Query psy15723
Match_columns 243
No_of_seqs 191 out of 1222
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 19:48:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15723.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15723hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jsy_A Acidic ribosomal protei 100.0 2E-65 6.7E-70 444.0 19.4 206 20-227 2-211 (213)
2 3j21_k Acidic ribosomal protei 100.0 2E-62 6.9E-67 450.8 10.6 207 18-226 3-214 (339)
3 3iz5_s 60S acidic ribosomal pr 100.0 2E-60 6.9E-65 434.0 12.2 206 17-225 5-214 (319)
4 3u5i_q A0, L10E, 60S acidic ri 100.0 5.2E-59 1.8E-63 423.5 13.8 203 19-226 4-210 (312)
5 1vq8_G Acidic ribosomal protei 100.0 7E-59 2.4E-63 427.6 3.6 205 15-226 8-216 (348)
6 2zkr_g 60S acidic ribosomal pr 100.0 2.9E-59 9.9E-64 426.0 0.0 205 17-226 4-212 (317)
7 3a1y_G Acidic ribosomal protei 100.0 7E-57 2.4E-61 405.4 4.7 207 17-225 2-213 (284)
8 2j01_J 50S ribosomal protein L 99.9 3.3E-23 1.1E-27 173.7 10.4 109 19-143 2-113 (173)
9 1zav_A 50S ribosomal protein L 99.9 3.7E-23 1.3E-27 174.4 7.2 110 19-142 4-119 (180)
10 3sgf_H 50S ribosomal protein L 99.8 9.8E-23 3.4E-27 169.7 -2.0 97 19-122 4-102 (165)
11 3a1y_G Acidic ribosomal protei 75.8 0.39 1.3E-05 42.4 -1.0 64 146-209 96-159 (284)
12 1d7q_A Translation initiation 60.6 1 3.5E-05 36.0 -1.4 46 157-203 59-115 (143)
13 2dgy_A MGC11102 protein; EIF-1 30.7 14 0.00047 28.1 0.6 44 156-200 42-97 (111)
14 1gp6_A Leucoanthocyanidin diox 23.4 1.4E+02 0.0047 26.5 6.0 50 9-59 49-98 (356)
No 1
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2e-65 Score=443.97 Aligned_cols=206 Identities=17% Similarity=0.286 Sum_probs=198.3
Q ss_pred hHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-CceEEEEehHHHHHHhhccchhhhhhchhhhhhhccC
Q psy15723 20 LERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALKG 98 (243)
Q Consensus 20 ~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~L~G 98 (243)
++||.++|++|++++++|+++||++|+||+++|+++||+.|| +++|+|||||||++||+++.++|++|++++|.++|+|
T Consensus 2 ~e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~~~~~~v~KNtL~r~Al~~~~~~e~~~~~~~L~~~l~G 81 (213)
T 3jsy_A 2 APWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVER 81 (213)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTTTEEEEECCHHHHHHHHHHHHHHTTCGGGGGGGGGCCS
T ss_pred chHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhCCCEEEEEeHHHHHHHHhhchhhhcccchhHHHHhCcC
Confidence 489999999999999999999999999999999999999999 4899999999999999999888999999999999999
Q ss_pred ceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCeeEeec
Q psy15723 99 QCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKK 178 (243)
Q Consensus 99 ~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~v~k~ 178 (243)
++||+||++||.+++++|.+|++++|||+|++||+||+||+|||+++||+|+|+||+|||||+|++|+|+|.+|++||++
T Consensus 82 ~~~l~Ft~~dp~~v~k~l~~~~~~~~Ar~GaiAp~dV~ip~G~t~~~p~~~~~~~q~lgiptki~~G~I~i~~d~~v~k~ 161 (213)
T 3jsy_A 82 GAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKK 161 (213)
T ss_dssp SEEEEEESSCHHHHHHHHHHSCEEECCCTTCBCSSCEEECSEEEEECSSTHHHHHHHTTCCEEEETTEEEECSCEEEECT
T ss_pred CeEEEEeCCCHHHHHHHHHHcCCcccccCCCcCCceEEECCCCCCCCCCccHHHHHHcCCceEeecCeEEEccceEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCccc
Q psy15723 179 GDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTPMD 227 (243)
Q Consensus 179 Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~~~ 227 (243)
||+||++||+||++|||+|++|+|.|.++||+ |.+|. |+++++++.+
T Consensus 162 G~~v~~~~A~lL~~l~i~p~~~~l~l~~~~~~--g~i~~~~~L~i~~e~~~~ 211 (213)
T 3jsy_A 162 GEVVSPKLAAVLDRLGIKPIKVGLNILAVYED--GIIYTPDVLKVDEEKLLA 211 (213)
T ss_dssp TSBCCHHHHHHHHHTTCCCEEESCEEEEEEET--TEEECHHHHHHHCSCTTS
T ss_pred CCCcCHHHHHHHHHcCCCcEEEEEEEEEEEeC--CceeCHHHcccCHHHHhh
Confidence 99999999999999999999999999999995 78995 6677766544
No 2
>3j21_k Acidic ribosomal protein P0 homolog; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=2e-62 Score=450.78 Aligned_cols=207 Identities=23% Similarity=0.322 Sum_probs=196.4
Q ss_pred CchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC--CceEEEEehHHHHHHhhccchhhhhhchhhhhhh
Q psy15723 18 KGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95 (243)
Q Consensus 18 k~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr--~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~ 95 (243)
+.++||.++|++|++++++|+++||++|+||+++|+++||+.|| |++|+|||||||++||+++.++|++|++++|.++
T Consensus 3 ~~~e~K~~~v~el~e~l~~~~~v~v~~~~gl~v~ql~~lR~~lr~~g~~~~v~KNtL~r~Al~~~~~~e~~~~l~~L~~~ 82 (339)
T 3j21_k 3 HVAEWKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELEKLINY 82 (339)
T ss_dssp ---CCTTTHHHHHHHHHHHSSEEEEEECTTCCTTHHHHHHHHHHHTTEEEECCHHHHSCHHHHHHHSSCCCSSSSSSSCC
T ss_pred ccHHHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhcCCeEEEEEhHHHHHHHHhcChhhhccccHHHHHHH
Confidence 46789999999999999999999999999999999999999999 4899999999999999999888899999999999
Q ss_pred ccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCeeE
Q psy15723 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175 (243)
Q Consensus 96 L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~v 175 (243)
|+||+||+||++||.+++++|.+|++++|||+|.+||+||+||+|||+++||+|+|+||+|||||+|++|+|+|.+|++|
T Consensus 83 L~G~~~l~Ft~~dp~~v~k~l~~~~~~~~Ar~GaiAp~dV~Ip~G~t~~~p~~~~~~fq~lgiptki~~G~I~i~~d~~v 162 (339)
T 3j21_k 83 IEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVV 162 (339)
T ss_dssp CCTTEEEEEESSCHHHHHHHHHHSCCCCCCCTTCBCSSCEEECCEECSCCSSHHHHHHHHHTCCEEEETTEEEECSCEEE
T ss_pred hcCCeEEEEECCCHHHHHHHHHHcCCcccccCCCcCCceEEecCCCCCCCCCccHHHHHHcCCCeEeccCeEEEccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCcc
Q psy15723 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTPM 226 (243)
Q Consensus 176 ~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~~ 226 (243)
|++|++||++||+||++|||+|++|+|.|.++||+ |.+|. |+++++++.
T Consensus 163 ~k~G~~v~~~~A~lL~~l~i~p~~~~l~l~~~~~~--g~i~~~~~L~i~~e~~~ 214 (339)
T 3j21_k 163 LKAGEEITPELANILNALGIQPLEVGLDLLAVYED--GIIYTPDVLAIDESEYI 214 (339)
T ss_dssp ECTTSBCCHHHHHHHHHHTCCCSCCSCEEEEEEET--TEEECHHHHCCCHHHHH
T ss_pred EecCCCcCHHHHHHHHHcCCCcEEeeeeEEEEEeC--CcEecHHhCCCCHHHHH
Confidence 99999999999999999999999999999999994 78995 666665543
No 3
>3iz5_s 60S acidic ribosomal protein P0 (L10P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_s
Probab=100.00 E-value=2e-60 Score=433.97 Aligned_cols=206 Identities=21% Similarity=0.342 Sum_probs=195.2
Q ss_pred cCchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-CceEEEEehHHHHHHhhccchhhhhhchhhhhhh
Q psy15723 17 KKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95 (243)
Q Consensus 17 Kk~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~ 95 (243)
+..++||.++|++|++++++|+++||++|+||+++|+++||+.|| +++|+|||||||++||+++.++++++++++|.++
T Consensus 5 ~~~~e~K~~~v~el~e~l~~y~~v~vv~~~gl~v~ql~~LR~~lR~~~~~~V~KNTL~r~Al~~~~e~~~~~~le~L~~~ 84 (319)
T 3iz5_s 5 RTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIRRCIKVHADNTGNKEFLELMPL 84 (319)
T ss_dssp SSSCCCSSHHHHHHHHHHHHCSEEEEEECTTSCHHHHHHHHHHHHHHSCEECCSTTTCCHHHHHHHSSSCCSSSSSSSCC
T ss_pred cchHHHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhCCcEEEEEhHHHHHHHHhhchhhhccccHHHHHHH
Confidence 345789999999999999999999999999999999999999999 6999999999999999999888888999999999
Q ss_pred ccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCeeE
Q psy15723 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175 (243)
Q Consensus 96 L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~v 175 (243)
|+||+||+||++||.+++++|.+|++++|||+|.+||+||+||+|||++.|++ .++||+|||||+|++|+|+|.+|++|
T Consensus 85 L~G~~gl~FT~~dp~~v~k~l~~~k~~~pAr~GaiAp~dV~VpaG~tg~~P~~-~s~fq~LgiptkI~kG~I~I~~d~~v 163 (319)
T 3iz5_s 85 LVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVEL 163 (319)
T ss_dssp CCTTEEEEEESSCHHHHHHHHHHSCEEECCCTTCBCSSCEEECCEECCCCSSC-THHHHHHTCCEEEETTEEEECSCEEE
T ss_pred hcCCeEEEEECCChHHHHHHHHHccccccccCCCcCCceEEECCCCCCCCCcc-hHHHHHcCCceEEecCeEEEcCceEE
Confidence 99999999999999999999999999999999999999999999999987765 69999999999999999999999999
Q ss_pred eecCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCc
Q psy15723 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTP 225 (243)
Q Consensus 176 ~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~ 225 (243)
|++||+||++||+||++|||+|++|+|.|.++||+ |.+|. |+++++++
T Consensus 164 ~k~G~~v~~~~A~lL~~l~i~p~~f~l~l~~~~d~--g~i~~~~vL~i~~e~~ 214 (319)
T 3iz5_s 164 IKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDS--GSVFSPEVLDLTEDDL 214 (319)
T ss_dssp ECTTSBCCHHHHHHHHHHTCCCEEESCEEEEEEET--TEEECHHHHSCCCHHH
T ss_pred EecCCCcCHHHHHHHHHhCCCceEEEeeeeEEEeC--CceeCHHHcCCCHHHH
Confidence 99999999999999999999999999999999995 78995 66666554
No 4
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=100.00 E-value=5.2e-59 Score=423.55 Aligned_cols=203 Identities=20% Similarity=0.318 Sum_probs=116.4
Q ss_pred chHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-CceEEEEehHHHHHHhhccchhhhhhchhhhhhhcc
Q psy15723 19 GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSALK 97 (243)
Q Consensus 19 ~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~L~ 97 (243)
++++|.++|++|++++++|+++||++|+||+++|+++||+.|| .++++|+|||||++||+++.++ .+++++|.++|+
T Consensus 4 ~re~K~~~v~el~e~l~~~~~v~vv~~~gl~v~ql~~LR~~lR~~~~~~V~KNTL~r~Al~~~~~~--~~~le~L~~~L~ 81 (312)
T 3u5i_q 4 IREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSD--LPDFEKLLPFVK 81 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHSSSCEEEECCHHHHHHHHHTTSSS--SCGGGGTGGGCC
T ss_pred cHHHHHHHHHHHHHHHHhCCEEEEEecCCCCHHHHHHHHHHHhcCceEEEeehHHHHHHHhhCccc--ccChHHHHHhcc
Confidence 5799999999999999999999999999999999999999999 4899999999999999997643 468999999999
Q ss_pred CceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCeeEee
Q psy15723 98 GQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCK 177 (243)
Q Consensus 98 G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~v~k 177 (243)
||+||+||++||.+++++|.+|++++|||+|++||+||+||+|||++.|+ +.++||+|||||+|++|+|+|.+|++||+
T Consensus 82 G~~gl~Ft~~dp~~v~k~l~~~k~~~pAr~GaiAp~dV~Ip~G~tg~~P~-~~s~fq~Lgiptki~kG~I~I~~d~~v~k 160 (312)
T 3u5i_q 82 GNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGMEPG-KTSFFQALGVPTKIARGTIEIVSDVKVVD 160 (312)
T ss_dssp SSEEEEEESSCHHHHHHHHHTSSCCC------------------------------------------------------
T ss_pred CCEEEEEECCCHHHHHHHHHhccCcccccCCCcCCceEEECCCCCCCCCc-chHHHHHcCCCeEeeCCEEEEccceEEEe
Confidence 99999999999999999999999999999999999999999999997776 58999999999999999999999999999
Q ss_pred cCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCcc
Q psy15723 178 KGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTPM 226 (243)
Q Consensus 178 ~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~~ 226 (243)
+||+||++||+||++|||+|++|+|.|.++||+ |.+|. |+++++++.
T Consensus 161 ~G~~v~~~~A~lL~~l~i~p~~~~l~l~~~~d~--g~i~~~~~L~i~~e~~~ 210 (312)
T 3u5i_q 161 AGNKVGQSEASLLNLLNISPFTFGLTVVQVYDN--GQVFPXXXXXXXXXXXX 210 (312)
T ss_dssp -----------------------CCEEEEEEES--SCCCCSTTTSCCSSTTT
T ss_pred CCCCcCHHHHHHHHHcCcCcEEEEEEEEEEecC--Cceeccccccccccccc
Confidence 999999999999999999999999999999995 67885 556665543
No 5
>1vq8_G Acidic ribosomal protein P0 homolog; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: j.84.1.1 PDB: 1k73_I* 1k8a_I* 1k9m_I* 1kc8_I* 1kd1_I* 1kqs_G* 1m1k_I* 1m90_I* 1n8r_I* 1nji_I* 1q7y_I* 1q81_I* 1q82_I* 1q86_I* 1qvf_G 1qvg_G 1s72_G* 1vq4_G* 1vq5_G* 1vq6_G* ...
Probab=100.00 E-value=7e-59 Score=427.56 Aligned_cols=205 Identities=19% Similarity=0.287 Sum_probs=28.6
Q ss_pred cccCchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-CceEEEEehHHHHHHhhccchhhhhhchhhhh
Q psy15723 15 TVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVS 93 (243)
Q Consensus 15 ~~Kk~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~ 93 (243)
+.++.++||.++|++|++++++|+++||++|+||+++|+++||+.|| .++|+|+|||||++||++++. +++.|.
T Consensus 8 ~~k~~~e~K~~~V~eL~e~l~~~~~v~vvdy~GLtv~ql~~LR~~lR~~~~~~V~KNTL~r~Al~~~~~-----~le~L~ 82 (348)
T 1vq8_G 8 KTETIPEWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERALDDVDD-----GLEDLN 82 (348)
T ss_dssp ----CCHHHHHHHHHHHHHHHC---------------------------------CHHHHHHHHTC--------------
T ss_pred cccccHHHHHHHHHHHHHHHHhCCEEEEEECCCCCHHHHHHHHHHHHhcceEEEeHHHHHHHHHHhCCc-----chHHHH
Confidence 34678999999999999999999999999999999999999999999 589999999999999999842 589999
Q ss_pred hhccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCe
Q psy15723 94 SALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDH 173 (243)
Q Consensus 94 ~~L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~ 173 (243)
++|+|++||+||++||.+++++|.+|++++|||+|.+||++|+||+|||++.||+|+|+||+|||||+|++|+|+|.+|+
T Consensus 83 ~~LkG~tal~Ft~~Dp~~vaK~l~~f~~~~pAr~GaiAp~dV~IpaG~t~~~P~~~~~~fq~LgIPTkI~kG~I~I~~d~ 162 (348)
T 1vq8_G 83 GYITGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGPFVGELQSVGADARIQEGSIQVLSDS 162 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhccCCEEEEEeCCCHHHHHHHHHHhcccchhhcCCcCCceEEeCCCCCCCCCCchHHHHHHcCCCEEeccCceEecCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCcc
Q psy15723 174 TVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTPM 226 (243)
Q Consensus 174 ~v~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~~ 226 (243)
+||++|++||++||+||++|||+|++|+|.|+++||+ |.+|. |+++++++.
T Consensus 163 ~v~k~G~~v~~~~A~LL~~LgI~p~~f~l~l~~~~d~--g~~~~~~vL~i~~e~~~ 216 (348)
T 1vq8_G 163 TVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVFAD--GVLFEPEELELDIDEYR 216 (348)
T ss_dssp --------------------------------------------------------
T ss_pred EEeeCCCCcCHHHHHHHHHcCCCceeeeeeeEEEEeC--CcccCHHHccCCHHHHH
Confidence 9999999999999999999999999999999999985 67776 555555443
No 6
>2zkr_g 60S acidic ribosomal protein P0; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=2.9e-59 Score=426.01 Aligned_cols=205 Identities=19% Similarity=0.329 Sum_probs=0.0
Q ss_pred cCchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-CceEEEEehHHHHHHhhccchhhhhhchhhhhhh
Q psy15723 17 KKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95 (243)
Q Consensus 17 Kk~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~ 95 (243)
...++||.++|++|++++++|+++||++|+||+++|+++||+.|| .++|+|+|||||++||+++.+ +.+++++|.++
T Consensus 4 ~~~~e~K~~~V~eL~e~l~~~~~v~vvd~~gl~v~ql~~LR~~lR~~~~~~V~KNTL~r~Al~~~~~--~~~~~e~L~~~ 81 (317)
T 2zkr_g 4 EDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLE--NNPALEKLLPH 81 (317)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchHHHHHHHHHHHHHHHHhCCEEEEEECCCCCHHHHHHHHHHHhcCcEEEEEeHHHHHHHHhhCcc--cccchhhhhhc
Confidence 346789999999999999999999999999999999999999999 689999999999999999864 46789999999
Q ss_pred ccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCeeE
Q psy15723 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHTV 175 (243)
Q Consensus 96 L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~v 175 (243)
|+|++||+||++||.+++++|.+|++++|||+|.+||+||+||+|||++.| +++++||+|||||+|++|+|+|.+|++|
T Consensus 82 L~G~~al~Ft~~Dp~~vaK~l~~f~~~~pAr~GaiAp~dV~Ip~G~t~~~p-~~~~~fq~LgipTkI~kG~I~i~~d~~v 160 (317)
T 2zkr_g 82 IRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGP-EKTSFFQALGITTKISRGTIEILSDVQL 160 (317)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCEEEEEECCCHHHHHHHHHHhCccchhccCCcCCceEEeCCCCCCCCC-cchHHHHHcCCCeEeeCCeEEEecceEE
Confidence 999999999999999999999999999999999999999999999998655 5699999999999999999999999999
Q ss_pred eecCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEE---ccCCcCCcc
Q psy15723 176 CKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFEN---LLDREKTPM 226 (243)
Q Consensus 176 ~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~---~~~~~~~~~ 226 (243)
|++||+||++||+||++|||+|++|+|.|+++||+ |.+|. |+++++++.
T Consensus 161 ~k~G~~v~~~~A~lL~~l~i~p~~~~l~l~~~~d~--g~~~~~~~L~i~~e~~~ 212 (317)
T 2zkr_g 161 IKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDN--GSIYNPEVLDITEETLH 212 (317)
T ss_dssp ------------------------------------------------------
T ss_pred ecCCCCcCHHHHHHHHHcCCCceeeeeeeeEEEec--CcccchHhccCCHHHHH
Confidence 99999999999999999999999999999999985 67775 566665554
No 7
>3a1y_G Acidic ribosomal protein P0; stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=100.00 E-value=7e-57 Score=405.37 Aligned_cols=207 Identities=25% Similarity=0.334 Sum_probs=124.3
Q ss_pred cCchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC--CceEEEEehHHHHHHhhccchhhhhhchhhhhh
Q psy15723 17 KKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSS 94 (243)
Q Consensus 17 Kk~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr--~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~ 94 (243)
++.++||.++|++|++++++|++++|++|+||+++|+++||+.|| |++|+|+|||||++||+++.++++++++++|.+
T Consensus 2 ~~~~e~K~~~v~el~~~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~~g~~~~v~KNtL~~~Al~~~~~~~~~~~~~~L~~ 81 (284)
T 3a1y_G 2 AHVAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVE 81 (284)
T ss_dssp CSSCCCTTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHHTTEEEEECSSSSCCHHHHHHHTTCSCSSTTSSSC
T ss_pred CCcHHHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHhcCcEEEEeHHHHHHHHHhhCccccccccHHHHhh
Confidence 567899999999999999999999999999999999999999999 499999999999999999988888899999999
Q ss_pred hccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCCCCCCCChhHhhhcCceeeecCceEEEccCee
Q psy15723 95 ALKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLPEFPHSIEPQLRQLGLQTNLNKGVVTLFKDHT 174 (243)
Q Consensus 95 ~L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~~~p~~~~~~~~kLgiptki~kG~I~i~~d~~ 174 (243)
+|+|++|++||++||.+++++|.+|+.++|||+|.+|+++|+||+|+++..||+|+|+||+|||||+|++|+|+|.+|++
T Consensus 82 ~l~G~~al~Ft~~dp~~vak~l~~f~~~~~ar~Gaia~~dv~ip~g~~~~~p~~~~~~l~~LgIptki~~g~I~i~~d~~ 161 (284)
T 3a1y_G 82 YIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTT 161 (284)
T ss_dssp CCCTTEEEEEESSCHHHHHHHHHHCCCC----------------------------------------------------
T ss_pred hcCCCEEEEEECCCHHHHHHHHHHhcchhhhhcCCccceeEEecCCCCCCCCcchHHHHHHCCCCeEEecCeeEeecceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCcccCHHHHHHHHHcCcCceeeEEEEEEEEeCCCceEEEc---cCCcCCc
Q psy15723 175 VCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYNKKEGTFENL---LDREKTP 225 (243)
Q Consensus 175 v~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~~~~g~~~~~---~~~~~~~ 225 (243)
||++|++|+++||+||++|||+|++|++.+.++||+ |.++.. +++++++
T Consensus 162 v~~~G~~l~~~~a~lL~~L~i~~~~~~l~i~~~~~~--~~~~~~~vl~i~~e~~ 213 (284)
T 3a1y_G 162 VLKAGEVITPELANILNALGIQPLEVGLDVLAVYED--GIVYTPDVLAIDEQEY 213 (284)
T ss_dssp ---------------------CCCCCCCEEEEEEET--TEEECHHHHSCCHHHH
T ss_pred EEecCCCcCHHHHHHHHHcCCCHHHHHHHHHHHhhc--cccCCHHHccCCHHHH
Confidence 999999999999999999999999999999999985 678864 4444443
No 8
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=99.89 E-value=3.3e-23 Score=173.70 Aligned_cols=109 Identities=18% Similarity=0.291 Sum_probs=99.1
Q ss_pred chHHHHHHHHHHHHHHhhCC-eEEEEEeCCCCcHHHHHHHHhhC--CceEEEEehHHHHHHhhccchhhhhhchhhhhhh
Q psy15723 19 GLERKQNLRDELVKAVEKYN-NIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSA 95 (243)
Q Consensus 19 ~~e~K~~~v~~l~e~l~~y~-~v~v~~~~~l~~~ql~~lR~~lr--~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~ 95 (243)
++++|.++|++|++.+++|+ .++|++|+|++++|+++||+.|| |++|+|+|||||++||+++ +++. .++
T Consensus 2 ~~~~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~~g~~~~V~KNtL~~~Al~~~-------~~~~-~~~ 73 (173)
T 2j01_J 2 PNKRNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQNGARLFVAKNTLIRLALKEL-------GLPE-LDG 73 (173)
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEehhHHHHHHHhcC-------CCCc-ccc
Confidence 47899999999999999999 99999999999999999999999 6899999999999999987 4888 999
Q ss_pred ccCceEEEEecCCHHHHHHHHhhcCcccccccCCCccceEEEcCCCCC
Q psy15723 96 LKGQCGLLFTNRSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPLP 143 (243)
Q Consensus 96 L~G~~allFTn~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t~ 143 (243)
|+||+|++|| +||.+++++|.+|.+.. ++..++|++|.++
T Consensus 74 l~G~~a~~fs-~dp~~~ak~l~~f~k~~-------~~~~l~ikgg~~e 113 (173)
T 2j01_J 74 LQGPSAVVFY-EDPVAAAKTLVQFAKSN-------PKGIPQVKSGLLQ 113 (173)
T ss_pred ccCCEEEEEe-CCHHHHHHHHHHHHHhC-------CCCCeEEEEEEEC
Confidence 9999999999 99999999998775532 3466888888774
No 9
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=99.88 E-value=3.7e-23 Score=174.40 Aligned_cols=110 Identities=18% Similarity=0.250 Sum_probs=98.1
Q ss_pred chHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC-----CceEEEEehHHHHHHhhccchhhhhhchhhhh
Q psy15723 19 GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK-----DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVS 93 (243)
Q Consensus 19 ~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr-----~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~ 93 (243)
++++|.++|++|++.+++|+.++|++|+|++++|+++||++|| |++|+|+|||||++|++++ +++.|.
T Consensus 4 ~~~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~~~~g~~~~V~KNtL~~~Al~~~-------~~~~L~ 76 (180)
T 1zav_A 4 TRQQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNA-------EYEGYE 76 (180)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHHHTTSEEEEEECHHHHHHHHHHT-------TCCSCG
T ss_pred CHHHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhcccCCeEEEEehHHHHHHHHccC-------ChhhHH
Confidence 4789999999999999999999999999999999999999998 4899999999999999987 589999
Q ss_pred hhccCceEEEEec-CCHHHHHHHHhhcCcccccccCCCccceEEEcCCCC
Q psy15723 94 SALKGQCGLLFTN-RSKDDVLMWFDVYEDEDFAKSGFISTEDVELKEGPL 142 (243)
Q Consensus 94 ~~L~G~~allFTn-~dp~~v~k~l~~~~~~~~Ak~G~iA~~dvvI~~G~t 142 (243)
++|+||+|++||+ +||.+++++|.+|.+.. . +..++|++|.+
T Consensus 77 ~~l~G~~a~~fs~~~dp~~~ak~l~~f~k~~-----~--~~~l~ikgg~~ 119 (180)
T 1zav_A 77 EFLKGPTAVLYVTEGDPVEAVKIIYNFYKDK-----K--ADLSRLKGGFL 119 (180)
T ss_dssp GGCSSSEEEEEESSSCTHHHHHHHHHHHHHT-----T--CCGGGEEEEEE
T ss_pred HhCcCCEEEEEecCCCHHHHHHHHHHHHHhC-----C--CCCeEEEEEEE
Confidence 9999999999999 99999999999775432 1 24466666655
No 10
>3sgf_H 50S ribosomal protein L10; typeii release factor binding with ribosome, ribosome-antibi complex; 3.20A {Escherichia coli} PDB: 3uos_H 3j12_J* 3j0w_J* 3j0y_J* 3j11_J* 3j0t_J* 3j14_J*
Probab=99.83 E-value=9.8e-23 Score=169.75 Aligned_cols=97 Identities=12% Similarity=0.190 Sum_probs=92.1
Q ss_pred chHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHhhC--CceEEEEehHHHHHHhhccchhhhhhchhhhhhhc
Q psy15723 19 GLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWK--DSRFFFGKNKVMAYALGKSQEDEIEKNIHVVSSAL 96 (243)
Q Consensus 19 ~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~lr--~s~~~vgKNtLmk~AL~~~~e~e~~~~l~~L~~~L 96 (243)
+|++|.++|++|++.+++|+.++++||+|++++|+++||+.|| |+.++|+|||||++|++++ +++.|.++|
T Consensus 4 ~r~~K~~~V~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~g~~~~V~KNtL~~~Al~~~-------~~~~L~~~l 76 (165)
T 3sgf_H 4 NLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGT-------PFECLKDAF 76 (165)
T ss_dssp HHHHHHHHHHHHHHHHSCSCEEECCCTTCCHHHHHHHTTTTTSSCCSSEECCCCTTTTTTTTTC-------TTTCTTCST
T ss_pred CHHHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHHHcCcEEEEECcHHHHHHHhcC-------CcchhHHhC
Confidence 5799999999999999999999999999999999999999999 5899999999999999986 599999999
Q ss_pred cCceEEEEecCCHHHHHHHHhhcCcc
Q psy15723 97 KGQCGLLFTNRSKDDVLMWFDVYEDE 122 (243)
Q Consensus 97 ~G~~allFTn~dp~~v~k~l~~~~~~ 122 (243)
+||+|++||++||.++++++.+|.+.
T Consensus 77 ~G~tai~fs~~dp~~~aK~l~~f~K~ 102 (165)
T 3sgf_H 77 VGPTLIAYSMEHPGAAARLFKEFAKA 102 (165)
T ss_dssp TCCSCCCEEEECSSCSHHHHHHHHHH
T ss_pred cCCEEEEEeCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999988653
No 11
>3a1y_G Acidic ribosomal protein P0; stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=75.79 E-value=0.39 Score=42.38 Aligned_cols=64 Identities=11% Similarity=-0.056 Sum_probs=10.1
Q ss_pred CCCChhHhhhcCceeeecCceEEEccCeeEeecCcccCHHHHHHHHHcCcCceeeEEEEEEEEe
Q psy15723 146 PHSIEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLLYLWYN 209 (243)
Q Consensus 146 p~~~~~~~~kLgiptki~kG~I~i~~d~~v~k~Ge~vs~~qA~lL~~lgikp~~~~l~l~~~~~ 209 (243)
|...-..|.+...|.-...|.|...+.++...+|+.++.+.+..|+.|||++...+..|...+|
T Consensus 96 p~~vak~l~~f~~~~~ar~Gaia~~dv~ip~g~~~~~p~~~~~~l~~LgIptki~~g~I~i~~d 159 (284)
T 3a1y_G 96 PFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKD 159 (284)
T ss_dssp HHHHHHHHHHCCCC--------------------------------------------------
T ss_pred HHHHHHHHHHhcchhhhhcCCccceeEEecCCCCCCCCcchHHHHHHCCCCeEEecCeeEeecc
Confidence 3344566999999999999999999999999999988888899999999999999999986665
No 12
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=60.59 E-value=1 Score=36.01 Aligned_cols=46 Identities=26% Similarity=0.284 Sum_probs=34.0
Q ss_pred CceeeecCceEEE-ccCeeEe-------ecCcc---cCHHHHHHHHHcCcCceeeEEE
Q psy15723 157 GLQTNLNKGVVTL-FKDHTVC-------KKGDV---LTPEQARILKLLKKKMAKFKVL 203 (243)
Q Consensus 157 giptki~kG~I~i-~~d~~v~-------k~Ge~---vs~~qA~lL~~lgikp~~~~l~ 203 (243)
-||-++.+ .||| ..|+|++ .+|+. .+++|++.|+..|.=|.+|...
T Consensus 59 ~I~GKmRk-~IwI~~GD~VlVe~~~yd~~KG~Ii~r~~~devk~L~k~g~wP~~f~~~ 115 (143)
T 1d7q_A 59 HIRGKLRK-KVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 115 (143)
T ss_dssp ECCSGGGG-SCCCCTTCEEEEECSSSSSSCCEEEEEECTTTHHHHHHHTSSCTTCCCC
T ss_pred Eeccccee-eEEecCCCEEEEeeccCCCCeEEEEEEeCHHHHHHHHHcCCCChHHhhC
Confidence 35566666 6666 3666666 45665 4899999999999999999764
No 13
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.70 E-value=14 Score=28.09 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=30.6
Q ss_pred cCceeeecCceEEE-ccCeeEeec--------Cc---ccCHHHHHHHHHcCcCceee
Q psy15723 156 LGLQTNLNKGVVTL-FKDHTVCKK--------GD---VLTPEQARILKLLKKKMAKF 200 (243)
Q Consensus 156 Lgiptki~kG~I~i-~~d~~v~k~--------Ge---~vs~~qA~lL~~lgikp~~~ 200 (243)
.-||-|+.+ .|+| ..|+|++.. |+ .++++|++-|+.-|.=|.+|
T Consensus 42 a~i~GK~Rk-~IwI~~GD~VlVe~~~yd~~~kg~Iv~r~~~~qvk~L~k~g~wP~~F 97 (111)
T 2dgy_A 42 VSMPSKYRK-NIWIKRGDFLIVDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAF 97 (111)
T ss_dssp EECCTTCCS-CCCCCSSCEEEEEECSSCSSCCEEEEEECCHHHHHHHHHHTCSCHHH
T ss_pred EEechhhcc-cEEEcCCCEEEEEecccCCcceEEEEEEeCHHHHHHHHHcCCCChHH
Confidence 346666666 6776 467777743 43 35899999999988877665
No 14
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=23.39 E-value=1.4e+02 Score=26.46 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=36.0
Q ss_pred eeeccccccCchHHHHHHHHHHHHHHhhCCeEEEEEeCCCCcHHHHHHHHh
Q psy15723 9 KVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRND 59 (243)
Q Consensus 9 ~v~ltk~~Kk~~e~K~~~v~~l~e~l~~y~~v~v~~~~~l~~~ql~~lR~~ 59 (243)
+|.|+.-.....+.+.+++++|.+++.++.+++|++ +|++...++++...
T Consensus 49 vIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n-HGi~~~l~~~~~~~ 98 (356)
T 1gp6_A 49 TIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN-HGIPADLMERVKKA 98 (356)
T ss_dssp EEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES-CSCCHHHHHHHHHH
T ss_pred EEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC-CCCCHHHHHHHHHH
Confidence 344544322234557788999999999999888875 78998877776653
Done!