYKYLLFIFSVANMRXSKLKDVWTA 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
WK S FFGK+KVM AL S DE + N+ VS +G+ GLL T R+K++V F +
Sbjct: 61 WKHSWVFFGKHKVMTVALDGSPSDECKDNLSQVSKKWRGEVGLLATKRTKEEVYGGFMKH 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFP-HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+ DF G +T + L G P H++EP+ RQLGL T L +GVVTL D VCK+
Sbjct: 121 MEMDFTGVGDKATFTMSLAPGGPGAAPHHTMEPRQRQLGLLTALKRGVVTLLSDQEVCKE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLL-YLW 207
GDVL+PEQA +L +MA+ KV + Y+W
Sbjct: 181 GDVLSPEQAHEPELFGCEMAESKVTIKYMW 210
>gi|426196012|gb|EKV45941.1| hypothetical protein AGABI2DRAFT_207369 [Agaricus bisporus var.
bisporus H97]
Length = 241
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V+L+K KKG E K +L +E+ + V+K+ ++F V N+RNS L VR W
Sbjct: 1 MPQSKRSKLVSLTKVAKKGKEHKSSLMNEIQENVDKWRYCWLFEVGNLRNSHLSTVREQW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ +R FFGK KVMA ALG + E+E IH ++ +KGQ G++FT+ +V+ WF +
Sbjct: 61 RGTARIFFGKGKVMAKALGLTPEEERCTGIHKLAKHIKGQVGIMFTDSEPQEVIDWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DF ++G ++ V L GP+ PE FPH+ EPQLR+LGL T LN+GV TL
Sbjct: 121 QRPDFGRAGNKASRTVILPAGPVMRTYSDPPEPFPHNEEPQLRKLGLTTRLNRGVPTLDA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
H VC++G LT EQA++LKL+ ++M F+V L ++ G
Sbjct: 181 PHKVCEEGRELTAEQAQLLKLIGERMVMFRVSLLCHFDSATG 222
>gi|392566196|gb|EIW59372.1| mRNA turnover protein 4-like protein [Trametes versicolor FP-101664
SS1]
Length = 256
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/222 (44%), Positives = 139/222 (62%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E K E+ + +K+ ++F V NMRNS LK VR W
Sbjct: 1 MPKSKRSKIVSLTKVAKKTREDKNVFLQEIQENADKWQYCWLFEVGNMRNSHLKTVRKLW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD +R FFG+ VMA ALG + +E +H ++ +KGQ GL FT+ + ++V+ WF +
Sbjct: 61 KDTARIFFGRGAVMAKALGATPAEEHRLGLHKLAKQIKGQVGLFFTDTAPEEVVDWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DFA++G +T V L GP+ PE FPH+ EPQLR+LGL+T +++GV TL
Sbjct: 121 QQPDFARTGNRATRAVVLPAGPVMQQHATPPEPFPHNEEPQLRKLGLRTRMDRGVPTLDV 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC+ G VLTPEQ ++LKL+ +M FKV L + + G
Sbjct: 181 PHTVCEAGRVLTPEQTQLLKLIGIRMVTFKVGLRARWEAESG 222
>gi|409079103|gb|EKM79465.1| hypothetical protein AGABI1DRAFT_74528 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 241
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V+L+K KKG E K +L +E+ + V+K+ ++F V N+RNS L VR W
Sbjct: 1 MPQSKRSKLVSLTKVAKKGKEHKSSLMNEIQENVDKWRYCWLFEVGNLRNSHLSTVREQW 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ +R FFGK KVMA ALG + E+E IH ++ +KGQ G++FT+ +V+ WF +
Sbjct: 61 RGTARIFFGKGKVMAKALGLTPEEERCTGIHKLAKHIKGQVGIMFTDSEPQEVIDWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DF ++G ++ V L GP+ PE FPH+ EPQLR+LGL T LN+GV TL
Sbjct: 121 QRPDFGRAGNKASRTVILPAGPVMRTYSDPPEPFPHNEEPQLRKLGLATRLNRGVPTLDA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
H VC++G LT EQA++LKL+ ++M F+V L ++ G
Sbjct: 181 PHKVCEEGRELTAEQAQLLKLIGERMVMFRVNLLCHFDSATG 222
>gi|389744852|gb|EIM86034.1| hypothetical protein STEHIDRAFT_80204 [Stereum hirsutum FP-91666
SS1]
Length = 253
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 141/229 (61%), Gaps = 9/229 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E+K + + +EK+ ++F V NMRN+ LK VRN W
Sbjct: 1 MPKSKRQKLVSLTKVAKKTKEQKGAQLTAIQENLEKWKYCWLFEVGNMRNAHLKTVRNLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R +FG+ +MA ALG + EDE I ++ +KGQ GL FT+ D+V+ WF +
Sbjct: 61 KDSARMYFGRGALMAKALGTTPEDEHRPGISQLTPQIKGQVGLFFTDTEPDEVIEWFKDF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA++G ++ V L GP+ PE FPH+ EPQLR+LGL T + KGV T+
Sbjct: 121 RQPDFARAGNRASRTVILPAGPVMQHHSDPPEPFPHNEEPQLRKLGLTTVMKKGVPTIDT 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
H +C+KG VLTPEQA++LKL +KM +F+V L + + G + D
Sbjct: 181 PHKLCEKGKVLTPEQAQLLKLTGEKMIEFRVGLKARWTAETGKVVQIED 229
>gi|321251805|ref|XP_003192184.1| ribosomal protein [Cryptococcus gattii WM276]
gi|317458652|gb|ADV20397.1| Ribosomal protein, putative [Cryptococcus gattii WM276]
Length = 245
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 142/229 (62%), Gaps = 12/229 (5%)
Query: 1 MPKSKRDKKVTLSKT-VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR K TLSKT ++ KQ L +E+ + V+KY+ ++FSV +MRN LK+VR
Sbjct: 1 MPKSKRSKLTTLSKTPIRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
W+ + RFFFGK KVMA ALG + E E + + ++ LKGQ G+ FT+ D+ + WF+
Sbjct: 61 WRGTGRFFFGKGKVMAKALGDTPETEYQDGLSQIAKRLKGQIGIFFTSHPVDETVEWFES 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL-------PE---FPHSIEPQLRQLGLQTNLNKGVVT 168
+ ++A+ G ST D+ L GPL P FPHS+EPQ R LGL T+L +G+ +
Sbjct: 121 WHKPEYARMGAKSTMDITLPAGPLLTPFTDPPSGDPFPHSMEPQFRALGLTTSLVRGIPS 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
L H +C KG+ L+ E+ RILKLL +MA F++ L ++K+ G E
Sbjct: 181 LNNPHVLCVKGEKLSSEKCRILKLLAIQMADFRIHLGSRWSKESGFVEG 229
>gi|388582743|gb|EIM23047.1| mRNA turnover protein 4-like protein, partial [Wallemia sebi CBS
633.66]
Length = 215
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 138/215 (64%), Gaps = 8/215 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R+K V+L++T KK E K+ L D + +A ++ ++ +MRNS LKDVR W
Sbjct: 1 MPKSRRNKLVSLTETEKKTREHKEALVDLIRQAADENKYCWIIEAGDMRNSSLKDVRAAW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K + R FFG+ KVMA ALG + E + ++ +S L G GL FTN +++V WFD +
Sbjct: 61 KGTGRLFFGRLKVMAIALGTTPETSHKPELYKLSEHLSGSAGLFFTNWDENEVKEWFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPE------FPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
DFA++G ++T+ +EL+EGP+ PH++EP LR+LGL T+L KGV TL H
Sbjct: 121 SKPDFARTGNVATQTIELEEGPIIHRPSGDTLPHTLEPSLRKLGLSTSLLKGVPTLLSAH 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLW 207
TVCK+G L+ EQA+I+K L M+ FK+ + LW
Sbjct: 181 TVCKEGQTLSAEQAQIIKHLGVMMSNFKLQVKALW 215
>gi|393242959|gb|EJD50475.1| hypothetical protein AURDEDRAFT_112140 [Auricularia delicata
TFB-10046 SS5]
Length = 250
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 13/252 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SK+ K V+L+K +K E K N L + +K+ +VF V NMRN+ LKD+R W
Sbjct: 1 MPRSKKAKVVSLTKVDRKTRENKANHITILQECADKWKYCYVFQVANMRNTYLKDIRVRW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD+ R FFG+N V+ ALG ++ +E + + ++ L G G+ FT+ + WF Y
Sbjct: 61 KDTGRMFFGRNTVVVKALGATEAEEHKPGLSKLNKHLSGTVGVFFTDHDPAETEAWFAHY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
D+A++G +T VEL GP+ PE F H++EPQLR+LGL T L +GV TL
Sbjct: 121 TQADYARAGNRATRAVELPAGPIMNRESDPPEQFQHTMEPQLRRLGLATRLERGVPTLAA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
H VCK+GDVLT EQA+ILKL+ +++A F+V L ++ G L + P +
Sbjct: 181 PHVVCKQGDVLTAEQAQILKLIGERLATFRVRLLCRWSADTGAVVELAE----PEPVEAG 236
Query: 232 EDDENNSNEESD 243
+DD +E D
Sbjct: 237 QDDAEVEDEGMD 248
>gi|401886706|gb|EJT50731.1| ribosomal protein [Trichosporon asahii var. asahii CBS 2479]
gi|406698645|gb|EKD01879.1| ribosomal protein [Trichosporon asahii var. asahii CBS 8904]
Length = 244
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/248 (42%), Positives = 152/248 (61%), Gaps = 17/248 (6%)
Query: 1 MPKSKRDKKVTLSKT-VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR + TLSKT ++ K L +E+ KA+++Y+++F+FSV +MRN LK+VR
Sbjct: 1 MPKSKRQRVTTLSKTPIRTTKASKAALVNEIQKAIDEYDHVFLFSVGDMRNEGLKEVRQQ 60
Query: 60 WKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
W+ + R FFGK +VMA ALG + E E E+ + + LKG GL T+ +D WFD
Sbjct: 61 WRGTGRMFFGKTRVMAKALGINDETEYEEGLGQLGRRLKGPVGLFLTSHPVEDTKEWFDT 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL----------PEFPHSIEPQLRQLGLQTNLNKGVVT 168
+ +++A+ G +TE + L +GPL PHS++PQLRQLGL T L KGV +
Sbjct: 121 WVKKEYARQGNPATETITLPKGPLLTPYSADGSGDPLPHSMDPQLRQLGLDTLLVKGVPS 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL-LDREKTPMD 227
L ++ +CK+G+ L+ E+ RILKLL +MA+FK+ L ++K G E LD E MD
Sbjct: 181 LREETVLCKEGEKLSSEKCRILKLLAIQMAEFKIHLGSHWSKGTGFVEGKELDAEGEGMD 240
Query: 228 IYDMEDDE 235
EDD+
Sbjct: 241 ----EDDD 244
>gi|396476910|ref|XP_003840151.1| similar to mRNA turnover protein 4 homolog [Leptosphaeria maculans
JN3]
gi|312216722|emb|CBX96672.1| similar to mRNA turnover protein 4 homolog [Leptosphaeria maculans
JN3]
Length = 235
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 135/221 (61%), Gaps = 12/221 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E L + +A + Y +IFVFSV+NMRNS LK+VR ++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNYGHIFVFSVENMRNSYLKEVRQEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ L G GLLFTNR+ +++ +F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSKLTEYLTGNVGLLFTNRAPSEIIEYFATYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T+ V + G LPE PHS+E +R+ G+ T L +G +
Sbjct: 121 QTDFARAGVVATQTFTVPAGVVYSRGGELPEDDDVPLPHSVETTVRKWGMPTRLVQGKIV 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L +TVC++G V+ Q +LK+ MA FK+ L +Y
Sbjct: 181 LDAPYTVCEEGKVMNSHQTALLKMFGVAMADFKIDLKAYYT 221
>gi|302689811|ref|XP_003034585.1| hypothetical protein SCHCODRAFT_66900 [Schizophyllum commune H4-8]
gi|300108280|gb|EFI99682.1| hypothetical protein SCHCODRAFT_66900 [Schizophyllum commune H4-8]
Length = 252
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 134/222 (60%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K K+ E K L ++ + VEK+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRAKVVSLTKVAKRTKEEKGELITQIQENVEKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R F ++ VMA ALG + E E + ++ LKGQ GL FTN +V WF +
Sbjct: 61 KDSGRLVFARSTVMAKALGTTPESEHRPGVSKLARQLKGQVGLFFTNSPPSEVTEWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
+ DFA++G + V L GP+ PE FPH+ EPQLR+LGL T +N+GV +L
Sbjct: 121 QQPDFARAGNTAPRTVVLPAGPVMQRHSDPPEPFPHNEEPQLRKLGLTTYMNRGVPSLHA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
H +C+ G LT EQA++LKL+ +KM F+V L ++ + G
Sbjct: 181 PHKICEAGHKLTAEQAQLLKLIGEKMVTFRVGLLARWDAETG 222
>gi|108862073|gb|ABA95602.2| ribosomal protein L10 containing protein [Oryza sativa Japonica
Group]
Length = 383
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 131/216 (60%), Gaps = 16/216 (7%)
Query: 10 VTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFF 67
VTLSKT KK GLERK + ++ AVE Y N +VF+ NMRN KLKD+R K S R F
Sbjct: 146 VTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFL 205
Query: 68 GKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS 127
KVM ALG+S DE + +H +S L+G GL FTN +DDV F +E+ DFA++
Sbjct: 206 AGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFART 265
Query: 128 GFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
G I+TE VELKEGPL +F H +EP LR+ G+ LNKG V L DH VC++G ++PE A
Sbjct: 266 GSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISPEAA 325
Query: 188 RIL--------------KLLKKKMAKFKVLLYLWYN 209
+ L +LL +MA F++ L ++
Sbjct: 326 QTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWS 361
>gi|168038066|ref|XP_001771523.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677250|gb|EDQ63723.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 141/213 (66%), Gaps = 1/213 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRN-SKLKDVRND 59
MPKSKR+K VTLSKT KK E+K++L + +++Y ++++FS +NMRN +
Sbjct: 1 MPKSKRNKLVTLSKTKKKDKEQKESLVKSVRDCLDQYTSLYIFSFENMRNIKFKEFKEKL 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
SRFF G NKV+ ALGKS+ +E ++ +H S + G CGL FTN K +V+ F +
Sbjct: 61 KSSSRFFLGGNKVLQIALGKSEAEEQKEGLHQASELIHGFCGLFFTNLPKSEVIRGFQEF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G ++TE VEL+EGPL +F H +EP LR+ G+ LN+GVV L D+TVC +G
Sbjct: 121 EELDFARTGSVATETVELQEGPLEQFSHDMEPFLRKQGMPVRLNRGVVELVADYTVCTEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
+ ++P+ +RIL+LL +MA FK+ L + E
Sbjct: 181 ENISPQASRILRLLGVQMAAFKMHLRCRWTPNE 213
>gi|403414834|emb|CCM01534.1| predicted protein [Fibroporia radiculosa]
Length = 257
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 137/222 (61%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK E K L E+ + EK+ ++F V NMRN+ LK VR W
Sbjct: 1 MPKSKRAKLVSLTKVEKKTREHKNALLKEVQENAEKWQYCWLFEVGNMRNAHLKTVRKLW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS R FFG+ VMA ALG + E+E +H ++ +KGQ GL FT+ ++V+ WF +
Sbjct: 61 KDSARIFFGRGAVMAKALGTTPEEEHRSGLHKLAKQIKGQVGLFFTDSPPEEVIEWFADF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFK 171
DFA+SG +T V L GP+ PE FPH+ EPQLR+LGL+T + +GV TL
Sbjct: 121 RQPDFARSGNKATRTVLLPAGPVMQQHSLPPEPFPHNEEPQLRKLGLRTRMERGVPTLDA 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
HTVC KG VLT EQA++LKL+ K+ FKV L + G
Sbjct: 181 PHTVCSKGRVLTAEQAQLLKLVGLKLVNFKVGLRARWEAASG 222
>gi|222616471|gb|EEE52603.1| hypothetical protein OsJ_34924 [Oryza sativa Japonica Group]
Length = 319
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 132/217 (60%), Gaps = 16/217 (7%)
Query: 9 KVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFF 66
+VTLSKT KK GLERK + ++ AVE Y N +VF+ NMRN KLKD+R K S R F
Sbjct: 81 EVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIF 140
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
KVM ALG+S DE + +H +S L+G GL FTN +DDV F +E+ DFA+
Sbjct: 141 LAGKKVMQIALGRSPADEAKTGLHKLSKFLQGDTGLFFTNLPRDDVERLFREFEEHDFAR 200
Query: 127 SGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQ 186
+G I+TE VELKEGPL +F H +EP LR+ G+ LNKG V L DH VC++G ++PE
Sbjct: 201 TGSIATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGAVELVADHIVCEEGKPISPEA 260
Query: 187 ARIL--------------KLLKKKMAKFKVLLYLWYN 209
A+ L +LL +MA F++ L ++
Sbjct: 261 AQTLIGIFDDVNIVTKPMRLLGMQMATFRLYLVCRWS 297
>gi|19112513|ref|NP_595721.1| mRNA turnover and ribosome assembly protein Mrt4 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|51316543|sp|Q9USZ6.1|MRT4_SCHPO RecName: Full=mRNA turnover protein 4 homolog
gi|6165479|emb|CAB59805.1| mRNA turnover and ribosome assembly protein Mrt4 (predicted)
[Schizosaccharomyces pombe]
Length = 241
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 140/230 (60%), Gaps = 12/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R K +TL++T KKG E K L + ++++ ++ +++F V NMRN+ LK +R+DW
Sbjct: 1 MPKSRRSKVLTLAQTEKKGHEGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR F GK KVMA ALG + E+E +N+ ++ L G GLLFTN D+V+ +F+ +
Sbjct: 61 KGSRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + GP+ + P H++EPQ+RQLG+ T L GVVT
Sbjct: 121 QNDFARAGAVAPFTHVIPAGPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D +C +G L Q R+LKL A+FKV L +Y+KK + E L
Sbjct: 181 LLADFPLCTEGQQLDSRQTRLLKLFGITAAEFKVGLLGYYSKKGASVEFL 230
>gi|213407682|ref|XP_002174612.1| mRNA turnover protein MRT4 [Schizosaccharomyces japonicus yFS275]
gi|212002659|gb|EEB08319.1| mRNA turnover protein [Schizosaccharomyces japonicus yFS275]
Length = 242
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 140/230 (60%), Gaps = 12/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+R + VTL++T KKG + K L + A++++ +VF V NMRN+ LK VR+DW
Sbjct: 1 MPRSRRSRLVTLAQTDKKGRDGKVALYSSIQAALDEFEYAWVFDVANMRNTYLKRVRDDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR F GK KVMA ALG + E+E +N+ ++ L G GLLFT+ ++V +F+ +
Sbjct: 61 KGSRIFMGKTKVMAKALGYTPEEEHAENVSKLTKLLHGSVGLLFTDSKPEEVKGYFESFV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
D+A++G I+ V + EGP+ + P H++EPQ+RQLG+ T L GVVT
Sbjct: 121 QNDYARAGAIAPFSVIIPEGPVYSRAGQIPVEDDILLAHTLEPQVRQLGMPTTLKNGVVT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D T+ K+G+ L Q R+LKL A+FKV L +Y KK T E +
Sbjct: 181 LLTDFTLAKEGEPLDSRQTRLLKLFGITAAEFKVKLLGYYVKKTSTVEYI 230
>gi|440635763|gb|ELR05682.1| hypothetical protein GMDG_07525 [Geomyces destructans 20631-21]
Length = 240
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 135/230 (58%), Gaps = 12/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L++ KKG E L + ++++KY IFVFSV NMRN+ LK VR D
Sbjct: 1 MPKSKRAKVVHLTQVDKKGKELTLKLFANVQESIDKYQYIFVFSVDNMRNTYLKKVRADL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK KVMA ALG + E + N H+++ L G GLLFT+RS +DV F
Sbjct: 61 SDSRLFFGKTKVMAKALGSTPETAYQTNTHLLAPYLAGNVGLLFTDRSPEDVSAHFAANT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEF------------PHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G +T + EG + H +EP+LR+L + T+L+KG +T
Sbjct: 121 PTDFARAGTPATRRFAIPEGIVYSLGGEVAAEDDVPMAHGLEPELRRLNVPTSLSKGNIT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L ++ VC++G VL Q R+LKL A+F+V + +++ + GT E +
Sbjct: 181 LQNEYEVCREGQVLDSRQTRLLKLFGVATAEFRVRVVAYWSAESGTVEEV 230
>gi|226488957|emb|CAX74828.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 131/208 (62%), Gaps = 2/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP S+RDKKV L+K K ++KQ++ ++ + +++Y ++V ++ N R K+ ++R +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHV-AKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D + FG NKV ALGK+ +D +H + LKGQC LLFT S ++ D +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + G + + V + GPLP+FPH++EP LRQLG+ L +GVV L +D+ VC D
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLW 207
VL+PEQ RILKL + +M++F+V LL +W
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVW 207
>gi|226469970|emb|CAX70266.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 131/208 (62%), Gaps = 2/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP S+RDKKV L+K K ++KQ++ ++ + +++Y ++V ++ N R K+ ++R +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHV-AKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D + FG NKV ALGK+ +D +H + LKGQC LLFT S ++ D +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + G + + V + GPLP+FPH++EP LRQLG+ L +GVV L +D+ VC D
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLW 207
VL+PEQ RILKL + +M++F+V LL +W
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVW 207
>gi|403367523|gb|EJY83585.1| hypothetical protein OXYTRI_18686 [Oxytricha trifallax]
Length = 234
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 3/220 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V+L+K +KG E K+ L +++ +AVEKY N FV NMR K+++N
Sbjct: 1 MPKSKRNKIVSLTKVKRKGREAKEELVEKVHEAVEKYKNCFVLQFDNMRTGPFKNIQNAL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DS+FF GKNKVM +LGKS E E N H++S L+GQ LLFT+R++ ++ + +
Sbjct: 61 RDSKFFLGKNKVMQVSLGKSPETEPADNTHLISKYLRGQVCLLFTDRTEKEIQKFIEDNR 120
Query: 121 DEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
D+AK+G +T V L++G L + H +EP LRQLGL T LN + L D VC++
Sbjct: 121 LPDYAKAGTKATFTVFLEKGVQALDAYGHGMEPYLRQLGLPTKLNMQKIELLADTYVCRE 180
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
G+ L+ EQ +ILKLL +MAKF +++ L +G F+ L
Sbjct: 181 GEELSVEQCKILKLLGHQMAKFNMII-LATRTDKGKFKEL 219
>gi|226488955|emb|CAX74827.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 130/208 (62%), Gaps = 2/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP S+RDKKV L+K K ++KQ++ ++ + +++Y ++V ++ N R K+ ++R +
Sbjct: 1 MPTSRRDKKVELTKVQKHAPKKKQHV-AKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D + FG NKV ALGK+ +D +H + LKGQC LLFT S + D +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSKLREQLDAFR 119
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + G + + V + GPLP+FPH++EP LRQLG+ L +GVV L +D+ VC D
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLW 207
VL+PEQ RILKL + +M++F+V LL +W
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVW 207
>gi|157877464|ref|XP_001687049.1| putative 60S acidic ribosomal protein [Leishmania major strain
Friedlin]
gi|68130124|emb|CAJ09434.1| putative 60S acidic ribosomal protein [Leishmania major strain
Friedlin]
Length = 227
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 130/203 (64%), Gaps = 1/203 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND- 59
MPKSKR K V L+KT K E K L + + +A+E Y++++ F + N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR F G NKVM A+G+ +E +N+H +S L G CGLLFTN SK +V +F
Sbjct: 61 AGDSRIFLGNNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+A++G +TE + LK GPLP+FPHS+ L +LGL L++GV+ L +D TVC+ G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV 202
D L+ E A++LKL + AKFK+
Sbjct: 181 DTLSAEAAQLLKLFGVQSAKFKM 203
>gi|407924321|gb|EKG17374.1| Ribosomal protein L10/acidic P0 [Macrophomina phaseolina MS6]
Length = 235
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 134/223 (60%), Gaps = 12/223 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + V LSK KKG E + L + + +A + + IFVF V+NMRN+ LK+VR ++
Sbjct: 1 MPKSKRARVVHLSKVEKKGKELSERLFNNVREAADNFKYIFVFDVENMRNNYLKEVRQEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK KVMA ALG E NIH +++ L+G GL TNR +++ +F Y
Sbjct: 61 SDSRLFFGKTKVMAKALGTDAASEHLPNIHKLAARLEGNVGLFCTNREPSEIIEYFQTYA 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++++ + G P+ E PH +E +R+ G+ T L KG V
Sbjct: 121 QTDFARAGVVASQTFTVPAGVVYSRGGELPVEEDVPLPHPVEVTVRKWGMPTRLEKGKVM 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
L + +TVCK+G+ L Q+ +LKL MA+FK+ L +YNK+
Sbjct: 181 LDQPYTVCKEGETLNSHQSALLKLFGVAMAEFKIKLTAYYNKE 223
>gi|226488959|emb|CAX74829.1| mRNA turnover protein 4 homolog [Schistosoma japonicum]
Length = 266
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 131/208 (62%), Gaps = 2/208 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP S+RDKKV L++ K ++KQ++ ++ + +++Y ++V ++ N R K+ ++R +
Sbjct: 1 MPTSRRDKKVELTEVQKHAPKKKQHV-AKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNM 59
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D + FG NKV ALGK+ +D +H + LKGQC LLFT S ++ D +
Sbjct: 60 PDIKLLFGINKVTVLALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFR 119
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + G + + V + GPLP+FPH++EP LRQLG+ L +GVV L +D+ VC D
Sbjct: 120 SAEYCRPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSED 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLW 207
VL+PEQ RILKL + +M++F+V LL +W
Sbjct: 180 VLSPEQCRILKLFQIEMSEFRVGLLAVW 207
>gi|159476968|ref|XP_001696583.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282808|gb|EDP08560.1| predicted protein [Chlamydomonas reinhardtii]
Length = 223
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 133/218 (61%), Gaps = 6/218 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V+L+K KK + K+ L +++ ++++ Y ++VF NMRN K +R D
Sbjct: 1 MPKSKRNKVVSLTKVKKKDRQWKEGLLEKIRQSLDTYPTVYVFKYYNMRNESFKQLREDL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KDS RF G +M ALGKS+ DE + + + +KG GL FT + V F+ Y
Sbjct: 61 KDSSRFVLGSTALMQVALGKSEADEYKAGLSGLGEHIKGTVGLFFTKLPHEQVKEHFEAY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLP----EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
ED+A++G + D L EGPL PH++EPQLR+ GL T LNKGVV L KDHTV
Sbjct: 121 VHEDYARAGAKAAHDFSLTEGPLSGPMGPLPHTLEPQLRKFGLPTKLNKGVVELLKDHTV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKE 212
C++G L QA IL++ KMA+ K+ LL +W + +E
Sbjct: 181 CREGQKLDAAQAGILRVFDIKMAECKLKLLAVWRSGEE 218
>gi|134081799|emb|CAK42055.1| unnamed protein product [Aspergillus niger]
Length = 234
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 142/234 (60%), Gaps = 7/234 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + +EKY+++FVF V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTTKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E+E N+H ++ L G GLLFT+R V +F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLNPYLTGAVGLLFTSRDPQSVTDYFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTL-----FKDHT 174
DFA+SG +ST + G H+IEP+LR+LG+ T L KG V L +
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQDEPLSHTIEPELRKLGVPTRLVKGKVMLELTEGQEGFP 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDI 228
VC++G+VL Q +LK+ MA+F V L + ++ G E +L++++ M++
Sbjct: 181 VCREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVE-ILEKDEAGMEV 233
>gi|353244068|emb|CCA75525.1| related to protein involved in RNA turnover [Piriformospora indica
DSM 11827]
Length = 258
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 141/231 (61%), Gaps = 18/231 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+KT KKG +K+ L E+ + ++K+ +++F V +MRN+ LKD+R DW
Sbjct: 1 MPKSKRAKVVSLTKTEKKGRAKKEALVQEIQENLDKWRYLWLFEVGHMRNAHLKDIRADW 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K++ R FFG+ VMA ALG S E E + +S+ LKGQ GL FT+ + L +F
Sbjct: 61 KETGRMFFGRVSVMALALGTSPEREHMPGLSKLSNHLKGQVGLFFTSWDVSETLDYFHSI 120
Query: 120 EDEDFAKSGFISTEDVELKEG-PLPE----------------FPHSIEPQLRQLGLQTNL 162
+FA++G ++T+ + G PL FP ++EPQLR+LGL T L
Sbjct: 121 RRPEFARAGCVATQTFIIPSGGPLSPILSQEDKAAGIERSTPFPSAMEPQLRKLGLSTRL 180
Query: 163 NKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
KG + + + TVCK GD LT EQA+ILKL+ KM+ F+V L ++K+ G
Sbjct: 181 EKGSIMMAAEQTVCKAGDKLTSEQAQILKLMGVKMSVFRVGLRWLWDKETG 231
>gi|169625499|ref|XP_001806153.1| hypothetical protein SNOG_16023 [Phaeosphaeria nodorum SN15]
gi|160705666|gb|EAT76602.2| hypothetical protein SNOG_16023 [Phaeosphaeria nodorum SN15]
Length = 268
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 134/221 (60%), Gaps = 12/221 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E Q L + +A + + +IFVF+V+NMRNS LK+VR +
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSQKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAAF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ L G GL FTNR +++ +F Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSKLTEYLAGNVGLFFTNRDPSEIIEYFGAYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G +++ V + G +PE PHS+E +R+ G+ T L+KG +
Sbjct: 121 QTDFARAGVTASQTFTIPAGVVHSRGGEIPEEEDVALPHSVETTIRKWGMPTRLDKGKIM 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L +TVC +G+ + + +LK+ MA+FK+ L +Y+
Sbjct: 181 LDAPYTVCTEGETMNSHKTALLKMFGVAMAEFKIDLKAYYS 221
>gi|401420668|ref|XP_003874823.1| putative 60S acidic ribosomal protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491059|emb|CBZ26324.1| putative 60S acidic ribosomal protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 227
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND- 59
MPKSKR K V L+KT K E K L + + +A+E Y++++ F + N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKNKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR F G NK+M A+G+ + ++N+H +S L G CGLLFTN SK +V +F
Sbjct: 61 AGDSRIFLGNNKIMMIAIGRDEASAQKQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+A++G +TE + LK GPLP+FPHS+ L +LGL L++GV+ L +D TVC+ G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++LKL + A+FK+ L W N
Sbjct: 181 DTLSAEAAQLLKLFGVQSAEFKIDLTAHWAN 211
>gi|189199998|ref|XP_001936336.1| mRNA turnover protein MRT4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983435|gb|EDU48923.1| mRNA turnover protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 235
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 135/222 (60%), Gaps = 12/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E L + +A + Y ++FVF+V+NMRNS LKDVR ++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNYEHVFVFAVENMRNSYLKDVRAEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ L G GLLFT+R +++ +F Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSELTKHLNGNVGLLFTSRDPSEIIDYFSAYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T+ V + G +PE PHS+E +R+ G+ T L +G +
Sbjct: 121 KTDFARAGVVATQTFTVPAGVVHSRGGEVPEDEDVPLPHSMETTIRKWGMPTRLQQGKIV 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
L +T+ ++G V+ Q +LK+ MA FK+ L +Y+K
Sbjct: 181 LDAPYTIAEEGKVMNSHQTALLKMFGVAMADFKIDLKAYYSK 222
>gi|146104563|ref|XP_001469862.1| putative 60S acidic ribosomal protein [Leishmania infantum JPCM5]
gi|398024882|ref|XP_003865602.1| 60S acidic ribosomal protein, putative [Leishmania donovani]
gi|134074232|emb|CAM72976.1| putative 60S acidic ribosomal protein [Leishmania infantum JPCM5]
gi|322503839|emb|CBZ38925.1| 60S acidic ribosomal protein, putative [Leishmania donovani]
Length = 227
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND- 59
MPKSKR K V L+KT K E K L + + +A+E Y++++ F + N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTQAKTREDKDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREER 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR F G NK+M A+G+ +E + N+H +S L G CGLLFTN SK +V +F
Sbjct: 61 AGDSRIFLGNNKIMMIAIGRDEESAQKPNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+A++G +TE + LK GPLP+FPHS+ L +LGL L++GV+ L +D TVC+ G
Sbjct: 121 GAPVYARTGQTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++LKL + A+FK+ L W N
Sbjct: 181 DTLSAEAAQLLKLFGVQSAEFKMDLTAHWTN 211
>gi|358374137|dbj|GAA90731.1| 60S acidic ribosomal protein P0 [Aspergillus kawachii IFO 4308]
Length = 246
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 146/246 (59%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKTVKK E+ + L + + +EKY+++FVF V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTVKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E+E N+H +S L G GLLFT+R V +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLSPYLTGAVGLLFTSRDPQSVTDYFDNF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA+SG +ST + G + E P H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQVYSRAGEIPASEDEPLSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + +C++G+VL Q +LK+ MA+F V L + ++ G E +L+++
Sbjct: 181 MLELTEGQEGFPICREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVE-ILEKD 239
Query: 223 KTPMDI 228
+ M++
Sbjct: 240 EAGMEV 245
>gi|340504164|gb|EGR30639.1| hypothetical protein IMG5_127430 [Ichthyophthirius multifiliis]
Length = 253
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 149/252 (59%), Gaps = 34/252 (13%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K ++L+KT K + KQ + +L + +EKY+NIF+FS QNM + ++ +W
Sbjct: 1 MPKSKRNKVISLTKTKKNPIGHKQKISSKLNECIEKYDNIFLFSHQNMTTIPFRQIQQEW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM------ 114
DS+FF GKNKVM LG+ Q++E ++N+H +S +KG CGLLFT++S ++V
Sbjct: 61 NDSKFFLGKNKVMQVILGRDQQNEQKENLHKLSQQIKGDCGLLFTSKSLNEVQQQKLYNT 120
Query: 115 --------WFDVYEDEDFAKSGFISTEDVELKEGP--LPEFPHSIEPQLRQLGLQTNLNK 164
+F+ YE ++AK+G I+ E + L++ F HS++ LRQLG+ LNK
Sbjct: 121 QILIQISRYFNEYECLEYAKAGTIADETIILQKDSDVFKTFSHSMDNYLRQLGIDVMLNK 180
Query: 165 GVVTLFKDHTVCKKGDVLTPEQARIL------------------KLLKKKMAKFKVLLYL 206
G + + D +C+KG + EQA+IL KLLK+K A+FK++L
Sbjct: 181 GELQIQTDFILCQKGKAINTEQAKILVKNQNIYKTIIYLLKQNQKLLKQKKAQFKIILKC 240
Query: 207 WYNKKEGTFENL 218
+Y+K + F L
Sbjct: 241 YYHKPKLAFIQL 252
>gi|303289365|ref|XP_003063970.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454286|gb|EEH51592.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 291
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 147/223 (65%), Gaps = 9/223 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+RDK + L++T KKG E K L D + +A+++Y++++ F +N+RN+ K++++D
Sbjct: 1 MPKSRRDKVIALTQTKKKGREWKSGLIDTVREALDEYDSVYAFRTENLRNNTFKELKSDL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+S RFF G NKV+ ALGK EDE + +H +S+ ++G G++ TN K+D+ + Y
Sbjct: 61 AESSRFFMGSNKVLQVALGKGPEDEQREGLHQLSAHVRGHAGIVMTNLRKEDLEKALEKY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL--PE---FPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+ D+A++G ++ E + ++EGP+ P H++EP LR+ G+ T LN+GV+ L DH
Sbjct: 121 KVSDYARTGSLAPETIVIEEGPVHGPHGGLMEHTMEPTLRKNGMPTKLNRGVIELLADHV 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFE 216
VC++G+ ++P+ A +L+L ++A F + LL W ++ G FE
Sbjct: 181 VCREGEHVSPQAAILLRLFGHELATFSIDLLCGW--REGGEFE 221
>gi|70997105|ref|XP_753307.1| 60S acidic ribosomal protein P0 [Aspergillus fumigatus Af293]
gi|66850943|gb|EAL91269.1| 60S acidic ribosomal protein P0, putative [Aspergillus fumigatus
Af293]
gi|159126967|gb|EDP52083.1| 60S acidic ribosomal protein P0, putative [Aspergillus fumigatus
A1163]
Length = 247
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 136/231 (58%), Gaps = 18/231 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SK KK E+ + L + + VEKY+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVEKYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E+E N+H +S L G GLLFT+R + VL +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLSPYLTGAVGLLFTSRDPESVLSYFDAF 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +ST + G P E H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRGGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK+G+VL Q +LK+ A+FKV L + + G
Sbjct: 181 MLELTDGQEGYPVCKEGEVLDSRQTTLLKMFGVATAEFKVDLKAQWTRSTG 231
>gi|328871640|gb|EGG20010.1| ribosomal protein L10 family protein [Dictyostelium fasciculatum]
Length = 228
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 147/236 (62%), Gaps = 9/236 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +SKR K V+L+ VK E+K+ L + + +++Y +I+V S N RNS LK R DW
Sbjct: 1 MARSKRSKVVSLTTVVKNPGEKKKRLVANVRELIDEYKSIYVVSFDNARNSHLKQARTDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+F +GK +V+A LG++ E+E+ N+ V+ L G+C L FTN SKD V+ +F+ ++
Sbjct: 61 PASKFLYGKKQVLAVGLGRTLEEELRPNLSKVTKYLSGECALFFTNDSKDTVMTYFENFK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+ED A++GF+ E V + G + + HS EP LR+LG+ T L G+++L D +C++G
Sbjct: 121 EEDHARAGFVPKETVVIPAGTI-DMLHSQEPYLRKLGMPTLLKAGIISLESDFNLCEEGI 179
Query: 181 VLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+TP+QA++++L KK+++F ++ +W + FE + P DMEDDE
Sbjct: 180 PVTPDQAKLMQLFDKKISEFSFRVVGVW---SDDAFEAFAE----PSQDGDMEDDE 228
>gi|358056987|dbj|GAA97118.1| hypothetical protein E5Q_03793 [Mixia osmundae IAM 14324]
Length = 230
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 138/219 (63%), Gaps = 5/219 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+ + L+KT KK E+K L +E+ A++ + +++F V + RN ++++R W
Sbjct: 1 MPKSKRNTVLDLTKTKKKTREQKGALIEEIQLALDTFQFVWIFQVNHTRNQYIQEIRAAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ F G+N +M ALG + EDE + + L+G GLLFT+ + +V+ +F+ Y+
Sbjct: 61 KPSKIFMGRNGLMRKALGATAEDEHARGSAHIGQMLEGNVGLLFTDCTPKEVVEYFESYK 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH-TV 175
DFA++G ++TE +EL +GP+ PHSIEPQLR+ G+ T+L +GV TL TV
Sbjct: 121 KSDFARTGNLATETIELPQGPVLMEGEPAPHSIEPQLRKAGMPTSLIRGVPTLAGGGFTV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
CK G L+PEQ ++LKL K MA F+++ + K G+
Sbjct: 181 CKAGQTLSPEQVQLLKLFNKPMATFQIVPLKGLDVKAGS 219
>gi|168066014|ref|XP_001784939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663486|gb|EDQ50247.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 142/213 (66%), Gaps = 1/213 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K VTLSKT KKG E+K++L + +++Y ++++FS NMRN+K K+ +
Sbjct: 1 MPKSKRNKLVTLSKTKKKGKEQKESLVKSVRDCLDEYASLYIFSFVNMRNTKFKEFKEKL 60
Query: 61 -KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
SRFF G NKV+ ALGK+ +E ++ +H S + G CGL FTN K +VL F +
Sbjct: 61 KASSRFFLGGNKVLQIALGKTAAEEHKEGLHQASEQIHGFCGLFFTNLPKFEVLREFREF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E+ DFA++G I+TE V+LKEGPL +F H +EP LR+ G+ LN+GV+ L D+ VC +G
Sbjct: 121 EELDFARTGSIATETVDLKEGPLDQFTHDMEPFLRKQGMPVRLNRGVIELVADYNVCTEG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
++PE +RIL+LL +MA FK+ L + E
Sbjct: 181 QNISPEASRILRLLGVQMAAFKMHLRCRWTPDE 213
>gi|345570967|gb|EGX53782.1| hypothetical protein AOL_s00004g441 [Arthrobotrys oligospora ATCC
24927]
Length = 238
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 140/222 (63%), Gaps = 14/222 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K ++L+KT KKG E + D + A+++++ ++VFSV +MRN++LK+VR ++
Sbjct: 1 MPKSKRNKLISLTKTQKKGRENNVRIFDAIRAALDEHSFVWVFSVASMRNAQLKEVRAEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DSR FFGK KVM ALG ++EDE N+ +S + G+ GLL TNR+ + V +FD +
Sbjct: 61 QDSRIFFGKTKVMIKALGTTREDEYRDNLSKLSKHMNGEVGLLLTNRTPEAVTEFFDSFS 120
Query: 121 DEDFAKSGFISTEDVELKEGP-------------LPEFPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +S + G LP HS+E +R LG+ T L G V
Sbjct: 121 AMDFARAGAVSPLTFTVPAGTVYSRGGEIAEEDDLP-LAHSLETTVRGLGMPTRLVNGKV 179
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
TL +++TVCK+GDVL +Q R+LKL ++FKV L +++
Sbjct: 180 TLNEEYTVCKEGDVLNSQQTRLLKLFGVVTSEFKVKLSAYWS 221
>gi|451851636|gb|EMD64934.1| hypothetical protein COCSADRAFT_88975 [Cochliobolus sativus ND90Pr]
Length = 235
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 12/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E L + +A + + +IFVF+V+NMRNS LK+VR ++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ L G GLLFTNR +++ +F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSQLTEHLNGNVGLLFTNREPSEIIEYFANYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T+ V + G LPE PHS+E +R+ G+ T L+KG +
Sbjct: 121 QTDFARAGVVATQTFTVPAGIVYSRGGELPEEDDVPLPHSMETTIRKWGMPTRLDKGKII 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
L +T+ ++G + Q +LKL MA FK+ L +Y+K
Sbjct: 181 LDAPYTIAEEGKPMNSHQTALLKLFGVAMADFKIDLKAYYSK 222
>gi|451995576|gb|EMD88044.1| hypothetical protein COCHEDRAFT_1143898 [Cochliobolus
heterostrophus C5]
Length = 235
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 135/222 (60%), Gaps = 12/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E L + +A + + +IFVF+V+NMRNS LK+VR ++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNFEHIFVFAVENMRNSYLKEVRAEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ L G GLLFTNR +++ +F Y
Sbjct: 61 ADSRFFFGKTKVMAKALGQTPAEEHLTNLSQLTEHLNGNVGLLFTNREPSEIIEYFANYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T+ V + G LPE PHS+E +R+ G+ T L+KG +
Sbjct: 121 QTDFARAGVVATQTFTVPAGVVYSRGGELPEEDDVPLPHSMETTIRKWGMPTRLDKGKII 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
L +T+ ++G + Q +LKL MA FK+ L +Y+K
Sbjct: 181 LDAPYTIAEEGKPMNSHQTALLKLFGVAMADFKIDLKAYYSK 222
>gi|406866558|gb|EKD19598.1| hypothetical protein MBM_02835 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 235
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 129/221 (58%), Gaps = 12/221 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V LS+ KKG E L + + +++Y + FVF V NMRN+ LK VRND+
Sbjct: 1 MPKSKRAKVVHLSQVQKKGKELTLKLFANVRECLDEYQHCFVFRVDNMRNTYLKAVRNDF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+DSR FFGK KVMA ALG + EDE + + H++S L G GLLFTNR V +F
Sbjct: 61 QDSRLFFGKTKVMAKALGSTPEDEYQPSTHLLSKYLTGNVGLLFTNREPSAVKEYFSQMA 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE------------FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G +T E+ G + HS+EP+LR+L + T+L KG +T
Sbjct: 121 KTDFARAGTTATRSFEIPAGVVYSMGGEIDQEQDVPMAHSLEPELRKLNVPTSLTKGKIT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L + VCK+G VL Q R+LKL ++F V L +++
Sbjct: 181 LENPYLVCKEGHVLDSRQTRLLKLFGVATSEFTVQLVAYWS 221
>gi|300123866|emb|CBK25137.2| unnamed protein product [Blastocystis hominis]
Length = 215
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 1/200 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR V+L++T +KG E K N+ + + + V+ Y ++V N+R + KD+R
Sbjct: 1 MPRSKRAHVVSLTQTKQKGKEHKDNVVNTVRECVDNYKFVYVLEFDNLRTNAFKDLRLQL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D RF GKN+VM ALG+S E+E N+ + L G C L FTNR +++VL +F Y+
Sbjct: 61 NDCRFLLGKNRVMQVALGRSPEEEYRDNLSKLGEYLGGNCTLFFTNRPQEEVLSFFKEYK 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
D+A++GF +TE+ + +G +P F HS+ + R+L L + G + + +D+TVCKKG
Sbjct: 121 SLDYARAGFKATEEFVIPKGEMP-FAHSMMEEFRKLRLPVEMKNGTIHMREDYTVCKKGK 179
Query: 181 VLTPEQARILKLLKKKMAKF 200
VLTPEQ RILKL K MA F
Sbjct: 180 VLTPEQCRILKLYSKPMAYF 199
>gi|146184766|ref|XP_001030087.2| hypothetical protein TTHERM_01151550 [Tetrahymena thermophila]
gi|146142757|gb|EAR82424.2| hypothetical protein TTHERM_01151550 [Tetrahymena thermophila
SB210]
Length = 232
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 140/231 (60%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+K K KQ ++++L + V+KY+NI+VFS +NM ++++ W
Sbjct: 1 MPKSKRSKVVALTKVKKDATGHKQKIQNKLNECVQKYDNIYVFSHENMTTIPFREIQAQW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDV-------- 112
DSRFF GKNKVM LGK + E N+H ++ +KG CGLLFTN++ ++V
Sbjct: 61 SDSRFFLGKNKVMQIVLGKDSDSEQLDNLHYLTEQIKGDCGLLFTNKTYEEVKKQLTFFI 120
Query: 113 ---LMWFDVYEDEDFAKSGFISTEDVELKEGP--LPEFPHSIEPQLRQLGLQTNLNKGVV 167
+FD Y E+FAK+G ++ E + L++ F H+++ LR+LG+ L G++
Sbjct: 121 YELSSFFDSYGCEEFAKAGHVANETIILQKDSDVFNTFAHTMDVYLRKLGVDVILQNGIL 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L + +C++G + EQA++LKLL K+A+FK+ L Y+K TF+ L
Sbjct: 181 NLQSNFVLCQEGKPINTEQAKLLKLLGYKIAQFKIELKCCYHKPSTTFKKL 231
>gi|255084587|ref|XP_002508868.1| predicted protein [Micromonas sp. RCC299]
gi|226524145|gb|ACO70126.1| predicted protein [Micromonas sp. RCC299]
Length = 261
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 139/214 (64%), Gaps = 7/214 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+RDK + L++T KK E K L +++ +A+E+Y ++FVF N+RN+ K+++
Sbjct: 1 MPKSRRDKVIALTQTKKKDREWKGGLIEQIREALEQYQSVFVFRCANLRNNAFKELKATL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DS RFF G NKVM ALGK EDE +H ++ ++G G++FTN +K+DV Y
Sbjct: 61 ADSSRFFMGSNKVMQVALGKGPEDEQRDGLHQLAEHVRGHAGVVFTNLTKEDVESAMAKY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL--PE---FPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
E D+A++G ++ E + +++GP+ P H++EP LR+ G+ T LN+GV+ L DH
Sbjct: 121 EVSDYARTGTVARETIVVEKGPVHGPHGGLMEHTMEPTLRKNGMPTKLNRGVIELLADHA 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
+CK+G+ ++P+ A +L+L ++A FK+ LL W
Sbjct: 181 LCKEGEHISPQGAILLRLFGHELATFKMDLLCGW 214
>gi|281208480|gb|EFA82656.1| ribosomal protein L10 family protein [Polysphondylium pallidum
PN500]
Length = 232
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 147/239 (61%), Gaps = 11/239 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +SKR K V+L+K K ++K L + + VE+Y++I++ S N+RN+ LK R DW
Sbjct: 1 MVQSKRSKAVSLTKVTKNPNQKKSKLISTVRECVEEYSDIYLISFDNVRNNHLKQARADW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALK--GQCGLLFTNRSKDDVLMWFDV 118
+SRF FGK KV++ LG++ DE + + +S L+ G+C L FTN KD VL
Sbjct: 61 SNSRFLFGKKKVLSIGLGRADSDEQKPGLSKLSQNLQSSGECCLFFTNDPKDTVL----- 115
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
+ DFA++GF E + LK+GP+ + H+ EP LR+LG+ T+L GV+ L +D+ +C+K
Sbjct: 116 -SEVDFARAGFEPEETITLKQGPI-DMTHTQEPYLRRLGMPTSLKNGVIILERDYDLCEK 173
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE--GTFENLLDREKTPMDIYDMEDDE 235
G VLTP+QAR+L+L K+++FK +L ++ E E D + M+ D EDDE
Sbjct: 174 GTVLTPDQARLLQLFDHKISEFKFILLGYWKDAEYYALQEPSADVKSEDMNEDDSEDDE 232
>gi|294879220|ref|XP_002768606.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
gi|239871277|gb|EER01324.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
Length = 221
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 3/213 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ V L+K K+ E+K +E+ K +EK+ +V ++N RN LK +RND
Sbjct: 1 MPKSKRNQVVNLTKVSKRQTREKKDRAIEEIRKCLEKFRYAYVLKLENQRNKLLKGLRND 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K R F G+NKVM ALG E E ++ IH +S + G+ GLL T+ + D ++ +
Sbjct: 61 LKPGRLFCGRNKVMQVALGVDPESECQEGIHALSERISGEVGLLLTDMTADQLMDILANH 120
Query: 120 EDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
E +FA+SG IST D+ L+ G L FPHS EP LR+LGL T L G + L D+ VCK
Sbjct: 121 EQSNFARSGCISTGDITLEAGDDALSRFPHSQEPFLRKLGLPTLLVNGKIRLMGDYEVCK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
G LTPEQ +++KLL MA F+V + ++K
Sbjct: 181 TGKALTPEQCQLVKLLGIPMAVFRVSIAAQWSK 213
>gi|164658856|ref|XP_001730553.1| hypothetical protein MGL_2349 [Malassezia globosa CBS 7966]
gi|159104449|gb|EDP43339.1| hypothetical protein MGL_2349 [Malassezia globosa CBS 7966]
Length = 306
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 137/216 (63%), Gaps = 7/216 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M ++KR K V+L+KT K E K+N + + +A +Y I++F+V NMRN+ L +VR W
Sbjct: 1 MARTKRAKVVSLTKTKAKTRENKENFVENVREAANQYAYIWIFAVSNMRNAYLGEVRRLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ FFGK +V+A ALG++ E+EI + VS L+G GLL T+ +VL W + Y
Sbjct: 61 TGSKIFFGKLRVIAKALGETTEEEIRPGLGQVSQRLRGNVGLLMTDSPPAEVLDWCNDYR 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
+FA+ G +TE + L GP+ PE PH++EPQLR LG+ T L +G TL ++
Sbjct: 121 RIEFARMGNRATETIILPPGPIYCRSNPPETLPHNLEPQLRALGMPTQLKRGEPTLLEEF 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
TVC+KG+ L+ E+A+ILK L +MA F+++ +++
Sbjct: 181 TVCRKGEKLSAEKAQILKHLFVQMAHFRLIPLAYWS 216
>gi|119478258|ref|XP_001259340.1| mRNA turnover protein MRT4 [Neosartorya fischeri NRRL 181]
gi|119407494|gb|EAW17443.1| 60S acidic ribosomal protein P0, putative [Neosartorya fischeri
NRRL 181]
Length = 247
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 134/231 (58%), Gaps = 18/231 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SK KK E+ + L + + VE Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVENYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E E N+H +S L G GLLFT+R + VL +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPETEAAPNLHKLSPYLTGAVGLLFTSRDAESVLSYFDAF 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +ST + G P E H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRGGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK+G+VL Q +LK+ A+FKV L + + G
Sbjct: 181 MLELTDGQEGYPVCKEGEVLDSRQTTLLKMFGVATAEFKVDLKAQWTRSTG 231
>gi|317034762|ref|XP_001401117.2| mRNA turnover protein MRT4 [Aspergillus niger CBS 513.88]
gi|350639552|gb|EHA27906.1| hypothetical protein ASPNIDRAFT_53863 [Aspergillus niger ATCC 1015]
Length = 246
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 145/246 (58%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + +EKY+++FVF V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTTKKSHKEQTRRLYANIRECIEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E+E N+H ++ L G GLLFT+R V +F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPENEAAPNLHKLNPYLTGAVGLLFTSRDPQSVTDYFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLRQLGLQTNLNKGVV 167
DFA+SG +ST + G P+ E H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARSGTVSTRAFSIPNGQVYSRAGEIPVSEDEPLSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + VC++G+VL Q +LK+ MA+F V L + ++ G E +L+++
Sbjct: 181 MLELTEGQEGFPVCREGEVLDSRQTTLLKMFGVVMAEFHVALKAHWTRESGEVE-ILEKD 239
Query: 223 KTPMDI 228
+ M++
Sbjct: 240 EAGMEV 245
>gi|403161337|ref|XP_003321692.2| hypothetical protein PGTG_03229 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171226|gb|EFP77273.2| hypothetical protein PGTG_03229 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 235
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 131/225 (58%), Gaps = 10/225 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V LSKT KK E K L +++ +A E + +++F+V ++R + L+D+R+ W
Sbjct: 1 MPKSKRQTIVHLSKTSKKTKEVKAKLIEQIKEASENFQFVWLFTVDHVRTAYLQDIRSSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR F G+N VM LG +EDE + + L+G GLLFTN V+ WFD Y
Sbjct: 61 KPSRIFMGRNAVMRLGLGSKEEDEHMPGLGAIGKLLEGDTGLLFTNEPPKVVVEWFDDYV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL--------PEFPH-SIEPQLRQLGLQTNLNKGVVTLFK 171
D+A+ G ++TE VEL GP+ P ++EP LR LGL T L + TL
Sbjct: 121 KADYARKGNLATETVELPAGPVMIKEINDEPSVAAGALEPHLRALGLPTTLQSRIPTLSS 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTF 215
H VCK+G+ L QA +LK L +MA+FK++L ++W + TF
Sbjct: 181 PHVVCKEGEKLDTNQAGLLKTLGYQMAQFKIVLSHVWIKDRSTTF 225
>gi|313232101|emb|CBY09212.1| unnamed protein product [Oikopleura dioica]
Length = 278
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 140/216 (64%), Gaps = 3/216 (1%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKS+RDK +L++T K+ GLE K+ + ++ V Y IF++S++N RN+KLKD+R +
Sbjct: 1 MPKSRRDKTYSLTQTKKQVGLEHKEKVVSQIQDFVNSYERIFIYSLENSRNNKLKDLRAE 60
Query: 60 WKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
+KD SRF+ GKNK+ A GKS+E E + +H S +L G+ GLLFTN+ +++V+ +F+
Sbjct: 61 FKDDSRFYLGKNKLCQVAFGKSKELEAAEGLHKFSQSLAGETGLLFTNKKEEEVVEYFNK 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ-LGLQTNLNKGVVTLFKDHTVCK 177
Y +A+ G S V++ GPLP+F +IE LR+ L L T L GVVTL +D + K
Sbjct: 121 YNSASYARVGEKSEVTVKVVAGPLPQFSFAIEGHLRERLKLPTALKDGVVTLMQDFFLAK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
G+ +T +Q+R+LKL + F V L +NK+ G
Sbjct: 181 DGEAITAQQSRLLKLFGCAITTFNVKLTKMWNKESG 216
>gi|330918412|ref|XP_003298213.1| mRNA turnover protein MRT4 [Pyrenophora teres f. teres 0-1]
gi|311328725|gb|EFQ93690.1| hypothetical protein PTT_08845 [Pyrenophora teres f. teres 0-1]
Length = 235
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 133/222 (59%), Gaps = 12/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT KKG E L + +A + + ++FVF+V+NMRNS LKDVR ++
Sbjct: 1 MPKSKRAKVVHLTKTDKKGKELSLKLFANVQEAADNHEHVFVFAVENMRNSYLKDVRAEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSRFFFGK KVMA ALG++ +E N+ ++ + G GLLFT+R +++ +F Y
Sbjct: 61 SDSRFFFGKTKVMAKALGQTPAEEHLTNLSELTKHVNGNVGLLFTSRDPSEIIDYFSAYS 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T+ V + G +PE PHS+E +R+ G+ T L +G +
Sbjct: 121 KTDFARAGVVATQTFTVPAGVVHSRGGEVPEDEDVPLPHSMETTIRKWGMPTRLQQGKIV 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
L +T+ ++G L Q +LK+ MA FK+ L +Y K
Sbjct: 181 LDAPYTIAEEGKALNSHQTALLKMFGVAMADFKIDLKAYYTK 222
>gi|67541464|ref|XP_664506.1| hypothetical protein AN6902.2 [Aspergillus nidulans FGSC A4]
gi|40739111|gb|EAA58301.1| hypothetical protein AN6902.2 [Aspergillus nidulans FGSC A4]
gi|259480503|tpe|CBF71694.1| TPA: 60S acidic ribosomal protein P0, putative (AFU_orthologue;
AFUA_5G13470) [Aspergillus nidulans FGSC A4]
Length = 246
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 145/246 (58%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + VEKY+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPRSKRARIVHESKTAKKSHKEQTRRLYANIRECVEKYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E E +N+H+++ L G GLLFT+R V +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPETEAAENLHLLTPYLTGAVGLLFTSRDPASVTDYFDAF 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +T + G P E H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARAGTEATRSFSIPAGLVYSRAGEIPTSEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + + VCKKG++L Q +LK+ + ++F+V L + + G E +L++
Sbjct: 181 MLELTDGQEGYPVCKKGEILDSRQTTLLKMFGVQTSEFRVGLKAHWARATGKVE-ILEKN 239
Query: 223 KTPMDI 228
+ M++
Sbjct: 240 ENEMEV 245
>gi|402078982|gb|EJT74247.1| mRNA turnover protein 4 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 251
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 19/228 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+ KK E+K+ L + + V +Y + FVFSV NMRN++LKD+R D
Sbjct: 1 MPKSKRSKVVHLTSVTKKTREQKEQLFGNIRQCVPEYQHCFVFSVDNMRNNQLKDLRRDM 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+MA ALG++ EDE IH ++ L G GL+FTNR DVL
Sbjct: 61 ADSRMFFGKTKLMARALGQTPEDEQADGIHGLARHLTGTVGLIFTNRDPSDVLSTLQSVS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + G + E P HSIEP+LR+LG+ T L KG V
Sbjct: 121 AIDFARAGAVAPRGFRVPPGVVYSTGGEVPAEDDVPMAHSIEPELRKLGVPTRLVKGKVV 180
Query: 169 LFKD-------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L + + VC++GDVL Q R+LKL +++F+V + +++
Sbjct: 181 LGAEDGSGSEGYVVCREGDVLDGRQTRLLKLFSVCLSEFRVRVLAYWS 228
>gi|154346340|ref|XP_001569107.1| putative 60S acidic ribosomal protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066449|emb|CAM44242.1| putative 60S acidic ribosomal protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 227
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND- 59
MPKSKR K V+L+KT K K L + + +A+E Y +++ F + N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVSLTKTQAKTRADKDKLIERIRQALEDYTDVYTFQLHNIRTNILQLIREER 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+DSR F G NK+M A+G+ ++ ++N+H +S L G CGL FTN SK +V +F
Sbjct: 61 AEDSRIFLGNNKLMMIAIGRDEKSAQKENLHKLSPFLTGLCGLFFTNLSKKEVKEYFATV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+A++G +TE + LK GPLP+FPHS+ L +LGL L++GV+ L +D TVC+ G
Sbjct: 121 GAPVYARTGQTATESLLLKAGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTVCEPG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++LKL + A+FK+ L W N
Sbjct: 181 DTLSAEAAQLLKLFGVECAEFKIDLTAHWTN 211
>gi|46124655|ref|XP_386881.1| hypothetical protein FG06705.1 [Gibberella zeae PH-1]
gi|408398953|gb|EKJ78078.1| hypothetical protein FPSE_01539 [Fusarium pseudograminearum CS3096]
Length = 244
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 133/227 (58%), Gaps = 18/227 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R K V L++ KK E K L + V +Y N FVFSV NMRN+ LKDVR +
Sbjct: 1 MPKSRRAKVVHLTQVDKKTRENKDKLFQNIRDTVPEYQNCFVFSVDNMRNNHLKDVRREL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG++ E+ I I +S G GL+ TNR +++L +F+
Sbjct: 61 SDCRVFFGKTKLMAKALGQTPEEAIAPGIEHLSKYFTGTVGLILTNRPAEEILTYFENLA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T D + G + E P H+IEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGAVATRDFSIPTGVVYATAGEVPAEHDVPLAHTIEPELRRLGVPTRMVKGRVV 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L +++TVCK+GDVL Q R+LKL M++FKV + ++N
Sbjct: 181 LGDESGQGEEYTVCKEGDVLDSRQTRLLKLFDMCMSEFKVKVLAYWN 227
>gi|76156443|gb|AAX27652.2| SJCHGC01801 protein [Schistosoma japonicum]
Length = 236
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 6 RDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF 65
RDKKV L+K K ++KQ++ ++ + +++Y ++V ++ N R K+ ++R + D +
Sbjct: 1 RDKKVELTKVQKHAPKKKQDV-AKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL 59
Query: 66 FFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFA 125
FG NKV +ALGK+ +D +H + LKGQC LLFT S ++ D + ++
Sbjct: 60 LFGINKVTVWALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYC 119
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
+ G + + V + GPLP+FPH++EP LRQLG+ L +GVV L +D+ VC DVL+PE
Sbjct: 120 RPGAPAEQTVRIASGPLPKFPHTMEPVLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPE 179
Query: 186 QARILKLLKKKMAKFKV-LLYLW 207
Q RILKL + +M++F+V LL +W
Sbjct: 180 QCRILKLFQIEMSEFRVGLLAVW 202
>gi|389632569|ref|XP_003713937.1| mRNA turnover protein 4 [Magnaporthe oryzae 70-15]
gi|291195842|gb|ADD84637.1| unknown [Magnaporthe oryzae]
gi|351646270|gb|EHA54130.1| mRNA turnover protein 4 [Magnaporthe oryzae 70-15]
gi|440473214|gb|ELQ42029.1| mRNA turnover protein 4 [Magnaporthe oryzae Y34]
gi|440480245|gb|ELQ60920.1| mRNA turnover protein 4 [Magnaporthe oryzae P131]
Length = 251
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 137/233 (58%), Gaps = 20/233 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V ++ KK E+K+ L + + V +Y ++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVVHMTNVAKKTREQKELLFTNIRECVPQYQHLFVFSVDNMRNNNLKDVRREL 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR FFGK K+MA ALG++ EDE + +H ++S L G GL+FTNR ++L + D
Sbjct: 61 SGDSRMFFGKTKLMARALGQTAEDEQAEGLHKLTSHLAGTVGLIFTNRPASELLSYLDSI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ D + G + E P HSIEP+LR+LG+ T L KG V
Sbjct: 121 TSVDFARAGAVAPRDFSIPPGVVYSTGGEVPQEYDVPLAHSIEPELRKLGVPTRLIKGRV 180
Query: 168 TLFKD-------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VC++GDVL Q R+LKL ++FK+ + +++ G
Sbjct: 181 VLGGENGEGSTGYDVCREGDVLDSRQTRLLKLFSVCFSEFKIQVLAYWSAATG 233
>gi|115399500|ref|XP_001215339.1| mRNA turnover protein MRT4 [Aspergillus terreus NIH2624]
gi|114192222|gb|EAU33922.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 249
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 136/233 (58%), Gaps = 20/233 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + VEKY ++FVF V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTAKKSHKEQTRRLYANIRECVEKYEHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 WKDSR--FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFD 117
+ DSR FFGK KVMA ALG + E E N+H +S L G GLLFT+R + VL +FD
Sbjct: 61 FADSRGRLFFGKTKVMAVALGHNPESEAAPNLHKLSPLLSGAVGLLFTSRDPESVLSYFD 120
Query: 118 VYEDEDFAKSGFISTEDVEL-------KEGPLP-----EFPHSIEPQLRQLGLQTNLNKG 165
+ DFA++G +ST + + G +P H+IEP+LR+LG+ T L KG
Sbjct: 121 TFRPLDFARAGTVSTRSFTIPNGLVYSRAGEIPTADDEPISHTIEPELRKLGVPTRLVKG 180
Query: 166 VVTL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
V L + + VC++G+VL Q +LK+ A+F+V L ++ + G
Sbjct: 181 KVMLELTDDQEGYPVCREGEVLDSRQTTLLKMFGVASAEFRVDLKAYWTRDTG 233
>gi|342885913|gb|EGU85865.1| hypothetical protein FOXB_03713 [Fusarium oxysporum Fo5176]
Length = 244
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 26/231 (11%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERK----QNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDV 56
MPKSKR K V L++ KK E K QN+RD V +Y N FVFSV NMRN+ LKDV
Sbjct: 1 MPKSKRAKVVHLTQVSKKTRENKDKLFQNIRD----TVPEYQNCFVFSVDNMRNNHLKDV 56
Query: 57 RNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
R + D R FFGK K+MA ALG++ E+ I I +S L G GL+ TNR +++L +F
Sbjct: 57 RRELSDCRLFFGKTKLMAKALGQTPEEAIAPGIEDLSRYLTGTVGLILTNRPVEEILSYF 116
Query: 117 DVYEDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNK 164
+ DFA++G ++T D + G + E P H+IEP+LR+LG+ T + K
Sbjct: 117 ENLAPVDFARAGAVATRDFSIPTGVVYATAGEVPAEHDVPLEHTIEPELRRLGVPTRMVK 176
Query: 165 GVVTL------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
G V L +++ VCK+GDVL Q R+LKL +++FKV + ++N
Sbjct: 177 GRVVLGDEAGQGEEYVVCKEGDVLDSRQTRLLKLFDVCLSEFKVKVLAYWN 227
>gi|225677480|gb|EEH15764.1| mRNA turnover protein [Paracoccidioides brasiliensis Pb03]
gi|226295398|gb|EEH50818.1| mRNA turnover protein [Paracoccidioides brasiliensis Pb18]
Length = 243
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 136/230 (59%), Gaps = 16/230 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SKT KK E+ + L + AV +Y++IF+FSV NMRN+ LKDVR +
Sbjct: 1 MPISKRARLVHESKTAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++ ++ L G GLLFT+RS VL +F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLNQLTPFLTGNVGLLFTSRSPQSVLQYFNSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++T + G + E P H+IEP LR+LG+ T L KG V
Sbjct: 121 HPTDFARAGTVTTRSFTIPSGIVYSQGGEVPADQDQPISHTIEPMLRKLGMPTRLVKGKV 180
Query: 168 TL---FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
L + + VCK G+ L Q +LK+ +A+F+V + +N+K+G+
Sbjct: 181 VLEVEGEGYQVCKAGETLDSRQTTLLKMFGVAVAEFRVEMKAQWNRKDGS 230
>gi|302916127|ref|XP_003051874.1| mRNA turnover protein MRT4 [Nectria haematococca mpVI 77-13-4]
gi|256732813|gb|EEU46161.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 242
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 130/226 (57%), Gaps = 19/226 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L++ KK E K L + + + +Y FVFSV NMRNS LK+VR +
Sbjct: 1 MPKSKRAKVVHLTQVSKKTRENKDKLFENIRNEIPEYQTCFVFSVDNMRNSYLKEVRREL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG++ E+ I I ++ L G GLL TNR +++L +FD
Sbjct: 61 SDCRLFFGKTKLMAKALGQTPEEAIAPGIEGITKHLAGTVGLLLTNRPAEEILAYFDNLA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ L G L E P H+IEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGVAASRGFSLPAGVLYATGGEVPAEHDVPLEHTIEPELRRLGVPTRMVKGRVV 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L +D+ VCK+GD+L Q R+LKL +++FKV +L W
Sbjct: 181 LGDESGEGEDYVVCKEGDILDSRQTRLLKLFSVCLSEFKVKVLAYW 226
>gi|156083206|ref|XP_001609087.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796337|gb|EDO05519.1| conserved hypothetical protein [Babesia bovis]
Length = 225
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 132/222 (59%), Gaps = 9/222 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNI-----FVFSVQNMRNSKLKD 55
MPKSKR K+V L+ K ERK NL D + ++E I +V ++ N RNS LK+
Sbjct: 1 MPKSKRSKEVKLTAVKKNAKERKVNLVDSIRTSIEAPEGIEERFVYVIALNNQRNSPLKE 60
Query: 56 VRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
+R K R F+GKNKVM ALG E+E+ N+H ++ + G+ LL +N + D V
Sbjct: 61 LRTILKPGRLFYGKNKVMQLALGAKPENELLDNLHKIAECISGERALLVSNEAPDVVRNK 120
Query: 116 FDVYEDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
+ Y+ DFAK+G ++TE + LK G L FP ++EPQ R LG+ T L G + L D+
Sbjct: 121 LESYKVNDFAKAGNVATETILLKPGDSTLEVFPGNMEPQFRHLGMPTTLKMGKIELLGDY 180
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTF 215
VC++G LTP QA++LK+L +MA F+ ++ +N GTF
Sbjct: 181 LVCEEGKPLTPTQAKVLKVLGIRMALFECTIHAHWN--NGTF 220
>gi|453087003|gb|EMF15044.1| mRNA turnover protein [Mycosphaerella populorum SO2202]
Length = 241
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ + S KK ER + L + AV++Y +IFVFSV+NMRN+ LKDVR
Sbjct: 1 MPKSKRNRIIHTSVVQKKPAKERSEALFSSIHAAVDEYAHIFVFSVENMRNTYLKDVRQH 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR F+GK KVMA ALG S EDE + ++ L G GLLFTNR+ ++VL +F+ +
Sbjct: 61 FADSRIFYGKTKVMAKALGSSVEDEHAPGLAKLTKYLAGNVGLLFTNRAPEEVLEFFEGF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVV 167
+ DFA++G ++T + G + + PHS+E +R+ G+ T L+KG V
Sbjct: 121 VEVDFARAGVVATRTFTVPAGIVYSRGGEVAVEDDVQLPHSLEVMVRKWGMPTRLDKGKV 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L +++TVC++G L Q +LK+ M++FKV + +++
Sbjct: 181 VLDQEYTVCQEGKQLNSHQTALLKMFGVAMSEFKVDVQAYWS 222
>gi|169779455|ref|XP_001824192.1| mRNA turnover protein MRT4 [Aspergillus oryzae RIB40]
gi|238500101|ref|XP_002381285.1| mRNA turnover protein MRT4 [Aspergillus flavus NRRL3357]
gi|83772931|dbj|BAE63059.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693038|gb|EED49384.1| 60S acidic ribosomal protein P0, putative [Aspergillus flavus
NRRL3357]
gi|391870377|gb|EIT79562.1| protein involved in mRNA turnover [Aspergillus oryzae 3.042]
Length = 247
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V +KT KK E+ + L + ++VEKY+++FVF V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHETKTAKKSHKEQTRRLYANIRESVEKYDHLFVFGVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E E N+H + L G GLLFT+R + V +F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGHNPESEAATNLHKLVPYLTGAVGLLFTSRDPESVTNYFETF 120
Query: 120 EDEDFAKSGFISTEDVEL-------KEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +ST + + G +P H+IEP+LR+LG+ T L KG V
Sbjct: 121 RPLDFARAGTVSTRSFSIPNGLVYSRAGEIPASEDEPVSHTIEPELRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + VC++G+VL Q +LK+ ++F V L + ++ G + +L++E
Sbjct: 181 MLELTGGQEAFPVCREGEVLDSRQTTLLKMFGVATSEFHVALKACWTRESGEVK-ILEKE 239
Query: 223 KTPMDI 228
+ M++
Sbjct: 240 QGGMEV 245
>gi|367049670|ref|XP_003655214.1| mRNA turnover protein MRT4 [Thielavia terrestris NRRL 8126]
gi|347002478|gb|AEO68878.1| hypothetical protein THITE_2118650 [Thielavia terrestris NRRL 8126]
Length = 275
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 134/239 (56%), Gaps = 21/239 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K L + + + KY + FVFSV NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVYHLTQVTKKTREQKDKLFANIRECIPKYQHCFVFSVDNMRNNYLKDVRQEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+ A ALG + E+ +H ++ L G GLLFTNR+ + V+ +F
Sbjct: 61 SDSRLFFGKTKLTARALGTTPEESQADGLHALTRYLSGAVGLLFTNRAPEAVISYFGSLA 120
Query: 121 DEDFAKSGFISTEDVELKEG----------PLPEFP--HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G +T V + G P + P H++EP+LR+LG+ T + +G V
Sbjct: 121 HVDFARAGARATRTVTVPPGLVYSTGGEVPPEHDVPIAHTLEPELRRLGMPTRMVRGKVC 180
Query: 169 LFKD---------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D +T+C++G+VL Q R+LKL M++F+V L +++ G L
Sbjct: 181 LGGDEKGEGMKEGYTICREGEVLDSRQTRLLKLFSVCMSEFRVSLLAYWSAASGEVTEL 239
>gi|400597492|gb|EJP65225.1| ribosomal protein L10 [Beauveria bassiana ARSEF 2860]
Length = 244
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 18/231 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + L++ KKG E+K L + AV +Y + FVFSV NMRNS LK+VR +
Sbjct: 1 MPKSKRSRTFNLTQVNKKGREQKDKLFQNIRDAVPQYQHCFVFSVDNMRNSYLKNVRREM 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+MA ALG++ E+ + I + L G GLL T+R+ D VL +FD
Sbjct: 61 SDSRLFFGKTKLMAKALGQTPEEAVAPGIDACARLLAGNIGLLLTDRAPDTVLDYFDNLA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + G + E P H++EP+LR+LG+ T + KG V
Sbjct: 121 LVDFARAGIVAPRAFSIPPGVVYATAGEVPAEHDVPLEHTLEPELRRLGVPTRMVKGRVV 180
Query: 169 LFKD------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK+GDVL Q R+LK+ +++FKV + +++ + G
Sbjct: 181 LGSEDGEGEAYVVCKEGDVLDSRQTRLLKMFDVCLSEFKVKVLAYWSAESG 231
>gi|294900043|ref|XP_002776871.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
gi|239884072|gb|EER08687.1| mRNA turnover protein 4 mrt4, putative [Perkinsus marinus ATCC
50983]
Length = 246
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 139/233 (59%), Gaps = 3/233 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLE-RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ V L+K K+ +K +E+ + +EK+ +V ++N RN+ LK +R+D
Sbjct: 1 MPKSKRNQVVNLTKVTKRQTRVKKDKAIEEIRECLEKFRFAYVLKLENQRNNLLKGLRDD 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K R F G+NKVM ALG E E ++ IH +S + G+ GLL T+ + D + +
Sbjct: 61 LKPGRLFCGRNKVMQVALGVDPESECQEGIHALSEHISGEVGLLLTDMTADQLSDILVNH 120
Query: 120 EDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
E +FA+SG +ST D+ L+ G L FPHS EP LR+LGL T L G + L D+ VCK
Sbjct: 121 EQSNFARSGCVSTADITLEAGDDALSRFPHSQEPFLRKLGLPTLLVNGKIRLMGDYEVCK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYD 230
G LTPEQ +++KLL MA F+V + ++K++ ++++ M++ D
Sbjct: 181 TGKALTPEQCQLVKLLGIPMAIFRVTIIAQWSKEDSQCTIYEEQQEGGMEVDD 233
>gi|298714770|emb|CBJ25669.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 228
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 142/222 (63%), Gaps = 5/222 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+R++KV+L+KT KKG E KQ + E+ K V++Y +++VFS N+R+ LK+VR D+
Sbjct: 1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDF 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSRFF GKNKVM ALGKS++DE + N+ VS LKGQ GLLFT R ++V +F
Sbjct: 61 REDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKAL 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
D A GF+ E + L G L ++P S+ Q R+LG+ + +GV+ K +C G
Sbjct: 121 AVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLD 220
+ ++PE A++L L KK+A F + LL W EG FE L +
Sbjct: 181 EPISPEGAKLLALYDKKIATFTMSLLCRW---SEGEFEALAE 219
>gi|384249317|gb|EIE22799.1| hypothetical protein COCSUDRAFT_66402 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 141/234 (60%), Gaps = 6/234 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V L+K KK E K+ + + V++Y +I++ +NMRN K K++R +
Sbjct: 1 MPKSKRNKIVPLTKVKKKTKEWKEGIITSVRNFVDQYPSIYLIKYENMRNDKFKELREEK 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
D SRF NKV+ ALG + DE KN+ ++S + G GL FT D VL F+ +
Sbjct: 61 LDTSRFCLASNKVLRVALGHDETDEYRKNLALLSDEITGSVGLFFTQLPHDQVLTLFEEF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
E+ D+A++G +TED EL GPL PH++EP LR+ GL T LNKGVV L D TV
Sbjct: 121 EELDYARAGSRATEDFELVAGPLNGPLGPLPHTVEPLLRKYGLPTKLNKGVVELVSDVTV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKVL-LYLWYNKKEGTFENLLDREKTPMDI 228
C+ GD+LTP QA +L++ + KMA F++ + W+ + + E ++ P+ I
Sbjct: 181 CRAGDMLTPNQAALLRVFEIKMAAFRMYPIGHWHAEDQMYHEIPQPAQEHPIGI 234
>gi|121714028|ref|XP_001274625.1| mRNA turnover protein MRT4 [Aspergillus clavatus NRRL 1]
gi|119402778|gb|EAW13199.1| 60S acidic ribosomal protein P0, putative [Aspergillus clavatus
NRRL 1]
Length = 248
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 145/246 (58%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SK KK E+ + L + + VE Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPRSKRARIVHESKVTKKSHKEQTRRLYANIRECVENYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVM+ ALG++ E+E N++ ++ L G GLLFT+R + VL +FD +
Sbjct: 61 FADSRVFFGKTKVMSVALGQNPENEAAPNLYKLTPYLTGAVGLLFTSRDPESVLSYFDAF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA+SG +ST + G + E P H+IEP LR+LG+ T L KG V
Sbjct: 121 RPLDFARSGTVSTRSFSIPNGQVYSRAGEIPASEDEPLSHTIEPDLRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + + VCK+G++L Q +LK+ A+F V + + + G + +L+ +
Sbjct: 181 MLELTEGQESYPVCKEGEILDSRQTTLLKMFGVASAEFHVDVKAQWTRSTGEVK-ILETD 239
Query: 223 KTPMDI 228
++ M++
Sbjct: 240 QSGMEV 245
>gi|340057598|emb|CCC51944.1| putative 60S acidic ribosomal protein [Trypanosoma vivax Y486]
Length = 224
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 134/226 (59%), Gaps = 5/226 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V L+KT K E K L +++ A+E Y +++ F + N+R S L+ +R +
Sbjct: 1 MPKSKRAVIVPLTKTRSKTREEKDGLINKIRDALEDYTDVYAFELFNIRTSILQRIREER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR F G NK++ ALG+ QE N++ +S L G CGLLFTN K +V +F
Sbjct: 61 REDSRLFLGNNKLLMIALGRDQESSQRPNLYKLSKYLTGSCGLLFTNLPKKEVEKYFASV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+A++G +T + L+ GPLP+F HS+ L +LGL L+KGV+ L +D TVC+ G
Sbjct: 121 SAPVYARTGQEATTSLLLRAGPLPQFSHSMFDHLSKLGLPIKLDKGVIVLLRDTTVCEPG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLDREKT 224
D L+ E A++LKL + +FK+LL W N G L D++ T
Sbjct: 181 DTLSAEAAQLLKLFGVQCTEFKLLLNARWSN---GVATRLADKDGT 223
>gi|291221114|ref|XP_002730570.1| PREDICTED: mRNA turnover 4 homolog [Saccoglossus kowalevskii]
Length = 177
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/155 (52%), Positives = 105/155 (67%), Gaps = 3/155 (1%)
Query: 73 MAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
M+ A G+ E+E +N+H +S L G G+LFTN++KD+ + WF+ Y D +SG +
Sbjct: 1 MSLAFGRRPENEYRENLHRLSKRLAGNVGILFTNKTKDETIKWFEGYSFADHPRSGNKAA 60
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
V L EGPL +FPHS+EP LRQLGL T L KG+VTL +HTVCK G LTPEQARILKL
Sbjct: 61 YTVTLDEGPLEQFPHSMEPHLRQLGLPTTLKKGIVTLLSEHTVCKAGHNLTPEQARILKL 120
Query: 193 LKKKMAKFKVLL-YLWYNKKEGTFENLLDREKTPM 226
L KM+KF + L +W N +GTFENL + K P+
Sbjct: 121 LDHKMSKFSIKLECMWSN--DGTFENLSVKNKKPV 153
>gi|322702159|gb|EFY93907.1| 60S acidic ribosomal protein P0, putative [Metarhizium acridum CQMa
102]
Length = 247
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 140/255 (54%), Gaps = 27/255 (10%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K L + AV +Y + FVFSV NMRNS LK+VR++
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDKLFQNIRDAVPEYQHCFVFSVDNMRNSYLKNVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+MA ALG+S + I I ++ L G GLL TNR + +L +FD +
Sbjct: 61 NDSRLFFGKTKLMAKALGQSPSEAIAPGIEDLTQYLSGTVGLLLTNRPVESILEYFDNFA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G S D + G + E P H+IEP+LR L + T + KG V
Sbjct: 121 PVDFARAGVTSPRDFTIPAGVVYATAGEVPVEHDVPLEHTIEPELRMLNVPTRMVKGRVV 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + + VCK+GDVL Q R+LKL +++FKV + +++ G E
Sbjct: 181 LGDESGQGEGYVVCKEGDVLDSRQTRLLKLFGVCISEFKVKILAYWSSASG--------E 232
Query: 223 KTPMDIYDMED-DEN 236
T +D ME DEN
Sbjct: 233 VTEVDPSAMEGVDEN 247
>gi|299743652|ref|XP_001835898.2| hypothetical protein CC1G_02986 [Coprinopsis cinerea okayama7#130]
gi|298405755|gb|EAU85963.2| hypothetical protein CC1G_02986 [Coprinopsis cinerea okayama7#130]
Length = 231
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 125/197 (63%), Gaps = 9/197 (4%)
Query: 26 LRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDE 84
+ +EL EK+ ++F V +MRN+ LK VRN WKDS R FFG+ VMA ALG + E+E
Sbjct: 1 MMNELQVNAEKWRYCWLFEVGSMRNAHLKTVRNLWKDSARIFFGRGAVMAKALGTTPEEE 60
Query: 85 IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL-- 142
++ IH ++ +KGQ GLLFT+ +V+ WF ++ DFA++G I++ V L GP+
Sbjct: 61 HKEGIHKLAKQIKGQVGLLFTDTEPQEVIEWFADFKQPDFARAGNIASRTVILPAGPVMQ 120
Query: 143 -----PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
PE FPH+ +PQLR+LGL T +++GV TL H +C +G LT EQ ++LKL+ ++
Sbjct: 121 RHSDPPEPFPHNEDPQLRKLGLTTIMDRGVPTLTNPHKICTQGKPLTAEQTQLLKLIGER 180
Query: 197 MAKFKVLLYLWYNKKEG 213
M F+V L ++ G
Sbjct: 181 MVHFRVGLLARWDAATG 197
>gi|378726744|gb|EHY53203.1| 50S ribosomal protein L10 [Exophiala dermatitidis NIH/UT8656]
Length = 248
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 26/249 (10%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP SKR++ + SKT K E + L + +A EKY+ I+VF VQNMRN+ +K VR ++
Sbjct: 1 MPPSKRNRVIPTSKTRKNRKELVRRLAANVQEAAEKYSYIWVFDVQNMRNNFIKQVRKEF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR GK KV+ LG+++E E + + +KG+ GLLFT+R +V +F+ +
Sbjct: 61 DDSRIMMGKTKVLMVGLGQTEETECVPGVSALGPHVKGEVGLLFTDREPKEVEEYFEDFL 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------P-----EFPHSIEPQLRQLGLQTNLNKGVVTL 169
EDFA+SG ++T +V + GP+ P P IEP LR+LG+ T L KG + L
Sbjct: 121 AEDFARSGSVATREVRIPPGPIHTQYGVPGGEDDPLPIQIEPTLRKLGIPTRLQKGTIVL 180
Query: 170 ----------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLL 219
+ + VC++GD L Q ILK+L KM++FK+ L ++KKE T
Sbjct: 181 EEPADGSMVEEEGYVVCREGDTLDSRQTSILKILGVKMSEFKIELKAVFDKKEATV---- 236
Query: 220 DREKTPMDI 228
RE MD+
Sbjct: 237 -REVGEMDV 244
>gi|261189729|ref|XP_002621275.1| mRNA turnover protein MRT4 [Ajellomyces dermatitidis SLH14081]
gi|239591511|gb|EEQ74092.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis SLH14081]
Length = 242
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 132/230 (57%), Gaps = 16/230 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SK KK E+ + L + AV +Y++IF+FSV NMRN+ LKDVR +
Sbjct: 1 MPVSKRARLVHESKVAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ +S L G GLLFT+RS VL +FD +
Sbjct: 61 FSDSRLFFGKTKVMAVALGNTPETACAPNLEKLSPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + E P H+IEP LR+LG+ T L G V
Sbjct: 121 HPTDFARAGTVTPRSFTIPSGIVYSHAGEVPSNLDEPLSHTIEPTLRKLGVPTRLIAGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
L D + VCK GD L Q +LK+ +A+F+V + +N+++G+
Sbjct: 181 VLEMDGDGYQVCKAGDTLDSRQTTLLKIFGVAVAEFRVEMKAQWNRQDGS 230
>gi|242761912|ref|XP_002340273.1| mRNA turnover protein MRT4 [Talaromyces stipitatus ATCC 10500]
gi|218723469|gb|EED22886.1| 60S acidic ribosomal protein P0, putative [Talaromyces stipitatus
ATCC 10500]
Length = 246
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 142/245 (57%), Gaps = 19/245 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SKT KK E+ + L + + VE+Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPVSKRARIVHESKTSKKNHKEQTRRLFANIRECVEQYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ D R FFGK KVMA ALG + E +N+ ++ L G GLLFT+RS +DV+ + + +
Sbjct: 61 FSDGRLFFGKTKVMAVALGNTPETAFAQNLEKLTPFLTGAVGLLFTSRSPEDVITYLESF 120
Query: 120 EDEDFAKSGFISTEDVEL-------KEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G +ST + + G +P H+IEP LR+LG+ T L KG V
Sbjct: 121 HPSDFARAGTVSTRSFTIPNGVVYSRAGEIPTSEDDPISHTIEPALRKLGVPTRLVKGQV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L K + VC++G+ L Q +LK+ ++F++ L +++K G +L++
Sbjct: 181 VLELLDGEKGYAVCREGETLDSRQTTLLKMFGVATSEFRIDLKAQWDRKTGEV-RILEKS 239
Query: 223 KTPMD 227
+ MD
Sbjct: 240 EGAMD 244
>gi|239612960|gb|EEQ89947.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis ER-3]
gi|327352133|gb|EGE80990.1| 60S acidic ribosomal protein P0 [Ajellomyces dermatitidis ATCC
18188]
Length = 242
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 132/230 (57%), Gaps = 16/230 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SK KK E+ + L + AV +Y++IF+FSV NMRN+ LKDVR +
Sbjct: 1 MPISKRARLVHESKVAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ +S L G GLLFT+RS VL +FD +
Sbjct: 61 FSDSRLFFGKTKVMAVALGNTPETACAPNLEKLSPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + E P H+IEP LR+LG+ T L G V
Sbjct: 121 HPTDFARAGTVTPRSFTIPSGIVYSHAGEVPSNLDEPLSHTIEPTLRKLGVPTRLIAGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
L D + VCK GD L Q +LK+ +A+F+V + +N+++G+
Sbjct: 181 VLEMDGDGYQVCKAGDTLDSRQTTLLKIFGVAVAEFRVEMKAQWNRQDGS 230
>gi|156040916|ref|XP_001587444.1| mRNA turnover protein MRT4 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154695820|gb|EDN95558.1| hypothetical protein SS1G_11436 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 237
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 124/220 (56%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + V L+K KKG E L + ++++ Y + FVFSV+NMRN+ LKDVRN+
Sbjct: 1 MPKSKRARVVHLTKVDKKGKELSLKLFANVRESLDTYQHCFVFSVENMRNTYLKDVRNEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK KVM+ ALG E + N ++S L G GLLFTNR ++ +F
Sbjct: 61 TDCRLFFGKTKVMSKALGSDPASEYQLNTSLLSPHLVGNVGLLFTNREPSSIITYFQELS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE------------FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + + G + HS+EP+LR+L + T L KG +T
Sbjct: 121 KTDFARAGTEASRNFTIPAGIVYSMGGEIDAENDIPMAHSLEPELRRLNVPTTLTKGKIT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L + VC +GDVL Q R+LKL A+F V LL W
Sbjct: 181 LENPYCVCNEGDVLDSRQTRLLKLFGVATAEFTVQLLAYW 220
>gi|154305181|ref|XP_001552993.1| mRNA turnover protein MRT4 [Botryotinia fuckeliana B05.10]
gi|347826794|emb|CCD42491.1| similar to mRNA turnover protein 4 homolog [Botryotinia fuckeliana]
Length = 237
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 122/220 (55%), Gaps = 13/220 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + V L+K KKG E L + ++++ Y + FVFSV NMRN+ LKDVRN+
Sbjct: 1 MPKSKRARVVHLTKVDKKGKELSLKLFANVRESLDSYQHCFVFSVDNMRNTYLKDVRNEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK KVMA ALG E + N ++S L G GLLFTNR ++ +F
Sbjct: 61 SDCRLFFGKTKVMAKALGSDPSSEYQPNTSLLSPHLVGNVGLLFTNREPSSIITFFQDLS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + + G + HS+EP+LR+L + T L KG +T
Sbjct: 121 KTDFARAGTEASRNFTIPAGIVYSMGGEISAENDVPMAHSLEPELRRLNVPTTLTKGKIT 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L + VC +GDVL Q R+LKL A F V LL W
Sbjct: 181 LENPYCVCNEGDVLDSRQTRLLKLFGVATADFSVQLLAYW 220
>gi|295670645|ref|XP_002795870.1| mRNA turnover protein MRT4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284955|gb|EEH40521.1| mRNA turnover protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 243
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 136/230 (59%), Gaps = 16/230 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SKT KK E+ + L + AV +Y++IF+FSV NMRN+ LK+VR +
Sbjct: 1 MPISKRARLVHESKTAKKSHKEQTRRLFANIQTAVTQYDHIFLFSVDNMRNTYLKEVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++ ++ L G GLLFT+RS VL +F+ +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLNQLTPFLTGNVGLLFTSRSPQSVLHFFNSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++T + G + E P H+IEP LR+LG+ T L KG V
Sbjct: 121 HPTDFARAGTVTTRSFTIPSGIVYSQGGEVPADQDQPISHTIEPMLRKLGIPTRLVKGKV 180
Query: 168 TL---FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
L + + VCK G+ L Q +LK+ +A+F+V + +N+++G+
Sbjct: 181 VLEVEGEGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNREDGS 230
>gi|367027922|ref|XP_003663245.1| hypothetical protein MYCTH_2304925 [Myceliophthora thermophila ATCC
42464]
gi|347010514|gb|AEO58000.1| hypothetical protein MYCTH_2304925 [Myceliophthora thermophila ATCC
42464]
Length = 278
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 134/239 (56%), Gaps = 21/239 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + L++ KK E+K L + + + +Y + F FSV NMRN+ LK+VR++
Sbjct: 1 MPKSKRARVYHLTQVSKKTREQKDKLFSSIRECIPQYQHCFAFSVDNMRNNYLKEVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+ A ALG + ED I ++ L G GLLFTNR ++++ +FD
Sbjct: 61 SDCRMFFGKTKLTARALGTTPEDAQADGIDGLARHLTGAVGLLFTNRDPEEIISYFDSLS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL--------PE----FPHSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ V + G + PE H++EP+LR+LG+ T + KG V
Sbjct: 121 HVDFARAGTVAPRTVTVPPGVVYSTGGEVPPENDVPIAHTLEPELRRLGMPTRMVKGKVC 180
Query: 169 LFKD---------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D +T+CK+GDVL Q R+LKL +++F+V L +++ G +L
Sbjct: 181 LGADESGEGRVGGYTICKEGDVLDSRQTRLLKLFSICLSEFRVALLAYWSASTGNVTDL 239
>gi|399217154|emb|CCF73841.1| unnamed protein product [Babesia microti strain RI]
Length = 219
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYN-NIFVFSVQNMRNSKLKDVRND 59
MP SKR++ V SK K G RK+ L D + +++ + ++V + N RN+KLK++R
Sbjct: 1 MPLSKRNRIVATSKVKKDGKNRKRVLIDSIRNSIQNEDVYVYVLELSNQRNAKLKELRGI 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
R F+GKNKVM ALG S E EI +NIH +S + G+ LL T + + +
Sbjct: 61 LFPGRIFYGKNKVMQIALGNSPETEICENIHKLSQMITGERALLITKEEPNMICKKLASF 120
Query: 120 EDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
+ +FAK+GF+S + LKE PL +FP S+EPQ RQLGL T LN G + L + VC
Sbjct: 121 KPMEFAKTGFVSNTTITLKEDDKPLKDFPGSMEPQFRQLGLPTRLNMGKIELMGEANVCN 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+G+ L+ QA +LKLL K+ +F++ +YN +GTF+ L
Sbjct: 181 EGEPLSSNQANLLKLLGHKLVEFRIAALAFYN--DGTFKQL 219
>gi|71748336|ref|XP_823223.1| 60S acidic ribosomal protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832891|gb|EAN78395.1| 60S acidic ribosomal protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333131|emb|CBH16126.1| 60S acidic ribosomal protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 226
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 127/211 (60%), Gaps = 1/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V L+KT K E K L +++ A++ Y +++ F + N+R + L+ +R +
Sbjct: 1 MPKSKRATIVPLTKTRSKTREEKDELINKIRDALDDYTDVYTFELSNIRTNILQQIREER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR F G NK++ ALG+ N+H +S L G CGLLFTN DV +F
Sbjct: 61 RNDSRLFLGNNKLLMIALGRDDSSSQRPNLHKLSKYLTGSCGLLFTNLPHQDVKEYFKGV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ FA++G ++T + L+ GPL +FPHS+ L +LGL L+KGV+ L +D TVC+ G
Sbjct: 121 SADVFARTGQVATCPLLLRTGPLAQFPHSMFDHLSRLGLPIKLDKGVIVLLRDTTVCEVG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
D LT E A++LKL + A+FK+ L + K
Sbjct: 181 DTLTAEAAQLLKLFGIQSAEFKLELTAHWAK 211
>gi|346327422|gb|EGX97018.1| 60S acidic ribosomal protein P0 [Cordyceps militaris CM01]
Length = 248
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 138/246 (56%), Gaps = 27/246 (10%)
Query: 4 SKRDKKVTLSKTVKKGLERK----QNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
SKR K L++ KKG E+K QN+RD AV +Y + VF + NMRN+ LK+VR +
Sbjct: 6 SKRSKTFNLTQVNKKGREQKDKLFQNIRD----AVPEYQHCVVFCIDNMRNTYLKNVRRE 61
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR FFGK K+MA ALG++ E+ + I ++ L G GL+FTNR VL +FD
Sbjct: 62 LSDSRLFFGKTKLMAKALGQTPEEAVAPGIQAIARILAGNVGLVFTNRDPAAVLAYFDGL 121
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++T + G + E P H++EP+LR+LG+ T + KG V
Sbjct: 122 ALVDFARAGVVATRTFSIPTGVVHATAGEVPAEHDVPLEHTLEPELRRLGVPTRMVKGRV 181
Query: 168 TLFKD------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDR 221
L + + VCK+GDVL Q R+LK+ +++FKV + +++ G +D
Sbjct: 182 VLGDEDGEGEAYVVCKEGDVLDSRQTRLLKMFDVCLSEFKVKVLAYWSAATGEVTQ-VDA 240
Query: 222 EKTPMD 227
TPM+
Sbjct: 241 TTTPME 246
>gi|255575440|ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
gi|223531967|gb|EEF33780.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
Length = 182
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 48 MRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTN 106
MRN K K+ R K SRFF G NKVM +LG++ DE+ IH VS L+G GL TN
Sbjct: 1 MRNLKFKEFREQLKTSSRFFLGSNKVMQVSLGRTVADEVRPGIHKVSKLLRGDAGLFLTN 60
Query: 107 RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
K++V F+ YE+ DFA++G I+TE VELKEGPL +F H +EP LR+ G+ LNKGV
Sbjct: 61 LPKEEVERLFNEYEEYDFARTGSIATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGV 120
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
V L D VC++G L+PE ARIL+LL KMA F++ L+ W
Sbjct: 121 VELVSDFVVCEEGKHLSPESARILRLLGIKMATFRLHLICRW 162
>gi|380489303|emb|CCF36799.1| mRNA turnover protein 4 [Colletotrichum higginsianum]
Length = 224
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 127/220 (57%), Gaps = 18/220 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ V L++ KK E+K L + ++V +Y + FVF V NMRN+ LK+VR++
Sbjct: 1 MPKSKRNRVVNLTQVNKKTREQKDKLFANIRESVPEYQHCFVFGVNNMRNNYLKEVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG+ + I ++ L G GLLFTNR +L +FD
Sbjct: 61 NDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLAGTVGLLFTNRDPAAILSYFDGVS 120
Query: 121 DEDFAKSGFISTEDVELKEG----PLPEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T + G P E P HSIEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGTVATRGFSIPSGVVYAPGGEVPAEHDVPLEHSIEPELRRLGMPTRMIKGRVC 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
L D+ VC++GDVL Q R+LKL +++FKV
Sbjct: 181 LGDAEGGGDDYVVCREGDVLDSRQTRLLKLFGICLSEFKV 220
>gi|154283071|ref|XP_001542331.1| mRNA turnover protein MRT4 [Ajellomyces capsulatus NAm1]
gi|150410511|gb|EDN05899.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225561664|gb|EEH09944.1| mRNA turnover protein [Ajellomyces capsulatus G186AR]
Length = 243
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 140/248 (56%), Gaps = 22/248 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SK KK E+ + L + AV +Y+++F+FSV NMRN+ LKDVR++
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAVTQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ ++ L G GLLFT+RS VL +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + H+IEP LR+LG+ T L G V
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQAGEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
L D + VCK G+ L Q +LK+ +A+F+V + +N+++G+ +LDR+
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNREDGSIV-ILDRKD- 238
Query: 225 PMDIYDME 232
+DME
Sbjct: 239 ----HDME 242
>gi|444719210|gb|ELW60008.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 274
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 115/207 (55%), Gaps = 39/207 (18%)
Query: 2 PKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK 61
KSK DKK++L+KT KKGL KQNL +EL K V+ +F+ S+ NMRN KLKD+RN WK
Sbjct: 104 SKSKHDKKISLTKTAKKGLGLKQNLTEELRKCVDTSKYLFLVSMVNMRNGKLKDIRNTWK 163
Query: 62 DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYED 121
S+ F GKNK ++V WF Y +
Sbjct: 164 HSQMFSGKNK--------------------------------------EEVNEWFTEYTE 185
Query: 122 EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDV 181
F +G + L GPL + PHS+E QLRQL L T L GVVTL D+ VC++GDV
Sbjct: 186 MAFTHAGNKAAFTASLGSGPLEQLPHSMELQLRQLSLPTALKSGVVTLLSDYEVCREGDV 245
Query: 182 LTPEQARILKLLKKKMAKFKVLL-YLW 207
LT EQAR+LKL +MA+FKV + Y+W
Sbjct: 246 LTLEQARVLKLFGYEMAEFKVTMKYMW 272
>gi|325091103|gb|EGC44413.1| mRNA turnover protein [Ajellomyces capsulatus H88]
Length = 243
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 140/248 (56%), Gaps = 22/248 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SK KK E+ + L + A+ +Y+++F+FSV NMRN+ LKDVR++
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAITQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ ++ L G GLLFT+RS VL +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + H+IEP LR+LG+ T L G V
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQAGEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
L D + VCK G+ L Q +LK+ +A+F+V + +N+++G+ +LDR+
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNREDGSIV-ILDRKD- 238
Query: 225 PMDIYDME 232
+DME
Sbjct: 239 ----HDME 242
>gi|50557364|ref|XP_506090.1| mRNA turnover protein MRT4 [Yarrowia lipolytica CLIB122]
gi|49651960|emb|CAG78903.1| YALI0F31317p [Yarrowia lipolytica CLIB122]
Length = 233
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 127/221 (57%), Gaps = 12/221 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K + L+K KK E K+ + DE+ ++++ FVFSV+ MRN+ KD+R DW
Sbjct: 1 MPKSKRNKVIALTKVEKKTREDKEVIVDEIHNYLDEHKYCFVFSVEGMRNTFFKDLRADW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K SR FFG+ K+MA ALGKS+EDE + + +S + G GLL T+ V +F+ +
Sbjct: 61 KGSRIFFGRTKIMAKALGKSEEDEYKAGLGALSEYMSGDVGLLLTDEEPQVVKDYFESFV 120
Query: 121 DEDFAKSGFISTED-------VELKEGPLP---EFP--HSIEPQLRQLGLQTNLNKGVVT 168
ED+A++G +ST V G +P + P HS+EP LR LG+ T L G V
Sbjct: 121 REDYARAGQVSTVTFTIPAGVVHTTGGKIPAEDDVPVVHSMEPTLRSLGMPTQLKAGKVE 180
Query: 169 LFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
LF + VCK G L Q R+LK + FKV +Y+
Sbjct: 181 LFAPYEVCKTGQTLDSRQTRLLKHFGVTSSFFKVHTVAYYD 221
>gi|240275268|gb|EER38782.1| mRNA turnover protein [Ajellomyces capsulatus H143]
Length = 243
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 140/248 (56%), Gaps = 22/248 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SK KK E+ + L + A+ +Y+++F+FSV NMRN+ LKDVR++
Sbjct: 1 MPVSKRARVVHESKVTKKSHKEQTRRLFANIQTAITQYDHLFLFSVDNMRNTYLKDVRSE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ ++ L G GLLFT+RS VL +FD +
Sbjct: 61 FADSRLFFGKTKVMAVALGNTPETACAPNLEKLAPYLTGAVGLLFTSRSPQSVLDFFDSF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + H+IEP LR+LG+ T L G V
Sbjct: 121 HPTDFARAGAVAPRSFTIPSGIVYSQACEVSSSLDAPLSHTIEPTLRKLGVPTRLIGGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
L D + VCK G+ L Q +LK+ +A+F+V + +N+++G+ +LDR+
Sbjct: 181 VLEMDGDGYQVCKAGETLDSRQTTLLKIFGVAVAEFRVEMKAQWNREDGSIV-ILDRKD- 238
Query: 225 PMDIYDME 232
+DME
Sbjct: 239 ----HDME 242
>gi|290994995|ref|XP_002680117.1| 60S acidic ribosomal protein [Naegleria gruberi]
gi|284093736|gb|EFC47373.1| 60S acidic ribosomal protein [Naegleria gruberi]
Length = 237
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 134/221 (60%), Gaps = 1/221 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPK+KRDK +TL+KT K+ E+K L +E+ A+E++NNI++ + N R + +K++R D
Sbjct: 1 MPKAKRDKLITLTKTKKRSTKEQKNKLVEEIRNAIEEFNNIYILDLSNCRTNHVKEIRRD 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ +S+FF KNKVM ALG S E+E+E ++H S L L T+R K +V +F +
Sbjct: 61 FNESKFFMTKNKVMRVALGTSPENEVENDLHNASKFLTATRALFITDRPKAEVAKYFANF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ D+AK GF++T+ + L+ GP+ P S+E +L LGL + V+ + + +C G
Sbjct: 121 KRSDYAKVGFVATKTITLEAGPVDWMPFSLEERLLNLGLPIEVKNKVINILRPFNLCTFG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+ +T +QA++LK ++ +F + Y+KK E ++
Sbjct: 181 EPITAQQAKLLKHFGHELTEFNASIVCHYDKKTHKLEKFVE 221
>gi|302828484|ref|XP_002945809.1| hypothetical protein VOLCADRAFT_72439 [Volvox carteri f.
nagariensis]
gi|300268624|gb|EFJ52804.1| hypothetical protein VOLCADRAFT_72439 [Volvox carteri f.
nagariensis]
Length = 272
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 6/213 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V+L+K KK K+ L +++ + ++ Y +++F NMR + K +R +
Sbjct: 1 MPKSKRNKVVSLTKVKKKDRAWKEGLLEKIRQCLDTYPTVYLFKHYNMRTERFKQLREEL 60
Query: 61 KDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+DS RF G +M ALG++ DE + + +S +KG GLLFT S ++V + Y
Sbjct: 61 QDSSRFILGSTSLMQVALGRTAADEYKTGLSRLSELIKGTVGLLFTKLSHEEVQGAIESY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLP----EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
ED+A+ G + D L GPL PH++EPQLR+ GL T LNKGVV L DHTV
Sbjct: 121 VYEDYARVGARAAHDFALTAGPLGGPMGPLPHTLEPQLRKFGLPTKLNKGVVELLADHTV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
C+ G L QA IL++ KMA+ K+ LL +W
Sbjct: 181 CRTGQKLDANQAGILRVFDIKMAECKLKLLAVW 213
>gi|429857181|gb|ELA32060.1| 60s acidic ribosomal protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 247
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 19/232 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ V L++ KK E+K L + + V +Y + FVF+V NMRN+ LK VR++
Sbjct: 1 MPKSKRNRIVNLTQVSKKTREQKDKLFANIRETVPEYQHCFVFAVDNMRNNYLKQVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG+ + I ++ L G GLLFTNR VL +F
Sbjct: 61 TDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLSGTVGLLFTNRDPKAVLEYFKGVS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T D + G + E P HSIEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGTVATRDFVIPPGVVYATGGEVPAEHDVPMEHSIEPELRRLGMPTRMIKGRVC 180
Query: 169 L-------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + +TVCK+GD L Q R+LKL +++FKV + +++ G
Sbjct: 181 LGDADGSSGEGYTVCKEGDTLDSRQTRLLKLFSICLSEFKVQVMAYWSAASG 232
>gi|407404046|gb|EKF29692.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi marinkellei]
Length = 229
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT K E K L + + KA++ Y +++ F++ N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K DS F G NK++ ALG+ +E N+H + L G CGLLFTN K +V +F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ +A++G +T + L+ GPLP+FPHS+ L +LGL L+KGV+ L +D TVC+
Sbjct: 121 GAQVYARTGQTATRSLVLRAGPLPQFPHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEPN 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++L+L + A+F++ L W N
Sbjct: 181 DSLSAEAAQLLRLFGIQSAEFRIDLTAHWKN 211
>gi|67464035|ref|XP_648494.1| 60S acidic ribosomal protein PO [Entamoeba histolytica HM-1:IMSS]
gi|56464665|gb|EAL43111.1| 60S acidic ribosomal protein PO, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 225
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 124/198 (62%), Gaps = 3/198 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
E K L + +A +KY+ +F+F +R+ + +R DW+DS FFFG NKVM ALG++
Sbjct: 14 EIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGRT 73
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++DEI+ H ++ LKG CGL FTN+ K+++L +F +DFA+SG ++T D + EG
Sbjct: 74 EQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSVATMDFVVPEG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
PLP F S+E LR+ L L G+++ +++ VCKKG LTP+ AR+L+ KMA F
Sbjct: 134 PLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCKKGQKLTPQAARLLEYFDIKMAVF 192
Query: 201 KVLLYLWYNKKEGTFENL 218
++ + ++G FE L
Sbjct: 193 EIRVLSIV--QDGKFEEL 208
>gi|310789383|gb|EFQ24916.1| ribosomal protein L10 [Glomerella graminicola M1.001]
Length = 249
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 140/252 (55%), Gaps = 21/252 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ V L++ KK E+K L + ++V +Y + FVFSV NMRN+ LK+VR++
Sbjct: 1 MPKSKRNRVVNLTQVNKKTREQKDKLFANIRESVPEYQHCFVFSVDNMRNNYLKEVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG+ + I ++ L G GLLFTNR +L +F+
Sbjct: 61 NDCRLFFGKTKLMAKALGQDPSSAVADGIDRLTPFLAGTVGLLFTNRDPAAILSYFEGVS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T + G + E P HSIEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGTVATRGFTVPAGVVYATGGEVPAEHDVPMEHSIEPELRRLGMPTRMVKGRVC 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L + + VC++GDVL Q R+LKL +++FKV + +++ G + +
Sbjct: 181 LGDAEGGGEGYVVCREGDVLDSRQTRLLKLFGICLSEFKVQVLAYWSASSG---KVTEVN 237
Query: 223 KTPMDIYDMEDD 234
MD D E D
Sbjct: 238 PNAMDGVDDESD 249
>gi|258567042|ref|XP_002584265.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905711|gb|EEP80112.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 244
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 135/234 (57%), Gaps = 16/234 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K V SK KK E+ + L + +AV KY+++F+FSV NMRN+ LKDVR +
Sbjct: 1 MPVSKRAKVVHESKVTKKSHKEQTRRLYANVQEAVSKYDHLFIFSVDNMRNTYLKDVRTE 60
Query: 60 W-KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
+ +D R FFGK KVMA ALG + E N+ ++ L G GLLFT R+ + VL +F
Sbjct: 61 FSEDGRLFFGKTKVMAVALGTTPETAFAPNLDKLAPLLNGSIGLLFTTRAPESVLGYFSS 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGV 166
+ DFA++G +S + G + E P H+IEP LR+LG+ T L +G
Sbjct: 121 FHPTDFARAGNVSPRAFTIPPGIVYAHAGEIPAEHDEPLSHTIEPTLRKLGVPTRLVRGK 180
Query: 167 VTL-FKD-HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
VTL +D + VCK G+ L Q +LK+ +A+FKV + +NK+ G E L
Sbjct: 181 VTLEMQDGYQVCKAGETLDSRQTSLLKMFGVAVAEFKVEMRAHWNKETGKVEVL 234
>gi|194697260|gb|ACF82714.1| unknown [Zea mays]
Length = 183
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
Query: 48 MRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTN 106
MRN KLKD+R K S R F KVM ALG+S DE + +H +S L+G GLLFTN
Sbjct: 1 MRNQKLKDLREQLKSSSRIFLAGKKVMQIALGRSAADEAKTGLHKLSKFLQGNSGLLFTN 60
Query: 107 RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
+DDV F +E+ DFA++G + + VELKEGPL +F H +EP LR+ GL LNKGV
Sbjct: 61 LPRDDVERMFREFEEHDFARTGSTAADTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGV 120
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
V L DH VC++G L+PE A+IL+LL +MA F++ L ++ E
Sbjct: 121 VELVADHVVCEEGKPLSPEAAQILRLLGIQMATFRLYLVCRWSSDE 166
>gi|407849420|gb|EKG04162.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 229
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT K E K L + + KA++ Y +++ F++ N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K DS F G NK++ ALG+ +E N+H + L G CGLLFTN K +V +F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ +A++G +T + L+ GPLP+F HS+ L +LGL L+KGV+ L +D TVC+
Sbjct: 121 GAQVYARTGQTATSSLVLRAGPLPQFTHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEAN 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++LKL + A+F++ L W N
Sbjct: 181 DTLSAEAAQLLKLFGIQSAEFRIDLTAHWAN 211
>gi|71657243|ref|XP_817140.1| 60S acidic ribosomal protein [Trypanosoma cruzi strain CL Brener]
gi|70882312|gb|EAN95289.1| 60S acidic ribosomal protein, putative [Trypanosoma cruzi]
Length = 229
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V L+KT K E K L + + KA++ Y +++ F++ N+R + L+ +R +
Sbjct: 1 MPKSKRAKIVPLTKTRAKTREDKDKLINRIRKALDDYTDVYSFTLSNVRTNILQQIREER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K DS F G NK++ ALG+ +E N+H + L G CGLLFTN K +V +F
Sbjct: 61 KGDSCLFLGNNKLIMIALGRDEESSQRPNLHKLCKFLVGSCGLLFTNLPKKEVKSYFASV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ +A++G +T + L+ GPLP+F HS+ L +LGL L+KGV+ L +D TVC+
Sbjct: 121 GAQVYARTGQTATSSLVLRAGPLPQFTHSMFDHLSKLGLPLKLDKGVIVLLQDTTVCEAN 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
D L+ E A++LKL + A+F++ L W N
Sbjct: 181 DTLSAEAAQLLKLFGIQSAEFRIDLTAHWAN 211
>gi|328849725|gb|EGF98900.1| hypothetical protein MELLADRAFT_76009 [Melampsora larici-populina
98AG31]
Length = 234
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 132/225 (58%), Gaps = 10/225 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V L+KT KK E K L D+L A +++ ++F+V ++R + L+++R+ W
Sbjct: 1 MPKSKRATIVHLTKTTKKTKEAKGKLIDDLKAATDEFKYAWLFTVDHVRTTYLQEIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K +R F G+N VM ALG + E+E V+ L+G GLLFT+ V+ WFD +
Sbjct: 61 KPARIFLGRNAVMRLALGSTPENEHMPGTGVLGRLLEGDTGLLFTDEDPKVVIEWFDDFV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL--------PEF-PHSIEPQLRQLGLQTNLNKGVVTLFK 171
+D+A+ G ++TE VEL GP+ P P ++EP LR LGL T L +GV TL
Sbjct: 121 RDDYARKGNVATETVELPAGPVMIKEINDDPSVAPGAMEPHLRALGLPTTLQRGVPTLTS 180
Query: 172 DHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLY-LWYNKKEGTF 215
+ VC +G L+ +QA +LK L + AKFKV+L +W + T
Sbjct: 181 SYKVCSEGATLSTQQAGLLKTLGHQQAKFKVVLRNVWVKESSKTL 225
>gi|212529896|ref|XP_002145105.1| mRNA turnover protein MRT4 [Talaromyces marneffei ATCC 18224]
gi|210074503|gb|EEA28590.1| 60S acidic ribosomal protein P0, putative [Talaromyces marneffei
ATCC 18224]
Length = 246
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/246 (36%), Positives = 144/246 (58%), Gaps = 19/246 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR + V SKT KK E+ + L + + VE+Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPVSKRARLVHESKTSKKNHKEQTRRLFANIRECVEQYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ D R FFGK KVMA ALG + E +N+ ++ L G GLLFT+RS ++V+ + + +
Sbjct: 61 FSDGRLFFGKTKVMAVALGNTPETAFAQNLEKLNRFLTGAVGLLFTSRSPEEVITYLESF 120
Query: 120 EDEDFAKSGFISTEDVEL-------KEGPLP-----EFPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++T + + G +P H+IEP LR+LG+ T L KG V
Sbjct: 121 RPSDFARAGNVATRSFTIPNGVVYSRAGEIPTSEDDPISHTIEPALRKLGVPTRLIKGQV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
L K + VCK+G+ L Q +LK+ ++FK+ + ++++ G + +L++
Sbjct: 181 VLELLDGEKGYVVCKEGETLDSRQTTLLKMFGVATSEFKIDIKAQWDRETGEVK-ILEKP 239
Query: 223 KTPMDI 228
+ MD+
Sbjct: 240 EGAMDV 245
>gi|449702583|gb|EMD43196.1| 60S acidic ribosomal protein PO [Entamoeba histolytica KU27]
Length = 278
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 117/182 (64%), Gaps = 1/182 (0%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
E K L + +A +KY+ +F+F +R+ + +R DW+DS FFFG NKVM ALG++
Sbjct: 14 EIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGRT 73
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++DEI+ H ++ LKG CGL FTN+ K+++L +F +DFA+SG ++T D + EG
Sbjct: 74 EQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSVATMDFVVPEG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
PLP F S+E LR+ L L G+++ +++ VCKKG LTP+ AR+L+ KMA F
Sbjct: 134 PLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCKKGQKLTPQAARLLEYFDIKMAVF 192
Query: 201 KV 202
++
Sbjct: 193 EI 194
>gi|322707330|gb|EFY98909.1| 60S acidic ribosomal protein P0, putative [Metarhizium anisopliae
ARSEF 23]
Length = 273
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 130/224 (58%), Gaps = 26/224 (11%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERK----QNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDV 56
MPKSKR K L++ KK E+K QN+RD AV +Y + FVFSV NMRNS LK+V
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDKLFQNIRD----AVPEYQHCFVFSVDNMRNSYLKNV 56
Query: 57 RNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
R++ DSR FFGK K+MA ALG+S + + I ++ L G GLL TNR + +L +F
Sbjct: 57 RHELNDSRLFFGKTKLMAKALGQSPSEAVAPGIEDLTQYLSGTVGLLLTNRPAESILEYF 116
Query: 117 DVYEDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNK 164
+ + DFA++G S D + G + E P H+IEP+LR+L + T + K
Sbjct: 117 NNFAPVDFARAGVASPRDFTIPAGVVYATAGEVPVEHDVPLEHTIEPELRKLNVPTRMVK 176
Query: 165 GVVTL------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
G V L + + VCK+GDVL Q R+LKL +++FKV
Sbjct: 177 GRVVLGDESGQGEGYVVCKEGDVLDSRQTRLLKLFGVCVSEFKV 220
>gi|342184577|emb|CCC94059.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 224
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR V L+KT K E K L +++ A+E Y +++ + N+R L+ +R++
Sbjct: 1 MPKSKRSTVVPLTKTRSKTREEKDELINKIRDALEDYTDVYTLQLYNIRTKNLQQIRDER 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR F G NK++ +ALG+ + N++ + L G CGL FTN +V +F+
Sbjct: 61 RGDSRLFLGNNKILMFALGRDEASSQRTNLYKLGKYLTGSCGLFFTNLPAKEVKKYFEEV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
E +A++G ++T + L+ GPL +FPHS+ L +LGL L KGV+ L +D TVC+ G
Sbjct: 121 TAEVYARTGQVATCSLPLRAGPLTQFPHSMFDHLSRLGLPIKLEKGVIVLLRDTTVCEVG 180
Query: 180 DVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
+ L+ E A++LKL + A+FKV L W N
Sbjct: 181 ETLSAEAAQLLKLYGIQSAEFKVELTAHWAN 211
>gi|67471343|ref|XP_651623.1| 60S acidic ribosomal protein PO [Entamoeba histolytica HM-1:IMSS]
gi|167381456|ref|XP_001735725.1| mRNA turnover protein 4 mrt4 [Entamoeba dispar SAW760]
gi|56468387|gb|EAL46236.1| 60S acidic ribosomal protein PO, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165902154|gb|EDR28043.1| mRNA turnover protein 4 mrt4, putative [Entamoeba dispar SAW760]
gi|449707104|gb|EMD46821.1| 60S acidic ribosomal protein PO [Entamoeba histolytica KU27]
Length = 226
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 124/198 (62%), Gaps = 3/198 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
E K L + +A +KY+ +F+F +R+ + +R DW+DS FFFG NKVM ALG++
Sbjct: 14 EIKNRLITNIQEAAQKYSTVFIFYTPVLRSKFMNIIRKDWRDSIFFFGSNKVMQVALGRT 73
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++DEI+ H ++ LKG CGL FTN+ K+++L +F +DFA+SG I+T D + EG
Sbjct: 74 EQDEIKPGYHFIAERLKGTCGLCFTNKKKEEILAYFKTQIHDDFARSGSIATMDFVVPEG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
PLP F S+E LR+ L L G+++ +++ VC+KG L+P+ AR+L+ KMA F
Sbjct: 134 PLP-FEGSLELHLRKNLLPVELKDGILSCKEEYVVCRKGQKLSPQAARLLEYFDIKMAVF 192
Query: 201 KVLLYLWYNKKEGTFENL 218
++ + ++G FE L
Sbjct: 193 EIRVLSII--QDGKFEEL 208
>gi|85091761|ref|XP_959060.1| mRNA turnover protein MRT4 [Neurospora crassa OR74A]
gi|51316333|sp|Q7S302.1|MRT4_NEUCR RecName: Full=mRNA turnover protein 4 homolog
gi|28920457|gb|EAA29824.1| hypothetical protein NCU07547 [Neurospora crassa OR74A]
gi|336470128|gb|EGO58290.1| hypothetical protein NEUTE1DRAFT_82700 [Neurospora tetrasperma FGSC
2508]
gi|350290178|gb|EGZ71392.1| mRNA turnover protein 4 [Neurospora tetrasperma FGSC 2509]
Length = 252
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 131/236 (55%), Gaps = 18/236 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K+ L + + + + Y + FVFS+ NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+ A ALG + ED + +S L G GL+FTNR ++ +F
Sbjct: 61 NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLT 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T + + GPL E P H++EP+LR+LG+ T + KG V
Sbjct: 121 QVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D+ +CK+G+ L Q R+LKL +++F+V L +++ G L
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEVTEL 236
>gi|336268444|ref|XP_003348987.1| mRNA turnover protein MRT4 [Sordaria macrospora k-hell]
gi|380094247|emb|CCC08464.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 255
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 18/236 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K+ L + + +++ Y + FVFS+ NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVFNLTQVTKKNREQKEKLFENIRESIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+ A ALG + ED + +S L G GL+FTNR ++ +F
Sbjct: 61 NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLAGSVGLIFTNRDPQEIKDYFVNLT 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++T + + GPL E P H++EP+LR+LG+ T + KG V
Sbjct: 121 QVDFARAGSVATRTITIPSGPLFSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKVC 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D+ +CK+G+ L Q R+LKL +++F+V L +++ G L
Sbjct: 181 LGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSASSGEVTEL 236
>gi|221481027|gb|EEE19439.1| mRNA turnover protein 4 mrt4, putative [Toxoplasma gondii GT1]
Length = 228
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 133/228 (58%), Gaps = 9/228 (3%)
Query: 1 MPKSKRDKKVTLSKTVK-----KGLERKQNLRDELVKAVEKYN-NIFVFSVQNMRNSKLK 54
MP SKR K V+L+K K +G E K+ D + E+ N ++++ N RNS LK
Sbjct: 1 MPVSKRSKVVSLTKVKKQKCGGRGREVKEQWMDTIRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 DVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
VR+ K R F+GKNKV+ ALG + E NIH +S L G LL S D +
Sbjct: 61 LVRDLIKPGRVFYGKNKVIQRALGTTSTSECLPNIHKLSKKLTGHRALLVCEHSSDKLQT 120
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
+ ++FA++GF++TE ++LKEG L +FPHS+E + R LGL T L G + L D
Sbjct: 121 LLSKVQAKEFARAGFVATESIQLKEGFDALAQFPHSLEQRFRSLGLPTLLKDGKILLMGD 180
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLL 219
+TVC KG+ +TPEQA++LK L KMA+F + LL W+ + T ++ +
Sbjct: 181 YTVCTKGEPVTPEQAQVLKHLGVKMAEFHIKLLAEWHKGRYRTVDDTI 228
>gi|440302905|gb|ELP95211.1| mRNA turnover protein 4 mrt4, putative [Entamoeba invadens IP1]
Length = 224
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 144/230 (62%), Gaps = 12/230 (5%)
Query: 12 LSKTVKKGLERKQNLRDELV----KAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFF 66
+S+ +K + K+ ++D+L+ +A + Y N+F+F MRN+ +K++R+D DS FF
Sbjct: 1 MSRLQQKRKQPKREVKDKLISNIQEAAQNYPNLFLFYSPVMRNNFMKEIRHDRVDDSIFF 60
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
FG NKVM ALG++ +DE++ H+++ LKGQCGL FT SKD+++ +F + EDFAK
Sbjct: 61 FGSNKVMQVALGRTADDEVKVGAHLIAEILKGQCGLCFTKLSKDELMKYFKTQKKEDFAK 120
Query: 127 SGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQ 186
SGF + D + EGPL +FP S+E +LR L L GV+ ++ VCKKG LT +
Sbjct: 121 SGFTALSDFVVPEGPL-QFPGSMEVELRTQHLPVELKDGVLYNKDEYVVCKKGTQLTTQS 179
Query: 187 ARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMD-IYDMEDDE 235
A++LK KMA+F++ + + + G FE + E+ P + + ME+D+
Sbjct: 180 AQLLKHFGVKMAQFEIHIVAFL--ENGNFEKI---EEMPQNAVMQMEEDD 224
>gi|452845860|gb|EME47793.1| hypothetical protein DOTSEDRAFT_123992 [Dothistroma septosporum
NZE10]
Length = 243
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 126/224 (56%), Gaps = 20/224 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR + V S KK E+ L + A ++Y +IF FSV+NMRN+ LKDVR
Sbjct: 1 MPKSKRARVVHTSVVQKKASKEKSATLFAAVQAAADEYAHIFTFSVENMRNNYLKDVRQH 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG S EDE +H +S LKG GLL TNR+ ++L +F+ +
Sbjct: 61 FSDSRLFFGKTKVMAKALGTSPEDEHAPGLHKLSPHLKGNVGLLCTNRAPSEILEYFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------------PLPEFPHSIEPQLRQLGLQTNLNK 164
+ DFA++G ++ + G PL PH E +R+ G+ T L K
Sbjct: 121 VEVDFARAGTVADRTFTVPAGIVYSRAGEVSVEDDVPL---PHPQEVTVRKWGMPTRLEK 177
Query: 165 GVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
G V L +++ VC++G + Q +LKL MA+FKV +L W
Sbjct: 178 GKVMLDQEYVVCEEGKEMNSHQTALLKLFGVAMAEFKVQMLAYW 221
>gi|430811871|emb|CCJ30665.1| unnamed protein product [Pneumocystis jirovecii]
Length = 253
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 139/232 (59%), Gaps = 28/232 (12%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSK+ K ++L++T KKG E K+ L +++ ++KY I+VFSV+NM+N K+VR +W
Sbjct: 1 MPKSKKSKIISLTRTDKKGQEHKKKLFEDIRNCIDKYEYIWVFSVENMKNVHFKEVRREW 60
Query: 61 KDS---------------RFFFGKNKVMAYALGKSQEDEIEKNIH-VVSSALKGQCGLLF 104
K S RFF G+ +V+A +LG ++++E +N++ + L G G+LF
Sbjct: 61 KCSRLVKKNLNKWNQHSIRFFVGRLRVIAKSLGITKDEEYRENLNELAKQLLHGNVGVLF 120
Query: 105 TNRSKDDVLMWFDVYEDEDFAKSGFIS-------TEDVELKEGPLPE-----FPHSIEPQ 152
T+ S V+ +F + DFA+SGFIS + V + G +PE PH++EP
Sbjct: 121 TSESVPTVVDFFSKFSRMDFARSGFISPLTFIVPSGTVYSRGGQIPEESDTPLPHTLEPI 180
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
LR LG+ T L G +TLF ++T+CKKGDVL Q ++LK+ ++FK+ L
Sbjct: 181 LRNLGMPTLLKNGQITLFNEYTICKKGDVLDNRQTKLLKIFGIITSEFKIRL 232
>gi|346971278|gb|EGY14730.1| mRNA turnover protein [Verticillium dahliae VdLs.17]
Length = 247
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 21/239 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR++ + +++ KK E K L + +AV +Y + FVFSV NMRN+ LKDVR++
Sbjct: 1 MPKSKRNRLINMTQVSKKTREDKDKLFANIREAVPQYQHCFVFSVDNMRNNHLKDVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+M+ ALG+++E + ++ L G GLL TNR + +F+
Sbjct: 61 SDCRLFFGKTKLMSKALGQTRETALLDGTDRLTPHLSGTVGLLLTNRDPSAITAYFEGLS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G + + + +G L E P HSIEP+LR+LG+ T + +G +
Sbjct: 121 PVDFARAGTTAPREFAIPQGVLFATGGEVPREHDVPMEHSIEPELRRLGMPTRMVRGRIV 180
Query: 169 LFKD---------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L ++ + VCK+GDVL Q R+LKL M++F V L +++ G +L
Sbjct: 181 LGEEEPAEDAAPGYVVCKEGDVLDSRQTRLLKLFGICMSEFHVELIAYWSAATGEVTDL 239
>gi|108863910|gb|ABG22329.1| ribosomal protein L10 containing protein, expressed [Oryza sativa
Japonica Group]
Length = 185
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 48 MRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTN 106
MRN KLKD+R K S R F KVM ALG+S DE + +H +S L+G GL FTN
Sbjct: 1 MRNQKLKDLREQLKSSSRIFLAGKKVMQIALGRSSADEAKTGLHKLSKFLQGDTGLFFTN 60
Query: 107 RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
+DDV F +E+ DFA++G I TE VELKEGPL +F H +EP LR+ GL LNKG
Sbjct: 61 LPRDDVERLFREFEEHDFARTGSIVTETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGA 120
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
V L DH VC++G ++PE A+ L+LL +MA F++ L ++
Sbjct: 121 VELVADHIVCEEGKPISPEAAQTLRLLGMQMATFRLYLVCRWS 163
>gi|351722953|ref|NP_001235726.1| uncharacterized protein LOC100305462 [Glycine max]
gi|255625579|gb|ACU13134.1| unknown [Glycine max]
Length = 182
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 3/174 (1%)
Query: 48 MRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTN 106
MRN K K+ R+ K S RFF G NKVM ALG+S DEI +H VS L+G G++FTN
Sbjct: 1 MRNQKFKEFRDQLKSSSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMVFTN 60
Query: 107 RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
SK++V F +E+ DFA++G +TE V+LKEGPL +F H +EP LR+ G+ LNKGV
Sbjct: 61 LSKEEVERLFKEFEEYDFARTGSNATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGV 120
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
V L D VC++ L+PE +RIL+L+ KMA F++ L ++ E FE +D
Sbjct: 121 VELVSDFVVCEERKPLSPEASRILRLMGIKMATFRLSLICRWSPDE--FELYID 172
>gi|296816262|ref|XP_002848468.1| mRNA turnover protein MRT4 [Arthroderma otae CBS 113480]
gi|238841493|gb|EEQ31155.1| mRNA turnover protein 4 [Arthroderma otae CBS 113480]
Length = 244
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K V S+T+KK E+ + L + AV +Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVVHESRTLKKSHKEQTRRLYANVQAAVTEYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N+ ++ L G GLLFT+R VL +F+ +
Sbjct: 61 FADSRLFFGKTKVMAIALGTTPETAYAPNLDRLTPYLTGAVGLLFTSREPQSVLDYFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G IS + G + E P H++EP LR+L + T L KG V
Sbjct: 121 HPLDFARAGNISPRSFTIPSGVVYSRAGEIPAEDDEPISHTVEPTLRKLNVPTRLVKGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
TL D + VCK G+ L Q+ +LK+ +A+FKV + + K+ G
Sbjct: 181 TLEMDGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWVKESG 229
>gi|237831125|ref|XP_002364860.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211962524|gb|EEA97719.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221506977|gb|EEE32594.1| mRNA turnover protein 4 mrt4, putative [Toxoplasma gondii VEG]
Length = 228
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 9/228 (3%)
Query: 1 MPKSKRDKKVTLSKTVK-----KGLERKQNLRDELVKAVEKYN-NIFVFSVQNMRNSKLK 54
MP SKR K V+L+K K +G E K+ D + E+ N ++++ N RNS LK
Sbjct: 1 MPVSKRSKVVSLTKVKKQKCGGRGREVKEQWMDTIRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 DVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
VR+ K R F+GKNKV+ ALG + E NIH +S L G LL S + +
Sbjct: 61 LVRDLIKPGRVFYGKNKVIQRALGTTSTSECLPNIHKLSKKLTGHRALLVCEHSSEKLQT 120
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
+ ++FA++GF++TE ++LKEG L +FPHS+E + R LGL T L G + L D
Sbjct: 121 LLSKVQAKEFARAGFVATESIQLKEGFDALAQFPHSLEQRFRSLGLPTLLKDGKILLMGD 180
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLL 219
+TVC KG+ +TPEQA++LK L KMA+F + LL W+ + T ++ +
Sbjct: 181 YTVCTKGEPVTPEQAQVLKHLGVKMAEFHIKLLAEWHKGRYRTVDDTI 228
>gi|327292646|ref|XP_003231021.1| mRNA turnover protein MRT4 [Trichophyton rubrum CBS 118892]
gi|326466827|gb|EGD92280.1| 60S acidic ribosomal protein P0 [Trichophyton rubrum CBS 118892]
Length = 244
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 16/229 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K + S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++++S L G GLLFT+R VL +F+ +
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTPETAYAPNLNLLSPYLTGAVGLLFTSRDPQSVLDFFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G I+ + G + E P H+IEP LR+L + T L KG V
Sbjct: 121 HPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVKGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK G+ L Q+ +LK+ +A+FKV + + KK G
Sbjct: 181 MLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSG 229
>gi|358377876|gb|EHK15559.1| hypothetical protein TRIVIDRAFT_56356 [Trichoderma virens Gv29-8]
Length = 248
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 130/226 (57%), Gaps = 19/226 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K L + + V +Y + FVF+V NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDQLFQNIREQVPEYQHCFVFNVDNMRNNYLKDVRREL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+MA ALG++ E+ I I ++ + G GLL TNR D VL + +
Sbjct: 61 SDSRLFFGKTKLMAKALGQTAEEAIVPGIEGLAPHITGTVGLLLTNRPVDSVLDYLNSIA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + G + E P H+IEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGVTASRSFTIPPGVVYATGGEVPKENDIPLQHTIEPELRRLGVPTRMVKGKVV 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
L + +TVCK+G+VL Q R+LKL +++F+V +L W
Sbjct: 181 LGDESGEGEGYTVCKEGEVLDSRQTRLLKLFDVCLSEFRVKVLAYW 226
>gi|425767064|gb|EKV05647.1| 60S acidic ribosomal protein P0, putative [Penicillium digitatum
Pd1]
gi|425780250|gb|EKV18265.1| 60S acidic ribosomal protein P0, putative [Penicillium digitatum
PHI26]
Length = 246
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 134/231 (58%), Gaps = 18/231 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + +E+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTTKKDHKEQTRRLFANIRECIEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVM ALG E E N+ ++ L G GLLFT+R+ + V+ +F+ +
Sbjct: 61 FGDSRVFFGKTKVMGKALGTDVESEAAPNVRKLTPFLAGAVGLLFTSRTPESVIEYFENF 120
Query: 120 EDEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVV 167
+DFA++G +T V + G +P H+IEP LR+LG+ T L KG V
Sbjct: 121 RPQDFARAGTEATRSFTIPNGLVTARGGEIPAEQDEPVSHTIEPALRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK+G+ L Q +LK+ ++FKV L ++ + G
Sbjct: 181 MLELTEGQEGYPVCKEGETLDSRQTTLLKMFGITSSEFKVDLKAYWTRSTG 231
>gi|119174820|ref|XP_001239738.1| mRNA turnover protein MRT4 [Coccidioides immitis RS]
gi|303314547|ref|XP_003067282.1| mRNA turnover protein MRT4 [Coccidioides posadasii C735 delta
SOWgp]
gi|240106950|gb|EER25137.1| ribosomal protein L10 containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037588|gb|EFW19525.1| 60S acidic ribosomal protein P0 [Coccidioides posadasii str.
Silveira]
gi|392869930|gb|EAS28471.2| 60S acidic ribosomal protein P0 [Coccidioides immitis RS]
Length = 244
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 132/234 (56%), Gaps = 16/234 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K V SK KK E+ + L + +AV Y+++FVFSV NMRN+ LKDVR +
Sbjct: 1 MPVSKRAKIVHESKVTKKSHKEQTRRLYANVQEAVSNYDHLFVFSVDNMRNTYLKDVRTE 60
Query: 60 W-KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
+ +D R FFGK KVMA ALG + E N+ +S L G GLLFT+RS VL +F
Sbjct: 61 FSEDGRLFFGKTKVMAVALGTNPETAFAPNLDKLSPYLNGAVGLLFTSRSPKSVLDYFSS 120
Query: 119 YEDEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGV 166
+ DFA++G +S V G +PE H+IEP LR+LG+ T L +G
Sbjct: 121 FHPMDFARAGNVSPRAFTIPSGIVYAHAGEIPEEHDQPISHTIEPTLRKLGVPTRLVRGK 180
Query: 167 VTLFKD--HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
VTL + + VCK G+ L Q +LK+ +A+F+V + + K+ G E L
Sbjct: 181 VTLDMEGGYQVCKAGETLDSRQTTLLKMFGVAVAEFRVEMRAHWTKETGEVEVL 234
>gi|398406853|ref|XP_003854892.1| hypothetical protein MYCGRDRAFT_99074 [Zymoseptoria tritici IPO323]
gi|339474776|gb|EGP89868.1| hypothetical protein MYCGRDRAFT_99074 [Zymoseptoria tritici IPO323]
Length = 241
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 128/222 (57%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR + V S KK E+ L + + A + Y +IFVF V+NMRN+ LKDVR
Sbjct: 1 MPKSKRSRVVHTSVVQKKPSKEKALALFEAVQHAADSYAHIFVFDVENMRNTYLKDVRQQ 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG+++E E + ++ LKG GLL TNR+ +VL +F+ Y
Sbjct: 61 FSDSRIFFGKTKVMAKALGQTRETEHAPGLWKLNQYLKGSVGLLCTNRAPAEVLQYFEGY 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGVV 167
+ DFA++G ++ + G + PHS+E +R+ G+ T L KG V
Sbjct: 121 VEVDFARAGTEASRTFTIPAGVVYSRGGEEAIEDDVALPHSLEVTVRKWGMPTRLEKGKV 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L ++HTVC++G L Q +LKL A+FKV + +++
Sbjct: 181 MLDQEHTVCQEGKELNSHQTALLKLFGVATAEFKVEVQAYWS 222
>gi|302497285|ref|XP_003010643.1| hypothetical protein ARB_03344 [Arthroderma benhamiae CBS 112371]
gi|291174186|gb|EFE30003.1| hypothetical protein ARB_03344 [Arthroderma benhamiae CBS 112371]
Length = 244
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K + S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++ +S L G GLLFT+R VL +F+ +
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTPETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G I+ + G + E P H+IEP LR+L + T L KG V
Sbjct: 121 HPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVKGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK G+ L Q+ +LK+ +A+FKV + + KK G
Sbjct: 181 MLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSG 229
>gi|255953299|ref|XP_002567402.1| Pc21g03380 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589113|emb|CAP95235.1| Pc21g03380 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 246
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 133/228 (58%), Gaps = 18/228 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR + V SKT KK E+ + L + + +E+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPRSKRARVVHESKTAKKDHKEQTRRLFANIRECIEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVM ALG E E N+ ++ L G GLLFT+R+ + V+ +F+ +
Sbjct: 61 FADSRVFFGKTKVMGKALGTDVESEAAPNLRKLTPFLAGAVGLLFTSRTPESVIEYFETF 120
Query: 120 EDEDFAKSGFISTED-------VELKEGPLPE-----FPHSIEPQLRQLGLQTNLNKGVV 167
+DFA++G +T V + G +P H+IEP LR+LG+ T L KG V
Sbjct: 121 RPQDFARAGTEATRSFTIPNGLVTARAGEIPAEQDEPVSHTIEPALRKLGVPTRLVKGKV 180
Query: 168 TL-----FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
L + + VCK+G+ L Q ++K+ ++FKV L ++ +
Sbjct: 181 MLELTEGQEGYPVCKEGETLDSRQTTLMKMFGITSSEFKVDLKAYWTR 228
>gi|145355177|ref|XP_001421843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582082|gb|ABP00137.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 255
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 133/210 (63%), Gaps = 6/210 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L++T KK E K L + + A+ + ++++VF +NMRN K++R
Sbjct: 1 MPKSKRAKVVSLTQTKKKDREWKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAAT 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ + FF G NKV+ ALG+ E E + + + +KG CG++FTN S++DV F+ +
Sbjct: 61 EATTTFFVGSNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL--PE---FPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+D+A++G ++ E V ++ GP+ P H++EP LR+ G+ T LN+GV+ L +HT
Sbjct: 121 AVKDYARTGALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIELEANHT 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
+CK+G ++P+ A +L+L ++A+F+ L
Sbjct: 181 LCKEGQHISPQGAILLRLFGHELAEFRCRL 210
>gi|358391968|gb|EHK41372.1| hypothetical protein TRIATDRAFT_127105 [Trichoderma atroviride IMI
206040]
Length = 248
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 134/230 (58%), Gaps = 27/230 (11%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERK----QNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDV 56
MPKSKR K V L++ KK E+K QN+RD+ V +Y + VF+V NMRN+ LK+V
Sbjct: 1 MPKSKRAKVVHLTQVSKKTREQKDQLFQNIRDQ----VPEYQHCIVFNVDNMRNNYLKEV 56
Query: 57 RNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
R + DSR FFGK K+MA ALG++ E+ I I ++ + G GLL TNR +DVL +
Sbjct: 57 RRELNDSRLFFGKTKLMAKALGQTPEEAILPGIEGLAPHIAGTVGLLLTNRPVNDVLDYL 116
Query: 117 DVYEDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNK 164
+ DFA++G ++ + G + E P H+IEP+LR+LG+ T + K
Sbjct: 117 NGIVSVDFARAGVTASRSFIIPPGVVYATGGEVPKENDIPLGHTIEPELRRLGIPTRMVK 176
Query: 165 GVVTL------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
G V L + +TVCK+GDVL Q R+LKL +++FK+ +L W
Sbjct: 177 GKVVLGEENGEGEGYTVCKEGDVLDSRQTRLLKLFDVCLSEFKIKVLAYW 226
>gi|307207599|gb|EFN85263.1| mRNA turnover protein 4-like protein [Harpegnathos saltator]
Length = 143
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
++GQCGLLFTNRSK V+ W + YE+ ++A++GF++ +EL EGPLP+F HS+EPQLRQ
Sbjct: 1 MRGQCGLLFTNRSKKQVIEWANGYEELEYARAGFVAPYSIELPEGPLPQFQHSMEPQLRQ 60
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTF 215
LG+ T L KG++TL K + VC++ DVLT EQ +ILKLL K +A FK+LL Y KK G F
Sbjct: 61 LGMPTALQKGIITLIKPYKVCQESDVLTSEQTQILKLLDKPLATFKLLLLGLYTKKHG-F 119
Query: 216 ENLLDREKTPMDIYDMEDDENN 237
+ L + T + +M+ ++NN
Sbjct: 120 KKLAVSQDTKENDEEMDMEKNN 141
>gi|326480342|gb|EGE04352.1| mRNA turnover protein 4 [Trichophyton equinum CBS 127.97]
Length = 244
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 16/229 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K + S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++ +S L G GLLFT+R VL +F+ +
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTPETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G I+ + G + E P H+IEP LR+L + T L KG V
Sbjct: 121 HPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPLSHTIEPTLRKLNVPTRLVKGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK G+ L Q+ +LK+ +A+FKV + + K+ G
Sbjct: 181 MLEMEGDGYRVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKESG 229
>gi|315042125|ref|XP_003170439.1| mRNA turnover protein MRT4 [Arthroderma gypseum CBS 118893]
gi|311345473|gb|EFR04676.1| mRNA turnover protein 4 [Arthroderma gypseum CBS 118893]
Length = 244
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 136/243 (55%), Gaps = 16/243 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K V S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVVHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ D R FFGK KVMA ALG + E N+ +S L G GLLFT+R VL +F+ +
Sbjct: 61 FSDGRLFFGKTKVMAIALGTTPETACAPNLERLSRYLTGAVGLLFTSREPQSVLDFFESF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++ + G + E P H+IEP LR+L + T L KG V
Sbjct: 121 HPIDFARAGNVTPRAFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVKGKV 180
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
L + + VCK G+ L Q+ +LK+ +A+FKV + + KK G L ++E
Sbjct: 181 MLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSGEVVVLENQETM 240
Query: 225 PMD 227
+D
Sbjct: 241 EVD 243
>gi|302666782|ref|XP_003024987.1| hypothetical protein TRV_00849 [Trichophyton verrucosum HKI 0517]
gi|291189066|gb|EFE44376.1| hypothetical protein TRV_00849 [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 131/229 (57%), Gaps = 16/229 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K + S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 34 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 93
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ D R FFGK KVMA ALG + E N++ +S L G GLLFT+R VL +F+ +
Sbjct: 94 FSDGRLFFGKTKVMAIALGTTPETAYAPNLNRLSPYLTGAVGLLFTSRDPQSVLDFFESF 153
Query: 120 EDEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVV 167
DFA++G I+ + G + E P H+IEP LR+L + T L KG V
Sbjct: 154 HPIDFARAGNITPRSFTIPSGVVYSRAGEIPAEDDEPISHTIEPTLRKLNVPTRLVKGKV 213
Query: 168 TLFKD---HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
L + + VCK G+ L Q+ +LK+ +A+FKV + + KK G
Sbjct: 214 MLEMEGDGYQVCKAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKKSG 262
>gi|449284885|gb|EMC90752.1| mRNA turnover protein 4 like protein, partial [Columba livia]
Length = 131
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 95/128 (74%)
Query: 92 VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
VS L+G+ GLLFTNR+KD+V WF +++ DFA++G +T V L GPL +FPHS+EP
Sbjct: 2 VSKHLRGEVGLLFTNRTKDEVDEWFSKFKEVDFARAGNKATYTVSLDTGPLEQFPHSMEP 61
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
QLRQLGL T L KGVVTL D+ VCK+GDVLTPEQAR+LKL +MA+FKV + +N +
Sbjct: 62 QLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKFLWNSE 121
Query: 212 EGTFENLL 219
G F+ L+
Sbjct: 122 TGDFQKLV 129
>gi|449301834|gb|EMC97843.1| hypothetical protein BAUCODRAFT_31850 [Baudoinia compniacensis UAMH
10762]
Length = 246
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 127/222 (57%), Gaps = 15/222 (6%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR + V S KK E+ +L + A + + +IFVFSV NMRN+ LKDVR
Sbjct: 1 MPKSKRARVVHTSVVQKKPSKEKSASLYSAIRAAADNFAHIFVFSVANMRNTYLKDVRQH 60
Query: 60 WK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
+ D R FFGK KVMA ALG S EDE + +S LKG G+L TNR+ +VL +F+
Sbjct: 61 FALDGRLFFGKTKVMAKALGSSAEDEHAPGLAKLSGYLKGSVGILCTNRAPKEVLEFFEG 120
Query: 119 YEDEDFAKSGFISTEDVEL-------KEGPLP-----EFPHSIEPQLRQLGLQTNLNKGV 166
Y + D+A++G ++ + + G LP PHS+E +R+ G+ T L KG
Sbjct: 121 YVEVDYARAGVTASRTFTIPAGVVYSRGGELPVEDDVPLPHSLEVMVRKWGMPTRLEKGR 180
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
V L +++TV ++G L Q +LKL MA+FKV +L W
Sbjct: 181 VMLDQEYTVAEEGRELNSHQTALLKLFGVAMAEFKVQVLAYW 222
>gi|224014312|ref|XP_002296819.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968674|gb|EED87020.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 220
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKS+R ++V L+KT KK E K N D + A++ + +++FS +NMR++ KDVR +
Sbjct: 1 MPKSRRAQRVALTKTAKKTREHKSNYVDTVRSAIDSNDRLYLFSYENMRSNHFKDVRLHF 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ R F GKNK++ ALG+S EDE N+H +S L G G+L T++S DV +F
Sbjct: 61 R-GRLFLGKNKLLQIALGRSSEDEYSDNLHQLSKILSGSVGILCTSQSPKDVESYFANLA 119
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLF---KDHTVCK 177
EDFA++G + + V L + + P S+ Q R+LGL + G V ++ VCK
Sbjct: 120 VEDFARAGQTAPQTVMLSQSQIETHPVSMVEQFRKLGLPVEVKNGRVAFVGGREEWEVCK 179
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
+G L+ EQ +IL + K+A F++ L + K+EGT E
Sbjct: 180 EGKELSVEQCKILTHMGLKLAVFRIELVCRWEKEEGTVE 218
>gi|339265019|ref|XP_003366366.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
gi|316962994|gb|EFV48858.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
Length = 207
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 20/213 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKRDK+V+L+ KKG E K+ L DE+ + ++ Y +I VFSV++ R +++ VR+ +
Sbjct: 1 MPRSKRDKEVSLTVVKKKGREGKEKLVDEVRRCIDAYKSILVFSVESFRTAQMNQVRHVF 60
Query: 61 KD-SR--FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFD 117
K+ SR FFFG+NKV+A ALG+ +E +N+ +SS L R+ +++ F
Sbjct: 61 KENSRWVFFFGRNKVLAIALGRIPSEEYRENLCKLSSVL---------VRTAVEIVHAFA 111
Query: 118 VY--------EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTL 169
E +FA+SG +TE + + GPL +F +IEP LR+LGL L KGV+ +
Sbjct: 112 ALLCRNLKKLEQPEFARSGNKATETITIPAGPLEQFQFTIEPLLRKLGLPVTLEKGVIIM 171
Query: 170 FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
KD VCKK VLTPEQA+IL+L K+AKFK+
Sbjct: 172 EKDFVVCKKDCVLTPEQAKILELFGIKLAKFKL 204
>gi|296422012|ref|XP_002840557.1| mRNA turnover protein MRT4 [Tuber melanosporum Mel28]
gi|295636775|emb|CAZ84748.1| unnamed protein product [Tuber melanosporum]
Length = 236
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 13/215 (6%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP+SKR K V+L+KT K+ G E + L ++ ++++++ +FVFSV NMRN+ LK+VR D
Sbjct: 1 MPRSKRSKVVSLTKTDKRPGRENNERLYGKIRESIDEHQIVFVFSVDNMRNTHLKEVRTD 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG S DE N+ +S L G GLL T+R ++VL +F+ +
Sbjct: 61 FSDSRIFFGKTKVMAKALGTSASDEYRLNLSSLSKHLTGNVGLLITSRPAEEVLTYFESF 120
Query: 120 EDEDFAK------------SGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVV 167
+D+A+ +G + + L++ HS+E +R LG+ T L G V
Sbjct: 121 SKQDYARMNAVSPITFIVPAGVVYSSGGSLQQEEDVPMAHSLETTVRGLGMPTRLVNGKV 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
L ++ VCK+G L +QA +LK+ A+F +
Sbjct: 181 HLDQEFVVCKEGKKLDSKQATLLKIFGIPTAEFVI 215
>gi|307104711|gb|EFN52963.1| hypothetical protein CHLNCDRAFT_58680 [Chlorella variabilis]
Length = 250
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 6/213 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V L+K KK K+ L + + V++Y +I++F +N RN + K++R
Sbjct: 1 MPKSKRNKLVALTKVKKKDKSWKEGLINTVRAYVDEYPSIYLFKFENFRNEQFKELREQH 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
++ SRF G NKV+ ALG DE N+ ++ ++G GL FT + +V F+ +
Sbjct: 61 RNTSRFCMGSNKVLRVALGHDAADEYRTNLCQLAGRIRGSAGLFFTKLPRGEVEAIFEGF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEF----PHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175
E D+A++G +TED L+ GPL + H++EP LRQ GL T LNKGVV L D V
Sbjct: 121 EVVDYARAGARATEDFSLEAGPLTLYGEPLAHTLEPTLRQHGLPTKLNKGVVELVADFAV 180
Query: 176 CKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
CK+G L QA +L++ K A FK+ LL +W
Sbjct: 181 CKEGQKLKSNQAALLRMFDIKQASFKMQLLAVW 213
>gi|308813045|ref|XP_003083829.1| Protein involved in mRNA turnover (ISS) [Ostreococcus tauri]
gi|116055711|emb|CAL57796.1| Protein involved in mRNA turnover (ISS) [Ostreococcus tauri]
Length = 254
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 127/210 (60%), Gaps = 6/210 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + V+L+KT KK E K ++ D A+E + +VF MRN K++R
Sbjct: 1 MPKSKRARVVSLTKTKKKDREWKSSIIDRARDALELRASAYVFKYTCMRNGTFKEMRQAC 60
Query: 61 KDSR-FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+++ FF G N V+ ALGK E E ++N + ++G CG++FT+ SK+DV FD +
Sbjct: 61 EETTTFFVGSNAVLRVALGKDSESESKENASELGKRVRGDCGVMFTDLSKEDVEATFDRF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL--PE---FPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
D+A++G ++ E V + GP+ P H++EP LR+ G+ T LN+GV+ L DH
Sbjct: 121 AVSDYARTGQVAGETVTVPAGPVRGPSGALMEHTLEPTLRKNGMPTRLNRGVIELEADHV 180
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
+C++G ++P+ A +LK+ ++A+F+ L
Sbjct: 181 LCRQGQHISPQGAILLKMFGHELAEFRCRL 210
>gi|340518499|gb|EGR48740.1| hypothetical protein TRIREDRAFT_107335 [Trichoderma reesei QM6a]
Length = 248
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 18/220 (8%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K L + + V +Y + VF+V NMRN+ LKDVR +
Sbjct: 1 MPKSKRAKVFHLTQVTKKTREQKDQLFQNIREQVPEYQHCIVFNVDNMRNNYLKDVRREL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
DSR FFGK K+MA ALG++ E+ I I ++ + G GLL TNR D VL +
Sbjct: 61 SDSRLFFGKTKLMAKALGQTAEEAIVPGIEGLAPHITGTVGLLLTNRPVDSVLDYLSGIA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G ++ + G + E P H+IEP+LR+LG+ T + KG V
Sbjct: 121 PVDFARAGVAASRSFTIPPGVVYATAGEVPKENDVPLTHTIEPELRRLGVPTRMVKGKVV 180
Query: 169 L------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
L + + VCK+G++L Q R+LKL +++F++
Sbjct: 181 LGDENGEGEGYVVCKEGEILDSRQTRLLKLFDVCLSEFRI 220
>gi|444722470|gb|ELW63162.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 162
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 99/145 (68%)
Query: 76 ALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDV 135
ALG+S DE + N+H VS L+G+ GLLFT+R+K+++ WF + + D+ + G + V
Sbjct: 3 ALGRSPGDEYKDNLHQVSKKLRGEVGLLFTSRTKEEMNDWFTNHTEMDYGRPGNKAAFTV 62
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
L GPL + PHS+EPQLRQLGL T L + VVTL D+ VCK GDVLT EQARILKLL
Sbjct: 63 SLDPGPLEQLPHSLEPQLRQLGLPTALRRCVVTLLSDYEVCKAGDVLTSEQARILKLLGY 122
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+MA+F+V + ++ + G F+ + D
Sbjct: 123 EMAEFRVTMKYMWDAQSGRFQQVGD 147
>gi|410927092|ref|XP_003977000.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Takifugu
rubripes]
Length = 108
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 84/108 (77%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KTVKKGLE KQ L EL + V+ Y N+F+FSV NMRNSK+KD+R W
Sbjct: 1 MPKSKRDKKISLTKTVKKGLEVKQKLITELRQCVDTYRNLFIFSVANMRNSKIKDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRS 108
K SRFFFGKNKVM ALGK DE N+H VS L+G+ GLLFTN++
Sbjct: 61 KHSRFFFGKNKVMIIALGKGDTDEYRDNLHKVSKQLRGEVGLLFTNKT 108
>gi|253747524|gb|EET02162.1| Acidic ribosomal protein P0 [Giardia intestinalis ATCC 50581]
Length = 241
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 126/216 (58%), Gaps = 4/216 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V L+K KK E KQ + ++ +A + Y+ ++V NM +S + +R
Sbjct: 1 MPRSKRSKTVVLTKVEKKTREAKQEIIKQIREAFDIYDTVYVIDSHNMNSSSWQQLRTAM 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
KD +R F GKN++M YALGK++E+ + LKG GLLFT+ ++ V
Sbjct: 61 KDYARIFMGKNQLMRYALGKTEEESYRSKTWQLGRLLKGMTGLLFTSAPEEKVRSALASA 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLP--EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
A+ G ++T+ + + +GPL ++ ++EP+LR+LGL T+L V+ + DH +CK
Sbjct: 121 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLY-LWYNKKE 212
+GD+LT QAR+LK L +++ V + +W+ E
Sbjct: 181 EGDILTSAQARLLKHLDHVLSESSVTIRGVWHKATE 216
>gi|159111538|ref|XP_001706000.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
gi|157434092|gb|EDO78326.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
Length = 251
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 139/247 (56%), Gaps = 10/247 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V L+K KK E KQ + ++ +A + Y+ ++V NM +S + +R
Sbjct: 11 MPRSKRSKTVVLAKVEKKTREAKQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSM 70
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +R F GKN++M YALGK++E+ + LKG GLLFT+ ++ V
Sbjct: 71 KGYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASV 130
Query: 120 EDEDFAKSGFISTEDVELKEGPLP--EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
A+ G ++T+ + + +GPL ++ ++EP+LR+LGL T+L V+ + DH +CK
Sbjct: 131 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 190
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLY-LWYNKKEGTFENLLDREKTPMDIYDMEDDEN 236
+GDVLT QAR+LK +++ V L +W+ + E ++LD P +Y ++
Sbjct: 191 EGDVLTSAQARLLKHFDHVLSESSVTLRGVWHKETEDL--DVLD----PNCLYLLDTAPA 244
Query: 237 NSNEESD 243
+E+SD
Sbjct: 245 EEDEQSD 251
>gi|392342210|ref|XP_003754532.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog
[Rattus norvegicus]
Length = 186
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 117/220 (53%), Gaps = 65/220 (29%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
+PKSK DKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRN+KLKD+RN W
Sbjct: 12 IPKSKGDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNAKLKDIRNAW 71
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGKNKVM ALG S DE + N+H VS L +D+V
Sbjct: 72 KHSQMFFGKNKVMMVALGCSPSDEYKDNLHQVSKXL------------RDEV-------- 111
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
GF+ST +N+ CK+GD
Sbjct: 112 -------GFLST---------------------------NRMNE-----------CKEGD 126
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+LTPEQAR+LKL ++A+FKV + ++ G F+ + D
Sbjct: 127 MLTPEQARVLKLFGYEVAEFKVTIKYMWDSHSGRFQQMAD 166
>gi|302410871|ref|XP_003003269.1| mRNA turnover protein MRT4 [Verticillium albo-atrum VaMs.102]
gi|261358293|gb|EEY20721.1| mRNA turnover protein [Verticillium albo-atrum VaMs.102]
Length = 237
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 121/220 (55%), Gaps = 23/220 (10%)
Query: 22 RKQNLR--DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGK 79
R+Q R +AV +Y + FVFSV NMRN+ LKDVR++ D R FFGK K+M+ ALG+
Sbjct: 10 RRQGTRLFRPTFEAVPQYQHCFVFSVDNMRNNHLKDVRHELSDCRLFFGKTKLMSKALGQ 69
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++E + ++ L G GLL TNR + +F+ DFA++G + + + +
Sbjct: 70 TRETALLDGTDRLTPHLSGTVGLLLTNRDPSAITTYFEGLSPVDFARAGTTAPREFAIPQ 129
Query: 140 GPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVTLFKD---------HTVCKK 178
G L E P HSIEP+LR+LG+ T + +G + L ++ + VCK+
Sbjct: 130 GVLFATGGEVPREHDVPMEHSIEPELRRLGMPTRMVRGRIVLGEEEPTEDAAPGYVVCKE 189
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
GDVL Q R+LKL M++F+V L +++ G +L
Sbjct: 190 GDVLDSRQTRLLKLFGICMSEFRVELIAYWSAATGEVTDL 229
>gi|238594987|ref|XP_002393638.1| hypothetical protein MPER_06598 [Moniliophthora perniciosa FA553]
gi|215461421|gb|EEB94568.1| hypothetical protein MPER_06598 [Moniliophthora perniciosa FA553]
Length = 243
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 137/254 (53%), Gaps = 25/254 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K V+L+K KK K+ + + +++ ++F V RN L+ VR W
Sbjct: 1 MPKSKRSKLVSLTKVEKKDRSHKEAQIKLIPENADQWKYCWLFEVAAYRNGHLQTVRKLW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K + +GK+ + G+ + IH ++ ++GQ GLLFT+ +V+ WF +
Sbjct: 61 KGT---YGKS-IRDNTGGRHR-----MGIHKLAQQIEGQVGLLFTDTEPREVIDWFTDFH 111
Query: 121 DEDFAKSGFISTEDVELKEGPL-------PE-FPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
DFA++G ++ V L GP+ PE FPH+ EPQLR+LGL T +N+GV TL
Sbjct: 112 PPDFARAGNVAPRTVILPAGPVMQHHSDPPEPFPHNEEPQLRKLGLSTKMNRGVPTLEVP 171
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENLLDREKTPMD---- 227
H +C+KG LT EQA++LKL+ +KM FKV LL W G +D + P D
Sbjct: 172 HKLCEKGKTLTAEQAQLLKLIGEKMVTFKVGLLARWEAATGGVV--TMDGPRLPTDGQAE 229
Query: 228 -IYDMEDDENNSNE 240
+ D E ++ NE
Sbjct: 230 SVSDEEKEDTEMNE 243
>gi|308158269|gb|EFO61034.1| Acidic ribosomal protein P0 [Giardia lamblia P15]
Length = 241
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 127/216 (58%), Gaps = 4/216 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K V L+K KK E KQ + ++ +A +KY+ ++V NM +S + +R
Sbjct: 1 MPRSKRSKTVVLAKVEKKTREAKQEIIKQIREAFDKYDTVYVIDSHNMNSSSWQQLRMIM 60
Query: 61 KD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K+ +R F GKN++M YALGK++E+ + LKG GLLFT+ ++ V
Sbjct: 61 KEYARIFMGKNQLMRYALGKTEEESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASV 120
Query: 120 EDEDFAKSGFISTEDVELKEGPLP--EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
A+ G ++T+ + + +GPL ++ ++EP+LR+LGL T+L V+ + DH +CK
Sbjct: 121 ARPCLARGGDVATKTIVIPQGPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCDHVLCK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLY-LWYNKKE 212
+GD+LT QAR+LK +++ V L +W+ + E
Sbjct: 181 EGDILTSAQARLLKHFDHVLSESSVTLRGVWHKETE 216
>gi|392350475|ref|XP_003750667.1| PREDICTED: LOW QUALITY PROTEIN: mRNA turnover protein 4 homolog,
partial [Rattus norvegicus]
Length = 176
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 117/220 (53%), Gaps = 65/220 (29%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
+PKSK DKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRN+KLKD+RN W
Sbjct: 2 IPKSKGDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNAKLKDIRNAW 61
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
K S+ FFGKNKVM ALG S DE + N+H VS L +D+V
Sbjct: 62 KHSQMFFGKNKVMMVALGCSPSDEYKDNLHQVSKXL------------RDEV-------- 101
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
GF+ST +N+ CK+GD
Sbjct: 102 -------GFLST---------------------------NRMNE-----------CKEGD 116
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+LTPEQAR+LKL ++A+FKV + ++ G F+ + D
Sbjct: 117 MLTPEQARVLKLFGYEVAEFKVTIKYMWDSHSGRFQQMAD 156
>gi|326473435|gb|EGD97444.1| 60S acidic ribosomal protein P0 [Trichophyton tonsurans CBS 112818]
Length = 215
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 131/231 (56%), Gaps = 21/231 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MP SKR K + S+T KK E+ + L + AVE+Y+++FVF+V NMRN+ LKDVR +
Sbjct: 1 MPISKRAKVIHESRTQKKSHKEQTRRLYANVQAAVEEYDHLFVFAVDNMRNTYLKDVRTE 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ DSR FFGK KVMA ALG + E N++ +S L G GLLFT+R V+
Sbjct: 61 FSDSRLFFGKTKVMAIALGTTPETAYAPNLNRLSPYLTGAVGLLFTSRDPHGVV------ 114
Query: 120 EDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD---HTVC 176
++++G I ED E PL H+IEP LR+L + T L KG V L + + VC
Sbjct: 115 ----YSRAGEIPAEDDE----PL---SHTIEPTLRKLNVPTRLVKGKVMLEMEGDGYQVC 163
Query: 177 KKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMD 227
K G+ L Q+ +LK+ +A+FKV + + K+ G L +E +D
Sbjct: 164 KAGEELDSRQSTLLKMFGVAVAEFKVEMKARWEKESGEVVVLEKKETMEVD 214
>gi|452985818|gb|EME85574.1| hypothetical protein MYCFIDRAFT_41035 [Pseudocercospora fijiensis
CIRAD86]
Length = 239
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 14/223 (6%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR K + S KK E ++ L + A + Y +IFVF V NMRN+ +K+VR +
Sbjct: 1 MPKSKRAKIIHTSNVQKKPSKEVREALYTAVQSACDTYAHIFVFDVSNMRNTYIKNVRQE 60
Query: 60 WK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDV 118
+ D R F+GK KVMA ALG EDE + ++ L+G GLL TNR+ +VL + +
Sbjct: 61 FSSDGRIFYGKTKVMAKALGSGPEDECAPGLAKLAKYLQGNVGLLCTNRAPSEVLEYLEN 120
Query: 119 YEDEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLRQLGLQTNLNKGV 166
Y + DFA++G ++ + +G + PHS+E +R+ G+ T L KG
Sbjct: 121 YVEVDFARAGVVANRGFVVPKGVVYSRGGEVAEEDDVALPHSLEVMVRKWGMPTRLEKGK 180
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
V L ++ VC++G L Q +LKL +A+FKV + +++
Sbjct: 181 VVLDQEFVVCEEGQELNSHQTALLKLFGVAIAEFKVHVKAYWS 223
>gi|397634608|gb|EJK71504.1| hypothetical protein THAOC_07047 [Thalassiosira oceanica]
Length = 240
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 22/238 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K+V L++T KK E K N + + +A++ + I++FS +NMR++ KDVR +
Sbjct: 1 MPKSKREKRVALTQTAKKTREHKTNYVETVREAIDGNDRIYLFSYENMRSNHFKDVRLHF 60
Query: 61 K-------------------DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCG 101
+ + R F GKNK++ ALG++ EDE N+H VS L G G
Sbjct: 61 RGGNKNDDIMTDDGDGDSSGEGRIFLGKNKLLQIALGRTPEDEYSDNLHQVSKNLTGSVG 120
Query: 102 LLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTN 161
+L T +S DDV +F D+A++G +S + V L + + P S+ R+LGL
Sbjct: 121 ILCTTQSADDVEEYFSSLSVVDYARAGVLSPQTVRLTQKQVETHPVSMVELFRKLGLPVE 180
Query: 162 LNKGVVTLFKDHT---VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
+ G V+ + VCK+G L+ EQ +IL K++ FK+ L + K +G+ E
Sbjct: 181 VKNGRVSFIGERPEFEVCKEGKELSVEQCKILVHFGIKLSTFKISLVSRWEKSDGSVE 238
>gi|320586805|gb|EFW99468.1| 60S acidic ribosomal protein [Grosmannia clavigera kw1407]
Length = 279
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 29/247 (11%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K + L++ KK E K L + AV +Y + FV V+NMRN L ++R +
Sbjct: 1 MPKSKREKLLHLTQVAKKTREHKDRLFSSIRDAVPEYEHCFVVHVENMRNQHLHELRQEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
DSR F GK K+MA ALG S + + I + + G GLL T+R DDV + D
Sbjct: 61 SDSRLFLGKTKLMARALGTSPGEALLPGIDRLAERYMHGTVGLLLTSRRPDDVRAYLDAI 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL-------PE-----FPHSIEPQLRQLGLQTNLNKGVV 167
DFA++G ++T DV + G L P ++EP+LR+LG+ T++ G V
Sbjct: 121 SPVDFARAGTVATRDVIIPHGQLYSTGGLVPAADDVPIATALEPELRRLGVPTSIKAGKV 180
Query: 168 TL----------------FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
L + +C+ G VL Q+R+L+L +++F+V +++
Sbjct: 181 VLEAPDNADTDTDSETAAVGGYPICRAGQVLDSRQSRLLRLFGICLSEFRVGALAYWSAA 240
Query: 212 EGTFENL 218
G L
Sbjct: 241 SGEVTEL 247
>gi|50294758|ref|XP_449790.1| mRNA turnover protein MRT4 [Candida glabrata CBS 138]
gi|51316210|sp|Q6FJ04.1|MRT4_CANGA RecName: Full=mRNA turnover protein 4 homolog
gi|49529104|emb|CAG62768.1| unnamed protein product [Candida glabrata]
Length = 239
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y +FV + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVFVLQLDDVRTPVLQEIREAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG ++E E ++N+ ++ G GLLFTN + D V +F+ Y
Sbjct: 61 VGSKLLMGKRKVLEKALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKEYFEAYS 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ + E+ EG P+ E HS+EP LR + + T + G +
Sbjct: 121 RLDYSRPNSRAPITFEVPEGIVYSRGGQIPIEEDVPMAHSLEPTLRNKYEMPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
TL + VCK+G L QA ILK +A+FKV++ +Y+ + T L
Sbjct: 181 TLEAPYLVCKEGQKLDVRQALILKQFGVALAQFKVIISAYYDNESSTVSEL 231
>gi|452820695|gb|EME27734.1| 60S acidic ribosomal protein PO [Galdieria sulphuraria]
Length = 218
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP S+R K + K K + ++ + + ++ Y +I++ + +R+S +K++RN+W
Sbjct: 1 MPTSRRRKNGIIKKQAKNRRQSNADIIEAVTNCLQAYKSIYILNFDCIRSSIMKELRNNW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
KDSRFFFGKNKVM Y LGK++E+E K +H ++ L G G+LFT+R++D V +FD +
Sbjct: 61 KDSRFFFGKNKVMRYVLGKTEEEEPYKGLHQLAPFLSGNIGVLFTSRTRDQVHDFFDNFI 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
++ + G + DV L GP+ + P +EP+LR+LGL + + L D + ++
Sbjct: 121 VNEYPRIGSRAPRDVVLNAGPV-DIPVELEPRLRELGLPIQVQNNEIFLTSDVPLFQENS 179
Query: 181 VLTPEQARILKLLKKKMAKFKV 202
V++ E A+IL+ L + + +V
Sbjct: 180 VISRESAKILETLCMPILEARV 201
>gi|145524313|ref|XP_001447984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415517|emb|CAK80587.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 136/221 (61%), Gaps = 4/221 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP +KR + L+KT KK E+K+ L +L ++++KY +F +N+ + LK+++ W
Sbjct: 1 MPITKRKRTQVLTKTKKKTPEKKELLVKKLKQSLKKYQRAIIFQYKNLSTNPLKEIQQAW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K DS+ F GKNKVM LGK +E KN +++S LKG+ GLL TN++ ++ + D Y
Sbjct: 61 KSDSKLFIGKNKVMQVGLGKGEEQSATKNSYLLSPFLKGETGLLLTNKTLQEIQEYCDTY 120
Query: 120 EDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
+ +FA++G IS + + LKEG L F HSIEP LR+LGL T L + L + + +
Sbjct: 121 KIPEFARAGHISDQTIVLKEGIDTLKGFAHSIEPYLRKLGLNTQLINQQIVLNEKFILAQ 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+G LT EQ +IL+L+ +K+A ++ L +K GTF+ L
Sbjct: 181 EGKPLTVEQTKILRLMNQKLAYLEI-APLCVLEKNGTFKKL 220
>gi|254565821|ref|XP_002490021.1| mRNA turnover protein MRT4 [Komagataella pastoris GS115]
gi|238029817|emb|CAY67740.1| Protein involved in mRNA turnover and ribosome assembly, localizes
to the nucleolus [Komagataella pastoris GS115]
gi|328350427|emb|CCA36827.1| mRNA turnover protein 4 homolog [Komagataella pastoris CBS 7435]
Length = 236
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 125/222 (56%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG + K + DE+ A++ Y ++V + ++R L+DVR+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRDNKDRIFDEVRTALDTYKYVWVLRLDDVRTPVLQDVRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG++ E+E ++N+H + +G GLLFTN + V +F+ Y+
Sbjct: 61 VGSKLLMGKRKVIQKALGETPEEEYKQNLHEIVDVFEGLIGLLFTNEDVNTVSTYFESYK 120
Query: 121 DEDFAK------------SGFISTEDVELKEGPLPEFPHSIEPQLR-QLGLQTNLNKGVV 167
DF + +G I + ++ E PH++EP R + + T + G V
Sbjct: 121 KNDFCRAKEKSSISFTIPAGIIYSTGGQVSESEDVPLPHNLEPTFRNKYKIPTRIKAGKV 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+ + + VC+KGD+L QA ILK ++FK+ + +Y+
Sbjct: 181 VIDEPYKVCEKGDILNVTQALILKQFGIASSEFKIQMLAYYD 222
>gi|145515976|ref|XP_001443882.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411282|emb|CAK76485.1| unnamed protein product [Paramecium tetraurelia]
Length = 220
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP +KR + L+KT KK E+K+ L +L ++++KY VF +N+ + LK+++ W
Sbjct: 1 MPITKRKRNQVLTKTKKKTPEKKELLVKKLKQSLKKYQRAIVFQYKNLSTNPLKEIQQAW 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K DS+ F GKNKVM LG+++E KN +++S LKG+ GLL TN++ ++ + D Y
Sbjct: 61 KADSKLFIGKNKVMQVGLGRNEEQSATKNSYLLSPFLKGETGLLLTNKTLQEIQEYCDTY 120
Query: 120 EDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
+ +FA++G IS + + LKEG L F HSIEP LR+LGL T L + L + + +
Sbjct: 121 KIPEFARAGHISDQTIVLKEGIDTLKGFAHSIEPYLRKLGLNTQLINQQIVLNEKFILTQ 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
+G LT EQ ++L+L+ KK+A ++ L +K GTF+ L
Sbjct: 181 EGKPLTVEQTKLLRLMDKKLAYLEI-APLCVLEKNGTFKKL 220
>gi|365981905|ref|XP_003667786.1| hypothetical protein NDAI_0A03860 [Naumovozyma dairenensis CBS 421]
gi|343766552|emb|CCD22543.1| hypothetical protein NDAI_0A03860 [Naumovozyma dairenensis CBS 421]
Length = 238
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 133/231 (57%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + N+R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTYRYVWVLYLDNVRTPVLQEIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+A ALG+ +E+E ++N+ ++ G GLLFTN D V +F+ Y
Sbjct: 61 AGSKLIMGKKKVLAKALGEKREEEYKENLSKLAKLCTGMTGLLFTNEEVDTVKSYFEAYV 120
Query: 121 DEDFAKSG------FISTEDVEL-KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
D+++ F+ E + + G +P + P HS+EP LR + + T + G +
Sbjct: 121 KLDYSRPNSRAPLTFVIPEGIIYSRGGQIPIEDDIPMVHSLEPTLRNKYEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ ++VC+KGD L QA ILK ++FKV L +++ + T EN+
Sbjct: 181 TIDTPYSVCEKGDKLDVRQALILKQFGIAESEFKVKLAAYFDNETSTVENV 231
>gi|351725167|ref|NP_001236315.1| uncharacterized protein LOC100500064 [Glycine max]
gi|255628929|gb|ACU14809.1| unknown [Glycine max]
Length = 170
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 1/136 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+++VTLSKT KKG + K+ + + + A EKY ++VFS +NMRN KLK+ R
Sbjct: 1 MPKSKRNRQVTLSKTKKKGRDHKETIVNGIKDAAEKYGCVYVFSFENMRNQKLKEFREQL 60
Query: 61 K-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
K +SRFF G NKVM ALG+S DEI +H VS L+G G+ FTN SK++V F +
Sbjct: 61 KSNSRFFLGSNKVMQVALGRSASDEIRPGLHKVSKLLRGDSGMFFTNLSKEEVERLFKEF 120
Query: 120 EDEDFAKSGFISTEDV 135
E+ DFA++G I+TE V
Sbjct: 121 EEYDFARTGSIATEKV 136
>gi|45185241|ref|NP_982958.1| mRNA turnover protein MRT4 [Ashbya gossypii ATCC 10895]
gi|51316302|sp|Q75DK9.1|MRT4_ASHGO RecName: Full=mRNA turnover protein 4 homolog
gi|44980899|gb|AAS50782.1| ABR012Cp [Ashbya gossypii ATCC 10895]
gi|374106161|gb|AEY95071.1| FABR012Cp [Ashbya gossypii FDAG1]
Length = 236
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 132/231 (57%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V ++++R L+++R+ W
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRQALDTYRYVWVLRLEDVRTPVLQEIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ G+ KV+ ALG ++E E ++N+ + +G CGLLFT+ + + V +F Y
Sbjct: 61 AGSKLIMGRRKVLEKALGGTRETEYKENVSGLVKQCEGMCGLLFTDETPETVTAYFREYR 120
Query: 121 DEDFAKSGFISTEDVEL-------KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
D++++ + VE+ + G +P + P HS+EP LR + + T + G +
Sbjct: 121 KADYSRAKSRAPLRVEIPAGVVYSRGGQVPAEDDVPMVHSLEPTLRNKFKMPTRIQNGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
TL + + VC+ G+ L QA ILK A+F+V L +Y+ + E +
Sbjct: 181 TLEQPYLVCEAGETLDVRQALILKQFGVAAAEFRVKLAAYYDGEAAAVEEV 231
>gi|254578038|ref|XP_002495005.1| mRNA turnover protein MRT4 [Zygosaccharomyces rouxii CBS 732]
gi|238937895|emb|CAR26072.1| ZYRO0B01210p [Zygosaccharomyces rouxii]
Length = 236
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 131/231 (56%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVWVLKLDDVRTPVLQEIRTSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ G+ KV+ ALG ++E+E N+H ++S +G GLLFT+ S D V +F+ Y+
Sbjct: 61 AGSKLIMGRRKVLEKALGTTKEEEYRDNLHKLTSHCQGVTGLLFTDESVDTVKGFFETYQ 120
Query: 121 DEDFAKSG-------FISTEDVELKEGPLPE-----FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ I V + G +PE HS+EP +R + + T + KG +
Sbjct: 121 RLDYSRPNSAAPLTFVIPAGVVYSRGGQIPEDEDVPMVHSLEPTMRNKFNIPTRIQKGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
TL + VC++G+ L QA ILK +A+FKV + +++ + E +
Sbjct: 181 TLDSPYKVCEEGEKLDVRQALILKQFGIALAEFKVKVAAYFDSESSKVEEV 231
>gi|156843247|ref|XP_001644692.1| hypothetical protein Kpol_1056p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156115340|gb|EDO16834.1| hypothetical protein Kpol_1056p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 238
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 128/231 (55%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTLS+T KKG E K+ + DE+ A++ Y +++ + ++R L+++R+ W
Sbjct: 1 MPRSKRSKLVTLSQTDKKGRENKERIFDEVRAALDTYRYVWILYLDDVRTPVLQEIRSSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG ++EDE ++N+H ++ G GLLFTN D V +F+ Y
Sbjct: 61 TGSKLILGKRKVLEKALGTTREDEYKENLHKLTKECSGVTGLLFTNEDIDTVRSYFESYA 120
Query: 121 DEDFAKSG------FISTEDVELKEG---PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ F+ E + G P+ + HS+EP LR +L + T + G +
Sbjct: 121 RMDYSRPNSRAPLTFVIPEGIVYSRGGQVPIEDDVPMVHSLEPTLRNKLDIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ + VC KGD L QA ILK +++KV + +Y+ + E +
Sbjct: 181 TVESPYLVCNKGDKLDVRQALILKQFGVAASEYKVKVAAYYDNETSKMEKV 231
>gi|146416159|ref|XP_001484049.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 126/222 (56%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ A++++ ++V + R S L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKIRIFDEVRSALDEFRFVWVIRLMMFRISVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ EDE + N+H +S + G GLLFT+ + + V +F Y
Sbjct: 61 TGSQLLMGKRKVLEKALGEKPEDEYKDNLHKLSKSCTGVSGLLFTDETPETVTAYFSAYS 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ + D + EG P+ E HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKTKAPIDFVIPEGIVYSRGGQIPIEEDVPMSHSVEETLRNKLKVPTRIKSGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
TL + + VC+KGD L QA +LK ++FK L +++
Sbjct: 181 TLSEPYVVCRKGDTLDVRQALLLKQFGVAASEFKPELVAYFD 222
>gi|428673284|gb|EKX74197.1| 60S ribosomal protein L10e, putative [Babesia equi]
Length = 228
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNN---------IFVFSVQNMRNS 51
M SKR K V L+ K RK NL + + + K++ I++ S+ N RNS
Sbjct: 1 MAVSKRKKVVNLTSCKKDAKTRKNNLVESIRNTINKFSEAKESEAGAYIYLLSLSNQRNS 60
Query: 52 KLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDD 111
LK++R R F+GKNKVM ALG E+E+ +H ++ + G+ LL T+ D
Sbjct: 61 PLKNLRAILLPGRLFYGKNKVMQLALGTKPENELYDGVHKIAKDIVGEVALLVTSDHPDL 120
Query: 112 VLMWFDVYEDEDFAKSGFISTEDVELKEGP--LPEFPHSIEPQLRQLGLQTNLNKGVVTL 169
V + Y+ DFAKSG I+TE + LKEG + P ++E Q R LGL T+L G + L
Sbjct: 121 VAEKVNSYKVRDFAKSGNIATETIVLKEGGSDFEQVPGNMEAQFRNLGLPTSLKMGKIVL 180
Query: 170 FKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
D+ + ++G LTP QA +LKLL + A F
Sbjct: 181 MGDYVLSEEGKPLTPNQAHVLKLLGIRTAVF 211
>gi|126138682|ref|XP_001385864.1| mRNA turnover protein MRT4 [Scheffersomyces stipitis CBS 6054]
gi|126093142|gb|ABN67835.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 232
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 125/222 (56%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + D++ A++++ ++V + ++R L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRIFDDVRSALDEFQFVWVLQLDDVRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK +V+ ALG + E+E + N+H +S G GLLFTN + + V +F Y
Sbjct: 61 SGSKLILGKRRVLEKALGDTPEEEYKDNLHKLSKTCTGLPGLLFTNETPETVQAYFTAYS 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D++++ + D + EG P+ E HS+E LR +L + T + G +
Sbjct: 121 KADYSRAKSKAPIDFTIPEGIVYSRGGQVPIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
T+ + + VC KG+ L QA ILK ++FKV + +YN
Sbjct: 181 TMNEPYVVCHKGETLDVRQALILKQFGVAASEFKVNVVAYYN 222
>gi|354489599|ref|XP_003506949.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 150
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
Query: 92 VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
VS L+G+ GLLFTNR+K++V WF Y + DFA++G +T V L GPL +F HS EP
Sbjct: 8 VSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLNPGPLKQFLHSTEP 67
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNK 210
QLR+LGL L KGVVTL D+ VCK+GDVLTPEQAR+L L +MA+FKV + Y+W +
Sbjct: 68 QLRRLGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVL-LFGYEMAEFKVTIKYMW-DA 125
Query: 211 KEGTFENLLD 220
+ G F+ + D
Sbjct: 126 QSGRFQQMDD 135
>gi|190347117|gb|EDK39332.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 234
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ A++++ ++V R S L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKIRIFDEVRSALDEFRFVWVIRSMMFRISVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ EDE + N+H +S + G GLLFT+ + + V +F Y
Sbjct: 61 TGSQLLMGKRKVLEKALGEKPEDEYKDNLHKLSKSCTGVSGLLFTDETPETVTAYFSAYS 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ + D + EG P+ E HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKTKAPIDFVIPEGIVYSRGGQIPIEEDVPMSHSVEETLRNKLKVPTRIKSGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
TL + + VC+KGD L QA +LK ++FK L +++
Sbjct: 181 TLSEPYVVCRKGDTLDVRQALLLKQFGVAASEFKPELVAYFD 222
>gi|68473344|ref|XP_719230.1| potential rRNA processing factor [Candida albicans SC5314]
gi|68473577|ref|XP_719113.1| potential rRNA processing factor [Candida albicans SC5314]
gi|46440916|gb|EAL00217.1| potential rRNA processing factor [Candida albicans SC5314]
gi|46441039|gb|EAL00339.1| potential rRNA processing factor [Candida albicans SC5314]
gi|238883069|gb|EEQ46707.1| mRNA turnover protein 4 [Candida albicans WO-1]
Length = 230
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 127/230 (55%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K L DE+ A++ + I+V ++R L+DVRNDW
Sbjct: 1 MPRSKRSKLVTLAQTEKKGKENKTRLFDEVRSALDTFKYIWVLQFDDIRTPVLQDVRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG++ E+E + N+H +S +G GLLFT+ S + V +F Y
Sbjct: 61 VGSKLILGKRKVLQKALGETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ + D + G + HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKSRAPIDFTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
L + + VC KGDVL QA +LK ++FK+ + +Y+ + ++N
Sbjct: 181 ILEEPYVVCNKGDVLDTRQALLLKQFGVAASEFKIPILGYYDGEVHKYDN 230
>gi|71033805|ref|XP_766544.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353501|gb|EAN34261.1| hypothetical protein, conserved [Theileria parva]
Length = 225
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 5/191 (2%)
Query: 24 QNLRDELVKAVEKYNN---IFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
+N+R+ L K ++ +N +++ ++ N RNS LK +R+ R F+GKNKVM A G
Sbjct: 27 ENIRETLDKFIKNNDNSTFVYLIALNNQRNSPLKTLRSILLPGRVFYGKNKVMRIAFGTK 86
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK-- 138
EDEI NIH +S+ + G+ +L T+ + + V+ Y+ DF+K+G I+T+ + LK
Sbjct: 87 PEDEIHDNIHKISNNINGETAVLITSENPEVVVNKVKGYKVRDFSKAGNIATDTIVLKVD 146
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
E P S+EPQ RQLGL T LN G + L D+T+C+K LTP Q +LKL +M+
Sbjct: 147 GNEFDEIPGSMEPQFRQLGLPTALNMGKIILMGDYTLCEKDKPLTPNQTHLLKLFGIRMS 206
Query: 199 KFKVLLYLWYN 209
F+ + ++N
Sbjct: 207 LFEANVVGFWN 217
>gi|354489405|ref|XP_003506853.1| PREDICTED: mRNA turnover protein 4 homolog [Cricetulus griseus]
Length = 159
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
+ + GLLFTN +K++V WF Y + DFA +G +T V L G L +FPHS+EPQLRQ
Sbjct: 16 IASEVGLLFTNHTKEEVNEWFTKYTERDFASAGNKATLTVSLDPGLLEQFPHSMEPQLRQ 75
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGT 214
GL L KGVVTL D+ VCK+GDVLTPEQAR+LKL +MA+FKV + Y+W + K G
Sbjct: 76 QGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW-DAKSGR 134
Query: 215 FENL 218
F+ +
Sbjct: 135 FQKM 138
>gi|448081620|ref|XP_004194933.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
gi|359376355|emb|CCE86937.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
Length = 232
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 124/224 (55%), Gaps = 13/224 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KK K + D++ A++ + ++V + ++R L+++RNDW
Sbjct: 1 MPRSKRSKLVTLAQTEKKDRSNKVRIFDDVRSALDTHRYVWVLKLDDVRTPVLQEIRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG S E+E + N+ +SS L G GLLFT+ + + V +F+ Y
Sbjct: 61 TGSKLILGKRKVLVKALGDSPEEEYKDNLSKISSTLSGMSGLLFTDETPETVQAYFNAYT 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
+DF+++ + D + G P+ E HS+E LR + + T + G +
Sbjct: 121 RQDFSRAKSSAPIDFTIPSGVVYSRGGQIPVEEDVPMSHSLEETLRNKYSMPTKMKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
L + + VCKKGD L QA ILK ++FKV + +++ K
Sbjct: 181 VLDEPYVVCKKGDTLDVRQALILKQFGVAASEFKVPIIAYFDGK 224
>gi|255733086|ref|XP_002551466.1| mRNA turnover protein 4 [Candida tropicalis MYA-3404]
gi|240131207|gb|EER30768.1| mRNA turnover protein 4 [Candida tropicalis MYA-3404]
Length = 229
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 128/225 (56%), Gaps = 13/225 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K L D++ A++ Y ++V ++R L+D+RNDW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRLFDDVRSALDTYKYVWVLQFDDIRTPVLQDIRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+S+ GK KV+ ALG+S E+E + N++ ++ L+G GLLFTN + V +F Y
Sbjct: 61 NESKLILGKRKVLQKALGESIEEEYKDNLNQLTKILEGLPGLLFTNEDPETVDAYFKAYS 120
Query: 121 DEDFAKS------GFISTEDVELKEG---PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ FI + + G P+ E HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKSKAPIDFIIPQGIVYSRGGQIPIEEDVPMSHSLEETLRNKLRVPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
L + + VC +G+VL QA +LK ++FKV + +Y+ E
Sbjct: 181 VLDEPYVVCNEGEVLDVRQAMLLKQFGVAASEFKVPVLGYYHDGE 225
>gi|332021525|gb|EGI61890.1| mRNA turnover protein 4-like protein [Acromyrmex echinatior]
Length = 329
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 91/119 (76%), Gaps = 5/119 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKK++L+KT +KGL KQ + +++ K VE+Y+ IF+ S+QN RN+KL D+R++W
Sbjct: 165 MPKSKRDKKISLTKTDRKGLVLKQRIMEDVKKCVEEYSCIFLISIQNTRNTKLLDLRSEW 224
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALK-----GQCGLLFTNRSKDDVLM 114
KDS+ FFGK +++A LGKS+E E+ + IH +++A+K GQCGLLFTNR + L+
Sbjct: 225 KDSKLFFGKLRIIALGLGKSKETEVAEGIHKLANAMKNHSMRGQCGLLFTNRPRKQKLL 283
>gi|344300279|gb|EGW30619.1| hypothetical protein SPAPADRAFT_63450 [Spathaspora passalidarum
NRRL Y-27907]
Length = 232
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 125/224 (55%), Gaps = 14/224 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KK E K + DE+ A++++ ++V +Q++R L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKTKENKTRIFDEVRSALDEHQYVWVLQLQDIRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALK-GQCGLLFTNRSKDDVLMWFDVY 119
S+ GK KV+ ALG++ DE N+H +S + G GLLFT+ D V +F Y
Sbjct: 61 AGSKLLLGKRKVLIKALGETPADEYRDNLHELSKTCEDGLIGLLFTDEKPDVVDGYFKAY 120
Query: 120 EDEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGV 166
+D++++ S D + EG P+ E HS+E LR +L + T + G
Sbjct: 121 VKQDYSRAKTKSPIDFTIPEGIVYSRGGQIPIEEDVPMSHSLEETLRNKLKVPTKIKSGK 180
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
+ L +TVC KGDVL QA +LK ++FKV +Y++
Sbjct: 181 IVLEAPYTVCHKGDVLDVRQALLLKQFGVAGSEFKVATIAYYDR 224
>gi|241956692|ref|XP_002421066.1| mRNA turnover protein MRT4 [Candida dubliniensis CD36]
gi|223644409|emb|CAX41223.1| mRNA turnover protein, putative [Candida dubliniensis CD36]
Length = 235
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 14/231 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K L DE+ A++ Y I+V ++R L+DVRNDW
Sbjct: 1 MPRSKRSKLVTLAQTEKKGKENKTRLFDEVRTALDTYKYIWVLQFDDIRTPVLQDVRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG++ E+E + N+H +S +G GLLFT+ + V +F Y
Sbjct: 61 VGSKLILGKRKVLQKALGETVEEEYKDNLHQLSKLCEGLPGLLFTDELPETVDAYFKAYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ + D + G + HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKSRAPIDFTIPAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFEN 217
L + + VC KGDVL QA +LK ++FK+ +L +Y+ + ++N
Sbjct: 181 VLEEPYVVCNKGDVLDTRQAMLLKQFGVAASEFKIPILGYYYDGEVHKYDN 231
>gi|412986243|emb|CCO17443.1| predicted protein [Bathycoccus prasinos]
Length = 299
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 44/278 (15%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR+K V L++ KK + K++L + + AV+ Y ++FVF +NMRN K +R+D
Sbjct: 1 MPKSKRNKVVALTQVKKKDRKWKESLVESIRDAVDTYPSVFVFRCKNMRNETFKSLRDDV 60
Query: 61 KD-SRFFFGKNKVM-AYALGKSQEDEIEKNI-HVVSS----------------------- 94
+ SRFF G NK+M A LGK E+ ++ H+V++
Sbjct: 61 SNTSRFFVGGNKLMRAALLGKESEEGLKTFAEHIVNNRDGKDDDDDDGGGGGQKQQKETK 120
Query: 95 -ALKGQ-----------CGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
+G+ G++FTN SK+D++ + E +DFA+ G I+TE + EGP+
Sbjct: 121 KQQRGRQNEEFDLNTTTTGIVFTNLSKEDLMQAMEAKETKDFARVGQIATETIVCPEGPV 180
Query: 143 PE-----FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
H++E LR+ GL T LNKGVV + +CK+G L+ +Q +L+ K+
Sbjct: 181 KNCFDVPMSHTLEAMLRKHGLPTKLNKGVVECVNEKIICKRGVKLSSDQCALLRQFGYKL 240
Query: 198 AKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
A FK+ L + K G E ++ + + +I D DE
Sbjct: 241 ATFKLRLVAGWEKSTGETEVFMNEDDSE-EILDYGTDE 277
>gi|156848997|ref|XP_001647379.1| hypothetical protein Kpol_1018p53 [Vanderwaltozyma polyspora DSM
70294]
gi|156118065|gb|EDO19521.1| hypothetical protein Kpol_1018p53 [Vanderwaltozyma polyspora DSM
70294]
Length = 236
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTLS+T KKG E K+ + DE+ A++ Y +++ + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLSQTDKKGRENKERIFDEVRTALDTYKYVWILYLDDVRTPVLQEIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG ++EDE ++N+H ++ G GL FTN D +F Y
Sbjct: 61 TGSKLILGKRKVLEKALGTTREDEYKENLHKLTKECNGVTGLFFTNEDIDTFQNYFKSYT 120
Query: 121 DEDFAKSG------FISTEDVEL-KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
D ++ F+ E + + G +P + P HS+EP LR +L + T + G +
Sbjct: 121 RMDCSRPNSKAPLTFVIPEGIVYSRGGQIPVEDDVPMVHSLEPTLRNKLEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ + VC +GD L QA ILK AKFKV + +Y+ +E E +
Sbjct: 181 TIESPYLVCNEGDKLDVRQALILKQFGVAAAKFKVRVAAYYDNEESKMEKV 231
>gi|194379904|dbj|BAG58304.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 74/93 (79%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVS 93
K SR FFGKNKVM ALG+S DE + N+H VS
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLHQVS 93
>gi|84998062|ref|XP_953752.1| 60S ribosomal protein L10e [Theileria annulata]
gi|65304749|emb|CAI73074.1| 60S ribosomal protein L10e, putative [Theileria annulata]
Length = 225
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 6/190 (3%)
Query: 24 QNLRDELVKAVEKYNN---IFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
+N+R+ L ++K +N +++ S+ N RNS LK +R+ R F+GKNKVM A G
Sbjct: 27 ENIRETLENFIKKNDNSTFVYLISLNNQRNSPLKTLRSLLLPGRVFYGKNKVMRIAFGTK 86
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK-E 139
EDEI NIH +S + G+ +L T+ + V+ Y+ DF+K+G I+T+ + LK +
Sbjct: 87 PEDEIHDNIHKISKNINGETAVLITSEDPEVVIKKVKEYKVRDFSKAGNIATDTIVLKVD 146
Query: 140 G-PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
G E P S+EPQ RQLG+ T LN G + L D T+C+K LTP Q +LKL +M+
Sbjct: 147 GKEFDEIPGSMEPQFRQLGMPTALNMGKIILMGDFTLCEKDKPLTPNQTHLLKLFGIRMS 206
Query: 199 KFKV-LLYLW 207
F+ +L W
Sbjct: 207 LFEANVLGFW 216
>gi|363749531|ref|XP_003644983.1| hypothetical protein Ecym_2436 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888616|gb|AET38166.1| Hypothetical protein Ecym_2436 [Eremothecium cymbalariae
DBVPG#7215]
Length = 236
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ A++KY ++V ++++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRSALDKYRFVWVLQLEDIRTPVLQEIRGAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+A ALG ++E E ++NIH + G GLLFT+ + V +F Y
Sbjct: 61 NGSKLILGKRKVLAKALGANRETEYKENIHRLVKYFDGVTGLLFTDEEQVTVEEYFKAYV 120
Query: 121 DEDFAKSGF-------ISTEDVELKEGPLPE-----FPHSIEPQLR-QLGLQTNLNKGVV 167
D++++ I V + G PE HS+EP +R + + T + G +
Sbjct: 121 KADYSRAKSKAPLTFKIPAGVVYSRGGQTPEEEDIPMVHSLEPTMRNKFKIPTKIKNGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L ++ VC+KG L QA ILK A+FKV + +Y+ K E +
Sbjct: 181 FLENEYLVCEKGQTLDVRQALILKQFGIAAAEFKVKIPAFYDNKSANMEAI 231
>gi|366988813|ref|XP_003674174.1| hypothetical protein NCAS_0A12360 [Naumovozyma castellii CBS 4309]
gi|342300037|emb|CCC67794.1| hypothetical protein NCAS_0A12360 [Naumovozyma castellii CBS 4309]
Length = 239
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 129/229 (56%), Gaps = 13/229 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ + ++ Y ++V + N+R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREGLDTYRYVWVLYLDNVRTPVLQEIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+A ALG+ +E+E ++N+ ++S G GLLFTN D V +F Y
Sbjct: 61 TGSKLIMGKKKVLAKALGEKREEEYKENLFKLASLCTGVTGLLFTNEDVDTVKNYFQSYV 120
Query: 121 DEDFAKSG------FISTEDVEL-KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
DF++ F+ E + + G +P + P HS+EP LR + + T + G +
Sbjct: 121 KLDFSRPNSRAPLTFVIPEGIVYSRGGQIPIDDDIPMVHSLEPTLRNKFEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
TL + VC++G+ L QA ILK ++FKV + +Y+ + T E
Sbjct: 181 TLDSPYQVCQEGEKLDVRQALILKQFGVAASEFKVKVAAYYDNETSTVE 229
>gi|219117724|ref|XP_002179652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408705|gb|EEC48638.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 220
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 131/222 (59%), Gaps = 17/222 (7%)
Query: 10 VTLSKTVKKGL-ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD------ 62
V L++T K+ E K ++ ++V+K+ ++++FS +NMR++K KDVR ++
Sbjct: 2 VALTQTEKRATREHKSAFIKDVRESVDKHKSLYLFSYENMRSNKFKDVRRHFRGTAKEEP 61
Query: 63 SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQC-GLLFTNRSKDDVLMWFDVYED 121
SR F GKNK++ ALG++ E+E N+ V+ + G C G+L T+RS++DV +F Y +
Sbjct: 62 SRIFLGKNKLLQLALGRTPEEEYSDNLRHVAKRITGGCVGVLSTSRSRNDVEGYFSSYSE 121
Query: 122 EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT----VCK 177
DFA++G +S +V + G L FP S+ Q R+LG+ + G V +F+D +CK
Sbjct: 122 PDFARAGSVSPREVLVNSGMLDAFPVSMMEQFRKLGMPVEIQNGKV-VFRDGVSEFRICK 180
Query: 178 KGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFENL 218
+G+ L+ E+ ++L K+ FKV L+ W N G FE L
Sbjct: 181 EGETLSAEKCKLLVHFGIKITNFKVGLVCRWEN---GEFELL 219
>gi|320580635|gb|EFW94857.1| rRNA processing factor, putative [Ogataea parapolymorpha DL-1]
Length = 232
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 124/226 (54%), Gaps = 13/226 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ A++ + ++V + ++R L+D+R DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKTRIFDEVRAALDAHRYVWVLKLDDVRTPVLQDIRKDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG++ E+E + N+H + ++G GLLFT+ + + V +F Y
Sbjct: 61 TGSKLILGKRKVLEKALGETPEEEYKDNLHKLGEYIEGLIGLLFTDETPETVKAYFSAYV 120
Query: 121 DEDFAKS------------GFISTEDVELKEGPLPEFPHSIEPQLR-QLGLQTNLNKGVV 167
D+ ++ G + + ++ E HS+EP LR + + T + G +
Sbjct: 121 KSDYPRAKSKSPITFVIPEGIVYSRGGQVAEEEDVPMSHSMEPTLRNKFKMPTKIVSGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
TL + + V +KGDVL QA ILK A F+V + +++ + G
Sbjct: 181 TLPEPYKVVEKGDVLDVRQALILKTFGVACADFRVEMRAYHDGESG 226
>gi|403221382|dbj|BAM39515.1| 60S ribosomal protein L10e [Theileria orientalis strain Shintoku]
Length = 232
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKY--NN------IFVFSVQNMRNSK 52
MP SKR K L+ + KK ++K NL + + +E++ NN +++ ++ + RNS
Sbjct: 1 MPSSKRKLKTQLT-SCKKDSKKKLNLIENIRGTLEQFIKNNKNESTFVYIIALNDQRNSP 59
Query: 53 LKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDV 112
LK +R+ R F+GKNKVM ALG EDEI +N+H +S L G+ +L T+ D V
Sbjct: 60 LKTLRSILLPGRVFYGKNKVMRIALGTKPEDEIFENLHKISENLFGESAILITSEMPDVV 119
Query: 113 LMWFDVYEDEDFAKSGFISTEDVELKEGP--LPEFPHSIEPQLRQLGLQTNLNKGVVTLF 170
+ + ++ DF K ++ E + LKEG + P S+EPQ R+LG+ T LN G + L
Sbjct: 120 MEKVNGFKVRDFIKCDKLAKETIVLKEGGDDFKDIPGSMEPQFRKLGVPTALNMGKIVLM 179
Query: 171 KDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
D VC+K L+ Q++ILKLL +M+ F + ++N
Sbjct: 180 GDFVVCEKNKRLSANQSQILKLLGIRMSLFSATVKGFWN 218
>gi|354542924|emb|CCE39642.1| hypothetical protein CPAR2_600560 [Candida parapsilosis]
Length = 237
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 17/233 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K VTLS+T KKG E K L DE+ A++ Y+++++ ++++R L+D+R+DW
Sbjct: 1 MPKSKRSKLVTLSQTDKKGKESKLKLFDEIRSALDNYSHVWILQMKDIRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQED----EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
DS+ GK KV+ A G++ E+ E+ K ++S+ G+LFTN V +F
Sbjct: 61 TDSKLILGKRKVIQKAFGETPEEEYLSELAKLAKILSTTEDLIPGILFTNEDNATVQSYF 120
Query: 117 DVYEDEDFAKSGFISTEDVEL-------KEGPLPE-----FPHSIEPQLR-QLGLQTNLN 163
D Y+ +D+ + S E+ + G +PE HS+E LR + + T +
Sbjct: 121 DAYKRQDYTRVKSKSPITFEIPAGIVYSRGGQIPEEEDVPMSHSLEETLRNKYKMPTKIK 180
Query: 164 KGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
G + L K + VC +GD+L QA ILK ++FKV L Y+K+ + E
Sbjct: 181 SGKIVLEKPYLVCNEGDILDVRQALILKQFGVAASEFKVPLVGHYDKEASSIE 233
>gi|448538124|ref|XP_003871458.1| Mrt4 mRNA turnover protein [Candida orthopsilosis Co 90-125]
gi|380355815|emb|CCG25334.1| Mrt4 mRNA turnover protein [Candida orthopsilosis]
Length = 240
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 126/233 (54%), Gaps = 17/233 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K VTLS+T KKG E K L DE+ A++ Y+ +++ ++++R L+D+R+DW
Sbjct: 1 MPKSKRSKLVTLSQTDKKGKESKLKLFDEIRSALDNYSQVWILQMKDIRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDE----IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
DS+ GK KV+ A G++ E+E + K ++S+ G+LFTN V +F
Sbjct: 61 TDSKLILGKRKVIQKAFGETPEEEYLSDLAKLTKILSTTDDLIPGILFTNEDDSTVQSYF 120
Query: 117 DVYEDEDFAKSGFISTEDVEL-------KEGPLPE-----FPHSIEPQLR-QLGLQTNLN 163
D Y+ +D+ + S E+ + G +PE HS+E LR + + T +
Sbjct: 121 DAYKRQDYTRVKNKSPITFEIPAGIVYSRGGQIPEEEDVPMSHSLEETLRNKYKMPTKIK 180
Query: 164 KGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
G + L K + VC +GDVL QA ILK ++FKV L Y+K+ E
Sbjct: 181 SGKIVLEKPYLVCNEGDVLDVRQALILKQFGVAASEFKVPLVGHYDKESAKVE 233
>gi|426222832|ref|XP_004005586.1| PREDICTED: mRNA turnover protein 4 homolog [Ovis aries]
Length = 92
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 72/90 (80%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRDKKV+L+KT KKGLE KQNL +EL K V+ Y +F+FSV NMRNSKLKD+RN W
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIH 90
K SR FFGKNKVM ALG+S DE + N+H
Sbjct: 61 KHSRMFFGKNKVMMVALGRSPSDEYKDNLH 90
>gi|260941546|ref|XP_002614939.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851362|gb|EEQ40826.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 231
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 122/222 (54%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ +A++++ ++V + ++R L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKARIFDEVREALDEFKYVWVLQLDDVRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK +V+ ALG + +E + N+H ++ G GLLFTN + + V +F+ Y
Sbjct: 61 VGSKLMLGKRRVLEKALGDTPAEEYKDNLHKLAKLCSGVSGLLFTNETPETVEAYFNAYT 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+ ++ + D + EG P+ E HS+E LR + + T + G +
Sbjct: 121 KADYCRAKSKAPIDFTIPEGIVYSRGGQIPIEEDVPMSHSLEETLRNKYKIPTKIKSGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+ + VC KGD L QA ILK ++FKV + +Y+
Sbjct: 181 FINEPFVVCTKGDTLDVTQALILKQFGVAASEFKVKMIAYYD 222
>gi|50304371|ref|XP_452135.1| mRNA turnover protein MRT4 [Kluyveromyces lactis NRRL Y-1140]
gi|49641267|emb|CAH02528.1| KLLA0B13563p [Kluyveromyces lactis]
Length = 238
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ + +V ++++R L+++R+ W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDSFRYAWVLHLEDVRTPVLQEIRSSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ E+E ++N+ + G GLLFTN D V +F Y
Sbjct: 61 VGSKLIMGKRKVLVKALGEKPEEEYKENLAKLCKHCSGVTGLLFTNEPVDVVEDYFKAYV 120
Query: 121 DEDFAK-------SGFISTEDVELKEGPLPE-----FPHSIEPQLR-QLGLQTNLNKGVV 167
DF++ S I V + G +PE HS+EP LR + + T + G +
Sbjct: 121 RADFSRPKSKAPLSFTIPAGIVYSRGGQIPEEEDVPMIHSLEPTLRNKFKIPTKIKNGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ + VC+KG L QA ILK A+F+V + +Y+ + + E +
Sbjct: 181 TIESPYLVCEKGKTLDVTQALILKQFGIAAAEFRVKVAAYYDNETSSVEQI 231
>gi|403214468|emb|CCK68969.1| hypothetical protein KNAG_0B05360 [Kazachstania naganishii CBS
8797]
Length = 236
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+A ALG+++E E + NI +S L G GLLFTN + V +F Y
Sbjct: 61 VGSKLIMGKKKVLAKALGENKESEYKDNIFKLSHCLTGVVGLLFTNEEVNTVKDYFKSYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLR-QLGLQTNLNKGVV 167
D+++ + D + EG + + P HS+EP LR + + T + G +
Sbjct: 121 RSDYSRPNSKAPLDFTIPEGIVYSRGGQIPVEDDVPMVHSMEPTLRNKFHIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
TL + VC++G L Q ILK A+FKV + +Y+ + E +
Sbjct: 181 TLEQPFKVCEEGQKLDVTQTLILKQFGIAAAQFKVKVEAYYDNETSKIEKV 231
>gi|449015466|dbj|BAM78868.1| 60S acidic ribosomal protein PO [Cyanidioschyzon merolae strain
10D]
Length = 235
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 128/236 (54%), Gaps = 15/236 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAV--EKYNNIFVFSVQNMRNSKLKDVRN 58
MP+SKR +++ L T K + K + ELV++ K+ I+VF ++RN LK+ R
Sbjct: 1 MPRSKRARRLALHGTTTKTRQEKAKM-IELVRSFLPPKHTKIYVFEYGDIRNQSLKEFRE 59
Query: 59 DWK-----DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVL 113
+ K R F G N+V+ ALG+S E+ + +H + L+G+ GLLF + V
Sbjct: 60 EVKRLPEGGGRLFLGSNRVLQVALGRSPEEALAPELHQLGEKLRGKRGLLFCSAPHVLVQ 119
Query: 114 MWFDVYEDEDFAKSGFISTEDVELKEG-PLPEFPHSIEPQLRQLGLQTNLNKGVVTL--- 169
F +E ++A++G I+ EDV L G PL + P S P+LR+LGL +L G + L
Sbjct: 120 ELFANFERREYARAGTIAPEDVRLAVGEPLEDLPASSGPKLRELGLPISLRGGRLFLDVI 179
Query: 170 ---FKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDRE 222
K +C KG++L+ EQ +L++L ++A ++ L ++ + E L D+E
Sbjct: 180 AGPDKHFLICSKGEILSAEQCVLLRMLGIRLATARLHLRYRWDAEHCKVEELGDQE 235
>gi|444316480|ref|XP_004178897.1| hypothetical protein TBLA_0B05490 [Tetrapisispora blattae CBS 6284]
gi|387511937|emb|CCH59378.1| hypothetical protein TBLA_0B05490 [Tetrapisispora blattae CBS 6284]
Length = 239
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ + ++V + ++R L+++R+ W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTFKYVWVLHLDDVRTPVLQEIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG +EDE + N+ +S G GLLFT+ D V +F Y
Sbjct: 61 TGSKLILGKRKVLQKALGTRREDEYKDNLFRLSQTCSGVTGLLFTDEEVDTVKDYFKSYS 120
Query: 121 DEDFAKSGFISTEDVEL-------KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
+DF++ S EL + G +P + P HS+EP LR + + T + KG +
Sbjct: 121 RKDFSRPNSRSPITFELPAGIIYSRGGQIPIEDDLPMVHSLEPTLRNKFEIPTKIVKGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
T+ + VC+KG+ L +A ILK ++FKV + +YN
Sbjct: 181 TIDSPYKVCEKGEKLDVRKALILKQFGIAESEFKVKVSSFYN 222
>gi|149236563|ref|XP_001524159.1| mRNA turnover protein 4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452535|gb|EDK46791.1| mRNA turnover protein 4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 237
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 18/236 (7%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + VTLS+T KKG E K L D++ A++ +N +++ ++R L+D+R+DW
Sbjct: 1 MPKSKRSRLVTLSQTDKKGKESKTKLFDDIRSALDTFNYLWILEFNHIRTPVLQDIRSDW 60
Query: 61 -KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQC----GLLFTNRSKDDVLMW 115
+S+ GK KV+ ALG++ E+E ++N+H V+ L GLLFTN + V +
Sbjct: 61 GSESKLICGKRKVIQKALGETPEEEYQENLHHVTKILSKSGGLTPGLLFTNETPQTVRDY 120
Query: 116 FDVYEDEDF------AKSGFISTEDVEL-KEGPLPE-----FPHSIEPQLR-QLGLQTNL 162
F+ Y +D+ A F+ + V + G +PE HS+E LR + + T +
Sbjct: 121 FEAYNRKDYSRVKTKAPIKFVIPQGVVYSRGGQIPEEEDVVMSHSMEETLRNKYKIPTKI 180
Query: 163 NKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
G + L + + VC++GDVL QA ILK +++FKV L Y+K E E +
Sbjct: 181 KSGKIWLEEPYLVCEEGDVLDVRQALILKQFGVALSEFKVPLIAVYDKVEAKAEKI 236
>gi|367000505|ref|XP_003684988.1| mRNA turnover protein MRT4 [Tetrapisispora phaffii CBS 4417]
gi|357523285|emb|CCE62554.1| hypothetical protein TPHA_0C04040 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 127/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ ++++ + ++ + ++R L+D+R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIRESLDTFRYCWILYLDDVRTPVLQDIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+++E+E ++NI +S KG GLLFTN + +F+ Y
Sbjct: 61 TGSKLILGKRKVLEKALGENRENEYKENIFKLSKLCKGVTGLLFTNEDVETTKAYFESYT 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ + + EG P+ E HS+EP LR + + T + G +
Sbjct: 121 RMDYSRPNSRAPLTFTIPEGIVYSRGGQVPIEEDVPMVHSLEPTLRNKFEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
TL + VC++G L +QA ILK ++FKV + +Y+ + T E +
Sbjct: 181 TLEAPYLVCEEGKKLDVKQALILKQFGVAASEFKVKVVAYYDNESTTVETV 231
>gi|410074335|ref|XP_003954750.1| hypothetical protein KAFR_0A01770 [Kazachstania africana CBS 2517]
gi|372461332|emb|CCF55615.1| hypothetical protein KAFR_0A01770 [Kazachstania africana CBS 2517]
Length = 236
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y +++ + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEIREALDTYRYVWILHLDDVRTPVLQEIRTAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ A+G + +E + N+H +S G GLLFTN + V +F Y
Sbjct: 61 TGSKLIMGKQKVLQKAIGDNVTNEYKDNLHKLSKFFTGVTGLLFTNEDVETVKDYFRAYS 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE-FP--HSIEPQLR-QLGLQTNLNKGVV 167
D+++ I+ + G P+ E P HS+EP R + + T + KG +
Sbjct: 121 RSDYSRPNSIAPLTFVIPSGIVYSRGGQIPIEEDIPMVHSLEPTFRNKFNIPTTIKKGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ +TVC++G L QA ILK ++FKV + +Y+ + E +
Sbjct: 181 TIDSPYTVCEEGKKLDVRQALILKQFGIAASEFKVKISAFYDTESAEVEKV 231
>gi|365759671|gb|EHN01448.1| Mrt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 236
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 125/230 (54%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+D+R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQDIRTSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ +E+E ++N+ +S G GLLFT+ + V +F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLFQLSKLCSGVTGLLFTDEDVNTVKEYFQTYV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----------PEFP--HSIEPQLR-QLGLQTNLNKGVV 167
D+++ + + EG + + P HS+EP +R + + T++ G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQISVEEDVPMIHSLEPTMRNKFEIPTSIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
T+ + VC +G+ L QA ILK ++FKV + +Y+ T EN
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGVAASEFKVKVSAYYDNDTSTVEN 230
>gi|367008632|ref|XP_003678817.1| mRNA turnover protein MRT4 [Torulaspora delbrueckii]
gi|359746474|emb|CCE89606.1| hypothetical protein TDEL_0A02740 [Torulaspora delbrueckii]
Length = 238
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 124/223 (55%), Gaps = 13/223 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL+ T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLANTEKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTGW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG ++EDE +N+H ++ G GLLFT+ + V +F Y
Sbjct: 61 AGSKLILGKRKVLEKALGLNREDEYSENLHKLTRHCGGVTGLLFTDEDVNVVKEYFQSYT 120
Query: 121 DEDFAKSG-------FISTEDVELKEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGVV 167
D+++ I + + G +P + P HS+EP LR + + T + G +
Sbjct: 121 RSDYSRPNSRAPLTFTIPAGIIYSRGGQIPTEEDVPMVHSLEPTLRNKFQIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNK 210
T+ +TVC++G+ L +A ILK A+FKV + +Y+K
Sbjct: 181 TIESPYTVCEEGEKLDVRKALILKQFGIADAQFKVKVAAYYDK 223
>gi|50423153|ref|XP_460157.1| mRNA turnover protein MRT4 [Debaryomyces hansenii CBS767]
gi|49655825|emb|CAG88430.1| DEHA2E19580p [Debaryomyces hansenii CBS767]
Length = 232
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ A++++ +++ + ++R L+D+R DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKTRIFDEVRSALDEFRFVWILQLDDVRTPVLQDIRTDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK +V+ ALG + E+E + N+H +S G GLLFTN + D V +F Y
Sbjct: 61 AGSKLILGKRRVLEKALGDTPEEEYKDNLHKLSKLCTGVSGLLFTNETPDTVQAYFTAYS 120
Query: 121 DEDFAKSGFISTEDVELKEGPL------------PEFPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ + D + EG + HS+E LR +L + T + G +
Sbjct: 121 KQDYSRAKSKAPIDFTIPEGIVYSRGGQIAIEEDVPMSHSLEETLRNKLKVPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L + + VC +G+ L +A +LK ++FKV +++
Sbjct: 181 ILNEPYVVCTEGETLDVRKALLLKQFGIAASEFKVNTIAYFD 222
>gi|358331559|dbj|GAA50352.1| mRNA turnover protein 4 [Clonorchis sinensis]
Length = 215
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 91/153 (59%)
Query: 64 RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDED 123
R FGKNKV AL K + ++ +S +KGQC LL TN S ++ FD +
Sbjct: 13 RIIFGKNKVTILALRKRLGKALRPHLDALSKFIKGQCALLLTNLSVRELREKFDALRSSE 72
Query: 124 FAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLT 183
FA+ G + + V L GP +F H++EP LRQLGL L +GVV L +D+ CK+ LT
Sbjct: 73 FARPGVPAPQTVTLAAGPCHKFTHTLEPYLRQLGLPVKLVRGVVILEEDYIACKRDQELT 132
Query: 184 PEQARILKLLKKKMAKFKVLLYLWYNKKEGTFE 216
PEQ R+LKL + ++++F+V + ++++EG E
Sbjct: 133 PEQCRVLKLFELQLSEFRVAIIASWSEEEGVLE 165
>gi|441671201|ref|XP_003271587.2| PREDICTED: mRNA turnover protein 4 homolog [Nomascus leucogenys]
Length = 144
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
Query: 113 LMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
L WF Y + D+A++G + V L GPL +FPHS+EPQLRQLGL T L +GVVTL D
Sbjct: 18 LRWFTKYTEMDYARAGNTAAFPVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSD 77
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFENLLD 220
+ VCK+GDVLTPEQARILKL +MA+FKV + Y+W + + G+F+ + D
Sbjct: 78 YEVCKEGDVLTPEQARILKLFGYEMAEFKVTVKYMW-DSQSGSFQQMGD 125
>gi|406604529|emb|CCH44017.1| mRNA turnover protein 4 [Wickerhamomyces ciferrii]
Length = 238
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 120/222 (54%), Gaps = 13/222 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K + DE+ +A++ Y +++F + ++R L+D+R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKNRIFDEVREALDTYRFVWLFYLDDVRTPVLQDIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK +V+ ALG EDE ++N+ S G GLLFTN + +F Y
Sbjct: 61 VGSKLILGKRRVLEKALGDKIEDEYKENLSKFSKLADGVTGLLFTNEDVETTSSYFAAYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPE------------FPHSIEPQLR-QLGLQTNLNKGVV 167
+D++++ S D + EG + HS+E +R + + T + G +
Sbjct: 121 KQDYSRAKSKSPIDFTIPEGIIYSRGGQISIEDDVPMSHSLEETMRNKFKIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
T+ + + V KGDVL QA ILK ++FKV + +Y+
Sbjct: 181 TINEPYHVVNKGDVLDVRQALILKQFGIAASEFKVKVKAYYD 222
>gi|401624872|gb|EJS42911.1| mrt4p [Saccharomyces arboricola H-6]
Length = 236
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 123/230 (53%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ +E+E ++N+ +S G GLLFTN + V +F+ Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLFQLSKLCSGVTGLLFTNEDVNTVKEYFESYA 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLR-QLGLQTNLNKGVV 167
D+++ + + EG + + P HS+EP +R + + T + G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIIYSRGGQIPAEDDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
T+ + VC + L QA ILK ++FKV + +Y+ T EN
Sbjct: 181 TIDSPYLVCTMDEKLDVRQALILKQFGVAASEFKVKVSAYYDNDNSTVEN 230
>gi|6322843|ref|NP_012916.1| Mrt4p [Saccharomyces cerevisiae S288c]
gi|465665|sp|P33201.1|MRT4_YEAST RecName: Full=mRNA turnover protein 4
gi|263500|gb|AAB24904.1| ribosomal protein L10 homolog [Saccharomyces cerevisiae]
gi|485985|emb|CAA81844.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151941536|gb|EDN59899.1| protein involved in mRNA turnover and ribosome assembly
[Saccharomyces cerevisiae YJM789]
gi|190409813|gb|EDV13078.1| mRNA turnover protein 4 [Saccharomyces cerevisiae RM11-1a]
gi|207343441|gb|EDZ70898.1| YKL009Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271557|gb|EEU06600.1| Mrt4p [Saccharomyces cerevisiae JAY291]
gi|259147823|emb|CAY81073.1| Mrt4p [Saccharomyces cerevisiae EC1118]
gi|285813250|tpg|DAA09147.1| TPA: Mrt4p [Saccharomyces cerevisiae S288c]
gi|323304120|gb|EGA57898.1| Mrt4p [Saccharomyces cerevisiae FostersB]
gi|323308203|gb|EGA61452.1| Mrt4p [Saccharomyces cerevisiae FostersO]
gi|323332813|gb|EGA74218.1| Mrt4p [Saccharomyces cerevisiae AWRI796]
gi|323354125|gb|EGA85971.1| Mrt4p [Saccharomyces cerevisiae VL3]
gi|365764649|gb|EHN06171.1| Mrt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298130|gb|EIW09228.1| Mrt4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 236
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 124/230 (53%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ +E+E ++N++ +S G GLLFT+ + V +F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYV 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ + + EG P E HS+EP +R + + T + G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
T+ + VC +G+ L QA ILK ++FKV + +Y+ T E+
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKVSAYYDNDSSTVES 230
>gi|349579553|dbj|GAA24715.1| K7_Mrt4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 236
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 124/230 (53%), Gaps = 13/230 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ Y ++V + ++R L+++R W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG+ +E+E ++N++ +S G GLLFT+ + V +F Y
Sbjct: 61 AGSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYV 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
D+++ + + EG P E HS+EP +R + + T + G +
Sbjct: 121 RSDYSRPNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
T+ + VC +G+ L QA ILK ++FKV + +Y+ T E+
Sbjct: 181 TIDSPYLVCTEGEKLDVRQALILKQFGIAASEFKVKVPAYYDNDSSTVES 230
>gi|402913580|ref|XP_003919261.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Papio anubis]
Length = 126
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%)
Query: 65 FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF 124
FFGKNKVM ALG+S DE + N+H VS L+G+ GLLFTNR+K++V WF Y + D+
Sbjct: 1 MFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 60
Query: 125 AKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGV 166
A++G + V L GPL +FPHS+EPQLRQLGL T L +G+
Sbjct: 61 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTTLKRGM 102
>gi|402590649|gb|EJW84579.1| ribosomal protein L10 [Wuchereria bancrofti]
Length = 340
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 74/115 (64%)
Query: 73 MAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
MA ALGK+ E + ++ +S LKG+CGL+FTN D V +F+ DFA+ G +
Sbjct: 1 MAIALGKTSSTEYARGLNKISGLLKGECGLMFTNEDHDSVKKYFNEMYMSDFARCGQTAI 60
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
VEL EGPL +FP S+EPQLR+LGL T L KGVVTL + +CK GD LT +Q
Sbjct: 61 STVELCEGPLTQFPFSLEPQLRKLGLPTKLEKGVVTLISHYVICKDGDKLTADQC 115
>gi|255713404|ref|XP_002552984.1| mRNA turnover protein MRT4 [Lachancea thermotolerans CBS 6340]
gi|238934364|emb|CAR22546.1| KLTH0D06050p [Lachancea thermotolerans CBS 6340]
Length = 238
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ +A++ + ++V + ++R L+++R+ W
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTFRFVWVLHLDDVRTPVLQEIRSAW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ +LG+ +E+E ++NI +S G GLLFT+ V +F Y
Sbjct: 61 VGSKLIMGKRKVLQKSLGEKREEEYKENIFALSKLCSGVTGLLFTDEEPQVVQEYFKSYV 120
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLR-QLGLQTNLNKGVV 167
D+++ + E+ G + + P HS+EP LR + + T + G +
Sbjct: 121 RADYSRPKSKAPLTFEIPAGIIYSRGGQIPAEDDVPMVHSLEPTLRNKFMIPTKIKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
T+ + VC +G+ L QA ILK A+F+V + +Y+ + + E +
Sbjct: 181 TIESPYLVCTEGETLDVRQALILKQFGVAAAEFRVKVAAYYDNETSSVETV 231
>gi|340959551|gb|EGS20732.1| hypothetical protein CTHT_0025680 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 226
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 84/140 (60%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR + L + KKG E K+ L + + + KY + FVFSV NMRN+ LKDVR++
Sbjct: 1 MPKSKRARVYHLIQVNKKGREAKERLFSNIRETIPKYQHCFVFSVDNMRNNYLKDVRHEL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D R FFGK K+MA ALG + E+E +H ++ L G GLLFTNR D+ +F
Sbjct: 61 NDCRIFFGKTKLMARALGTTPEEEQADGLHRLTRYLTGTVGLLFTNRDPADIESYFSNLS 120
Query: 121 DEDFAKSGFISTEDVELKEG 140
DFA++G ++ V + G
Sbjct: 121 QVDFARAGTVAPRTVTVPTG 140
>gi|322782525|gb|EFZ10474.1| hypothetical protein SINV_15248 [Solenopsis invicta]
Length = 109
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 81/109 (74%), Gaps = 5/109 (4%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
V+L+KT +KGL KQ + +++ K VE+YN IF+ SVQN RN+KL ++R +WKDS+ FGK
Sbjct: 1 VSLTKTNRKGLVLKQRIIEDVKKCVEEYNRIFLISVQNTRNTKLLELRAEWKDSKLLFGK 60
Query: 70 NKVMAYALGKSQEDEIEKNIHVVSSA-----LKGQCGLLFTNRSKDDVL 113
+++A LG S+E EI +NIH +++A +KGQCGLLFTNRSK VL
Sbjct: 61 LRIIAMGLGISKETEIAENIHKLANAMKNCSMKGQCGLLFTNRSKKQVL 109
>gi|443917464|gb|ELU38179.1| ribosomal l10 domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 400
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 49/210 (23%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+K+ +VFSV +MRN+ LKD+R WK + R F +N VM A+G + E+E+ +HVV
Sbjct: 46 AQKWKYAWVFSVGDMRNAALKDIRTQWKGTGRMFCARNTVMVKAIGSTPEEEVRPGLHVV 105
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG------------ 140
+ GL+ Y K+GF S K G
Sbjct: 106 TKVSNYAAGLVM--------------YLPTRLQKAGFCSCWKCSYKGGCTPRRCAVQYPH 151
Query: 141 ------------------PLPEFP----HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178
P P+ P H++EP+LRQLGL T L +GV T+ H VCK
Sbjct: 152 QLTELIVSVILGPVCDQTPSPDPPTPLAHALEPRLRQLGLSTRLVRGVPTISAPHVVCKD 211
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
G LT EQA +L+LL +M +F++ W+
Sbjct: 212 GQQLTAEQAALLRLLGIQMTEFRIKCICWW 241
>gi|344232416|gb|EGV64295.1| hypothetical protein CANTEDRAFT_113948 [Candida tenuis ATCC 10573]
gi|344232417|gb|EGV64296.1| hypothetical protein CANTEDRAFT_113948 [Candida tenuis ATCC 10573]
Length = 217
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 117/209 (55%), Gaps = 1/209 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KKG E K+ + DE+ A++++ +FV + ++R L+++R+DW
Sbjct: 1 MPRSKRSKLVTLAQTDKKGKENKERIFDEVRSALDEFKYVFVLRLDDVRTPVLQEIRSDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
SR GK +V+ ALG + +E + ++H +S G GLLFTN + V +F+ Y
Sbjct: 61 AGSRLILGKRRVLEKALGDTTAEEYKDDLHQLSKLCDGVVGLLFTNEEINTVEDYFNAYT 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
+D++++ + D + EG + I + + + +L + + FK T K GD
Sbjct: 121 KQDYSRAKTRAPIDFTIPEGIVYSRGGQISIE-EDVTMSHSLEETLRNKFKIPTKMKSGD 179
Query: 181 VLTPEQARILKLLKKKMAKFKVLLYLWYN 209
VL QA ILK ++FKV + +Y+
Sbjct: 180 VLDVRQALILKQFGIAASEFKVQMLGYYD 208
>gi|414586605|tpg|DAA37176.1| TPA: hypothetical protein ZEAMMB73_064685 [Zea mays]
Length = 115
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 73/115 (63%)
Query: 73 MAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
M ALG+ DE E +H +S L+G GL FTN +DDV F +E+ DFA++G +
Sbjct: 1 MQIALGRPPADEAETGLHKLSKFLQGNSGLFFTNLPRDDVERMFREFEEHDFARTGCTAA 60
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
+ VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++G L PE A
Sbjct: 61 DTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEEGKPLAPEAA 115
>gi|225711938|gb|ACO11815.1| mRNA turnover protein 4 homolog [Lepeophtheirus salmonis]
Length = 143
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 86/121 (71%), Gaps = 5/121 (4%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKRDKKV+L+KT KK GLE K+ L D++ ++++ Y +F+F +N RN L+ +R +
Sbjct: 1 MPKSKRDKKVSLTKTDKKVGLESKRALVDKIRESLDAYTRVFIFETENARNLHLQKIRRE 60
Query: 60 WKD----SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
WK+ S FF GKN+VM+ ALG+S E+E+ +H +S+ L GQ GLLFTN + DD L +
Sbjct: 61 WKEDKGGSVFFMGKNRVMSLALGRSAEEEVGPGLHKISALLNGQRGLLFTNETLDDSLDY 120
Query: 116 F 116
F
Sbjct: 121 F 121
>gi|123505551|ref|XP_001329001.1| MGC89995 protein [Trichomonas vaginalis G3]
gi|121911951|gb|EAY16778.1| MGC89995 protein, putative [Trichomonas vaginalis G3]
Length = 211
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 6/214 (2%)
Query: 4 SKRDK-KVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD 62
S+R+ +V KT ++ ++R + +R+ AV K++ I+V + +R +++
Sbjct: 2 SRRETGRVNQKKTKEEKVQRGEAIRE----AVTKFDRIYVLRFSSESTEPQTALRRNFRS 57
Query: 63 SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE 122
S K ++++++G + E E + + L G GL TN + V +
Sbjct: 58 SNLCRDKKTIISHSIGATPETEARPGLSGLLQYLAGNTGLFMTNEDDNTVREYLQSMTQP 117
Query: 123 DFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVL 182
+FAK+GFI+TED + EGPLP+F S++ LR+LGL L G + +DH VC G+ L
Sbjct: 118 EFAKAGFIATEDFTVPEGPLPQFTFSMDGYLRELGLPVQLENGTIFNVRDHKVCTAGEPL 177
Query: 183 TPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTF 215
T QA++LK KM +KV + +WYN + F
Sbjct: 178 TKNQAQLLKHFNIKMDTYKVEPVAVWYNGEVKAF 211
>gi|414868179|tpg|DAA46736.1| TPA: hypothetical protein ZEAMMB73_070633 [Zea mays]
Length = 157
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 82/140 (58%)
Query: 73 MAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
M LG+ DE + +H +S L+G GL FTN +DDV F +E+ DFA++G +
Sbjct: 1 MQIGLGRPPADEAKTGLHKLSKFLQGNSGLFFTNLPRDDVERMFREFEEHDFARTGCTAV 60
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ VELKEGPL +F H +EP LR+ GL LNKGVV L DH VC++G L+P +L
Sbjct: 61 DTVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVVELVADHVVCEEGKPLSPSLRENRRL 120
Query: 193 LKKKMAKFKVLLYLWYNKKE 212
+MA F + L ++ E
Sbjct: 121 HGIQMATFHLYLVCRWSSDE 140
>gi|385301386|gb|EIF45578.1| mrna turnover protein 4 [Dekkera bruxellensis AWRI1499]
Length = 250
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 127/223 (56%), Gaps = 14/223 (6%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL+KT KKG K + D++ KA++ + ++ ++ +R ++D+R DW
Sbjct: 1 MPRSKRSKLVTLAKTEKKGRANKVRIFDDVRKALDTHRYVWALDLEGLRTPDMQDLRRDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA-LKGQCGLLFTNRSKDDVLMWFDVY 119
S+ GK KV+ ALG++ E+E + N++ ++ G G LFT+ + + V +F Y
Sbjct: 61 TGSKLILGKKKVLRKALGETPEEEYKDNLNELTDYDSDGFVGYLFTDETPETVEAYFRAY 120
Query: 120 EDEDFAKS------GFISTEDVEL-KEGPLP---EFP--HSIEPQLR-QLGLQTNLNKGV 166
F+++ F+ E + + G +P + P H++EP LR + + T + KG
Sbjct: 121 VKTGFSRAKSKSPITFVVPEGILYSRAGQIPVEEDVPMQHTMEPMLRNKFEMPTKIVKGK 180
Query: 167 VTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+TL + + V K+G+VL+ +QA ILK A+F+V + +++
Sbjct: 181 ITLTESYPVVKEGEVLSVKQALILKTFGVAAAEFRVKMLAYHD 223
>gi|313243021|emb|CBY39734.1| unnamed protein product [Oikopleura dioica]
Length = 212
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Query: 65 FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF 124
F+ GKNK+ A GKS+E E + +H S +L G+ GLLFTN+ +++V+ +F+ Y +
Sbjct: 1 FYLGKNKLCQVAFGKSKELEAAEGLHKFSQSLAGETGLLFTNKKEEEVVEYFNKYNSASY 60
Query: 125 AKSGFISTEDVELKEGPLPEFPHSIEPQLRQ-LGLQTNLNKGVVTLFKDHTVCKKGDVLT 183
A+ G S V++ GPLP+F +IE LR+ L L T L GVVTL +D + K G+ +T
Sbjct: 61 ARVGEKSEVTVKVVAGPLPQFSFAIEGHLRERLKLPTALKDGVVTLMQDFFLAKDGEAIT 120
Query: 184 PEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
+Q+R+LKL + F V L +NK+ G
Sbjct: 121 AQQSRLLKLFGCAITTFNVKLTKMWNKESG 150
>gi|448086101|ref|XP_004196020.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
gi|359377442|emb|CCE85825.1| Piso0_005460 [Millerozyma farinosa CBS 7064]
Length = 232
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 125/224 (55%), Gaps = 13/224 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+SKR K VTL++T KK K + D++ A++ Y ++V + ++R L+++RNDW
Sbjct: 1 MPRSKRSKLVTLAQTEKKDRSNKVRIFDDVRSALDTYRYVWVLKLDDVRTPVLQEIRNDW 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
S+ GK KV+ ALG S E+E + ++ +SS+L G GLLFT+ + + V +F+ Y
Sbjct: 61 TGSKLILGKRKVLVKALGDSPEEEYKDDLSKISSSLSGMSGLLFTDETPETVQAYFNAYT 120
Query: 121 DEDFAKSGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVV 167
+DF+++ + D + G P+ E HS+E LR + + T + G +
Sbjct: 121 RQDFSRAKSSAPIDFTIPSGVVYSRGGQIPIEEDVPMSHSLEETLRNKYLMPTKMKAGKI 180
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
L + + VCKKGD L QA ILK ++FKV + +++ K
Sbjct: 181 VLDEPYVVCKKGDTLDVRQALILKQFGVAESEFKVPIIAYFDGK 224
>gi|212723410|ref|NP_001132573.1| ribosomal protein L10 homolog [Zea mays]
gi|194694772|gb|ACF81470.1| unknown [Zea mays]
gi|414882022|tpg|DAA59153.1| TPA: hypothetical protein ZEAMMB73_797802 [Zea mays]
Length = 116
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 1 MPKSKRDKKVTLSKTVKK-GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59
MPKSKR++ VTLSKT KK GLERK + E+ AV+KY++ +VF+ NMRN KLKD+R
Sbjct: 1 MPKSKRNRPVTLSKTKKKPGLERKGKVVAEIKDAVDKYSSAYVFTYDNMRNQKLKDLREQ 60
Query: 60 WK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDV 112
K SR F KVM ALG+S DE + +H +S L+G GLLFTN +DDV
Sbjct: 61 LKSSSRIFLAGKKVMQIALGRSPADEAKTGLHKLSKFLQGNSGLLFTNLPRDDV 114
>gi|116207862|ref|XP_001229740.1| mRNA turnover protein MRT4 [Chaetomium globosum CBS 148.51]
gi|88183821|gb|EAQ91289.1| hypothetical protein CHGG_03224 [Chaetomium globosum CBS 148.51]
Length = 246
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 114/239 (47%), Gaps = 53/239 (22%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKR K L++ KK E+K L ++NI +D+
Sbjct: 1 MPKSKRSKVFHLTQVTKKTREQKDKL----------FSNI-------------RDI---- 33
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
FFGK K+ A ALG + ED I ++ L G GLLFTNR+ + +F
Sbjct: 34 -----FFGKTKLTARALGTTPEDAQADGIDQLTRYLAGSVGLLFTNRAPAAIQSYFASLT 88
Query: 121 DEDFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVT 168
DFA++G +++ V + G + E P H++EP+LR+LG+ T + KG V
Sbjct: 89 HVDFARAGTVASRTVTVPPGLVYSTGGEVPAEHDVPVAHTLEPELRRLGMPTRMVKGKVC 148
Query: 169 LFKD---------HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL 218
L D +T+C++G+VL Q R+LKL M++F+V L +++ G L
Sbjct: 149 LGGDESGEGSAEGYTICREGEVLDSRQTRLLKLFSVCMSEFRVGLLAYWSAASGEVTEL 207
>gi|171686394|ref|XP_001908138.1| hypothetical protein [Podospora anserina S mat+]
gi|170943158|emb|CAP68811.1| unnamed protein product [Podospora anserina S mat+]
Length = 229
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 23/168 (13%)
Query: 63 SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE 122
R FFGK K+ ALG + E+ IH+++ L G GL+FTNR+ +++ +F+
Sbjct: 7 GRLFFGKTKLTLRALGSTPEEAQADGIHLLAPYLTGSVGLIFTNRTPEEIKSYFESLTQV 66
Query: 123 DFAKSGFISTEDVELKEGPL----PEFP--------HSIEPQLRQLGLQTNLNKGVVTLF 170
DFA++G ++T D + +G + E P H++EP+LR+LG+ + KG V L
Sbjct: 67 DFARAGSVATRDFVIPKGLVYSTGGEVPKEHDVPVAHTLEPELRRLGVPCRMVKGKVCLG 126
Query: 171 KD----------HTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
D +TVCK+G+VL Q R+LKL MA+FKV LL +W
Sbjct: 127 VDEEGNGFQEEGYTVCKEGEVLDSRQTRLLKLFSVCMAEFKVELLAVW 174
>gi|444725212|gb|ELW65787.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 319
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
WF Y + D+A++G + L GPL + PHS+EPQLRQLGL T L +G +TL D+
Sbjct: 32 WFMKYVEMDYARAGNKAAFTASLDPGPLEQSPHSLEPQLRQLGLPTALKRGALTLLSDYE 91
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFEN 217
VCK+GDVL P+QAR+LKL +MA+FKV + Y+W + + G F+
Sbjct: 92 VCKEGDVLMPKQARVLKLSGYEMAEFKVTMKYVW-DAQLGRFQQ 134
>gi|209879772|ref|XP_002141326.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556932|gb|EEA06977.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 223
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 12/218 (5%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M +S+R + L K K ER +L +++ + + I+V +QN RNS LK R
Sbjct: 1 MARSRRVRLSALVKDKDKRKERNIDLINKVRECCTCFKYIYVVILQNQRNSLLKLFRKKL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
D F FGKNKV+ ALG +DEI NI +S LKG+ L+F+N +++ +
Sbjct: 61 GDGHFIFGKNKVLRLALGVKPQDEINNNISSISQLLKGERALIFSNLIPSEMMKICEDSS 120
Query: 121 DEDFAKSG------FISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+F ++G ++ T +KE P ++ L +LGL+T + L D T
Sbjct: 121 SLEFGRTGSIPGISYVLTAGCNIKEK--LTLPDTV---LHKLGLETRIQGENYELVSDFT 175
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKK 211
VC+ G LT +QA++LK L + KF++++ WY+ K
Sbjct: 176 VCETGVPLTNKQAQVLKYLGIQTVKFEIIIEAFWYDGK 213
>gi|401407314|ref|XP_003883106.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117522|emb|CBZ53074.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 186
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 112/220 (50%), Gaps = 52/220 (23%)
Query: 1 MPKSKRDKKVTLSKTVK-----KGLERKQNLRDELVKAVEKYN-NIFVFSVQNMRNSKLK 54
MP SKR+K V+L+K K +G E K+ D + E+ N ++++ N RNS LK
Sbjct: 1 MPVSKRNKVVSLTKVKKQKNSERGREVKEQWMDSVRSVCEEENQHVYLVEFVNQRNSLLK 60
Query: 55 DVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
VR+ K RF D+++ + V +
Sbjct: 61 LVRDLIKPGRF----------------ADKLQALLRKVQA-------------------- 84
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEG--PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKD 172
++FA++GF++T+ ++LKEG L +FPHS+E + R LGL T L G + L D
Sbjct: 85 -------KEFARAGFVATQSMQLKEGSDALAQFPHSLEQRFRSLGLPTLLKDGKILLLGD 137
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKK 211
+TVC KG+ LTPEQA++LK L KMA+F + LL W+ +
Sbjct: 138 YTVCTKGEPLTPEQAQVLKHLGVKMAEFHIKLLAEWHQGR 177
>gi|256074823|ref|XP_002573722.1| mRNA turnover protein 4 mrt4 [Schistosoma mansoni]
Length = 257
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKA-VEKYNNIFVFSVQNMRNSKLKDVRND 59
MP S+RDKKV L++ +K ++K L+ V+ V++Y ++V ++QN R K+ ++R
Sbjct: 1 MPISRRDKKVELTQVLKHAPKKKNTLQSFKVRQYVDEYRRVYVVTLQNPRTQKVSEIRKS 60
Query: 60 WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY 119
+ FG NKV ALGK+ ED +H++S LKGQC LLF+ S ++ D +
Sbjct: 61 MAKIKLLFGVNKVTTLALGKTHEDSYRPKLHLLSKYLKGQCALLFSRSSPAELREQLDAF 120
Query: 120 EDEDFAKSGFISTEDVELKEGPL 142
++++ G I+ + V LK L
Sbjct: 121 RSSEYSRPGVIAEQTVSLKISSL 143
>gi|444730936|gb|ELW71305.1| Casein kinase I isoform gamma-1 [Tupaia chinensis]
Length = 491
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MPKSKRD KV+L+KT KKGLE KQNL +EL K V+ +F+FS+ NMRNSKLKD+ N W
Sbjct: 1 MPKSKRDNKVSLTKTAKKGLELKQNLIEELWKCVDTSKYLFIFSMANMRNSKLKDIWNAW 60
Query: 61 KDSRFFFGKNKV 72
S+ F GKNKV
Sbjct: 61 THSQMFSGKNKV 72
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%), Gaps = 2/43 (4%)
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTFE 216
VCK+GDVLTPEQA++LKL +MAKFKV + Y+W + + G F+
Sbjct: 72 VCKEGDVLTPEQAQVLKLFGYEMAKFKVTMKYMW-DAQSGRFQ 113
>gi|156101529|ref|XP_001616458.1| 60S acidic ribosomal protein PO [Plasmodium vivax Sal-1]
gi|148805332|gb|EDL46731.1| 60S acidic ribosomal protein PO, putative [Plasmodium vivax]
Length = 221
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 121/215 (56%), Gaps = 8/215 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDE----LVKAVEKYN-NIFVFSVQNMRNSKLKD 55
MPKSKR+ +T+S T K K+ L+D+ L K ++ N I++ V+ N+ LK
Sbjct: 1 MPKSKRN--ITISLTKVKKKLNKKELKDQKLSDLKKIIQVPNIYIYILDVRTYSNNNLKQ 58
Query: 56 VRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
+K + RFF GKNK+M ALG S++DE + N+ V+ L G LL T V+
Sbjct: 59 AIEYFKPNGRFFIGKNKLMKLALGTSEKDEAKPNVCKVAELLVGNRILLITKDPPLKVIK 118
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+F+ ++ E++ K G I T++V LK G + P S++ L++ + ++ + + KD
Sbjct: 119 FFNEFQPEEYIKPGNICTQNVTLKFGDVLNVPVSMQKDLQKRKVTFDIVDQKIVIRKDKV 178
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+ +K +++ E A++L++L K+A F + + ++N
Sbjct: 179 LAEKDKLVSAENAKLLRMLNMKIANFDITVLGYWN 213
>gi|83316026|ref|XP_731047.1| ribosomal protein L10 [Plasmodium yoelii yoelii 17XNL]
gi|23490962|gb|EAA22612.1| Ribosomal protein L10, putative [Plasmodium yoelii yoelii]
Length = 224
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 124/216 (57%), Gaps = 10/216 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKY---NNIFVFS--VQNMRNSKLKD 55
MPKSKR+ + +S T K K+ L+D+ + ++KY N+++++ ++ N+ LK
Sbjct: 1 MPKSKRN--IAISLTKVKKKLNKKELKDQKLSELKKYASTQNVYIYALDIRTHSNNNLKK 58
Query: 56 VRNDWKDS--RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVL 113
V +K S +FF GKNK+M ALG ++DEI+ NI +S L G LL T V+
Sbjct: 59 VIEYFKPSGGKFFIGKNKLMKLALGDDEKDEIKPNISKISELLVGNRILLITKDEPLKVI 118
Query: 114 MWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
+F+ ++ E++ G IS E+V LK G + P S++ L++L + ++ + + +D
Sbjct: 119 KFFNEFQPEEYIIHGNISKENVILKCGDVLNVPVSMQKDLQKLKVNFDIVDQKIIIKEDK 178
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWY 208
+ +K +++ E A++L++L K+ KF + +L W+
Sbjct: 179 VLAEKDKLVSLESAKLLRMLNMKIGKFDISVLAYWH 214
>gi|344235122|gb|EGV91225.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 117
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 92 VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
VS L+G+ GLLFTNR+K++V WF Y + DFA++G +T V L GPL +FPHS+EP
Sbjct: 8 VSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLEQFPHSMEP 67
Query: 152 QLRQLGLQTNLNKG 165
QLRQLGL T L KG
Sbjct: 68 QLRQLGLPTALKKG 81
>gi|124514062|ref|XP_001350387.1| ribosome biogenesis protein MRT4, putative [Plasmodium falciparum
3D7]
gi|23615804|emb|CAD52796.1| ribosome biogenesis protein MRT4, putative [Plasmodium falciparum
3D7]
Length = 222
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERK-QNLRDELVKAVEKYNNIFVF--SVQNMRNSKLKDVR 57
MPKSKR+ K++L+K KK +++ ++L+ +K + + N++V+ ++ N+ LK
Sbjct: 1 MPKSKRNVKISLTKVKKKVNKKEMKDLKLLEIKKMIQIPNVYVYVLDIRTYSNNNLKVAI 60
Query: 58 NDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWF 116
+K + +FF GKNK+M ALG ++ +E++ N+ +S L G LL T VL +F
Sbjct: 61 EHFKPNGKFFIGKNKLMKLALGINENNEVKPNMSKISELLIGNRILLITKDGPLSVLKFF 120
Query: 117 DVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVC 176
+ ++ E++ K G IS +D+ LK G + P S++ L++ L ++ + L ++ +
Sbjct: 121 NEFQPEEYIKHGNISPQDITLKCGEVLNVPVSMQKDLQKRKLNFDIVDQKIILKENKVLA 180
Query: 177 KKGDVLTPEQARILKLLKKKMAKFKV-LLYLWY 208
+K +++ E ++IL++L K+A F + +L WY
Sbjct: 181 EKDKLISLENSKILRMLNMKIAFFDITVLGYWY 213
>gi|354508260|ref|XP_003516171.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Cricetulus
griseus]
Length = 73
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%)
Query: 92 VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
VS L+G+ GLLFTNR+K++V WF Y + DFA++G +T V L GPL +FPHS+EP
Sbjct: 1 VSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLEQFPHSMEP 60
Query: 152 QLRQLGLQTNLNK 164
QLRQLGL T L K
Sbjct: 61 QLRQLGLPTALKK 73
>gi|68066140|ref|XP_675054.1| Ribosomal protein L10 [Plasmodium berghei strain ANKA]
gi|56494013|emb|CAH94410.1| Ribosomal protein L10, putative [Plasmodium berghei]
Length = 224
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 124/217 (57%), Gaps = 10/217 (4%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKY---NNIFVFS--VQNMRNSKLKD 55
MPKSKR+ VT+S T K K+ ++D+ ++K+ NI++++ ++ N+ LK
Sbjct: 1 MPKSKRN--VTISLTKVKKKLNKKEIKDQKFSELKKHASIQNIYIYALDIRTHSNNNLKK 58
Query: 56 VRNDWKDS--RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVL 113
V +K S +FF GKNK+M ALG ++ EI+ NI ++ L G LL T V+
Sbjct: 59 VIEYFKPSGGKFFIGKNKLMKLALGDDEKHEIKPNISKIAELLVGNRILLITKDEPLKVI 118
Query: 114 MWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173
+F+ ++ E++ G IS E++ LK G + P S++ L++L + ++ + + +D
Sbjct: 119 KFFNEFQPEEYIIHGNISKENIVLKCGEVLNAPVSMQKDLQKLKVNFDIVDQKIIIKEDK 178
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYN 209
+ +K +++ E A++L++L K+ KF + +L W++
Sbjct: 179 VLAEKDKLVSLENAKLLRMLNMKIGKFDISVLAYWHS 215
>gi|344236111|gb|EGV92214.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 91
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+EPQLRQ GL L KGVVTL D+ VCK+GDVLTPEQAR+LKL +MA+FKV + +
Sbjct: 1 MEPQLRQQGLPIALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMW 60
Query: 209 NKKEGTFENL 218
+ K G F+ +
Sbjct: 61 DAKSGRFQKM 70
>gi|389584376|dbj|GAB67108.1| 60S acidic ribosomal protein PO [Plasmodium cynomolgi strain B]
Length = 221
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 8/215 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELV---KAVEKYNNIFVF--SVQNMRNSKLKD 55
MPKSKR+ VT+S T K K+ L+D+ + K + + NIF++ V+ N+ LK
Sbjct: 1 MPKSKRN--VTISLTKVKKKLNKKELKDQKLSDLKKIIQVPNIFIYILDVRTYSNNNLKQ 58
Query: 56 VRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
+K + RFF GKNK+M ALG ++ E + N+ V+ L G LL T V+
Sbjct: 59 AIEYFKPNGRFFIGKNKLMKLALGTDEKTEAKPNVSKVAELLVGNRILLITKDPPLKVIK 118
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+F+ ++ E++ K G I T++V LK G + P S++ L++ + ++ + + +D
Sbjct: 119 FFNDFQPEEYIKPGNICTQNVTLKIGDVLNVPVSMQKDLQKRKVTFDIVDQKIVIREDKI 178
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+ +K +++ E A++L++L K+A F + + ++N
Sbjct: 179 LAEKDKLVSTENAKLLRMLNMKIANFDITVLGYWN 213
>gi|221057406|ref|XP_002261211.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247216|emb|CAQ40616.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 221
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 119/215 (55%), Gaps = 8/215 (3%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDE----LVKAVEKYN-NIFVFSVQNMRNSKLKD 55
MPKSKR+ VT+S T K K+ L+D+ L K ++ N I++ V+ N+ LK
Sbjct: 1 MPKSKRN--VTISLTKVKKKLNKKELKDQKLSDLKKIIQVPNIYIYILDVRTYSNNNLKQ 58
Query: 56 VRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLM 114
+K + RFF GKNK+M ALG ++ E + N+ V+ L G LL T V+
Sbjct: 59 AIEYFKPNGRFFIGKNKLMKLALGTDEKSEAKPNVCKVAELLVGNRILLITKDPPLKVIK 118
Query: 115 WFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174
+F+ ++ E++ K G I T++V LK G + P S++ L++ + ++ + + +D
Sbjct: 119 FFNDFQPEEYIKPGNICTQNVTLKTGDVLNVPVSMQKDLQKRKVTFDIVDQKIVIREDKI 178
Query: 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
+ +K +++ E A++L++L K+A F + + ++N
Sbjct: 179 LAEKDKLVSAENAKLLRMLNMKIANFDITVLGYWN 213
>gi|432328067|ref|YP_007246211.1| ribosomal protein L10 [Aciduliprofundum sp. MAR08-339]
gi|432134776|gb|AGB04045.1| ribosomal protein L10 [Aciduliprofundum sp. MAR08-339]
Length = 332
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 98/164 (59%), Gaps = 5/164 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D+LV+ ++KY + + ++ N+ ++++ +R D KD + F GKN+++ AL KS +
Sbjct: 13 DQLVQLMDKYPVVGIVNINNIPAAQMQKMRRDLKDKAVFIVGKNRLIKLALEKSGK---- 68
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
KNI +++ ++GQ G++FT+ + + + E + AK G I+ ED+ + EG P P
Sbjct: 69 KNIKELANYIEGQTGIIFTDMNAFKLAKLLEKTETKAPAKGGEIAPEDIIVHEGETPFKP 128
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ + +++GL + KG + + KD + KKG+V++ + A++L
Sbjct: 129 GPMISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVL 172
>gi|291510256|gb|ADE10084.1| ribosomal protein L10 P0 [Tremella fuciformis]
Length = 117
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 128 GFISTEDVELKEGPL------P----EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
G ++ + L EGP+ P FPHS+EPQLRQLGL T L KGV L H +C+
Sbjct: 2 GAKASTSITLPEGPILTPYTEPASGDPFPHSMEPQLRQLGLATALVKGVPALNHPHALCR 61
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
G+ L+ EQ RILKLL +MA+F++ L ++K G
Sbjct: 62 DGEKLSSEQCRILKLLGVQMAEFRIHLGSRWSKDGG 97
>gi|254168992|ref|ZP_04875831.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|197622098|gb|EDY34674.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
Length = 334
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D+L K E+Y + V ++ N+ ++++ +R + KD + F GKN+++ AL K+ +
Sbjct: 13 DKLAKLAEEYPVVGVVNINNIPAAQMQKMRRNLKDKAVFIVGKNRLIKLALEKANK---- 68
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
KNI +++ ++GQ G++FTN + + + + + AK G I+ ED+ + G P P
Sbjct: 69 KNIKDLANYIEGQTGIIFTNINAFKLEKLMEETQTKAPAKGGEIAPEDIIVHAGETPFKP 128
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ + +++GL + KG + + KD + KKG+V++ + A++L
Sbjct: 129 GPMISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVL 172
>gi|254166650|ref|ZP_04873504.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|289596536|ref|YP_003483232.1| ribosomal protein L10 [Aciduliprofundum boonei T469]
gi|197624260|gb|EDY36821.1| ribosomal protein L10, putative [Aciduliprofundum boonei T469]
gi|289534323|gb|ADD08670.1| ribosomal protein L10 [Aciduliprofundum boonei T469]
Length = 334
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 95/164 (57%), Gaps = 5/164 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D+L K E+Y + + ++ N+ ++++ +R + KD + F GKN+++ AL K+ +
Sbjct: 13 DKLAKLAEEYPVVGIVNINNIPAAQMQKMRRNLKDKAVFIVGKNRLIKLALEKANK---- 68
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
KNI +++ ++GQ G++FTN + + + + + AK G I+ ED+ + G P P
Sbjct: 69 KNIKDLANYIEGQTGIIFTNINAFKLEKLMEETQTKAPAKGGEIAPEDIIVHAGETPFKP 128
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ + +++GL + KG + + KD + KKG+V++ + A++L
Sbjct: 129 GPMISEFQKVGLPAAVQKGKIVIRKDTVLVKKGEVISRDVAQVL 172
>gi|426258955|ref|XP_004023068.1| PREDICTED: mRNA turnover protein 4 homolog, partial [Ovis aries]
Length = 83
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 157 GLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEGTF 215
GL T L KGVVTL D+ VCK+GDVLTPEQAR+LKL +MA+FKV + Y+W + + G F
Sbjct: 1 GLPTALKKGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVSIKYMW-DAQSGRF 59
Query: 216 ENLLD--REKTPMDIYDMEDDENN 237
+ + D E P + E+D+++
Sbjct: 60 QQMGDDLPESAPQSECESEEDDDS 83
>gi|332158456|ref|YP_004423735.1| acidic ribosomal protein P0 [Pyrococcus sp. NA2]
gi|331033919|gb|AEC51731.1| acidic ribosomal protein P0 [Pyrococcus sp. NA2]
Length = 342
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQEDEI 85
+EL K ++ Y + + V +M L +R +++ +N ++ A+ ++ ++
Sbjct: 13 EELTKLIKSYPVVALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKRAAKELG 72
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
+ + ++ + G G+L TN + + + + AK G + +DV + GP P
Sbjct: 73 KPELEKLADYINGGAGILVTNMNPFKLYKFLEQNRQPAPAKPGAVVPKDVVIPAGPTPLT 132
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I Q++ +G+ + KG VT+ KD TV K G+V+TPE A IL L
Sbjct: 133 PGPIVGQMQAMGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNAL 180
>gi|66362748|ref|XP_628340.1| ribosomal protein of the PO/L10 family [Cryptosporidium parvum Iowa
II]
gi|46229393|gb|EAK90211.1| ribosomal protein of the PO/L10 family [Cryptosporidium parvum Iowa
II]
gi|323509133|dbj|BAJ77459.1| cgd7_1600 [Cryptosporidium parvum]
gi|323510217|dbj|BAJ78002.1| cgd7_1600 [Cryptosporidium parvum]
Length = 222
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 113/228 (49%), Gaps = 21/228 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M KSKR KKV ++K +KK + K + + + + + K+ I+V ++N RN+ LK +R
Sbjct: 1 MAKSKRVKKVLMTKDLKKKRKDKSEIIENVHEYIGKFKFIYVVKLKNQRNAALKQLRVRL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ + GKNK++ A G + E KN H +SS L+G+ GL+FT+ + ++ +
Sbjct: 61 EPGKLLVGKNKLLQVAFGADSDSESAKNAHKISSFLRGERGLIFTDLAPSNLNKVLEESS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIE----------PQLRQLGLQTNLNKGVVTLF 170
+F + G +S D+ P E + PQL+ L ++ K +
Sbjct: 121 TMEFGREGSLS--DITCVVEPNTELECLYKNAEFYMRKQFPQLKPTLLGSDQGKVI---- 174
Query: 171 KDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFEN 217
+C+KG+ L Q +LK L+ KF++ + +N++ FEN
Sbjct: 175 ----ICEKGNPLNKYQYLLLKHLEIPSVKFEIKPIACLHNEELTHFEN 218
>gi|300706387|ref|XP_002995464.1| hypothetical protein NCER_101630 [Nosema ceranae BRL01]
gi|239604580|gb|EEQ81793.1| hypothetical protein NCER_101630 [Nosema ceranae BRL01]
Length = 263
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 15 TVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVM 73
TVK+ RKQN ++ + YN+ + S+ N+ +++LK+++ W S F GKN +
Sbjct: 2 TVKESKVRKQNTYEKAKECFTSYNSFALVSMDNIVSNQLKEMKRAWGPSSTFLTGKNTAI 61
Query: 74 AYALGK-SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
AL + ++ED ++K ++G L+F V D++E E AK G I+
Sbjct: 62 RKALKELNREDLLDK--------VRGNISLIFFKEDVKKVKEVIDLFERESVAKVGDIAQ 113
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
DV +K + + LG+ T + KG + + +D V GD + P QA +L L
Sbjct: 114 SDVWIK-AHVTGMTSEKTGYFQTLGIPTKITKGKIEIMQDFLVLNDGDKVGPSQANLLAL 172
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+ K K+K+ ++ Y E +L+D
Sbjct: 173 INIKPFKYKMKIFSVYENGEFYDPSLID 200
>gi|392346595|ref|XP_231006.6| PREDICTED: uncharacterized protein LOC296512 [Rattus norvegicus]
Length = 1640
Score = 73.6 bits (179), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 17 KKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYA 76
KK L KQNL ++L + V Y +F+FSV NM N KL+D+ N WK +R FFGKNK+M A
Sbjct: 1220 KKALGLKQNLIEDLWRCVGAYKYLFIFSVANMSNGKLEDIHNAWKHNRMFFGKNKMMIVA 1279
Query: 77 LGKSQEDE 84
LG++ D+
Sbjct: 1280 LGRNPSDK 1287
>gi|268612239|pdb|3A1Y|G Chain G, The Structure Of Protein Complex
Length = 284
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQED-- 83
+EL K ++ Y I + V +M L +R +++ +N ++ A+ K+ ++
Sbjct: 13 EELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELG 72
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK + + G+L TN + + + AK G + +DV + GP
Sbjct: 73 KPELEKLVEYIDRG----AGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGP 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P P I Q++ LG+ + KG VT+ KD TV K G+V+TPE A IL L
Sbjct: 129 TPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNAL 180
>gi|67624595|ref|XP_668580.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659815|gb|EAL38378.1| hypothetical protein Chro.70189 [Cryptosporidium hominis]
Length = 222
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 21/228 (9%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
M KSKR KKV ++K +KK + K + + + + + K+ I+V ++N RN+ LK +R
Sbjct: 1 MAKSKRVKKVLMTKDLKKKRKDKSEIIENVHEYIGKFKFIYVVKLKNQRNAALKQLRVRL 60
Query: 61 KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYE 120
+ + GKNK++ A G + E KN H +SS L+G+ GL+FT+ + ++ +
Sbjct: 61 EPGKLLVGKNKLLQVAFGADSDSESAKNAHKISSFLRGERGLIFTDLAPSNLNKVLEESS 120
Query: 121 DEDFAKSGFISTEDVELKEGPLPEFPHSIE----------PQLRQLGLQTNLNKGVVTLF 170
+F + G +S D+ P E + PQL+ ++ K +
Sbjct: 121 TMEFGREGSLS--DITCVVEPNTELECLYKNAEFYMRKQFPQLKPTLFGSDQGKVI---- 174
Query: 171 KDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLWYNKKEGTFEN 217
+C+KG+ L Q +LK L+ KF++ + +N++ FEN
Sbjct: 175 ----ICEKGNPLNKYQYLLLKHLEIPSVKFEIKPIACLHNEELTHFEN 218
>gi|14591733|ref|NP_143821.1| acidic ribosomal protein P0 [Pyrococcus horikoshii OT3]
gi|6647747|sp|O74109.1|RLA0_PYRHO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=50S ribosomal protein L10E; AltName: Full=Anchor
protein P0; AltName: Full=L10E
gi|3258443|dbj|BAA31126.1| 342aa long hypothetical acidic ribosomal protein P0 (L10E)
[Pyrococcus horikoshii OT3]
Length = 342
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQED-- 83
+EL K ++ Y I + V +M L +R +++ +N ++ A+ K+ ++
Sbjct: 13 EELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELG 72
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK + + G+L TN + + + AK G + +DV + GP
Sbjct: 73 KPELEKLVEYIDRG----AGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGP 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P P I Q++ LG+ + KG VT+ KD TV K G+V+TPE A IL L
Sbjct: 129 TPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNAL 180
>gi|401837921|gb|EJT41766.1| MRT4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 170
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
GK KV+ ALG+ +E+E ++N+ +S G GLLFT+ + V +F Y D+++
Sbjct: 1 MGKRKVLQKALGEKREEEYKENLFQLSKLCSGVTGLLFTDEDVNTVKEYFQTYVRSDYSR 60
Query: 127 SGFISTEDVELKEGPL----------PEFP--HSIEPQLR-QLGLQTNLNKGVVTLFKDH 173
+ + EG + + P HS+EP +R + + T++ G +T+ +
Sbjct: 61 PNTKAPLTFTIPEGIVYSRGGQISVEEDVPMIHSLEPTMRNKFEIPTSIKAGKITIDSPY 120
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
VC +G+ L QA ILK ++FKV + +Y+ T EN
Sbjct: 121 LVCTEGEKLDVRQALILKQFGIAASEFKVKVSAYYDNDTSTVEN 164
>gi|337285273|ref|YP_004624747.1| acidic ribosomal protein P0 [Pyrococcus yayanosii CH1]
gi|334901207|gb|AEH25475.1| acidic ribosomal protein P0 [Pyrococcus yayanosii CH1]
Length = 342
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQED-- 83
+EL ++ Y I + V +M L +R ++++ KN ++ A+ K+ ++
Sbjct: 13 EELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENKGLLRVSKNTLIELAIKKAAQELG 72
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK I+ + +G G+L T + + + AK G ++ +D+ + GP
Sbjct: 73 KPELEKLINYI----EGGAGILVTEMNPFKLYKFLQQNRQPAPAKPGAVAPKDIVIPAGP 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P P + Q++ +G+ + +G VT+ KD V K G+V+TPE A IL L
Sbjct: 129 TPLSPGPLVGQMQAMGIPARIERGKVTIQKDTVVLKAGEVITPELANILNAL 180
>gi|323347818|gb|EGA82082.1| Mrt4p [Saccharomyces cerevisiae Lalvin QA23]
Length = 170
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 13/164 (7%)
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
GK KV+ ALG+ +E+E ++N++ +S G GLLFT+ + V +F Y D+++
Sbjct: 1 MGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSR 60
Query: 127 SGFISTEDVELKEG---------PLPE---FPHSIEPQLR-QLGLQTNLNKGVVTLFKDH 173
+ + EG P E HS+EP +R + + T + G +T+ +
Sbjct: 61 PNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKITIDSPY 120
Query: 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN 217
VC +G+ L QA ILK ++FKV + +Y+ T E+
Sbjct: 121 LVCTEGEKLDVRQALILKQFGIAASEFKVKVSAYYDNBSSTVES 164
>gi|14521982|ref|NP_127459.1| acidic ribosomal protein P0 [Pyrococcus abyssi GE5]
gi|12229943|sp|Q9UXS5.1|RLA0_PYRAB RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|5459202|emb|CAB50688.1| rpl10E LSU ribosomal protein L10E [Pyrococcus abyssi GE5]
gi|380742623|tpe|CCE71257.1| TPA: acidic ribosomal protein P0 [Pyrococcus abyssi GE5]
Length = 341
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQEDEI 85
+EL ++ Y I + V +M L +R +++ +N ++ A+ K+ ++
Sbjct: 13 EELANLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAQELG 72
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
+ + ++ + G+L TN + + + AK G + +DV + GP P
Sbjct: 73 KPELEKLAEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVIPAGPTPLA 132
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I Q++ +G+ + +G VT+ KD TV K G+V+TPE A IL L
Sbjct: 133 PGPIVGQMQAMGIPARIERGKVTIQKDTTVLKAGEVITPELANILNAL 180
>gi|390337310|ref|XP_003724527.1| PREDICTED: uncharacterized protein LOC100893395 [Strongylocentrotus
purpuratus]
Length = 138
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 153 LRQLGLQTN----LNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV-LLYLW 207
+ ++G+Q N L +G++ L +HTVCK GD LTPEQARILKL K MA+FK+ L W
Sbjct: 49 VEEIGVQVNVCALLGQGIIHLTSEHTVCKVGDTLTPEQARILKLFAKPMAEFKLKLAASW 108
Query: 208 YNKKEGTFENLLDREKTPMDIYDMEDDEN 236
N G FE + D D +DDE+
Sbjct: 109 SNN--GAFE-VFDDAPDSKSRSDGDDDED 134
>gi|326578111|gb|ADZ95699.1| 60S ribosomal protein P0 [Nosema bombycis]
Length = 263
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 15 TVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVM 73
+VK+ +RK N ++ + Y+ + S++N+ +S+LK+++ W D+ F GKN +
Sbjct: 2 SVKEMNKRKLNTYEKAKECFTTYSKFAIVSMENVISSQLKNLKKSWGSDAVFLTGKNSSI 61
Query: 74 AYALGK-SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
AL ++ED I+K +KG ++F ++ +V D E E AK G IS
Sbjct: 62 RRALQDLNKEDLIDK--------IKGNISIVFFSKDIKEVKKKIDDNERESVAKIGDISQ 113
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
DV +K G + + LG+ T + KG + + +D V GD + P Q +L L
Sbjct: 114 RDVWIK-GHITSMTSDKTGYFQTLGIPTKITKGKIEIMQDFKVLSPGDKVGPSQVNLLAL 172
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+ K ++K+ + Y + E +L+D
Sbjct: 173 INIKPFRYKMNILNIYEEGEFYDPSLID 200
>gi|360043847|emb|CCD81393.1| putative mrna turnover protein 4 mrt4 [Schistosoma mansoni]
Length = 219
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 49 RNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTN 106
++S K RN K +++ FG NKV ALGK+ ED +H++S LKGQC LLF+
Sbjct: 15 KSSHPKSFRNTKKHGENQLLFGVNKVTTLALGKTHEDSYRPKLHLLSKYLKGQCALLFSR 74
Query: 107 RSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
S ++ D + ++++ G I+ + V LK
Sbjct: 75 SSPAELREQLDAFRSSEYSRPGVIAEQTVSLK 106
>gi|126460439|ref|YP_001056717.1| acidic ribosomal protein P0 [Pyrobaculum calidifontis JCM 11548]
gi|126250160|gb|ABO09251.1| LSU ribosomal protein L10P [Pyrobaculum calidifontis JCM 11548]
Length = 344
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQ 81
RK + E + ++KY +F+F + + L + R + +G K++ L K
Sbjct: 18 RKVRIVQEATELLQKYQYVFLFDLHGLSARILGEYRYKLRP----YGAVKIIKPTLFKIA 73
Query: 82 EDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ + V ++ ++G+ G FTN + +V+ Y A+ G + D+ + G
Sbjct: 74 YAKVYGGVPVEIAEKVRGEVGFFFTNHNPAEVVKLVAKYAVRRAARPGDKAPFDIVIPAG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKMA 198
P P I + +L + T + +G + + KD V K G +TPE A +L++ ++
Sbjct: 134 PTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIFE 193
Query: 199 KFKVLLYLWYNKKEGTFENLL 219
+++ LW K+ E L+
Sbjct: 194 SLRLIGVLWKGKRFVPIEELI 214
>gi|119719140|ref|YP_919635.1| acidic ribosomal protein P0 [Thermofilum pendens Hrk 5]
gi|119524260|gb|ABL77632.1| LSU ribosomal protein L10P [Thermofilum pendens Hrk 5]
Length = 294
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 7/171 (4%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD--SRFFFGKNKVMAYALGK 79
RK L +EL +++Y V S+ + S +K R+ + S KN + AL
Sbjct: 16 RKAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN 75
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ K + + L+GQ ++FTN++ ++L + D + A++G I+T ++ L
Sbjct: 76 TG-----KYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPA 130
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G P + +LG+ T + +G + + KD V K GDV++PE A +L
Sbjct: 131 GNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELL 181
>gi|402584249|gb|EJW78191.1| hypothetical protein WUBG_10902, partial [Wuchereria bancrofti]
Length = 82
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 26 LRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDE 84
L DE+ K V+ Y ++F+F ++NMR+SK ++R +K +SRFF+GKN VMA ALGK+ E
Sbjct: 16 LVDEIRKCVDTYEHLFLFKIENMRSSKFIEIRQKYKNNSRFFYGKNNVMAIALGKTSSTE 75
Query: 85 IEKNIH 90
+ ++
Sbjct: 76 YARGLN 81
>gi|396081713|gb|AFN83328.1| 60S acidic ribosomal protein P0 [Encephalitozoon romaleae SJ-2008]
Length = 277
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 6/221 (2%)
Query: 4 SKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS 63
+KR+K T G ERK+ ++ K Y+ + ++N+ +++LKD++ W ++
Sbjct: 2 AKREKFFHPRMTKMDGKERKELTYEKAKKLFGTYSRFALVGIENVESTQLKDIKRQWGNN 61
Query: 64 -RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE 122
F GKN + A+ + E+ + V +KG +F D+ D E
Sbjct: 62 VEFLMGKNSAIKRAIADLGKPELSR----VLDLIKGDVCFVFFKGDARDIKKTIDENVRE 117
Query: 123 DFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVL 182
AK G I+ +DV + P + LG+ T + KG V + + V KGD +
Sbjct: 118 ACAKVGNIAQKDVWVDSCITGMTPDKTS-YFQVLGIATKITKGKVEIISPYKVLSKGDKV 176
Query: 183 TPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREK 223
P QA +L +L K +K+ ++ Y +L+D EK
Sbjct: 177 GPSQANLLGMLNIKPFSYKMTMHHVYEDGVVYDSSLIDIEK 217
>gi|401826989|ref|XP_003887587.1| 60S acidic ribosomal protein P0 [Encephalitozoon hellem ATCC 50504]
gi|392998593|gb|AFM98606.1| 60S acidic ribosomal protein P0 [Encephalitozoon hellem ATCC 50504]
Length = 266
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK 79
ERK+ + ++ + YN + ++N+ +++LKD++ W D F GKN + A+
Sbjct: 8 ERKEATYERAMRLFKTYNKFALVGIENVVSTQLKDIKRQWGSDVEFLMGKNSAIKRAMAD 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ EI + ++ KG +F D+ D E AK G ++ +DV +
Sbjct: 68 LGKPEITDILELI----KGDVCFVFFKGDVRDIKKAIDENVREACAKVGNVAQKDVWVDN 123
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
P + LG+ T + KG V + + V +GD + P QA +L +L K
Sbjct: 124 CITGMTPDK-TSYFQVLGIATKITKGKVEIISPYKVLSEGDRVGPSQANLLGMLNIKPFS 182
Query: 200 FKVLLYLWYNKKEGTFENLLDREK 223
+K+ ++ Y +L+D EK
Sbjct: 183 YKMTMHKVYENGVIYDSSLIDVEK 206
>gi|302853161|ref|XP_002958097.1| hypothetical protein VOLCADRAFT_84328 [Volvox carteri f.
nagariensis]
gi|300256565|gb|EFJ40828.1| hypothetical protein VOLCADRAFT_84328 [Volvox carteri f.
nagariensis]
Length = 321
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K++ R L + ++ Y+ F+ + N+ + + D+R + +S GKN +M Y + K
Sbjct: 9 QKKKDYRKRLAQYLQTYDKAFIVNADNVGSKQFMDIRKALRPNSVILMGKNTMMRYCVEK 68
Query: 80 SQEDEIEKNIHVV-----SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTED 134
E+ + + L+G G++FTN V Y+ A+ G + ED
Sbjct: 69 YLEETGDHRWECLVKPGKKGLLEGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGATANED 128
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
V +K G P S + LG+ T +NKG + + D V K GD + QA +L L
Sbjct: 129 VVIKAGGTGMDP-SQTSFFQALGIATKINKGTIEIVSDVVVVKTGDRVGASQATLLAKLG 187
Query: 195 KKMAKF 200
K K+
Sbjct: 188 IKPFKY 193
>gi|15679675|ref|NP_276792.1| acidic ribosomal protein P0 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3914774|sp|O27717.1|RLA0_METTH RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|2622811|gb|AAB86153.1| ribosomal protein Lp0 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 336
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
EL ++ Y + + ++ ++ +L+ +R +DS K +++ AL K+ E+E
Sbjct: 14 ELHDLIKGYEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGR-ELE- 71
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLPE 144
N+ +S ++GQ L+FT+ + F + ED AK G I+ +D+ + +G
Sbjct: 72 NVDSLSDYMEGQPALIFTDMNP---FKLFKILEDSKTPAPAKPGAIAPDDIVVPKGDTGF 128
Query: 145 FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
P I +L+Q+G+ + KG + + DH V K G+ + P+ A IL L + + + L
Sbjct: 129 APGPILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQPLEVGIDL 188
Query: 205 YLWY-NKKEGTFENL-LDREKTPMDI 228
Y N+ T + L +D EKT DI
Sbjct: 189 RAAYENQTVYTADVLTIDEEKTLSDI 214
>gi|159477927|ref|XP_001697060.1| acidic ribosomal protein P0 [Chlamydomonas reinhardtii]
gi|158274972|gb|EDP00752.1| acidic ribosomal protein P0 [Chlamydomonas reinhardtii]
Length = 320
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K+ R L + ++ Y+ F+ N+ + + D+R + + GKN +M + + K
Sbjct: 9 DKKKEYRQRLNQYLQTYDKAFIVHADNVGSRQFMDIRKALRPGAVILMGKNTMMRFCVEK 68
Query: 80 SQEDEIEKNIHVV-----SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTED 134
E+ + + L+G G++FTN V Y+ A+ G ++ ED
Sbjct: 69 YLEETGDHRWECLVKPGKKGLLEGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPED 128
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
V +K G P S + LG+ T +NKG + + D V K G+ + P QA +L L
Sbjct: 129 VVIKAGGTGMDP-SQTSFFQALGIATKINKGTIEIVSDVVVVKAGERVGPSQATLLAKLG 187
Query: 195 KKMAKFKVLL 204
K K+ +L+
Sbjct: 188 VKPFKYGLLI 197
>gi|440793419|gb|ELR14603.1| ribosomal protein L10, putative [Acanthamoeba castellanii str.
Neff]
Length = 329
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALG 78
+RK+ +L + Y + + + N+ +++L+ VR + + + GKN ++
Sbjct: 8 FQRKKEYFTKLSNLLVDYKKVLIVAANNVGSNQLQRVRQELRGKAVLLMGKNTMIR---- 63
Query: 79 KSQEDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
K + + KN + + +KG G +FTN D+ + + AKSG IS DV
Sbjct: 64 KCIRENLTKNPDLEALLPYVKGNVGFVFTNGDLSDMRTRIGAVKVKAAAKSGAISPCDVI 123
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP + P + L + T ++KGV+ + D + K+G +T QA +L++L +
Sbjct: 124 VPAGPTGQDPAKTS-FFQALTISTRISKGVIEIVNDVHLVKEGAKVTASQAALLQMLNIQ 182
Query: 197 MAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
++ + + Y+ D P+ + D+ DD+
Sbjct: 183 PFEYALAVKTVYD----------DGSVYPVSLLDITDDD 211
>gi|409096636|ref|ZP_11216660.1| acidic ribosomal protein P0 [Thermococcus zilligii AN1]
Length = 339
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL + ++ Y I + V + L +R+ ++ +N ++ A+ ++ ++ +
Sbjct: 13 EELTRIIKSYPVIALVDVAGVPAYPLSKMRDKFRGKAIIRVSRNTLIGIAIKRAAQELGK 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ ++ ++G +L T+ + + + + AK G + T+DV + GP P P
Sbjct: 73 PELAKLADYIQGGAAILATDINPFKLYKLLEESKIPAPAKPGAVVTKDVVIPGGPTPIAP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + KG VT+ D+ V K G V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIEKGKVTIQNDYPVLKAGGVITEQLARILNAL 179
>gi|390960573|ref|YP_006424407.1| acidic ribosomal protein P0/50S ribosomal protein L10 [Thermococcus
sp. CL1]
gi|390518881|gb|AFL94613.1| acidic ribosomal protein P0/50S ribosomal protein L10 [Thermococcus
sp. CL1]
Length = 339
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL K ++ Y I + V N+ L +R + +N ++ A+ K+ ++
Sbjct: 13 EELAKIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKKAAQELNN 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ + ++G G+L T + + + + AK G + DV + GP P
Sbjct: 73 PDLEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSLSP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + +G V++ KD+TV K G+V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIERGKVSIQKDYTVLKAGEVITDQLARILNAL 179
>gi|389851504|ref|YP_006353738.1| 50S ribosomal protein L10 [Pyrococcus sp. ST04]
gi|388248810|gb|AFK21663.1| rplJ, large subunit ribosomal protein L10 [Pyrococcus sp. ST04]
Length = 341
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQED-- 83
+EL ++ Y I + V +M L +R K++ +N ++ A+ K+ ++
Sbjct: 13 EELANLIKSYPVIALVDVSSMPAYPLSQMRRLIKENGGLLRVSRNTLIELAIKKAAQELG 72
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK I + +G G+L T + + + AK+G +DV + GP
Sbjct: 73 KPELEKLIDYI----QGGAGILVTTMNPFKLYKFLQQNRQPAPAKAGAKVPKDVVIPAGP 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P P + Q++ +G+ + +G VT+ KD V K G+ +TPE A IL L
Sbjct: 129 TPLTPGPLVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELATILNAL 180
>gi|241781370|ref|XP_002400422.1| mRNA turnover protein 4 mrt4, putative [Ixodes scapularis]
gi|215508570|gb|EEC18024.1| mRNA turnover protein 4 mrt4, putative [Ixodes scapularis]
Length = 57
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 65 FFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVL 113
F+FGKNKVMA ALG+ +++ +N+H VS L+GQCGL FTN K+ VL
Sbjct: 8 FYFGKNKVMAVALGRCIDEDHRENLHRVSERLRGQCGLFFTNAPKEKVL 56
>gi|402468519|gb|EJW03667.1| hypothetical protein EDEG_02016 [Edhazardia aedis USNM 41457]
Length = 203
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 37 YNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95
Y N+ + + R+S L+ +R+ + DS+ FGK K++ +L ++ +I K +++
Sbjct: 26 YKNLLLVEATDQRSSFLQKLRDLVRVDSKIIFGKRKMLIKSLEATKISKINK----LTTK 81
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL----PEFPHSIEP 151
+ G LLFTNR +++ + E + F + I +ED+ L G + + P E
Sbjct: 82 MAGSFFLLFTNRDAQEMVKFISEIEVKGFLRPNEICSEDIVLPSGIVKINDSDVPVDFEK 141
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA--KFKVLLYLWYN 209
LR+ + + +G V +++ +C+K + Q+++L++ ++A K KVL +N
Sbjct: 142 VLRRFNVPVVIQQGKVICQEEYKICEKDRKIDVSQSKLLRMFGYELAVLKLKVLEVFLFN 201
>gi|304314034|ref|YP_003849181.1| 50S ribosomal protein L10P [Methanothermobacter marburgensis str.
Marburg]
gi|302587493|gb|ADL57868.1| 50S ribosomal protein L10P [Methanothermobacter marburgensis str.
Marburg]
Length = 336
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
EL ++ + + + ++ ++ +L+ +R +DS K +++ AL K+ + E+E
Sbjct: 14 ELQDLIKSHEVVGIANLADIPARQLQKMRQTLRDSALIRMSKKTLISLALEKAGK-ELE- 71
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLPE 144
N+ +S ++GQ L+FT+ + F + ED AK G I+ D+ + +G
Sbjct: 72 NVDSLSDYMEGQPALIFTDMNP---FKLFKILEDSKTPAPAKPGAIAPADIVVPKGDTGF 128
Query: 145 FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
P I +L+Q+G+ + KG + + DH V K G+ + P+ A IL L + + + L
Sbjct: 129 APGPILGELQQIGIPAKIEKGKIVVSNDHVVVKAGEEIPPKVAGILTRLDIQPLEVGIDL 188
Query: 205 YLWYNKKEGTFENLL--DREKTPMDI 228
Y + ++L D EKT DI
Sbjct: 189 RAAYENQTVYTADILTIDEEKTLSDI 214
>gi|344249855|gb|EGW05959.1| mRNA turnover protein 4-like [Cricetulus griseus]
Length = 57
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIF-VFSVQNMRNSKLKDV 56
MP SKRDKKV+L+KT KGLE KQNL +E V +F +FS+ NMRNSKLKD+
Sbjct: 1 MPTSKRDKKVSLTKTANKGLELKQNLIEEFQNYVGTCKYLFIIFSMANMRNSKLKDI 57
>gi|22257021|sp|Q8TX50.2|RLA0_METKA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
Length = 357
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIE 86
EL + +++Y N+ + ++ + +L+++R + D+ +N +M AL + ++ E
Sbjct: 27 ELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPE 86
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + ++G +FTN + + + AK G I+ ED+ + EGP P P
Sbjct: 87 --LEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 144
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
I +L+Q GL + G V + KD + K+G+ + + A ILK K ++ +V + +
Sbjct: 145 GPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILK--KLEIEPMEVGVDI 202
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMED 233
EGT L +R+ +D + ED
Sbjct: 203 VAIVAEGT---LFERDDLAIDFDEYED 226
>gi|20094262|ref|NP_614109.1| acidic ribosomal protein P0 [Methanopyrus kandleri AV19]
gi|19887299|gb|AAM02039.1| Ribosomal protein L10 [Methanopyrus kandleri AV19]
Length = 362
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 9/207 (4%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIE 86
EL + +++Y N+ + ++ + +L+++R + D+ +N +M AL + ++ E
Sbjct: 32 ELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIALEEKLDERPE 91
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + ++G +FTN + + + AK G I+ ED+ + EGP P P
Sbjct: 92 --LEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 149
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
I +L+Q GL + G V + KD + K+G+ + + A ILK K ++ +V + +
Sbjct: 150 GPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILK--KLEIEPMEVGVDI 207
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMED 233
EGT L +R+ +D + ED
Sbjct: 208 VAIVAEGT---LFERDDLAIDFDEYED 231
>gi|290984558|ref|XP_002674994.1| predicted protein [Naegleria gruberi]
gi|284088587|gb|EFC42250.1| predicted protein [Naegleria gruberi]
Length = 328
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 21 ERKQNLRDELVKA----VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAY 75
+ KQ L+++ V++ ++KY I N+R+ ++ D+R + GKN +M
Sbjct: 12 DEKQKLKEQYVESFINMLDKYTKIIFVEANNVRSKQMADIRVGLRGKGELLMGKNTLMKK 71
Query: 76 ALGKSQEDEIEK---------NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
A+ K EK NI ++ LKG GL+FTN ++V Y+ AK
Sbjct: 72 AI-KVLTSAPEKYKSLAAQAANIAKIADLLKGNVGLVFTNNDLNEVKDVILSYKVGAPAK 130
Query: 127 SGFISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVL 182
G IS V ++ +EP + L + T + KG V + K+H + GD +
Sbjct: 131 QGAISPVKVVIQPAN-----TGLEPTKTSFFQALNINTKITKGTVEIIKEHILLNPGDKV 185
Query: 183 TPEQARILKLLKKKMAKFKVLLYLWYN 209
+A +L+LL K ++ ++L Y+
Sbjct: 186 GSSEAALLQLLNIKPFEYGLVLVNIYD 212
>gi|374630404|ref|ZP_09702789.1| LSU ribosomal protein L10P [Methanoplanus limicola DSM 2279]
gi|373908517|gb|EHQ36621.1| LSU ribosomal protein L10P [Methanoplanus limicola DSM 2279]
Length = 284
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+E+ + E+Y + + Q + S+++ +R + + S +N ++ +A E+
Sbjct: 17 EEIKRHAEEYKLVGLVDFQGIPASQMQQMRRNLRGSAVLKMTRNTLIEHAFA-----EMG 71
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
I +++ ++G L+FTN + + + AK G +S ED+ + +GP P
Sbjct: 72 GEIEGINNHIEGHSALIFTNENPFRLYKKLQETMTKMAAKPGEVSPEDITVPKGPTSFPP 131
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
I QL+Q G+ + G V + + TV K+G+V+ + A +L L K V L L
Sbjct: 132 GPIVGQLQQAGIPAAITGGKVVIRETKTVVKEGEVINAKMADVLSKLDIK--PIDVGLSL 189
Query: 207 WYNKKEGTF 215
EGTF
Sbjct: 190 QIAFYEGTF 198
>gi|240102545|ref|YP_002958854.1| acidic ribosomal protein P0 [Thermococcus gammatolerans EJ3]
gi|259491695|sp|C5A428.1|RLA0_THEGJ RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|239910099|gb|ACS32990.1| LSU ribosomal protein L10E (rpl10E) [Thermococcus gammatolerans
EJ3]
Length = 340
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL K ++ + I + V + L +R+ + +N ++ A+ ++ ++ +
Sbjct: 13 EELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNK 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ ++ ++G +L T + + + + AK G + +DV + GP P
Sbjct: 73 PDLEKLADYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPKDVVIPAGPTSLAP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + KG VT+ KD+TV K G+V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIEKGKVTIQKDYTVLKAGEVITEQLARILNAL 179
>gi|444706055|gb|ELW47417.1| mRNA turnover protein 4 like protein [Tupaia chinensis]
Length = 145
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 165 GVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL-YLWYNKKEG 213
VVTL + VC++GDVLTPEQARILKL +MA+FKV + Y+W + EG
Sbjct: 38 AVVTLLSHYEVCREGDVLTPEQARILKLSGYQMAEFKVAMKYMWNDSLEG 87
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFS 44
MPKSKRDK V+L+KT KKGLERKQNL +EL ++V+ + + S
Sbjct: 1 MPKSKRDKNVSLTKTTKKGLERKQNLIEELRESVDMSAVVTLLS 44
>gi|126178364|ref|YP_001046329.1| acidic ribosomal protein P0 [Methanoculleus marisnigri JR1]
gi|125861158|gb|ABN56347.1| LSU ribosomal protein L10P [Methanoculleus marisnigri JR1]
Length = 346
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
+E+ + +E++ + V + + S+++ +R + + +R +N ++ +AL +E+
Sbjct: 17 EEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHAL-----NELG 71
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ ++ +GQ L+FTN + + + + + AK G + ED+ + +GP P
Sbjct: 72 GSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKP 131
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
I +L+Q+G+ + G V + + TV KKG+V+ + A L L K ++L
Sbjct: 132 GPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQA 191
Query: 207 WY 208
Y
Sbjct: 192 AY 193
>gi|19074504|ref|NP_586010.1| 60S ACIDIC RIBOSOMAL PROTEIN P0 [Encephalitozoon cuniculi GB-M1]
gi|74621170|sp|Q8SRJ7.1|RLA0_ENCCU RecName: Full=60S acidic ribosomal protein P0; Short=A0; AltName:
Full=L10E
Length = 290
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 3 KSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK- 61
+ KR+K T K ERK+ + K E Y+ + ++N+ +++LKD++ W
Sbjct: 14 QPKREKFFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGG 73
Query: 62 DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYED 121
++ GKN + A+ + E+ V +KG +F + D+ D
Sbjct: 74 NAELLMGKNSAIRRAIADLGKPELSG----VYDLVKGDVCFVFFKGNARDIKKAIDENVR 129
Query: 122 EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDV 181
E AK G ++ DV ++ P + LG+ T + KG V + + V +GD
Sbjct: 130 EACAKVGNVAQRDVWVESCITGMTPDKTS-YFQALGIATKITKGKVEIISPYKVLSEGDK 188
Query: 182 LTPEQARILKLLKKKMAKFKVLLYLWY 208
+ P QA +L +L K +K+ ++ Y
Sbjct: 189 VGPSQANLLGMLNIKPFCYKMTMHQIY 215
>gi|212223327|ref|YP_002306563.1| acidic ribosomal protein P0 [Thermococcus onnurineus NA1]
gi|229564304|sp|B6YSX9.1|RLA0_THEON RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|212008284|gb|ACJ15666.1| LSU ribosomal protein L10E [Thermococcus onnurineus NA1]
Length = 339
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 11/172 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQED--- 83
+EL ++ Y I + V N+ L +R + +N ++ A+ ++ ++
Sbjct: 13 EELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGK 72
Query: 84 -EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK I H+ +G G+L T + + + + AK G DV + GP
Sbjct: 73 PELEKLIDHI-----QGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGP 127
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + +++ LG+ + KG V++ KD+TV K G+V+T + ARIL L
Sbjct: 128 TSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNAL 179
>gi|449329564|gb|AGE95835.1| 60S acidic ribosomal protein P0 [Encephalitozoon cuniculi]
Length = 290
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 3 KSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK- 61
+ KR+K T K ERK+ + K E Y+ + ++N+ +++LKD++ W
Sbjct: 14 QPKREKFFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGG 73
Query: 62 DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYED 121
++ GKN + A+ + E+ V +KG +F + D+ D
Sbjct: 74 NAELLMGKNSAIRRAIADLGKPELSG----VYDLVKGDVCFVFFKGNARDIKKAVDENVR 129
Query: 122 EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDV 181
E AK G ++ DV ++ P + LG+ T + KG V + + V +GD
Sbjct: 130 EACAKVGNVAQRDVWVESCITGMTPDKTS-YFQALGIATKITKGKVEIISPYKVLSEGDK 188
Query: 182 LTPEQARILKLLKKKMAKFKVLLYLWY 208
+ P QA +L +L K +K+ ++ Y
Sbjct: 189 VGPSQANLLGMLNIKPFCYKMTMHQIY 215
>gi|408402711|ref|YP_006860694.1| acidic ribosomal protein P0 [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408363307|gb|AFU57037.1| acidic ribosomal protein P0 [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 298
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K+ + EL + KYN I + + +R ++L +R ++ D + KNKV A K
Sbjct: 17 KKKRLMYQELQELPTKYNVIALSKMTKVRATQLMAIRKKFRNDVKIRIIKNKVAIRAFEK 76
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF--AKSGFISTEDVEL 137
+ I +S L+GQC L+FTN S + + F +++ F AK G I+T++V +
Sbjct: 77 VKGVA---GIENLSKQLEGQCALMFTNISPFKLNLIFA--QNKVFLPAKGGDIATKEVVV 131
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G P + + + + T +++G + + KD V K GDV++ + A +L
Sbjct: 132 PAGNTGIAPGPVLSEFKVANVPTKIDQGTIWVSKDTVVAKPGDVISMQLASLL 184
>gi|300521630|gb|ADK26026.1| r-protein L10p [Candidatus Nitrososphaera gargensis]
Length = 294
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K+ + EL + KYN I + + +R ++L +R ++ D + KNKV A K
Sbjct: 13 KKKRLMYQELQELPTKYNVIALSKMTKVRATQLMAIRKKFRNDVKIRIIKNKVAIRAFEK 72
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF--AKSGFISTEDVEL 137
+ I +S L+GQC L+FTN S + + F +++ F AK G I+T++V +
Sbjct: 73 VKGVA---GIENLSKQLEGQCALMFTNISPFKLNLIFA--QNKVFLPAKGGDIATKEVVV 127
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G P + + + + T +++G + + KD V K GDV++ + A +L
Sbjct: 128 PAGNTGIAPGPVLSEFKVANVPTKIDQGTIWVSKDTVVAKPGDVISMQLASLL 180
>gi|57641351|ref|YP_183829.1| acidic ribosomal protein P0 [Thermococcus kodakarensis KOD1]
gi|73917556|sp|Q5JH36.1|RLA0_PYRKO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|57159675|dbj|BAD85605.1| LSU ribosomal protein L10E [Thermococcus kodakarensis KOD1]
Length = 340
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL ++ Y I + V + L +R+ + +N ++ A+ ++ ++ +
Sbjct: 13 EELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQ 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + ++G +L T + + + + AK+G + +DV + GP P
Sbjct: 73 PELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + KG V++ KD+TV K G+V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNAL 179
>gi|303389937|ref|XP_003073200.1| 60S acidic ribosomal protein P0 [Encephalitozoon intestinalis ATCC
50506]
gi|303302345|gb|ADM11840.1| 60S acidic ribosomal protein P0 [Encephalitozoon intestinalis ATCC
50506]
Length = 266
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK 79
ERK+ + ++ + Y + ++N+ +++LK+++ W +D F GKN + A+
Sbjct: 8 ERKEQVYEKARRLFGTYTRFALVGIENVESTQLKNIKKGWGEDVEFLMGKNSAIKRAVAS 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ ++ + ++ KG +F DV D E AK G I+ +DV ++
Sbjct: 68 LENPKLSSILELI----KGDVCFVFFKGDVRDVKKAIDDNVREACAKVGNIAQKDVWVEN 123
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
P + LG+ T + KG V + + V GD + P QA +L +L K
Sbjct: 124 CITGMTPDK-TSYFQVLGIATKITKGKVEIISPYKVLSVGDKVGPSQANLLGMLNIKPFS 182
Query: 200 FKVLLYLWY 208
+K++++ Y
Sbjct: 183 YKMVMHQVY 191
>gi|429965003|gb|ELA47000.1| hypothetical protein VCUG_01531 [Vavraia culicis 'floridensis']
Length = 261
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERKQ L Y V + N+ +S+L+ + W+ + F FGKN + AL
Sbjct: 8 ERKQLLFTHTKDYFTHYTQFIVVGLNNVTSSQLQSAKQAWQGKAEFLFGKNTTIKKALRD 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++I I G +FTN ++ + + FAK G I+ DV +++
Sbjct: 68 MGHEDIASRIF-------GNVAFIFTNGDVREIKQIVEDNKRNTFAKVGAIAQTDVWIEK 120
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + LG+ T + KG V + ++ +G+ +TP QA +L ++
Sbjct: 121 KVTSMGPDKTS-FFQALGISTKITKGKVEIIQNSKALTEGEKVTPSQANLLAIM 173
>gi|242398375|ref|YP_002993799.1| Acidic ribosomal like protein P0 [Thermococcus sibiricus MM 739]
gi|259491696|sp|C6A1F5.1|RLA0_THESM RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|242264768|gb|ACS89450.1| Acidic ribosomal like protein P0 [Thermococcus sibiricus MM 739]
Length = 338
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL K ++ Y I + V ++ L +R +D +N ++ AL K+ ++ +
Sbjct: 13 EELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALKKAAQELND 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
N+ + ++G G+L T + + + + + AK+G + DV + GP P P
Sbjct: 73 SNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVPAGPTPLSP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ +++ LG+ + KG V++ KD V K G+++TP+ A IL
Sbjct: 133 GPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANIL 176
>gi|375081933|ref|ZP_09729006.1| acidic ribosomal protein P0 [Thermococcus litoralis DSM 5473]
gi|374743373|gb|EHR79738.1| acidic ribosomal protein P0 [Thermococcus litoralis DSM 5473]
Length = 339
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL K ++ Y + + V ++ L +R + +N ++ A+ K+ ++
Sbjct: 13 EELAKLIKSYPVVALVDVADVPAYPLSKMRESLRGKAVLRVSRNTLIELAIKKAAQELNS 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ + ++G G+L T + + + + + AK G ++ D+ + GP P P
Sbjct: 73 PDLEKLVDHIQGGAGILVTEMNPFKLYKFLEESKKPAPAKPGVLAPRDIVVPAGPTPLSP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ +++ LG+ + KG V++ KD V K G+++TP+ A IL
Sbjct: 133 GPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANIL 176
>gi|341581837|ref|YP_004762329.1| acidic ribosomal protein P0 [Thermococcus sp. 4557]
gi|340809495|gb|AEK72652.1| acidic ribosomal protein P0 [Thermococcus sp. 4557]
Length = 339
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL ++ + I + V N+ L +R + +N ++ A+ ++ ++
Sbjct: 13 EELANIIKSHPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELNN 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ + ++G G+L T + + + + AK G + DV + GP P
Sbjct: 73 PDLEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSISP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + KG V++ KD+TV K G+V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITDQLARILNAL 179
>gi|440492542|gb|ELQ75098.1| 60S acidic ribosomal protein P0 [Trachipleistophora hominis]
Length = 351
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 15/177 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERKQ L +Y+ + + N+ +S+L+ + W + F FGKN + AL
Sbjct: 98 ERKQLLFSRTKDYFTQYSQFIIVGLNNVTSSQLQSAKQAWHGKAEFLFGKNTTVKKALRD 157
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE---DFAKSGFISTEDVE 136
D+I I G +FTN DV + ED FAK G I+ DV
Sbjct: 158 MGHDDIVSRIF-------GNVAFIFTN---GDVREIKHIVEDNKRNTFAKVGAIAQTDVW 207
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+++ P + LG+ T + KG V + ++ G+ +TP QA +L ++
Sbjct: 208 IEKKVTNMGPDKTS-FFQALGISTKITKGKVEIIQNSKALTAGEKVTPSQANLLAIM 263
>gi|392512752|emb|CAD25614.2| 60S ACIDIC RIBOSOMAL PROTEIN P0 [Encephalitozoon cuniculi GB-M1]
Length = 266
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 15 TVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVM 73
T K ERK+ + K E Y+ + ++N+ +++LKD++ W ++ GKN +
Sbjct: 2 TRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSAI 61
Query: 74 AYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTE 133
A+ + E+ V +KG +F + D+ D E AK G ++
Sbjct: 62 RRAIADLGKPELSG----VYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQR 117
Query: 134 DVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
DV ++ P + LG+ T + KG V + + V +GD + P QA +L +L
Sbjct: 118 DVWVESCITGMTPDK-TSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGML 176
Query: 194 KKKMAKFKVLLYLWY 208
K +K+ ++ Y
Sbjct: 177 NIKPFCYKMTMHQIY 191
>gi|354611040|ref|ZP_09028996.1| Acidic ribosomal protein P0-like protein [Halobacterium sp. DL1]
gi|353195860|gb|EHB61362.1| Acidic ribosomal protein P0-like protein [Halobacterium sp. DL1]
Length = 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGK 79
E KQ DELV +E+Y+++ V SV + + +L+D+R S +N ++ AL
Sbjct: 13 EWKQQEVDELVDLLEQYDSVGVVSVTGIPSKQLQDMRRGLHGSAALRMSRNTLLVRAL-- 70
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+E++ + ++ + G+ GL+ TN + + + + +G ++ D+ + E
Sbjct: 71 ---EEVDDGLEELTQYISGEVGLVATNDNPFGLFKQLEASKTPAPINAGEVAPNDIVIPE 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + +D V ++G+ ++ + A +L L
Sbjct: 128 GDTGIDPGPFVGELQTIGANARIQEGSIQVLEDSVVTEEGETVSNDVANVLAEL 181
>gi|339246827|ref|XP_003375047.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
gi|316971687|gb|EFV55433.1| mRNA turnover protein 4-like protein [Trichinella spiralis]
Length = 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 31/175 (17%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVR--- 57
MP+SKRDK+V+L+ KKG E K+N+ +V + F Q ++ K +
Sbjct: 1 MPRSKRDKEVSLTVVKKKGREGKENVFCGIVSNSSNEPSQACF--QRKQSGKFVQIEFNA 58
Query: 58 --NDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMW 115
+ W D V+ + + +++ + +V + LL N K
Sbjct: 59 GWSTWTD---------VLQFVCRRC--NKVRTAVEIVHAFA----ALLCRNLKK------ 97
Query: 116 FDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLF 170
E +FA+SG +TE + + GPL +F +IEP LR+LGL L KG + F
Sbjct: 98 ---LEQPEFARSGNKATETITIPAGPLEQFQFTIEPLLRKLGLPVTLEKGNIFPF 149
>gi|223478893|ref|YP_002582911.1| 50S ribosomal protein P0 (L10p) [Thermococcus sp. AM4]
gi|214034119|gb|EEB74945.1| LSU ribosomal protein P0 (L10p) [Thermococcus sp. AM4]
Length = 339
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL K ++ + I + V + L +R+ + +N ++ A+ ++ ++ +
Sbjct: 13 EELTKIIKSHPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELNK 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
++ + ++G +L T + + + + AK G + DV + GP P
Sbjct: 73 PDLEKLVDYIEGGAAILATEMNPFKLYKLLEESKTPAPAKPGAVVPRDVVIPAGPTSLAP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +++ LG+ + KG V++ KD+TV K G+V+T + ARIL L
Sbjct: 133 GPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNAL 179
>gi|403171461|ref|XP_003330693.2| hypothetical protein PGTG_12230 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169193|gb|EFP86274.2| hypothetical protein PGTG_12230 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKNIHV 91
+A EK+ ++++F+V ++ L+D+R+ WK S+ + G+N VM L +EDE + +
Sbjct: 65 QASEKFQSVWLFTVDHVWTPYLQDIRSSWKPSQIYMGRNAVMRLGLRSKEEDERKPGLGT 124
Query: 92 VSSALKGQCGLLFTN 106
L+G GLL N
Sbjct: 125 TGKLLEGDTGLLLMN 139
>gi|307354261|ref|YP_003895312.1| 50S ribosomal protein L10 [Methanoplanus petrolearius DSM 11571]
gi|307157494|gb|ADN36874.1| ribosomal protein L10 [Methanoplanus petrolearius DSM 11571]
Length = 282
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 35 EKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVVS 93
E+Y + + + +L+++R D + S +N ++ +A ++ +I ++
Sbjct: 24 EQYKLTGLVDLHGIPAKQLQEMRRDLRGSAVLKMTRNTLIEHAF-----SQLGGDISEIN 78
Query: 94 SALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQL 153
S + GQ L++TN + + + AK G I+ ED+ + +GP P I QL
Sbjct: 79 SYIDGQSALIYTNENPFKLYKKLKETMTKMVAKPGDIAPEDISVSKGPTAFPPGPIVGQL 138
Query: 154 RQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEG 213
+Q G+ + G V + ++ TV K G+ ++ + A +L L + V L L EG
Sbjct: 139 QQAGIPAAIESGKVVIRENKTVVKAGEEISAKMADVLAKLDVR--PIDVGLNLQIACYEG 196
Query: 214 TF 215
TF
Sbjct: 197 TF 198
>gi|448629069|ref|ZP_21672468.1| acidic ribosomal protein P0 [Haloarcula vallismortis ATCC 29715]
gi|445757635|gb|EMA08976.1| acidic ribosomal protein P0 [Haloarcula vallismortis ATCC 29715]
Length = 348
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVAMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
DE++ + ++S + GQ GL+ T+ + + + + +G I+ D+ + E
Sbjct: 72 ---DEVDDGLEDLNSYVTGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEIAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNEL 182
>gi|344212263|ref|YP_004796583.1| acidic ribosomal protein P0/50S ribosomal protein L10E [Haloarcula
hispanica ATCC 33960]
gi|343783618|gb|AEM57595.1| acidic ribosomal protein P0 / 50S ribosomal protein L10E
[Haloarcula hispanica ATCC 33960]
Length = 347
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V+ +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
DE++ + ++S + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DEVDDGLEDLNSYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNEL 182
>gi|18978365|ref|NP_579722.1| acidic ribosomal protein P0 [Pyrococcus furiosus DSM 3638]
gi|397652361|ref|YP_006492942.1| acidic ribosomal protein P0 [Pyrococcus furiosus COM1]
gi|22257022|sp|Q8TZJ8.1|RLA0_PYRFU RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|428697980|pdb|3J21|KK Chain k, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (50s Ribosomal Proteins)
gi|18894199|gb|AAL82117.1| LSU ribosomal protein L10E [Pyrococcus furiosus DSM 3638]
gi|393189952|gb|AFN04650.1| acidic ribosomal protein P0 [Pyrococcus furiosus COM1]
Length = 339
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF--GKNKVMAYALGKSQED-- 83
+EL ++ Y + + V +M L +R +++ +N ++ A+ K ++
Sbjct: 13 EELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELG 72
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+EK I+ + +G G+L T + + + AK G +DV + GP
Sbjct: 73 KPELEKLINYI----EGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGP 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I Q++ +G+ + +G VT+ KD V K G+ +TPE A IL L
Sbjct: 129 TSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNAL 180
>gi|448681631|ref|ZP_21691722.1| acidic ribosomal protein P0 [Haloarcula argentinensis DSM 12282]
gi|445767501|gb|EMA18604.1| acidic ribosomal protein P0 [Haloarcula argentinensis DSM 12282]
Length = 347
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVDMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
DE++ + ++S + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DEVDDGLEDLNSYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNEL 182
>gi|448685416|ref|ZP_21693408.1| acidic ribosomal protein P0 [Haloarcula japonica DSM 6131]
gi|445782027|gb|EMA32878.1| acidic ribosomal protein P0 [Haloarcula japonica DSM 6131]
Length = 348
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVDMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
DE++ + ++S + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DEVDDGLEDLNSYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNEL 182
>gi|421975940|gb|AFX73002.1| deoxyribonuclease [Spirometra erinaceieuropaei]
Length = 322
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 98/207 (47%), Gaps = 16/207 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGK 79
ERK+ K + +Y+ FV ++R+ +++ +R + S FGKN M +
Sbjct: 8 ERKEQYFRRFSKNLTEYDKCFVVCADSVRSKQMQQIRVALRGSAEIVFGKNTQMRKVINS 67
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+++ +EK + + L+ GL+FT R ++V + E AK+G ++ +DV +
Sbjct: 68 QVNRDSRLEKLLPL----LRQNVGLVFTVRDLNEVRACLESNRLEAPAKAGAVAPKDVVI 123
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L +QT + +G + + D + KKG + +A +LK+L
Sbjct: 124 -----PAQNTGLGPEKTSFFQALSIQTKITRGTIEILNDVPIIKKGQKVGQSEAALLKML 178
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLD 220
K + +++ Y++ ++LD
Sbjct: 179 KINPFDYGLVIRHVYDQGSVYSPDVLD 205
>gi|333986628|ref|YP_004519235.1| acidic ribosomal protein P0-like protein [Methanobacterium sp.
SWAN-1]
gi|333824772|gb|AEG17434.1| Acidic ribosomal protein P0-like protein [Methanobacterium sp.
SWAN-1]
Length = 335
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+E + + + ++ ++ +L+ +R + K ++ + M+ AL +S++ N+ +
Sbjct: 19 IESHEVVGMANLADIPGPQLQKMRRNLKGNATLKMSRKTFMSLALEESKK----ANVASL 74
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
+KGQ L+FTN + + + + E AK G + D+ + +G P I +
Sbjct: 75 KDHMKGQPALIFTNMNPFKLYKILEESKTEAPAKPGSTAPFDIVVPKGDTAFKPGPILGE 134
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
L+++G+ ++KG + + KD TV +GD ++ E A IL L + + L Y +
Sbjct: 135 LQKVGIPAKIDKGKIVITKDKTVVAEGDEISREIASILTRLDIHPMEVGIDLIAAYEDQT 194
Query: 213 GTFENLL--DREKTPMDI 228
+LL D EKT DI
Sbjct: 195 VYTSDLLTIDEEKTLSDI 212
>gi|50287951|ref|XP_446404.1| 60S acidic ribosomal protein P0 [Candida glabrata CBS 138]
gi|49525712|emb|CAG59331.1| unnamed protein product [Candida glabrata]
Length = 311
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ VR + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSIFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + + KG G +FTN S D+ + A+SG ++ ED+ +
Sbjct: 66 FISDLPDYEKLLPFI----KGNVGFIFTNESLKDIKEVIVANKVAAPARSGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
K +EP + LG+ T + +G + + D V + G+ + P +A +L LL
Sbjct: 122 K-----AMNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNRVGPSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ + F P I D+ D+E
Sbjct: 177 NISPFTYGLTVVQVYDQGQ-VF---------PSTILDITDEE 208
>gi|48477511|ref|YP_023217.1| acidic ribosomal protein P0 [Picrophilus torridus DSM 9790]
gi|73917555|sp|Q6L1X8.1|RLA0_PICTO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|48430159|gb|AAT43024.1| large subunit ribosomal protein L10P [Picrophilus torridus DSM
9790]
Length = 315
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 42 VFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQC 100
+ S++ +RN++ + +RN +D +R + +++ A+ E+ + NI + GQ
Sbjct: 27 IVSIKGLRNNEFQKIRNSIRDKARIKVSRARLLRLAI----ENTGKNNIVKLKDYAHGQV 82
Query: 101 GLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDV--ELKEGPLPEFPHSIEPQLRQLGL 158
L+ T+ S + + + + AK G I+ ED+ E KE P P E Q + GL
Sbjct: 83 ALITTDESPKKIYDILEKSKTKAPAKGGEIAEEDIVIEPKETNFPPGPKISEFQ--KAGL 140
Query: 159 QTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ KG + + + T KKGDV+T E+A +LK
Sbjct: 141 PAAIEKGKIVIKSEVTFVKKGDVITREKALVLK 173
>gi|448411817|ref|ZP_21576173.1| acidic ribosomal protein P0 [Halosimplex carlsbadense 2-9-1]
gi|445669751|gb|ELZ22359.1| acidic ribosomal protein P0 [Halosimplex carlsbadense 2-9-1]
Length = 348
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQ 81
KQ ++V+ +E Y+++ + + + + +L+D+R D + + +N +M AL
Sbjct: 14 KQEEVADVVEMIESYDSVGIVDITGIPSRQLQDMRRDLYGTAELRVSRNTLMERALA--- 70
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E++ + ++ + GQ GL+ TN + + + + +G ++ D+ + EG
Sbjct: 71 --EVDAGLEDLTDYVSGQVGLIGTNENPFGLYQQLEASKTPAPINAGEVAPNDIVIPEGD 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P L+Q+G + +G + + D TV + G+ ++ + A +L L
Sbjct: 129 TGIDPGPFVGDLQQVGADARIQEGSIQVLSDSTVLETGEEVSNDLANVLNEL 180
>gi|84468360|dbj|BAE71263.1| putative 60S acidic ribosomal protein P0 [Trifolium pratense]
gi|84468386|dbj|BAE71276.1| putative 60S acidic ribosomal protein P0 [Trifolium pratense]
Length = 321
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQN +L + ++++N I V + N+ +++L+ +R + DS GKN +M ++
Sbjct: 9 EKKQNYDSKLCQLLDEFNQILVVNADNVGSNQLQSIRRGLRGDSVVLMGKNTMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLVPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLAI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 184 RPFSYGLVVLSVYDN 198
>gi|294899254|ref|XP_002776556.1| 60S acidic ribosomal protein P0, putative [Perkinsus marinus ATCC
50983]
gi|239883598|gb|EER08372.1| 60S acidic ribosomal protein P0, putative [Perkinsus marinus ATCC
50983]
Length = 318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 4 SKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD- 62
+ RD K KT L+R +NL D K I + SV ++ +++L+ +R +
Sbjct: 2 APRDPKKLAKKTAY--LDRVKNLLDTCEK-------ILIASVDHVGSNQLQQIRIALRGK 52
Query: 63 SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE 122
+ GKN ++ AL + E+E E ++ + + +KG GL+F D++ ++
Sbjct: 53 AIIVMGKNTMLRTAL-RQYEEEHEADLGHLLNVIKGNIGLIFCMAPIDEIREVISQHKVP 111
Query: 123 DFAKSGFISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKK 178
AK+G ++ +V++ G P S++P + L + T + KG + + D + K
Sbjct: 112 AMAKAGMVAQCNVDIPTG-----PTSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTK 166
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
G +T Q +L L + ++ V L Y+ E
Sbjct: 167 GQKVTASQQALLMKLNIRPFEYGVELESIYDNGE 200
>gi|325959972|ref|YP_004291438.1| acidic ribosomal protein P0 [Methanobacterium sp. AL-21]
gi|325331404|gb|ADZ10466.1| Acidic ribosomal protein P0-like protein [Methanobacterium sp.
AL-21]
Length = 333
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 25 NLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQED 83
NL+D + Y + + ++ ++ +L+ +R KDS + +M+ AL S++
Sbjct: 14 NLKD----LINSYEVVGMANLADIPAPQLQQMRRTLKDSATLKMSRKTLMSLALNDSEKA 69
Query: 84 EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
+IE + ++GQ L+FTN + + + + AK+G I+ ED+ + +G
Sbjct: 70 QIEN----LEDYMEGQPALIFTNMNPFKLYKILESSKTPAPAKAGSIAPEDIIVPKGDTA 125
Query: 144 EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVL 203
P + +L++ G+ + KG + + D + + G+V+ + A IL L+ + +
Sbjct: 126 FKPGPVLGELQKAGIPAKIEKGKIVITNDKVIVEAGEVIPRDVASILTRLEIFPLEVGID 185
Query: 204 LYLWYNKKEGTFENLL--DREKTPMDI 228
L Y + +LL D EKT D+
Sbjct: 186 LRAAYEAETIYTSDLLTVDEEKTLADV 212
>gi|323452332|gb|EGB08206.1| hypothetical protein AURANDRAFT_64196 [Aureococcus anophagefferens]
Length = 888
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Query: 73 MAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
M ALG +E+E++ I +S ALKG L+ T+ + ++ + +FA +GF+
Sbjct: 1 MKVALGDCEENELKPAISQLSGALKGGHALIATDAPRAAIVAALEGCRAPEFATAGFVPD 60
Query: 133 EDVELKEGPL--PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
E V L++G L ++P S+ +++ + + + L + V K ++ EQA++L
Sbjct: 61 EHVVLEKGDLDVAKYPVSMLAVFKKMDMPVEVQDSKLVLIDNFRVASKNKPISAEQAKML 120
Query: 191 KLLKKKMAKF 200
+ K+ +F
Sbjct: 121 THMDLKLHEF 130
>gi|399576666|ref|ZP_10770421.1| LSU ribosomal protein l10p [Halogranum salarium B-1]
gi|399238110|gb|EJN59039.1| LSU ribosomal protein l10p [Halogranum salarium B-1]
Length = 346
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ+ DELV +E Y+++ + V + + +L+++R + +N ++ AL
Sbjct: 17 KQDEVDELVDFIEGYSSVGIVGVAGIPSKQLQNMRRGLHGKAEVRMSRNTLVTRAL---- 72
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
+++++ + ++ + GQ L+ TN + + + + +G ++ D+ + EG
Sbjct: 73 -EQVDEGVEDLTEFVAGQVALIGTNDNPFGLFKELEASKTPAPINAGEVAPNDIVIPEGD 131
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+Q+G + G +T+ +D TV +G+V++ E + +L L
Sbjct: 132 TGVDPGPFVGELQQVGASARIMDGSITVTEDSTVLSEGEVVSEELSNVLSEL 183
>gi|407461888|ref|YP_006773205.1| acidic ribosomal protein P0 [Candidatus Nitrosopumilus koreensis
AR1]
gi|407045510|gb|AFS80263.1| acidic ribosomal protein P0 [Candidatus Nitrosopumilus koreensis
AR1]
Length = 288
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 5/185 (2%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKS 80
RK + +L + +KY + V + +R++++ +R K D FF K+KV AL KS
Sbjct: 11 RKTQMYQQLQELPKKYKVMAVIKMNKVRSTQILPLRKTLKEDVEFFSIKDKVAQKALEKS 70
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ + KGQ L+FTN S + + + A+ G I++ DV +
Sbjct: 71 DIPGMKDMV----GEFKGQIMLMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAK 126
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P + + ++ G+ T +++G + + KD T KKG+ + + A IL L K +
Sbjct: 127 NTGIAPGPMLTEFKEAGIPTKIDQGTIWIAKDSTPVKKGEAINEKLAAILGKLDIKPVEA 186
Query: 201 KVLLY 205
+ LY
Sbjct: 187 GITLY 191
>gi|448671742|ref|ZP_21687547.1| acidic ribosomal protein P0 [Haloarcula amylolytica JCM 13557]
gi|445764878|gb|EMA16021.1| acidic ribosomal protein P0 [Haloarcula amylolytica JCM 13557]
Length = 348
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVAMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
DE++ + ++S + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DEVDDGLEDLNSYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D V G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSVVLDTGEEVSQELANVLNEL 182
>gi|357466423|ref|XP_003603496.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
gi|355492544|gb|AES73747.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
Length = 323
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQN +L + +++Y I V + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMA 198
G P + L + T +NKG V + + KKGD V + E A + KL + +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 199 KFKVLLYLWYN 209
V+L ++ N
Sbjct: 188 YGLVVLSVYDN 198
>gi|18313827|ref|NP_560494.1| acidic ribosomal protein P0 [Pyrobaculum aerophilum str. IM2]
gi|20978700|sp|Q8ZTT3.1|RLA0_PYRAE RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|18161389|gb|AAL64676.1| acidic ribosomal protein P0 (L10E) [Pyrobaculum aerophilum str.
IM2]
Length = 345
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQ 81
RK + E + ++KY +F+F + + + L + R + +G K++ L K
Sbjct: 19 RKVKIVSEATELLQKYPYVFLFDLHGLSSRILHEYRYRLRR----YGVIKIIKPTLFKIA 74
Query: 82 EDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ I ++ ++G+ G FT+ + +V+ A+ G + D+ + G
Sbjct: 75 FTKVYGGIPAEIAEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAG 134
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKMA 198
P P I + +L + T + +G + + KD V K G +TPE A +L++ ++
Sbjct: 135 PTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIFE 194
Query: 199 KFKVLLYLWYNKK 211
+ ++L +W ++
Sbjct: 195 QLRLLGVIWRGQR 207
>gi|294945520|ref|XP_002784721.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
gi|239897906|gb|EER16517.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 4 SKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD- 62
+ RD K KT L+R +NL D K I + SV ++ +++L+ +R +
Sbjct: 2 APRDPKKLAKKTAY--LDRVKNLLDTCEK-------ILIASVDHVGSNQLQQIRIALRGK 52
Query: 63 SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE 122
+ GKN ++ AL + E+E + ++ + + +KG GL+F D++ ++
Sbjct: 53 AIIVMGKNTMLRTAL-RQYEEEHDADLGHLLNVIKGNIGLIFCMAPIDEIREVISQHKVP 111
Query: 123 DFAKSGFISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKK 178
AK+G ++ +V++ G P S++P + L + T + KG + + D + K
Sbjct: 112 AMAKAGMVAQCNVDIPAG-----PTSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTK 166
Query: 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKE 212
G +T Q +L L + ++ V L Y+ E
Sbjct: 167 GQKVTASQQALLMKLNIRPFEYGVELESIYDNGE 200
>gi|374326921|ref|YP_005085121.1| 50S ribosomal protein L10 [Pyrobaculum sp. 1860]
gi|356642190|gb|AET32869.1| ribosomal protein L10 [Pyrobaculum sp. 1860]
Length = 344
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
+ K + +E V+ + KY +F+F + + + L + R + +G KV+ L K
Sbjct: 17 QSKVRIVNEAVELLRKYPYVFLFDLHGLSSRVLNEYRYRLRP----YGAVKVIKPTLFKI 72
Query: 81 QEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ + V+ ++G+ G FT + +V+ A+ G + D+ +
Sbjct: 73 AFAKVFGGVPAEVAERVRGEVGFFFTEVNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPA 132
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKM 197
GP P I + +L + T + +G + + KD V K G +TPE A +L++ ++
Sbjct: 133 GPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIF 192
Query: 198 AKFKVLLYLWYNKK 211
+ ++L +W ++
Sbjct: 193 EQLRLLGVIWRGQR 206
>gi|448321124|ref|ZP_21510604.1| acidic ribosomal protein P0 [Natronococcus amylolyticus DSM 10524]
gi|445603984|gb|ELY57935.1| acidic ribosomal protein P0 [Natronococcus amylolyticus DSM 10524]
Length = 348
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIE 86
DEL + +E Y ++ + + + + +L+D+R D S +N + AL ++ D++
Sbjct: 21 DELSELIESYESVGIVGIAGIPSKQLQDMRRDLHGSAELRVSRNTLQVRALEEADLDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+ I +GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EQI-------EGQVGLVGTNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + G + + +D TV + G+ ++ + A +L L +
Sbjct: 128 DTGVDPGPFVGELQSIGANARIQDGSIKVMEDSTVLEAGEEVSADLANVLNEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EGT L D E +D+ E D
Sbjct: 186 EVGLDLRAVVAEGT---LFDPEDLDIDVEAYESD 216
>gi|167520384|ref|XP_001744531.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776862|gb|EDQ90480.1| predicted protein [Monosiga brevicollis MX1]
Length = 310
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+EK++ I + N+ + +++D+R + + GKN ++ AL E+EI H +
Sbjct: 21 LEKFSRILIVHADNVGSKQMQDIRAALRGNCELLMGKNTMVRRAL-LDHENEI---FHEL 76
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLPEFPHSI 149
+KG GLLFTN DD + DV D A+ G I+ E + + GP +
Sbjct: 77 LPHIKGNVGLLFTN---DDFVAIRDVLLDHKVAAPARVGAIAPEPIIIPAGPTGQDAQKT 133
Query: 150 EPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ L + T + KG + + + + ++G + P +A +L +L
Sbjct: 134 S-FFQALNIPTKIAKGSIEIISEVRLLEEGGRVGPSEAALLNML 176
>gi|452209593|ref|YP_007489707.1| LSU ribosomal protein P0 (L10p) [Methanosarcina mazei Tuc01]
gi|452099495|gb|AGF96435.1| LSU ribosomal protein P0 (L10p) [Methanosarcina mazei Tuc01]
Length = 347
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 27 RDEL--VKAVEKYNNIF-VFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQED 83
+DE+ +K + + + +F + ++ + +K++ +R D KD KV L + +
Sbjct: 16 KDEIENIKELIQSHKVFGMVGIEGILATKIQKIRRDLKDVAVL----KVSRNTLTERALN 71
Query: 84 EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
++ ++I ++ L Q L+FTN S + + + K+G I+ ED+ +++GP
Sbjct: 72 QLGESIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTS 131
Query: 144 EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P I +L+ G+ +++ G V + + VCK G+ + + A +L L+
Sbjct: 132 FPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLE 182
>gi|397779353|ref|YP_006543826.1| Acidic ribosomal protein P0 [Methanoculleus bourgensis MS2]
gi|396937855|emb|CCJ35110.1| Acidic ribosomal protein P0 homolog AltName: Full=L10E
[Methanoculleus bourgensis MS2]
Length = 341
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
E+ +++E++ + V + + S+++ +R + +R +N ++ +AL ++
Sbjct: 18 EIKRSIEEHTLVGVVDMYGIPASQVQQIRRSLRGTARVKMARNTLIEHAL-----SDLGG 72
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
++ ++ GQ L+FTN + + + + + AK G + ED+ + +GP P
Sbjct: 73 SVAALNEHATGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVVPKGPTSFKPG 132
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA-RILKLLKKKMAKFKVLLYL 206
I +L+Q+G+ + G V + + TV K+G+ ++ + A ++KL K M VL
Sbjct: 133 PIVGELQQVGIPAAIEGGKVKIREAKTVVKEGETISKKVADALVKLGIKPMDVGLVLQAA 192
Query: 207 WY 208
+Y
Sbjct: 193 YY 194
>gi|448636826|ref|ZP_21675274.1| acidic ribosomal protein P0 [Haloarcula sinaiiensis ATCC 33800]
gi|445765132|gb|EMA16271.1| acidic ribosomal protein P0 [Haloarcula sinaiiensis ATCC 33800]
Length = 348
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V+ +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D+++ + ++ + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DDVDDGLEDLNDYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E A +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELANVLNEL 182
>gi|329766369|ref|ZP_08257915.1| acidic ribosomal protein P0 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137138|gb|EGG41428.1| acidic ribosomal protein P0 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 288
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKS 80
RK + +L++ +KY I + + +R S+L +R K F K++V AL KS
Sbjct: 11 RKTVMYQQLIEMPKKYKVIALVKTEKVRASQLLPLRKALKGQVEFVCVKDRVAQKALEKS 70
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
I+ +S L GQC +FTN S + + + A+ G I++ D+ +
Sbjct: 71 DIPGIKG----ISDELVGQCLFIFTNMSPFKLNVLLAKNKIMMAARGGDIASVDILVPAK 126
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P + + ++ G+ T +++G + + KD T KKG V+ + A +L L K +
Sbjct: 127 NTGIAPGPMLTEFKEAGIPTKIDQGTIWIQKDTTPVKKGGVINEKLAALLGKLDIKPVEA 186
Query: 201 KVLLY 205
+ LY
Sbjct: 187 GISLY 191
>gi|52549709|gb|AAU83558.1| LSU ribosomal protein L10P [uncultured archaeon GZfos31B6]
Length = 361
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
V KY+ I V ++++ +L+++R + KD + +N +M AL +S +D + +
Sbjct: 32 VSKYSVIGVVGIRDIPAKQLQEMRRNMKDVVKIRIYRNNLMHRALNESSDD-----LSPI 86
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
S++ Q L+FT+ + + + + E K+G I+ +D+ ++ GP P I +
Sbjct: 87 GSSVGDQTALVFTDLNPFKLFKLLESSKTEAPIKAGAIAPDDIVVEGGPTSFAPGPIVGE 146
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLT 183
L+ G+ ++KG V + + V G+ ++
Sbjct: 147 LQNAGIPARIDKGKVVIRETKVVLHAGEAVS 177
>gi|76802858|ref|YP_330953.1| acidic ribosomal protein P0 [Natronomonas pharaonis DSM 2160]
gi|121721741|sp|Q3INI7.1|RLA0_NATPD RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|76558723|emb|CAI50316.1| 50S ribosomal protein L10 [Natronomonas pharaonis DSM 2160]
Length = 354
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 18/180 (10%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGK 79
E KQ DELV +E+Y ++ V + + + +L+D+R D + +N +M AL +
Sbjct: 13 EWKQEEIDELVAFLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALNE 72
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTE 133
+ E HV +GQ GL+ TN + F +Y+ + +K +G ++
Sbjct: 73 GGDGLGELVEHV-----EGQVGLIGTNDNP------FGLYQQLEESKTPAPINAGEVAPN 121
Query: 134 DVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
D+ + EG P L+Q+G + G + + +D TV G+ ++ + + +L L
Sbjct: 122 DIVIPEGDTGVDPGPFVGDLQQVGANARIEGGSIKVVEDSTVLSAGEEVSSDLSNVLSEL 181
>gi|402467219|gb|EJW02557.1| hypothetical protein EDEG_03035 [Edhazardia aedis USNM 41457]
Length = 269
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK 79
ERK++ +K + Y+ + + N+ +L++++ +W KD+ GKN V+ AL +
Sbjct: 8 ERKESTYQAALKLFQTYDKFILVGMDNVTAFQLQEMKKEWRKDTEILLGKNTVIKKALLE 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E +K + L +FT + + FA G IS +DV LK+
Sbjct: 68 IYEKTKKKVFKDLHDMLTSNLAFVFTKNDPKVLKEIMTKNSRDTFAAIGQISQKDVWLKK 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
P + + L + T + KG V + D V K+G +TP QA +L ++ K
Sbjct: 128 HITSMGPEKTKF-FQALDIFTKITKGKVEIMSDVLVLKEGTKVTPSQANLLSIMGVKAFV 186
Query: 200 F 200
F
Sbjct: 187 F 187
>gi|325187541|emb|CCA22079.1| 60S acidic ribosomal protein P0 putative [Albugo laibachii Nc14]
Length = 318
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERKQ L +E + IF+ SV N+R+ +++ +R + + GKN +M G
Sbjct: 6 ERKQEYFVRLESLLETFTKIFLVSVDNVRSKQMQQIRQSLRGRAEILMGKNTLMRKVFGN 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ +V ++G G +FTN +D+ + A+ G ++ DV +
Sbjct: 66 FLRKNPNHPLEMVVPLIRGNIGFVFTNDDLNDIRSVLESNRVPAPARVGAVAPADVVVPP 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T + KG + + + + K+G+ + +A +L+ L
Sbjct: 126 GSTGCDPGQTS-FFQALQIATKIQKGQIEIVSEVLLIKEGEKVGNSEAALLQKLNINPFS 184
Query: 200 FKVLLYLWYN 209
+ ++L Y+
Sbjct: 185 YGLVLVSVYD 194
>gi|168014097|ref|XP_001759592.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689131|gb|EDQ75504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 319
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +LV+ +E+Y+ + + + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKALYDKKLVQLLEEYSQVLICAADNVGSKQLQEIRKGLRPDSIVLMGKNTMMKRSIRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K+ + AL G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNKDYEELLPALVGNVGLIFTKGDLKEVREEIAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G ++P + L + T +NKG V + + KGD + +A +L L
Sbjct: 129 G-----NTGLDPSQTSFFQVLNIPTKINKGTVEIIAPVELVHKGDKVGSSEAALLAKLGI 183
Query: 196 KMAKFKVLLYLWYN 209
+ + +++ Y+
Sbjct: 184 RPFSYGLVVVNIYD 197
>gi|294494870|ref|YP_003541363.1| 50S ribosomal protein L10P [Methanohalophilus mahii DSM 5219]
gi|292665869|gb|ADE35718.1| LSU ribosomal protein L10P [Methanohalophilus mahii DSM 5219]
Length = 345
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 22 RKQNLRDELVKA-VEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGK 79
+KQ + D +KA +EKY + V + +L+ +R + KD +N ++ AL
Sbjct: 16 KKQEIED--IKALIEKYPLFGIVGVGGIPAKQLQAMRRELKDVAVLKVCRNTLVNRALES 73
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
S +D E + L QC L+FTN + + + + K+G I+ +D+++++
Sbjct: 74 SSKDCSE-----MIDYLNQQCALIFTNENPFKLYKLLEQSKTPSPIKAGAIAPQDIKVEK 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
GP P I L+ G+ +++ G V + ++ V ++G+V++ A +L L+
Sbjct: 129 GPTSFPPGPILGDLQSAGIPASIDGGKVVVSENKVVTEEGNVVSQNLASMLARLE 183
>gi|21227115|ref|NP_633037.1| acidic ribosomal protein P0 [Methanosarcina mazei Go1]
gi|23822065|sp|Q8PY51.1|RLA0_METMA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|20905444|gb|AAM30709.1| LSU ribosomal protein L10P [Methanosarcina mazei Go1]
Length = 347
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 27 RDEL--VKAVEKYNNIF-VFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQE 82
+DE+ +K + + + +F + ++ + +K++ +R D KD +N + AL
Sbjct: 16 KDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERAL----- 70
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
+++ ++I ++ L Q L+FTN S + + + K+G I+ ED+ +++GP
Sbjct: 71 NQLGESIPEMTRYLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P I +L+ G+ +++ G V + + VCK G+ + + A +L L+
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLE 182
>gi|388503628|gb|AFK39880.1| unknown [Medicago truncatula]
Length = 323
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQN +L + +++Y I V + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMA 198
G P + L + T +NKG + + KKGD V + E A + KL + +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 199 KFKVLLYLWYN 209
V+L ++ N
Sbjct: 188 YGLVVLSVYDN 198
>gi|367002572|ref|XP_003686020.1| 60S acidic ribosomal protein P0 [Tetrapisispora phaffii CBS 4417]
gi|357524320|emb|CCE63586.1| hypothetical protein TPHA_0F01000 [Tetrapisispora phaffii CBS 4417]
Length = 314
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 35 EKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-GKSQE-DEIEKNIHV 91
E+Y ++FV V N+ + ++ VR + GKN ++ A+ G QE ++EK +
Sbjct: 20 EEYKSLFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRGIVQEMPDLEKLVPF 79
Query: 92 VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
+ +G G +FTN S ++ + A++G ++ ED+ + +EP
Sbjct: 80 I----RGNVGFIFTNSSLQEIKEVIISNKVSAPARAGAVAPEDIWVT-----AVNTGMEP 130
Query: 152 Q----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
+ LG+ T + +G + + D V + G+ + P +A +L LL + + +
Sbjct: 131 GKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEASLLNLLNISPFTYGLTVVQV 190
Query: 208 YNKKEGTFENLLDREKTPMDIYDMEDDE 235
Y+ + + P I D+ DDE
Sbjct: 191 YD----------NGQVFPSSILDITDDE 208
>gi|15229706|ref|NP_187734.1| 60S acidic ribosomal protein P0-3 [Arabidopsis thaliana]
gi|12644551|sp|P57691.1|RLA03_ARATH RecName: Full=60S acidic ribosomal protein P0-3
gi|12321877|gb|AAG50973.1|AC073395_15 60S acidic ribosomal protein, putative; 58619-59992 [Arabidopsis
thaliana]
gi|15810223|gb|AAL07229.1| putative 60S acidic ribosomal protein [Arabidopsis thaliana]
gi|20259595|gb|AAM14140.1| putative 60S acidic ribosomal protein [Arabidopsis thaliana]
gi|332641499|gb|AEE75020.1| 60S acidic ribosomal protein P0-3 [Arabidopsis thaliana]
Length = 323
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|355571075|ref|ZP_09042345.1| ribosomal protein L10 [Methanolinea tarda NOBI-1]
gi|354826357|gb|EHF10573.1| ribosomal protein L10 [Methanolinea tarda NOBI-1]
Length = 284
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSS 94
KY + + + + S+L+ +R + + ++ +N ++ A DE+ + + ++
Sbjct: 25 KYTLVGLVDMYGIPASQLQQIRRNLRSKAKIKMTRNTLIRCAF-----DEVGEPVALLKP 79
Query: 95 ALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLR 154
L G L+FTN + + + + + AK G + D+ +++GP P I +L+
Sbjct: 80 HLSGHSALIFTNENPFRLYKTLEKTKTKMAAKPGETAPADIVVEKGPTSFKPGPIVGELQ 139
Query: 155 QLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
Q G+ + G V + + TV KKG+V++ + A +L L
Sbjct: 140 QAGIPAAIEAGKVKIRETRTVVKKGEVISAKLADVLAKL 178
>gi|21593316|gb|AAM65265.1| 60S acidic ribosomal protein P0-C [Arabidopsis thaliana]
Length = 323
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|159111124|ref|XP_001705794.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
gi|157433884|gb|EDO78120.1| Acidic ribosomal protein P0 [Giardia lamblia ATCC 50803]
Length = 326
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS 80
R+Q +L + + +Y I + SV N+R+ ++ +R + + GKN ++ + +
Sbjct: 12 RRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVINQL 71
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+D+++ + + K +FTN +L F + + AK+G ++ DV
Sbjct: 72 DDDKLKNLLPYI----KLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADV----- 122
Query: 141 PLPEFPHSIEPQLRQ-----------LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
IEP L Q LG+ T +NKG + + + KKGD++TP A +
Sbjct: 123 -------VIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATL 175
Query: 190 LKLLK 194
L+ L+
Sbjct: 176 LQRLE 180
>gi|393795050|ref|ZP_10378414.1| acidic ribosomal protein P0 [Candidatus Nitrosoarchaeum limnia
BG20]
Length = 288
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKS 80
RK + +L++ +KY + + + +R S+L +R K F K++V AL KS
Sbjct: 11 RKTVMYQQLIEMPKKYKVVALVKTEKVRASQLLPLRKALKGQVEFVCVKDRVAQKALEKS 70
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
I+ +S L GQC +FTN S + + + A+ G I++ D+ +
Sbjct: 71 DIPGIKG----ISDELVGQCLFIFTNMSPFKLNVLLAKNKIMMAARGGDIASVDILVPAK 126
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P + + ++ G+ T +++G + + KD T KKG V+ + A +L L K +
Sbjct: 127 NTGIAPGPMLTEFKEAGIPTKIDQGTIWIQKDTTPVKKGGVINEKLAALLGKLDIKPVEA 186
Query: 201 KVLLY 205
+ LY
Sbjct: 187 GISLY 191
>gi|294868296|ref|XP_002765467.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
gi|239865510|gb|EEQ98184.1| ribosomal P protein, putative [Perkinsus marinus ATCC 50983]
Length = 318
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 18 KGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYA 76
K L +K D + ++ I + SV ++ +++L+ +R + + GKN ++ A
Sbjct: 7 KKLAKKTAYLDRVKDLLDTCEKILIASVDHVGSNQLQQIRIGLRGKAIIVMGKNTMLRTA 66
Query: 77 LGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
L + E+E + ++ + + +KG GL+F D++ ++ AK+G ++ +V+
Sbjct: 67 L-RQYEEEHDADLGHLLNVIKGNIGLIFCMAPIDEIREIISQHKVPAMAKAGMVAQCNVD 125
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ G P S++P + L + T + KG + + D + KG +T Q +L
Sbjct: 126 IPAG-----PTSLDPSQTNFFQALNIATKIVKGSIEISNDVALVTKGSKVTASQQALLMK 180
Query: 193 LKKKMAKFKVLLYLWYNKKE 212
L + ++ V L Y+ E
Sbjct: 181 LNIRPFEYGVELESIYDNGE 200
>gi|255571861|ref|XP_002526873.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
gi|223533772|gb|EEF35504.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
Length = 320
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 2/182 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ ++ K
Sbjct: 17 KLCQLLDEYSQILIVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRSIRVHADNTGNK 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
I + L+G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 77 TILNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPS 136
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
+ L + T +NKG V + + KKGD + +A +L L + + +++
Sbjct: 137 QTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLIVLSV 195
Query: 208 YN 209
Y+
Sbjct: 196 YD 197
>gi|15825949|pdb|1JJ2|G Chain G, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150994|pdb|1KQS|G Chain G, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218928|pdb|1K8A|I Chain I, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218962|pdb|1K9M|I Chain I, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219005|pdb|1KD1|I Chain I, Co-crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219332|pdb|1M1K|I Chain I, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159027|pdb|1M90|I Chain I, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811124|pdb|1K73|I Chain I, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811154|pdb|1KC8|I Chain I, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811193|pdb|1N8R|I Chain I, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811223|pdb|1NJI|I Chain I, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927907|pdb|1Q7Y|I Chain I, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927942|pdb|1Q81|I Chain I, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927978|pdb|1Q82|I Chain I, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928014|pdb|1Q86|I Chain I, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654679|pdb|1QVF|G Chain G, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654712|pdb|1QVG|G Chain G, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|50513476|pdb|1S72|G Chain G, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|55670542|pdb|1W2B|G Chain G, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|66360790|pdb|1YHQ|G Chain G, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360823|pdb|1YI2|G Chain G, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360856|pdb|1YIJ|G Chain G, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360889|pdb|1YIT|G Chain G, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360922|pdb|1YJ9|G Chain G, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360955|pdb|1YJN|G Chain G, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360988|pdb|1YJW|G Chain G, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753132|pdb|1VQ4|G Chain G, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753164|pdb|1VQ5|G Chain G, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753196|pdb|1VQ6|G Chain G, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753228|pdb|1VQ7|G Chain G, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753259|pdb|1VQ8|G Chain G, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753291|pdb|1VQ9|G Chain G, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753322|pdb|1VQK|G Chain G, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753353|pdb|1VQL|G Chain G, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753384|pdb|1VQM|G Chain G, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753416|pdb|1VQN|G Chain G, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753447|pdb|1VQO|G Chain G, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753479|pdb|1VQP|G Chain G, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580179|pdb|2OTJ|G Chain G, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|145580210|pdb|2OTL|G Chain G, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|171848843|pdb|2QA4|G Chain G, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|206581947|pdb|3CME|G Chain G, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|208435501|pdb|2QEX|G Chain G, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|228311918|pdb|3CXC|G Chain G, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|43605|emb|CAA35795.1| unnamed protein product [Haloarcula marismortui]
Length = 348
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V+ +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D+++ + ++ + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E + +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNEL 182
>gi|297833676|ref|XP_002884720.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297330560|gb|EFH60979.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 322
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|297829676|ref|XP_002882720.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297328560|gb|EFH58979.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 323
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|159042315|ref|YP_001541567.1| acidic ribosomal protein P0 [Caldivirga maquilingensis IC-167]
gi|157921150|gb|ABW02577.1| ribosomal protein L10 [Caldivirga maquilingensis IC-167]
Length = 303
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYAL-- 77
E K + EL + ++K++ I +F ++ + S L R + +NK+ AL
Sbjct: 20 EWKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRR 79
Query: 78 --GKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDV 135
G S EIEK L G+ G +FTN + D+ +AK G + D+
Sbjct: 80 IYGDSVNAEIEKY-------LSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDI 132
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+ G P + + +L + T + G + + +D V K GD +TPE A +L+L+
Sbjct: 133 IVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINV 192
Query: 196 K 196
K
Sbjct: 193 K 193
>gi|15232603|ref|NP_187531.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
gi|19884289|sp|Q42112.2|RLA02_ARATH RecName: Full=60S acidic ribosomal protein P0-2
gi|6478915|gb|AAF14020.1|AC011436_4 putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|13877925|gb|AAK44040.1|AF370225_1 putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|16323458|gb|AAL15223.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|332641215|gb|AEE74736.1| 60S acidic ribosomal protein P0-2 [Arabidopsis thaliana]
Length = 320
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|55378200|ref|YP_136050.1| acidic ribosomal protein P0 [Haloarcula marismortui ATCC 43049]
gi|57015347|sp|P15825.2|RLA0_HALMA RecName: Full=50S ribosomal protein L10E; Short=Ribosomal protein
L10; AltName: Full=Acidic ribosomal protein P0 homolog;
AltName: Full=HMal10; AltName: Full=L10E
gi|188596008|pdb|3CC2|G Chain G, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596039|pdb|3CC4|G Chain G, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596070|pdb|3CC7|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596101|pdb|3CCE|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596132|pdb|3CCJ|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596163|pdb|3CCL|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596194|pdb|3CCM|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596225|pdb|3CCQ|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596256|pdb|3CCR|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596287|pdb|3CCS|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596318|pdb|3CCU|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596349|pdb|3CCV|G Chain G, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596380|pdb|3CD6|G Chain G, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc-puromycin
gi|194368711|pdb|3CPW|G Chain G, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581914|pdb|3CMA|G Chain G, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|228312148|pdb|3G4S|G Chain G, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312204|pdb|3G6E|G Chain G, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312240|pdb|3G71|G Chain G, Co-crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
gi|290790042|pdb|3I55|G Chain G, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790073|pdb|3I56|G Chain G, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|55230925|gb|AAV46344.1| 50S ribosomal protein L10E [Haloarcula marismortui ATCC 43049]
Length = 348
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V+ +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D+++ + ++ + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E + +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNEL 182
>gi|395646593|ref|ZP_10434453.1| ribosomal protein L10 [Methanofollis liminatans DSM 4140]
gi|395443333|gb|EJG08090.1| ribosomal protein L10 [Methanofollis liminatans DSM 4140]
Length = 282
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 4/182 (2%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEK 87
+E+ + E+Y + + + + ++L+ +R + + + K+ L + DEI
Sbjct: 17 EEIKRHFEEYPVVGLVDMYGIPATQLQQIRENLRGVAYI----KMARKTLTRRALDEIGG 72
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+S+ + GQ L+FT+ + + + + + AK G + ED+ + +GP P
Sbjct: 73 EAAGMSAHISGQSALIFTSENPFKLYKLLEQTKTKMAAKPGETAPEDIVVAKGPTSFKPG 132
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
I +L+Q G+ + G V + TV K+G V+ + A +L L K ++L
Sbjct: 133 PIVGELQQAGIPAMIEGGKVKIKDTKTVVKRGQVINAKMADVLAKLSIKPMDVGLILKAA 192
Query: 208 YN 209
Y
Sbjct: 193 YQ 194
>gi|448648570|ref|ZP_21679701.1| acidic ribosomal protein P0 [Haloarcula californiae ATCC 33799]
gi|445775671|gb|EMA26681.1| acidic ribosomal protein P0 [Haloarcula californiae ATCC 33799]
Length = 345
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 82/174 (47%), Gaps = 6/174 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E KQ D +V+ +E Y ++ V ++ + + +L+D+R D + +N ++ AL
Sbjct: 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERAL-- 71
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D+++ + ++ + GQ GL+ T+ + + + + +G ++ D+ + E
Sbjct: 72 ---DDVDDGLEDLNGYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPE 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + D TV G+ ++ E + +L L
Sbjct: 129 GDTGVDPGPFVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNEL 182
>gi|145485981|ref|XP_001428998.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396087|emb|CAK61600.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDW--KDSRFFFGKNKVMAYALGKSQEDEIE----- 86
+ KY + + + N+ + +++D+R +++ GKN + L +D E
Sbjct: 21 LSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQDLPEGHEYY 80
Query: 87 ----------KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
K + V+ + + G+ G +FT+ + D+ + + E A+ G ++ DV
Sbjct: 81 EELKKFGAAIKELDVLKNQVAGKVGFIFTDTAVFDLKSVIEENKVETPARVGAVAPIDVV 140
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P SI+ L + T + KG + + KD V K G + QA +L+ L KK
Sbjct: 141 IPPGPTGMDPASIQ-FFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 199
>gi|88601952|ref|YP_502130.1| acidic ribosomal protein P0 [Methanospirillum hungatei JF-1]
gi|88187414|gb|ABD40411.1| LSU ribosomal protein L10P [Methanospirillum hungatei JF-1]
Length = 282
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 52 KLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKD 110
+++D+R + + + +N ++ +A G EI +I +SS L G L+FTN +
Sbjct: 41 QVQDIRRNLRGKAELIMTRNTLIEHAFG-----EIGGSITDLSSHLSGHSALIFTNENPF 95
Query: 111 DVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLF 170
+ + + + A+ G + ED+ + +GP P I +L+Q G+ + G VT+
Sbjct: 96 KLYSMLEKTKTKMAARPGETAPEDIVVSKGPTSFRPGPIVGELQQAGIPAAIEAGKVTIR 155
Query: 171 KDHTVCKKG 179
+ TV K G
Sbjct: 156 ETKTVVKAG 164
>gi|379003525|ref|YP_005259197.1| 50S ribosomal protein L10 [Pyrobaculum oguniense TE7]
gi|375158978|gb|AFA38590.1| Ribosomal protein L10 [Pyrobaculum oguniense TE7]
Length = 344
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQ 81
RK +E V+ ++KY +F+F + + L + R + +G K++ L K
Sbjct: 18 RKVKTVNEAVELLKKYPYVFIFDLHGLSARVLNEYRYRIRP----YGVIKIIKPTLFKIA 73
Query: 82 EDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ I ++ ++G+ G LFT+ + +++ AK G + D+ + G
Sbjct: 74 FSKVYGGISTDIAEKIRGEIGFLFTDINPAEMIKIVAEKSVRRAAKPGDKAPFDIVVPAG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKMA 198
P P I + +L + T + +G + + KD V K G +T E A +L++ ++
Sbjct: 134 PTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPIFE 193
Query: 199 KFKVLLYLWYNKK 211
+ +++ LW K+
Sbjct: 194 QLRLVGVLWRGKR 206
>gi|257388232|ref|YP_003178005.1| 50S ribosomal protein L10 [Halomicrobium mukohataei DSM 12286]
gi|257170539|gb|ACV48298.1| ribosomal protein L10 [Halomicrobium mukohataei DSM 12286]
Length = 352
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D +V+ +E Y++I V ++ + + +L+D+R + +N ++ AL DE++
Sbjct: 21 DSIVEMIESYDSIGVVAITGIPSRQLQDMRRGLHGTAELRVSRNTLLERAL-----DEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + + GQ GL+ TN + F +Y++ + +K +G I+ D+ + EG
Sbjct: 76 AGLEQLGDYVSGQVGLIGTNDNP------FGLYKELEASKTPAPISAGEIAPNDIVIPEG 129
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
P +L+ +G ++ G + + +D TV + G
Sbjct: 130 DTGVDPGPFVGELQNVGANARIDGGSIKVVEDSTVLEAG 168
>gi|222064021|emb|CAQ86673.1| putative ribosomal protein L10 [Histomonas meleagridis]
Length = 323
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 35 EKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVS 93
KYN + + S +N+ S+L +R+D + + FGKN +M + + + + KNI V+
Sbjct: 31 HKYNKLALVSAENVTASQLLGIRHDLQGLAEIVFGKNSLMRRVVEELKSEL--KNIEVLE 88
Query: 94 SALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ- 152
+ G FTN S + D + AK G IS DV + P ++ P
Sbjct: 89 PLIYHGVGFCFTNGSFSKIKDVIDNHCKGSPAKVGAISPCDVVV-----PPMRTTLPPTQ 143
Query: 153 ---LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L L +Q+ + KG + + + + K+G+ + +A +L LL K+ + L Y+
Sbjct: 144 VSVLHALNIQSKIFKGTIEITSEKLLIKEGEKVGASEANLLGLLNIMPFKYTLKLVKLYD 203
>gi|311334512|emb|CBN08637.1| ribosomal protein, large, P0 [Microcosmus squamiger]
Length = 311
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-GKS 80
K N ++V+ +E+Y FV N+ + +++ +R +D + GKN +M A+ G
Sbjct: 10 KSNYFLKMVQLLEQYPKCFVVGADNVSSRQMQKIRASLRDQATVLMGKNTMMRKAIKGHL 69
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
Q + ++ + +KG GL+FT+ +V + A++G IS DV +
Sbjct: 70 QNN---PDLERLLPHIKGNVGLVFTDSDLTEVRDLLLENKVAAPARAGAISPVDVVI--- 123
Query: 141 PLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
P + P+ + L +QT +++G + + + + K GD + +A +L +L K
Sbjct: 124 --PAQNTGLGPEKTSFFQALAIQTKISRGTIEIISNVHILKPGDKVGASEATLLNML--K 179
Query: 197 MAKFKVLLYLWYNKKEGTFENLLDREKTPMDI 228
++ F L + +GT + + TP DI
Sbjct: 180 ISPFTYGLEIEQVYDDGTCFSPAVLDITPEDI 211
>gi|254564587|ref|XP_002489404.1| 60S acidic ribosomal protein P0 [Komagataella pastoris GS115]
gi|238029200|emb|CAY67120.1| Conserved ribosomal protein P0 similar to rat P0, human P0, and E.
coli L10e [Komagataella pastoris GS115]
gi|328349833|emb|CCA36233.1| 60S acidic ribosomal protein P0 [Komagataella pastoris CBS 7435]
Length = 312
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K ++L + +E Y +IF+ V N+ + ++ +VR + + GKN ++ AL
Sbjct: 6 EKKAEYFNKLRELLESYKSIFIVGVDNVSSQQMHEVRQTLRGKAVILMGKNTMVRKALRD 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTED 134
E+ EK + V +G G +FTN ++ DV++ V A+ G I+ D
Sbjct: 66 FVEELPVFEKLLPFV----RGNIGFVFTNEDLKTIRDVIIENRVAAP---ARPGAIAPLD 118
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V + G +EP + LG+ T +++G + + D V +K + P +A++L
Sbjct: 119 VFIPAG-----NTGMEPGKTSFFQALGVPTKISRGTIEITSDVKVVEKDSRVGPSEAQLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+L + + + ++ D + P +I D+ DDE
Sbjct: 174 NMLNISPFTYGLTVVQVFD----------DGQVFPANILDITDDE 208
>gi|335433976|ref|ZP_08558785.1| acidic ribosomal protein P0 [Halorhabdus tiamatea SARL4B]
gi|335438358|ref|ZP_08561106.1| acidic ribosomal protein P0 [Halorhabdus tiamatea SARL4B]
gi|334892552|gb|EGM30785.1| acidic ribosomal protein P0 [Halorhabdus tiamatea SARL4B]
gi|334898202|gb|EGM36317.1| acidic ribosomal protein P0 [Halorhabdus tiamatea SARL4B]
Length = 351
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVR-NDWKDSRFFFGKNKVMAYALGKSQEDEIE 86
D++V+ +E Y+++ V + + + +L+D+R N + + +N ++ AL DE++
Sbjct: 21 DDVVEMIESYDSVGVVDLTGIPSQQLQDMRRNLYGTAELRVSRNTLVERAL-----DEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + + + G GL+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 EGLETLVEFVSGHVGLIGTNDNPFSLYQQLEASKTSAPINAGEVAPNDIVIPEGDTGIDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+ +G + +G + + +D TV + G ++ + + +L L
Sbjct: 136 GPFVGELQSVGANARIQEGSIQVLEDSTVLEAGGEVSADLSNVLAEL 182
>gi|145591804|ref|YP_001153806.1| acidic ribosomal protein P0 [Pyrobaculum arsenaticum DSM 13514]
gi|145283572|gb|ABP51154.1| LSU ribosomal protein L10P [Pyrobaculum arsenaticum DSM 13514]
Length = 344
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQ 81
RK +E V+ ++KY +F+F + + L + R + +G K++ L K
Sbjct: 18 RKVKTVNEAVELLKKYPYVFIFDLHGLSARVLNEYRYRIRP----YGVIKIIKPTLFKIA 73
Query: 82 EDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ I ++ ++G+ G LFT+ + +++ AK G + D+ + G
Sbjct: 74 FSKVYGGISTDIAEKIRGEIGFLFTDINPAEMIKIVAEKSVRRAAKPGDKAPFDIVVPAG 133
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKMA 198
P P I + +L + T + +G + + KD V K G +T E A +L++ ++
Sbjct: 134 PTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPIFE 193
Query: 199 KFKVLLYLWYNKK 211
+ +++ LW K+
Sbjct: 194 QLRLVGVLWKGKR 206
>gi|449455034|ref|XP_004145258.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
gi|449470509|ref|XP_004152959.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
gi|449523077|ref|XP_004168551.1| PREDICTED: 60S acidic ribosomal protein P0-2-like [Cucumis sativus]
Length = 320
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K N +L + +++Y+ + + N+ +++L+ +R + DS GKN +M ++
Sbjct: 9 QKKTNYDQKLCRLLDEYSQVLIVGADNVGSNQLQSIRKGLRGDSIILMGKNTMMKRSIRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ + + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSENTGNTAVTNLLPHLVGNVGLIFTKGDLKEVKEEVAKYKVGAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKGD + +A +L L +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFS 187
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 188 YGLIVVSVYD 197
>gi|145356478|ref|XP_001422456.1| Cytosolic 80S ribosomal protein P0; Cytosolic 60S large ribosomal
subunit protein P0 [Ostreococcus lucimarinus CCE9901]
gi|144582699|gb|ABP00773.1| Cytosolic 80S ribosomal protein P0; Cytosolic 60S large ribosomal
subunit protein P0 [Ostreococcus lucimarinus CCE9901]
Length = 313
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 10/204 (4%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKS 80
+KQ + + K ++ Y+ + N+ + + D+R + +S GKN +M +
Sbjct: 8 KKQGYAERVHKLLDNYDTALLVHADNVGSKQFMDIRASIRPESVVLMGKNTLMRKCISNY 67
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+ + ++S+ L G G++FT DV + A+ G I+ +V + G
Sbjct: 68 CAAKGDDTWMILSNKLVGNVGIIFTKGDLLDVRKKIQQFVVPAPARVGAIAPVEVVVPAG 127
Query: 141 PLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
P +EP + L + T +NKG + + D V + GD ++ A +L +K
Sbjct: 128 P-----TGMEPSQTSFFQTLNIATKINKGTIEILNDIVVLQPGDRVSSSAAALLGKMKFT 182
Query: 197 MAKFKVLLYLWYNKKEGTFENLLD 220
+ +++ Y+K +LD
Sbjct: 183 PFTYGLIVMEVYDKGAMYPSAVLD 206
>gi|217073041|gb|ACJ84880.1| unknown [Medicago truncatula]
Length = 323
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQN +L + +++Y I V + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKQNYDAKLCQLIDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTAEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ V+L ++ N
Sbjct: 184 TPFSYGLVVLSVYDN 198
>gi|448318249|ref|ZP_21507777.1| acidic ribosomal protein P0 [Natronococcus jeotgali DSM 18795]
gi|445599711|gb|ELY53739.1| acidic ribosomal protein P0 [Natronococcus jeotgali DSM 18795]
Length = 347
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIE 86
DEL +E Y ++ + + + + +L+D+R D S +N + +AL + ++
Sbjct: 21 DELADLIESYESVGIVGIAGIPSKQLQDMRRDLHGSAELRVSRNTLQVHALEDAGLGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+++ +GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHV-------EGQVGLVGTNDNP------FALYKELEASKTPAPINEGEVAPNDIVVPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + G + + +D TV + G+ ++ + A +L L +
Sbjct: 128 DTGVDPGPFVGELQSVGANARIQDGSIQVMEDSTVLEAGEEVSADLANVLNEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EGT L D E +D+ E D
Sbjct: 186 EVGLDLRAVVAEGT---LFDPEDLDIDVEAYESD 216
>gi|73668158|ref|YP_304173.1| acidic ribosomal protein P0 [Methanosarcina barkeri str. Fusaro]
gi|121722290|sp|Q46EU9.1|RLA0_METBF RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|72395320|gb|AAZ69593.1| LSU ribosomal protein L10P [Methanosarcina barkeri str. Fusaro]
Length = 346
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGK 79
E K++ + +++ ++ + + ++ + +K++ +R D KD +N + AL +
Sbjct: 13 EWKKDEIENIMELIQSHKVFGMVGIEGILATKIQKIRRDLKDVAVLKVSRNSLTERALNQ 72
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E E N + L Q L+FTN S + + + K G I+ D+ +++
Sbjct: 73 LGESIPEMNKY-----LDKQTALVFTNESPFKLYKVLEQTKTPSPIKGGAIAPADIIVQK 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
GP P I +L+ G+ +++ G V + + VCK G+V++ + A +L
Sbjct: 128 GPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVSQKLATML 178
>gi|452824022|gb|EME31028.1| 60S acidic ribosomal protein P0 [Galdieria sulphuraria]
Length = 346
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW 60
MP+S+ D RK + D ++ EK++ + V V N+ +++L+ +R
Sbjct: 1 MPQSRAD--------------RKASYFDRIITYFEKFDKVLVIGVDNVGSNQLQKLRQSL 46
Query: 61 -KDSRFFFGKNKVMAYALGK--SQEDEIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWF 116
KD GKN ++ AL S+ +EK + H+V G G +FT+ +
Sbjct: 47 RKDCEVLMGKNTMIRKALRGHLSKNPALEKLLPHLV-----GNVGFIFTSGDLKQIREKI 101
Query: 117 DVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQL----RQLGLQTNLNKGVVTLFKD 172
AK+G + DV + GP +EP + + L + T +NKG + + D
Sbjct: 102 AENRVPAAAKAGTFAQCDVVIPAGP-----TGMEPTMTSFFQALNIPTKINKGQIEIQSD 156
Query: 173 HTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
T+ K+G + + +L+ L K K+ ++ + Y
Sbjct: 157 VTLLKEGQRVGNSEQTLLQKLNIKPFKYGAVIQVIY 192
>gi|448731739|ref|ZP_21714032.1| acidic ribosomal protein P0 [Halococcus salifodinae DSM 8989]
gi|445805638|gb|EMA55840.1| acidic ribosomal protein P0 [Halococcus salifodinae DSM 8989]
Length = 356
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 87/172 (50%), Gaps = 18/172 (10%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +E Y ++ V S+ + + +L+ +R + D+ +N ++ AL DE +
Sbjct: 25 DLAELIETYESVGVVSIGGIPSRQLQAMRRELHGDAELRVARNTLLVRAL-----DEAGE 79
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS-GFISTEDVELKEGPLPEFP 146
I ++S ++GQ GL+ T+ + F +Y + +K+ I+ ++ E +PE
Sbjct: 80 GIADLTSEIEGQVGLIGTDENP------FGLYRQLEASKTPAPINAGEIAPNEITIPESD 133
Query: 147 HSIEP-----QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
++P +L+Q+G + G + + +D TV ++G+ ++ + A +L L
Sbjct: 134 TGVDPGPFVGELQQVGAAARIMDGSIHVTEDSTVLEEGEEVSGQLANVLGEL 185
>gi|82617222|emb|CAI64128.1| acidic ribosomal protein P0 [uncultured archaeon]
gi|268322954|emb|CBH36542.1| 50S ribosomal protein L10E [uncultured archaeon]
Length = 313
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 16 VKKGLERKQNLRDELVKAVEK----YNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKN 70
+KK ++R + ++E V ++ Y+ I + ++ + + +L+ +R +++ D+ KN
Sbjct: 1 MKKKVKRARKWKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKN 60
Query: 71 KVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFA---KS 127
++A + G S +++ I Q L+FT+ D + V E K+
Sbjct: 61 SMIARSFGGSGMNDMVDFID-------DQMALIFTDL---DAFALYKVLEKGKIPAPIKA 110
Query: 128 GFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
G ++ D+ ++EGP P + +L+ LG+ + ++ G V + + ++G++++PE A
Sbjct: 111 GAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELA 170
Query: 188 RILKLLK 194
+L L+
Sbjct: 171 DMLAKLE 177
>gi|346430395|emb|CCC55651.1| 50S ribosomal protein L10p [uncultured archaeon]
Length = 292
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFG-KNKVMAYALGK 79
ERK L E+ + +Y+ + + + ++ S + +VR + G KN++ AL +
Sbjct: 14 ERKSRLYGEIKRLYGEYSVMGISRLYKVKASLISEVRKRLRGKVVMLGIKNRLALKALRE 73
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ + +E+ + L GQ L+FTN + ++ M + E A++G ++T D+ +
Sbjct: 74 AGLEGVEE----LERYLSGQAMLIFTNMNPFELNMLLEQSMVEMPARAGDVATSDIVVPS 129
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
G P I +Q + T + G + + +D V + G+ ++ + A +L L K
Sbjct: 130 GNTGMQPGPILSSFKQFKIPTRIESGSIFVTQDTVVARAGETISADLASLLSKLGLK 186
>gi|145523487|ref|XP_001447582.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415093|emb|CAK80185.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDW--KDSRFFFGKNKVMAYALGKSQEDEIE----- 86
+ KY+ + + + N+ + +++D+R +++ GKN + L +D E
Sbjct: 21 LSKYSQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQDLPEGHEYY 80
Query: 87 ----------KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
K + V+ + + G+ G +FT+ D+ + + E A+ G ++ DV
Sbjct: 81 EDLKKFGAAIKELDVLKNQVAGKVGFVFTDTPVFDLKSVIEENKVETPARVGAVAPIDVV 140
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P SI+ L + T + KG + + KD V K G + QA +L+ L KK
Sbjct: 141 IPPGPTGMDPASIQ-FFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 199
Query: 197 MAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
+ + + Y+ ++L++++ +++ D+
Sbjct: 200 PFLYGMEVLACYDNG-----SILNKQQVSVNLNDV 229
>gi|289583165|ref|YP_003481631.1| 50S ribosomal protein L10 [Natrialba magadii ATCC 43099]
gi|448283369|ref|ZP_21474645.1| acidic ribosomal protein P0 [Natrialba magadii ATCC 43099]
gi|289532718|gb|ADD07069.1| ribosomal protein L10 [Natrialba magadii ATCC 43099]
gi|445574285|gb|ELY28788.1| acidic ribosomal protein P0 [Natrialba magadii ATCC 43099]
Length = 345
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ DEL +E Y ++ + + + + +L+D+R D + +N + AL +
Sbjct: 16 KQEEVDELKALIESYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALESAG 75
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDV 135
D++ + I +GQ GL+ TN + F +Y++ + +K+ G ++ D+
Sbjct: 76 LDDLVEEI-------EGQVGLIGTNDNP------FALYKELEASKTPAPINEGEVAPNDI 122
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+ EG P +L+ +G + G + + +D TV G+ ++ + A +L L
Sbjct: 123 VIPEGDTGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLSAGEEVSADLANVLNEL-- 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+ +V L L EG L D E +DI E D
Sbjct: 181 GIEPKEVGLDLRAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|255719047|ref|XP_002555804.1| 60S acidic ribosomal protein P0 [Lachancea thermotolerans]
gi|238937188|emb|CAR25367.1| KLTH0G17820p [Lachancea thermotolerans CBS 6340]
Length = 311
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR D + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSVFVVGVDNVSSQQMHEVRKDLRGRGVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN S D+ A++G I+ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNDSLKDIKEVITSNVVAAPARAGGIAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGTKVGASEAALLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFVFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|448301560|ref|ZP_21491552.1| acidic ribosomal protein P0 [Natronorubrum tibetense GA33]
gi|445583909|gb|ELY38237.1| acidic ribosomal protein P0 [Natronorubrum tibetense GA33]
Length = 348
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D+L + +E Y ++ + + + + +L+D+R D + +N + +AL + DE+
Sbjct: 21 DDLAELIESYESVGIVGITGIPSKQLQDMRRDLHGTAELRVSRNTLQVHALEDAGLDELV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+I +GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 SHI-------EGQVGLVGTNDNP------FTLYKELEASKTPAPINEGEVAPNDIVVPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + + +L L
Sbjct: 128 DTGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGEEVSADLSNVLNEL 180
>gi|21554645|gb|AAM63644.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
Length = 320
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ +++L+++R DS GKN +M ++
Sbjct: 8 EKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLLGDSVVLMGKNTMMKRSVRI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 HSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 127
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + K+GD + +A +L L +
Sbjct: 128 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFS 186
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 YGLVVQSVYD 196
>gi|20093065|ref|NP_619140.1| acidic ribosomal protein P0 [Methanosarcina acetivorans C2A]
gi|22257020|sp|Q8TI80.1|RLA0_METAC RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|19918389|gb|AAM07620.1| acidic ribosomal protein P0-like protein [Methanosarcina
acetivorans C2A]
Length = 347
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 27 RDEL--VKAVEKYNNIF-VFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQE 82
+DE+ +K + + + +F + ++ + +K++ +R D KD +N + AL
Sbjct: 16 KDEIENIKELIQSHKVFGMVGIEGILATKMQKIRRDLKDVAVLKVSRNTLTERAL----- 70
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
+++ + I + L Q L+FTN S + + + + G I+ D+ +++GP
Sbjct: 71 NQLGETIPGMKEYLDKQTALIFTNESPFKLYKLLEQTKTPSPIRGGAIAPADITVQKGPT 130
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P I +L+ G+ +++ G V + + VCK G+V+ + A +L L+
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEVVPQKLATMLSKLE 182
>gi|168014623|ref|XP_001759851.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688981|gb|EDQ75355.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L++ +E+Y + + + N+ + +L+ +R + DS GKN +M ++
Sbjct: 9 EKKVLYDKKLIQLLEEYTQVLICAADNVGSKQLQSIRKGLRPDSIVLMGKNTMMKRSIRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K+ + AL G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNKDYEELLPALVGNVGLIFTKGDLKEVREEIGKYKVGAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G ++P + L + T +NKG V + + KGD + +A +L L
Sbjct: 129 G-----NTGLDPSQTSFFQVLNIPTKINKGTVEIIAPVELVHKGDKVGSSEAALLAKLGI 183
Query: 196 KMAKFKVLLYLWYN 209
+ + +++ Y+
Sbjct: 184 RPFSYGLVVVNIYD 197
>gi|412991196|emb|CCO16041.1| 60S acidic ribosomal protein P0 [Bathycoccus prasinos]
Length = 315
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
++ Y++ + N+ + + D+R + +S GKN +M +G +++ + V+
Sbjct: 20 LDNYDSALLVHCDNVGSKQFMDIRTALRPNSVVLMGKNTLMRKIIGNYCDEKGNNDWMVL 79
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
L G G++FT +V + AK G +T DV + G P +EP
Sbjct: 80 HDLLIGNVGVIFTKEDVKEVKTKVSEFVVPAPAKVGSTATCDVTIPAGVTP-----LEPS 134
Query: 153 ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+ L + T +NKG + + D TV KG+ + A +L +K ++ +++ Y
Sbjct: 135 QTGFFQLLNIATKINKGAIEILSDVTVVTKGERVGSSAAALLGKMKITPFEYGLVVKHIY 194
Query: 209 NKKEGTFENLLD 220
+K +LD
Sbjct: 195 DKGSMYPAAVLD 206
>gi|448356108|ref|ZP_21544855.1| acidic ribosomal protein P0 [Natrialba hulunbeirensis JCM 10989]
gi|445633322|gb|ELY86510.1| acidic ribosomal protein P0 [Natrialba hulunbeirensis JCM 10989]
Length = 347
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 25/219 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ DEL + +E Y ++ + + + + +L+D+R D + +N + AL +
Sbjct: 16 KQEEVDELEELIESYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALESAG 75
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDV 135
D++ I GQ GL+ TN + F +Y++ + +K+ G ++ D+
Sbjct: 76 LDDLVDEIG-------GQVGLIGTNDNP------FALYKELEASKTPAPINEGEVAPNDI 122
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+ EG P +L+ +G + G + + +D TV G+ ++ + A +L L
Sbjct: 123 VIPEGDTGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLSAGEEVSADLANVLNEL-- 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+ +V L L EG L D E +DI E D
Sbjct: 181 GIEPKEVGLDLRAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|401424461|ref|XP_003876716.1| putative 60S acidic ribosomal subunit protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401430326|ref|XP_003886550.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492959|emb|CBZ28241.1| putative 60S acidic ribosomal subunit protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|356491450|emb|CBZ40973.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 322
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ D LV + KY+ + + N+R+ ++ DVR + + F GK + A + K
Sbjct: 8 KREYEDRLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFMMGKKTLQAKIVEKRA 67
Query: 82 E------------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
+ D+ E+ + L G GL+FTN + ++ D + + A+ G
Sbjct: 68 QAKDASPDAKHFNDQCEE-----YNLLSGNTGLVFTNNAVQEITSVLDAHRVKAPARVGA 122
Query: 130 ISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
I+ DV +P +EP + L + T + KG+V + + V GD +
Sbjct: 123 IAPCDV-----VVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLNTGDKVDNS 177
Query: 186 QARILKLLKKKMAKFKV-LLYLW 207
A +L+ L ++V +L +W
Sbjct: 178 TATLLQKLNISPFYYQVNVLSVW 200
>gi|357145407|ref|XP_003573632.1| PREDICTED: 60S acidic ribosomal protein P0-like [Brachypodium
distachyon]
Length = 323
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L + +++Y + V S ++ +++L +R + +S GKN ++ + D +N
Sbjct: 21 LCQLLDEYPKVLVASANHVGSTQLAAIRRGIRGESVMLMGKNTLIRRCINVHAVDTGNEN 80
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
I + L+G GL+FT +V Y+ A+ G I+ DV + G P
Sbjct: 81 IKALVPLLQGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLIAPIDVVVPAGNTGLDPTQ 140
Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+ L + T +NKG V + + + KKGD + +A +L L + + +++ Y
Sbjct: 141 TS-FFQVLNIPTKINKGTVEIIANVDLIKKGDKVGSSEAALLAKLGIRPFSYGLVITQVY 199
Query: 209 N 209
+
Sbjct: 200 D 200
>gi|118486293|gb|ABK94988.1| unknown [Populus trichocarpa]
gi|118487741|gb|ABK95694.1| unknown [Populus trichocarpa]
Length = 320
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ E K
Sbjct: 17 KLCQLLDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTANK 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L+G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 77 AFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPS 136
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
+ L + T +NKG V + + KKGD + +A +L L + + +++
Sbjct: 137 QTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSA 195
Query: 208 YN 209
Y+
Sbjct: 196 YD 197
>gi|429963072|gb|ELA42616.1| hypothetical protein VICG_00368 [Vittaforma corneae ATCC 50505]
Length = 263
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEK 87
EL A E Y + S++ +++++LKDV+ + +F KNK+M AL ED K
Sbjct: 19 ELFSAHENY---MLLSIKRVKSTQLKDVKAEIGSKVKFLIAKNKIMKKAL----EDLDAK 71
Query: 88 NIHVVSSALKGQCGL-LFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ S L G + F N +L + A G I+ DV + GP P
Sbjct: 72 KYANLISMLHGNVIVAFFGNADPRTILDASKHNMRKALAVPGDIAPNDVIIPAGPTGLGP 131
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
I + + T +NKG + L DH + GD+++ AR+L +L
Sbjct: 132 EKIN-IFQAAKIVTKINKGKIDLANDHKLLSGGDIVSISNARLLTML 177
>gi|282164746|ref|YP_003357131.1| acidic ribosomal protein P0 homolog [Methanocella paludicola SANAE]
gi|282157060|dbj|BAI62148.1| acidic ribosomal protein P0 homolog [Methanocella paludicola SANAE]
Length = 303
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
E+V V + + V+ + L+ +R + + +N + A ED+ +
Sbjct: 22 EIVDNVHSHKVTGIVDVRGVPADALQQMRQKLRGTVAMKMIRNTLTTIAFDSLPEDDKAR 81
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ + + GQ L++TN + + + + + AKSG + DV + +GP P
Sbjct: 82 EL---AKYVDGQIVLVYTNSNPFKLYKLLEGTKTKAPAKSGDTAPADVAVSKGPTSFKPG 138
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
I +++Q G+ + G V + D V KKGD T +QA IL L
Sbjct: 139 PIVGEMQQAGIPAGIEGGKVVIKSDKVVVKKGDKFTAKQAEILGRL 184
>gi|300122472|emb|CBK23042.2| unnamed protein product [Blastocystis hominis]
Length = 320
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L + +E+YN IFV ++++ + ++ D+R + + FGK ++ + K
Sbjct: 5 QKKALYFQKLHQILEEYNKIFVVEIKHVTSKQVADIRKALRGQALLLFGKKTMIRRCMNK 64
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + + G GL+F N +V + A+ G ++ DV +
Sbjct: 65 FVEEHPGHPIEKLIPLVHGNVGLVFVNGDMANVREIILNNKVPAPARVGVVAHVDVIVPA 124
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
GP P + L + T +N+G + + D + G + P QA +L
Sbjct: 125 GPTGCDPGQTS-WFQALNIATKINRGQIEIINDVPLILAGQKVQPGQAALL 174
>gi|302753674|ref|XP_002960261.1| hypothetical protein SELMODRAFT_229877 [Selaginella moellendorffii]
gi|300171200|gb|EFJ37800.1| hypothetical protein SELMODRAFT_229877 [Selaginella moellendorffii]
Length = 323
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALG 78
LE+K+ +L K ++ Y + + N+ +++++ +R + DS GKN +M +
Sbjct: 8 LEKKEAYDLKLCKYLDDYGRALICAADNVGSNQMQQIRQGLRPDSVVLMGKNTLMKRTIR 67
Query: 79 KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
K E +++ + L G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 KYAEKTGNRDVLNLIPLLVGNVGLVFTRGDLKEVREVIAKYKVGAPARVGLVAPIDVTIQ 127
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
G P S + L + T +NKG V + + KG + +A +L L+ +
Sbjct: 128 PGSTGLDP-SHTSFFQALNIPTKINKGTVEIVSSVELISKGTKVGSSEAALLAKLRIRPF 186
Query: 199 KFKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 SYGLVVRRVYD 197
>gi|448351783|ref|ZP_21540577.1| acidic ribosomal protein P0 [Natrialba taiwanensis DSM 12281]
gi|445632343|gb|ELY85555.1| acidic ribosomal protein P0 [Natrialba taiwanensis DSM 12281]
Length = 351
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 25/219 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ D+L +E Y ++ + + + + +L+D+R D + +N + AL +
Sbjct: 16 KQEEVDDLEALIENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALETAG 75
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDV 135
D++ N+ +GQ GL+ TN + F +Y++ + +K+ G ++ D+
Sbjct: 76 LDDLVDNV-------EGQVGLIGTNDNP------FTLYKELEASKTPAPINEGEVAPNDI 122
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+ EG P +L+ +G + G + + +D TV + G ++ + A +L L
Sbjct: 123 VIPEGDTGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNEL-- 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+ +V L L EG L D E +DI E D
Sbjct: 181 GIEPKEVGLDLRAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|448398440|ref|ZP_21570089.1| acidic ribosomal protein P0 [Haloterrigena limicola JCM 13563]
gi|445671455|gb|ELZ24043.1| acidic ribosomal protein P0 [Haloterrigena limicola JCM 13563]
Length = 346
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
DEL + + +Y ++ + + + + +L+D+R D + +N + AL + D++
Sbjct: 21 DELAEIISEYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQTRALEDAGLDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I +GQ G++ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHI-------EGQVGIVGTNENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + +G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|118487755|gb|ABK95701.1| unknown [Populus trichocarpa]
Length = 322
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ E K
Sbjct: 17 KLCQLLDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNK 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L+G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 77 TFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPS 136
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMAKFKVLLYL 206
+ L + T +NKG V + + KKGD V + E A + KL + + V+L +
Sbjct: 137 QTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSV 195
Query: 207 WYN 209
+ N
Sbjct: 196 YDN 198
>gi|448310518|ref|ZP_21500344.1| acidic ribosomal protein P0 [Natronolimnobius innermongolicus JCM
12255]
gi|445607913|gb|ELY61785.1| acidic ribosomal protein P0 [Natronolimnobius innermongolicus JCM
12255]
Length = 347
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-GKS 80
KQ DEL +E Y ++ + + + + +L+D+R D + +N + AL G
Sbjct: 16 KQEEVDELEAIIESYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEGTG 75
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTED 134
ED +++ ++GQ G++ TN + F +Y++ + +K+ G ++ D
Sbjct: 76 LEDLVDQ--------VEGQVGIIGTNENP------FSLYKELEASKTPAPINEGEVAPND 121
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ + EG P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 122 IVIPEGDTGIDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGEEVSVDLANVLNEL 180
>gi|307110053|gb|EFN58290.1| hypothetical protein CHLNCDRAFT_59607 [Chlorella variabilis]
Length = 314
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALG 78
L +K+ +L + ++ Y+ F+ N+ + + D+R +D SR GKN +M ++
Sbjct: 7 LVKKEAYDAKLCEMMDTYDRAFLVHADNVGSKQFMDIRAAIRDHSRILMGKNTMMRRSIR 66
Query: 79 KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
E + + G GL+FT ++V D ++ A+ G ++ DV +
Sbjct: 67 LYCERTGNDQWLQLLGHMVGNVGLIFTKGDLNEVRKLIDDFKVGAPARVGLVAPNDVTIP 126
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
G P S + L + T +NKG V + D + K GD + +A +L L K
Sbjct: 127 GGNTGMDP-SQTSFFQVLNIPTKINKGSVEITADVHLIKTGDKVGASEATLLAKLGIKPF 185
Query: 199 KFKVLLYLWYN 209
+ +++ Y+
Sbjct: 186 SYGLVILQVYD 196
>gi|253745730|gb|EET01466.1| Acidic ribosomal protein P0 [Giardia intestinalis ATCC 50581]
Length = 326
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS 80
R+Q +L + + +Y I + SV N+R+ ++ +R + + GKN ++ + +
Sbjct: 12 RRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVINQL 71
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+D+++K + + K G +FTN +L F + + AK+G I+ DV
Sbjct: 72 NDDKLKKLLPYI----KLNVGFVFTNGDTSAILKAFKKTKRKAAAKAGIIAPTDV----- 122
Query: 141 PLPEFPHSIEPQLRQ-----------LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
IEP L Q LG+ T +NKG + + + KKGDV+TP A +
Sbjct: 123 -------VIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDVVTPSHATL 175
Query: 190 LKLLK 194
L+ L+
Sbjct: 176 LQKLE 180
>gi|224101117|ref|XP_002312149.1| predicted protein [Populus trichocarpa]
gi|222851969|gb|EEE89516.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ E K
Sbjct: 17 KLCQLLDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNK 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L+G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 77 TFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPS 136
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMAKFKVLLYL 206
+ L + T +NKG V + + KKGD V + E A + KL + + V+L +
Sbjct: 137 QTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSV 195
Query: 207 WYN 209
+ N
Sbjct: 196 YDN 198
>gi|145525288|ref|XP_001448466.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416010|emb|CAK81069.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDW--KDSRFFFGKN----KVMAYALGK-SQEDEIE 86
+ KY + + + N+ + +++D+R +++ GKN KV+A + + +E E
Sbjct: 21 LSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNTLFKKVLATRVQELPKEHEYY 80
Query: 87 KNIHVVSSALK----------GQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
+++ SA+K G+ G +FT+ D+ + + E A+ G ++ DV
Sbjct: 81 EDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVV 140
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P SI+ L + T + KG + + KD V K G + QA +L+ L KK
Sbjct: 141 IPPGPTGMDPASIQ-FFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 199
Query: 197 MAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
+ + + Y+ ++L++++ +++ D+
Sbjct: 200 PFLYGMEVLACYDNG-----SILNKQQVSVNLNDI 229
>gi|257051343|ref|YP_003129176.1| acidic ribosomal protein P0 [Halorhabdus utahensis DSM 12940]
gi|256690106|gb|ACV10443.1| ribosomal protein L10 [Halorhabdus utahensis DSM 12940]
Length = 350
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVR-NDWKDSRFFFGKNKVMAYALGKSQEDEIE 86
D++V+ ++ Y+++ V + + + +L+D+R N + + +N ++ AL +E++
Sbjct: 21 DDVVEMIDAYDSVGVVDLAGIPSQQLQDMRRNLYGTAEIRVSRNTLVERAL-----NEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + + + G GL+ T+ + + + + +G ++ D+E+ EG P
Sbjct: 76 EGLDTLVDFVSGHVGLIGTDDNPFSLYQQLEASKTSAPINAGEVAPNDIEIPEGDTGIDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+ +G + +G + + +D TV + G ++ + A +L L
Sbjct: 136 GPFVGELQSVGANARIQEGSIQVLEDSTVLEAGGEVSADLANVLGEL 182
>gi|146090844|ref|XP_001466374.1| putative 60S acidic ribosomal subunit protein [Leishmania infantum
JPCM5]
gi|146091271|ref|XP_001466487.1| 60S acidic ribosomal subunit protein [Leishmania infantum JPCM5]
gi|398017826|ref|XP_003862100.1| unnamed protein product [Leishmania donovani]
gi|134070736|emb|CAM69091.1| putative 60S acidic ribosomal subunit protein [Leishmania infantum
JPCM5]
gi|134070849|emb|CAM69208.1| 60S acidic ribosomal subunit protein [Leishmania infantum JPCM5]
gi|322500328|emb|CBZ35406.1| unnamed protein product [Leishmania donovani]
Length = 323
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + LV + KY+ + + N+R+ ++ DVR + + F GK + A + K
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFIMGKKTLQAKIVEKRA 67
Query: 82 E------------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
+ D+ E+ + L G GL+FTN + ++ D + + A+ G
Sbjct: 68 QAKDASPEAKRFNDQCEE-----YNLLSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGA 122
Query: 130 ISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
IS DV +P +EP + L + T + KG+V + + V GD +
Sbjct: 123 ISPCDV-----VVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNS 177
Query: 186 QARILKLLKKKMAKFKV-LLYLW 207
A +L+ L ++V +L +W
Sbjct: 178 TATLLQKLNISPFYYQVNVLSVW 200
>gi|389593389|ref|XP_003721948.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|389593391|ref|XP_003721949.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|321438450|emb|CBZ12206.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
gi|321438451|emb|CBZ12207.1| putative 60S acidic ribosomal subunit protein [Leishmania major
strain Friedlin]
Length = 323
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + LV + KY+ + + N+R+ ++ DVR + + F GK + A + K
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFMMGKKTLQAKIVEKRA 67
Query: 82 E--DEIEKNIHVVSSA-----LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTED 134
+ D + H L G GL+FTN + ++ D + + A+ G IS D
Sbjct: 68 QAKDASAEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGAISPCD 127
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V +P +EP + L + T + KG+V + + V GD + A +L
Sbjct: 128 V-----IVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLL 182
Query: 191 KLLKKKMAKFKV-LLYLW 207
+ L ++V +L +W
Sbjct: 183 QKLNISPFYYQVNVLSVW 200
>gi|118576434|ref|YP_876177.1| ribosomal protein L10 [Cenarchaeum symbiosum A]
gi|118194955|gb|ABK77873.1| ribosomal protein L10 [Cenarchaeum symbiosum A]
Length = 274
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 100/208 (48%), Gaps = 10/208 (4%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFG-KNKVMAYALGKSQEDEIEKNIHVVSS 94
K+ + + ++++R S++ +R +DS FF K+KV AL K+ ++K +
Sbjct: 11 KHKVMALVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAKTDVPGMDKMMD---- 66
Query: 95 ALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLR 154
L GQC +FT+ S + + + A++G I++ DV + P + + +
Sbjct: 67 QLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFK 126
Query: 155 QLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGT 214
+ G+ T +++G + + KD T KKG+ + + A +L L K + ++ L +EG
Sbjct: 127 EAGIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIK--PVEAVIALESALEEGV 184
Query: 215 FENLLDREKTPMDIYDMEDDENNSNEES 242
+ RE +D+ + +++E+
Sbjct: 185 ---IYSREDLAVDVEAIRAGFAQAHQEA 209
>gi|388517655|gb|AFK46889.1| unknown [Medicago truncatula]
Length = 323
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQ +L + ++K+ I + + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKQAYDVKLCQLLDKFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNAMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 184 RPFSYGLVVLSVYDN 198
>gi|444518096|gb|ELV11954.1| Transmembrane protein 56 [Tupaia chinensis]
Length = 201
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 12 LSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNK 71
L++ ++ LE KQNL +L K V Y +F+FS+ +M KD RN WK + FFGKNK
Sbjct: 17 LNQNCQERLEPKQNLIQKLQKRVHMYKYLFIFSMASM-----KDTRNTWKHNWMFFGKNK 71
Query: 72 V 72
V
Sbjct: 72 V 72
>gi|219850848|ref|YP_002465280.1| acidic ribosomal protein P0 [Methanosphaerula palustris E1-9c]
gi|219545107|gb|ACL15557.1| ribosomal protein L10 [Methanosphaerula palustris E1-9c]
Length = 284
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIH 90
K + ++ + + + + ++L+ +R + + + +N ++ +AL EI ++
Sbjct: 21 KHIGQFTLVGLVDMHGIPATQLQQIRRNLRGIATIKMTRNTLVLHALA-----EIGGDLE 75
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ + G ++FTN + + + + AK+G I+ ED+ + +GP P I
Sbjct: 76 AIKDYISGNSAMIFTNENPFKLYKLLAKTQTKMAAKAGQIAPEDIVVPKGPTSFKPGPIV 135
Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+L+Q G+ + G V + + TV K G V+ + A +L L K ++L +
Sbjct: 136 GELQQAGIPAAIEAGKVKIKETKTVVKAGGVINAKLATVLAKLDIKPVDVGLMLQAAF 193
>gi|356539947|ref|XP_003538454.1| PREDICTED: 60S acidic ribosomal protein P0-like [Glycine max]
Length = 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L K ++ Y I V + N+ +++L+++R+ + DS GKN +M ++
Sbjct: 9 QKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNTMMKRSIKI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ + I + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAQNTGDTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KGD + +A +L L +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIVTPVELIMKGDKVGSSEAVLLSKLAIRPFS 187
Query: 200 FKVLLYLWYN 209
+ + + Y+
Sbjct: 188 YGLAVVSVYD 197
>gi|161899289|ref|XP_001712871.1| ribosomal protein L10 [Bigelowiella natans]
gi|75756365|gb|ABA27259.1| ribosomal protein L10 [Bigelowiella natans]
Length = 251
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
++ + + + + Y+ + + ++ N+R+ ++ D+R + S GK ++Y L Q
Sbjct: 5 RKKVAQKFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLL---Q 61
Query: 82 EDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+++E + + V L GL+FTN + + F Y F +G I+ ++ +K+G
Sbjct: 62 NNKLEMSRWMSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKG 121
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
+ S P + LG+ T ++K + + +D + K L Q +LK L K K+
Sbjct: 122 -IKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKY 180
Query: 201 KV 202
V
Sbjct: 181 GV 182
>gi|224109342|ref|XP_002315165.1| predicted protein [Populus trichocarpa]
gi|222864205|gb|EEF01336.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ E K
Sbjct: 17 KLCQLLDEYSQILIAAADNVGSTQLQNIRRGLRGDSVVLMGKNTMMKRSVRIHSEKTGNK 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L+G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 77 AFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPS 136
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
+ L + T +NKG V + + KKGD + +A +L L + + +++
Sbjct: 137 QTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSA 195
Query: 208 YN 209
Y+
Sbjct: 196 YD 197
>gi|449516071|ref|XP_004165071.1| PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]
Length = 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y+ + V + N+ +++L+++R + DS GKN +M ++
Sbjct: 9 EKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 184 RPFSYGLVVLSVYDN 198
>gi|6984134|gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphorbia esula]
Length = 317
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + ++ Y+ I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 6 EKKIAYDAKLCQLLDDYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRV 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L+G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 66 HSEKTGNTAFLNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKGD + +A +L L +
Sbjct: 126 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 184
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 185 YGLVVQTVYD 194
>gi|302768062|ref|XP_002967451.1| hypothetical protein SELMODRAFT_87354 [Selaginella moellendorffii]
gi|300165442|gb|EFJ32050.1| hypothetical protein SELMODRAFT_87354 [Selaginella moellendorffii]
Length = 323
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALG 78
LE+K+ +L K ++ Y + + N+ +++++ +R + DS GKN +M +
Sbjct: 8 LEKKEAYDLKLCKYLDDYARALICAADNVGSNQMQQIRQGLRPDSVVLMGKNTLMKRTIR 67
Query: 79 KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
K E +++ + L G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 68 KYAEKTGNRDVLNLIPLLVGNVGLVFTRGDLKEVREVIAKYKVGAPARVGLVAPIDVTIQ 127
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
G P S + L + T +NKG V + + KG + +A +L L+ +
Sbjct: 128 PGSTGLDP-SHTSFFQALNIPTKINKGTVEIVSSVELISKGTKVGSSEAALLAKLRIRPF 186
Query: 199 KFKVLLYLWYN 209
+ +++ Y+
Sbjct: 187 SYGLVVRRVYD 197
>gi|145501794|ref|XP_001436877.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404022|emb|CAK69480.1| unnamed protein product [Paramecium tetraurelia]
Length = 323
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDW--KDSRFFFGKN----KVMAYALGK-SQEDEIE 86
+ KY + + + N+ + +++D+R K++ GKN KV+A + + +E E
Sbjct: 21 LSKYTQVIIVGLANVGSKQVQDIRRILAKKNALLVIGKNTLFKKVLATRVQELPKEHEYY 80
Query: 87 KNIHVVSSALK----------GQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
+++ +A+K G+ G +FT D+ + + E A+ G I+ DV
Sbjct: 81 EDLAKFGNAIKELDALKNSVAGKVGFIFTETPVFDLKPIIEENKVETPARVGAIAPIDVV 140
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P SI+ L + T + KG + + KD V K G + QA +L+ L KK
Sbjct: 141 IPPGPTGMDPASIQ-FFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 199
Query: 197 MAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDM 231
+ + + Y+ ++L++++ +++ D+
Sbjct: 200 PFLYGMEVLACYDNG-----SILNKQQVSVNLNDI 229
>gi|340905014|gb|EGS17382.1| ribosomal protein P0-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 312
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IFV SV N+ + ++ ++R + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYPSIFVVSVDNVSSQQMHEIRKALRGQGVVLMGKNTMVRRALKTFM 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN +V + A++G I+ DV +
Sbjct: 68 PDHPEYERLLPFV----KGNVGFVFTNGDLKEVREKILSNRIKAPARAGAIAPVDVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGIPTKIARGTIEITTDIKLVEAGAKVGPSEATLLNML 176
>gi|269986836|gb|EEZ93114.1| ribosomal protein L10 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 281
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 18 KGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYAL 77
+G +K+ + +EL K ++ Y I + + + + ++ ++ F NKV+ +
Sbjct: 5 RGSLQKEKMAEELNKKIKGYKTIGIVEIAGYPSESFERIKKVFRGKADFVYANKVVIFNA 64
Query: 78 GKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK--SGFISTEDV 135
++ + + V + LL +N +D + + E+ F K SG IS D+
Sbjct: 65 INKAGIKLSEKVEEVKMPV-----LLLSN--EDPFELAKEAMENTTFTKLKSGEISQMDI 117
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
L GP P P + Q +G++T G +++ D T+ KKG+ + + A IL
Sbjct: 118 VLPSGPTPFPPGPMLSQFSSIGVKTKNESGKISIVSDTTIVKKGEKVNEKIASIL 172
>gi|448475573|ref|ZP_21603154.1| acidic ribosomal protein P0 [Halorubrum aidingense JCM 13560]
gi|445816333|gb|EMA66237.1| acidic ribosomal protein P0 [Halorubrum aidingense JCM 13560]
Length = 345
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSR-FFFGKNKVMAYALGKSQ 81
KQ+ DELV+ ++ +N++ + V + + +L+ +R + S +N + AL
Sbjct: 14 KQDEVDELVEFIDSFNSVGIVGVAGIPSRQLQAMRRELHGSADVRMSRNTLTVRAL---- 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
+E++ + ++ + GQ L+ TN + + + + +G ++ DV + EG
Sbjct: 70 -EEVDAGVEELTQYVSGQVALIGTNDNPFGLFKQLEASKTPAPISAGEVAPNDVVIPEGD 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D V ++G+V+ + A +L L
Sbjct: 129 TGVDPGPFVGELQTVGAAARIQDGSIMVTEDSKVLEEGEVVDEDLANVLTEL 180
>gi|432329854|ref|YP_007247997.1| ribosomal protein L10 [Methanoregula formicicum SMSP]
gi|432136563|gb|AGB01490.1| ribosomal protein L10 [Methanoregula formicicum SMSP]
Length = 282
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
E+ K ++Y I + + + +++ +R + + +N ++ +A DEI
Sbjct: 18 EIKKNAKEYKLIGLVDMYGIPAQQVQQIRRNLRGKAVIKMTRNTLIKHAF-----DEIGG 72
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
++ ++ L G ++FTN + + + + + AK+G + ED+ + GP P
Sbjct: 73 DLKNLTKYLSGHSAIIFTNDNPFKLYKQLEKTKTKMAAKAGEKAPEDIVVPAGPTSFKPG 132
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
I +L+Q G+ + G V + + TV KKG V+ P+ A L
Sbjct: 133 PIVGELQQAGIPAAIEGGKVKIRETKTVVKKGAVINPKLAAAL 175
>gi|448306356|ref|ZP_21496262.1| acidic ribosomal protein P0 [Natronorubrum bangense JCM 10635]
gi|445598211|gb|ELY52275.1| acidic ribosomal protein P0 [Natronorubrum bangense JCM 10635]
Length = 346
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
DEL ++ Y ++ + + + + +L+D+R D + +N + AL ++ D++
Sbjct: 21 DELTSLIDSYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEETGLDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+I +GQ GL+ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 THI-------EGQVGLIATDDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + +G + + +D TV + G+ ++ + + +L L +
Sbjct: 128 DTGVDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGEQVSADLSNVLSEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EG L D E +DI E D
Sbjct: 186 EVGLDLQAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|290559519|gb|EFD92849.1| ribosomal protein L10 [Candidatus Parvarchaeum acidophilus ARMAN-5]
Length = 281
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 17/179 (9%)
Query: 18 KGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYA- 76
+G +K+ +EL ++KY + + + + + ++ ++D F NKV+ +
Sbjct: 5 RGSTQKEKKSEELQNRIKKYKTVGLVEMLGYPSESFEKMKKIFRDKAEFIYTNKVVISSA 64
Query: 77 ---LGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK--SGFIS 131
L +D+I+ V LL +N +D + + ++ F+K +G IS
Sbjct: 65 LKKLNAPLKDKIDDTKMPV---------LLLSN--EDPFELSSEAMQNSTFSKLKTGEIS 113
Query: 132 TEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
D+ L GP P P + Q +G++T G +++ D T+ KKGD ++ + A IL
Sbjct: 114 EADIVLPAGPTPFPPGPMLSQFSSIGVKTKNESGKISIISDTTIVKKGDKISEKIASIL 172
>gi|449463036|ref|XP_004149240.1| PREDICTED: 60S acidic ribosomal protein P0-like [Cucumis sativus]
Length = 320
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y+ + V + N+ +++L+++R + DS GKN +M ++
Sbjct: 9 EKKVAYDSKLCQLLDEYSQVLVVAADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSEQTGNKAYLNLLPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 184 RPFSYGLVVLSVYDN 198
>gi|448433366|ref|ZP_21585887.1| acidic ribosomal protein P0 [Halorubrum tebenquichense DSM 14210]
gi|445686379|gb|ELZ38703.1| acidic ribosomal protein P0 [Halorubrum tebenquichense DSM 14210]
Length = 349
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV ++ YN++ + V + + +L+ +R + S +N + AL +E++
Sbjct: 19 DELVDFIDSYNSVGIVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLTNRAL-----EEVD 73
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ ++ + GQ L+ TN + + + + G ++ D+ + EG P
Sbjct: 74 DGVEALTEYVGGQVALVGTNDNPFGLFKQLEASKTPAPINEGEVAPNDIVIPEGDTGVDP 133
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+L+ +G + G + + +D TV +G+V+ + A +L
Sbjct: 134 GPFVGELQTVGAAARIQDGSIKVTEDSTVLTEGEVVDADLANVL 177
>gi|448535933|ref|ZP_21622317.1| acidic ribosomal protein P0 [Halorubrum hochstenium ATCC 700873]
gi|445702742|gb|ELZ54683.1| acidic ribosomal protein P0 [Halorubrum hochstenium ATCC 700873]
Length = 347
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV ++ YN++ + V + + +L+ +R + S +N + AL +E++
Sbjct: 19 DELVDFIDSYNSVGIVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLTNRAL-----EEVD 73
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ ++ + GQ L+ TN + + + + G ++ D+ + EG P
Sbjct: 74 DGVEALTEYVSGQVALVGTNDNPFGLFKQLEASKTPAPINEGEVAPNDIVIPEGDTGVDP 133
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+L+ +G + G + + +D TV +G+V+ + A +L
Sbjct: 134 GPFVGELQTVGAAARIQDGSIKVTEDSTVLTEGEVVDADLANVL 177
>gi|13541252|ref|NP_110940.1| acidic ribosomal protein P0 [Thermoplasma volcanium GSS1]
gi|17865549|sp|Q97BN3.1|RLA0_THEVO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|14324637|dbj|BAB59564.1| ribosomal protein large subunit P0 [Thermoplasma volcanium GSS1]
Length = 314
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQ 81
+K+ + EL + + K + + ++ +R +++D+R +D K + + S
Sbjct: 7 KKKEIVSELAQDITKSKAVAIVDIKGVRTRQMQDIRAKNRDKVKIKVVKKTLLFKALDSI 66
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
DE + + A GQ +L + ++ + + G ++ D+ ++
Sbjct: 67 NDE---KLTKLKDATTGQIAVLTSQLDPTEIYQMVQATLTKASPRGGEVAPADITVEPMV 123
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + + +++GLQT + KG + + K+ + KKG+V+ ++A+I+ +L
Sbjct: 124 TGFPPGPMMTEFQKVGLQTGVEKGKIAIKKEAVLVKKGEVIPKDKAKIMAML 175
>gi|149024424|gb|EDL80921.1| rCG31507, isoform CRA_d [Rattus norvegicus]
Length = 66
Score = 50.1 bits (118), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDEL 30
MPKSKRDKKV+L+KT KKGLE KQNL +E+
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEEV 30
>gi|448395918|ref|ZP_21569012.1| acidic ribosomal protein P0 [Haloterrigena salina JCM 13891]
gi|445660499|gb|ELZ13295.1| acidic ribosomal protein P0 [Haloterrigena salina JCM 13891]
Length = 349
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ-EDEI 85
DEL + +E Y+++ + + + + +L+D+R D + +N + AL +S ED +
Sbjct: 21 DELQEIIESYDSVGIVGITGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEQSGLEDLV 80
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKE 139
+ HV +GQ G++ TN + F +Y++ + +K+ G ++ D+ + E
Sbjct: 81 D---HV-----EGQVGIVGTNDNP------FTLYKELEASKTPAPINEGEVAPNDIVIPE 126
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + +D TV + G ++ + A +L L
Sbjct: 127 GDTGVDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGGEVSADLANVLNEL 180
>gi|327311565|ref|YP_004338462.1| 50S ribosomal protein L10 [Thermoproteus uzoniensis 768-20]
gi|326948044|gb|AEA13150.1| ribosomal protein L10 [Thermoproteus uzoniensis 768-20]
Length = 343
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGK 79
++K + EL + V+ YN IFVF + + L + R + K+ +M AL K
Sbjct: 18 QKKAKIASELEELVKSYNYIFVFDLHGLSARILHEYRFRLRGKGVVKVAKHNLMRIAL-K 76
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ + V L G+ +FTN + + A++G ++ D+
Sbjct: 77 RVYGEVPPD---VDRELFGERAYIFTNENPALFAKEVEAKAVRRKARAGDVAPYDIMAPA 133
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL--KKKM 197
GP P I + +L + T + +G + + KD V K G +T E A IL++L +
Sbjct: 134 GPTNLSPGPILSKFGKLKIPTRVQEGKIWIAKDSPVVKAGQQITDEIADILRVLGVEPIY 193
Query: 198 AKFKVLLYLWYNKK 211
K ++L +W ++
Sbjct: 194 EKLRLLGVIWRGRR 207
>gi|171186103|ref|YP_001795022.1| acidic ribosomal protein P0 [Pyrobaculum neutrophilum V24Sta]
gi|170935315|gb|ACB40576.1| ribosomal protein L10 [Pyrobaculum neutrophilum V24Sta]
Length = 341
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 7/194 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKS 80
+RK + +E + ++KY +F+F + + + L + R + +G+ KV+ L K
Sbjct: 17 QRKTRIVEEATELLKKYQYVFLFDLHGLSSRILNEYRYRLRR----YGEVKVIKPTLFKI 72
Query: 81 QEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ + V+ ++G+ FTN + +V+ A+ G + D+ +
Sbjct: 73 AFAKAFGGVPAEVAERVRGEVAFFFTNVNPAEVVKIVAENSVRRAAQPGDKAPFDIVVPA 132
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL--LKKKM 197
GP P I + +L + T + +G + + KD V K G +T E A +L++ ++
Sbjct: 133 GPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITAEIAEVLRVVGIEPVF 192
Query: 198 AKFKVLLYLWYNKK 211
+ ++L +W +
Sbjct: 193 EQLRLLGVIWRGSR 206
>gi|300711074|ref|YP_003736888.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|448296830|ref|ZP_21486880.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|299124757|gb|ADJ15096.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
gi|445580507|gb|ELY34885.1| acidic ribosomal protein P0 [Halalkalicoccus jeotgali B3]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 12 LSKTVKKGLERKQNLR-------DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS- 63
+S T +G + +NL DELV+ ++ Y ++ V ++ + + +L+++R D S
Sbjct: 1 MSTTQAEGERKTENLPEWKREEVDELVEMLDSYESVGVVNIAGIPSRQLQNMRRDLHGSA 60
Query: 64 RFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDED 123
+N ++ AL + ++ + ++ + GQ G++ TN + F +Y+ +
Sbjct: 61 ELRVSRNTLLTRAL-----EAVDDGLEQLTGHVAGQVGVIGTNDNP------FGLYKQLE 109
Query: 124 FAKS------GFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177
+KS G ++ D+ + EG P +L+Q+G + G + + +D V
Sbjct: 110 ESKSPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGELQQVGAAARIQDGSIHVTEDSQVLS 169
Query: 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDI 228
+G+ ++ + + +L L + + + L Y+ EG L D E +D+
Sbjct: 170 EGEEVSQDLSNVLSELGIEPKEVGLDLRSVYS--EGI---LFDPEDLAIDV 215
>gi|284164798|ref|YP_003403077.1| 50S ribosomal protein L10 [Haloterrigena turkmenica DSM 5511]
gi|284014453|gb|ADB60404.1| ribosomal protein L10 [Haloterrigena turkmenica DSM 5511]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ-EDEI 85
DEL + +E Y+++ + + + + +L+D+R D + +N + AL +S ED +
Sbjct: 21 DELQEIIESYDSVGIVGITGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEQSGLEDLV 80
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKE 139
E HV +GQ G++ TN + F +Y++ + +K+ G ++ D+ + E
Sbjct: 81 E---HV-----EGQVGIVGTNDNP------FTLYKELEASKTPAPINEGEVAPNDIVIPE 126
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P +L+ +G + +G + + +D TV + G ++ + + +L L
Sbjct: 127 GDTGVDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGGEVSADLSNVLNEL 180
>gi|452207771|ref|YP_007487893.1| 50S ribosomal protein L10 [Natronomonas moolapensis 8.8.11]
gi|452083871|emb|CCQ37198.1| 50S ribosomal protein L10 [Natronomonas moolapensis 8.8.11]
Length = 352
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
D +V+ +E Y +I V + + + +L+D+R + + +N ++ AL E+
Sbjct: 21 DAIVEFLESYGSIGVVDITGIPSKQLQDMRRELHGTAALRVSRNTLIERALA-----EVG 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ ++ + GQ GL+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGLEGIAEHVDGQVGLIGTNDNPFGLYQQLEASKTPAPINAGEVTPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
L+ +G ++ G + + +D TV G+ ++ + A +L L
Sbjct: 136 GPFVGDLQTVGANARIDGGSIKVVEDSTVLSAGEEVSADLANVLAEL 182
>gi|302785041|ref|XP_002974292.1| hypothetical protein SELMODRAFT_149765 [Selaginella moellendorffii]
gi|302807947|ref|XP_002985667.1| hypothetical protein SELMODRAFT_181962 [Selaginella moellendorffii]
gi|300146576|gb|EFJ13245.1| hypothetical protein SELMODRAFT_181962 [Selaginella moellendorffii]
gi|300157890|gb|EFJ24514.1| hypothetical protein SELMODRAFT_149765 [Selaginella moellendorffii]
Length = 318
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K+ ++V +E Y+ + + N+ +++L+ +R + +S GKN +M +
Sbjct: 9 EKKEVYDRKMVDLLETYSKALICAADNVGSNQLQQIRRGLRPESVVLMGKNTLMKRTIRT 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAEKSGNTTVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKG+ + +A +L L +
Sbjct: 129 GSTGLDPSQTS-FFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIRPFS 187
Query: 200 FKVLLYLWYN 209
+ +++ + Y+
Sbjct: 188 YGLVVQMVYD 197
>gi|448414178|ref|ZP_21577317.1| acidic ribosomal protein P0 [Halosarcina pallida JCM 14848]
gi|445682471|gb|ELZ34888.1| acidic ribosomal protein P0 [Halosarcina pallida JCM 14848]
Length = 348
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V SV + + +L+ +R + S +N ++ AL +++
Sbjct: 22 DELVDFLENYESVGVVSVTGIPSRQLQSMRRELHGSAALRMSRNTLLTRAL-----EDVN 76
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ ++ + GQ L+ TN + F +Y++ + +K +G ++ D+ + EG
Sbjct: 77 DGLEQLTEFVYGQVALVGTNDNP------FGLYKELEASKTPAPINAGEVAPNDIVIPEG 130
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+Q+G + G + + +D V +G+V++ E A +L L
Sbjct: 131 DTGVDPGPFVGELQQVGASARIMDGSIKVTEDSHVLDEGEVVSEELANVLAEL 183
>gi|313586451|gb|ADR71236.1| 60S acidic ribosomal protein P0B [Hevea brasiliensis]
Length = 320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 10/194 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L + +++Y+ I + + N+ +++L+++R + DS GKN +M +
Sbjct: 9 DKKMAYDAKLCQLLDEYSQILIVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRTIRV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L+G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSEKTGNTAFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G ++P + L + T +NKG V + + KKGD + +A +L L
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 196 KMAKFKVLLYLWYN 209
+ + +++ Y+
Sbjct: 184 RPFSYGLVVLSAYD 197
>gi|383319851|ref|YP_005380692.1| 50S ribosomal protein L10 [Methanocella conradii HZ254]
gi|379321221|gb|AFD00174.1| LSU ribosomal protein L10P [Methanocella conradii HZ254]
Length = 305
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 4/172 (2%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQ 81
K++ E+V V + + V+ + L+ +R + + + +N + AL
Sbjct: 17 KKDAIKEIVDNVHSHKVTGIVDVRGVPADALQKMRQKLRGTVKMKMVRNTLTTIALESLP 76
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
+E + + S + GQ L++TN + + + + + AK G I+T DV + +GP
Sbjct: 77 AEEKAREL---SRYVDGQIVLVYTNANPFKLYKLLEATKTKAPAKGGDIATADVSVTKGP 133
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I +++Q G+ + G V + ++ V +KG+ +P+ A +L L
Sbjct: 134 TSFKPGPIVGEMQQAGIPAGIEGGKVVIKENKVVIRKGEKFSPKLAELLGRL 185
>gi|147815051|emb|CAN65663.1| hypothetical protein VITISV_014917 [Vitis vinifera]
Length = 379
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 2/185 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++K +L + +++Y+ I + +V NM + +L+D+ + S G N +M ++
Sbjct: 9 KKKVQYDQKLCRLLDEYSQILIVAVDNMGSKQLQDIHRALRGHSVVLMGNNTMMKRSVRL 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K + L G GL+FT V Y+ A+ G ++ DV ++
Sbjct: 69 HVEMTGNKAFLSLIPLLVGNIGLIFTKEDLKGVSDEVAKYKXGAPARXGVVAPIDVVIQP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + + L + T +NKG V + + KKGD + +A +L L KK
Sbjct: 129 GSTGLDP-AXTSFFQVLNIPTKINKGAVEIVVPVQLVKKGDKVGSSEAALLAKLGKKXFS 187
Query: 200 FKVLL 204
+ +++
Sbjct: 188 YGLVV 192
>gi|357492613|ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
Length = 323
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+KQ +L + ++++ I + + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKQAYDVKLCQLLDEFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNTMMKRSVRM 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGI 183
Query: 195 KKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 184 RPFSYGLVVLSVYDN 198
>gi|300175339|emb|CBK20650.2| unnamed protein product [Blastocystis hominis]
Length = 588
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++K +L + +E+YN IFV ++++ + ++ D+R + + FGK ++ + K
Sbjct: 5 QKKALYFQKLHQILEEYNKIFVVEIKHVTSKQVADIRKALRGQALLLFGKKTMIRRCMNK 64
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + + G GL+F N +V + A+ G ++ DV +
Sbjct: 65 FVEEHPGHPIEKLIPLVHGNVGLVFVNGDMANVREIILNNKVPAPARVGVVAHVDVIVPA 124
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
GP P + L + T +N+G + + D + G + P QA +L
Sbjct: 125 GPTGCDPGQTS-WFQALNIATKINRGQIEIINDVPLILAGQKVQPGQAALL 174
>gi|302804214|ref|XP_002983859.1| hypothetical protein SELMODRAFT_268802 [Selaginella moellendorffii]
gi|300148211|gb|EFJ14871.1| hypothetical protein SELMODRAFT_268802 [Selaginella moellendorffii]
Length = 322
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K+ ++V +E Y + + N+ +++L+ +R + +S GKN +M +
Sbjct: 9 EKKEIYDRKMVDLLENYTKALICAADNVGSTQLQQIRRGLRPESVVLMGKNTLMKRTIRT 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAERSGNTAVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKG+ + +A +L L +
Sbjct: 129 GSTGLDPSQTS-FFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIRPFS 187
Query: 200 FKVLLYLWYN 209
+ +++ + Y+
Sbjct: 188 YGLVVQMVYD 197
>gi|154339906|ref|XP_001565910.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063228|emb|CAM45430.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 323
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMA-----YA 76
K+ + LV + KY+ + + N+R+ ++ DVR + + F GK + A YA
Sbjct: 8 KREYEEHLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFVMGKKTLQAKIVEKYA 67
Query: 77 LGK---------SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS 127
K S++ E E N+ L G GL+FTN + ++ D + + A+
Sbjct: 68 QAKNASPGAKHFSEQCE-EHNL------LSGNTGLIFTNDNVQEIKAVLDSHRVKAPARV 120
Query: 128 GFISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLT 183
G I+ DV +P +EP + L + T + KG+V + + V GD +
Sbjct: 121 GAIAPCDV-----VVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSTGDKVD 175
Query: 184 PEQARILKLLKKKMAKFKV-LLYLW 207
A +L+ L ++V +L +W
Sbjct: 176 NSTATLLQKLNISPFYYQVDVLSVW 200
>gi|448382009|ref|ZP_21561844.1| acidic ribosomal protein P0 [Haloterrigena thermotolerans DSM
11522]
gi|445662243|gb|ELZ15013.1| acidic ribosomal protein P0 [Haloterrigena thermotolerans DSM
11522]
Length = 349
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIEK 87
EL + +E+Y+++ + + + + +L+D+R D + ++ +N + + AL + ++ +
Sbjct: 22 ELEEIIERYDSVGIVGIAGIPSKQLQDMRRDLYGTAQLRVSRNTLQSRALEDAGFGDLVE 81
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEGP 141
++ +GQ G++ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 82 HV-------EGQVGIVGTNENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEGD 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 129 TGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|402083570|gb|EJT78588.1| 60S acidic ribosomal protein P0 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 313
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ V N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFL 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFD---VYEDEDFAKSGFISTEDVE 136
D E E+ + V KG G +FTN DD+ + D A++G ++ +DV
Sbjct: 68 TDSPEYERLLPFV----KGNVGFVFTN---DDLKVIRDKILANRVRAPARAGAVAPDDVW 120
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ G +EP + LG+ T + +G + + D + + G + P +A +L +
Sbjct: 121 VPAG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNM 175
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + + + Y++ ++LD
Sbjct: 176 LNISPFTYGLTIQQVYDEGNAFPASVLD 203
>gi|433591630|ref|YP_007281126.1| ribosomal protein L10 [Natrinema pellirubrum DSM 15624]
gi|448333950|ref|ZP_21523138.1| acidic ribosomal protein P0 [Natrinema pellirubrum DSM 15624]
gi|433306410|gb|AGB32222.1| ribosomal protein L10 [Natrinema pellirubrum DSM 15624]
gi|445621524|gb|ELY74999.1| acidic ribosomal protein P0 [Natrinema pellirubrum DSM 15624]
Length = 349
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIEK 87
EL + +E+Y+++ + + + + +L+D+R D + ++ +N + + AL + ++ +
Sbjct: 22 ELEEIIERYDSVGIVGIAGIPSKQLQDMRRDLYGTAQLRVSRNTLQSRALEDAGFGDLVE 81
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEGP 141
++ +GQ G++ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 82 HV-------EGQVGIVGTNENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEGD 128
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 129 TGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|424813670|ref|ZP_18238858.1| ribosomal protein L10 [Candidatus Nanosalina sp. J07AB43]
gi|339758616|gb|EGQ43871.1| ribosomal protein L10 [Candidatus Nanosalina sp. J07AB43]
Length = 320
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K+ +E +A++++ I + +Q++ +L+++ + ++ + + +M AL
Sbjct: 12 EQKEAKVEEFEQAIQEHKVIGILDMQSLPARQLQEIEREIEEFADIKMSRKTLMNIAL-- 69
Query: 80 SQEDEIEK-NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDED---FAKSGFISTEDV 135
D IE+ + + + Q +F+ + D + + +D A G I+ D+
Sbjct: 70 ---DNIEREGLEELDTDEAMQPAFIFSTK---DPFQLYSLIQDNQTSAAADGGEIAPNDI 123
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
E+ EG P + +L+Q G Q ++ G + + + T+ + GD +T + A IL L
Sbjct: 124 EVPEGDTGIGPGPMLGKLQQTGAQVQVDDGSIHVMQPATMVEAGDEITSDDAEILNQLGI 183
Query: 196 KMAKFKVLLYLWYNKKE 212
+ + + L + YN E
Sbjct: 184 EPLQIGLDLVIAYNDGE 200
>gi|269860044|ref|XP_002649745.1| LSU ribosomal protein L10P [Enterocytozoon bieneusi H348]
gi|220066804|gb|EED44275.1| LSU ribosomal protein L10P [Enterocytozoon bieneusi H348]
Length = 259
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK-SQEDEIEKNI 89
K Y+ ++ +++++ K+++N++ +D +F F KNK+M AL K + + K +
Sbjct: 18 KMFSTYDKFMFMNLHKVQSTQFKNIKNEFPEDVKFLFAKNKIMKKALEKINNNGKFNKAL 77
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMW--FDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
V KG + F N S+ +++ + FAK G + EDV + EGP P
Sbjct: 78 DFV----KGNIIVAFFNNSESANIVYNVCQKFRCNAFAKFGDKALEDVIVPEGPTGLGPD 133
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
I+ + T + KG + + H + G+V+ +A IL L K F
Sbjct: 134 QIQ-LFHAAKINTKIVKGKIEIAVSHKLISAGEVVGISEANILAKLGIKPFNF 185
>gi|301095349|ref|XP_002896775.1| 60S acidic ribosomal protein P0 [Phytophthora infestans T30-4]
gi|262108658|gb|EEY66710.1| 60S acidic ribosomal protein P0 [Phytophthora infestans T30-4]
Length = 318
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 8/193 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERK D+L +E Y IF+ V N+ +++++ +R + + GKN +M
Sbjct: 6 ERKLEYFDKLESLLENYTKIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFNN 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+ + + LKG G +FTN DD+ +V E A+ G I+ DV
Sbjct: 66 FVKKNPGHPLELFIPLLKGNVGFVFTN---DDLSEIREVLESNRVPAPARVGSIAPVDVI 122
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P + L + T + KG + + + + +KG+ + +A +L+ L K
Sbjct: 123 VPPGPTGADPGQTS-FFQALQIATKIQKGQIEIVTEVMLTRKGEKVGNSEAALLQKLDIK 181
Query: 197 MAKFKVLLYLWYN 209
+ +++ Y+
Sbjct: 182 PFSYGLVIEQVYD 194
>gi|41614888|ref|NP_963386.1| acidic ribosomal protein P0 [Nanoarchaeum equitans Kin4-M]
gi|40068612|gb|AAR38947.1| NEQ091 [Nanoarchaeum equitans Kin4-M]
Length = 284
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 33/202 (16%)
Query: 43 FSVQNMRNSKLKDVRNDWKDSR----FFFGKNKVMAYALGKSQ----EDEIEKNIHVVSS 94
++ N+R +D++ K+ R K +++ AL ++ +E+EK V +
Sbjct: 23 VAIANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANELEKEKEV--T 80
Query: 95 ALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP--LPEFPHSIEPQ 152
AL LL TN + + F ++ K+G I+ +D+ + +G +P P I+ +
Sbjct: 81 AL-----LLSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGP--IQTE 133
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLY-----LW 207
LR LG++T + G + + +D V K+G++++P+ A +L+ L K + +V L ++
Sbjct: 134 LRALGVKTKVTSGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKPIERQVTLIAAKDEVF 193
Query: 208 YNKKEGTFENLLDREKTPMDIY 229
Y+K+ +L+ TP+D+Y
Sbjct: 194 YDKQ------ILN---TPLDLY 206
>gi|313586449|gb|ADR71235.1| 60S acidic ribosomal protein P0A [Hevea brasiliensis]
Length = 320
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M + E
Sbjct: 17 KLCQLLDEYSQILIVAADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRTIRVHSEKTGNT 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L+G GL+FT +V Y+ A+ G ++ DV + G
Sbjct: 77 AFLNLIPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGN-----T 131
Query: 148 SIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVL 203
++P + L + T +NKG V + + KKGD + +A +L L + + ++
Sbjct: 132 GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLV 191
Query: 204 LYLWYN 209
+ Y+
Sbjct: 192 VLSAYD 197
>gi|161527889|ref|YP_001581715.1| acidic ribosomal protein P0 [Nitrosopumilus maritimus SCM1]
gi|160339190|gb|ABX12277.1| ribosomal protein L10 [Nitrosopumilus maritimus SCM1]
Length = 288
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKS 80
RK + +L + +KY + + + +R++++ +R KD FF K+KV AL S
Sbjct: 11 RKTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALENS 70
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
++ I KGQ ++FTN S + + + A+ G I++ DV +
Sbjct: 71 DIPGMKDMI----GEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAK 126
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P + + ++ G+ T +++G + + KD T KG+ + + A IL L K +
Sbjct: 127 NTGIAPGPMLTEFKEAGIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEA 186
Query: 201 KVLLY 205
+ L+
Sbjct: 187 GITLF 191
>gi|448305331|ref|ZP_21495263.1| acidic ribosomal protein P0 [Natronorubrum sulfidifaciens JCM
14089]
gi|445589178|gb|ELY43414.1| acidic ribosomal protein P0 [Natronorubrum sulfidifaciens JCM
14089]
Length = 346
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
DEL+ ++ Y ++ + + + + +L+D+R D + +N + +L ++ D++
Sbjct: 21 DELISLIDNYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRSLEETGLDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+I +GQ GL+ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 THI-------EGQVGLIATDDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + +G + + +D TV + G+ ++ + + +L L +
Sbjct: 128 DTGVDPGPFVGELQSIGANARIEEGSIQVMEDSTVLEAGEEVSADLSNVLSEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EG L D E +DI E D
Sbjct: 186 EVGLDLKAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|302754772|ref|XP_002960810.1| hypothetical protein SELMODRAFT_437282 [Selaginella moellendorffii]
gi|300171749|gb|EFJ38349.1| hypothetical protein SELMODRAFT_437282 [Selaginella moellendorffii]
Length = 321
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K+ ++V +E Y + + N+ +++L+ +R + +S GKN +M +
Sbjct: 9 EKKEIYDRKMVDLLENYTKALICAADNVGSTQLQQIRRGLRPESVVLMGKNTLMKRTIRT 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAERSGNMAVLSLMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPIDVTIPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKG+ + +A +L L +
Sbjct: 129 GSTGLDPSQTS-FFQVLNIPTKINKGTVEIVSSVELIKKGEKVGSSEAALLAKLGIRPFS 187
Query: 200 FKVLLYLWYN 209
+ +++ + Y+
Sbjct: 188 YGLVVQMVYD 197
>gi|448489195|ref|ZP_21607569.1| acidic ribosomal protein P0 [Halorubrum californiensis DSM 19288]
gi|445695140|gb|ELZ47251.1| acidic ribosomal protein P0 [Halorubrum californiensis DSM 19288]
Length = 348
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 76/163 (46%), Gaps = 6/163 (3%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
ELV+ ++ Y +I + V + + +L+ +R + S +N + AL DE++
Sbjct: 20 ELVEFIDSYQSIGIVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLTNRAL-----DEVDD 74
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ ++ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 75 GVEALTEYVSGQVALVGTNDNPFGLFKQLEASKTPAPINAGEVTPNDIVIPEGDTGVDPG 134
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+L+ +G + G + + +D TV ++G+V+ + A +L
Sbjct: 135 PFVGELQTVGASARIMDGSIKVTEDSTVLEEGEVVDDDLANVL 177
>gi|435846982|ref|YP_007309232.1| ribosomal protein L10 [Natronococcus occultus SP4]
gi|433673250|gb|AGB37442.1| ribosomal protein L10 [Natronococcus occultus SP4]
Length = 347
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
DEL + +E Y ++ + + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELAELIESYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEDAGLGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
+++ +GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHV-------EGQVGLVGTNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + G + + +D TV + G+ ++ + + +L L +
Sbjct: 128 DTGVDPGPFVGELQSVGANARIEDGSIQVMEDSTVLEAGEEVSADLSNVLNEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EGT L D E +D+ E D
Sbjct: 186 EVGLDLRAVVAEGT---LFDPEDLDIDVDAYESD 216
>gi|51847757|gb|AAU10516.1| 60S ribosomal protein, partial [Leishmania donovani]
Length = 315
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQE---- 82
+ LV + KY+ + + N+R+ ++ DVR + + F GK + A + K +
Sbjct: 5 ERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFIMGKKTLQAKIVEKRAQAKDA 64
Query: 83 --------DEI-EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTE 133
D+ E N+ L G GL+FTN + ++ D + + A+ G IS
Sbjct: 65 SPEAKRFNDQCGEYNL------LSGNTGLIFTNNAVQEITSVLDAHRVKAPARVGAISPC 118
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
DV +P +EP + L + T + KG+V + + V GD + A +
Sbjct: 119 DV-----VVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATL 173
Query: 190 LKLLKKKMAKFKV-LLYLW 207
L+ L ++V +L +W
Sbjct: 174 LQKLNISPFYYQVNVLSVW 192
>gi|303288816|ref|XP_003063696.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454764|gb|EEH52069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 315
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALG 78
L+ KQ D L K ++ ++ F+ N+ + + D+R + S GKN +M +
Sbjct: 7 LKVKQAYNDRLCKLLDDHDRAFLVHADNVGSRQFMDIRAALRPVSHILMGKNTMMRKCIR 66
Query: 79 KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
+ E + + + + ++ L G G++FT +V + AK I+ +V +
Sbjct: 67 EYCERKGDDSWNTLADKLIGNVGIIFTTGDMAEVRKTIAEFVVPAPAKVNAIAPCEVVIP 126
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G P +EP + L + T +NKG + + D + G+ +T A +L
Sbjct: 127 AG-----PTGMEPSQTGFFQVLNIATKINKGAIEILSDFKCVEAGEKVTSSAATLL 177
>gi|358248740|ref|NP_001239676.1| uncharacterized protein LOC100777482 [Glycine max]
gi|255641162|gb|ACU20858.1| unknown [Glycine max]
Length = 319
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +E+Y I V + N+ +++L+++R + DS GKN +M ++ +
Sbjct: 9 EKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSV-R 67
Query: 80 SQEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
++ N ++ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 68 MHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 127
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKM 197
G P + L + T +NKG V + + KKGD V + E A + KL +
Sbjct: 128 PGNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPF 186
Query: 198 AKFKVLLYLWYN 209
+ V+L ++ N
Sbjct: 187 SYGLVVLSVYDN 198
>gi|448339751|ref|ZP_21528761.1| acidic ribosomal protein P0 [Natrinema pallidum DSM 3751]
gi|445618917|gb|ELY72468.1| acidic ribosomal protein P0 [Natrinema pallidum DSM 3751]
Length = 345
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DEL + +++Y ++ V + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELARIIDEYESVGVVGIAGIPSKQLQDMRRDLHGTAVLRVSRNTLQTRALEDAGFGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I GQ G++ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHIG-------GQVGIIATDENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + +G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEEGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|15225613|ref|NP_181530.1| 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana]
gi|12229886|sp|O04204.1|RLA01_ARATH RecName: Full=60S acidic ribosomal protein P0-1
gi|2088654|gb|AAB95286.1| 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|25054858|gb|AAN71918.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|330254669|gb|AEC09763.1| 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana]
Length = 317
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + + +Y+ I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 9 EKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ + + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 69 HADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G ++P + L + T +NKG V + + KKGD + +A +L
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL 178
>gi|388501388|gb|AFK38760.1| unknown [Lotus japonicus]
Length = 322
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + ++ Y I V + N+ +++L+++R + DS GKN +M + +
Sbjct: 8 EKKIAYDAKLCQLLDDYTQILVVNADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTV-R 66
Query: 80 SQEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
++ N+++ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 67 IHAEKSGNNVYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 126
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLL 193
G ++P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 127 PGN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLG 181
Query: 194 KKKMAKFKVLLYLWYN 209
+ + V+L ++ N
Sbjct: 182 IRPFSYGLVVLSVYDN 197
>gi|408382759|ref|ZP_11180301.1| acidic ribosomal protein P0 [Methanobacterium formicicum DSM 3637]
gi|407814561|gb|EKF85186.1| acidic ribosomal protein P0 [Methanobacterium formicicum DSM 3637]
Length = 334
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEK 87
EL +E + + + + ++ +L+ +R + S + + +M AL S++
Sbjct: 14 ELKDLIESHTVVGMADLSDIPAPQLQKMRQSLRGSAKLKMSRKTLMDLALNDSKK----S 69
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLPE 144
N+ V+ + GQ L+FT+ + + + ED A++G + D+ + +G
Sbjct: 70 NVKVLVDHMDGQPALIFTDMNP---FKLYKILEDSKTPAPARAGSTAIADIVVPKGDTGF 126
Query: 145 FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I +L+++G+ + KG + + +D T+ +GDV++ + A +L L
Sbjct: 127 MPGPILGELQKIGIPAKIEKGKIVVTEDKTIVAEGDVISRDVAGMLTRL 175
>gi|297827621|ref|XP_002881693.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
gi|297327532|gb|EFH57952.1| 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]
Length = 317
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + + +Y I V + N+ +++L+++R + DS GKN +M ++
Sbjct: 9 EKKIVYDSKLCQLLNEYPQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRL 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ K + L+G GL+FT +V Y+ A+ G ++ DV ++
Sbjct: 69 HADKTGNKAFLNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G ++P + L + T +NKG V + + KKGD + +A +L
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL 178
>gi|68075471|ref|XP_679654.1| ribosomal phosphoprotein P0 [Plasmodium berghei strain ANKA]
gi|56500453|emb|CAH95889.1| ribosomal phosphoprotein P0, putative [Plasmodium berghei]
Length = 314
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++YN I + V N+ + ++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYNKILIVHVDNVGSDQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS--GFISTEDV 135
+ + +IEK + +V K G +F KDD+ ++ +++ A + G I+ DV
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFC---KDDLSEVRNILQNKSPAPARLGVIAPIDV 120
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ GP P S + LG+ T + KG + + ++ + K+G+ ++ A +L+
Sbjct: 121 FIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVSASSATLLQ 175
>gi|448328430|ref|ZP_21517741.1| acidic ribosomal protein P0 [Natrinema versiforme JCM 10478]
gi|445615611|gb|ELY69252.1| acidic ribosomal protein P0 [Natrinema versiforme JCM 10478]
Length = 349
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DEL + ++ Y ++ V + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELGQIIDDYESVGVVGIAGIPSKQLQDMRRDLHGTAVLRVSRNTLQTRALEDAGFGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I GQ G++ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHI-------GGQVGIIATNENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + +G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEEGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|158605327|dbj|BAF91358.1| ribosomal phosphoprotein P0 [Babesia equi]
gi|429328546|gb|AFZ80306.1| 60S acidic ribosomal protein P0, putative [Babesia equi]
Length = 313
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K+ D+L V+ Y I + SV ++ + ++ VR+ + + GKN ++ AL K
Sbjct: 8 EKKKLYFDKLTHLVKTYPKILIVSVDHVGSKQMATVRHSLRGLATILMGKNTMIRTALHK 67
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSK---DDVLMWFDVYEDEDFAKSGFISTED 134
+ ED EIEK ++ +K G +F DV++ V A+ G I+ D
Sbjct: 68 NFEDSPEIEK----IAQCMKLNTGFVFCEADPLEVRDVILQNKVPAP---ARQGVIAPSD 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
V ++ G P S + LG+ T + KG + + + + KK D +T A +L+ L
Sbjct: 121 VFIQAGSTGLDP-SQTSFFQALGISTKIVKGQIEIQNEVHLIKKDDKVTASGATLLQKLN 179
Query: 195 KK 196
K
Sbjct: 180 IK 181
>gi|70944013|ref|XP_741984.1| ribosomal phosphoprotein P0 [Plasmodium chabaudi chabaudi]
gi|56520708|emb|CAH80782.1| ribosomal phosphoprotein P0, putative [Plasmodium chabaudi
chabaudi]
Length = 212
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++YN I + V N+ + ++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYNKILIVHVDNVGSDQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + +IEK + +V K G +F +V + A+ G I+ DV +
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFCKDDLSEVRSIILQNKSPAPARLGVIAPIDVFI 123
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
GP P S + LG+ T + KG + + ++ + K+G+ +T A +L+
Sbjct: 124 PPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVTASSATLLQ 176
>gi|224013108|ref|XP_002295206.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969168|gb|EED87510.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 323
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 83/191 (43%), Gaps = 2/191 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERKQ + + + Y+ F+ + N+ + +++ R + + GKN +M + +
Sbjct: 6 ERKQQYFSTMKELMTTYSKCFIVEIDNVGSMQIQQTRLALRGKAEVLMGKNTMMRKCIRE 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ + I + + +G G +FTN V + A+ G ++ DV + +
Sbjct: 66 FVEENPDTPIAQLEACCRGNVGFVFTNGDLGAVREVLESNVRPAPARVGAVAPIDVIVPK 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
GP P + L + T + KG + + D + G+ +T QA +L+ L +
Sbjct: 126 GPTGCDPGQTA-FFQTLQIATKITKGQIEMTTDTHLISAGERVTASQAALLQKLAMEPFT 184
Query: 200 FKVLLYLWYNK 210
+ ++L Y+
Sbjct: 185 YGLVLKSVYDS 195
>gi|91773886|ref|YP_566578.1| acidic ribosomal protein P0 [Methanococcoides burtonii DSM 6242]
gi|121691618|sp|Q12UP8.1|RLA0_METBU RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|91712901|gb|ABE52828.1| LSU ribosomal protein L10E [Methanococcoides burtonii DSM 6242]
Length = 337
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEK 87
+E+ +E Y V ++ + +L+ +R D KD F KV +L + D+
Sbjct: 19 EEIKSLIESYPLFGVIGIEGIPAKQLQSMRRDLKD----FAVLKVCRNSLTRRALDQSSD 74
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
++ + + Q L+FT ++ + + + K+G ++T D+ +++GP P
Sbjct: 75 DVKKMDDYIDVQTALIFTKQNPFKLYKLLEKSKTPSPIKAGMVATSDIIVEKGPTSFPPG 134
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
I ++ G+ ++ G V + + V K G+V++ + A +L L+
Sbjct: 135 PILGDMQGAGIPAAIDGGKVVIKETKAVAKAGEVVSQKLAAMLTRLE 181
>gi|82596058|ref|XP_726106.1| ribosomal protein L10 [Plasmodium yoelii yoelii 17XNL]
gi|23481371|gb|EAA17671.1| Ribosomal protein L10, putative [Plasmodium yoelii yoelii]
Length = 315
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++YN I + V N+ + ++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYNKILIVHVDNVGSDQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + +IEK + +V K G +F +V + A+ G I+ DV +
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFCKDDLSEVRSIILQNKSPAPARLGVIAPIDVFI 123
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
GP P S + LG+ T + KG + + ++ + K+G+ +T A +L+ K
Sbjct: 124 PPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVTASSATLLQKFNMKP 182
Query: 198 AKFKVLLYLWYNKKEGTFENLLD 220
+ V + Y+ N+LD
Sbjct: 183 FSYGVDVRTVYDDGVIYDANVLD 205
>gi|19075893|ref|NP_588393.1| 60S acidic ribosomal protein P0 [Schizosaccharomyces pombe 972h-]
gi|41688607|sp|O74864.1|RLA0_SCHPO RecName: Full=60S acidic ribosomal protein P0
gi|3766376|emb|CAA21428.1| 60S acidic ribosomal protein Rpp0 (predicted) [Schizosaccharomyces
pombe]
Length = 312
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K ++L EKYN++FV ++ N+ + ++ VR + + GKN ++ A+
Sbjct: 6 ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D E+E+ + VV +G G +FTN +V A+ I+ DV +
Sbjct: 66 IINDMPELERLLPVV----RGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKD-HTVCKKGDVLTPEQARILKL 192
G +EP + LG+ T + +G + + D H V K V P +A +L +
Sbjct: 122 PAG-----NTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKV-GPSEATLLNM 175
Query: 193 L 193
L
Sbjct: 176 L 176
>gi|170290960|ref|YP_001737776.1| acidic ribosomal protein P0 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175040|gb|ACB08093.1| ribosomal protein L10 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 288
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKS 80
RK+ ++ +K +++Y + + + + + VR + D +FF K + A S
Sbjct: 14 RKEEAINKFLKLLKEYPTVMIGDFSRIPANHFERVRRELSPDVKFFVMKKTLFKKACELS 73
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+ ++K +V +L ++F+ + D + E F K G ++ EDV + G
Sbjct: 74 NREGLKKLSEMVPQSLV----VIFSRKDPFDTYKLLSERKTEIFMKPGDVAEEDVVIPAG 129
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK- 199
P P I LR + + T + G V + + T+ KKG + + A +L+ L K K
Sbjct: 130 PTDLAPGPILMDLRAMNIPTKIQGGKVAIAESVTILKKGQKASAQIADLLRALNIKPLKV 189
Query: 200 -FKV 202
FKV
Sbjct: 190 GFKV 193
>gi|448343595|ref|ZP_21532519.1| acidic ribosomal protein P0 [Natrinema gari JCM 14663]
gi|445622939|gb|ELY76380.1| acidic ribosomal protein P0 [Natrinema gari JCM 14663]
Length = 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DEL + +++Y ++ V + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELARIIDEYESVGVVGIAGIPSKQLQDMRRDLHGTAVLRVSRNTLQTRALEDAGFGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I GQ G++ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHIG-------GQVGIIATDENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|397774805|ref|YP_006542351.1| ribosomal protein L10 [Natrinema sp. J7-2]
gi|397683898|gb|AFO58275.1| ribosomal protein L10 [Natrinema sp. J7-2]
Length = 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DEL + +++Y ++ V + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELARIIDEYESVGVVGIAGIPSKQLQDMRRDLHGTAVLRVSRNTLQTRALEDAGFGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I GQ G++ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHIG-------GQVGIIATDENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|327400830|ref|YP_004341669.1| acidic ribosomal protein P0-like protein [Archaeoglobus veneficus
SNP6]
gi|327316338|gb|AEA46954.1| Acidic ribosomal protein P0-like protein [Archaeoglobus veneficus
SNP6]
Length = 336
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 31 VKAVEKYNNIF-------VFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQE 82
V+AVE+ +F + S + + +++D+R +++D + + KN ++ AL +S
Sbjct: 13 VQAVEEVKRLFTGYPVVALVSFRGVTARQMQDIRRNFRDFAVIWVTKNTLIEKAL-RSLG 71
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
+ EK V L Q ++ T + + + + K G +S DV +++GP
Sbjct: 72 GDYEK----VLDYLGDQIAIVATQLNPFKLYKKLEETKVPSPLKPGQVSPVDVVVEKGPT 127
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P + L+ G+ + KG + + + TV K G+V+ PE AR L+LL+ K K
Sbjct: 128 SFPPGPVIGDLQAGGIPAAIEKGKIVIEETVTVVKAGEVVKPEVARALELLEVKPVKL 185
>gi|296242678|ref|YP_003650165.1| 50S ribosomal protein L10 [Thermosphaera aggregans DSM 11486]
gi|296095262|gb|ADG91213.1| LSU ribosomal protein L10P [Thermosphaera aggregans DSM 11486]
Length = 332
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGKSQED-EI 85
++LV+ ++KY + + + S ++ +R K + K K+ A AL + D E
Sbjct: 17 EDLVELLKKYKVFLIGDLTGVPASHVQRLRKKLAKTAEVRVVKPKLFAIALERVGIDPEA 76
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
K++ L GQ + FTN + DV + D+ K G + +++ + EG
Sbjct: 77 FKDL------LTGQNIVFFTNENPFDVALKIHNIVTMDYYKPGEKTDKEIVIPEGNTGIP 130
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLY 205
P + +L +QT + V+ + KD V K GDV++PE + IL+ L + + ++ L
Sbjct: 131 PGPMLSVFGKLKIQTKVQANVIHVAKDTVVAKPGDVISPELSSILQKLGLALKEIRLRLK 190
Query: 206 LWYN 209
Y+
Sbjct: 191 AGYD 194
>gi|145518311|ref|XP_001445033.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412466|emb|CAK77636.1| unnamed protein product [Paramecium tetraurelia]
Length = 278
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDW--KDSRFFFGKNKVMAYALGKSQED-----EIE 86
+ KY + + + N+ + +++D+R K++ GKN + L ++ E
Sbjct: 22 LSKYTQVIIVGLANVGSKQVQDIRRILAKKNALLVIGKNTLFKKVLATRVQELPDTHEYF 81
Query: 87 KNIHVVSSALK----------GQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
+++ +A+K G+ G +FT+ D+ + + E A+ G I+ DV
Sbjct: 82 EDLRKFGNAIKELDSLKNQVAGKVGFVFTDTPVFDLKPIIEENKVETPARVGAIAPIDVV 141
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP P SI+ L + T + KG + + KD V K G + QA +L+ L KK
Sbjct: 142 IPPGPTGMDPASIQ-FFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKK 200
>gi|307594167|ref|YP_003900484.1| 50S ribosomal protein L10 [Vulcanisaeta distributa DSM 14429]
gi|307549368|gb|ADN49433.1| ribosomal protein L10 [Vulcanisaeta distributa DSM 14429]
Length = 353
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW---KDSRFFFGKNKVMAYAL 77
E+K + +EL + KY N+FV + N L++ R W + +R KN ++ AL
Sbjct: 19 EKKVRIVNELKELFSKYENVFVIDIHETSNRVLQEYRF-WLRRRGARVIKAKNTLVLIAL 77
Query: 78 ----GKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTE 133
G ED IEK G+ L+F+N + ++ W A G I+
Sbjct: 78 RQLMGNVSED-IEK-------LFTGENLLIFSNENPFELAKWIWGTGVRREAMPGDIAPF 129
Query: 134 DVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
D+ G P I + +L + + G + + KD V KKGD + + A ILK L
Sbjct: 130 DLVAPAGNTNMSPGPIMSKFGKLKIPIKVQDGKIWIVKDTVVVKKGDKINEDAAEILKKL 189
Query: 194 KKK 196
K
Sbjct: 190 NIK 192
>gi|192910684|gb|ACF06450.1| ribosomal protein L10 [Elaeis guineensis]
Length = 321
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 7/201 (3%)
Query: 10 VTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFG 68
V LSK+ E+K +L + +++Y+ + + + N+ +++L+++R + DS G
Sbjct: 3 VKLSKS-----EKKIEYDKKLCRLLDEYSQVLIAAADNVGSNQLQNIRKGLRGDSVVLMG 57
Query: 69 KNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSG 128
KN ++ + E K+ + L G GL+FT +V Y+ A+ G
Sbjct: 58 KNTLIRRCIKIHAEKTGNKDYLNLLPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVG 117
Query: 129 FISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
++ DV + G P + L + T +NKG V + + +KGD + +A
Sbjct: 118 LVAPIDVVVPPGNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAA 176
Query: 189 ILKLLKKKMAKFKVLLYLWYN 209
+L L + + +++ Y+
Sbjct: 177 LLAKLGIRPFSYGLVIQAVYD 197
>gi|313018|emb|CAA41724.1| ribosomal protein L10e [Haloferax volcanii]
Length = 350
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N ++ AL DE+
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVN 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + +D V +G+ ++ E A +L L
Sbjct: 136 GPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAEL 182
>gi|448345290|ref|ZP_21534187.1| acidic ribosomal protein P0 [Natrinema altunense JCM 12890]
gi|445635288|gb|ELY88458.1| acidic ribosomal protein P0 [Natrinema altunense JCM 12890]
Length = 346
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DEL + +++Y ++ V + + + +L+D+R D + +N + AL + ++
Sbjct: 21 DELARIIDEYESVGVVGIAGIPSKQLQDMRRDLHGTAVLRVSRNTLQTRALEDAGFGDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++I GQ G++ T+ + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 EHIG-------GQVGIIATDENP------FSLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|292656874|ref|YP_003536771.1| 50S ribosomal protein L10 [Haloferax volcanii DS2]
gi|448290875|ref|ZP_21482020.1| acidic ribosomal protein P0 [Haloferax volcanii DS2]
gi|347595691|sp|P41198.2|RLA0_HALVD RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|291370202|gb|ADE02429.1| ribosomal protein L10 [Haloferax volcanii DS2]
gi|445577928|gb|ELY32348.1| acidic ribosomal protein P0 [Haloferax volcanii DS2]
Length = 348
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N ++ AL DE+
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVN 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + +D V +G+ ++ E A +L L
Sbjct: 136 GPFVGELQQVGASARIMDGSIMVTEDSNVLSEGEEVSEELANVLAEL 182
>gi|433638380|ref|YP_007284140.1| ribosomal protein L10 [Halovivax ruber XH-70]
gi|433290184|gb|AGB16007.1| ribosomal protein L10 [Halovivax ruber XH-70]
Length = 346
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DE+ +E + N+ V + + + +L+D+R + + +N + AL + D++
Sbjct: 21 DEIEALIEGHENVGVVGIAGIPSKQLQDMRRELHGTAVLRVSRNTLQRRALEATGSDDLT 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + +GQ GL+ ++ + F +Y + + +K +G ++ D+ + EG
Sbjct: 81 EFV-------EGQVGLVLSDENP------FSLYRELEASKTPAPIGAGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+Q+G + G + + +D TV + G+ +T + +L L + +
Sbjct: 128 DTGVDPGPFVGELQQIGANARIEDGSIQVMEDSTVLEAGEEVTADIENVLNELGIEAKEV 187
Query: 201 KVLLYLWY 208
+ L Y
Sbjct: 188 GLDLRAAY 195
>gi|351725493|ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max]
gi|1710587|sp|P50346.1|RLA0_SOYBN RecName: Full=60S acidic ribosomal protein P0
gi|1196897|gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
Length = 320
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +E+Y I V + N+ +++L+++R + DS GKN +M ++ +
Sbjct: 9 EKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSV-R 67
Query: 80 SQEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
++ N ++ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 68 MHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 127
Query: 139 EGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKM 197
G P + L + T +NKG V + + +KGD V + E A + KL +
Sbjct: 128 PGNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPF 186
Query: 198 AKFKVLLYLWYN 209
+ V+L ++ N
Sbjct: 187 SYGLVVLSVYDN 198
>gi|352682979|ref|YP_004893503.1| 50S ribosomal protein L10e [Thermoproteus tenax Kra 1]
gi|350275778|emb|CCC82425.1| 50S ribosomal protein L10e [Thermoproteus tenax Kra 1]
Length = 346
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQ 81
K + EL + V+ YN IF+F + + + L + R + K+ +M AL +
Sbjct: 22 KTRILSELEELVKHYNYIFLFDLHELSSRILHEYRYRLRGRAVIKVAKHNLMRLAL-RRV 80
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+ V L G+ +FTN + + + A+ G ++ D+ GP
Sbjct: 81 YGEVPPE---VDKELFGERAYIFTNENPALFVRIVEANAVRRKARGGDVAPYDIIAPAGP 137
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL--KKKMAK 199
P I + +L + T + +G + + KD V K G +T E A IL++L + K
Sbjct: 138 TNLSPGPILSKFGKLKIPTRVQEGKIWIAKDSPVVKAGQQITDEIADILRVLGVEPIYEK 197
Query: 200 FKVLLYLWYNKKEGTFENL 218
++L +W + + E +
Sbjct: 198 LRLLGIIWRGSRFVSIEEV 216
>gi|340344245|ref|ZP_08667377.1| Ribosomal protein L10 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519386|gb|EGP93109.1| Ribosomal protein L10 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 274
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 26 LRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDE 84
+ ++++ +KY + + +R S+L +R K F K+++ AL KS
Sbjct: 1 MYQQMMEIPKKYKVVALVKTNKVRASQLLPLRKALKGQVEFVCVKDRIAQKALEKSNIPG 60
Query: 85 IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPE 144
I+ ++ L GQC +FTN S + + + A+ G I++ D+ +
Sbjct: 61 IKG----IADELVGQCLFIFTNMSPFKLNVLLAKNKIMMAARGGDIASVDIVVPAKNTGI 116
Query: 145 FPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
P + + ++ G+ T +++G + + KD T KKG V+ + A +L L K + + L
Sbjct: 117 APGPMLTEFKEAGIPTKIDQGTIWIAKDSTPVKKGGVINEKLAVLLGKLDIKPVEAGISL 176
Query: 205 Y 205
Y
Sbjct: 177 Y 177
>gi|448358402|ref|ZP_21547084.1| acidic ribosomal protein P0 [Natrialba chahannaoensis JCM 10990]
gi|445646035|gb|ELY99027.1| acidic ribosomal protein P0 [Natrialba chahannaoensis JCM 10990]
Length = 345
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 25/219 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ D+L +E Y ++ + + + + +L+D+R D + +N + AL +
Sbjct: 16 KQEEVDDLEALIESYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALEAAG 75
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDV 135
++ I +GQ GL+ TN + F +Y++ + +K+ G ++ D+
Sbjct: 76 LGDLVDEI-------EGQVGLIGTNDNP------FALYKELEASKTPAPINEGEVAPNDI 122
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+ EG P +L+ +G + G + + +D TV G+ ++ + A +L L
Sbjct: 123 VIPEGDTGVDPGPFVGELQSIGANARIEDGSIQVMEDSTVLSAGEEVSADLANVLNEL-- 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+ +V L L EG L D E +DI E D
Sbjct: 181 GIEPKEVGLDLRAVVAEGV---LFDPEDLDIDIGAYESD 216
>gi|448374032|ref|ZP_21557917.1| acidic ribosomal protein P0 [Halovivax asiaticus JCM 14624]
gi|445660709|gb|ELZ13504.1| acidic ribosomal protein P0 [Halovivax asiaticus JCM 14624]
Length = 347
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DE+ +E + N+ V + + + +L+D+R + + +N + AL + D++
Sbjct: 21 DEIEALIENHENVGVVGIAGIPSKQLQDMRRELHGTAVLRVSRNTLQRRALEATGSDDLT 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + +GQ GL+ ++ + F +Y + + +K +G ++ D+ + EG
Sbjct: 81 EFV-------EGQVGLVLSDENP------FSLYRELEASKTPAPIGAGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+Q+G + G + + +D TV + G+ +T + +L L + +
Sbjct: 128 DTGVDPGPFVGELQQIGANARIEDGSIQVMEDSTVLEAGEEVTADIENVLNELGIEAKEV 187
Query: 201 KVLLYLWY 208
+ L Y
Sbjct: 188 GLDLRAAY 195
>gi|448546336|ref|ZP_21626500.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-646]
gi|448548323|ref|ZP_21627590.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-645]
gi|448557517|ref|ZP_21632706.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-644]
gi|445702789|gb|ELZ54729.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-646]
gi|445714074|gb|ELZ65841.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-644]
gi|445714418|gb|ELZ66180.1| acidic ribosomal protein P0 [Haloferax sp. ATCC BAA-645]
Length = 348
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N ++ AL DE+
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVN 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + +D V +G+ ++ E A +L L
Sbjct: 136 GPFVGELQQVGASARIMDGSIKVTEDSNVLSEGEEVSEELANVLAEL 182
>gi|448565331|ref|ZP_21636198.1| acidic ribosomal protein P0 [Haloferax prahovense DSM 18310]
gi|445715075|gb|ELZ66831.1| acidic ribosomal protein P0 [Haloferax prahovense DSM 18310]
Length = 346
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N ++ AL DE++
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLVNRAL-----DEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGFEDLKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + +D V +G+ ++ E A +L L
Sbjct: 136 GPFVGELQQVGASARIMDGSIKVTEDSNVLSEGEEVSEELANVLAEL 182
>gi|730578|sp|P39096.1|RLA0_LEICH RecName: Full=60S acidic ribosomal protein P0
gi|459866|gb|AAA29263.1| ribosomal protein P0 [Leishmania chagasi]
Length = 322
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + LV + KY+ + + N+R+ ++ DVR + + F GK + A + K
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRA 67
Query: 82 E------------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
+ D+ E+ + L G GL+FTN + ++ D + + A+ G
Sbjct: 68 QAKDASPEAKPFNDQCEE-----YNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGA 122
Query: 130 ISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
I + V +P +EP + L + T + KG+V + + V GD +
Sbjct: 123 IPCDVV------VPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNS 176
Query: 186 QARILKLLKKKMAKFKV-LLYLW 207
A +L+ L ++V +L +W
Sbjct: 177 TATLLQKLNISPFYYQVNVLSVW 199
>gi|284162830|ref|YP_003401453.1| 50S ribosomal protein L10 [Archaeoglobus profundus DSM 5631]
gi|284012827|gb|ADB58780.1| ribosomal protein L10 [Archaeoglobus profundus DSM 5631]
Length = 336
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEK 87
+EL K + + + + S + + +++++ +R + + KV+ L + +E+E
Sbjct: 17 EELRKMFKSHPVVAIVSFRGVPSNQMQRIRRELRGKALI----KVVKNTLVEKALEELED 72
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
N + L Q L+FT+ + + + ++ K IS DV +++GP P P
Sbjct: 73 NYKKLEEFLYDQTALVFTDMNPFKLYKLLEETKEPSPLKPNQISPVDVVVEKGPTPIPPG 132
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
+ +L+ G+ + +G V + + TV K G+V+ PE AR L +L K K
Sbjct: 133 PMMAELQNAGIPVAIERGKVVVRETVTVVKAGEVVKPEVARALSVLGIKPIKI 185
>gi|154339904|ref|XP_001565909.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063227|emb|CAM45429.1| putative 60S acidic ribosomal subunit protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 323
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 24/201 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + LV + KY+ + + N+R+ ++ DVR + + F GK + A + K
Sbjct: 8 KREYEEHLVDCLTKYSCVLFVGMDNVRSQQVHDVRRALRGKAEFVMGKKTLQAKIVEKHA 67
Query: 82 EDEIEKNIHVVSSALKGQC----------GLLFTNRSKDDVLMWFDVYEDEDFAKSGFIS 131
+ KN + QC GL+FTN + ++ D + + A+ G I+
Sbjct: 68 Q---AKNASPGAKHFSEQCEEHNLLSGNTGLIFTNDNVQEIKAVLDSHRVKAPARVGAIA 124
Query: 132 TEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
DV +P +EP + L + T + KG+V + + V GD + A
Sbjct: 125 PCDV-----VVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSTGDKVDNSTA 179
Query: 188 RILKLLKKKMAKFKV-LLYLW 207
+L+ L ++V +L +W
Sbjct: 180 TLLQKLNISPFYYQVDVLSVW 200
>gi|410670704|ref|YP_006923075.1| acidic ribosomal protein P0 [Methanolobus psychrophilus R15]
gi|409169832|gb|AFV23707.1| acidic ribosomal protein P0 [Methanolobus psychrophilus R15]
Length = 339
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 85/174 (48%), Gaps = 7/174 (4%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKS 80
+KQ + +E+ + V+KY V V + +L+ +R + + + +N ++ A +S
Sbjct: 14 KKQEV-EEIKELVKKYPLFGVVGVAGIPAKQLQKMRRNLQGTAVLKVARNTLIKRAFDES 72
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
ED I + + Q L+FT ++ + + + K G I+ +D+ ++ G
Sbjct: 73 SED-----IQKMEGYIDTQTALIFTEQNPFRLYKVLEQSKSPSPIKGGTIAPKDIIVQAG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P P I +++ +G+ ++ G V + + TV K+G+V++ + A +L L+
Sbjct: 128 PTGFPPGPILGEMQAVGIPAAIDAGKVVVRETKTVAKEGEVVSQKLAAMLTRLE 181
>gi|410720443|ref|ZP_11359799.1| ribosomal protein L10 [Methanobacterium sp. Maddingley MBC34]
gi|410601225|gb|EKQ55745.1| ribosomal protein L10 [Methanobacterium sp. Maddingley MBC34]
Length = 335
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKE 139
D + N+ V+ + GQ L+FT + + + ED A++G I+ +D+ + +
Sbjct: 65 DSPKTNVKVLVDHMDGQPALIFTEMNP---FRLYKILEDSKTPAPARAGSIAIDDIVVPK 121
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P I +L+++G+ + KG + + +D T+ +GDV++ + A +L L
Sbjct: 122 GDTGFMPGPILGELQKIGIPAKIEKGKIVITEDKTIVAEGDVISRDVAGMLTRL 175
>gi|71754749|ref|XP_828289.1| 60S acidic ribosomal subunit protein [Trypanosoma brucei TREU927]
gi|71754751|ref|XP_828290.1| 60S acidic ribosomal subunit protein [Trypanosoma brucei TREU927]
gi|70833675|gb|EAN79177.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|70833676|gb|EAN79178.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 324
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E + +K H V + + CG ++FTN D+ D + + A+ G I+
Sbjct: 66 RAEGNKATDADKLFHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|261334114|emb|CBH17108.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 325
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E + +K H V + + CG ++FTN D+ D + + A+ G I+
Sbjct: 66 RAEGNKATDADKLFHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|261334113|emb|CBH17107.1| 60S acidic ribosomal subunit protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 325
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E + +K H V + + CG ++FTN D+ D + + A+ G I+
Sbjct: 66 RAEGNKATDADKLFHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|448622885|ref|ZP_21669534.1| acidic ribosomal protein P0 [Haloferax denitrificans ATCC 35960]
gi|445753393|gb|EMA04810.1| acidic ribosomal protein P0 [Haloferax denitrificans ATCC 35960]
Length = 348
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N + AL DE++
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLANRAL-----DEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + GQ L+ TN + F +Y++ + +K +G ++ D+ + EG
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNP------FALYKELEASKTPAPINAGEVAPNDIVIPEG 129
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+Q+G + G + + +D V G+ ++ E A +L L
Sbjct: 130 DTGVDPGPFVGELQQVGASARIMDGSIKVTEDSNVLSAGEEVSEELANVLAEL 182
>gi|448583281|ref|ZP_21646637.1| acidic ribosomal protein P0 [Haloferax gibbonsii ATCC 33959]
gi|445729510|gb|ELZ81105.1| acidic ribosomal protein P0 [Haloferax gibbonsii ATCC 33959]
Length = 349
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N + AL DE++
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLANRAL-----DEVD 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + GQ L+ TN + F +Y++ + +K +G ++ D+ + EG
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNP------FALYKELEASKTPAPINAGEVAPNDIVIPEG 129
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+Q+G + G + + +D V G+ ++ E A +L L
Sbjct: 130 DTGVDPGPFVGELQQVGASARIMDGSIKVTEDSNVLSAGEEVSEELANVLAEL 182
>gi|289742797|gb|ADD20146.1| 60s acidic ribosomal protein P0 [Glossina morsitans morsitans]
Length = 325
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E + +K H V + + CG ++FTN D+ D + + A+ G I+
Sbjct: 66 RAEGNKATDADKLFHQVCTDKQLLCGNTSMIFTNSEVSDITSVLDSHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|255569309|ref|XP_002525622.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
gi|223535058|gb|EEF36740.1| 60S acidic ribosomal protein P0, putative [Ricinus communis]
Length = 323
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L + +++Y+ I V + N+ +++L+ +R + DS GKN +M ++
Sbjct: 9 QKKVEYDKKLCRFLDEYSQILVVAADNVGSNQLQSIRQGLRGDSVVLMGKNTMMKRSVRL 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G I+ DV +
Sbjct: 69 HAEKTGNNAFLNLIPLLVGNVGLIFTKGELKEVREEIAKYKVGAPARVGLIAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLK 194
G ++P + L + T +NKG V + + KKG+ V + E A + KL
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVDIIKKGEKVGSSESALLAKLGI 183
Query: 195 KKMAKFKVLLYLW 207
+ + V+L ++
Sbjct: 184 RPFSYGLVVLTVY 196
>gi|433423122|ref|ZP_20406161.1| acidic ribosomal protein P0 [Haloferax sp. BAB2207]
gi|448568244|ref|ZP_21637821.1| acidic ribosomal protein P0 [Haloferax lucentense DSM 14919]
gi|448600815|ref|ZP_21656194.1| acidic ribosomal protein P0 [Haloferax alexandrinus JCM 10717]
gi|432198444|gb|ELK54725.1| acidic ribosomal protein P0 [Haloferax sp. BAB2207]
gi|445727194|gb|ELZ78808.1| acidic ribosomal protein P0 [Haloferax lucentense DSM 14919]
gi|445734828|gb|ELZ86384.1| acidic ribosomal protein P0 [Haloferax alexandrinus JCM 10717]
Length = 348
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N ++ AL DE+
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQSMRRELHGSAAVRMSRNTLVNRAL-----DEVN 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNPFALFKELEASKTPAPINAGEVAPNDIVIPEGDTGVDP 135
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + +D V G+ ++ E A +L L
Sbjct: 136 GPFVGELQQVGASARIMDGSIKVTEDSNVLSAGEEVSEELANVLAEL 182
>gi|315319175|gb|ADU04571.1| 60S acidic ribosomal protein PO [Phaseolus vulgaris]
Length = 320
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y I V + N+ +++L+++R + DS GKN +M ++ +
Sbjct: 9 EKKIAYDGKLCQLLEEYGQILVVNADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV-R 67
Query: 80 SQEDEIEKNIHV-VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
++ N+++ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 68 MHSEKTGNNVYLNLIPLLIGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVP 127
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
G ++P + L + T +NKG V + + +KG+
Sbjct: 128 PG-----NTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGE 168
>gi|325968425|ref|YP_004244617.1| 50S ribosomal protein L10 [Vulcanisaeta moutnovskia 768-28]
gi|323707628|gb|ADY01115.1| 50S ribosomal protein L10 [Vulcanisaeta moutnovskia 768-28]
Length = 353
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 8/176 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW---KDSRFFFGKNKVMAYAL 77
E+K + DEL + KY + + + N L++ R W + +R KN ++ AL
Sbjct: 19 EKKVRIVDELKELFSKYETVLIIDIHETSNRVLQEYRF-WLRRRGARVIKAKNTLVLIAL 77
Query: 78 GKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ D E + G+ L+FTN + ++ W A G I+ D+
Sbjct: 78 RQLMNDVSED----IEKLFTGENLLIFTNENPFEIARWIWGTGVRREAMPGDIAPFDLVA 133
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G P I + +L + + G + + KD + KKGD + + A ILK L
Sbjct: 134 PAGNTNMSPGPIMSKFGKLKIPIKVQDGKIWIVKDTVIVKKGDKINEDAAEILKKL 189
>gi|263173401|gb|ACY69932.1| 60S acidic ribosomal protein P0 [Cimex lectularius]
Length = 320
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++L++ +E+Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFNKLIQLLEEYPKCFIVGADNVGSKQMQQIRVSLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
IE+N + + ++G G +FT +V + A++G I+ V +
Sbjct: 66 RGHIERNQALEKIIPHIRGNVGFVFTRGELPEVRDKLLQNKVRAPARAGAIAPCPVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + L + T ++KG + + D + K+GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ +++ + Y+ +LD
Sbjct: 181 SPFSYGLVVEMVYDSGTCFEPRILD 205
>gi|126465991|ref|YP_001041100.1| acidic ribosomal protein P0 [Staphylothermus marinus F1]
gi|254807077|sp|A3DNI2.1|RLA0_STAMF RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|126014814|gb|ABN70192.1| LSU ribosomal protein L10P [Staphylothermus marinus F1]
Length = 338
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 31 VKAVEKYNNIF----VFSVQNMR---NSKLKDVRNDW-KDSRFFFGKNKVMAYALGKSQE 82
++ VE +F VF++ ++ ++L+ +R K F KNK++ AL +
Sbjct: 17 IEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNAGI 76
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
D + L GQ LLFT+ + ++ + D Y+ + + K G I+ +++ + EG
Sbjct: 77 DTSK-----FEELLTGQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
P I +L + T + + + +D V K GD ++ E A +L+ L + + K+
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKI 191
>gi|308160169|gb|EFO62669.1| Acidic ribosomal protein P0 [Giardia lamblia P15]
Length = 326
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS 80
R+Q +L + + +Y I + SV N+R+ ++ +R + + GKN ++ + +
Sbjct: 12 RRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVINQL 71
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
+D++ KN+ +K +FTN +L F + + AK+G I+ DV
Sbjct: 72 NDDKL-KNLL---PYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIIAPADV----- 122
Query: 141 PLPEFPHSIEPQLRQ-----------LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
IEP L Q LG+ T +NKG + + + KKGDV+TP A +
Sbjct: 123 -------VIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDVVTPSHATL 175
Query: 190 LKLLK 194
L+ L+
Sbjct: 176 LQRLE 180
>gi|147843260|emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]
Length = 320
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y I + + N+ +++L+++R + DS GKN +M ++ E +
Sbjct: 17 KLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQ 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L G GL+FT +V Y+ A+ G ++ DV + G
Sbjct: 77 AFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-----T 131
Query: 148 SIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMAKFKV 202
++P + L + T +NKG V + + +KGD V + E A + KL + + V
Sbjct: 132 GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLV 191
Query: 203 LLYLWYN 209
+L ++ N
Sbjct: 192 VLSVYDN 198
>gi|389626681|ref|XP_003710994.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae 70-15]
gi|59803168|gb|AAX07734.1| 60S acidic ribosomal protein-like protein [Magnaporthe grisea]
gi|351650523|gb|EHA58382.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae 70-15]
gi|440463490|gb|ELQ33070.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae Y34]
gi|440481080|gb|ELQ61700.1| 60S acidic ribosomal protein P0 [Magnaporthe oryzae P131]
Length = 313
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK-- 79
K D+L +E+Y +IF+ V N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFV 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
S+ E E+ + V KG G +FTN ++ A++G ++ +DV +
Sbjct: 68 SESPEYERLLPYV----KGNVGFVFTNSDLKEIRDKILQNRVRAPARAGAVAPDDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGGKVGASEATLLNML 176
>gi|225449110|ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y I + + N+ +++L+++R + DS GKN +M ++ E +
Sbjct: 17 KLCQLLDEYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQ 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L G GL+FT +V Y+ A+ G ++ DV + G
Sbjct: 77 AFLNLIPLLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-----T 131
Query: 148 SIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMAKFKV 202
++P + L + T +NKG V + + +KGD V + E A + KL + + V
Sbjct: 132 GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLV 191
Query: 203 LLYLWYN 209
+L ++ N
Sbjct: 192 VLSVYDN 198
>gi|148681358|gb|EDL13305.1| RIKEN cDNA 2610012O22, isoform CRA_c [Mus musculus]
Length = 60
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 27/30 (90%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDEL 30
MPKSKRDKKV+L+KT KKGLE KQNL +E+
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEEV 30
>gi|1710585|sp|P50345.1|RLA0_LUPLU RecName: Full=60S acidic ribosomal protein P0
gi|1143507|emb|CAA63786.1| P0 ribosomal protein [Lupinus luteus]
Length = 322
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y I V + N+ + +L+++R + DS GKN +M ++
Sbjct: 9 EKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRI 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + + L G GL+FT +V Y+ A G ++ DV +
Sbjct: 69 HAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMA 198
G P + L + T +NKG V + + KKGD V + E A + KL + +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 199 KFKVLLYLWYN 209
V+L ++ N
Sbjct: 188 YGLVVLSVYDN 198
>gi|225448367|ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
Length = 320
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + +++Y+ I + + N+ +++L+++R + DS GKN +M ++ E
Sbjct: 17 KLCQLLDEYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNT 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L G GL+FT +V Y+ A+ G ++ DV + G
Sbjct: 77 AFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGN-----T 131
Query: 148 SIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKLLKKKMAKFKV 202
++P + L + T +NKG V + + KKGD V + E A + KL + + V
Sbjct: 132 GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLV 191
Query: 203 LLYLWYN 209
+L ++ N
Sbjct: 192 VLSVYDN 198
>gi|387592202|gb|EIJ87226.1| hypothetical protein NEQG_02561 [Nematocida parisii ERTm3]
gi|387597455|gb|EIJ95075.1| hypothetical protein NEPG_00600 [Nematocida parisii ERTm1]
Length = 275
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 37 YNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95
Y + + N+ +++ + +R + F GKN + AL K E+ E + V +
Sbjct: 31 YKKFMIVDMTNISSNQCQTIRQGLRGKGEFLMGKNTTIKTALKKISENVPE--LKDVENV 88
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ--- 152
+K G++FTN S D+ F+ + AK G +S DV ++ P+ S+ P+
Sbjct: 89 IKNNVGIVFTNGSLSDIEDIFEANKVHAVAKPGDLSQCDVWIE--PIAT---SLTPEKTG 143
Query: 153 -LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK--MAKFKVLLYLWYN 209
+ LG+ T + KG + + +G + +A +L LL + K KVL Y
Sbjct: 144 FFQALGIATKITKGKIEILSKCQALYEGKRVGHSEAALLSLLGVTPFIYKMKVL----YA 199
Query: 210 KKEGTFENLLDREKTPMDIYDM 231
+G F + + TP + M
Sbjct: 200 YSDGKFFDCEYLKITPESVETM 221
>gi|16081488|ref|NP_393838.1| acidic ribosomal protein P0 [Thermoplasma acidophilum DSM 1728]
gi|12644552|sp|P57692.1|RLA0_THEAC RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|10639531|emb|CAC11503.1| acidic ribosomal protein P0 related protein [Thermoplasma
acidophilum]
Length = 314
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/196 (19%), Positives = 93/196 (47%), Gaps = 17/196 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNK-------VM 73
++K+ L +E+ + ++ ++ + +R +++D+R GKN+ +
Sbjct: 6 QQKKELVNEITQRIKASRSVAIVDTAGIRTRQIQDIR----------GKNRGKINLKVIK 55
Query: 74 AYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTE 133
L K+ E+ ++ + + GQ LL ++ ++ + + + G I+ E
Sbjct: 56 KTLLFKALENLGDEKLSKLKENSGGQIALLTSDLEPTEIYKIIESTFQKTAPRGGEIAPE 115
Query: 134 DVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
D+ ++ P + + +++GLQT + KG + + K+ KKG+ + ++A+IL++L
Sbjct: 116 DIVIQPMTTGFPPGPMMTEFQKVGLQTGVEKGKIAIKKETVFVKKGETIPKDKAKILEML 175
Query: 194 KKKMAKFKVLLYLWYN 209
+ K + + L Y+
Sbjct: 176 EIKPLEVGLQLLGLYS 191
>gi|448362536|ref|ZP_21551142.1| acidic ribosomal protein P0 [Natrialba asiatica DSM 12278]
gi|445648016|gb|ELZ00980.1| acidic ribosomal protein P0 [Natrialba asiatica DSM 12278]
Length = 348
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+E Y ++ + + + + +L+D+R D + +N + AL + D++ ++
Sbjct: 27 IENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALETAGLDDLVDDV--- 83
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEGPLPEFP 146
+GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG P
Sbjct: 84 ----EGQVGLIGTNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEGDTGVDP 133
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
+L+ +G + G + + +D TV + G ++ + A +L L + +V L L
Sbjct: 134 GPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNEL--GIEPKEVGLDL 191
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMEDD 234
EG L D E +DI E D
Sbjct: 192 RAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|448364834|ref|ZP_21553410.1| acidic ribosomal protein P0 [Natrialba aegyptia DSM 13077]
gi|445657467|gb|ELZ10294.1| acidic ribosomal protein P0 [Natrialba aegyptia DSM 13077]
Length = 348
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+E Y ++ + + + + +L+D+R D + +N + AL + D++ ++
Sbjct: 27 IENYESVGIVGIAGIPSKQLQDMRRDLHGTAELRVSRNTLQVRALETAGLDDLVDDV--- 83
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEGPLPEFP 146
+GQ GL+ TN + F +Y++ + +K+ G ++ D+ + EG P
Sbjct: 84 ----EGQVGLIGTNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEGDTGVDP 133
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
+L+ +G + G + + +D TV + G ++ + A +L L + +V L L
Sbjct: 134 GPFVGELQSIGANARIEDGSIQVMEDSTVLEAGGEVSADLANVLNEL--GIEPKEVGLDL 191
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMEDD 234
EG L D E +DI E D
Sbjct: 192 RAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|389860711|ref|YP_006362951.1| acidic ribosomal protein P0 [Thermogladius cellulolyticus 1633]
gi|388525615|gb|AFK50813.1| acidic ribosomal protein P0 [Thermogladius cellulolyticus 1633]
Length = 337
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEK 87
EL + ++++ I V + +KL+++R F K K++A +L +E I+
Sbjct: 16 ELAEEIKRHKTILVADLTGFPTNKLQELRKKIGKVAFIKVVKPKLLAISL---REAGIDP 72
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
++ L GQ LL ++ + ++ + ++ + K G +++ ++ + EG P
Sbjct: 73 EKTGLTKYLTGQVALLLSDINAFELNSLLEKHKSYTYYKPGDVASSEIVIPEGDTGIPPG 132
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLW 207
+ +L + T + + + KD V K GD ++PE A +L+ L + + K+ + +
Sbjct: 133 PMLSVFGRLKIPTKVVGNSIQIAKDTVVAKPGDQISPELASLLQKLDLPLKEVKLRVKVA 192
Query: 208 YN 209
Y+
Sbjct: 193 YD 194
>gi|448602296|ref|ZP_21656352.1| acidic ribosomal protein P0 [Haloferax sulfurifontis ATCC BAA-897]
gi|445747811|gb|ELZ99265.1| acidic ribosomal protein P0 [Haloferax sulfurifontis ATCC BAA-897]
Length = 349
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
DELV +E Y ++ V V + + +L+ +R + S +N + AL DE+
Sbjct: 21 DELVDFIESYESVGVVGVAGIPSRQLQAMRRELHGSAAVRMSRNTLANRAL-----DEVN 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEG 140
+ + GQ L+ TN + F +Y++ + +K +G ++ D+ + EG
Sbjct: 76 DGFEELKEYIAGQVALIGTNDNP------FALYKELEASKTPAPINAGEVAPNDIVIPEG 129
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+Q+G + G + + +D V G+ ++ E A +L L
Sbjct: 130 DTGVDPGPFVGELQQVGASARIMDGSIKVTEDSNVLSAGEEVSEELANVLAEL 182
>gi|68060593|ref|XP_672283.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489221|emb|CAI04050.1| hypothetical protein PB301503.00.0 [Plasmodium berghei]
Length = 228
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++YN I + V N+ + ++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYNKILIVHVDNVGSDQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + +IEK + +V K G +F +V + A+ G I+ DV +
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFCKDDLSEVRNIILQNKSPAPARLGVIAPIDVFI 123
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
GP P S + LG+ T + KG + + ++ + K+G+ ++ A +L+
Sbjct: 124 PPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVSASSATLLQ 176
>gi|429190271|ref|YP_007175949.1| 50S ribosomal protein L10 [Natronobacterium gregoryi SP2]
gi|448326183|ref|ZP_21515552.1| acidic ribosomal protein P0 [Natronobacterium gregoryi SP2]
gi|429134489|gb|AFZ71500.1| ribosomal protein L10 [Natronobacterium gregoryi SP2]
gi|445613092|gb|ELY66803.1| acidic ribosomal protein P0 [Natronobacterium gregoryi SP2]
Length = 346
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIE 86
+EL +E Y ++ + + + + +L+D+R D S +N + AL ++ D++
Sbjct: 21 EELADLLEDYESVGIVGLTGIPSKQLQDMRRDLHGSAELRVSRNTLQIRALEEAGYDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++ +G GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 SDV-------EGHVGLIATNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
P +L+ +G + G + + +D TV + G+ ++ + A +L L +
Sbjct: 128 DTGVDPGPFVGELQGIGANARIEDGSIQVMEDSTVLEAGEEVSVDLANVLNEL--GIEPK 185
Query: 201 KVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDD 234
+V L L EG L D E +DI E D
Sbjct: 186 EVGLDLRAVVAEGV---LFDPEDLDIDIEAYESD 216
>gi|730579|sp|P39097.1|RLA0_LEIIN RecName: Full=60S acidic ribosomal protein P0
gi|430759|emb|CAA51264.1| ribosomal PO protein [Leishmania infantum]
gi|430760|emb|CAA51263.1| ribosomal PO protein [Leishmania infantum]
Length = 323
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDV-RNDWKDSRFFFGKNKVMAYALGKSQ 81
K+ + LV + KY+ + + N+R+ ++ DV R + F GK + + K
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRA 67
Query: 82 E------------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGF 129
+ D+ E+ + L G GL+FTN + ++ D + + A+ G
Sbjct: 68 QAKDASPEAKHFNDQCEE-----YNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGA 122
Query: 130 ISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
IS DV + G +EP + L + T + KG+V + + V GD +
Sbjct: 123 ISPCDVIVAAG-----STGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNS 177
Query: 186 QARILKLLKKKMAKFKV-LLYLW 207
A +L+ L ++V +L +W
Sbjct: 178 TATLLQKLNISPFYYQVNVLSVW 200
>gi|154151789|ref|YP_001405407.1| acidic ribosomal protein P0 [Methanoregula boonei 6A8]
gi|154000341|gb|ABS56764.1| ribosomal protein L10 [Methanoregula boonei 6A8]
Length = 282
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIH 90
K +++ I + + + +++ +R + + +N ++ +ALG EI +
Sbjct: 21 KHAKEFTLIGLVDMYGIPAQQVQQIRRNLRGKAVIKVTRNTLIEHALG-----EIGGDTK 75
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
++ + G ++F+N + + + + + AK+G + ED+ +++GP P I
Sbjct: 76 GLTRFISGHSAVIFSNDNPFKLYKQLEKTKTKMAAKAGETAPEDIVIEKGPTSFKPGPIV 135
Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+L+Q G+ + G V + + TV KKG V++ + A +L
Sbjct: 136 GELQQAGIPAAIEGGKVKIRETKTVVKKGAVISAKLADVL 175
>gi|313125988|ref|YP_004036258.1| 50S ribosomal protein L10 [Halogeometricum borinquense DSM 11551]
gi|448285828|ref|ZP_21477067.1| acidic ribosomal protein P0 [Halogeometricum borinquense DSM 11551]
gi|312292353|gb|ADQ66813.1| LSU ribosomal protein L10P [Halogeometricum borinquense DSM 11551]
gi|445575858|gb|ELY30321.1| acidic ribosomal protein P0 [Halogeometricum borinquense DSM 11551]
Length = 347
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEK 87
EL +E+Y ++ V SV + + +L+ +R D S +N ++ AL +++
Sbjct: 23 ELTDFLEEYQSVGVVSVTGIPSRQLQSMRRDLHGSAELRMSRNTLVTRAL-----EQVND 77
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ ++ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 78 GLEELTDYVYGQVALVGTNDNPFGLYKQLEASKTPAPINAGEVAPNDIVIPEGDTGVDPG 137
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+L+Q+G + +G + + +D V +G+V++ E + +L
Sbjct: 138 PFVGELQQVGASARIMEGSIKVTEDSHVLDEGEVVSEELSNVL 180
>gi|6226694|sp|Q94660.2|RLA0_PLAF8 RecName: Full=60S acidic ribosomal protein P0
gi|4191737|gb|AAD10140.1| acidic ribosomal phosphoprotein PO [Plasmodium falciparum]
Length = 316
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y+ I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVL----MWFDVYEDEDFAKSGFISTE 133
+ + +IEK + +V K G +F KDD+ + D A+ G I+
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFC---KDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 134 DVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
DV + GP P S L LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 121 DVFIPPGPTGMDP-SHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLR 177
>gi|39651867|emb|CAD58931.1| 60S acidic ribosomal protein P0 [Timarcha balearica]
Length = 316
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSR-FFFGKNKVMAYALGKSQ 81
K N +L++ +E Y F+ S N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFTKLIQLLEDYPKCFIVSTDNVGSKQMQQIRISLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+E+N + + +KG G +FT ++D++ D + A++G I++ V
Sbjct: 66 RGHVERNPGLEKILPHIKGNVGFVFT---RNDLVEIRDKLLENKVRAPARAGAIASVPVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+P + P + L + T ++K + + D + K GD + P +A +L +
Sbjct: 123 -----IPAQNTGLAPDKTSFFQALSIPTKISKATIEIINDIPILKPGDKVGPSEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|266946|sp|P29764.1|RLA0_CHERU RecName: Full=60S acidic ribosomal protein P0; AltName:
Full=Light-induced 34 kDa protein
gi|18141|emb|CAA33276.1| 34kD light-induced protein [Chenopodium rubrum]
Length = 321
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y+ + + S N+ +++L+ +R + DS GKN +M ++
Sbjct: 9 EKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNTMMKRSIRL 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +N+ V GL+FT + V Y+ A+ G ++ DV +
Sbjct: 69 HAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVAPIDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
G P + L + T +NKG V + + KKG+ + +A +L
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLA 179
>gi|397582798|gb|EJK52423.1| hypothetical protein THAOC_28299 [Thalassiosira oceanica]
Length = 321
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERK + + + Y+ +F+ V N+ + +++ R + + GKN +M + +
Sbjct: 6 ERKAEYFETMKGHMANYSKMFIVQVDNVGSKQIQQTRVALRGKAEILMGKNTMMRKCIRE 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ I + + +G G +FTN +V + A+ G ++ DV + +
Sbjct: 66 FVEENPGSPIEQLEACCRGNVGFVFTNGDLGEVREVIESNVRPAPARVGAVAPIDVIVPK 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
GP P + L + T + +G + + D + G+ +T QA +L+ L
Sbjct: 126 GPTGCDPGQTA-FFQTLQISTKITRGQIEMTNDTHLIAVGEKVTASQAALLQKL 178
>gi|15790195|ref|NP_280019.1| acidic ribosomal protein P0 [Halobacterium sp. NRC-1]
gi|169235924|ref|YP_001689124.1| acidic ribosomal protein P0 [Halobacterium salinarum R1]
gi|133039|sp|P13553.1|RLA0_HALSA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|229564302|sp|B0R4W1.1|RLA0_HALS3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|43534|emb|CAA31431.1| unnamed protein product [Halobacterium salinarum]
gi|10580651|gb|AAG19499.1| 50S ribosomal protein L10P [Halobacterium sp. NRC-1]
gi|167726990|emb|CAP13776.1| 50S ribosomal protein L10 [Halobacterium salinarum R1]
Length = 352
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
ELV +E Y+++ V +V + + +L+D+R + +N ++ AL +E
Sbjct: 22 ELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL-----EEAGD 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEGP 141
+ ++ ++G+ GL+ TN + F +Y+ + +K +G ++ D+ + EG
Sbjct: 77 GLDTLTEYVEGEVGLVATNDNP------FGLYQQLENSKTPAPINAGEVAPNDIVVPEGD 130
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + +G + + D V ++G+ ++ + + +L L
Sbjct: 131 TGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSEL 182
>gi|20502057|gb|AAM21934.1| ribosomal phosphoprotein P0 [Plasmodium berghei ANKA]
Length = 315
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 8/174 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++YN I + V N+ + ++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYNKILIVHVDNVGSDQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + +IEK + +V K G +F +V + A+ G I+ DV +
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFCKDDLSEVRNIILQNKSPAPARLGVIAPIDVFI 123
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
GP P S + LG+ T + KG + + ++ + K+G+ ++ A +L+
Sbjct: 124 PPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVSASSATLLQ 176
>gi|448739217|ref|ZP_21721232.1| acidic ribosomal protein P0 [Halococcus thailandensis JCM 13552]
gi|445799812|gb|EMA50181.1| acidic ribosomal protein P0 [Halococcus thailandensis JCM 13552]
Length = 346
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEK 87
+L + +E Y ++ + S+ + + +L+ +R D S +N ++ AL D+ +
Sbjct: 22 DLAELIETYESVGIVSIAGIPSRQLQAMRRDLHGSAELRVARNTLLVRAL-----DDADD 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEGP 141
+ + + GQ GL+ + + F +Y + + +K +G ++ +E+ EG
Sbjct: 77 GVEELIDEVDGQVGLIGADANP------FGLYRELEASKTPAPINAGEVAPNPIEIPEGD 130
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P +L+Q+G + G + + +D TV ++G+ ++ A +L L+
Sbjct: 131 TGIDPGPFVGELQQVGAAARIMDGSIQVTEDSTVLEEGEEVSQTLANVLGELE 183
>gi|298675986|ref|YP_003727736.1| 50S ribosomal protein L10 [Methanohalobium evestigatum Z-7303]
gi|298288974|gb|ADI74940.1| ribosomal protein L10 [Methanohalobium evestigatum Z-7303]
Length = 346
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVV 92
++ Y+ + S+ + +L+ +R + KD +N ++ AL K+ + +V
Sbjct: 29 IQSYSLFGIVSISGIPAKQLQVMRRELKDIAVLKVSRNTLVTRALEKAGGTAKDLEDYV- 87
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
Q GL+FTN + + + + K G I+ +D+ ++EG P I
Sbjct: 88 ----DAQIGLIFTNENPFKIYKILEKSKSPSPIKPGAIAPKDIVVEEGATGFPPGPIIGD 143
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
L+ +G+ ++ G V++ + TV ++GD ++ + A +L L+
Sbjct: 144 LQSVGIPAAIDSGKVSISETTTVAREGDKVSQKLAAMLNRLE 185
>gi|255731328|ref|XP_002550588.1| 60S acidic ribosomal protein P0 [Candida tropicalis MYA-3404]
gi|240131597|gb|EER31156.1| 60S acidic ribosomal protein P0 [Candida tropicalis MYA-3404]
Length = 313
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ ++R + ++ GKN ++ A+
Sbjct: 6 EKKVQYFTKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGEAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ E EK + V KG G +FTN D+ D S ++
Sbjct: 66 FLSELPEFEKLLPFV----KGNVGFIFTNG---------DLKTIRDTVVSNVVAAPARAG 112
Query: 138 KEGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
P +P +EP + LG+ T + +G + + D V ++ + P +A +
Sbjct: 113 AIAPKDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
L +L + + + Y+ + + P I D+ DDE
Sbjct: 173 LNMLNISPFTYGMTVVQVYD----------NGQVFPSSILDITDDE 208
>gi|336477900|ref|YP_004617041.1| 50S ribosomal protein L10 [Methanosalsum zhilinae DSM 4017]
gi|335931281|gb|AEH61822.1| ribosomal protein L10 [Methanosalsum zhilinae DSM 4017]
Length = 345
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVV 92
+ Y V + + + + +R + KD+ +N ++ AL +Q DE NI +
Sbjct: 27 IRSYPLFAVAGIGGIPAKQFQIMRRELKDTAVIKVSRNTLIERAL--NQADE---NIGQM 81
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
+ ++ Q L+FTN + + + + K+G ++ +D+ +++GP P I
Sbjct: 82 NEFVELQTALMFTNENPFKLYKLLEQSKTPSPIKAGTVAPKDISVEKGPTSFPPGPILGD 141
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
L+ +G+ + +G V + ++ V KKG+ ++ + A +L L+
Sbjct: 142 LQSVGIPAAIEQGKVVIKENKVVAKKGETVSQKLAAMLARLE 183
>gi|129771094|gb|ABO31368.1| 60S ribosomal protein [Gossypium hirsutum]
Length = 228
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y + V + N+ +++++++R + DS GKN +M ++
Sbjct: 5 EKKSQYDQKLCRLLDEYTQVLVVAADNVGSTQMQNIRKGLRGDSIILMGKNTMMKRSIRL 64
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G G +FT +V Y+ A+ G ++ DV +
Sbjct: 65 HAERTGNDAFKNLLPLLVGNVGFIFTKGDLKEVREEIAKYKVGAPARVGLVAPIDVIVPP 124
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + +KG+ + +A +L L +
Sbjct: 125 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIVTAVELIRKGEKVGSSEAALLSKLGIRPFS 183
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 184 YGLVVVSVYD 193
>gi|359417692|ref|ZP_09209778.1| acidic ribosomal protein P0, partial [Candidatus Haloredivivus sp.
G17]
gi|358031951|gb|EHK00769.1| acidic ribosomal protein P0 [Candidatus Haloredivivus sp. G17]
Length = 174
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK---NI 89
+E+Y I + +QN+ + +L+ ++ + K+ + + +M A+ K+++ +IE+ N
Sbjct: 25 IERYPVIGILDMQNLPSRQLQQMKKEMKEFADIKMSRKTLMQIAIEKAEKKDIEQLEEND 84
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSI 149
V Q +F+++ + + A+ G IS D+E+ EG P +
Sbjct: 85 AV-------QPAFIFSDKDPFQLYSLIKKNKTSAAAQGGEISPSDIEVPEGDTGIGPGPM 137
Query: 150 EPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLT 183
+L+Q G Q ++ G + + + T+ +KGD +T
Sbjct: 138 LGKLQQTGAQVQVDDGSIHVMQSATMIEKGDTIT 171
>gi|123482446|ref|XP_001323785.1| ribosomal protein L10 [Trichomonas vaginalis G3]
gi|121906656|gb|EAY11562.1| ribosomal protein L10, putative [Trichomonas vaginalis G3]
Length = 314
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVS- 93
KY+ + V + QN+ +++L +R + FGKN +M A+ DE++ I ++
Sbjct: 24 KYHKVAVVTAQNVTSNQLMKIRAGVSSFAEVLFGKNSLMRRAV-----DELKSEIPSITK 78
Query: 94 --SALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
L GL+FTN S + D AK G I+ DV +K P I+
Sbjct: 79 LEKHLTNGAGLIFTNGSFKAIKEVIDANCLGSAAKPGSIAPCDVVIKPQRTSISPTDIK- 137
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
L L +Q + KG + + + + +G + +A IL +L
Sbjct: 138 VLHALNIQCKVFKGTIEITGEKQLIWEGQKVGASEANILGML 179
>gi|410081064|ref|XP_003958112.1| hypothetical protein KAFR_0F03810 [Kazachstania africana CBS 2517]
gi|372464699|emb|CCF58977.1| hypothetical protein KAFR_0F03810 [Kazachstania africana CBS 2517]
Length = 311
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + GKN ++ A+
Sbjct: 6 EKKVEYFSKLREYLEEYKSVFVVGVDNVSSQQMHEVRKALRGRGVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + + KG G +FTN S D+ A++G ++ ED+ +
Sbjct: 66 FIADLPDYEKLLPFI----KGNVGFIFTNDSLKDIKEEIVSNTVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V + G+ + P +A +L LL
Sbjct: 122 T-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEAALLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P +I D+ DDE
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPANILDITDDE 208
>gi|254577829|ref|XP_002494901.1| 60S acidic ribosomal protein P0 [Zygosaccharomyces rouxii]
gi|238937790|emb|CAR25968.1| ZYRO0A12452p [Zygosaccharomyces rouxii]
Length = 310
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ VR + GKN ++ A+
Sbjct: 6 EKKVEYFSKLREYLEEYKSIFVVGVDNVSSQQMHQVRRALRGRGVILMGKNTMVRRAVRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ + EK + V KG G +FTN S D+ ++ + ++
Sbjct: 66 FLSELPQYEKLLPFV----KGNVGFVFTNDSLKDI---------KEVIVANKVAAPARAG 112
Query: 138 KEGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
P + +EP + LG+ T + +G + + D V + G+ + P +A +
Sbjct: 113 AIAPGDIWVTAMNTGMEPGKTSFFQALGVPTKIARGTIEISSDVKVVEAGNRVGPSEAAL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
L LL F +++ Y+ D + P I D+ D+E
Sbjct: 173 LNLLNISPFTFGLVITQVYD----------DGQIFPASILDITDEE 208
>gi|323336744|gb|EGA78008.1| Mrt4p [Saccharomyces cerevisiae Vin13]
Length = 107
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 67 FGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK 126
GK KV+ ALG+ +E+E ++N++ +S G GLLFT+ + V +F Y D+++
Sbjct: 1 MGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSR 60
Query: 127 SGFISTEDVELKEG---------PLPE---FPHSIEPQLR 154
+ + EG P E HS+EP +R
Sbjct: 61 PNTKAPLTFTIPEGIVYSRGGQIPAEEDVPMIHSLEPTMR 100
>gi|43454|emb|CAA33180.1| unnamed protein product [Halobacterium salinarum]
Length = 352
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
ELV +E Y+++ V +V + + +L+D+R + +N ++ AL +E
Sbjct: 22 ELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAAVRMSRNTLLVRAL-----EEAGD 76
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK------SGFISTEDVELKEGP 141
+ ++ ++G+ GL+ TN + F +Y+ + +K +G ++ D+ + EG
Sbjct: 77 GLDTLTEYVEGEVGLVATNDNP------FGLYQQLENSKTPAPINAGEVAPNDIVVPEGD 130
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + +G + + D V ++G+ ++ + + +L L
Sbjct: 131 TGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSEL 182
>gi|110668799|ref|YP_658610.1| acidic ribosomal protein P0 [Haloquadratum walsbyi DSM 16790]
gi|109626546|emb|CAJ53009.1| 50S ribosomal protein L10 [Haloquadratum walsbyi DSM 16790]
Length = 359
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIE 86
DELV +++Y++I + +V + + +L+ +R D + + +N + AL +E+
Sbjct: 24 DELVSFIDQYDSIGIVNVAGIPSRQLQSMRRDLYGSAAIRMSRNTLTTRAL-----EEVA 78
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+++ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 79 DGCEELTTFVAGQVALVGTNDNPFGLYKQLEASKTPAPISAGEVAPNDIVIPEGDTGVDP 138
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + ++ V G+ ++ E + +L L
Sbjct: 139 GPFVGELQQVGASARIMDGSIKVTEESQVLDSGEEVSSELSGVLAEL 185
>gi|342890200|gb|EGU89062.1| hypothetical protein FOXB_00411 [Fusarium oxysporum Fo5176]
Length = 313
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K N D+L +E YN+IF+ V N+ + ++ ++R + GKN ++ AL
Sbjct: 6 ENKANYFDKLKGLLEAYNSIFIVEVDNVSSQQMHEIRQALRSKGVVLMGKNTMVRRALKT 65
Query: 80 SQED--EIEKNI-HVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTE 133
D E E+ + HV KG G +FTN + D+++ V +
Sbjct: 66 FIPDSPEYERLLPHV-----KGNVGFVFTNDDLKEVRDIILANKVAAPARAGAL---APA 117
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
DV + G +EP + LG+ T + +G + + D + + G + P +A +
Sbjct: 118 DVWVPAG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L +L + + + Y++ + ++LD
Sbjct: 173 LNMLNISPFTYGMGISQVYDQGQSFPPSVLD 203
>gi|385804306|ref|YP_005840706.1| 50S ribosomal protein L10 [Haloquadratum walsbyi C23]
gi|339729798|emb|CCC41079.1| 50S ribosomal protein L10 [Haloquadratum walsbyi C23]
Length = 361
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIE 86
DELV +++Y++I + +V + + +L+ +R D + + +N + AL +E+
Sbjct: 24 DELVSFIDQYDSIGIVNVAGIPSRQLQSMRRDLYGSAAIRMSRNTLTTRAL-----EEVA 78
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+++ + GQ L+ TN + + + + +G ++ D+ + EG P
Sbjct: 79 DGCEELTTFVAGQVALVGTNDNPFGLYKQLEASKTPAPISAGEVAPNDIVIPEGDTGVDP 138
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+L+Q+G + G + + ++ V G+ ++ E + +L L
Sbjct: 139 GPFVGELQQVGASARIMDGSIKVTEESQVLDSGEEVSSELSGVLAEL 185
>gi|123467794|ref|XP_001317290.1| ribosomal protein L10 [Trichomonas vaginalis G3]
gi|121900020|gb|EAY05067.1| ribosomal protein L10, putative [Trichomonas vaginalis G3]
Length = 313
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED-----EIEKNI 89
KY+ + V + QN+ +++L +R + FGKN +M A+ + +++ E+EKN
Sbjct: 24 KYHKVAVVTAQNVTSNQLMKIRAGVSGFAEVLFGKNSLMRRAVDELKDEIPSITELEKN- 82
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSI 149
L GL+FTN S + D AK G I+ DV +K P I
Sbjct: 83 ------LSNGAGLIFTNGSFKAIKEVIDANCLGSAAKPGSIAPCDVFIKPQRTSISPTDI 136
Query: 150 EPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ L L +Q + KG + + + + +G + +A IL +L
Sbjct: 137 K-VLHALNIQCKVFKGTIEITGEKQLIWEGQKVGASEANILGML 179
>gi|297527345|ref|YP_003669369.1| 50S ribosomal protein L10 [Staphylothermus hellenicus DSM 12710]
gi|297256261|gb|ADI32470.1| ribosomal protein L10 [Staphylothermus hellenicus DSM 12710]
Length = 337
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
L GQ L+FT+ + ++ + D Y+ + + K G I+ +++ + EG P I +
Sbjct: 85 LTGQNLLMFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSK 144
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
L + T + + + +D V K GD ++ E A +L+ L + + K+
Sbjct: 145 LKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKI 191
>gi|62902643|gb|AAY19281.1| acidic ribosomal P0 protein [Euplotes raikovi]
Length = 331
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 17/138 (12%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALG 78
E+K + +KY+ + N+ ++ R + + DS GKN V+ AL
Sbjct: 10 EKKDKFFQRIYDTFDKYSRALLVQCDNISARQIHATRKELRQNDSLMLMGKNTVIKAALA 69
Query: 79 K--SQEDEIEKNIHVVSSA-------------LKGQCGLLFTNRSKDDVLMWFDVYEDED 123
K ++ D + + S LKG G++FTNR DV D + E
Sbjct: 70 KRIAKPDPEDSDYETRSKTWTPLDKMEPLGKLLKGNLGIIFTNRDLPDVKDIVDKHAREA 129
Query: 124 FAKSGFISTEDVELKEGP 141
AK G ++ DV +K GP
Sbjct: 130 PAKVGAVAQCDVFIKPGP 147
>gi|406604655|emb|CCH43913.1| 60S acidic ribosomal protein P0 [Wickerhamomyces ciferrii]
Length = 312
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IF+ V N+ + ++ +VR + + GKN ++ A+
Sbjct: 6 EKKVEYFAKLRELLEEYKSIFIVGVDNVSSQQMHEVRKALRGKAVILMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ + EK + V KG G +FTN D+ DV D A
Sbjct: 66 FLSELPDYEKLLPYV----KGNVGFVFTNSDLKDIR---DVIIDNKVAAP--ARAGAFAP 116
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +P +EP + LG+ T + +G + + D V + G + P +A +L LL
Sbjct: 117 ADVWVPAINTGLEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGAKVGPSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P + D+ DDE
Sbjct: 177 NISPFTYGLAVIQVYD----------NGQVFPSSVLDITDDE 208
>gi|448079500|ref|XP_004194395.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
gi|359375817|emb|CCE86399.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
Length = 309
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 34/213 (15%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+E+Y +IF+ V N+ + ++ ++R + ++ GKN ++ A+ S+ E EK +
Sbjct: 19 LEEYKSIFIVGVDNVSSQQMHEIRKALRGEATVLMGKNTMVRRAIRGFLSELPEYEKLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEFP 146
V KG G +FTN D+ D S ++ P +P
Sbjct: 79 FV----KGNVGFIFTNG---------DLKSIRDVVVSNVVAAPARAGAIAPKDVWIPAGN 125
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V +K + P +A +L +L + +
Sbjct: 126 TGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDVRVGPSEATLLNMLNISPFTYGM 185
Query: 203 LLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ Y+ + + P I D+ DDE
Sbjct: 186 SVIQVYD----------NGQVFPASILDITDDE 208
>gi|150400014|ref|YP_001323781.1| acidic ribosomal protein P0 [Methanococcus vannielii SB]
gi|133042|sp|P15826.2|RLA0_METVS RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E; AltName: Full=ML2
gi|44743|emb|CAA33410.1| ribosomal protein L10 [Methanococcus vannielii]
gi|150012717|gb|ABR55169.1| ribosomal protein L10 [Methanococcus vannielii SB]
Length = 336
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G I+ D+E+K G P +L+ +G+ ++KG + + +D V K+GDV++P+
Sbjct: 118 KGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPK 177
Query: 186 QARILKLLKKK 196
A +L L K
Sbjct: 178 LAVVLSALGIK 188
>gi|242088805|ref|XP_002440235.1| hypothetical protein SORBIDRAFT_09g028230 [Sorghum bicolor]
gi|241945520|gb|EES18665.1| hypothetical protein SORBIDRAFT_09g028230 [Sorghum bicolor]
Length = 319
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +++Y + V N+ + +L+D+R + DS GKN ++ +
Sbjct: 9 EKKIAYDKKLCALLDEYTKVLVALADNVGSKQLQDIRRGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAEKTGNNAFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVSP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|449523986|ref|XP_004169004.1| PREDICTED: NAD-dependent malic enzyme 59 kDa isoform,
mitochondrial-like [Cucumis sativus]
Length = 229
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 7 DKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS 63
D + K +KG + K++ + + + VE YN++FVF+V+NMRN K K++R K +
Sbjct: 172 DSTLLYQKQRRKGRDHKKSTVESIRQTVENYNSVFVFTVENMRNLKFKELREQLKST 228
>gi|348686832|gb|EGZ26646.1| hypothetical protein PHYSODRAFT_353332 [Phytophthora sojae]
Length = 317
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYA--- 76
ERK ++L +E Y IF+ V N+ +++++ +R + + GKN +M
Sbjct: 6 ERKLEYFEKLEALLENYTRIFLVGVDNVGSAQMQQIRLVLRGRAEVLMGKNTLMRKVFHN 65
Query: 77 -LGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFIST 132
+ K+ +E+ I + LKG G +FTN DD+ ++ E A+ G I+
Sbjct: 66 FVKKNPGHPLEQFIPL----LKGNVGFVFTN---DDLAEIREILESNRVPAPARVGSIAP 118
Query: 133 EDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
DV + GP P + L + T + KG + + + + +KG+ + +A +L+
Sbjct: 119 VDVIVPPGPTGADPGQTS-FFQALQIATKIQKGQIEIVTEVLLTRKGEKVGNSEAALLQK 177
Query: 193 LKKKMAKFKVLLYLWYN 209
L K + +++ Y+
Sbjct: 178 LDIKPFSYGLVIEQVYD 194
>gi|221056338|ref|XP_002259307.1| ribosomal phosphoprotein [Plasmodium knowlesi strain H]
gi|193809378|emb|CAQ40080.1| ribosomal phosphoprotein, putative [Plasmodium knowlesi strain H]
Length = 314
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ D+L +++Y I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQIYMDKLSSLIQQYTKILIVHVDNVGSNQMATVRQSLRGKAIILMGKNTRIRTALKK 67
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY---EDEDFAKSGFISTED 134
+ + +IEK + +V K G +F KDD+ ++ + A+ G I+ D
Sbjct: 68 NLQTVPQIEKLLPLV----KLNMGFVF---CKDDLTEVRNIILQNKSPAPARLGVIAPID 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
V + GP P S + LG+ T + KG + + ++ + K+G+ +T A +L+
Sbjct: 121 VFIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQENVHLIKQGEKVTASSATLLQ 176
>gi|156837550|ref|XP_001642798.1| hypothetical protein Kpol_385p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113367|gb|EDO14940.1| hypothetical protein Kpol_385p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 311
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-G 78
E+K +L + E+Y ++FV V N+ + ++ VR + GKN ++ A+ G
Sbjct: 6 EKKVEYFAKLREYFEEYKSLFVVGVDNVSSQQMHQVRKALRGRGVVLMGKNTMVRRAIRG 65
Query: 79 KSQE-DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
E ++EK + V KG G +FTN S D+ + A++G ++ ED+ +
Sbjct: 66 LVTELPDLEKLLPFV----KGNVGFIFTNESLRDIKEVIVANKVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + P +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGPSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P +I D+ DDE
Sbjct: 177 NISPFTYGLTVVQVYD----------NGQVFPSNILDITDDE 208
>gi|336254632|ref|YP_004597739.1| Acidic ribosomal protein P0-like protein [Halopiger xanaduensis
SH-6]
gi|335338621|gb|AEH37860.1| Acidic ribosomal protein P0-like protein [Halopiger xanaduensis
SH-6]
Length = 350
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIE 86
DEL + Y ++ + + + + +L+D+R D + + +N + AL + D++
Sbjct: 21 DELADLLADYESVGIVGLTGIPSKQLQDMRRDLYGTAELRVSRNTLQIRALEDAGYDDLV 80
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEG 140
++ +G GL+ TN + F +Y++ + +K+ G ++ D+ + EG
Sbjct: 81 DHV-------EGHVGLVATNDNP------FTLYKELEASKTPAPINEGEVAPNDIVIPEG 127
Query: 141 PLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 128 DTGIDPGPFVGELQSIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL 180
>gi|407464240|ref|YP_006775122.1| acidic ribosomal protein P0 [Candidatus Nitrosopumilus sp. AR2]
gi|407047428|gb|AFS82180.1| acidic ribosomal protein P0 [Candidatus Nitrosopumilus sp. AR2]
Length = 288
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKS 80
RK + +L++ +KY + + ++ +R++++ +R K F K+KV AL
Sbjct: 11 RKTQMYQQLLELPKKYKVVSIIQMRKVRSTQILPLRKTLKGQVEFVCVKDKVAVKALETL 70
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRS---------KDDVLMWFDVYEDEDFAKSGFIS 131
I+ I LKGQ +FT+ S K+ ++M A+ G ++
Sbjct: 71 DVPGIKDLID----DLKGQIMFIFTDMSPFKLNVLLAKNKIMMA---------ARGGDVA 117
Query: 132 TEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ D+ + P + + ++ G+ T +++G + + KD T +KG V+ + A IL
Sbjct: 118 SVDIVVPAKNTGIAPGPMLTEFKEAGIPTKIDQGTIWIAKDSTPVEKGGVINEKLASILG 177
Query: 192 LLKKKMAKFKVLLY--LWYNKKEGTFENLLDREK 223
L K + + LY L K E ++D EK
Sbjct: 178 KLDIKPVEAGISLYSALEDGLKYAEAEMVIDVEK 211
>gi|62083433|gb|AAX62441.1| ribosomal protein P0 [Lysiphlebus testaceipes]
Length = 223
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +L++ +++Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFVKLIQLLDEYPKCFIVGADNVGSKQMQQIRMSLRGTGVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+ +E+N H+ + +KG G +FT + D++ D + A++G I+ V
Sbjct: 66 KGHVERNAHLERILPHIKGNVGFVFT---RGDLVEVRDKLVENKVRAPARNGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDIHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVQQVYDSGTIFAPEILD 205
>gi|385303749|gb|EIF47803.1| 60s acidic ribosomal protein p0 [Dekkera bruxellensis AWRI1499]
Length = 313
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K L + V+ + ++FV + N+ + ++ +VR + ++ GKN ++ AL
Sbjct: 6 EKKAEYFLRLKQYVQDFKSVFVVGIDNVSSQQMHEVRKALRGEAVVVMGKNTMIRRALRN 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTED 134
++ + EK + ++G G +FTN + +V++ V A+ G I+ D
Sbjct: 66 FVNEFPDYEK----LMPYIRGNVGFIFTNGDLKHIKEVVLANQVAAP---ARPGAIAPCD 118
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V + G +EP + LG+ T + +G + + D + K + P +A++L
Sbjct: 119 VYVPAGNT-----GMEPGKTSFFQALGVPTKIARGTIEITSDVKILDKDQKVGPSEAQLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+LK F + + Y+ D + P + D+ DDE
Sbjct: 174 NMLKISPFTFAMSVIEVYD----------DGDIFPSSLLDITDDE 208
>gi|388579453|gb|EIM19776.1| ribosomal protein P0 [Wallemia sebi CBS 633.66]
Length = 312
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + L + VE Y +IF+ ++ N+ ++++ +R + + GKN ++ AL
Sbjct: 8 KEQYFNRLQELVETYPSIFIVNIDNVSSNQMHQIRQALRGKGQVLMGKNTMVRRAL---- 63
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ I+ N + + +KG G +FT+ D+ + + A++G S EDV +
Sbjct: 64 KIFIQSNPQFERLLAHVKGNIGFVFTSGDLKDIRDIIVANKVKAPARAGLYSPEDVYIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D V + + +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDIRVVEANTRVGASEATLLNMLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
F + Y+ + ++LD
Sbjct: 179 SPFTFGMTCVQVYDNGQIFSPSVLD 203
>gi|363754297|ref|XP_003647364.1| hypothetical protein Ecym_6159 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891001|gb|AET40547.1| hypothetical protein Ecym_6159 [Eremothecium cymbalariae
DBVPG#7215]
Length = 312
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 26 LRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED- 83
LRD L E+Y ++F+ V N+ + ++ +VR + + GKN ++ A+ D
Sbjct: 15 LRDYL----EEYKSVFIVGVDNVSSQQMHEVRKALRGRAVVLMGKNTMVRRAVRGLISDF 70
Query: 84 -EIEKNIHVVSSALKGQCGLLFTNRSKD---DVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ EK + V KG G +FTN DV++ V A+ G I+ ED+ ++
Sbjct: 71 PDYEKLLPFV----KGNVGFVFTNDPLSEIKDVIISNKVAAP---ARPGAIAPEDIWVR- 122
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
+EP + LG+ T + +G + + D V + G + +A +L LL
Sbjct: 123 ----AVNTGMEPGKTSFFQALGVPTKIARGTIEITSDVNVVQAGKKVGASEASLLNLLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ D+E
Sbjct: 179 SPFTYGLTVVQVYD----------NGQVFPSTILDITDEE 208
>gi|344231951|gb|EGV63830.1| ribosomal protein P0 [Candida tenuis ATCC 10573]
Length = 313
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 EKKAEYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRSDATVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
++ E EK + V KG G +FTN D+ D S ++
Sbjct: 66 FLAELPEYEKLLPFV----KGNVGFIFTNA---------DLKTIRDVVTSNVVAAPARAG 112
Query: 138 KEGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
P +P +EP + LG+ T + +G + + D V + + P +A +
Sbjct: 113 AVAPFDVWVPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEANQKVGPSEASL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
L +L + + + Y+ + + P DI D+ DDE
Sbjct: 173 LNMLNISPFTYGMTVVQVYD----------NGQVFPSDILDITDDE 208
>gi|67937663|gb|AAY83294.1| 60s acidic ribosomal protein-like [Babesia sp. WA1]
Length = 312
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 6/211 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K+ D+L V+ Y + V SV ++ + ++ VR+ + + GKN ++ L
Sbjct: 8 EKKRIYFDKLTNLVKSYPQVLVVSVDHVGSRQMAQVRHSLRGKAEILMGKNTLIRMVLNT 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
S D + + + ++ G +F +V A+ G I+ DV +
Sbjct: 68 SFADS--QAVRELVQCVRLNTGFVFCIADPMEVRKVILENRVPAPARQGVIAPCDVFISA 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P S + LG+ T + KG + + D + KKG+ +T A +L+ L KK
Sbjct: 126 GATGMDP-SQTSFFQALGISTKIVKGQIEIQNDVHLIKKGEKVTASSATLLQKLNKKPFA 184
Query: 200 FKVLLYLWYNKKEGTFENLLDREKTPMDIYD 230
+ + + +Y+ G N E T D+ D
Sbjct: 185 YGLKVEKFYD--NGAVCNAEVLETTEEDVID 213
>gi|342185308|emb|CCC94791.1| putative 60S acidic ribosomal subunit protein [Trypanosoma
congolense IL3000]
gi|342185309|emb|CCC94792.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 326
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
ED + +K H + + CG ++FTN ++ D + + A+ G I+
Sbjct: 66 RAEDSKATDSDKLFHQTCADKQLLCGNTSMIFTNEDVTEITKVLDGHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|41059964|emb|CAF18552.1| ribosomal phosphoprotein [Plasmodium falciparum]
Length = 308
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y+ I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTED 134
+ + +IEK + +V K G +F KDD+ ++ D A+ G I+ D
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFC---KDDLSEIRNIILDNKSPAPARLGVIAPID 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
V + GP P S + LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 121 VFIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQEHVPLIKQGEKVTASSATLLQ 176
>gi|147904649|ref|NP_001080134.1| ribosomal protein, large, P0 [Xenopus laevis]
gi|27503344|gb|AAH42268.1| Arbp-prov protein [Xenopus laevis]
Length = 315
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 96/221 (43%), Gaps = 16/221 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + S +KG G +FT +V + A++G I+ +V +
Sbjct: 70 ENNPALEKLL----SHIKGNVGFVFTKEDLTEVRDMLLANKVPASARAGAIAPCEVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDEN 236
+ +++ Y+ +LD + + + +E N
Sbjct: 181 SPFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRN 221
>gi|13365631|dbj|BAB39163.1| ribosomal P0 subunit protein [Trypanosoma congolense]
Length = 344
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
+ K++ D L + KY+ + + N+R+ ++ VR D + GK + + K
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHGVRRDLRGKGELVMGKKTLQKKIVEK 65
Query: 80 SQED----EIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
ED + +K H + + CG ++FTN ++ D + + A+ G I+
Sbjct: 66 RAEDSKATDSDKLFHQTCADKQLLCGNTSMIFTNEDVTEITKVLDGHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATAFFQALNIATKISKGTVEIVSDKKVLSTGDKVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|346464737|gb|AEO32213.1| hypothetical protein [Amblyomma maculatum]
Length = 263
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L +++Y+ + + N+ +++L+++R + DS GKN ++ +
Sbjct: 9 QKKVQYDKKLCSLLDQYSQVLIALADNVGSNQLQNIRKGLRGDSVVLMGKNTLIRRCIKL 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ N + L G GL+FT ++ Y+ A+ G ++ DV +
Sbjct: 69 HAENSGNANYLNLLPLLVGNVGLIFTKGDLKEISEEVAKYKVGAPARVGLVAPIDVIVPP 128
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
G ++P + L + T +NKG V + + KKGD + +A +L
Sbjct: 129 GN-----TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL 178
>gi|255513932|gb|EET90197.1| ribosomal protein L10 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 277
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDSR-FFFGKNKVMAYALGKSQEDEIEKNIHVV 92
++KY+++ V ++ + + L+ RN + S F G+ K++ L S+E + E H
Sbjct: 18 LKKYSSVGVVNLSGVPDRLLQSSRNKMRGSTTFIIGRKKMLEKILESSEETK-ELAQH-- 74
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
+ G ++ +N ++ F E + AK I+ +D+ ++ G P +
Sbjct: 75 ---MSGTSAIVLSNEDPFELYRRFKENEIKLAAKPRQIAPDDIVIESGETSLQPGQAVTE 131
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
L+ G+ ++KG V + K T+ +KG +++ A+ L L
Sbjct: 132 LKAAGIDVKIDKGKVVISKSKTLVEKGGIISQNLAKALHTL 172
>gi|213410301|ref|XP_002175920.1| 60S acidic ribosomal protein P0 [Schizosaccharomyces japonicus
yFS275]
gi|212003967|gb|EEB09627.1| 60S acidic ribosomal protein Rpp0 [Schizosaccharomyces japonicus
yFS275]
Length = 311
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+ KY ++FV + N+ + ++ VR + + + GKN ++ A+ S+ E+E+ +
Sbjct: 19 ISKYQSVFVVGIDNVSSQQMHTVRKELRGTAEILMGKNTMIRRAIRDVLSEVPELERLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V +G G +FTN +V A+ G I+ DV + G +E
Sbjct: 79 TV----RGNVGFVFTNADLKEVRESIVNNVVAAPARPGAIAPLDVFVPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + LG+ T + +G + + + + +K + P +A +L +L
Sbjct: 130 PGKTSFFQALGIPTKITRGTIEITSEVHLVEKNTKVGPSEATLLNML 176
>gi|399949642|gb|AFP65300.1| 60S acidic ribosomal protein P0 [Chroomonas mesostigmatica
CCMP1168]
Length = 312
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 16 VKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMA 74
+ L +K ++LV KY I + N+ +++++ R KD S GKN ++
Sbjct: 2 ITTPLVKKSLYFEKLVYLFSKYPRILIVQADNVGSNQIQKCRKSLKDNSILIMGKNSIIK 61
Query: 75 YALGKSQEDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGF 129
L K +IEKN + G GL+FT K D + +D A+ G
Sbjct: 62 KVLRK----QIEKNSSFEEFYTHTSGNVGLIFT---KLDPFQIQKILKDNKIPAAARIGQ 114
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
I+ DV + GP P + L + T + +G + + + +KG ++ +A +
Sbjct: 115 IAQHDVIIPAGPTEISPDGTS-FFQALNIPTKIQRGQIEILDPVKIIEKGKIVGSSEAAL 173
Query: 190 LKLL 193
LK L
Sbjct: 174 LKKL 177
>gi|315229959|ref|YP_004070395.1| LSU ribosomal protein P0 (L10p) [Thermococcus barophilus MP]
gi|315182987|gb|ADT83172.1| LSU ribosomal protein P0 (L10p) [Thermococcus barophilus MP]
Length = 339
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 1/164 (0%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+ L + ++ + + + V + L +R + +N ++ A+ K+ ++ +
Sbjct: 13 ERLAEIIKSHPVVALVDVAGVPAYPLSKMREKLRGKALLRVSRNTLIELAIKKAAKELGK 72
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + ++G +L T + + + + AK G DV + GP P P
Sbjct: 73 PELEKLVDYIQGGAAILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVVPAGPTPLSP 132
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ +++ LG+ + +G VT+ KD V K G+++TP+ A IL
Sbjct: 133 GPVVGEMQALGIPARIERGKVTIQKDTVVLKAGEIITPQLANIL 176
>gi|78190803|gb|ABB29723.1| ribosomal protein P0 large subunit [Monosiga brevicollis]
Length = 231
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 52 KLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKD 110
+++D+R + + GKN ++ AL D + H + +KG GLLFTN D
Sbjct: 3 QMQDIRAALRGNCELLMGKNTMVRRAL----LDHXNEIFHELLPHIKGNVGLLFTN---D 55
Query: 111 DVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVV 167
D + DV D A+ G I+ E + + GP + + L + T + KG +
Sbjct: 56 DFVAIRDVLLDHKVAAPARVGAIAPEPIIIPAGPTGQDAQKTS-FFQALNIPTKIAKGSI 114
Query: 168 TLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWY 208
+ + + ++G + P +A +L +L + +++ Y
Sbjct: 115 EIISEVRLLEEGGRVGPSEAALLNMLGISPFSYGLVVVQIY 155
>gi|22001927|sp|Q9DG68.1|RLA0_RANSY RecName: Full=60S acidic ribosomal protein P0; AltName: Full=60S
ribosomal protein L10E
gi|9957151|gb|AAG09233.1| brain acidic ribosomal phosphoprotein P0 [Rana sylvatica]
Length = 315
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 86/194 (44%), Gaps = 16/194 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT +V + A++G I+ DV +
Sbjct: 70 ENNSALEKLL----PHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCDVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLLYLWYN 209
F +++ Y+
Sbjct: 181 SPFSFGLIIQQVYD 194
>gi|39722357|emb|CAE84233.1| ribosomal phosphoprotein [Plasmodium falciparum]
gi|40555930|emb|CAF04072.1| ribosomal phosphoprotein [Plasmodium falciparum]
gi|40555932|emb|CAF04073.1| ribosomal phosphoprotein [Plasmodium falciparum]
gi|40555934|emb|CAF04074.1| ribosomal phosphoprotein [Plasmodium falciparum]
gi|41059966|emb|CAF18553.1| ribosomal phosphoprotein [Plasmodium falciparum]
Length = 308
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y+ I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTED 134
+ + +IEK + +V K G +F KDD+ ++ D A+ G I+ D
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFC---KDDLSEIRNIILDNKSPAPARLGVIAPID 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
V + GP P S + LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 121 VFIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQ 176
>gi|398397829|ref|XP_003852372.1| 60S acidic ribosomal protein P0 [Zymoseptoria tritici IPO323]
gi|339472253|gb|EGP87348.1| hypothetical protein MYCGRDRAFT_104664 [Zymoseptoria tritici
IPO323]
Length = 313
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ +V N+ + ++ ++R+ + DS GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRHSLRGDSVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNR----SKDDVL---MWFDVYEDEDFAKSGFIS 131
D E E+ + HV KG G +FTN ++D +L + FI
Sbjct: 68 PDSPEYERLLPHV-----KGNVGFVFTNSDLKETRDKILSNRVAAPARAGAVAPDDVFIP 122
Query: 132 TEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ ++ G F + LG+ T + +G + + D + + G + +A +L
Sbjct: 123 AGNTGMEPGKTSFF--------QALGVPTKIARGTIEITSDLKLVQAGSKVGASEATLLN 174
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFE-NLLDREKT 224
+L + + + Y++ + TFE ++LD E++
Sbjct: 175 MLNISPFTYGMGISQIYDEGQ-TFESSVLDIEES 207
>gi|340058365|emb|CCC52720.1| putative 60S acidic ribosomal subunit protein [Trypanosoma vivax
Y486]
Length = 325
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGK----NKVMAY 75
+ K++ D L + KY+ + + N+R+ ++ DVR D + GK K++
Sbjct: 6 QEKRDYEDRLNGCLTKYSRVLFCLMDNVRSQQVHDVRRDLRGKGELVMGKKTLQKKIVER 65
Query: 76 ALGKSQEDEIEKNIHVVSSALKGQCG---LLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
+ E +K H + + CG L+FTN + D + + A+ G I+
Sbjct: 66 RAEADKATEADKLFHETCTEKQLLCGNTSLIFTNEDVKVITDVLDKHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T ++KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATSFFQALNIATKISKGTVEIVSDKKVLSPGDRVDNSTAA 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|124486395|ref|YP_001031011.1| acidic ribosomal protein P0 [Methanocorpusculum labreanum Z]
gi|124363936|gb|ABN07744.1| LSU ribosomal protein L10P [Methanocorpusculum labreanum Z]
Length = 282
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGL 158
L+F N + + + + + AK+G I+ ED+ + GP P I +L+Q G+
Sbjct: 84 HSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDIVVPAGPTTFKPGPIVGELQQAGI 143
Query: 159 QTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL-KLLKKKMAKFKVLLYLWY 208
++ G V + + TV K G+ + +QA +L KL K M LL + Y
Sbjct: 144 PAAIDGGKVKIKETKTVVKAGEAINKKQADVLSKLGIKPMPVGLSLLAVCY 194
>gi|170047218|ref|XP_001851128.1| 60S acidic ribosomal protein P0 [Culex quinquefasciatus]
gi|167869698|gb|EDS33081.1| 60S acidic ribosomal protein P0 [Culex quinquefasciatus]
Length = 315
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KANYFVKIVQLLDEYPKCFIVGADNVGSRQMQTIRISLRGSAIVLMGKNTMMRKAIRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDV---LMWFDVYEDEDFAKSGFISTEDVELK 138
E+ N+ + ++G G +FT D+ LM V A++G I+ +V +
Sbjct: 70 ENN--SNLEKLLPHIRGNVGFVFTKGDLADIRDKLMESKVRAP---ARAGAIAPLEVII- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 178
>gi|124804377|ref|XP_001347984.1| 60S ribosomal protein P0 [Plasmodium falciparum 3D7]
gi|23496238|gb|AAN35897.1| 60S ribosomal protein P0 [Plasmodium falciparum 3D7]
Length = 316
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 14/177 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y+ I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTED 134
+ + +IEK + +V K G +F KDD+ ++ D A+ G I+ D
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFC---KDDLSEIRNIILDNKSPAPARLGVIAPID 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
V + GP P S + LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 121 VFIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQ 176
>gi|84490052|ref|YP_448284.1| acidic ribosomal protein P0 [Methanosphaera stadtmanae DSM 3091]
gi|121722876|sp|Q2NEW2.1|RLA0_METST RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|84373371|gb|ABC57641.1| 50S ribosomal protein L10P [Methanosphaera stadtmanae DSM 3091]
Length = 332
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Query: 40 IFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVVSSALKG 98
I + ++ ++ +L+ +R D+ + + AL S ++E+E ++ L+G
Sbjct: 25 IGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALENSDKEEVEG----LADYLEG 80
Query: 99 QCGLLFTNRSKDDVLMWFDVYED---EDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
Q ++FT K + F + ED E AK+G I+ D+ + G P I +L+Q
Sbjct: 81 QPAMVFT---KMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILGELQQ 137
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+G+ ++KG + + D + +G+ + A IL
Sbjct: 138 VGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADIL 172
>gi|126136945|ref|XP_001384996.1| 60S acidic ribosomal protein P0 [Scheffersomyces stipitis CBS 6054]
gi|126092218|gb|ABN66967.1| ribosomal protein P0 (A0) (L10E) [Scheffersomyces stipitis CBS
6054]
Length = 312
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 EKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDATVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAK--SGFISTEDV 135
D E EK + V KG G +FTN + DE + + V
Sbjct: 66 FLSDLPEFEKLLPYV----KGNVGFIFTNADLKTI-------RDEIVSNVVAAPARAGAV 114
Query: 136 ELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
K+ +P +EP + LG+ T + +G + + D V + + + P +A +L
Sbjct: 115 APKDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAENKVGPSEATLLN 174
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+L + + + Y+ + + P I D+ DDE
Sbjct: 175 MLNISPFTYGMTVVQVYD----------NGQVFPSSILDISDDE 208
>gi|45360787|ref|NP_989067.1| ribosomal protein, large, P0 [Xenopus (Silurana) tropicalis]
gi|38174040|gb|AAH61299.1| acidic ribosomal phosphoprotein P0 [Xenopus (Silurana) tropicalis]
Length = 314
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 97/224 (43%), Gaps = 16/224 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + S +KG G +FT +V + A++G I+ V +
Sbjct: 70 ENNPALEKLL----SHIKGNVGFVFTKEDLTEVRDMLLANKVPACARAGAIAPCGVVV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNSN 239
+ +++ Y+ +LD + + + +E N ++
Sbjct: 181 SPFSYGLIIQQVYDNGSIYSPEVLDITEEALHVRFLEGVRNVAS 224
>gi|440296166|gb|ELP89007.1| 60S acidic ribosomal protein P0, putative [Entamoeba invadens IP1]
Length = 318
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K ++Y I + V N+ +S+ + +R + + + F GKN ++ A+ E E +
Sbjct: 26 KYFDEYKEIVIVRVDNVGSSQFQIIRKELRSTCEFVMGKNTLIRKAI--KMEMEAHPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
++ +KG G +FT + + AK+G I+ DV + G P
Sbjct: 84 LLLEHIKGNVGFIFTKGDLHALKDKLAELKSPSPAKAGIIAPNDVIVPAGDTGLDPTQTS 143
Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
++ L +Q+ + KG + + + + K+G+ + QA +L+ LK ++ ++ Y+
Sbjct: 144 -FIQALNIQSKITKGQIEIIGNTLLIKEGEKVGVSQAVLLQKLKINPFRYGAVIDTIYD 201
>gi|227828026|ref|YP_002829806.1| acidic ribosomal protein P0 [Sulfolobus islandicus M.14.25]
gi|238620255|ref|YP_002915081.1| acidic ribosomal protein P0 [Sulfolobus islandicus M.16.4]
gi|259491690|sp|C4KIJ9.1|RLA0_SULIK RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|259491692|sp|C3MXH4.1|RLA0_SULIM RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|227459822|gb|ACP38508.1| ribosomal protein L10 [Sulfolobus islandicus M.14.25]
gi|238381325|gb|ACR42413.1| ribosomal protein L10 [Sulfolobus islandicus M.16.4]
Length = 338
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKN 88
EL + ++ N I + S++ KL ++R + KV L K N
Sbjct: 23 ELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAII----KVTKNTLFKIAAKNAGIN 78
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEFP 146
I + L G +FT + M+F+ Y+ +A G + E+V + G +P P
Sbjct: 79 IEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGP 138
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
I +L +QT + G V + KD V K GDV+ E IL+
Sbjct: 139 --ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQ 181
>gi|440297873|gb|ELP90514.1| 60S acidic ribosomal protein P0, putative [Entamoeba invadens IP1]
Length = 318
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 4/179 (2%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K ++Y I + V N+ +S+ + +R + + + F GKN ++ A+ E E +
Sbjct: 26 KYFDEYKEIVIVRVDNVGSSQFQVIRKELRSTCEFVMGKNTLIRKAI--KMEMEAHPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
++ +KG G +FT + + AK+G I+ DV + G P
Sbjct: 84 LLLEHIKGNVGFIFTKGDLHALKDKLAELKSPSPAKAGIIAPNDVIVPAGDTGLDPTQTS 143
Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
++ L +Q+ + KG + + + + K+G+ + QA +L+ LK ++ ++ Y+
Sbjct: 144 -FIQALNIQSKITKGQIEIIGNTLLIKEGEKVGVSQAVLLQKLKINPFRYGAVIDTIYD 201
>gi|322706978|gb|EFY98557.1| 60S acidic ribosomal protein P0 [Metarhizium anisopliae ARSEF 23]
Length = 313
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y ++F+ S+ N+ + ++ +VR+ + D GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYRSVFIVSIDNVSSQQMHEVRHSLRGDGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ A++G ++ DV +
Sbjct: 68 NDTPEYERLLPFV----KGNVGFVFTNGDLKDIRDKLLANRVAAPARAGAVAPVDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + + G+ + P +A +L ++
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGNKVGPSEATLLNMMNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ + + Y++ + +LD
Sbjct: 179 SPFTYGLGIEQVYDQGQAFPAEILD 203
>gi|123489652|ref|XP_001325439.1| ribosomal protein L10 [Trichomonas vaginalis G3]
gi|121908338|gb|EAY13216.1| ribosomal protein L10, putative [Trichomonas vaginalis G3]
Length = 235
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 37 YNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95
YN + V + Q +++++L +R D + F KN +M A+ D++++ I ++
Sbjct: 25 YNKVAVVTSQQVKSNQLMKIRTDISSFAEIVFCKNSLMRRAV-----DQLKREIPSITEL 79
Query: 96 ---LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
L GL+FTN S + D AK+G I+ DV +K L P+
Sbjct: 80 EKYLTNGAGLIFTNGSFKAIKEVIDANCRYSAAKAGSIAPCDVIIKR-QLTSIPYYEYNL 138
Query: 153 LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L + + KG + + + KG + +AR+L++L K K + + + Y+
Sbjct: 139 FFDLQIPCKIFKGTIEVAGKKQLVWKGQKIRASEARVLEMLGIKPFKHTLKIEVLYD 195
>gi|22759727|dbj|BAC10912.1| putative 60S acidic ribosomal protein P0 [Zinnia elegans]
Length = 203
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L + ++ YN + V + N+ +++L+++R + DS GKN +M ++ E K
Sbjct: 16 KLCQLLDDYNQVLVAAADNVGSNQLQNIRQGLRGDSVILMGKNTMMKRSIRMHSEKTGNK 75
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
+ L G GL+FT +V Y+ A+ G ++ DV + G P
Sbjct: 76 AYLNLIPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDP- 134
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
S + L + T +NKG V + + KKGD + +A +L
Sbjct: 135 SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALL 177
>gi|308810998|ref|XP_003082807.1| RLA0_MAIZE 60S acidic ribosomal protein P0 pir||T03944 acidic
ribosomal protein P0-maize (ISS) [Ostreococcus tauri]
gi|116054685|emb|CAL56762.1| RLA0_MAIZE 60S acidic ribosomal protein P0 pir||T03944 acidic
ribosomal protein P0-maize (ISS) [Ostreococcus tauri]
Length = 321
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 78/188 (41%), Gaps = 20/188 (10%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRN--------DWK---DSRFFFGKN 70
+KQ +++ ++ Y+ + N+ + + D+R W DS GKN
Sbjct: 5 KKQTYAEKVNFLLDNYDTALLVGADNVGSRQFMDIRAVRVADDAKRWSIRGDSVVLMGKN 64
Query: 71 KVMAYALGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFI 130
+M + + + ++++ L G G++FT +V + A+ G I
Sbjct: 65 TLMRKCISNYAKKSGNDSWNILAEKLVGNVGIIFTKGDLLEVRKKVKQFVVPAPARVGAI 124
Query: 131 STEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQ 186
+ +V + GP +EP + L + T +NKG + + D V K GD ++
Sbjct: 125 APVEVVVPAGP-----TGMEPSQTSFFQTLNIATKINKGSIEILNDIVVLKVGDRVSSSA 179
Query: 187 ARILKLLK 194
A +L +K
Sbjct: 180 AALLSKMK 187
>gi|31208765|ref|XP_313349.1| AGAP003592-PA [Anopheles gambiae str. PEST]
gi|347970187|ref|XP_003436533.1| AGAP003592-PB [Anopheles gambiae str. PEST]
gi|30176940|gb|EAA08855.2| AGAP003592-PA [Anopheles gambiae str. PEST]
gi|333468816|gb|EGK97075.1| AGAP003592-PB [Anopheles gambiae str. PEST]
Length = 314
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFLKVVQLLDEYPRCFIVGADNVGSRQMQTIRMSLRGSAIVLMGKNTMMRKAIRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELK 138
E+ +N+ + + +KG G +FT K D+ D + A++G I+ +V +
Sbjct: 70 ENN--QNLEKLLNHIKGNVGFVFT---KGDLAEIRDKLTESKVRAPARAGAIAPLEVVI- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 178
>gi|388498264|gb|AFK37198.1| unknown [Lotus japonicus]
Length = 312
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALG 78
LERK+ ++L ++ Y I + N+ ++ ++ +R + + GKN ++ +
Sbjct: 4 LERKEEYLNKLKDLLDTYTKILLVRADNVGSNHMQSIRRTLRGKAVVLMGKNTMIRKGIR 63
Query: 79 KSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
+ + + E + + LKG GL+FTN +V + AK+G IS +V
Sbjct: 64 ANLDAKPE--LEAIIPFLKGNVGLVFTNGDLAEVRKNVEGLRVSA-AKAGAISPVEVI-- 118
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+P+ +EP L+ L + T +NKG + + D + G + +A +L+ LK
Sbjct: 119 ---IPKGDTGLEPTQTAFLQALNIATKINKGQIQILDDKLLLTVGQKVGNSEAALLQKLK 175
>gi|367044004|ref|XP_003652382.1| 60S acidic ribosomal protein P0 [Thielavia terrestris NRRL 8126]
gi|346999644|gb|AEO66046.1| hypothetical protein THITE_2077551 [Thielavia terrestris NRRL 8126]
Length = 313
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IFV SV N+ + ++ ++R + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYRSIFVVSVDNVSSQQMHEIRQSLRGQGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ E D + ++
Sbjct: 68 ADTPEYERLLPFV----KGNVGFVFTNA---------DLKEVRDKILANKVAAPARAGAI 114
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P +EP + LG+ T + +G + + D + + G + P +A +L
Sbjct: 115 APVDVWVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGGKVGPSEATLLN 174
Query: 192 LL 193
+L
Sbjct: 175 ML 176
>gi|156098803|ref|XP_001615417.1| 60S acidic ribosomal protein P0 [Plasmodium vivax Sal-1]
gi|148804291|gb|EDL45690.1| 60S acidic ribosomal protein P0, putative [Plasmodium vivax]
Length = 315
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 8/174 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQIYIEKLSSLIQQYTKILIVHVDNVGSNQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + +IEK + +V K G +F +V + A+ G I+ DV +
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVFCKEDLTEVRNIILQNKSPAPARLGVIAPIDVFI 123
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
GP P S + LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 124 PPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQ 176
>gi|146422123|ref|XP_001487003.1| hypothetical protein PGUG_00379 [Meyerozyma guilliermondii ATCC
6260]
gi|146388124|gb|EDK36282.1| hypothetical protein PGUG_00379 [Meyerozyma guilliermondii ATCC
6260]
Length = 310
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 26/209 (12%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQED--EIEKNIH 90
+E Y +IFV V N+ + ++ ++R + + GKN ++ AL D + EK +
Sbjct: 19 LETYQSIFVVGVDNVSSQQMHEIRRALRGEGVVLMGKNTMVRRALRGFLADLPDFEKLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FTN V AK+G ++ DV + G +E
Sbjct: 79 FV----KGNVGFIFTNSDLKSVRDTITSNVVAAPAKAGAVAPADVWIPAGN-----TGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V +K + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVVQ 189
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMEDDE 235
Y+K + P I D+ DDE
Sbjct: 190 VYDKG----------QVFPATILDITDDE 208
>gi|68471065|ref|XP_720309.1| likely cytosolic ribosomal acidic protein P0 [Candida albicans
SC5314]
gi|77022572|ref|XP_888730.1| hypothetical protein CaO19_7015 [Candida albicans SC5314]
gi|46442171|gb|EAL01462.1| likely cytosolic ribosomal acidic protein P0 [Candida albicans
SC5314]
gi|76573543|dbj|BAE44627.1| hypothetical protein [Candida albicans]
Length = 312
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 98/225 (43%), Gaps = 32/225 (14%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 EKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTED 134
S+ E EK + + KG G +FTN +S D+++ +
Sbjct: 66 FLSELPEFEKLLPFI----KGNVGFIFTNGDLKSIRDIVV--------SNVVAAPARAGA 113
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V K+ +P +EP + LG+ T + +G + + D V ++ + P +A +L
Sbjct: 114 VAPKDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+L + + + Y+ + + P I D+ DDE
Sbjct: 174 NMLNISPFTYGMSVVQVYD----------NGQVFPSSILDITDDE 208
>gi|365986242|ref|XP_003669953.1| ribosomal protein P0 [Naumovozyma dairenensis CBS 421]
gi|343768722|emb|CCD24710.1| hypothetical protein NDAI_0D03960 [Naumovozyma dairenensis CBS 421]
Length = 312
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L +E+Y +IF+ V N+ + ++ +VR + + GKN ++ A+
Sbjct: 6 EKKVEYFAKLRSYLEEYKSIFIVGVDNVSSQQMHEVRKELRGRGVVLMGKNTMVRTAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + EK + + KG G +FTN S D+ + A++G I+ ED+ +
Sbjct: 66 LIGESSDFEKLLPFI----KGNVGFVFTNASLQDIKEVIISNKVAAPARAGAIAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGQKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ F + + Y+ + + P I D+ DDE
Sbjct: 177 EISPFSFGLSIVQVYD----------NGQIFPSSILDITDDE 208
>gi|167388336|ref|XP_001733424.1| 60S acidic ribosomal protein P0 [Entamoeba dispar SAW760]
gi|165898193|gb|EDR25126.1| 60S acidic ribosomal protein P0, putative [Entamoeba dispar SAW760]
Length = 354
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K +E+Y + V N+ +S+ + +R + + + F GKN ++ A+ + E + +
Sbjct: 26 KLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAI--KNQAETQPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ +KG G +FT + + AK+G I+ DV +P ++
Sbjct: 84 ELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDV-----IVPAGDTGLD 138
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P ++ L + + + KG + + + + K+G+ + QA +L+ LK K+ ++ +
Sbjct: 139 PTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDV 198
Query: 207 WYN 209
Y+
Sbjct: 199 VYD 201
>gi|389583844|dbj|GAB66578.1| 60S acidic ribosomal protein P0, partial [Plasmodium cynomolgi
strain B]
Length = 311
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++KQ ++L +++Y I + V N+ ++++ VR + + GKN + AL K
Sbjct: 8 QKKQIYIEKLSSLIQQYTKILIVHVDNVGSNQMASVRQSLRGKATILMGKNTRIRTALKK 67
Query: 80 SQE--DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVY---EDEDFAKSGFISTED 134
+ + +IEK + +V K G +F KDD+ ++ + A+ G I+ D
Sbjct: 68 NLQAVPQIEKLLPLV----KLNMGFVF---CKDDLTEVRNIILQNKSPAPARLGVIAPID 120
Query: 135 VELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
V + GP P S + LG+ T + KG + + + + K+G+ +T A +L+
Sbjct: 121 VFIPPGPTGMDP-SHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQ 176
>gi|367019862|ref|XP_003659216.1| hypothetical protein MYCTH_2295945 [Myceliophthora thermophila ATCC
42464]
gi|347006483|gb|AEO53971.1| hypothetical protein MYCTH_2295945 [Myceliophthora thermophila ATCC
42464]
Length = 311
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSR-FFFGKNKVMAYALGKSQ 81
K D+L +E+Y++IF+ SV N+ + ++ ++R + + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYHSIFIVSVDNVSSQQMHEIRQALRGTGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ E D + ++
Sbjct: 68 ADAPEYERLLPFV----KGNIGFVFTNG---------DLKEVRDKILANKVAAPARAGAI 114
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P +EP + LG+ T + +G + + D + + G + P +A +L
Sbjct: 115 APVDVWVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITSDLKLVEAGAKVGPSEATLLN 174
Query: 192 LL 193
+L
Sbjct: 175 ML 176
>gi|354544315|emb|CCE41038.1| hypothetical protein CPAR2_300270 [Candida parapsilosis]
Length = 312
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+E+Y +IF+ V N+ + ++ ++R + D+ GKN ++ A+ S+ + EK +
Sbjct: 19 LEEYKSIFIVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRGFLSELPDYEKLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FTN + AK+G ++ DV + G +E
Sbjct: 79 FV----KGNVGFIFTNADLKTIRDTITSNVVAAPAKAGAVAPADVYIPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V +K + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVVQ 189
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMEDDE 235
Y+ + + P I D+ DDE
Sbjct: 190 VYD----------NGQVFPASILDITDDE 208
>gi|164654992|ref|XP_001728628.1| hypothetical protein MGL_4227 [Malassezia globosa CBS 7966]
gi|159102509|gb|EDP41414.1| hypothetical protein MGL_4227 [Malassezia globosa CBS 7966]
Length = 314
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK-- 79
K+N L + ++ +IFV +V N+ + ++ +R + + GKN ++ AL +
Sbjct: 8 KENWFSRLNELIDTNTSIFVVNVDNVSSQQMHQIRQALRGQATVLMGKNTMVRRALRQVI 67
Query: 80 SQEDEIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
S+ E E+ + HV +G G +FT+ +V A++G S D+ +
Sbjct: 68 SERPEFERLMPHV-----RGNVGFVFTSADLKEVRDKVIENRVAAPARAGAYSPVDIFVP 122
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D V + G+ ++P ++ +L LL
Sbjct: 123 AG-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNRVSPSESALLNLL 176
>gi|157674443|gb|ABV60317.1| 60S acidic ribosomal protein P0-like protein [Lutzomyia
longipalpis]
Length = 317
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++V+ ++Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KANYFVKVVQLFDEYPKCFIVGADNVGSRQMQTIRTSLRGLAVVLMGKNTMMRKAIRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+ N+ + ++G G +FT ++V + A++G I+ +V +
Sbjct: 70 ENN--ANLEKLLPHIRGNVGFVFTKGDLNEVRDKLTESKVRAPARAGAIAPLEVII---- 123
Query: 142 LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 -PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEAALLNMLNISP 182
Query: 198 AKFKVLLYLWYNKKEGTFENLLD 220
++ +L+ Y+ +LD
Sbjct: 183 FQYGLLIEQVYDSGSIFSPEILD 205
>gi|328772745|gb|EGF82783.1| hypothetical protein BATDEDRAFT_15859 [Batrachochytrium
dendrobatidis JAM81]
Length = 317
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 87/183 (47%), Gaps = 24/183 (13%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS 80
+K+N +L + + Y+ +F+ +V N+ ++++ +R + + GKN ++ AL +
Sbjct: 9 KKENYFTKLNELLTDYSTVFIVNVDNVGSNQMHQIRKSLRGKAVVLMGKNTMVRRALRNA 68
Query: 81 --QEDEIEKNIHVVSSALKGQCGLLFTNRS----KDDVLMWFDVYEDEDFAKSGFISTED 134
+ + EK + +V +G G +FT +DD+L + AK+G ++ +
Sbjct: 69 LPENPQFEKLLALV----RGNIGFVFTKNDLKDIRDDILS----NRVQAPAKAGAVAPVN 120
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V + G +EP + +G+ T + +G + + D + G+ + +A++L
Sbjct: 121 VTVPAG-----NTGMEPGKTSFFQAIGIATKIARGTIEIISDVEIITAGNRVGASEAQLL 175
Query: 191 KLL 193
+L
Sbjct: 176 NML 178
>gi|297728767|ref|NP_001176747.1| Os12g0105325 [Oryza sativa Japonica Group]
gi|255669961|dbj|BAH95475.1| Os12g0105325 [Oryza sativa Japonica Group]
Length = 77
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 162 LNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
++ G V L DH VC++G ++PE A+ L+LL +MA F++ L
Sbjct: 8 VDAGAVELVADHIVCEEGKPISPEAAQTLRLLGMQMATFRLYL 50
>gi|18253041|gb|AAL62465.1| 60S acidic ribosomal protein P0 [Spodoptera frugiperda]
Length = 315
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ +++++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFIVGADNVGSTQMQQIRISLRGHSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+D +E N + + +KG G +FT DV + A+ G I+ V +
Sbjct: 66 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVRAPARPGAIAPLSVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 178
>gi|67466385|ref|XP_649340.1| 60S acidic ribosomal protein P0 [Entamoeba histolytica HM-1:IMSS]
gi|67481167|ref|XP_655933.1| 60S acidic ribosomal protein P0 [Entamoeba histolytica HM-1:IMSS]
gi|67484722|ref|XP_657581.1| 60S acidic ribosomal protein P0 [Entamoeba histolytica HM-1:IMSS]
gi|183231397|ref|XP_001913560.1| 60S acidic ribosomal protein P0 [Entamoeba histolytica HM-1:IMSS]
gi|56465756|gb|EAL43952.1| 60S acidic ribosomal protein P0, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56473101|gb|EAL50547.1| 60S acidic ribosomal protein P0, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474812|gb|EAL52168.1| 60S acidic ribosomal protein P0, putative [Entamoeba histolytica
HM-1:IMSS]
gi|169802508|gb|EDS89665.1| 60S acidic ribosomal protein P0, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449707377|gb|EMD47051.1| 60S acidic ribosomal protein P0 [Entamoeba histolytica KU27]
Length = 316
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K +E+Y + V N+ +S+ + +R + + + F GKN ++ A+ + E + +
Sbjct: 26 KLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAI--KNQAETQPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ +KG G +FT + + AK+G I+ DV + G ++
Sbjct: 84 ELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGD-----TGLD 138
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P ++ L + + + KG + + + + K+G+ + QA +L+ LK K+ ++ +
Sbjct: 139 PTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDV 198
Query: 207 WYN 209
Y+
Sbjct: 199 VYD 201
>gi|167377320|ref|XP_001734355.1| 60S acidic ribosomal protein P0 [Entamoeba dispar SAW760]
gi|167387247|ref|XP_001738080.1| 60S acidic ribosomal protein P0 [Entamoeba dispar SAW760]
gi|165898826|gb|EDR25590.1| 60S acidic ribosomal protein P0, putative [Entamoeba dispar SAW760]
gi|165904174|gb|EDR29494.1| 60S acidic ribosomal protein P0, putative [Entamoeba dispar SAW760]
Length = 316
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K +E+Y + V N+ +S+ + +R + + + F GKN ++ A+ + E + +
Sbjct: 26 KLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAI--KNQAETQPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ +KG G +FT + + AK+G I+ DV + G ++
Sbjct: 84 ELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGD-----TGLD 138
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P ++ L + + + KG + + + + K+G+ + QA +L+ LK K+ ++ +
Sbjct: 139 PTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDV 198
Query: 207 WYN 209
Y+
Sbjct: 199 VYD 201
>gi|167394192|ref|XP_001740880.1| 60S acidic ribosomal protein P0 [Entamoeba dispar SAW760]
gi|165894835|gb|EDR22691.1| 60S acidic ribosomal protein P0, putative [Entamoeba dispar SAW760]
Length = 316
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDS-RFFFGKNKVMAYALGKSQEDEIEKNIH 90
K +E+Y + V N+ +S+ + +R + + + F GKN ++ A+ + E + +
Sbjct: 26 KLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTLIRKAI--KNQAETQPELE 83
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ +KG G +FT + + AK+G I+ DV + G ++
Sbjct: 84 ELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGD-----TGLD 138
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P ++ L + + + KG + + + + K+G+ + QA +L+ LK K+ ++ +
Sbjct: 139 PTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDV 198
Query: 207 WYN 209
Y+
Sbjct: 199 VYD 201
>gi|448705723|ref|ZP_21700861.1| acidic ribosomal protein P0 [Halobiforma nitratireducens JCM 10879]
gi|445795203|gb|EMA45733.1| acidic ribosomal protein P0 [Halobiforma nitratireducens JCM 10879]
Length = 345
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
KQ DEL + + +Y ++ + + + + +L+D+R D + +N + AL ++
Sbjct: 16 KQEEVDELSELLGEYESVGIVGLTGIPSKQLQDMRRDLHGTAELRVSRNTLQIRALEEAG 75
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDV 135
+++ S ++G GL+ TN + F +Y++ + +K+ G ++ D+
Sbjct: 76 YEDL-------VSHVEGHVGLIATNDNP------FALYKELEASKTPAPINEGEVAPNDI 122
Query: 136 ELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ EG P +L+ +G + G + + +D TV + G+ ++ + A +L L
Sbjct: 123 VIPEGDTGVDPGPFVGELQGVGANARIEDGSIQVMEDSTVLEAGEEVSVDLANVLNEL 180
>gi|452979862|gb|EME79624.1| hypothetical protein MYCFIDRAFT_51867 [Pseudocercospora fijiensis
CIRAD86]
Length = 315
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ +V N+ + ++ ++R + + GKN ++ AL Q
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRQSMRGEGVVLMGKNTMVRRALKTFQ 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTN----RSKDDVLMWFDVYEDEDFAKSGFISTED 134
D E E+ + HV +G G +FTN +++ +L A + D
Sbjct: 68 ADFPEYERLLPHV-----RGNVGFVFTNADLKATREKILSNRVAAPARAGAV----APAD 118
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V + G +EP + LG+ T + +G + + D + + G+ + P +A +L
Sbjct: 119 VYVPAG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGNKVGPSEATLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
+L + + + Y++ + ++LD E++
Sbjct: 174 NMLNISPFTYGMGIAQIYDQGQTFDSSVLDIEES 207
>gi|403360440|gb|EJY79897.1| Acidic ribosomal protein P0 [Oxytricha trifallax]
Length = 335
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 20/198 (10%)
Query: 37 YNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALG----KSQEDEIE---- 86
Y+ + V N+ + ++ +R + +++ GKN +M AL K +E +++
Sbjct: 30 YSKAILVDVDNVSSKQINQIRLKLRPLNAKMIMGKNTLMKAALNHKMKKPEETDVDYETR 89
Query: 87 -------KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ + + LKG G++F+N D+ D E AK G ++ +DV ++
Sbjct: 90 KDSWKECDELDKIVTLLKGNTGIIFSNGDLSDIKKVLDDQSREAPAKVGAVAPDDVWIRA 149
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P +QL + T + K + + D + G + A +L LK +
Sbjct: 150 GSTGLDPKQTS-FFQQLSISTKIVKTQIDIVADKKIITSGQKIEATHAALLDKLKIRPFS 208
Query: 200 FKVLLYLWYNKKEGTFEN 217
+K+ + Y ++GT N
Sbjct: 209 YKMHVKKVY--EDGTIFN 224
>gi|403215637|emb|CCK70136.1| hypothetical protein KNAG_0D03900 [Kazachstania naganishii CBS
8797]
Length = 313
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ +VR + + GKN ++ A+
Sbjct: 6 EKKVEYFAKLREYLEEYKSIFVVGVDNVSSQQMHEVRKALRGEGVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V +G G +FTN S D+ + A++G ++ ED+ +
Sbjct: 66 FLSDLPDYEKLLPFV----RGNVGFIFTNASLKDIKDVIVANKVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V + G + P +A +L +L
Sbjct: 122 T-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGTRVGPSEATLLNML 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTYGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|193875762|gb|ACF24517.1| 60S ribosomal protein L10 [Gymnochlora stellata]
Length = 252
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
+ ++ + +Y I F ++N+++ ++ DVR ++ + GK ++ Y L
Sbjct: 3 SKFLEMIPRYRFIIFFKLKNIKSKQIHDVRKFLRNRAEIIVGKKTLLRYYLNNIDGKIST 62
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ +++ LK GLLFTN + Y ++ AK+G ++ +D+++K+G P
Sbjct: 63 SKVRQLTANLKNNVGLLFTNTDPYCINSLLKNYCVKETAKAGTLAKKDIKIKKGIKRLSP 122
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKF 200
S + LG+ T + KG + + ++ + KK V+ +LK L + K+
Sbjct: 123 -SQTSFFQALGIPTRVTKGSIEILENILLVKKNKVINSSHEVLLKKLNIRPFKY 175
>gi|119496769|ref|XP_001265158.1| 60S acidic ribosomal protein P0 [Neosartorya fischeri NRRL 181]
gi|119413320|gb|EAW23261.1| 60S acidic ribosomal protein P0 [Neosartorya fischeri NRRL 181]
Length = 313
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--E 84
D+L +++YN +F+ V N+ + ++ ++R + + GKN ++ A+ D E
Sbjct: 13 DKLKSLLDEYNTVFIVGVDNVSSQQMHEIRVALRGQAVVLMGKNTMVRRAIKGFVTDNPE 72
Query: 85 IEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
E+ + HV KG G +FTN DV A++G ++ DV + G
Sbjct: 73 YERLLPHV-----KGNVGFIFTNGDLKDVKTKILANRVAAPARAGAVAPADVWIPAG--- 124
Query: 144 EFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
+EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 125 --NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFT 182
Query: 200 FKVLLYLWYNKKEGTFENLLDREKT 224
+ + + Y+ + ++LD E++
Sbjct: 183 YGMTIAQVYDNGQCFPAHVLDIEES 207
>gi|189503066|gb|ACE06914.1| unknown [Schistosoma japonicum]
gi|226469644|emb|CAX76652.1| deoxyribonuclease [Schistosoma japonicum]
gi|226469648|emb|CAX76654.1| deoxyribonuclease [Schistosoma japonicum]
gi|226469650|emb|CAX76655.1| deoxyribonuclease [Schistosoma japonicum]
gi|226472992|emb|CAX71182.1| deoxyribonuclease [Schistosoma japonicum]
gi|226472994|emb|CAX71183.1| deoxyribonuclease [Schistosoma japonicum]
Length = 317
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|50344450|emb|CAH04311.1| acidic p0 ribosomal protein [Biphyllus lunatus]
Length = 317
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +L++ +E+Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFTKLIQLLEEYPKCFIVGADNVGSKQMQQIRISLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+ IE+N + + +KG G +FT + D++ D + A++G I+ V
Sbjct: 66 KGHIERNPCLEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARNGAIAPLPVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PARNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|226473000|emb|CAX71186.1| deoxyribonuclease [Schistosoma japonicum]
Length = 317
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|302414632|ref|XP_003005148.1| 60S acidic ribosomal protein P0 [Verticillium albo-atrum VaMs.102]
gi|261356217|gb|EEY18645.1| 60S acidic ribosomal protein P0 [Verticillium albo-atrum VaMs.102]
Length = 313
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 28/221 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+YN+IF+ +V N+ + ++ VR+ + D+ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYNSIFIVTVDNVSSQQMHQVRHSLRGDAVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
D E E+ + HV KG G +FTN D+ + A++G ++ DV +
Sbjct: 68 ADSPEYERLLPHV-----KGNVGFVFTNGDLKDIRDKVLANKVAAPARAGAVAPSDVWIP 122
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
G +EP + LG+ T + +G + + D + + + +A +L LL
Sbjct: 123 AG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEANSKVGASEASLLNLLN 177
Query: 195 KKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ + TF P D+ D+ +++
Sbjct: 178 ISPFTYGLGIAQVYDQGQ-TF---------PADVLDIGEEQ 208
>gi|226472996|emb|CAX71184.1| deoxyribonuclease [Schistosoma japonicum]
Length = 317
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|400602946|gb|EJP70544.1| 60S acidic ribosomal protein P0 [Beauveria bassiana ARSEF 2860]
Length = 331
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ + N+ + ++ ++R+ + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVEIDNVTSQQMHEIRHSLRGKGVVLMGKNTMVRRALKGFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ E D S ++
Sbjct: 68 NDTPEYERLLPYV----KGNVGFVFTND---------DLKEIRDIVLSNRVAAPARAGAL 114
Query: 140 GPL----PEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P+ P +EP + L + T + +G + + D + +KG + P +A +L
Sbjct: 115 APIDVWVPAGNTGMEPGKTSFFQALNVPTKIARGTIEITTDLKLVEKGLKVGPSEATLLN 174
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+L F + + Y++ + ++LD
Sbjct: 175 MLNISPFTFGMGIAQVYDQGQCFDASVLD 203
>gi|448537151|ref|XP_003871276.1| Rpp0 ribosomal protein [Candida orthopsilosis Co 90-125]
gi|380355633|emb|CCG25151.1| Rpp0 ribosomal protein [Candida orthopsilosis]
Length = 312
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 26/209 (12%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+E+Y +IF+ V N+ + ++ ++R + D+ GKN ++ A+ S+ + EK +
Sbjct: 19 LEEYKSIFIVGVDNVSSQQMHEIRKALRDDAVVLMGKNTMVRRAIRGFLSELPDYEKLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FTN + AK+G ++ DV + G +E
Sbjct: 79 FV----KGNVGFIFTNADLKTIRDTITSNVVAAPAKAGAVAPADVYIPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V +K + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDGKVGPSEATLLNMLNISPFTYGLTVVQ 189
Query: 207 WYNKKEGTFENLLDREKTPMDIYDMEDDE 235
Y+ + + P I D+ DDE
Sbjct: 190 VYD----------NGQVFPASILDITDDE 208
>gi|157127511|ref|XP_001655016.1| 60S acidic ribosomal protein P0 [Aedes aegypti]
gi|94468758|gb|ABF18228.1| ribosomal protein P0 [Aedes aegypti]
gi|108872941|gb|EAT37166.1| AAEL010821-PA [Aedes aegypti]
Length = 315
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KANYFVKIVQLLDEYPKCFIVGADNVGSRQMQTIRISLRGTAVVLMGKNTMMRKAIRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELK 138
E+ N+ + +KG G +FT K D++ D + A++G I+ +V +
Sbjct: 70 EEN--SNLEKLLPHIKGNVGFVFT---KGDLVEVRDKLMESKVRAPARAGAIAPLEVVI- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 178
>gi|7674331|sp|Q9Y8J3.1|RLA0_METVO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|4894939|gb|AAD32665.1|AF139164_2 ribosomal protein L10 [Methanococcus voltae]
Length = 297
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 38 NNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVVSSAL 96
N I + + + + +L+++R+ +DS +N +M A+ + E+ + + +
Sbjct: 29 NVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPSFTKLIDCM 88
Query: 97 KGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQL 156
+ L+ T + + + + K+G + D+E+K G P +L+ +
Sbjct: 89 EKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGPFLSELKAV 148
Query: 157 GLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
GL + KG + + +D V K+GDV++ + A +L
Sbjct: 149 GLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVL 182
>gi|226469654|emb|CAX76657.1| deoxyribonuclease [Schistosoma japonicum]
Length = 276
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEK 87
+L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K +
Sbjct: 16 KLEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--S 73
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
N+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 74 NLEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNT 128
Query: 148 SIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 129 GLGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|449299432|gb|EMC95446.1| hypothetical protein BAUCODRAFT_578183 [Baudoinia compniacensis
UAMH 10762]
Length = 322
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 26/213 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ +V N+ + ++ ++R+ + GKN ++ A+ Q
Sbjct: 8 KAGYFDKLKGLLEDYKSIFIVTVDNVSSQQMHEIRHAMRGKGVVLMGKNTMVRRAIKTFQ 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
D E E+ + HV KG G +FTN D+ E + S I+
Sbjct: 68 NDNPEYERLLPHV-----KGNVGFVFTNA---------DLKETREQILSNRIAAPARAGA 113
Query: 139 EGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
P +P +EP + LG+ T + +G + + D + + G + +A +L
Sbjct: 114 VAPQDVFIPAGNTGMEPGKTSFFQALGVPTKIARGTIEITADLKIVEGGSKVGASEATLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREK 223
+L + + + Y+ ++LD E+
Sbjct: 174 NMLNISPFTYGMGIAQIYDGGMTFLPSVLDIEE 206
>gi|14579678|gb|AAK69358.1|AF390866_1 ribosomal phosphoprotein P0 [Toxoplasma gondii]
Length = 314
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++++ L +EKY + V ++ + ++ D+R + + GKN ++ AL +
Sbjct: 9 DKRKTYFSRLFALLEKYPRVLVVEADHVGSKQMADIRLALRGKAVVLMGKNTMIRTALKQ 68
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ ++EK + +V + G +F +V + A+ G + DV +
Sbjct: 69 KMSEMPQLEKLLPLV----RLNVGFIFCIEDPAEVRRIVAENKVPAPARQGVFAPIDVFI 124
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
GP P S + LG+ T + KG++ + + + K+GD +T A +L+ L K
Sbjct: 125 PAGPTGMDPGSTS-FFQALGIATKIVKGIIEIQNEVHLIKEGDKVTASAATLLQKLNIKP 183
Query: 198 AKFKVLLYLWYN 209
++ + + Y+
Sbjct: 184 FEYGLAIQHVYD 195
>gi|448083996|ref|XP_004195495.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
gi|359376917|emb|CCE85300.1| Piso0_004886 [Millerozyma farinosa CBS 7064]
Length = 309
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 34/213 (15%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+E+Y +IF+ V N+ + ++ ++R + ++ GKN ++ A+ S+ E EK +
Sbjct: 19 LEEYKSIFIVGVDNVSSQQMHEIRKALRGEATVLMGKNTMVRRAIRGFLSELPEYEKLLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEFP 146
V +G G +FTN D+ D S ++ P +P
Sbjct: 79 FV----RGNVGFIFTNG---------DLKSIRDVVVSNVVAAPARAGAIAPKDVWIPAGN 125
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V + + P +A +L +L + +
Sbjct: 126 TGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVETDTRVGPSEATLLNMLNISPFTYGM 185
Query: 203 LLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ Y+ + + P I D+ D+E
Sbjct: 186 SVIQVYD----------NAQVFPASILDITDEE 208
>gi|50344448|emb|CAH04310.1| acidic p0 ribosomal protein [Dascillus cervinus]
Length = 318
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +L++ +E + F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFTKLIQLLEDFPKCFIVGADNVGSKQMQQIRMSLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDV---LMWFDVYEDEDFAKSGFISTEDVE 136
+ +E+N + V +KG G +FT DV L+ V A+ G I+ V
Sbjct: 66 KGHLERNPALEKVLPHIKGNVGFVFTRGDLVDVRDKLLQNKVRAP---ARPGAIAPLPVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|29841185|gb|AAP06198.1| similar to GenBank Accession Number AY072284 60S acidic ribosomal
protein P0 in Spodoptera frugiperda [Schistosoma
japonicum]
Length = 304
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|444321853|ref|XP_004181582.1| hypothetical protein TBLA_0G01150 [Tetrapisispora blattae CBS 6284]
gi|387514627|emb|CCH62063.1| hypothetical protein TBLA_0G01150 [Tetrapisispora blattae CBS 6284]
Length = 312
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K ++L + E+Y +IF+ V N+ + ++ VR + + GKN ++ A+
Sbjct: 6 EKKTEYFNKLREYFEEYKSIFIVGVDNVSSQQMHQVRKNLRGRGVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D ++EK + V +G G +FTN S ++ + A++G I+ ED+ +
Sbjct: 66 FVNDLPDLEKLLPFV----RGNVGFIFTNDSLQEIKEVIISNKVAAPARAGAIAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V + G+ + P +A +L LL
Sbjct: 122 T-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNKVGPSEAALLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + TF P I D+ ++E
Sbjct: 177 NISPFTYGLTVVQVYDNGQ-TF---------PASILDITNEE 208
>gi|322701048|gb|EFY92799.1| 60S acidic ribosomal protein P0 [Metarhizium acridum CQMa 102]
Length = 425
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y ++F+ S+ N+ + ++ +VR+ + D GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYRSVFIVSIDNVSSQQMHEVRHSLRGDGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN ++ A++G ++ DV +
Sbjct: 68 NDTPEYERLLPFV----KGNVGFVFTNGDLKEIRDKLLANRVAAPARAGAVAPVDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + + G+ + P +A +L ++
Sbjct: 124 GNT-----GMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGNKVGPSEATLLNMMNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ + + Y++ + +LD
Sbjct: 179 SPFTYGLGIEQVYDQGQAFPAEILD 203
>gi|71668474|ref|XP_821118.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi strain CL
Brener]
gi|70886487|gb|EAN99267.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 33 AVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDE------- 84
+ KY + + N+R+ ++ DVR D + GK + + + ED+
Sbjct: 18 CLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDK 77
Query: 85 IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPE 144
+ N + L G L+FTN + D + + A+ G I+ DV +P
Sbjct: 78 LLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDV-----IVPA 132
Query: 145 FPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP+ + L + T + KG V + D V GD + A +L+ L
Sbjct: 133 GNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSAGDRVDNSTATLLQKL 185
>gi|148642681|ref|YP_001273194.1| acidic ribosomal protein P0 [Methanobrevibacter smithii ATCC 35061]
gi|222445822|ref|ZP_03608337.1| hypothetical protein METSMIALI_01466 [Methanobrevibacter smithii
DSM 2375]
gi|166223884|sp|A5UKU8.1|RLA0_METS3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|148551698|gb|ABQ86826.1| ribosomal protein L10p [Methanobrevibacter smithii ATCC 35061]
gi|222435387|gb|EEE42552.1| ribosomal protein L10 [Methanobrevibacter smithii DSM 2375]
Length = 335
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL ++KY+ I + + N+ +L+++R + K ++ AL +
Sbjct: 13 NELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASK-- 70
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLP 143
NI +S ++GQ ++ T + + + ED AK G I+T+D+ + EG
Sbjct: 71 NNIVDLSEHMEGQVAVIATEMNP---FKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTG 127
Query: 144 EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVL 203
P +L+Q+G+ ++KG + + K+ + + G+ ++ A L + + +
Sbjct: 128 FEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSAAVASTLSRMDINPMEVGID 187
Query: 204 LYLWYNKKEGTFEN---LLDREKTPMDI 228
L Y ++E + + +D E+T D+
Sbjct: 188 LRAVY-EEEAIYTSEVLAIDEEQTLADV 214
>gi|226469652|emb|CAX76656.1| deoxyribonuclease [Schistosoma japonicum]
Length = 304
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + D + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRKDEKVGMSEATLLGMLK 179
>gi|225717866|gb|ACO14779.1| 60S acidic ribosomal protein P0 [Caligus clemensi]
Length = 313
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS- 80
K N +LV+ +++ F+ N+ + +++ +R + GKN +M A+
Sbjct: 10 KSNYFLKLVQLFDEFPKCFLVGADNVGSKQMQQIRASLRGKGVVLMGKNTMMRKAIRGHL 69
Query: 81 -QEDEIEKNIHVVSSALKGQCGLLFTNRS----KDDVLMWFDVYEDEDFAKSGFISTEDV 135
Q E+EK + +KG G +FTN +DD+L + + AK+G ++ DV
Sbjct: 70 EQNPELEKLL----PHIKGNVGFVFTNEELVSIRDDLL----ANKVKAPAKAGALAPLDV 121
Query: 136 ELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ P + P+ + L + T + KG + + +D ++ GD + +A +L
Sbjct: 122 MV-----PAQNTGLGPEKTSFFQALNIPTKITKGTIEIVQDVSLITAGDRVGMSEATLLN 176
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+L+ + +++ Y+ ++LD
Sbjct: 177 MLQISPFSYGLVVQQVYDSGTIFHPSILD 205
>gi|407847874|gb|EKG03452.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K+ + + KY + + N+R+ ++ DVR D + GK + + +
Sbjct: 6 EAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVER 65
Query: 80 SQE-------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E D++ N + L G L+FTN + D + + A+ G I+
Sbjct: 66 RAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T + KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|50303713|ref|XP_451800.1| 60S acidic ribosomal protein P0 [Kluyveromyces lactis NRRL Y-1140]
gi|49640932|emb|CAH02193.1| KLLA0B05918p [Kluyveromyces lactis]
Length = 311
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSVFVVGVDNVSSQQMHEVRKNLRGRAVVLMGKNTMVRRAVRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN S D+ + A++G ++ ED+ +
Sbjct: 66 FISDFPDYEKLLPFV----KGNVGFIFTNDSLQDIKEVIIANKVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V G + +A +L LL
Sbjct: 122 L-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGKRVGASEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ DDE
Sbjct: 177 NISPFTYGLTVVQVYD----------NGQVFPASILDITDDE 208
>gi|116754717|ref|YP_843835.1| acidic ribosomal protein P0 [Methanosaeta thermophila PT]
gi|116666168|gb|ABK15195.1| LSU ribosomal protein L10P [Methanosaeta thermophila PT]
Length = 321
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
DELV+ + + V ++ + + + +R + S N + A+ KS E
Sbjct: 20 DELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAILKSDE---- 75
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+I + ++ Q L+F++ + + D + K+G ++ D+ ++ G P
Sbjct: 76 -SIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSP 134
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ +L+ G+ + G V + + + K+GDV+TP+ A +LKL++
Sbjct: 135 GPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVITPKVAEVLKLME 182
>gi|241957187|ref|XP_002421313.1| 60S acidic ribosomal protein P0 [Candida dubliniensis CD36]
gi|223644657|emb|CAX40647.1| 60S acidic ribosomal protein, putative [Candida dubliniensis CD36]
Length = 312
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 34/226 (15%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 EKKVQYFTKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSG----FISTE 133
S+ E EK + + KG G +FTN D+ D S
Sbjct: 66 FLSELPEFEKLLPFI----KGNVGFIFTNS---------DLKTIRDTVVSNVVAAPARAG 112
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
V K+ +P +EP + LG+ T + +G + + D V ++ + P +A +
Sbjct: 113 AVAPKDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
L +L + + + Y+ + + P I D+ DDE
Sbjct: 173 LNMLNISPFTYGMSVVQVYD----------NGQVFPSSILDITDDE 208
>gi|71668472|ref|XP_821117.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi strain CL
Brener]
gi|1710588|sp|P26796.2|RLA0_TRYCR RecName: Full=60S acidic ribosomal protein P0
gi|295372|gb|AAA30236.1| ribosomal protein P0 [Trypanosoma cruzi]
gi|70886486|gb|EAN99266.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi]
Length = 323
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K+ + + KY + + N+R+ ++ DVR D + GK + + +
Sbjct: 6 EAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVER 65
Query: 80 SQE-------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E D++ N + L G L+FTN + D + + A+ G I+
Sbjct: 66 RAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T + KG V + D V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|401885486|gb|EJT49600.1| 60S acidic ribosomal protein [Trichosporon asahii var. asahii CBS
2479]
gi|406694878|gb|EKC98197.1| 60S acidic ribosomal protein [Trichosporon asahii var. asahii CBS
8904]
Length = 312
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 24/201 (11%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--EIEKNIH 90
+EKY ++F+ ++ N+ + + +R +D GKN ++ AL D E EK
Sbjct: 19 IEKYPSLFIVNIDNVSSQQCHMIRQSIRDNGVVLMGKNTMVRRALRSMIADFPEYEK--- 75
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEFP 146
V +KG G +FTN DV + S ++ P +P
Sbjct: 76 -VLPYVKGNVGFVFTNGDLKDV---------RETIVSNVVAAPARAGALAPVDVYVPAGN 125
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V G + +A +L +L + +
Sbjct: 126 TGMEPGKTSFFQALGIPTKIARGTIEIVNDVQVVAAGSKVGSSEATLLNMLNISPFTYGM 185
Query: 203 LLYLWYNKKEGTFENLLDREK 223
+ Y+ ++LD E+
Sbjct: 186 TVVAVYDDGSIFAPSVLDIEE 206
>gi|50425433|ref|XP_461310.1| 60S acidic ribosomal protein P0 [Debaryomyces hansenii CBS767]
gi|49656979|emb|CAG89711.1| DEHA2F22242p [Debaryomyces hansenii CBS767]
Length = 310
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IF+ V N+ + ++ ++R + D+ GKN ++ AL
Sbjct: 6 EKKVQYFSKLRELLEEYKSIFIVGVDNVSSQQMHEIRKALRGDATVLMGKNTMVRRALRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D E EK + V +G G +FTN + AK+G ++ +DV +
Sbjct: 66 FLADLPEYEKLMPFV----RGNVGFIFTNSDLKTIRDTIVSNVVAAPAKAGAVAPKDVWI 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D V + + P +A +L +L
Sbjct: 122 PAG-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVRVVETNSKVGPSEATLLNML 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ DDE
Sbjct: 177 DISPFTYGMSVVQVYD----------NGQIFPSSILDITDDE 208
>gi|46124899|ref|XP_387003.1| RLA0_NEUCR 60S acidic ribosomal protein P0 [Gibberella zeae PH-1]
Length = 311
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--E 84
D+L +EKY +IF+ + N+ + ++ ++R+ ++ GKN ++ AL D E
Sbjct: 12 DKLKGLLEKYTSIFIVEIDNVSSQQMHEIRHALRNKGVVLMGKNTMVRRALKTFVADSPE 71
Query: 85 IEKNI-HVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
E+ + HV KG G +FTN + DV++ V + DV + G
Sbjct: 72 YERLLPHV-----KGNVGFVFTNEDLKEVRDVILANKVAAPARAGAL---APADVWVPAG 123
Query: 141 PLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATLLNML 175
>gi|444706446|gb|ELW47786.1| Tetratricopeptide repeat protein 17 [Tupaia chinensis]
Length = 1181
Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 12 LSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGK 69
++K ++KG+ +EL V+ + +F+FSV +++N KL D+RN WK S + K
Sbjct: 1118 IAKVLEKGMT------EELRPCVDTHQYLFIFSVASVKNGKLNDIRNAWKHSNVLWQK 1169
>gi|326516500|dbj|BAJ92405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y + + N+ + +L+++R + DS GKN ++ +
Sbjct: 9 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K+ +S+ L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKL 181
>gi|332373132|gb|AEE61707.1| unknown [Dendroctonus ponderosae]
Length = 315
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +L+ +E+Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFVKLINLLEEYPKCFIVGADNVGSKQMQQIRISLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDE--DFAKSGFISTEDVEL 137
+ +E N + + +KG G +FT S D V + + E++ A++G I+ V +
Sbjct: 66 KGHVESNASLEKLLPHIKGNVGFVFT--SGDLVEVRDRLLENKVRAPARAGAIAPLSVVI 123
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + + GD + +A +L +L
Sbjct: 124 -----PAQNTGLPPEKTSFFQALSIPTKISKGTIEIVNDVNILRPGDKVGASEATLLNML 178
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLD 220
+ +++ Y+ +LD
Sbjct: 179 NISPFSYGLIVEQVYDSGTIFAPAILD 205
>gi|326494674|dbj|BAJ94456.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 320
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y + + N+ + +L+++R + DS GKN ++ +
Sbjct: 9 EKKIAYDQKLCQLLEEYTKVLIAVADNVGSKQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E K+ +S+ L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HSEKTGNKDFLELSNLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEITIPVELIKKGDKVGSSESALLAKL 181
>gi|261349633|ref|ZP_05975050.1| acidic ribosomal protein P0-like protein [Methanobrevibacter
smithii DSM 2374]
gi|288861591|gb|EFC93889.1| acidic ribosomal protein P0-like protein [Methanobrevibacter
smithii DSM 2374]
Length = 335
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIE 86
+EL ++KY+ I + + N+ +L+++R + K ++ AL +
Sbjct: 13 NELKSLIDKYDVIGIVDLLNIPAKQLQEMRKSLHNKAVIRMSKKNLIDLALEDCNASK-- 70
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGPLP 143
NI +S ++GQ ++ T + + + ED AK G I+T+D+ + EG
Sbjct: 71 NNIVDLSEHMEGQVAVIATEMNP---FKLYKILEDSKTSAPAKPGAIATDDIVIPEGDTG 127
Query: 144 EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVL 203
P +L+Q+G+ ++KG + + K+ + + G+ ++ A L + + +
Sbjct: 128 FEPGPFLGELQQVGIPAKIDKGKIVVSKETVLVEAGEEVSVAVASTLSRMDINPMEVGID 187
Query: 204 LYLWYNKKEGTFEN---LLDREKTPMDI 228
L Y ++E + + +D E+T D+
Sbjct: 188 LRAVY-EEEAIYTSEVLAIDEEQTLADV 214
>gi|385773733|ref|YP_005646300.1| 50S ribosomal protein L10 [Sulfolobus islandicus HVE10/4]
gi|385776369|ref|YP_005648937.1| 50S ribosomal protein L10 [Sulfolobus islandicus REY15A]
gi|323475117|gb|ADX85723.1| ribosomal protein L10 [Sulfolobus islandicus REY15A]
gi|323477848|gb|ADX83086.1| ribosomal protein L10 [Sulfolobus islandicus HVE10/4]
Length = 338
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKN 88
EL + ++ N I + S++ KL ++R + KV L K N
Sbjct: 23 ELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAII----KVTKNTLFKIAAKNAGIN 78
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEFP 146
+ L G +FT + M+F+ Y+ +A G + E+V + G +P P
Sbjct: 79 TEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGP 138
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
I +L +QT + G V + KD V K GDV+ E IL+
Sbjct: 139 --ILSVFGKLKVQTKVQDGKVHVVKDTVVAKSGDVIPTEALPILQ 181
>gi|424812664|ref|ZP_18237904.1| ribosomal protein L10 [Candidatus Nanosalinarum sp. J07AB56]
gi|339756886|gb|EGQ40469.1| ribosomal protein L10 [Candidatus Nanosalinarum sp. J07AB56]
Length = 291
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/206 (16%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K+ + + + +E ++ + + +Q++ +L++++ + + + + +M A+ +++
Sbjct: 14 KEEIVENTAEMIESHSIVGILDMQSLPARQLQEIKGELSEFASVRMVRKTLMEIAVDQAE 73
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
+D I+ + + AL Q L+F+ +S + D + A+ G ++ + + + EG
Sbjct: 74 KDGIDAVLE--NPAL--QPALIFSEKSPFQLYRLIDENKTSAAAQGGEVAPDQITIPEGD 129
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFK 201
P + +L+Q G Q + G + + ++ + ++GD + + +L L + +
Sbjct: 130 TGIGPGPMLGKLQQFGAQVQVQDGSIHVQEETVMLEEGDTIDDDAVEVLNQLGIEPLEIG 189
Query: 202 VLLYLWYNKKEGTFENLLDREKTPMD 227
+ L + Y+ N+ D+++ +D
Sbjct: 190 LDLKVAYSDG-----NIFDKQELDID 210
>gi|229585295|ref|YP_002843797.1| acidic ribosomal protein P0 [Sulfolobus islandicus M.16.27]
gi|259491689|sp|C3MZC0.1|RLA0_SULIA RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|228020345|gb|ACP55752.1| ribosomal protein L10 [Sulfolobus islandicus M.16.27]
Length = 338
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEKN 88
EL + ++ N I + S++ KL ++R + KV L K N
Sbjct: 23 ELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAII----KVTKNTLFKIAAKNAGIN 78
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEFP 146
+ L G +FT + M+F+ Y+ +A G + E+V + G +P P
Sbjct: 79 TEKLEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGMPAGP 138
Query: 147 HSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
I +L +QT + G V + KD V K GDV+ E IL+
Sbjct: 139 --ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQ 181
>gi|171687509|ref|XP_001908695.1| hypothetical protein [Podospora anserina S mat+]
gi|41688720|sp|Q9C3Z6.1|RLA0_PODAS RecName: Full=60S acidic ribosomal protein P0
gi|12963430|gb|AAK11262.1|AF331714_1 ribosomal protein P0 [Podospora anserina]
gi|170943716|emb|CAP69368.1| unnamed protein product [Podospora anserina S mat+]
Length = 314
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ SV N+ + ++ ++R +D GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN ++ + A++G ++ DV +
Sbjct: 68 VDSPEYERLLPFV----KGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNML 176
>gi|116180696|ref|XP_001220197.1| 60S acidic ribosomal protein P0 [Chaetomium globosum CBS 148.51]
gi|88185273|gb|EAQ92741.1| 60S acidic ribosomal protein P0 [Chaetomium globosum CBS 148.51]
Length = 311
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ SV N+ + ++ ++R + + GKN ++ AL
Sbjct: 8 KAGYFDKLKSLLEEYASIFIVSVDNVSSQQMHEIRQSLRGNGVVLMGKNTMVRRALKTFL 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN ++ + A++G ++ DV +
Sbjct: 68 ADSPEYERLLPFV----KGNIGFVFTNSDLKEIRDKILANKVAAPARAGAVAPSDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGLKVGPSEATLLNML 176
>gi|332373950|gb|AEE62116.1| unknown [Dendroctonus ponderosae]
Length = 317
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +LV+ +E Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KANYFAKLVQLLEDYPKCFIVGADNVGSKQMQQIRIGLRGSAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+ E+N + + +KG G +FT K+D++ D + A++G I+ V
Sbjct: 66 KGHCERNPALEKLLPRIKGNVGFVFT---KNDLVEVRDKLLENKVRAPARAGAIAPLPVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|344299786|gb|EGW30139.1| hypothetical protein SPAPADRAFT_63750 [Spathaspora passalidarum
NRRL Y-27907]
Length = 312
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 DKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ E EK + V KG G +FTN D+ D S ++
Sbjct: 66 FLSELPEFEKLLPFV----KGNVGFIFTNA---------DLKTIRDTVVSNVVAAPARAG 112
Query: 138 KEGPL----PEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
PL P +EP + LG+ T + +G + + D V + + P +A +
Sbjct: 113 AVAPLDVWIPAGNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEADQKVGPSEATL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
L +L + + + Y+ + + P I D+ DDE
Sbjct: 173 LNMLNISPFTYGMTVVQVYD----------NGQVFPSSILDITDDE 208
>gi|307167494|gb|EFN61067.1| 60S acidic ribosomal protein P0 [Camponotus floridanus]
Length = 318
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M A+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|340719892|ref|XP_003398378.1| PREDICTED: 60S acidic ribosomal protein P0-like isoform 1 [Bombus
terrestris]
gi|340719894|ref|XP_003398379.1| PREDICTED: 60S acidic ribosomal protein P0-like isoform 2 [Bombus
terrestris]
Length = 317
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M A+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|322797915|gb|EFZ19789.1| hypothetical protein SINV_09784 [Solenopsis invicta]
Length = 318
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M K+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMR----KAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|85089944|ref|XP_958183.1| 60S acidic ribosomal protein P0 [Neurospora crassa OR74A]
gi|30316271|sp|Q96TJ5.1|RLA0_NEUCR RecName: Full=60S acidic ribosomal protein P0
gi|13899020|gb|AAK48941.1|AF361225_1 60S ribosomal protein P0 [Neurospora crassa]
gi|13899022|gb|AAK48942.1| 60S ribosomal protein P0 [Neurospora crassa]
gi|28919517|gb|EAA28947.1| 60S acidic ribosomal protein P0 [Neurospora crassa OR74A]
Length = 313
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ SV N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFV 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN +V + A++G I+ DV +
Sbjct: 68 ADTPEYERLLPFV----KGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ TF P D+ D+ +++
Sbjct: 179 SPFTYGMGIAQVYDQGN-TF---------PSDVLDISEEQ 208
>gi|408388341|gb|EKJ68027.1| hypothetical protein FPSE_11838 [Fusarium pseudograminearum CS3096]
Length = 311
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--E 84
D+L +EKY +IF+ + N+ + ++ ++R+ + GKN ++ AL D E
Sbjct: 12 DKLKGLLEKYTSIFIVEIDNVSSQQMHEIRHALRSKGVVLMGKNTMVRRALKTFVTDSPE 71
Query: 85 IEKNI-HVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
E+ + HV KG G +FTN + DV++ V + DV + G
Sbjct: 72 YERLLPHV-----KGNVGFVFTNEDLKEVRDVILANKVAAPARAGAL---APADVWVPAG 123
Query: 141 PLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 -----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGPSEATLLNML 175
>gi|339238541|ref|XP_003380825.1| 60S acidic ribosomal protein P0 [Trichinella spiralis]
gi|316976247|gb|EFV59574.1| 60S acidic ribosomal protein P0 [Trichinella spiralis]
Length = 322
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK-- 79
K N +LVK +E+Y F+ V N+ +++++ +R + + GKN ++ A+
Sbjct: 10 KSNYFLKLVKFLEEYPKCFIVGVDNVGSNQMQQIRISLRGRAELLMGKNTMIRKAIRGYL 69
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ ++E IH V G G +FTN +V + AK+G ++ DV
Sbjct: 70 PKNPDLECLIHHVV----GNVGFVFTNEDLAEVRDAIIAKKVAAPAKAGIVAPIDVR--- 122
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
LP + P+ + L + T ++KG + + D + K+ + + +A +L +L
Sbjct: 123 --LPAQNTGLGPEKTSFFQALNIPTKISKGTIEILNDVHLIKENEKVGASEAALLNML 178
>gi|149234680|ref|XP_001523219.1| 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453008|gb|EDK47264.1| 60S acidic ribosomal protein P0 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 314
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
++K +L + +E+Y +IFV V N+ + ++ ++R + D+ GKN ++ A+
Sbjct: 6 DKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRDDAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ + EK + V KG G +FTN + A++G ++ DV +
Sbjct: 66 FLSELPDYEKLLPFV----KGNVGFIFTNGDLKTIRDTITSNVVAAPARAGAVAPADVWI 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D V +K + P +A +L +L
Sbjct: 122 PAG-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEKDAKVGPSEATLLNML 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ DDE
Sbjct: 177 NISPFTYGMTVVQVYD----------NGQIFPSSILDITDDE 208
>gi|357625515|gb|EHJ75936.1| ribosomal protein P0 [Danaus plexippus]
Length = 316
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+D +E N + + +KG G +FT + D++ D + A+ G I+ V
Sbjct: 66 KDHLETNPALEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARPGAIAPLAVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAHNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|397490825|ref|XP_003816390.1| PREDICTED: 60S acidic ribosomal protein P0-like [Pan paniscus]
Length = 317
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + ++G G +FT ++ + A++G I+ +V +
Sbjct: 70 ENIPALEKLL----PHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGGIAPCEVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDMQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLL 204
F +++
Sbjct: 181 SPFSFGLVI 189
>gi|268306372|gb|ACY95307.1| ribosomal protein P0 [Manduca sexta]
Length = 317
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+D ++ N + + +KG G +FT DV + + A+ G I+ V +
Sbjct: 66 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 178
>gi|229365844|gb|ACQ57902.1| 60S acidic ribosomal protein P0 [Anoplopoma fimbria]
Length = 315
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRSKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT +V + A++G I+ +V +
Sbjct: 70 ENNPALEKLL----PHIKGNVGFVFTKEDLAEVRDLLLTNKVPASARAGAIAPCEVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVGLIKPGDKVGASEATLLNML 178
>gi|121543573|gb|ABM55512.1| putative ribosomal protein P0 [Maconellicoccus hirsutus]
Length = 317
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +LV +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KANYFLKLVNLLDEYPKCFIVGADNVGSKQMQQIRISLRGSGIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYED--EDFAKSGFISTEDVEL 137
IE+N + + +KG G +FT RS D V + + E+ + A++G I+ V +
Sbjct: 66 RGHIERNPALERLLPFIKGNVGFVFT-RS-DLVEIREKLLENKVQAPARAGAIAPCPVVI 123
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K+GD + +A +L +L
Sbjct: 124 -----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNML 178
>gi|160331438|ref|XP_001712426.1| rla0 [Hemiselmis andersenii]
gi|159765874|gb|ABW98101.1| rla0 [Hemiselmis andersenii]
Length = 309
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 8/193 (4%)
Query: 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALG 78
L +K ++L KY I + N+ +++++ R K S GKN ++ L
Sbjct: 4 LNQKSLYFEKLAFLFSKYPKIIIVQADNVGSNQIQKCRKALQKSSILIMGKNSIIKKVLK 63
Query: 79 KSQEDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
K +IEKN ++ + G GL+FT ++ AK G I+ +V
Sbjct: 64 K----QIEKNPNMQDLYDFTTGNVGLIFTKNDPFEIKKILKENRIPAPAKVGQIAQNEVI 119
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
+ GP E P + L + T + KG + + + +KG V+ +A +LK L
Sbjct: 120 IPAGPT-ELPPDGTSFFQALNIPTKIQKGQIEIQDPIKLIEKGKVVGNSEAALLKKLNIV 178
Query: 197 MAKFKVLLYLWYN 209
F++ + L ++
Sbjct: 179 PFSFELQIKLVFD 191
>gi|350408261|ref|XP_003488353.1| PREDICTED: 60S acidic ribosomal protein P0-like [Bombus impatiens]
Length = 317
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M K+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMR----KAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|366986769|ref|XP_003673151.1| hypothetical protein NCAS_0A02020 [Naumovozyma castellii CBS 4309]
gi|342299014|emb|CCC66760.1| hypothetical protein NCAS_0A02020 [Naumovozyma castellii CBS 4309]
Length = 313
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IF+ V N+ + ++ +VR + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYRSIFIVGVDNVSSQQMHEVRKELRGRGVVLMGKNTMVRRAIRD 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK V +KG G +FTN S ++ + A++G I+ ED+ +
Sbjct: 66 FITDLPDYEK----VLPFIKGNVGFVFTNSSLQEIKEVIISNKVAAPARAGAIAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGHKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ KF + + Y+ + + P + D+ D+E
Sbjct: 177 EISPFKFGLSIVQVYD----------NGQIFPSSVLDITDEE 208
>gi|145506509|ref|XP_001439215.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406399|emb|CAK71818.1| unnamed protein product [Paramecium tetraurelia]
Length = 306
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
+ G+ G +FT+ D+ + + E A+ G ++ DV + GP P SI+
Sbjct: 83 VAGKVGFVFTDTPVFDLKPVIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQ-FFHA 141
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTF 215
L + T + KG + + KD V K G + QA +L+ L KK + + + Y+
Sbjct: 142 LQIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLSCYDNG---- 197
Query: 216 ENLLDREKTPMDIYDM 231
++L++++ +++ D+
Sbjct: 198 -SILNKQQVSVNLNDI 212
>gi|340372559|ref|XP_003384811.1| PREDICTED: 60S acidic ribosomal protein P0-like [Amphimedon
queenslandica]
Length = 323
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKN----KVMAYAL 77
K N L++ +Y+ +F+ N+ + +++ +R + GKN K++ AL
Sbjct: 10 KANYALRLMELFSEYSKVFIVGADNVGSKQMQQIRISLRGKGILLMGKNTTIRKIIRSAL 69
Query: 78 GKSQEDEIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTE 133
++EK + HV KG G +FT+ DV D+ D AK+G ++
Sbjct: 70 --DTNPQLEKLLPHV-----KGNIGFVFTHEDLKDVR---DLITDNKVSAPAKAGALAPI 119
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
DV++ P + P+ + L +QT + +G + + + + KK + + +A +
Sbjct: 120 DVKI-----PPQNTGLGPEKTSFFQALRIQTKIARGTIEILGEVHIIKKDEKVGASEATL 174
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L++LK + ++++ Y+ ++LD
Sbjct: 175 LQMLKIMPFSYGLVIFQVYDSGSVFSPDVLD 205
>gi|307199404|gb|EFN80029.1| 60S acidic ribosomal protein P0 [Harpegnathos saltator]
Length = 316
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M A+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+E+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHVERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|346979404|gb|EGY22856.1| 60S acidic ribosomal protein P0 [Verticillium dahliae VdLs.17]
Length = 312
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 100/221 (45%), Gaps = 28/221 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+YN+IF+ +V N+ + ++ VR+ + D+ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYNSIFIVTVDNVSSQQMHQVRHSLRGDAVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
D E E+ + HV KG G +FTN ++ + A++G ++ DV +
Sbjct: 68 ADSPEYERLLPHV-----KGNVGFVFTNGDLKEIRDKVLANKVAAPARAGAVAPSDVWIP 122
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
G +EP + LG+ T + +G + + D + + + +A +L LL
Sbjct: 123 AG-----NTGMEPGKTSFFQALGVPTKIARGTIEITSDLKLVEANSKVGASEASLLNLLN 177
Query: 195 KKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ + TF P D+ D+ +++
Sbjct: 178 ISPFTYGLGIAQVYDQGQ-TF---------PADVLDIGEEQ 208
>gi|66559310|ref|XP_623106.1| PREDICTED: 60S acidic ribosomal protein P0 isoform 1 [Apis
mellifera]
gi|380023762|ref|XP_003695681.1| PREDICTED: 60S acidic ribosomal protein P0-like [Apis florea]
Length = 317
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M K+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMR----KAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|312374937|gb|EFR22396.1| hypothetical protein AND_15303 [Anopheles darlingi]
Length = 811
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQEDEIEKNIHVV 92
+++Y F+ N+ + +++ +R + S GKN +M A+ E+ +++ +
Sbjct: 516 LDEYPKCFIVGADNVGSRQMQTIRMSLRGSAIVLMGKNTMMRKAIRGHLENN--QSLEKL 573
Query: 93 SSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQ 152
+ +KG G +FT D+ + A++G I+ +V +P + P+
Sbjct: 574 LTHIKGNVGFVFTKGDLADIRDKLTESKVRAPARAGAIAPLEV-----IIPAQNTGLGPE 628
Query: 153 ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ L + T ++KG + + D + K GD + +A +L +L
Sbjct: 629 KTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 673
>gi|15921650|ref|NP_377319.1| acidic ribosomal protein P0 [Sulfolobus tokodaii str. 7]
Length = 337
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
EL + + +Y+ I + +++ KL D+R + + KN + A + D
Sbjct: 23 ELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKVTKNTLFGIAAKNAGLD---- 78
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEF 145
+ + L G +FTN++ ++ ++ ++ + +A G + E+V + G +P
Sbjct: 79 -VSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAG 137
Query: 146 PH-SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P SI +L ++T + G + + +D + K GD + P+ IL+ L
Sbjct: 138 PALSI---FGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKL 183
>gi|363548463|sp|Q971J2.2|RLA0_SULTO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|342306454|dbj|BAK54543.1| 50S ribosomal protein P0 [Sulfolobus tokodaii str. 7]
Length = 334
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
EL + + +Y+ I + +++ KL D+R + + KN + A + D
Sbjct: 20 ELEQKLREYHTIIIANIEGFPADKLHDIRKKMRGMAEIKVTKNTLFGIAAKNAGLD---- 75
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEF 145
+ + L G +FTN++ ++ ++ ++ + +A G + E+V + G +P
Sbjct: 76 -VSKLEPYLTGPNAFIFTNKNPFEIQLFLSKFKLKRYAMPGDKADEEVVIPAGDTGMPAG 134
Query: 146 PH-SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P SI +L ++T + G + + +D + K GD + P+ IL+ L
Sbjct: 135 PALSI---FGKLKIKTKVQDGKIHVTQDTVIAKPGDPIPPDAIPILQKL 180
>gi|443898962|dbj|GAC76295.1| 60S acidic ribosomal protein P0 [Pseudozyma antarctica T-34]
Length = 313
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
D+L + +EKY +IF+ ++ N+ + ++ +R + GKN + AL D
Sbjct: 14 DKLTELLEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRMLVGD--N 71
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + LKG G +FT+ DV A++G + ED+ +K G
Sbjct: 72 PDYERLLPHLKGNIGFVFTSGDLKDVRDLILSNRVAAPARAGAYAPEDIFVKAG-----N 126
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V G+ + +A +L +L + +
Sbjct: 127 TGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNISPFTYGM 186
Query: 203 LLYLWYNKKEGTFENLLD 220
+ Y++ + ++LD
Sbjct: 187 TVVQIYDQGQCFESSVLD 204
>gi|15897278|ref|NP_341883.1| acidic ribosomal protein P0 [Sulfolobus solfataricus P2]
gi|284174527|ref|ZP_06388496.1| acidic ribosomal protein P0 [Sulfolobus solfataricus 98/2]
gi|14424458|sp|P96039.2|RLA0_SULSO RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E; AltName: Full=Ribosomal protein L10
gi|13813485|gb|AAK40673.1| LSU acidic ribosomal protein P0 homolog (rplp0) [Sulfolobus
solfataricus P2]
Length = 338
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
EL + ++ N I + +++ KL ++R + + KN + A K+ +IEK
Sbjct: 23 ELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIA-AKNAGIDIEK 81
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEF 145
+ L G +FT + M+F+ Y+ +A G + E+V + G +P
Sbjct: 82 ----LEQYLTGPNVFIFTKDNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I +L +QT + G V + KD V K GDV+ E IL+ L
Sbjct: 138 P--ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKL 183
>gi|290986534|ref|XP_002675979.1| predicted protein [Naegleria gruberi]
gi|284089578|gb|EFC43235.1| predicted protein [Naegleria gruberi]
Length = 299
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 17/182 (9%)
Query: 28 DELVKAVEKYNNIFVFSVQN-MRNSKLKDVRNDWKDSRFFF-GKNKVMAYALGKSQEDEI 85
+++++ ++N+ + + M++ +L+ +R + GKN ++ A+ +D I
Sbjct: 11 EDVIQHFHDHSNVIIVEIDTRMKSDQLQIIRMKLRGRAILLKGKNTLIKSAIRNLAQD-I 69
Query: 86 EKNI------HVVSSALK------GQCGLLFTNRSK-DDVLMWFDVYEDEDFAKSGFIST 132
+ N+ H S LK G GL+FTN S+ ++++ ++ E AK G S
Sbjct: 70 QFNVKPSERKHNPESLLKICEYLNGNVGLIFTNSSEIEELIEQIQSFKFETRAKIGERSP 129
Query: 133 EDVELKEGPLPEFPHSI-EPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
++ ++ G P I P +QLG+ G V +D + +G+ + QA +L+
Sbjct: 130 RNIYIRSGFTATIPVPILAPMFQQLGVVFRTIVGQVESCRDCLILSEGEKIGKMQADLLE 189
Query: 192 LL 193
+L
Sbjct: 190 ML 191
>gi|150400626|ref|YP_001324392.1| acidic ribosomal protein P0 [Methanococcus aeolicus Nankai-3]
gi|166223881|sp|A6UTF8.1|RLA0_META3 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|150013329|gb|ABR55780.1| ribosomal protein L10 [Methanococcus aeolicus Nankai-3]
Length = 338
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K+G I+ D+ ++ G P +L+ GL ++KG + + D + K+G+V++P+
Sbjct: 117 KAGAIAPSDIVVEAGSTGMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPK 176
Query: 186 QARILKLLKKKMAKFKVLLYLWY 208
A +L L K K + L Y
Sbjct: 177 VAVVLSALGIKPTKVGLDLLAAY 199
>gi|429856188|gb|ELA31112.1| 60s acidic ribosomal protein p0 [Colletotrichum gloeosporioides
Nara gc5]
Length = 339
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ SV N+ + ++ ++R + + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ + A++G ++ DV +
Sbjct: 68 PDAPEYERLLPFV----KGNVGFVFTNGDLKDIRDKILANKVAAPARAGAVAPSDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDLKLVEANTKVGPSEATLLNML 176
>gi|453082868|gb|EMF10915.1| 60S acidic ribosomal protein P0 [Mycosphaerella populorum SO2202]
Length = 315
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 94/216 (43%), Gaps = 26/216 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y IF+ +V N+ + ++ ++R + + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKTIFIVAVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRALKTFM 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTN----RSKDDVLMWFDVYEDEDFAKSGFISTED 134
D E E+ + HV KG G +FTN +++ +L D +
Sbjct: 68 PDFPEYERLLPHV-----KGNVGFIFTNGDLKATREKIL---------DNRVAAPARAGA 113
Query: 135 VELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
V + +P +EP + LG+ T + +G + + D V + G + +A +L
Sbjct: 114 VAPADVYVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITSDVKVAEAGSRVGASEATLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPM 226
+L + + + Y++ + ++LD E++ +
Sbjct: 174 NMLNISPFTYGMSIAQIYDQGQTFDASVLDIEESQL 209
>gi|284998277|ref|YP_003420045.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|284446173|gb|ADB87675.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5]
Length = 338
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKN---KVMAYALGKSQEDE 84
EL + ++ N I + S++ KL ++R + KN K+ A G S E
Sbjct: 23 ELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKIAAKNAGISTEK- 81
Query: 85 IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PL 142
+ L G +FT + M+F+ Y+ +A G + E+V + G +
Sbjct: 82 -------LEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVMIPAGDTGM 134
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P P I +L +QT + G V + KD V K GDV+ E IL+
Sbjct: 135 PAGP--ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQ 181
>gi|156937970|ref|YP_001435766.1| acidic ribosomal protein P0 [Ignicoccus hospitalis KIN4/I]
gi|229564303|sp|A8ABQ7.1|RLA0_IGNH4 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|156566954|gb|ABU82359.1| LSU ribosomal protein L10P [Ignicoccus hospitalis KIN4/I]
Length = 346
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
L G +FTN + + + + AK G ++ ++ + G P I +
Sbjct: 91 LVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGK 150
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
L ++T + G + + KD V K GDV++PE A +L+
Sbjct: 151 LKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQ 186
>gi|320584043|gb|EFW98255.1| 60S acidic ribosomal protein P0 [Ogataea parapolymorpha DL-1]
Length = 311
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++F+ V N+ + ++ ++R KD+ GKN ++ AL
Sbjct: 6 EKKVEYFSKLKQLLEEYKSVFIVGVDNVSSQQMHEIRKALRKDAVVLMGKNTMVRRALRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSG----FI 130
++ + EK + V +G G +FTN ++ +V++ V F+
Sbjct: 66 FIAENPDYEKLMPFV----RGNVGFVFTNSDLKTIRNVILENKVAAPARAGAIAPGDVFV 121
Query: 131 STEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
+ ++ G F + LG+ T + +G + + D + K + P +A +L
Sbjct: 122 PAGNTGMEPGKTSFF--------QALGVPTKIARGTIEITTDVKILTKDQKVGPSEATLL 173
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+L + + + Y+ D + P I D+ D+E
Sbjct: 174 NMLNISPFTYGLTVVQVYD----------DGQVFPSSILDITDEE 208
>gi|384433794|ref|YP_005643152.1| 50S ribosomal protein L10 [Sulfolobus solfataricus 98/2]
gi|1814429|gb|AAB99526.1| ribosomal protein L10 [Sulfolobus solfataricus]
gi|261601948|gb|ACX91551.1| ribosomal protein L10 [Sulfolobus solfataricus 98/2]
Length = 335
Score = 40.8 bits (94), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
EL + ++ N I + +++ KL ++R + + KN + A K+ +IEK
Sbjct: 20 ELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIA-AKNAGIDIEK 78
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PLPEF 145
+ L G +FT + M+F+ Y+ +A G + E+V + G +P
Sbjct: 79 ----LEQYLTGPNVFIFTKDNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 134
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P I +L +QT + G V + KD V K GDV+ E IL+ L
Sbjct: 135 P--ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKL 180
>gi|378733805|gb|EHY60264.1| 60S acidic ribosomal protein P0 [Exophiala dermatitidis NIH/UT8656]
Length = 314
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQED--E 84
D+L +++Y +IF+ V N+ + ++ ++R + D+ GKN ++ AL D E
Sbjct: 13 DKLKTLLDEYKSIFIVGVDNVSSQQMHEIRQALRGDAVVLMGKNTMVRRALKGFVADNPE 72
Query: 85 IEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP-- 141
E+ + HV KG G +FTN + D+ A + G
Sbjct: 73 YERLLPHV-----KGNVGFIFTNGDLKTI-------RDKILANRVAAPARAGAIAPGDVY 120
Query: 142 LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+P +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 121 VPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNML 176
>gi|401412674|ref|XP_003885784.1| 60S acidic ribosomal protein P0 [Neospora caninum Liverpool]
gi|147842866|dbj|BAF62528.1| ribosomal phosphoprotein P0 [Neospora caninum]
gi|325120204|emb|CBZ55758.1| 60S acidic ribosomal protein P0 [Neospora caninum Liverpool]
Length = 311
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++++ L +E+Y + V ++ + ++ D+R + + GKN ++ AL +
Sbjct: 9 DKRKTYFSRLFALLEQYPRVLVVEADHVGSKQMADIRLALRGKAVVLMGKNTMIRTALKQ 68
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ ++EK + +V + G +F +V + A+ G + DV +
Sbjct: 69 KMSEMPQLEKLLPLV----RLNVGFIFCIEDPAEVRKIVSANKVPAPARQGVFAPIDVFI 124
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
GP P S + LG+ T + KG + + + + K+GD +T A +L+ L K
Sbjct: 125 PAGPTGMDPGSTS-FFQALGIATKIVKGQIEIQTEVHLIKEGDKVTASAATLLQKLGIKP 183
Query: 198 AKFKVLLYLWYN 209
++ + + Y+
Sbjct: 184 FEYGLAIQHVYD 195
>gi|407408604|gb|EKF31979.1| 60S acidic ribosomal protein P0 [Trypanosoma cruzi marinkellei]
Length = 323
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 17/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K+ + + KY + + N+R+ ++ DVR D + GK + + +
Sbjct: 6 EAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVER 65
Query: 80 SQE-------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E D++ N + L G L+FTN + D + + A+ G I+
Sbjct: 66 RAEDKKASAYDKLLYNTCIERKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAP 125
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T + KG V + + V GD + A
Sbjct: 126 CDV-----IVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSEKKVLSVGDRVDNSTAT 180
Query: 189 ILKLL 193
+L+ L
Sbjct: 181 LLQKL 185
>gi|321463232|gb|EFX74249.1| hypothetical protein DAPPUDRAFT_307348 [Daphnia pulex]
Length = 320
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--EI 85
+LV+ +++Y F+ N+ + +L+ +R +D + GKN ++ A+ E+ +
Sbjct: 16 KLVQLLDEYPKCFIVGADNVGSKQLQQIRRSLRDHAVVLMGKNTMIRKAIRGHLENNPAL 75
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFD-VYEDEDFAKSGFISTEDVELKEGPLPE 144
EK + ++G G +FT K+D++ D + E+ A + + G L
Sbjct: 76 EK----LLPHIRGNVGFVFT---KNDLVDVRDRLTENRVRAPA----------RAGALAP 118
Query: 145 FPHSIEPQ-----------LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P IEPQ + L + T ++KG + + V K+G+ + A +L +L
Sbjct: 119 MPVDIEPQNTGLGPEKTSFFQALSIPTKISKGTIEIITTVNVIKEGERVDASAATLLNML 178
>gi|383862848|ref|XP_003706895.1| PREDICTED: 60S acidic ribosomal protein P0-like [Megachile
rotundata]
Length = 316
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + ++ GKN +M K+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMR----KAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|114577027|ref|XP_001168269.1| PREDICTED: 60S acidic ribosomal protein P0-like isoform 3 [Pan
troglodytes]
Length = 317
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 82/189 (43%), Gaps = 16/189 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ + + GKN +M G++
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIHMSLRGKVVVLMGKNTMM----GRAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+E N + + ++G G +FT +V + A++G I+ +V +
Sbjct: 66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEVRDMLLANKVPAAARAGGIAPCEVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTFFFQALGITTKISRGTIEILSDMQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLL 204
F +++
Sbjct: 181 SPFSFGLVI 189
>gi|227830763|ref|YP_002832543.1| acidic ribosomal protein P0 [Sulfolobus islandicus L.S.2.15]
gi|229579658|ref|YP_002838057.1| acidic ribosomal protein P0 [Sulfolobus islandicus Y.G.57.14]
gi|229581676|ref|YP_002840075.1| acidic ribosomal protein P0 [Sulfolobus islandicus Y.N.15.51]
gi|259491691|sp|C3MR85.1|RLA0_SULIL RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|259491693|sp|C3NG93.1|RLA0_SULIN RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|259491694|sp|C3N7E1.1|RLA0_SULIY RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|227457211|gb|ACP35898.1| ribosomal protein L10 [Sulfolobus islandicus L.S.2.15]
gi|228010373|gb|ACP46135.1| ribosomal protein L10 [Sulfolobus islandicus Y.G.57.14]
gi|228012392|gb|ACP48153.1| ribosomal protein L10 [Sulfolobus islandicus Y.N.15.51]
Length = 338
Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKN---KVMAYALGKSQEDE 84
EL + ++ N I + S++ KL ++R + KN K+ A G S E
Sbjct: 23 ELTELIKNSNTILIGSLEGFPADKLHEIRKKLRGKAIIKVTKNTLFKIAAKNAGISTEK- 81
Query: 85 IEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG--PL 142
+ L G +FT + M+F+ Y+ +A G + E+V + G +
Sbjct: 82 -------LEQYLTGPNVFIFTKDNPFLTNMFFENYKLRRYAMPGDKAEEEVIIPAGDTGM 134
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P P I +L +QT + G V + KD V K GDV+ E IL+
Sbjct: 135 PAGP--ILSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPTEALPILQ 181
>gi|225712888|gb|ACO12290.1| 60S acidic ribosomal protein P0 [Lepeophtheirus salmonis]
Length = 314
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++Y F+ N+ + +++ +R + GKN +M A+
Sbjct: 10 KSNYFLKLVQLFDEYPKCFLVGADNVGSKQMQQIRASLRGKGVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
I+KN ++ + ++G G +FT+ V + + AK+G ++ DV +
Sbjct: 66 RGHIDKNPNLEKLLPHIRGNVGFVFTSEDLVAVRDSLIANKVKAPAKAGALAPLDVRV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + L + T + KG + + D + K GD + A +L +LK
Sbjct: 124 ---PAQNTGLGPEKTSFFQALNIPTKITKGTIEIVHDVHLIKAGDRVGMSDATLLNMLKI 180
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ +++ Y+ ++LD
Sbjct: 181 SPFSYGLVVQQVYDSGTIFHPSILD 205
>gi|350296149|gb|EGZ77126.1| 60S acidic ribosomal protein P0 [Neurospora tetrasperma FGSC 2509]
Length = 313
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ SV N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFL 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN +V + A++G I+ DV +
Sbjct: 68 VDTPEYERLLPFV----KGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ TF P D+ D+ +++
Sbjct: 179 SPFTYGMGIAQVYDQGN-TF---------PSDVLDISEEQ 208
>gi|342356349|gb|AEL28833.1| ribosomal protein P0 [Heliconius melpomene cythera]
Length = 316
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFIVGGDNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+D +E N + + +KG G +FT + D++ D + A+ G I+ V
Sbjct: 66 KDHLETNPALEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARPGAIAPLAVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAHNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|297620219|ref|YP_003708324.1| 50S ribosomal protein L10 [Methanococcus voltae A3]
gi|297379196|gb|ADI37351.1| ribosomal protein L10 [Methanococcus voltae A3]
Length = 336
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 38 NNIFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVVSSAL 96
N + + + + + +L+++R++ +D +N +M A+ + E+ + + L
Sbjct: 29 NVVAIIDMMEVPSVQLQEIRDNIRDLMTLRMSRNTLMKRAIEEVAEETNNPSFTKLVDCL 88
Query: 97 KGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQL 156
+ ++ T + + + + K+G + D+E+K G P +L+ +
Sbjct: 89 EKGAAIIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGPFLSELKAV 148
Query: 157 GLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
GL + KG + + +D V K+GDV++ + A +L L K
Sbjct: 149 GLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIK 188
>gi|307199372|gb|EFN79997.1| 60S acidic ribosomal protein P0 [Harpegnathos saltator]
Length = 316
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFTKLVQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGNGVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+E+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHVERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|336464067|gb|EGO52307.1| 60S acidic ribosomal protein P0 [Neurospora tetrasperma FGSC 2508]
Length = 318
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 26/220 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ SV N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFV 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN +V + A++G I+ DV +
Sbjct: 68 VDTPEYERLLPFV----KGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y++ TF P D+ D+ +++
Sbjct: 179 SPFTYGMGIAQVYDQGN-TF---------PSDVLDISEEQ 208
>gi|323450214|gb|EGB06096.1| hypothetical protein AURANDRAFT_60208 [Aureococcus anophagefferens]
Length = 281
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 2/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
ERKQ +++ ++ Y+ IF+ N+ + + + +R + + GKN +M L
Sbjct: 6 ERKQEYFEKMEGLLDDYSKIFIVHCDNVGSKQFQQIRIALRGKAVVLMGKNTMMRKVLNA 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ + G G +FTN DV + A+ G + DV +
Sbjct: 66 YLAKNPGHPYEMLLPKVLGNVGFVFTNEDLADVRELIEANRVPAPARVGATAPIDVIVPP 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
GP P + L + T + KG + + + +KGD + +A +L+ L
Sbjct: 126 GPTDCDPGQTN-FFQTLQIATKIVKGRIEITNPVNLLRKGDRVGNSEAVLLQKL 178
>gi|320101300|ref|YP_004176892.1| 50S ribosomal protein L10 [Desulfurococcus mucosus DSM 2162]
gi|319753652|gb|ADV65410.1| LSU ribosomal protein L10P [Desulfurococcus mucosus DSM 2162]
Length = 335
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 57/114 (50%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
L GQ +FT+ + ++ M D Y + + K G + +++ + EG P + +
Sbjct: 81 LTGQVVAVFTDMNPFELAMLMDKYVTKTYFKPGEKTDKEIVIPEGNTGIPPGPMLSVFGR 140
Query: 156 LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209
L +QT + V+ + KD V K GDV++ + A +L+ L + + ++ L Y+
Sbjct: 141 LKIQTKVQGNVIYVAKDTVVAKPGDVVSSDLASLLQKLGLALKEIRLRPKLAYD 194
>gi|323347282|gb|EGA81555.1| Rpp0p [Saccharomyces cerevisiae Lalvin QA23]
Length = 312
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKXVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|37359627|emb|CAD29995.1| ribosomal P0 protein [Bombyx mori]
Length = 316
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+D ++ N + + +KG G +FT +V + + A+ G I+ V +
Sbjct: 66 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 178
>gi|112982735|ref|NP_001037123.1| ribosomal protein P0 [Bombyx mori]
gi|54609187|gb|AAV34809.1| ribosomal protein P0 [Bombyx mori]
Length = 316
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+D ++ N + + +KG G +FT +V + + A+ G I+ V +
Sbjct: 66 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 178
>gi|91093667|ref|XP_975936.1| PREDICTED: similar to acidic p0 ribosomal protein isoform 3
[Tribolium castaneum]
gi|270008063|gb|EFA04511.1| hypothetical protein TcasGA2_TC016306 [Tribolium castaneum]
Length = 316
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +LV+ +E Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFSKLVQLLEDYPKCFIVGADNVGSKQMQQIRISLRGTAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ E+N + + +KG G +FT +V + A++G I+ V +
Sbjct: 66 KGHCERNPALEKLLPRIKGNVGFVFTRADLVEVRDKLLENKVRAPARAGAIAPLPVVI-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 178
>gi|315131319|emb|CBM69268.1| venom protein Ci-40b [Chelonus inanitus]
Length = 316
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +L++ +E Y F+ N+ + +++ +R + ++ GKN +M K+
Sbjct: 10 KSNYFTKLIQLLEDYPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMR----KAI 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G ++ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLVEVRDKLLENKVRAPARAGAMAPLSVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDRVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|149188585|ref|ZP_01866877.1| fused predicted PTS enzymes Hpr component, enzyme I component, and
enzyme IIA component [Vibrio shilonii AK1]
gi|148837495|gb|EDL54440.1| fused predicted PTS enzymes Hpr component, enzyme I component, and
enzyme IIA component [Vibrio shilonii AK1]
Length = 831
Score = 40.0 bits (92), Expect = 0.90, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAK-SGFISTEDVELKEGPLP-----EFPHSIEPQ 152
C +FT ++ L++F + D + + I T++V+L E PLP P +
Sbjct: 62 HCQFIFTGSDANEALIFFQAFVDTELSHIDNAIDTQNVQLSEQPLPVGLMRAAPRYVRGT 121
Query: 153 LRQLGL---------QTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMA 198
+ +GL QT+L K L + C + ++ + +A L LLKK+ +
Sbjct: 122 VASVGLGEASATLWQQTDLRKMAAALPSQTSSCIESELQSALKALQLNLLKKQAS 176
>gi|237842661|ref|XP_002370628.1| 60S acidic ribosomal protein P0 [Toxoplasma gondii ME49]
gi|28974671|gb|AAO61487.1| ribosomal P protein [Toxoplasma gondii]
gi|211968292|gb|EEB03488.1| 60S acidic ribosomal protein P0 [Toxoplasma gondii ME49]
gi|221485594|gb|EEE23875.1| hypothetical protein TGGT1_029230 [Toxoplasma gondii GT1]
gi|221503027|gb|EEE28737.1| 60S acidic ribosomal protein P0, putative [Toxoplasma gondii VEG]
Length = 314
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
++++ L +EKY + V ++ + ++ D+R + + GKN ++ AL +
Sbjct: 9 DKRKTYFSRLFALLEKYPRVLVVEADHVGSKQMADIRLALRGKAVVLMGKNTMIRTALKQ 68
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ ++EK + +V + G +F +V + A+ G + DV +
Sbjct: 69 KMSEMPQLEKLLPLV----RLNVGFIFCIEDPAEVRRIVAENKVPAPARQGVFAPIDVFI 124
Query: 138 KEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
GP P S + LG+ T + KG + + + + K+GD +T A +L+ L K
Sbjct: 125 PAGPTGMDPGSTS-FFQALGIATKIVKGQIEIQNEVHLIKEGDKVTASAATLLQKLNIKP 183
Query: 198 AKFKVLLYLWYN 209
++ + + Y+
Sbjct: 184 FEYGLAIQHVYD 195
>gi|380690657|gb|AFD93397.1| ribosomal protein P0, partial [Eupoecilia ambiguella]
Length = 301
Score = 40.0 bits (92), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 3 KSNYFVKIVQLLDEYPKCFIVGADNVGSKQMQQIRMSLRGHSIVLMGKNTMMRKAIRGHL 62
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
E+ +EK + HV KG G +FT +V + A+ G I+ V +
Sbjct: 63 ENNPALEKLLPHV-----KGNVGFVFTRGDLVEVREKLLENKVRALARPGAIAPLSVIV- 116
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 117 ----PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 171
>gi|328874599|gb|EGG22964.1| ribosomal acidic phosphoprotein P0 [Dictyostelium fasciculatum]
Length = 702
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 22 RKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKS 80
RK N ++ K YN + + + +++L+ +R + GK ++ +
Sbjct: 403 RKSNFMEKATKLFSTYNKMIIAHADFVGSNQLQKIRVALRGKGAMLMGKKTLVRKCVKSV 462
Query: 81 QEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEG 140
E + E + + LK ++F S ++ AK+G I+ +DV + +G
Sbjct: 463 MESKPE--LESLIPHLKSNTAVIFAKDSLSEIKEIIKKIRVGAPAKAGVIAPQDVHVPKG 520
Query: 141 PLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
P +EP L++L + T +N+G + + D + K G + +A +L+ L K
Sbjct: 521 PT-----GLEPTQVNFLQELKIATKINRGQIDIESDIHLIKTGQKVGASEATLLQKLNIK 575
>gi|78191424|gb|ABB29933.1| P0 ribosomal protein-like [Solanum tuberosum]
gi|82623393|gb|ABB87111.1| P0 ribosomal protein-like [Solanum tuberosum]
Length = 320
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K ++ + ++ + + V + N+ +++L+ +R + DS GKN +M +
Sbjct: 9 EKKIAYDTKMCQLLDDFTQVLVAAADNVGSNQLQSIRKGLRGDSVVLMGKNTMMKRTIRV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + I + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HAEKTGNETILNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
G P + L + T +NKG V + + KKGD + +A +L L +
Sbjct: 129 GNTGLDPSQTS-FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFS 187
Query: 200 FKVLLYLWYN 209
+ +++ Y+
Sbjct: 188 YGLVVVSVYD 197
>gi|207342817|gb|EDZ70463.1| YLR340Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 210
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|22651854|gb|AAM97779.1| ribosomal protein P0 [Aedes albopictus]
Length = 315
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KANYFVKIVQLLDEYPKCFIVGADNVGSRQMQTIRISLRGTAVVLMGKNTMMRKAIRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELK 138
E+ N+ + +KG G +FT K D++ D + A++G I+ +V +
Sbjct: 70 EEN--SNLEKLLPHVKGNVGFVFT---KGDLVEVRDKLMESKVRAPARAGAIAPLEVII- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + + +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASETPLLNML 178
>gi|166952335|gb|ABZ04250.1| ribosomal protein rplp0 [Lineus viridis]
Length = 315
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD---SRFFFGKNKVMAYALGK 79
K N +++K +++Y + S N+ + +++ +R + ++ FGKN +M A+
Sbjct: 10 KSNYFMKIIKLLDEYPRCLLVSADNVGSKQMQSIRANLRNEGAGIILFGKNTMMRKAIRG 69
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
E+ ++EK + LKG G +FT ++ E D S ++
Sbjct: 70 HLENNPQLEKLL----PHLKGNIGFVFTKA---------ELTETRDRVLSHRVAAPAKAG 116
Query: 138 KEGPL----PEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
PL P + P+ + L +QT + KG V + D + G+ + +A +
Sbjct: 117 ALAPLDVTVPRQNTGLGPEKTSFFQALNIQTKITKGTVEIMNDVKLVTAGERVGASEAAL 176
Query: 190 LKLLK 194
L +LK
Sbjct: 177 LNMLK 181
>gi|237862662|gb|ACR24956.1| ribosomal protein P0 [Lepidochitona cinerea]
Length = 189
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ +V N+ + +++ VR + + GKN +M A+
Sbjct: 10 KSNYFLKIVQLMDEYPKKFLVNVDNVGSKQMQIVRQKLRGKAEVLMGKNTMMRKAIRGHI 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+ N+ + +KG G +FT D+ + + A+ G I+ DV++
Sbjct: 70 ENN--PNLEKLLPHIKGNMGFVFTKEDLLDIRAILIENKVQAPARPGAIAPLDVKV---- 123
Query: 142 LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T + KG + + + ++ K+G+ + + +L +L
Sbjct: 124 -PAQNTGLGPEKTSFFQALSIPTKITKGSIEILNEVSLIKEGEKVGASEDTLLNML 178
>gi|146304399|ref|YP_001191715.1| acidic ribosomal protein P0 [Metallosphaera sedula DSM 5348]
gi|145702649|gb|ABP95791.1| LSU ribosomal protein L10P [Metallosphaera sedula DSM 5348]
Length = 329
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 28 DELVKAVEKYNN---IFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED 83
DE+ + EK N + + +Q KL ++R + + KN + A ++ D
Sbjct: 15 DEVAELEEKIKNSSTVMIADIQGFPTDKLHEIRKKLRGKAEIKVTKNTLFLIAAKRAGID 74
Query: 84 EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
+ + + + G +F+N + + ++ ++ + + G + E+V + G
Sbjct: 75 -----VSKIENYITGSNAFIFSNDNPFAISIFLSKFKLKRYPMPGDKADEEVVIPAGDTG 129
Query: 144 EFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
I +L +QT + G V + KD + K GD + PE A IL+ L
Sbjct: 130 MTAGPILSTFGKLKVQTKVQDGKVHVVKDTVIAKPGDPIPPEAAPILQKL 179
>gi|380690659|gb|AFD93398.1| ribosomal protein P0, partial [Lobesia botrana]
Length = 301
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 3 KSNYFVKIVQLLDEYPKCFIVGADNVGSKQMQQIRMSLRGHSIVLMGKNTMMRKAIRGHL 62
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT +V + A+ G I+ V +
Sbjct: 63 ENNPALEK----LLPHIKGNVGFVFTRGDLVEVREKLLENKVRALARPGAIAPLSVIV-- 116
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 117 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 171
>gi|405122031|gb|AFR96799.1| L10e protein [Cryptococcus neoformans var. grubii H99]
Length = 312
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+EKY +IFV ++ N+ + + +R + GKN ++ A+ + + EK +
Sbjct: 19 IEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIRTILPEFPQFEKLMP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FT+ DV + A++G + DV + G +E
Sbjct: 79 FV----KGNIGFVFTSGDLKDVREIIIANKVAAPARAGAFAPNDVYVPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V G + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNISPFTYGMTVVQ 189
Query: 207 WYNKKEGTFENLLD-REKTPMD 227
Y+ ++LD EKT +D
Sbjct: 190 VYDNGAVFPSSILDIEEKTLID 211
>gi|323332404|gb|EGA73813.1| Rpp0p [Saccharomyces cerevisiae AWRI796]
gi|323336373|gb|EGA77641.1| Rpp0p [Saccharomyces cerevisiae Vin13]
gi|323353860|gb|EGA85715.1| Rpp0p [Saccharomyces cerevisiae VL3]
Length = 312
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|310790829|gb|EFQ26362.1| ribosomal protein L10 [Glomerella graminicola M1.001]
Length = 313
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ +V N+ + ++ ++R + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRQSLRGQGVVLMGKNTMVRRALKTFI 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ + A++G ++ DV +
Sbjct: 68 PDSPEYERLLPFV----KGNVGFVFTNGDLKDIRDKILANKVAAPARAGAVAPSDVWIPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEIVSDLKLVEANSKVGPSEATLLNML 176
>gi|374633617|ref|ZP_09705982.1| ribosomal protein L10 [Metallosphaera yellowstonensis MK1]
gi|373523405|gb|EHP68325.1| ribosomal protein L10 [Metallosphaera yellowstonensis MK1]
Length = 331
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 25/218 (11%)
Query: 28 DELVKAVEKYNN---IFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED 83
DE+ EK N + + VQ KL ++R ++ + +N + A ++ D
Sbjct: 15 DEVASLEEKLKNSKTVIIADVQGFPADKLHEIRKKLRNIADMKVTRNTLFLIAAKRAGLD 74
Query: 84 --EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
++EK I G +FTN + + + ++ + + G + E+V + G
Sbjct: 75 VEKLEKYIS-------GTNAFIFTNENPFSISILLSKFKLKRYPMPGDKADEEVVIPAGD 127
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFK 201
I +L +QT + G V + KD + K GD + PE A IL+ K
Sbjct: 128 TGMTAGPILSTFGKLKVQTKVQDGKVHVVKDTLIAKPGDPIPPEAAPILQ-------KLG 180
Query: 202 VL-LYLWYNKKEGTFENLLDREKTPMDIYDMEDDENNS 238
++ +Y+ K ENL+ P D ++ D+ S
Sbjct: 181 IMPVYVKLKLKAAYHENLV----IPSDQLELNVDQYRS 214
>gi|242008432|ref|XP_002425010.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
gi|212508639|gb|EEB12272.1| ribosomal P0 protein, putative [Pediculus humanus corporis]
Length = 324
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K N +L++ +++Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KANYFTKLIQLLDEYPKCFIVGADNVGSKQMQQIRMSLRGTAVVLMGKNTMMRKAI--KG 67
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDE--DFAKSGFISTEDVELKE 139
E+ + + +KG G +FT D V + + E++ AK+G I+ V +
Sbjct: 68 NVEVNQAYEKILPHIKGNVGFVFTK--GDLVEVRNKILENKVRAPAKNGAIAPCAVII-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + L + T ++KG + + D + K+GD + A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALSIPTKISKGTIEITNDVHILKEGDKVGASDATLLNMLNI 180
Query: 196 KMAKFKVLLYLWYN 209
+ +++ + Y+
Sbjct: 181 SPFNYGLVVEMVYD 194
>gi|154757503|gb|AAI51696.1| RPLP0 protein [Bos taurus]
Length = 320
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/189 (18%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + ++G G +FT ++ + +++G I+ +V +
Sbjct: 70 ENNPALEKLL----PHIRGNVGFVFTKEDLTEIRDMLLANKVPAASRAGAIAPCEVTV-- 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
P + P+ + LG+ T +++G + + D + K GD + +A +L +L
Sbjct: 124 ---PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 196 KMAKFKVLL 204
F +++
Sbjct: 181 SPFSFGLVI 189
>gi|288559743|ref|YP_003423229.1| acidic ribosomal protein P0 RplPO [Methanobrevibacter ruminantium
M1]
gi|288542453|gb|ADC46337.1| acidic ribosomal protein P0 RplPO [Methanobrevibacter ruminantium
M1]
Length = 335
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEI- 85
+EL ++ + + ++ N+ +L+++R + K +M AL ED +
Sbjct: 13 NELKGIIDSAEVVGIVNLLNIPARQLQEMRKTLSGKATIRLSKINLMKLAL----EDCVN 68
Query: 86 -EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELKEGP 141
+ NI +S ++GQ L+ T+ + + + ED AK+G I+ ED+ + G
Sbjct: 69 EKANITELSDYMEGQPALVCTDMNP---FRLYKILEDSKTSAPAKAGAIAPEDIVVPAGD 125
Query: 142 LPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
P L+Q+G+ ++KG + + KD TV + G+
Sbjct: 126 TGFPPGPFLGDLQQIGVPAKIDKGKIVVQKDTTVVEAGE 164
>gi|151940865|gb|EDN59247.1| ribosomal protein P0 [Saccharomyces cerevisiae YJM789]
gi|190405388|gb|EDV08655.1| ribosomal protein P0 [Saccharomyces cerevisiae RM11-1a]
Length = 312
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKSVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|62902641|gb|AAY19280.1| acidic ribosomal P0 protein [Moneuplotes minuta]
Length = 333
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 31/194 (15%)
Query: 20 LERKQNLRDELVKAV-EKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALG 78
ER N+ D+ +A+ K +NI + R K++R++ +S G+N ++ AL
Sbjct: 14 FERVYNVFDKYTRALLVKCDNISARQIHACR----KELRSN--NSLMLMGENTLIKAALQ 67
Query: 79 KSQEDEIEK---------------NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDED 123
K IE ++ + LKG G++FTN D+ D + E
Sbjct: 68 KRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREA 127
Query: 124 FAKSGFISTEDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKG 179
A+ G ++ DV +K G ++P+ + L + T + K + + D + +G
Sbjct: 128 PARVGSVAQCDVWIKAGGT-----GLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEG 182
Query: 180 DVLTPEQARILKLL 193
+ + +A +L+ L
Sbjct: 183 EKVGSNEAALLQKL 196
>gi|403282009|ref|XP_003932458.1| PREDICTED: 60S acidic ribosomal protein P0-like [Saimiri
boliviensis boliviensis]
Length = 318
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 19 GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL 77
G K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 6 GATWKSNYFLKIIQLLDGYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65
Query: 78 GKSQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDV 135
E+ +EK + ++G G +FT K+D+ D+ + + +
Sbjct: 66 RGHLENNPALEKLL----PHIRGNAGFVFT---KEDLTEIRDMLLANKVPAAAVLV--PL 116
Query: 136 ELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
+ E +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 117 QHDEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIGILSDVQLIKTGDKVGASEATLLN 176
Query: 192 LLKKKMAKFKVLLYLWYN 209
+L F +++ +N
Sbjct: 177 MLNISPFSFGLVIQQVFN 194
>gi|50546801|ref|XP_500870.1| 60S acidic ribosomal protein P0 [Yarrowia lipolytica]
gi|49646736|emb|CAG83121.1| YALI0B14146p [Yarrowia lipolytica CLIB122]
Length = 314
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIHVV 92
+++Y +IFV V N+ + ++ ++R + + GKN ++ AL + E+E+ + ++
Sbjct: 20 LQEYKSIFVVGVDNVSSQQMHEIRKTLRGRAVVLMGKNTMVRRAL-REFEEELPEAAELL 78
Query: 93 SSALKGQCGLLFTN---RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSI 149
+G G +FTN + +VL+ V A++G I+ +DV ++ P
Sbjct: 79 MPLCRGNVGFVFTNDDLKEIREVLLENRVLAP---ARAGAIAPKDVWIQAAN-TGMPPDK 134
Query: 150 EPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ LG+ T +++G + + D + ++ + P +A +L +L
Sbjct: 135 TSFFQALGVPTKISRGTIEITSDVKILQQDVKVGPSEATLLNML 178
>gi|321261511|ref|XP_003195475.1| 60S acidic ribosomal protein [Cryptococcus gattii WM276]
gi|317461948|gb|ADV23688.1| 60S acidic ribosomal protein, putative [Cryptococcus gattii WM276]
Length = 312
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 17/202 (8%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+EKY +IFV ++ N+ + + +R + GKN ++ A+ + + EK +
Sbjct: 19 IEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIRTILPEFPQFEKLMP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FT+ DV + A++G + DV + G +E
Sbjct: 79 FV----KGNIGFVFTSGDLKDVREIIIANKVAAPARAGAFAPNDVYVPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V G + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNISPFTYGMTVVQ 189
Query: 207 WYNKKEGTFENLLD-REKTPMD 227
Y+ ++LD EKT +D
Sbjct: 190 VYDNGAVFPSSILDIEEKTLVD 211
>gi|323303768|gb|EGA57553.1| Rpp0p [Saccharomyces cerevisiae FostersB]
Length = 312
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|226472998|emb|CAX71185.1| deoxyribonuclease [Schistosoma japonicum]
Length = 317
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDVV-----VPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
+ P+ + L + T + +G + + + +K + + +A +L +LK
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINVVHLVRKDEKVGMSEATLLGMLK 179
>gi|358377962|gb|EHK15645.1| hypothetical protein TRIVIDRAFT_92231 [Trichoderma virens Gv29-8]
Length = 314
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E+Y +IF+ + N+ + ++ ++R+ + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVEIDNVSSQQMHEIRHSLRGKGVVLMGKNTMVRRALRTFV 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN +V A++G ++ DV +
Sbjct: 68 IDTPEYERILPFV----KGNVGFVFTNGDLKEVRDQLLANRVAAPARAGAVAPVDVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + G+ + P +A +L LL
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIDAGNKVGPSEASLLNLLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ + + Y++ + ++LD
Sbjct: 179 SPFTYGMGIAQVYDQGQTFPPSILD 203
>gi|449668830|ref|XP_002154455.2| PREDICTED: 60S acidic ribosomal protein P0-like [Hydra
magnipapillata]
Length = 316
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 4/163 (2%)
Query: 32 KAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEKNIH 90
K ++++ F+ +V N+ + +++ +R + GKN +M AL K++ +I +
Sbjct: 19 KMLDEFPRCFLVTVDNVGSKQMQQIRIALRGKGEVLMGKNTMMRKAL-KAKSQKIP-GLE 76
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
+ L G G +FT +V + AK+G I+ DV + G P
Sbjct: 77 KILPYLVGNIGFIFTKEDLTEVRDLVLSNKKNAPAKAGSIAPLDVFIPAGNTGMGPEKTS 136
Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ L +QT + KG + + D + KK + +A +L +L
Sbjct: 137 -FFQALSIQTKITKGTIEILSDIHLIKKDVKVGASEAALLAML 178
>gi|332018397|gb|EGI58991.1| 60S acidic ribosomal protein P0 [Acromyrmex echinatior]
Length = 318
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV+ ++ + F+ N+ + +++ +R + ++ GKN +M A+
Sbjct: 10 KSNYFTKLVQLLDDFPKCFIVGADNVGSKQMQQIRMSLRGNAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 RGHIERNAALEKLLPHIRGNVGFVFT---RGDLIEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 LKKKMAKFKVLLYLWYNKKEGTFENLLD 220
L + +L+ Y+ +LD
Sbjct: 178 LNISPFSYGLLVEQVYDSGTIFAPEILD 205
>gi|429217478|ref|YP_007175468.1| 50S ribosomal protein L10 [Caldisphaera lagunensis DSM 15908]
gi|429134007|gb|AFZ71019.1| ribosomal protein L10 [Caldisphaera lagunensis DSM 15908]
Length = 338
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 21 ERKQNLRDELVKAVE--KYNNIFVFS-VQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYA 76
E +N R EL +E K +F+ +++M +L+ ++ + ++ F K +++ A
Sbjct: 12 EPPENKRKELEMLIELMKSKKYVIFADLESMPTKQLQLIKKELRNEAIFRVSKKRLVLMA 71
Query: 77 LGKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
L + + N + LK ++ T+ + V M D + AK+G S +++
Sbjct: 72 L-----ERLGLNKEKIEPYLKKGVLVILTDTNPFKVSMMLDKLKMPAPAKAGAQSPKEIV 126
Query: 137 LKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ EG P + +L + + KG + + D V KKGDV++ E A +L+ L
Sbjct: 127 VPEGDTNIRPGPMVSVFGKLKIPYEVRKGTIYIKSDTVVAKKGDVISQELASLLQQL 183
>gi|365759340|gb|EHN01134.1| Rpp0p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840538|gb|EJT43319.1| RPP0-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 312
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
++ + EK + V KG G +FTN D+ A++G ++ ED+ +
Sbjct: 66 FLTELPDFEKLLPFV----KGNVGFVFTNEPLSDIKEVIVSNRLAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G + +A +L LL
Sbjct: 122 R-----AINTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGTRVGQSEAALLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYDHG----------QVFPSSILDITDEE 208
>gi|336274114|ref|XP_003351811.1| 60S acidic ribosomal protein P0 [Sordaria macrospora k-hell]
gi|380096093|emb|CCC06140.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 312
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ SV N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEDYKSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFV 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN ++ + A++G ++ DV +
Sbjct: 68 IDTPEYERLLPFV----KGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPADVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGVKVGPSEATLLNML 176
>gi|346322633|gb|EGX92232.1| 60S acidic ribosomal protein P0 [Cordyceps militaris CM01]
Length = 331
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK-- 79
K D+L +E+Y +IF+ + N+ + ++ ++R+ + + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLEEYKSIFIVEIDNVTSQQMHEIRHSLRGKAVVLMGKNTMVRRALKGFI 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
S E E+ + V KG G +FTN D+ E D + ++
Sbjct: 68 SDTPEYERLLPFV----KGNVGFVFTNE---------DLKEIRDLVLANRVAAPARAGAV 114
Query: 140 GPL----PEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
PL P +EP + L + T + +G + + D + +KG + P +A +L
Sbjct: 115 APLDVWVPAGNTGMEPGKTSFFQALNVPTKIARGTIEITTDLKLIEKGLKVGPSEATLLN 174
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLDREK 223
+L F + + Y++ + ++LD E+
Sbjct: 175 MLNISPFTFGMGVAQVYDEGQCFDPSVLDIEE 206
>gi|6323371|ref|NP_013444.1| ribosomal protein P0 [Saccharomyces cerevisiae S288c]
gi|308153499|sp|P05317.2|RLA0_YEAST RecName: Full=60S acidic ribosomal protein P0; Short=A0; AltName:
Full=L10E
gi|315113308|pdb|3IZS|SS Chain s, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|377656240|pdb|3J16|G Chain G, Models Of Ribosome-Bound Dom34p And Rli1p And Their
Ribosomal Binding Partners
gi|171806|gb|AAA34729.1| ribosomal protein L10e [Saccharomyces cerevisiae]
gi|171808|gb|AAA34730.1| L10e protein [Saccharomyces cerevisiae]
gi|609387|gb|AAB67258.1| Rpl10ep [Saccharomyces cerevisiae]
gi|285813748|tpg|DAA09644.1| TPA: ribosomal protein P0 [Saccharomyces cerevisiae S288c]
gi|323307932|gb|EGA61190.1| Rpp0p [Saccharomyces cerevisiae FostersO]
gi|349580040|dbj|GAA25201.1| K7_Rpp0p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297840|gb|EIW08939.1| Rpp0p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 312
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|302348048|ref|YP_003815686.1| LSU ribosomal protein L10P [Acidilobus saccharovorans 345-15]
gi|302328460|gb|ADL18655.1| LSU ribosomal protein L10P [Acidilobus saccharovorans 345-15]
Length = 344
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 125 AKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTP 184
AK G ++T+D+ + EG P + +L + + KG + + D V KKGDV++P
Sbjct: 115 AKPGQVATKDIVVPEGDTGIRPGPMVSVFGKLKIPYEVRKGTIYIKSDTVVAKKGDVISP 174
Query: 185 EQARILKLL 193
+ A +L+ L
Sbjct: 175 DLASLLQQL 183
>gi|389608133|dbj|BAM17678.1| ribosomal protein LP0 [Papilio xuthus]
Length = 316
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ +++++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFLVGADNVGSTQMQQIRISLRGHSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+D ++ N + + +KG G +FT + D++ D + A+ G I+ V
Sbjct: 66 KDHLDNNPALEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARPGAIAPLSVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|389610635|dbj|BAM18929.1| ribosomal protein LP0 [Papilio polytes]
Length = 317
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 83/181 (45%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ +++++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFLVGADNVGSTQMQQIRISLRGHSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+D ++ N + + +KG G +FT + D++ D + A+ G I+ V
Sbjct: 66 KDHLDNNPALEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARPGAIAPLSVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|302306842|ref|NP_983226.2| 60S acidic ribosomal protein P0 [Ashbya gossypii ATCC 10895]
gi|299788713|gb|AAS51050.2| ACL178Cp [Ashbya gossypii ATCC 10895]
gi|374106431|gb|AEY95340.1| FACL178Cp [Ashbya gossypii FDAG1]
Length = 309
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + GKN ++ A+
Sbjct: 6 EKKSEYFAKLREYLEEYKSVFVVGVDNVSSQQMHEVRKALRGKAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN D+ + A++G ++ ED+ +
Sbjct: 66 FIADFPDYEKLLPFV----KGNVGFVFTNEPLTDIKEVIVANKVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V + G+ + +A +L LL
Sbjct: 122 L-----AVNTGMEPGKTSFFQALGVPTKIARGTIEITSDVKVVEAGNRVGASEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
+ + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTYGLTVVQVYD----------NGQVFPASILDITDEE 208
>gi|171686396|ref|XP_001908139.1| hypothetical protein [Podospora anserina S mat+]
gi|170943159|emb|CAP68812.1| unnamed protein product [Podospora anserina S mat+]
Length = 51
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 1 MPKSKRDKKVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNS 51
MPKSKR K L++ KK E K L + A+ ++ +VFSV NMRN+
Sbjct: 1 MPKSKRAKVYHLTQVSKKTRENKDKLFANIRDAIPEFQYCWVFSVDNMRNN 51
>gi|383624973|ref|ZP_09949379.1| acidic ribosomal protein P0 [Halobiforma lacisalsi AJ5]
gi|448697429|ref|ZP_21698469.1| acidic ribosomal protein P0 [Halobiforma lacisalsi AJ5]
gi|445781382|gb|EMA32238.1| acidic ribosomal protein P0 [Halobiforma lacisalsi AJ5]
Length = 346
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 91/203 (44%), Gaps = 25/203 (12%)
Query: 39 NIFVFSVQNMRNSKLKDVRND-WKDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALK 97
++ + + + + +L+D+R D + + +N + AL ++ D++ ++ +
Sbjct: 32 SVGIVGLTGIPSKQLQDMRRDLYGTAELRVSRNTLQIRALEEAGYDDLVDHV-------E 84
Query: 98 GQCGLLFTNRSKDDVLMWFDVYEDEDFAKS------GFISTEDVELKEGPLPEFPHSIEP 151
G GL+ TN + F +Y++ + +K+ G ++ D+ + EG P
Sbjct: 85 GHVGLIATNDNP------FALYKELEASKTPAPINEGEVAPNDIVIPEGDTGVDPGPFVG 138
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKK 211
+L+ +G + G + + +D TV + G+ ++ + A +L L + +V L L
Sbjct: 139 ELQGIGANARIEDGSIQVMEDSTVLEAGEEVSADLANVLNEL--GIEPKEVGLDLRAVVA 196
Query: 212 EGTFENLLDREKTPMDIYDMEDD 234
EG L D E +D+ E D
Sbjct: 197 EGV---LFDPEDLDIDVEAYESD 216
>gi|256270289|gb|EEU05505.1| Rpp0p [Saccharomyces cerevisiae JAY291]
gi|259148317|emb|CAY81564.1| Rpp0p [Saccharomyces cerevisiae EC1118]
gi|365764143|gb|EHN05668.1| Rpp0p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 312
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|209736184|gb|ACI68961.1| 60S acidic ribosomal protein P0 [Salmo salar]
gi|209738630|gb|ACI70184.1| 60S acidic ribosomal protein P0 [Salmo salar]
gi|223646316|gb|ACN09916.1| 60S acidic ribosomal protein P0 [Salmo salar]
gi|223672163|gb|ACN12263.1| 60S acidic ribosomal protein P0 [Salmo salar]
Length = 315
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFMKIIQLLDDYPKCFIVGADNVGSKQMQAIRLSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT D+ E D + +
Sbjct: 70 ENNPALEK----LLPHIKGNVGFVFTKE---------DLAEIRDMLLANKVPAAARAGAI 116
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 117 APCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVMLIKPGDKVGASEATLLN 176
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+L F +L+ Y+ +LD
Sbjct: 177 MLNISPFSFGLLIQQVYDNGSVYSPEVLD 205
>gi|355566426|gb|EHH22805.1| hypothetical protein EGK_06137 [Macaca mulatta]
Length = 307
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/187 (18%), Positives = 80/187 (42%), Gaps = 12/187 (6%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y FV N+ + +++ +R + + GKN +M A+
Sbjct: 10 KPNPFLKIIQLLDDYLKCFVVGADNVSSKQMQQIRMSLRGKAVVLMGKNAMMCKAVRGHL 69
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP 141
E+ + + +G G +FT ++ + +G I+ +V +
Sbjct: 70 ENS--PALEKLLPRFQGNVGFVFTEEDLTEITDMLLASKVPAATHAGAITPCEVTV---- 123
Query: 142 LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKM 197
P + P+ + LG+ T +++G + + D + K GD + +A++L +L
Sbjct: 124 -PAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKMGDKVGASEAKLLTMLNISP 182
Query: 198 AKFKVLL 204
F +++
Sbjct: 183 FSFGLVI 189
>gi|197632155|gb|ACH70801.1| acidic ribosomal protein P0 [Salmo salar]
gi|209737932|gb|ACI69835.1| 60S acidic ribosomal protein P0 [Salmo salar]
gi|223647128|gb|ACN10322.1| 60S acidic ribosomal protein P0 [Salmo salar]
gi|223673001|gb|ACN12682.1| 60S acidic ribosomal protein P0 [Salmo salar]
Length = 315
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFMKIIQLLDDYPKCFIVGADNVGSKQMQAIRLSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT D+ E D + +
Sbjct: 70 ENNPALEK----LLPHIKGNVGFVFTKE---------DLAEIRDMLLANKVPAAARAGAI 116
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 117 APCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVMLIKPGDKVGASEATLLN 176
Query: 192 LLKKKMAKFKVLLYLWYNKKEGTFENLLD 220
+L F +L+ Y+ +LD
Sbjct: 177 MLNISPFSFGLLIQQVYDNGSVYSPEVLD 205
>gi|226469646|emb|CAX76653.1| deoxyribonuclease [Schistosoma japonicum]
Length = 170
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 30 LVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKN 88
L K + +++ F+ +V N+R+ +++ +R + ++ GKN +M + K + N
Sbjct: 17 LEKHLSEFDKCFIVNVDNVRSKQMQQIRMALRGNAELVLGKNTLMRKVIQKQMNQD--SN 74
Query: 89 IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHS 148
+ + ++ G +FTN +V + E AK+G I+ DV +P
Sbjct: 75 LEKILPHIRDNVGFVFTNGDLSEVRKTIENNRVEAPAKAGAIAPCDV-----VVPAQNTG 129
Query: 149 IEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKK 178
+ P+ + L + T + +G + + D + +K
Sbjct: 130 LGPEKTAFFQALSIPTKIARGAIEIINDVHLVRK 163
>gi|45357822|ref|NP_987379.1| acidic ribosomal protein P0 [Methanococcus maripaludis S2]
gi|340623441|ref|YP_004741894.1| acidic ribosomal protein P0 [Methanococcus maripaludis X1]
gi|74555884|sp|Q6M0L1.1|RLA0_METMP RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|45047382|emb|CAF29815.1| LSU ribosomal protein L10E [Methanococcus maripaludis S2]
gi|339903709|gb|AEK19151.1| acidic ribosomal protein P0 [Methanococcus maripaludis X1]
Length = 335
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G I+ D+E+K G P +L+ +G+ ++KG + + +D V K+G+V++ +
Sbjct: 118 KGGAIAPCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQK 177
Query: 186 QARILKLL 193
A +L L
Sbjct: 178 LAVVLSAL 185
>gi|77552928|gb|ABA95724.1| 60S acidic ribosomal protein P0, putative, expressed [Oryza sativa
Japonica Group]
gi|125578417|gb|EAZ19563.1| hypothetical protein OsJ_35136 [Oryza sativa Japonica Group]
Length = 320
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y + + N+ +++L+++R + DS GKN ++ +
Sbjct: 9 EKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ K+ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|77548531|gb|ABA91328.1| 60S acidic ribosomal protein P0, putative, expressed [Oryza sativa
Japonica Group]
gi|125533290|gb|EAY79838.1| hypothetical protein OsI_34997 [Oryza sativa Indica Group]
gi|125602086|gb|EAZ41411.1| hypothetical protein OsJ_25933 [Oryza sativa Japonica Group]
Length = 320
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y + + N+ +++L+++R + DS GKN ++ +
Sbjct: 9 EKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ K+ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|125535694|gb|EAY82182.1| hypothetical protein OsI_37384 [Oryza sativa Indica Group]
gi|346703724|emb|CBX24392.1| hypothetical_protein [Oryza glaberrima]
Length = 320
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y + + N+ +++L+++R + DS GKN ++ +
Sbjct: 9 EKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ K+ + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|147918709|ref|YP_687568.1| acidic ribosomal protein P0 [Methanocella arvoryzae MRE50]
gi|110622964|emb|CAJ38242.1| 50S ribosomal protein L10E [Methanocella arvoryzae MRE50]
Length = 304
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 27 RDELVKAVEKYNNIFVFSVQNMR----NSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQE 82
+DE+ K V+ ++ V + ++R +S K RN +N + A E
Sbjct: 18 KDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAFDSLPE 77
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
E K + + + GQ +++TN + + + + + AK G I+ D+ + +GP
Sbjct: 78 GEKAKEL---AKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + + +Q+G+ + G V + TV K+G+ ++ + A L L
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAEALTRL 185
>gi|428175311|gb|EKX44202.1| large subunit ribosomal protein P0, cytoplasmic [Guillardia theta
CCMP2712]
Length = 323
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD---SRFFFGKNKVMAYAL 77
+RK + L + + + S N+ + ++ VR+ + + GKN ++ + +
Sbjct: 12 DRKLKYAERLETLLATLPKVLIISADNVGSQQMHIVRSKLRKDPKAEILMGKNTMIKFVI 71
Query: 78 GKSQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
+ + ++ +K CGL+FT+ V + AK+G ++ +DV L
Sbjct: 72 RRYASSSGNSTFNRLADLVKLNCGLVFTDADVKKVRSILQENKVVAAAKAGAVAPKDVFL 131
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ GP S+EP + LG+ T + KG + + K + K G+ + +A ++ L
Sbjct: 132 EAGP-----TSLEPTQTGFFQALGIATKITKGNIEVIKQVQLAKVGEKVGSSEAVLMGKL 186
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLD 220
K +F +++ ++ + ++LD
Sbjct: 187 GLKPFEFGLIVTKLFDGESVIDPSVLD 213
>gi|435852446|ref|YP_007314032.1| ribosomal protein L10 [Methanomethylovorans hollandica DSM 15978]
gi|433663076|gb|AGB50502.1| ribosomal protein L10 [Methanomethylovorans hollandica DSM 15978]
Length = 342
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/153 (18%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFGKNKVMAYALGKSQEDEIEK 87
+E+ + ++ Y+ + ++ + +L+ +R D + + KV L K +E+++
Sbjct: 19 EEIKELIKTYHLFGIVGIEGIPAKQLQKMRRDLNGTAYI----KVARNTLIKRALEEMDQ 74
Query: 88 NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPH 147
++ +S + Q L+F++++ + + + K+G ++ +D+ ++ P P
Sbjct: 75 DVKDMSEFIDVQTALIFSDQNPFKLFKLLEKSKTPSPIKAGAVAPKDIVVEARPTSFPPG 134
Query: 148 SIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD 180
I L++ G+ ++ G V + + TV K+G+
Sbjct: 135 PILGDLQRAGIPAAIDGGKVVVKETKTVLKEGE 167
>gi|70990816|ref|XP_750257.1| 60S ribosomal protein P0 [Aspergillus fumigatus Af293]
gi|66847889|gb|EAL88219.1| 60S ribosomal protein P0 [Aspergillus fumigatus Af293]
Length = 313
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--E 84
D+L +++Y +F+ V N+ + ++ ++R + + GKN ++ A+ D E
Sbjct: 13 DKLKSLLDEYKTVFIVGVDNVSSQQMHEIRLALRGQAVVLMGKNTMVRRAIKGFVADNPE 72
Query: 85 IEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
E+ + HV KG G +FTN DV A++G I+ DV + G
Sbjct: 73 YERLLPHV-----KGNVGFIFTNGDLKDVKTKILANRVAAPARAGAIAPADVWVPAG--- 124
Query: 144 EFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
+EP + LG+ T + +G + + D + + G + P +A +L +L
Sbjct: 125 --NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFT 182
Query: 200 FKVLLYLWYNKKEGTFENLLDREKT 224
+ + + Y+ + ++LD E++
Sbjct: 183 YGMTITQVYDNGQCFPAHVLDIEES 207
>gi|242205902|ref|XP_002468808.1| 60S acidic ribosomal protein P0 [Postia placenta Mad-698-R]
gi|220732193|gb|EED86031.1| 60S acidic ribosomal protein P0 [Postia placenta Mad-698-R]
Length = 315
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNI- 89
V KY +IFV +V N+ ++++ +R + GKN ++ AL S+ + E+ +
Sbjct: 19 VAKYPSIFVVNVDNVGSNQMHQIRVALRGKGIVVMGKNTMVRRALRSILSEYPQFERLLP 78
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEF 145
HV +G G +FT+ D+ E D + ++ P +P
Sbjct: 79 HV-----RGNIGFVFTSG---------DLKEIRDIITANKVAAPARAGALAPKDVFIPAG 124
Query: 146 PHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V G + P +A +L +L
Sbjct: 125 NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVFAGTRVGPSEATLLNML 176
>gi|440634718|gb|ELR04637.1| 60S acidic ribosomal protein P0 [Geomyces destructans 20631-21]
Length = 312
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K + D+L +E+Y +IF+ SV N+ + ++ ++R + + GKN ++ A+
Sbjct: 8 KASYFDKLKGLLEEYRSIFIVSVDNVSSQQMHEIRQSLRGEGVVLMGKNTMVRRAIKGFV 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN D+ + A++G ++ +DV +
Sbjct: 68 GDSPEWERLLPFV----KGNIGFVFTNSDLKDIRDKILANKVAAPARAGAVAPDDVFVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G +EP + LG+ T + +G + + D + + G + +A +L +L
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGTKVGASEATLLNML 176
>gi|315113583|pdb|3O5H|M Chain M, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|4371|emb|CAA30029.1| unnamed protein product [Saccharomyces cerevisiae]
gi|218396|dbj|BAA00415.1| acidic ribosomal protein A0 [Saccharomyces cerevisiae]
gi|22022642|emb|CAA31703.1| ribosomal protein A0 [Saccharomyces cerevisiae]
Length = 312
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDE 235
F + + Y+ + + P I D+ D+E
Sbjct: 177 NISPFTFGLTVVQVYD----------NGQVFPSSILDITDEE 208
>gi|367013154|ref|XP_003681077.1| 60S acidic ribosomal protein P0 [Torulaspora delbrueckii]
gi|359748737|emb|CCE91866.1| hypothetical protein TDEL_0D02820 [Torulaspora delbrueckii]
Length = 312
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y +IF+ V N+ + ++ VR + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSIFIVGVDNVASQQMHQVRKALRGRGVVLMGKNTMVRRAIRG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
S+ + EK + V KG G +FTN S D+ + A++G ++ ED+ +
Sbjct: 66 FVSELPDYEKLLPFV----KGNVGFVFTNESLKDIKEVIIENKVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V + G+ + +A +L LL
Sbjct: 122 T-----AMNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEAGNRVGQSEASLLNLL 176
>gi|302685369|ref|XP_003032365.1| 60S acidic ribosomal protein P0 [Schizophyllum commune H4-8]
gi|300106058|gb|EFI97462.1| hypothetical protein SCHCODRAFT_85263 [Schizophyllum commune H4-8]
Length = 311
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K ++L + ++++ +IF+ +V N+ ++++ +R + GKN ++ AL
Sbjct: 6 EQKAAYFEKLKELLQQFPSIFIVNVDNVGSNQMHQIRVALRGKGVVLMGKNTMVRRALRS 65
Query: 80 --SQEDEIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVE 136
S+ + EK + HV KG G +FT D+ E D + ++
Sbjct: 66 FLSELPQFEKLLPHV-----KGNIGFVFTAG---------DLKEIRDLIIANKVAAPARA 111
Query: 137 LKEGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
P +P +EP + LG+ T + +G + + D V G + P +A
Sbjct: 112 GAYAPKDVSIPAGNTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGTRVGPSEAT 171
Query: 189 ILKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
+L +L + + + Y+ ++LD +++
Sbjct: 172 LLNMLNISPFTYGMTVVQIYDSGNTFSPDVLDVDES 207
>gi|242080463|ref|XP_002445000.1| hypothetical protein SORBIDRAFT_07g002560 [Sorghum bicolor]
gi|241941350|gb|EES14495.1| hypothetical protein SORBIDRAFT_07g002560 [Sorghum bicolor]
Length = 319
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +++Y + + N+ + +L+D+R + DS GKN ++ +
Sbjct: 9 EKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKA 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|167044464|gb|ABZ09139.1| putative ribosomal protein L10 [uncultured marine crenarchaeote
HF4000_APKG6J21]
Length = 325
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFG-KNKVMAYALGKSQEDEIEKNIHVVSS 94
KYN + ++ +R S+L +R G K+K+ +L K IEK +
Sbjct: 25 KYNVTALVRMEKVRASQLLPLRKKLLGEVEIIGIKDKIARKSLEKLDMPGIEK----MKE 80
Query: 95 ALKGQCGLLFTNRS---------KDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
L GQC +FTN S K+ VL+ A+ G I++ DV +
Sbjct: 81 KLTGQCLFMFTNMSPFKLNVLLGKNKVLLK---------ARGGDIASIDVVVPPKNTGIA 131
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
P + + ++ + T +++G + + K+ T KKG+ ++ + A +L L K + +++L
Sbjct: 132 PGPMLTEFKENKIPTKIDQGTIWILKETTPVKKGEPISTKLAALLGKLDIKPIEAQIVL 190
>gi|449540331|gb|EMD31324.1| hypothetical protein CERSUDRAFT_100519 [Ceriporiopsis subvermispora
B]
Length = 313
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNI- 89
V KY +IFV +V N+ ++++ +R + GKN ++ AL ++ + EK +
Sbjct: 19 VAKYPSIFVVNVDNVGSNQMHQIRVALRAKGVVVMGKNTMVRRALRSILTEYPQFEKLLP 78
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEF 145
HV +G G +FT+ D+ E D + ++ P +P
Sbjct: 79 HV-----RGNIGFVFTSG---------DLKEIRDIITANKVAAPARAGALAPKDVTIPAG 124
Query: 146 PHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V G + P +A +L +L
Sbjct: 125 NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVKVVTAGLRVGPSEATLLNML 176
>gi|380690641|gb|AFD93389.1| ribosomal protein P0, partial [Cydia pomonella]
Length = 301
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++V+ +++Y F N+ + +++ VR + S GKN +M A+
Sbjct: 3 KSNYFVKIVQLLDEYPKCFXVGADNVGSKQMQQVRMSLRGHSIVLMGKNTMMRKAIRGHL 62
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + +KG G +FT +V + A+ G I+ V +
Sbjct: 63 ENNPALEKLL----PHIKGNVGFVFTRGDLVEVREKLLENKVRALARPGAIAPLSVIV-- 116
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 117 ---PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 171
>gi|443690429|gb|ELT92567.1| hypothetical protein CAPTEDRAFT_167366, partial [Capitella teleta]
Length = 320
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQED--EI 85
+L++ +++Y F+ V N+ + +++ +R + GKN +M A+ E+ +
Sbjct: 16 KLIELIDEYPKCFLVGVDNVGSKQMQQIRIALRGHGVVLMGKNTMMRKAIRSHLENNPSL 75
Query: 86 EKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE---GPL 142
EK ++ + KG G +FT +V AK+G ++ V + G
Sbjct: 76 EKLLNYI----KGNVGFVFTKGDLTEVRKIIQENRVGAPAKAGALAPLSVMVTARNTGLG 131
Query: 143 PEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
PE + L + T + KG + + D + K+G+ + +A +L +LK + +
Sbjct: 132 PEKTSFFQ----ALAIPTKITKGTIEILNDVQLIKEGEKVGASEATLLTMLKIMPFSYGL 187
Query: 203 LLYLWYNKKEGTFENLLD 220
++ Y+ ++LD
Sbjct: 188 VIQQVYDSGTVFHPSILD 205
>gi|315115359|gb|ADT80652.1| ribosomal protein P0 [Euphydryas aurinia]
Length = 316
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ +++Y F+ N+ + +++ +R + S GKN +M A+
Sbjct: 10 KTNYFTKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+D +E N + + +KG G +FT + D++ D + A+ G I+ V
Sbjct: 66 KDHLETNPALEKLLPHIKGNVGFVFT---RGDLVEVRDKLLENKVRAPARPGAIAPLAVV 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D K GD + +A +L +
Sbjct: 123 I-----PAHNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHFLKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|452842237|gb|EME44173.1| hypothetical protein DOTSEDRAFT_71859 [Dothistroma septosporum
NZE10]
Length = 315
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 20/213 (9%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L +E Y +IF+ +V N+ + ++ ++R + GKN ++ AL Q
Sbjct: 8 KAGYFDKLKGLLEDYKSIFIVTVDNVSSQQMHEIRISLRGQGVVLMGKNTMVRRALRTFQ 67
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
D E E+ + HV KG G +FTN + A++G ++ DV +
Sbjct: 68 PDFPEYERLLPHV-----KGNVGFIFTNGDLKETREKILANRVAAPARAGAVAPADVYIP 122
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
G +EP + LG+ T + +G + + D + + G + +A +L +L
Sbjct: 123 AG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGSKVGASEATLLNMLN 177
Query: 195 KKMAKFKVLLYLWYNKKEGTFE-NLLDREKTPM 226
+ + + Y++ + TF+ ++LD E++ +
Sbjct: 178 ISPFTYGMGIAQIYDQGQ-TFDVSVLDIEESQL 209
>gi|134046441|ref|YP_001097926.1| acidic ribosomal protein P0 [Methanococcus maripaludis C5]
gi|166223882|sp|A4FZS8.1|RLA0_METM5 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|132664066|gb|ABO35712.1| LSU ribosomal protein L10P [Methanococcus maripaludis C5]
Length = 335
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G ++ D+E+K G P +L+ +GL ++KG + + +D V K+G+V++ +
Sbjct: 118 KGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQK 177
Query: 186 QARILKLLKKK 196
+ +L L K
Sbjct: 178 LSVVLSALGIK 188
>gi|347842508|emb|CCD57080.1| similar to 60S acidic ribosomal protein P0 [Botryotinia fuckeliana]
Length = 312
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 24/184 (13%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E K D+L +E+Y +IF+ +V N+ + ++ ++R + + GKN ++ A+
Sbjct: 6 ENKAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRGSLRGEGVVLMGKNTMVRRAVKG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRS----KDDVLMWFDVYEDEDFAKSGFISTE 133
D E E+ + V KG G +FTN+ +D +L D +
Sbjct: 66 FVNDNPEYERLLPFV----KGNVGFVFTNQDLKTIRDKIL---------DNKVAAPARAG 112
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
V + +P +EP + LG+ T + +G + + D + + G + +A +
Sbjct: 113 AVAPADVYVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGSKVGASEATL 172
Query: 190 LKLL 193
L +L
Sbjct: 173 LNML 176
>gi|11499086|ref|NP_070320.1| acidic ribosomal protein P0 [Archaeoglobus fulgidus DSM 4304]
gi|3914775|sp|O28781.1|RLA0_ARCFU RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|2649067|gb|AAB89749.1| LSU ribosomal protein L10E (rpl10E) [Archaeoglobus fulgidus DSM
4304]
Length = 339
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+S DV + EGP P P + +L+ GL + KG V + TV K G+V+ PE AR
Sbjct: 115 VSPVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARA 174
Query: 190 LKLLKKKMAKF 200
L+ L K K
Sbjct: 175 LERLDIKPIKI 185
>gi|156543342|ref|XP_001607606.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nasonia
vitripennis]
Length = 316
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 81/181 (44%), Gaps = 22/181 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRF-FFGKNKVMAYALGKSQ 81
K +L++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KAGYFSKLIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGTAVVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVE 136
+ IE+N + + ++G G +FT + D++ D + A++G I+ V
Sbjct: 66 KGHIERNAALEKLLPHIRGNVGFVFT---RGDLVEVRDKLLENKVRAPARAGAIAPLSVI 122
Query: 137 LKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKL 192
+ P + P+ + L + T ++KG + + D + K GD + +A +L +
Sbjct: 123 I-----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 177
Query: 193 L 193
L
Sbjct: 178 L 178
>gi|58269216|ref|XP_571764.1| L10e protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134114437|ref|XP_774147.1| 60S acidic ribosomal protein P0 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256780|gb|EAL19500.1| hypothetical protein CNBG4470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228000|gb|AAW44457.1| L10e protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 312
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNIH 90
+EKY +IFV ++ N+ + + +R + GKN ++ A+ + + EK +
Sbjct: 19 IEKYPSIFVVNIDNVSSQQCHMIRQALRGKGVVLMGKNTMVRRAIRTILPEFPQFEKLMP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FT+ DV + A++G + DV + G +E
Sbjct: 79 FV----KGNIGFVFTSGDLKDVREIIISNKVAAPARAGAFAPNDVYVPAG-----NTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYL 206
P + LG+ T + +G + + D V G + P +A +L +L + + +
Sbjct: 130 PGKTSFFQALGIPTKIARGTIEIVSDVQVVAAGSKVGPSEATLLNMLNISPFTYGMTVVQ 189
Query: 207 WYNKKEGTFENLLD-REKTPMD 227
Y+ +LD EKT +D
Sbjct: 190 VYDNGAVFPSAILDIEEKTLVD 211
>gi|365767335|pdb|3U5I|QQ Chain q, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
gi|410562521|pdb|4B6A|QQ Chain q, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
Length = 312
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E+K +L + +E+Y ++FV V N+ + ++ +VR + + + GKN ++ A+
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRG 65
Query: 80 SQED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
D + EK + V KG G +FTN ++ A++G ++ ED+ +
Sbjct: 66 FLSDLPDFEKLLPFV----KGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ +EP + LG+ T + +G + + D V G+ + +A +L LL
Sbjct: 122 R-----AVNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLL 176
Query: 194 KKKMAKFKVLLYLWYNKKE 212
F + + Y+ +
Sbjct: 177 NISPFTFGLTVVQVYDNGQ 195
>gi|330038553|ref|XP_003239629.1| 60S acidic ribosomal protein P0 [Cryptomonas paramecium]
gi|327206553|gb|AEA38731.1| 60S acidic ribosomal protein P0 [Cryptomonas paramecium]
Length = 257
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDW-KDSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSS 94
KYN + + + N+ + ++++ + + K+S F KN ++ L KS + +++I + S
Sbjct: 23 KYNRVLLVDLTNVNSFQIQNCKKSFDKNSVLIFQKNSLIRKIL-KSYANN-KQDIDLFCS 80
Query: 95 ALKGQCGLLFTNRSK---DDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEP 151
+ G GL+F+ + +++L VY K G +S DV + G P S
Sbjct: 81 FVSGNVGLIFSKLNPFEINEILESNKVYAS---PKLGQVSHCDVVIPAGQTEMLPDS-TS 136
Query: 152 QLRQLGLQTNLNKGVVTLFKDHTVCKKG 179
+ L +QT + KG + + + KKG
Sbjct: 137 LFQSLNIQTKIQKGQIEILSPVNLLKKG 164
>gi|257076139|ref|ZP_05570500.1| acidic ribosomal protein P0 [Ferroplasma acidarmanus fer1]
Length = 318
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 13/157 (8%)
Query: 42 VFSVQNMRNSKLKDVRNDWKDSRFFFGKNKV---MAYALGKSQEDEIEKNIHVVSSALKG 98
V S++ +RN + + +R+D + GK K+ A L + + +KNI ++ G
Sbjct: 27 VISIKGLRNKEFQKIRSDIR------GKVKIEVLRARLLRLALQKSNKKNIAGMTEHATG 80
Query: 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL--KEGPLPEFPHSIEPQLRQL 156
Q L+ T+ + V + A+ G I+ ED+ + KE P P + ++
Sbjct: 81 QIALITTSETPKTVYDMLVSKRTKAAARGGEIAEEDIIIEPKETSFP--PGPMISVFQKA 138
Query: 157 GLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
G+ + KG + + + T+ KKG+V++ E+A++L+ L
Sbjct: 139 GIPAGIEKGKIVIKSEVTLVKKGEVISKEKAQVLEKL 175
>gi|10642|emb|CAA46199.1| ribosomal PO protein [Trypanosoma cruzi]
Length = 321
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 18/185 (9%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK 79
E K+ + + KY + + N+R+ ++ DVR D + GK + + +
Sbjct: 6 EAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVER 65
Query: 80 SQE-------DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFIST 132
E D++ N + L G L+FTN + D + + A+ G S
Sbjct: 66 RAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVG-ASP 124
Query: 133 EDVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
DV +P +EP+ + L + T + KG V + D V GD + A
Sbjct: 125 CDV-----IVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSAGDRVDNSTAT 179
Query: 189 ILKLL 193
+L+ L
Sbjct: 180 LLQKL 184
>gi|395332162|gb|EJF64541.1| 60S acidic ribosomal protein P0 [Dichomitus squalens LYAD-421 SS1]
Length = 311
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 26/172 (15%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQEDEIEKNI- 89
V KY +IF+ +V N+ ++++ +R + GKN ++ AL + + E+ +
Sbjct: 19 VAKYPSIFLVNVDNVGSNQMHQIRVALRGKGIVVMGKNTMVRRALRSILGEYPQFERLLP 78
Query: 90 HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGP----LPEF 145
HV KG G +FT+ D+ E D + ++ P +P
Sbjct: 79 HV-----KGNIGFVFTSG---------DLKEVRDIITANKVAAPARAGALAPKDVTIPAG 124
Query: 146 PHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+EP + LG+ T + +G + + D V G + P +A +L +L
Sbjct: 125 NTGMEPGKTSFFQALGIPTKIARGTIEIVSDVQVVTAGTRVGPSEATLLNML 176
>gi|167045419|gb|ABZ10074.1| putative ribosomal protein L10 [uncultured marine crenarchaeote
HF4000_APKG10F15]
Length = 354
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 36 KYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFG-KNKVMAYALGKSQEDEIEKNIHVVSS 94
KYN + ++ +R S+L +R G K+K+ +L K IEK +
Sbjct: 25 KYNVTALVRMEKVRASQLLPLRKKLLGEVEIIGIKDKIARKSLEKLDIPGIEK----MKE 80
Query: 95 ALKGQCGLLFTNRS---------KDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
L GQC +FTN S K+ VL+ A+ G I++ DV +
Sbjct: 81 KLTGQCLFMFTNMSPFRLNVLLGKNKVLLN---------ARGGDIASIDVIVPPKNTGIA 131
Query: 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
P + + ++ + T +++G + + K+ T KKG+ ++ + A +L L K + +++L
Sbjct: 132 PGPMLTEFKENKIPTKIDQGTIWILKETTPVKKGEPISTKLAALLGKLDIKPIEARIVL 190
>gi|115474653|ref|NP_001060923.1| Os08g0130500 [Oryza sativa Japonica Group]
gi|730580|sp|P41095.3|RLA0_ORYSJ RecName: Full=60S acidic ribosomal protein P0
gi|315113295|pdb|3IZR|SS Chain s, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|455401|dbj|BAA04668.1| acidic ribosomal protein P0 [Oryza sativa Japonica Group]
gi|29467534|dbj|BAC66723.1| 60S acidic ribosomal protein P0 [Oryza sativa Japonica Group]
gi|113622892|dbj|BAF22837.1| Os08g0130500 [Oryza sativa Japonica Group]
gi|215694045|dbj|BAG89244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L + +++Y + + N+ +++L+++R + DS GKN ++ +
Sbjct: 9 EKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ K + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 HADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKGD V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKL 181
>gi|9581861|gb|AAF89102.1|AF199442_4 ribosomal protein L10 [Methanococcoides burtonii]
Length = 266
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%)
Query: 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGL 158
Q L+FT ++ + + + K+G ++T D+ +++GP P I ++ G+
Sbjct: 15 QTALIFTKQNPFKLYKLLEKSKTPSPIKAGMVATSDIIVEKGPTSFPPGPILGDMQGAGI 74
Query: 159 QTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
++ G V + + V K G+V++ + A +L L+
Sbjct: 75 PAAIDGGKVVIKETKAVAKAGEVVSQKLAAMLTRLE 110
>gi|229002132|dbj|BAH57858.1| 60S acidic ribosomal protein P0 [Babesia rodhaini]
Length = 311
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFF-GKNKVMAYALGK 79
+KQ D+LV VE + I + + N+ + +L +R+ + + GKN +M AL
Sbjct: 8 AKKQAYVDKLVNLVESHPQILIVNADNVSSRQLATIRHSLRGKAYIIMGKNTMMRRALSF 67
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ +V+ +K G + ++ A+ G I+ DV +
Sbjct: 68 V---NLSTEANVLMPHVKLNVGFVVCIADPVEIRSIILQNRVPAPARQGVIAPCDVFVPS 124
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
GP P S + LG+ T + KG + + D + K + ++ A +L+ L
Sbjct: 125 GPTGMDP-SQTSFFQALGISTKIFKGQIEIQSDVHLIKANEKVSASSATLLQKL 177
>gi|159905081|ref|YP_001548743.1| acidic ribosomal protein P0 [Methanococcus maripaludis C6]
gi|238686939|sp|A9A838.1|RLA0_METM6 RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|159886574|gb|ABX01511.1| ribosomal protein L10 [Methanococcus maripaludis C6]
Length = 335
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/158 (19%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 40 IFVFSVQNMRNSKLKDVRNDWKDSRFF-FGKNKVMAYALGKSQEDEIEKNIHVVSSALKG 98
I + + + +L+++R+ +D +N +M A+ + E+ ++ L
Sbjct: 31 IALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPEFAKLADYLDK 90
Query: 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGL 158
++ T + + D + K G + D+E+K G P +L+ +G+
Sbjct: 91 GAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGPFLSELKAVGI 150
Query: 159 QTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK 196
++KG + + +D V K+G+V++ + A +L L K
Sbjct: 151 PAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLSALGIK 188
>gi|156031005|ref|XP_001584828.1| 60S acidic ribosomal protein P0 [Sclerotinia sclerotiorum 1980
UF-70]
gi|154700674|gb|EDO00413.1| 60S acidic ribosomal protein P0 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 312
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
+ K D+L +E+Y +IF+ +V N+ + ++ ++R + + GKN ++ A+
Sbjct: 6 DNKAGYFDKLKGLLEEYKSIFIVTVDNVSSQQMHEIRGSLRGEGVVLMGKNTMVRRAVKG 65
Query: 80 --SQEDEIEKNIHVVSSALKGQCGLLFTNRS----KDDVLMWFDVYEDEDFAKSGFISTE 133
++ E E+ + V KG G +FTN+ +D +L D +
Sbjct: 66 FIAENPEYERLLPFV----KGNVGFVFTNQDLKTIRDKIL---------DNKVAAPARAG 112
Query: 134 DVELKEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
V + +P +EP + LG+ T + +G + + D + + G + +A +
Sbjct: 113 AVAPADVYVPAGNTGMEPGKTSFFQALGVPTKIARGTIEITADLKLVEAGSKVGASEATL 172
Query: 190 LKLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKT 224
L +L + + + Y+ ++LD E++
Sbjct: 173 LNMLNISPFTYGMGISQVYDAGNTFPPSVLDIEES 207
>gi|3914776|sp|O52705.1|RLA0_METTL RecName: Full=Acidic ribosomal protein P0 homolog; AltName:
Full=L10E
gi|2895648|gb|AAC64511.1| ribosomal protein L10 [Methanothermococcus thermolithotrophicus]
Length = 338
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G ++ D+E+K G P +L+ +G+ + KG + + +D V K G+V++ +
Sbjct: 118 KGGAVAPCDIEVKAGSTGMPPGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHK 177
Query: 186 QARILKLLKKKMAKFKVLLYLWY 208
A +L L K + L Y
Sbjct: 178 LAVVLSALGIKPVTVGLNLLAAY 200
>gi|50344446|emb|CAH04309.1| acidic p0 ribosomal protein [Carabus granulatus]
Length = 202
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 87/202 (43%), Gaps = 32/202 (15%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +L++ E Y F+ N+ + +++ +R + ++ GKN +M A+
Sbjct: 10 KANYFLKLIQLFEDYPKCFIVGADNVGSKQMQQIRMSLRGNAIVLMGKNTMMRKAI---- 65
Query: 82 EDEIEKN--IHVVSSALKGQCGLLFTNRSKDDVLMWFD-VYEDEDFAKSGFISTEDVELK 138
+ +E+N + + ++G G +FT + D++ D + E++ A + +
Sbjct: 66 KGHVERNQALEKILPHIRGNVGFVFT---RGDLVEVRDKLLENKVRAPA----------R 112
Query: 139 EGPLPEFPHSIEPQLRQLG-----------LQTNLNKGVVTLFKDHTVCKKGDVLTPEQA 187
G + P I Q LG + T ++KG + + D + K GD + +A
Sbjct: 113 PGAIAPCPVIIPAQNTGLGPEKTSFFQAXSIPTKISKGTIEIINDVHILKPGDKVGASEA 172
Query: 188 RILKLLKKKMAKFKVLLYLWYN 209
+L +L + +L+ Y+
Sbjct: 173 TLLNMLNISPFSYGLLVGQVYD 194
>gi|328863558|gb|EGG12657.1| hypothetical protein MELLADRAFT_73814 [Melampsora larici-populina
98AG31]
Length = 310
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 26 LRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGK--SQE 82
LRD + ++ + F+ +V N+ ++++ +R + GKN ++ A+ ++
Sbjct: 15 LRDLM----AEFPSAFIVNVDNVGSNQMHQIRQALRGKGIVLMGKNTMVRRAIRGVLAEN 70
Query: 83 DEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142
+ E+ + +V KG G +FT+ D+ E D S ++ PL
Sbjct: 71 PQYERLLPLV----KGNIGFVFTSG---------DLKEVRDIITSNKVAAPAKAGAFAPL 117
Query: 143 ----PEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P +EP + LG+ T + +G + + D + G + +A +L LLK
Sbjct: 118 DVMVPAGNTGMEPGKTSFFQALGIPTKIQRGTIEIVSDIKIVTAGSRVGASEATLLNLLK 177
Query: 195 KKMAKFKVLLYLWYNKKEGTFENLLDR-EKTPMD 227
+ + + + Y+ ++LD EKT +D
Sbjct: 178 ISPFTYGMTVQMIYDNGNIFAPSVLDIDEKTLID 211
>gi|6911249|gb|AAF31449.1|AF220939_1 60S acidic ribosomal protein P0 [Sarcophaga crassipalpis]
Length = 316
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 30 LVKAVEKYNN---IFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEI 85
+K VE +N FV N+ + +++ +R + GKN +M A+ +
Sbjct: 14 FIKVVELFNEYPKCFVVGADNVGSRQMQTIRTSLRGMGVVLMGKNTMMRKAI----RGHL 69
Query: 86 EKNIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143
E+N + + +KG G +FT +V + A++G I+ V + P
Sbjct: 70 EQNAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVII-----P 124
Query: 144 EFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAK 199
+ P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 125 AQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFS 184
Query: 200 FKVLLYLWYNKKEGTFENLLD 220
+ +++ Y+ +LD
Sbjct: 185 YGLIINQVYDSGSIFSPEILD 205
>gi|327358527|gb|AEA51110.1| 60S acidic ribosomal protein P0 [Oryzias melastigma]
Length = 299
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/226 (19%), Positives = 91/226 (40%), Gaps = 26/226 (11%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFMKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNI-HVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELK 138
E+ +EK + H+ KG G +FT D+ E D + +
Sbjct: 70 ENNPALEKLLPHI-----KGNAGFVFTKE---------DLAEVRDMLLANKVPAAARAGA 115
Query: 139 EGP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
P +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 116 IAPCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVGLIKTGDKVGASEATLL 175
Query: 191 KLLKKKMAKFKVLLYLWYNKKEGTFENLLDREKTPMDIYDMEDDEN 236
+L F +++ Y+ +LD + + +E N
Sbjct: 176 NMLNISPFSFGLIIQQVYDNGSVYSPEVLDITEASLQARFLEGVRN 221
>gi|333910817|ref|YP_004484550.1| 50S ribosomal protein L10 [Methanotorris igneus Kol 5]
gi|63109222|gb|AAY33767.1| ribosomal protein L10 [Methanotorris igneus]
gi|333751406|gb|AEF96485.1| ribosomal protein L10 [Methanotorris igneus Kol 5]
Length = 342
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G I+ D+++++G P +L+ +G+ + KG + + +D V K G+V++ +
Sbjct: 119 KGGAIAPCDIKVQKGSTGMPPGPFLGELKSVGIPAAIEKGKIVIKEDKVVVKAGEVVSHK 178
Query: 186 QARILKLLKKKMAKFKVLLYLWY 208
A IL L K K + L Y
Sbjct: 179 LATILSTLGIKPIKVGLNLLAAY 201
>gi|6469605|gb|AAF13353.1|AF121339_1 acidic ribosomal phosphoprotein P0 [Eufolliculina uhligi]
Length = 324
Score = 37.4 bits (85), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 17/196 (8%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-- 77
E K + ++L +E+ I + N+ + +L+D+R ++ + FGKN ++ L
Sbjct: 1 EAKYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKH 60
Query: 78 ----GKSQEDEIEKN---------IHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF 124
+++++ EK + + L+G L+F + +VL + +
Sbjct: 61 RLTEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAE 120
Query: 125 AKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTP 184
AK+G I+ DV + GP P S + LG+ T + KG + + + + K +
Sbjct: 121 AKAGTIAPNDVHVYPGPTGMDP-SQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGN 179
Query: 185 EQARILKLLKKKMAKF 200
+A +LK L K F
Sbjct: 180 SEAVLLKKLGVKPFSF 195
>gi|358054298|dbj|GAA99224.1| hypothetical protein E5Q_05917 [Mixia osmundae IAM 14324]
Length = 494
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 16/167 (9%)
Query: 34 VEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYAL-GKSQE-DEIEKNIH 90
VE Y IFV V+N+ ++++ +R + + GKN ++ A+ G E ++E+ +
Sbjct: 19 VETYPAIFVVEVENVGSNQMHQIRQALRGKAVVLMGKNTMIRRAMRGMITEFPQLERFLP 78
Query: 91 VVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIE 150
V KG G +FT +V + A++G + DV ++ G P +E
Sbjct: 79 YV----KGNVGFVFTKSDLKEVRDIIVANKVAAPARAGAYAPLDVSIQAG-----PTGME 129
Query: 151 PQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
P + LG+ T + +G + + V G + +A +L +L
Sbjct: 130 PGKTSFFQALGIPTKIARGAIEIVSVVKVVTAGTRVGASEATLLNML 176
>gi|160552281|gb|ABX44846.1| putative 60S ribosomal protein RPLP0 [Flustra foliacea]
Length = 286
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +L +++++ +F+ +V N+ + +++ +R + D+ GKN +M A+
Sbjct: 10 KSNYFLKLTALLDEFSKVFIVNVDNVGSKQMQAIRAGLRGDATLLLGKNTMMRKAIRGHM 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
+ +EK ++V+ K G +FT++ D+ E D + + +
Sbjct: 70 DSNPSLEKLLNVI----KQNVGFVFTDK---------DLTEIRDKIVANKVPASA---RA 113
Query: 140 GPLPEFPHSIEPQLRQLG-----------LQTNLNKGVVTLFKDHTVCKKGDVLTPEQAR 188
G L ++ Q+ LG + T +++G + + D + K G+ + +A
Sbjct: 114 GALAPVSCTVPAQITVLGPEKTSFFQALQIPTKISRGNIEILADVELIKAGEKVGASEAT 173
Query: 189 ILKLL 193
+L +L
Sbjct: 174 LLNML 178
>gi|356571591|ref|XP_003553960.1| PREDICTED: uncharacterized protein LOC100806636 [Glycine max]
Length = 270
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQ 155
+KG+ L+ +N K + +F Y+ D + T+ L++ E S PQL+Q
Sbjct: 1 MKGRIQLVLSNPEKTPLHTFFCNYDLSDMP----VGTKTF-LRQKVTLELTGSTSPQLKQ 55
Query: 156 --LGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARIL 190
GL + ++KG+ ++ K+H + G+V+ + A ++
Sbjct: 56 RSTGLNSGIDKGIPSMQKNHDISCDGEVMHTDAANVI 92
>gi|332717325|gb|AEE99002.1| acidic ribosomal protein P0 [Euplotes octocarinatus]
Length = 333
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 26/180 (14%)
Query: 35 EKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEK----- 87
+KY N+ ++ + R + + +S GKN ++ AL K +E
Sbjct: 23 DKYKRALFVQCDNISARQIHNCRKELRINNSLMLMGKNALIKAALQKRLTKPVEGEPDFE 82
Query: 88 ----------NIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVEL 137
++ LKG G++FTN D+ + + E AK G + DV +
Sbjct: 83 ERSKTWTPLDHMEPFIKLLKGNLGIIFTNHDLTDIKDIVERHAREAPAKVGANAQCDVWI 142
Query: 138 KEGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ GP ++P+ + L + T + K + + D + +GD + +A +L+ L
Sbjct: 143 RAGPT-----GLDPKQTLFFQNLQIPTKIAKTQIEITSDKQIIFEGDKIGSNEAALLQKL 197
>gi|149605890|ref|XP_001515492.1| PREDICTED: 60S acidic ribosomal protein P0-like, partial
[Ornithorhynchus anatinus]
Length = 264
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 24/193 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y F+ N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK ++ ++G G +FT D+ E D + +
Sbjct: 70 ENNPALEKLLN----HIRGNVGFVFTKE---------DLTEVRDMLLANKVPAAARAGAI 116
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 117 APCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLN 176
Query: 192 LLKKKMAKFKVLL 204
+L F +++
Sbjct: 177 MLNISPFSFGLII 189
>gi|52630935|gb|AAU84931.1| putative acidic p0 ribosomal protein [Toxoptera citricida]
Length = 314
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 88/195 (45%), Gaps = 18/195 (9%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV ++++ F+ N+ + +++ +R + ++ GKN +M A+ K
Sbjct: 10 KANYFVKLVNLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAI-KGH 68
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELK 138
D +++ + ++G G +FT + D++ D + A+ G I+ V +
Sbjct: 69 IDR-NQSLEKIMPHIRGNVGFVFT---RSDLVEIRDKLLENKVRAPARPGAIAPCPVVI- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P + P+ + L + T ++KG + + D + K+GD + +A +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLN 179
Query: 195 KKMAKFKVLLYLWYN 209
+ + + + Y+
Sbjct: 180 ISPFSYGLAVQMVYD 194
>gi|187117172|ref|NP_001119687.1| ribosomal protein LP0 [Acyrthosiphon pisum]
gi|89473746|gb|ABD72685.1| putative acidic p0 ribosomal protein [Acyrthosiphon pisum]
gi|239799195|dbj|BAH70530.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799197|dbj|BAH70531.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799199|dbj|BAH70532.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799201|dbj|BAH70533.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799203|dbj|BAH70534.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799205|dbj|BAH70535.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799207|dbj|BAH70536.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799211|dbj|BAH70538.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799213|dbj|BAH70539.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799215|dbj|BAH70540.1| ACYPI000079 [Acyrthosiphon pisum]
gi|239799217|dbj|BAH70541.1| ACYPI000079 [Acyrthosiphon pisum]
Length = 314
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 88/195 (45%), Gaps = 18/195 (9%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQ 81
K N +LV ++++ F+ N+ + +++ +R + ++ GKN +M A+ K
Sbjct: 10 KANYFVKLVNLLDEFPKCFIVGADNVGSKQMQQIRISLRGNAVVLMGKNTMMRKAI-KGH 68
Query: 82 EDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDF---AKSGFISTEDVELK 138
D +++ + ++G G +FT + D++ D + A+ G I+ V +
Sbjct: 69 IDR-NQSLEKIMPHIRGNVGFVFT---RSDLVEIRDKLLENKVRAPARPGAIAPCPVVI- 123
Query: 139 EGPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLK 194
P + P+ + L + T ++KG + + D + K+GD + +A +L +L
Sbjct: 124 ----PAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKEGDKVGASEATLLNMLN 179
Query: 195 KKMAKFKVLLYLWYN 209
+ + + + Y+
Sbjct: 180 ISPFNYGLAVQMVYD 194
>gi|343427805|emb|CBQ71331.1| probable RPP0-acidic ribosomal protein L10.e [Sporisorium reilianum
SRZ2]
Length = 312
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
++L + +EKY +IF+ ++ N+ + ++ +R + GKN + AL D
Sbjct: 14 EKLTELLEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRLLVGD--N 71
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + LKG G +FT+ DV A++G + D+ +K G
Sbjct: 72 PDYERLMPHLKGNIGFVFTSGDLKDVRDLILSNRVAAPARAGAYAPADIFVKAG-----N 126
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V G+ + +A +L +L + +
Sbjct: 127 TGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNISPFTYGM 186
Query: 203 LLYLWYNKKEGTFENLLD 220
+ Y++ + ++LD
Sbjct: 187 TVVQIYDQGQCFESSVLD 204
>gi|71023945|ref|XP_762202.1| hypothetical protein UM06055.1 [Ustilago maydis 521]
gi|46101706|gb|EAK86939.1| hypothetical protein UM06055.1 [Ustilago maydis 521]
Length = 313
Score = 37.0 bits (84), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 28 DELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIE 86
++L + +EKY +IF+ ++ N+ + ++ +R + GKN + AL D
Sbjct: 14 EKLTELLEKYPSIFIVNIDNVSSQQMHQIRQSLRGKGVVLMGKNTMARRALRMLIGD--N 71
Query: 87 KNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFP 146
+ + LKG G +FT+ DV A++G + D+ +K G
Sbjct: 72 PDYERLLPHLKGNIGFVFTSGDLKDVRDVILSNRVAAPARAGAYAPADIFVKAG-----N 126
Query: 147 HSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKV 202
+EP + LG+ T + +G + + D V G+ + +A +L +L + +
Sbjct: 127 TGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNRVGTSEATLLNMLNISPFTYGM 186
Query: 203 LLYLWYNKKEGTFENLLD 220
+ Y++ + ++LD
Sbjct: 187 TVVQIYDRGQCFESSVLD 204
>gi|374636064|ref|ZP_09707648.1| ribosomal protein L10 [Methanotorris formicicus Mc-S-70]
gi|373560322|gb|EHP86589.1| ribosomal protein L10 [Methanotorris formicicus Mc-S-70]
Length = 340
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 126 KSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPE 185
K G I+ D+++++G P +L+ +G+ + KG + + +D V K G+V++ +
Sbjct: 119 KGGAIAPCDIKVQKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKAGEVVSHK 178
Query: 186 QARILKLLKKKMAKFKVLLYLWY 208
A +L L K K + L Y
Sbjct: 179 LATVLSALGIKPIKVGLNLLAAY 201
>gi|323447498|gb|EGB03416.1| hypothetical protein AURANDRAFT_39351 [Aureococcus anophagefferens]
Length = 323
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
ERKQ +++ ++ Y+ IF+ S N+ + + + +R + ++ GKN +M +
Sbjct: 6 ERKQEYFEKMEGLLDMYSKIFIVSCDNVGSKQFQQIRIALRGEAVVLMGKNTMMRKVVTA 65
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
++ + G G +FTN V + A+ G I+ DV +
Sbjct: 66 YLVKNPGHPYEMLLPKIMGNIGFVFTNGDLGKVRELIEDNRVPAPARVGAIAPIDVIVPP 125
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
GP P + L + T + KG + + + K GD + +A +L+
Sbjct: 126 GPTDCDPGQTN-FFQTLQIATKIVKGRIEITSPVNLLKAGDKVGNSEAVLLQ 176
>gi|20139848|sp|Q9U3U0.1|RLA0_CERCA RecName: Full=60S acidic ribosomal protein P0; Short=CcP0
gi|6598977|emb|CAB63647.1| P0 protein [Ceratitis capitata]
Length = 317
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 29 ELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQEDEIEK 87
++V+ ++Y F+ N+ + +++++R + GKN +M A+ +E
Sbjct: 16 KVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMRKAI----RGHLEN 71
Query: 88 NIHV--VSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEF 145
N + + +KG G +FT +V + A++G I+ V + P
Sbjct: 72 NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLPVII-----PAQ 126
Query: 146 PHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLL 193
+ P+ + L + T ++KG + + D + K GD + +A +L +L
Sbjct: 127 NTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNML 178
>gi|340519991|gb|EGR50228.1| 60S acidic ribosomal protein P0 [Trichoderma reesei QM6a]
Length = 369
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 16/205 (7%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K D+L ++ Y +IF+ + N+ + ++ ++R+ + GKN ++ AL
Sbjct: 8 KAGYFDKLKGLLQDYKSIFIVEIDNVSSQQMHEIRHSLRGKGVVLMGKNTMVRRALRTFL 67
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
D E E+ + V KG G +FTN ++ A++G ++ DV +
Sbjct: 68 VDTPEYERILPFV----KGNVGFVFTNGDLKEIRDQLLANRVAAPARAGAVAPVDVWVPA 123
Query: 140 GPLPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKK 195
G +EP + LG+ T + +G + + D + G+ + P +A +L LL
Sbjct: 124 G-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLIDAGNKVGPSEASLLNLLNI 178
Query: 196 KMAKFKVLLYLWYNKKEGTFENLLD 220
+ + + Y++ + ++LD
Sbjct: 179 SPFTYGMGIAQVYDQGQTFPPSILD 203
>gi|45384494|ref|NP_990318.1| 60S acidic ribosomal protein P0 [Gallus gallus]
gi|1350778|sp|P47826.1|RLA0_CHICK RecName: Full=60S acidic ribosomal protein P0; AltName: Full=60S
ribosomal protein L10E
gi|453474|gb|AAC38020.1| acidic ribosomal phosphoprotein [Gallus gallus]
Length = 316
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 80/193 (41%), Gaps = 24/193 (12%)
Query: 23 KQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKD-SRFFFGKNKVMAYALGKSQ 81
K N ++++ ++ Y FV N+ + +++ +R + + GKN +M A+
Sbjct: 10 KSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHL 69
Query: 82 ED--EIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E+ +EK + ++G G +FT D+ E D + +
Sbjct: 70 ENNPALEK----LLPHIRGNVGFVFTKE---------DLTEIRDMLLANKVPAAARAGAI 116
Query: 140 GP----LPEFPHSIEPQ----LRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILK 191
P +P + P+ + LG+ T +++G + + D + K GD + +A +L
Sbjct: 117 APCDVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLN 176
Query: 192 LLKKKMAKFKVLL 204
+L F +++
Sbjct: 177 MLNISPFSFGLVI 189
>gi|407929155|gb|EKG21991.1| Ribosomal protein L10/acidic P0 [Macrophomina phaseolina MS6]
Length = 315
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 81/184 (44%), Gaps = 24/184 (13%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
+ K D+L +E+Y +IF+ V N+ + ++ ++R + ++ GKN ++ AL
Sbjct: 6 QNKAAYFDKLKGLLEEYKSIFIVGVDNVSSQQMHEIRQALRSEAVVLMGKNTMVRRALRG 65
Query: 80 --SQEDEIEKNI-HVVSSALKGQCGLLFTNRS----KDDVL---MWFDVYEDEDFAKSGF 129
++ E E+ + HV KG G +FTN +D +L + F
Sbjct: 66 FVAENPEYERLLPHV-----KGNVGFIFTNGDLKTIRDKILSNRVAAPARAGAVAPADVF 120
Query: 130 ISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARI 189
+ + ++ G F + LG+ T + +G + + D + + G+ + +A +
Sbjct: 121 VPAGNTGMEPGKTSFF--------QALGVPTKIARGTIEITSDLKLVEAGNKVGASEATL 172
Query: 190 LKLL 193
L +L
Sbjct: 173 LNML 176
>gi|219884161|gb|ACL52455.1| unknown [Zea mays]
Length = 319
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +++Y + + N+ + +L+D+R + DS GKN ++ +
Sbjct: 9 EKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKG+ V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKL 181
>gi|226509268|ref|NP_001141489.1| uncharacterized protein LOC100273601 [Zea mays]
gi|194704778|gb|ACF86473.1| unknown [Zea mays]
gi|413921355|gb|AFW61287.1| hypothetical protein ZEAMMB73_391125 [Zea mays]
Length = 319
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 3/174 (1%)
Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGK 79
E+K +L +++Y + + N+ + +L+D+R + DS GKN ++ +
Sbjct: 9 EKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNTLIRRCIKV 68
Query: 80 SQEDEIEKNIHVVSSALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKE 139
E + L G GL+FT +V Y+ A+ G ++ DV +
Sbjct: 69 YAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPP 128
Query: 140 GPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGD-VLTPEQARILKL 192
G P S + L + T +NKG V + + KKG+ V + E A + KL
Sbjct: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKL 181
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,724,336,543
Number of Sequences: 23463169
Number of extensions: 154859677
Number of successful extensions: 341781
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 579
Number of HSP's that attempted gapping in prelim test: 340530
Number of HSP's gapped (non-prelim): 1154
length of query: 243
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 105
effective length of database: 9,121,278,045
effective search space: 957734194725
effective search space used: 957734194725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 75 (33.5 bits)