RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy15723
         (243 letters)



>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
           oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 654

 Score = 28.2 bits (62), Expect = 0.96
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
            + +L +  ++ ++ + V           + D L PE AR L+ L K   +  + L
Sbjct: 78  ADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSLRPEAARYLERLIKLGRRNGLHL 133


>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus
           stearothermophilus [TaxId: 1422]}
          Length = 159

 Score = 26.0 bits (57), Expect = 3.0
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 4/82 (4%)

Query: 151 PQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKK--MAKFKVLLYLWY 208
            Q RQL    ++      +       K G  +   +      + K+   A   +  YL +
Sbjct: 67  RQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALEANNYIPDYLSF 126

Query: 209 N--KKEGTFENLLDREKTPMDI 228
           +  K EGT+  L +R + P +I
Sbjct: 127 DPEKMEGTYTRLPERSELPAEI 148


>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet
           oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 665

 Score = 26.7 bits (58), Expect = 3.2
 Identities = 8/56 (14%), Positives = 21/56 (37%)

Query: 149 IEPQLRQLGLQTNLNKGVVTLFKDHTVCKKGDVLTPEQARILKLLKKKMAKFKVLL 204
            + +L +  ++ ++ + V             + + PE  R L+   K   +  + L
Sbjct: 89  ADKKLSRFDIEMSMREDVFQRIVHLQETCDLEKIKPEARRYLEKSIKMGKRNGLHL 144


>d2vk9a1 c.68.1.22 (A:2-541) Alpha-toxin {Clostridium novyi [TaxId:
           1542]}
          Length = 540

 Score = 26.4 bits (58), Expect = 3.4
 Identities = 22/132 (16%), Positives = 44/132 (33%), Gaps = 23/132 (17%)

Query: 9   KVTLSKTVKKGLERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDWKDSRFFFG 68
           +  L K     L+RK+   + ++ A+E +N     +      SKL  + N+  D+     
Sbjct: 4   REQLMKIASIPLKRKEPEYNLILDALENFNRDIEGTSVKEIYSKLSKL-NELVDNYQTKY 62

Query: 69  KNKVMAYALGKSQED----------------EIEKNIHVVSSALKGQCGLLFTNRSKDDV 112
            +     AL   ++                    KN+  +     G       ++S +  
Sbjct: 63  PSSGRNLALENFRDSLYSELRELIKNSRTSTIASKNLSFIWIG--GPIS----DQSLEYY 116

Query: 113 LMWFDVYEDEDF 124
            MW    +D + 
Sbjct: 117 NMWKMFNKDYNI 128


>d1lmla_ d.92.1.3 (A:) Leishmanolysin {Leishmania major [TaxId:
           5664]}
          Length = 475

 Score = 25.9 bits (56), Expect = 5.8
 Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)

Query: 166 VVTLFKDHTV-CKKGDVLTPEQARILK 191
            V       V C   D+LT E+  IL 
Sbjct: 32  HVKDHAGAIVTCTAEDILTNEKRDILV 58


>d1zava1 d.58.62.1 (A:1-177) Ribosomal protein L10 {Thermotoga
          maritima [TaxId: 2336]}
          Length = 177

 Score = 24.6 bits (53), Expect = 9.7
 Identities = 13/75 (17%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 21 ERKQNLRDELVKAVEKYNNIFVFSVQNMRNSKLKDVRNDW-----KDSRFFFGKNKVMAY 75
          ++K+ +  E+ +  +K + I          + L ++R+         +RF   KN ++  
Sbjct: 5  QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNL 64

Query: 76 ALGKSQEDEIEKNIH 90
          AL  ++ +  E+ + 
Sbjct: 65 ALKNAEYEGYEEFLK 79


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.133    0.380 

Gapped
Lambda     K      H
   0.267   0.0603    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 881,877
Number of extensions: 40535
Number of successful extensions: 93
Number of sequences better than 10.0: 1
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 10
Length of query: 243
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 160
Effective length of database: 1,268,006
Effective search space: 202880960
Effective search space used: 202880960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.1 bits)