RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15725
(355 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 117 bits (294), Expect = 1e-32
Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 41/188 (21%)
Query: 47 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 106
VGKT ++ RF D+F++T+ +TIGIDF +T+ L+ + ++LQ+WDTAGQERFR++ +Y
Sbjct: 17 VGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 76
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
R + ++VYDITN SF
Sbjct: 77 RGAMGIMLVYDITN-----------------------------------------EKSFD 95
Query: 167 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYN 226
WI ++ +DV M++GNK D++DKRQVS E GE+ A + + F+ETSAKA N
Sbjct: 96 NIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANIN 155
Query: 227 VKQVRLQL 234
V+ L
Sbjct: 156 VENAFFTL 163
Score = 104 bits (261), Expect = 9e-28
Identities = 53/118 (44%), Positives = 78/118 (66%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ K+++LQ+WDTAGQERFR++ +Y R + ++VYDITN SF WI ++
Sbjct: 50 LDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS 109
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+DV M++GNK D++DKRQVS E GE+ A + + F+ETSAKA NV+ F +A +
Sbjct: 110 ADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 167
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 116 bits (292), Expect = 3e-32
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 63/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK++ +G+ VGKT L+ RF +F T+ +T+GIDF
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAF----------------------LAGTFISTVGIDF 44
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+K + ++ V+LQ+WDTAGQERFRS+ +Y RD+ +++YD+T
Sbjct: 45 RNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVT-------------- 90
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ SF W+ ++ DV +ML+GNK D
Sbjct: 91 ---------------------------NKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD 123
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
+ +R V E+GE+ AKE + F+ETSAK G NV +
Sbjct: 124 SAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAI 164
Score = 108 bits (269), Expect = 5e-29
Identities = 52/114 (45%), Positives = 74/114 (64%)
Query: 229 QVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI 288
+V+LQ+WDTAGQERFRS+ +Y RD+ +++YD+TN SF W+ ++ DV
Sbjct: 55 KVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVA 114
Query: 289 IMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ML+GNK D + +R V E+GE+ AKE + F+ETSAK G NV F +A L
Sbjct: 115 LMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 168
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 114 bits (285), Expect = 3e-31
Identities = 140/221 (63%), Positives = 147/221 (66%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATI IDF
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIG-----------------------IDF 37
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
LSKTMYLEDRT+RLQLWDTAGQERFRSLIPSYIRDS AVVVYD
Sbjct: 38 LSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYD---------------- 81
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ NSF QT+KWIDDVRTERGSDVIIMLVGNKTD
Sbjct: 82 -------------------------ITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTD 116
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L+DKRQVS EEGERKAKELNVMFIETSAKAGYNVKQ+ ++
Sbjct: 117 LADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRV 157
Score = 113 bits (283), Expect = 5e-31
Identities = 108/121 (89%), Positives = 112/121 (92%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ +RLQLWDTAGQERFRSLIPSYIRDS AVVVYDITN NSF QT+KWIDDVRTERG
Sbjct: 44 LEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG 103
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG 344
SDVIIMLVGNKTDL+DKRQVS EEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG
Sbjct: 104 SDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG 163
Query: 345 M 345
M
Sbjct: 164 M 164
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 113 bits (283), Expect = 5e-31
Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 42/188 (22%)
Query: 47 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 106
VGK+ L+ RF+ D F+ ++ TIGIDF KT+ + + V+LQ+WDTAGQERFR++ +Y
Sbjct: 13 VGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYY 72
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
R + ++VYDIT+ +F +W V + ++LVG
Sbjct: 73 RGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVG------------------ 114
Query: 167 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYN 226
D + R V+ ++GE AKEL + FIE+SAK N
Sbjct: 115 ---NKSDM---------------------ETRVVTADQGEALAKELGIPFIESSAKNDDN 150
Query: 227 VKQVRLQL 234
V ++ L
Sbjct: 151 VNEIFFTL 158
Score = 101 bits (251), Expect = 2e-26
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
N K+V+LQ+WDTAGQERFR++ +Y R + ++VYDIT+ +F +W V
Sbjct: 46 INGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHAN 105
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ ++LVGNK+D+ + R V+ ++GE AKEL + FIE+SAK NV ++F +A +
Sbjct: 106 DEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 162
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 108 bits (270), Expect = 5e-29
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK+V +G VGKT L+ RF F ATI G+DF
Sbjct: 6 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATI-----------------------GVDF 42
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+ KT+ + V+LQ+WDTAGQERFRS+ SY R + ++ YDIT SF +W+ +
Sbjct: 43 MIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLRE 102
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ + VI +LVG N L+ S + ++
Sbjct: 103 IEQYASNKVITVLVG----NKIDLAERREVSQQRAEEF---------------------- 136
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
++ ++ ++ETSAK NV+++ L L
Sbjct: 137 ---------------SEAQDMYYLETSAKESDNVEKLFLDL 162
Score = 96.8 bits (240), Expect = 8e-25
Identities = 49/118 (41%), Positives = 77/118 (65%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
N ++V+LQ+WDTAGQERFRS+ SY R + ++ YDIT SF +W+ ++
Sbjct: 49 INGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS 108
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ VI +LVGNK DL+++R+VS + E ++ ++ ++ETSAK NV++LF +A L
Sbjct: 109 NKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 166
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 104 bits (260), Expect = 2e-27
Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FKL+ +G VGK+ L+ RF D++ N Y +TI G+DF
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTI-----------------------GVDF 43
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
KT+ L+ +TV+LQ+WDTAGQERFR++ SY R S ++VYD+T
Sbjct: 44 KIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVT-------------- 89
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
SF+ W+ ++ S V+ +LVGNK D
Sbjct: 90 ---------------------------DQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 122
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L DKR V + + A + F+ETSA NV+ L +
Sbjct: 123 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTM 163
Score = 92.6 bits (229), Expect = 6e-23
Identities = 50/129 (38%), Positives = 73/129 (56%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ K V+LQ+WDTAGQERFR++ SY R S ++VYD+T+ SF+ W+ ++
Sbjct: 50 LDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT 109
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG 344
S V+ +LVGNK DL DKR V + + A + F+ETSA NV+ F +A +
Sbjct: 110 STVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 169
Query: 345 MDSTENKPP 353
S +N
Sbjct: 170 SMSQQNLNE 178
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 103 bits (257), Expect = 5e-27
Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 53/217 (24%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
KL+ LG+ VGKT+ + R+ + F+ + T+ F Q G
Sbjct: 6 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVG------IDFREKRVVYNAQGPNGSS- 58
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+ V LQLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W
Sbjct: 59 ------GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNW--- 109
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ I+L+GNK D
Sbjct: 110 -------------------------------------MSQLQANAYCENPDIVLIGNKAD 132
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
L D+R+V+ + A + + + ETSA G NV++
Sbjct: 133 LPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 169
Score = 90.7 bits (224), Expect = 2e-22
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 185 IMLVGN----KTDL--------SDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRL 232
++ +G+ KT + + ++T + + K + + +G K V L
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK-VHL 66
Query: 233 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-VIIML 291
QLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+L
Sbjct: 67 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 126
Query: 292 VGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+GNK DL D+R+V+ + A + + + ETSA G NV++ + +
Sbjct: 127 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 177
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 101 bits (251), Expect = 3e-26
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 64/224 (28%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
L K++ +GE VGK+SL+ RF D+FD ATI G
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATI-----------------------G 41
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
+DF KT+ ++ +L +WDTAGQERFR+L PSY R + ++VYD+T ++F + W
Sbjct: 42 VDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNW 101
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
++++ T + I+ ++ + + +
Sbjct: 102 LNELETYCTRNDIVNMLVGNKIDKEN---------------------------------- 127
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
R+V EG + A++ +++FIE SAK V+ +L
Sbjct: 128 -------REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEEL 164
Score = 95.3 bits (236), Expect = 3e-24
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ + +L +WDTAGQERFR+L PSY R + ++VYD+T ++F + W++++ T
Sbjct: 51 VDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCT 110
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL-- 342
+ I+ ++ + R+V EG + A++ +++FIE SAK V+ F + +
Sbjct: 111 RNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 170
Query: 343 -PGM 345
PG+
Sbjct: 171 TPGL 174
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 100 bits (250), Expect = 3e-26
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK + +G+ VGK+ L + +F F TIG++F
Sbjct: 5 FKYIIIGDMGVGKSCL-----------------------LHQFTEKKFMADCPHTIGVEF 41
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
++ + + + ++LQ+WDTAGQERFR++ SY R + A++VYDIT
Sbjct: 42 GTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITR------------- 88
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
++++ S W+ D R + +I+L+GNK D
Sbjct: 89 ----------------------------RSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 120
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L +R V+ EE ++ A+E ++F+E SAK G NV+ L+
Sbjct: 121 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEA 161
Score = 96.9 bits (240), Expect = 8e-25
Identities = 48/118 (40%), Positives = 78/118 (66%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ ++++LQ+WDTAGQERFR++ SY R + A++VYDIT ++++ S W+ D R
Sbjct: 48 VSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTN 107
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ +I+L+GNK DL +R V+ EE ++ A+E ++F+E SAK G NV+ F A +
Sbjct: 108 PNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 100 bits (250), Expect = 4e-26
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK+V +G+ VGK++L ++RF + F+ ++TIG++F
Sbjct: 5 FKVVLIGDSGVGKSNL-----------------------LSRFTRNEFNLESKSTIGVEF 41
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
++++ ++ +T++ Q+WDTAGQER+R + +Y R + A++VYDI
Sbjct: 42 ATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDI--------------- 86
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
++ +W+ ++R S+++IMLVGNK+D
Sbjct: 87 --------------------------AKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 120
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L R V T+E A++ N+ FIETSA NV++ +
Sbjct: 121 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNI 161
Score = 94.9 bits (235), Expect = 6e-24
Identities = 45/115 (39%), Positives = 73/115 (63%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDV 287
K ++ Q+WDTAGQER+R + +Y R + A++VYDI ++ +W+ ++R S++
Sbjct: 51 KTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 110
Query: 288 IIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+IMLVGNK+DL R V T+E A++ N+ FIETSA NV++ F+ + +
Sbjct: 111 VIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 165
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 100 bits (249), Expect = 4e-26
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK++ +G SVGKTS + R+ DSF + +T+ GIDF
Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTV-----------------------GIDF 42
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
KT+Y D+ ++LQ+WDTAGQER+R++ +Y R + +++YDI
Sbjct: 43 KVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDI--------------- 87
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ SF+ W ++T + ++LVGNK D
Sbjct: 88 --------------------------TNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 121
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
+ D+R VS+E G + A L F E SAK NVKQ +L
Sbjct: 122 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 162
Score = 95.3 bits (236), Expect = 3e-24
Identities = 49/118 (41%), Positives = 73/118 (61%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
N K+++LQ+WDTAGQER+R++ +Y R + +++YDITN SF+ W ++T
Sbjct: 49 RNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSW 108
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ ++LVGNK D+ D+R VS+E G + A L F E SAK NVKQ F R+ +
Sbjct: 109 DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 166
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 99 bits (248), Expect = 6e-26
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 64/224 (28%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
+R++K+V LG VGK++L +F+ +F Y TI
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI------------------------ 36
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
DF K + ++ L++ DTAG E+F S+ YI++ ++VY + N SF
Sbjct: 37 EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPM 96
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
D + + + V ++LVGN
Sbjct: 97 RDQIIRVKRYE----------------------------------------KVPVILVGN 116
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
K DL +R+VS+ EG A+E F+ETSAK+ V ++ ++
Sbjct: 117 KVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEI 160
Score = 82.3 bits (202), Expect = 2e-19
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ L++ DTAG E+F S+ YI++ ++VY + N SF D + +
Sbjct: 46 VDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKR 105
Query: 285 -SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
V ++LVGNK DL +R+VS+ EG A+E F+ETSAK+ V +LF + +
Sbjct: 106 YEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 96.2 bits (238), Expect = 2e-24
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 64/227 (28%)
Query: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQA 67
GN + +FKLV LGE +VGK+SL + RF+ F ++
Sbjct: 1 GNKICQFKLVLLGESAVGKSSL-----------------------VLRFVKGQFHEFQES 37
Query: 68 TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 127
TIG FL++T+ L+D TV+ ++WDTAGQER+ SL P Y R + A+VVYDIT
Sbjct: 38 TIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIT-------- 89
Query: 128 SKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIML 187
+ SF + W+ +++ + +++I L
Sbjct: 90 ---------------------------------NEESFARAKNWVKELQRQASPNIVIAL 116
Query: 188 VGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
GNK DL++KR V +E + A + +++F+ETSAK NV ++ + +
Sbjct: 117 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAI 163
Score = 85.1 bits (209), Expect = 2e-20
Identities = 49/119 (41%), Positives = 77/119 (64%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ V+ ++WDTAGQER+ SL P Y R + A+VVYDITN SF + W+ +++ +
Sbjct: 50 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS 109
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
+++I L GNK DL++KR V +E + A + +++F+ETSAK NV ++F +A LP
Sbjct: 110 PNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 94.9 bits (235), Expect = 6e-24
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK + +G+ VGK+ L+ +F F + TI ++F
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIG-----------------------VEF 40
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
++ + ++ + ++LQ+WDTAGQE FRS+ SY R + A++VYDI
Sbjct: 41 GARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDI--------------- 85
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+F+ + W++D R S+++IML+GNK+D
Sbjct: 86 --------------------------TRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 119
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L +R V EEGE A+E ++F+ETSAK NV++ +
Sbjct: 120 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINT 160
Score = 89.2 bits (220), Expect = 6e-22
Identities = 55/132 (41%), Positives = 84/132 (63%)
Query: 211 ELNVMFIETSAKAGYNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFH 270
+L + + + KQ++LQ+WDTAGQE FRS+ SY R + A++VYDIT +F+
Sbjct: 33 DLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFN 92
Query: 271 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYN 330
+ W++D R S+++IML+GNK+DL +R V EEGE A+E ++F+ETSAK N
Sbjct: 93 HLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACN 152
Query: 331 VKQLFRRVAAAL 342
V++ F A +
Sbjct: 153 VEEAFINTAKEI 164
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 91.1 bits (225), Expect = 1e-22
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK + +G GK+ L+ +F+ F + TI ++F
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIG-----------------------VEF 42
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
SK + + + V+LQ+WDTAGQERFRS+ SY R + A++VYDIT+
Sbjct: 43 GSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITS------------- 89
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ L+ ++ S+ ++I+L GNK D
Sbjct: 90 -----------------RETYNALTNWLTDARMLASQN-----------IVIILCGNKKD 121
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
L R+V+ E R A+E +MF+ETSA G NV++ +Q
Sbjct: 122 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQC 162
Score = 89.2 bits (220), Expect = 6e-22
Identities = 51/118 (43%), Positives = 76/118 (64%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
K V+LQ+WDTAGQERFRS+ SY R + A++VYDIT+ +++ + W+ D R
Sbjct: 49 VGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLAS 108
Query: 285 SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+++I+L GNK DL R+V+ E R A+E +MF+ETSA G NV++ F + A +
Sbjct: 109 QNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 89.2 bits (220), Expect = 7e-22
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 62/222 (27%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK++ LG+ VGK+SL+ R++ + FD TI ++F
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIG-----------------------VEF 43
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
L+K + ++ V +Q+WDTAGQERFRSL + R S ++ + + ++ SF S W +
Sbjct: 44 LNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKE 103
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ +++GNK D
Sbjct: 104 FIYYA-------------------------------------DVKEPESFPFVILGNKID 126
Query: 194 LSDKRQVSTEEGERKAKEL-NVMFIETSAKAGYNVKQVRLQL 234
+S+ RQVSTEE + ++ + + ETSAK NV +
Sbjct: 127 ISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEA 167
Score = 73.1 bits (178), Expect = 4e-16
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVR----TER 283
V +Q+WDTAGQERFRSL + R S ++ + + ++ SF S W + +
Sbjct: 53 HFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKE 112
Query: 284 GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKEL-NVMFIETSAKAGYNVKQLFRRVAAAL 342
+++GNK D+S+ RQVSTEE + ++ + + ETSAK NV F +
Sbjct: 113 PESFPFVILGNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 88.1 bits (217), Expect = 2e-21
Identities = 59/224 (26%), Positives = 92/224 (41%), Gaps = 64/224 (28%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
L K++ +G VGK++L +FMYD F Y+
Sbjct: 2 LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYE------------------------PTK 37
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
D K + L+ V++ + DTAGQE + ++ +Y R + V+ IT SF T+ +
Sbjct: 38 ADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADF 97
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ + + + +V +LVGN
Sbjct: 98 REQILRVKEDE----------------------------------------NVPFLLVGN 117
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
K+DL DKRQVS EE + +A + NV ++ETSAK NV +V L
Sbjct: 118 KSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDL 161
Score = 77.3 bits (189), Expect = 1e-17
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS-DVIIMLVG 293
DTAGQE + ++ +Y R + V+ IT SF T+ + + + + +V +LVG
Sbjct: 57 LDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVG 116
Query: 294 NKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
NK+DL DKRQVS EE + +A + NV ++ETSAK NV ++F + +
Sbjct: 117 NKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI 165
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 87.0 bits (214), Expect = 4e-21
Identities = 50/224 (22%), Positives = 85/224 (37%), Gaps = 65/224 (29%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
+ ++KLV +G VGK++L + + + F + Y TI
Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE----------------------- 37
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
D K + ++ T L + DTAGQE + ++ Y+R + V+ I N SF ++
Sbjct: 38 -DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQY 96
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ ++ + SD DV ++LVGN
Sbjct: 97 REQIKRVKDSD----------------------------------------DVPMVLVGN 116
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
K D R V + + + A+ + +IETSAK V+ L
Sbjct: 117 KCD-LAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTL 159
Score = 73.9 bits (180), Expect = 2e-16
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ + L + DTAGQE + ++ Y+R + V+ I N SF ++ + ++ +
Sbjct: 46 IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKD 105
Query: 285 -SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
DV ++LVGNK D R V + + + A+ + +IETSAK V+ F + +
Sbjct: 106 SDDVPMVLVGNKCD-LAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 85.8 bits (211), Expect = 2e-20
Identities = 48/236 (20%), Positives = 78/236 (33%), Gaps = 79/236 (33%)
Query: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQA 67
G+P + K V +G+ +VGKT L+ + ++F Y T+
Sbjct: 1 GSP-QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV--------------------- 38
Query: 68 TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQT 127
D S + ++ + V L LWDTAGQE + L P + V+++ + +
Sbjct: 39 ---FDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLV-------- 87
Query: 128 SKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIML 187
SF + I+L
Sbjct: 88 ---------------------------------SPASFENVRAKWYPEVRHHCPNTPIIL 114
Query: 188 VGNKTDLSDKRQVSTE------------EGERKAKELN-VMFIETSAKAGYNVKQV 230
VG K DL D + + +G AKE+ V ++E SA +K V
Sbjct: 115 VGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTV 170
Score = 74.7 bits (182), Expect = 2e-16
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 231 RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIM 290
L LWDTAGQE + L P + V+++ + + + SF + I+
Sbjct: 54 NLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPII 113
Query: 291 LVGNKTDLSDKRQVSTE------------EGERKAKELN-VMFIETSAKAGYNVKQLFRR 337
LVG K DL D + + +G AKE+ V ++E SA +K +F
Sbjct: 114 LVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDE 173
Query: 338 VAAAL 342
A+
Sbjct: 174 AIRAV 178
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 85.1 bits (209), Expect = 3e-20
Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 78/233 (33%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
++ K V +G+ +VGKT L+ + + F + Y T+
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV------------------------ 36
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
D + T+ + L L+DTAGQE + L P + V +V + +
Sbjct: 37 FDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV----------- 85
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+SF + T +LVG
Sbjct: 86 ------------------------------SPSSFENVKEKWVPEITHHCPKTPFLLVGT 115
Query: 191 KTDLSDKRQV------------STEEGERKAKELNVM-FIETSAKAGYNVKQV 230
+ DL D + E E+ A++L + ++E SA +K V
Sbjct: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168
Score = 72.3 bits (176), Expect = 1e-15
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 13/128 (10%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDV 287
+ L L+DTAGQE + L P + V +V + + + +SF + T
Sbjct: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108
Query: 288 IIMLVGNKTDLSDKRQV------------STEEGERKAKELNVM-FIETSAKAGYNVKQL 334
+LVG + DL D + E E+ A++L + ++E SA +K +
Sbjct: 109 PFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168
Query: 335 FRRVAAAL 342
F A
Sbjct: 169 FDEAILAA 176
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 83.9 bits (206), Expect = 4e-20
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 67/227 (29%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R FK++ +G+ +VGKT L RF F + +ATIG+
Sbjct: 1 RIFKIIVIGDSNVGKTCL-----------------------TYRFCAGRFPDRTEATIGV 37
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSL-IPSYIRDSTVAVVVYDITNANSFHQTSKW 130
DF + + ++ +++QLWDTAGQERFR + Y R+ V VYD+TN SFH W
Sbjct: 38 DFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAW 97
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
I++ + ++ D+ +LVGN
Sbjct: 98 IEECKQHLLAN----------------------------------------DIPRILVGN 117
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKA---GYNVKQVRLQL 234
K DL QV T+ ++ A ++ ETSAK +V+ + + L
Sbjct: 118 KCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTL 164
Score = 70.8 bits (172), Expect = 2e-15
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 225 YNVKQVRLQLWDTAGQERFRSL-IPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTER 283
+ +++++QLWDTAGQERFR + Y R+ V VYD+TN SFH WI++ +
Sbjct: 46 IDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHL 105
Query: 284 GS-DVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKA---GYNVKQLFRRVA 339
+ D+ +LVGNK DL QV T+ ++ A ++ ETSAK +V+ +F +A
Sbjct: 106 LANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 165
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 84.2 bits (207), Expect = 4e-20
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 64/221 (28%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
FK+V LGE VGKTSL+ R+ + F++ + T+ F
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLG-----------------------ASF 40
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
L+K + + + V L +WDTAGQERF +L P Y RDS A++VYDIT+ +SF + W+ +
Sbjct: 41 LTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKE 100
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+R G+++ + +VG N L S + +
Sbjct: 101 LRKMLGNEICLCIVG----NKIDLEKERHVSIQEAESY---------------------- 134
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
A+ + TSAK ++++ L L
Sbjct: 135 ---------------AESVGAKHYHTSAKQNKGIEELFLDL 160
Score = 78.8 bits (193), Expect = 4e-18
Identities = 47/115 (40%), Positives = 72/115 (62%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDV 287
K+V L +WDTAGQERF +L P Y RDS A++VYDIT+ +SF + W+ ++R G+++
Sbjct: 50 KRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEI 109
Query: 288 IIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ +VGNK DL +R VS +E E A+ + TSAK +++LF + +
Sbjct: 110 CLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 164
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 83.6 bits (205), Expect = 6e-20
Identities = 51/225 (22%), Positives = 78/225 (34%), Gaps = 64/225 (28%)
Query: 10 PLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATI 69
P KLV +G VGK++L +F+ F + Y
Sbjct: 3 PSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYD------------------------PT 38
Query: 70 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK 129
D +K ++ RL + DTAGQE F ++ Y+R ++V+ I + SF++ K
Sbjct: 39 IEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGK 98
Query: 130 WIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVG 189
+ + D + +LVG
Sbjct: 99 LFTQILRVKDRDDFPV----------------------------------------VLVG 118
Query: 190 NKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
NK DL +RQV E +V + E SAK NV + QL
Sbjct: 119 NKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQL 163
Score = 66.6 bits (161), Expect = 8e-14
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ RL + DTAGQE F ++ Y+R ++V+ I + SF++ K + +
Sbjct: 49 VDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKD 108
Query: 285 SD-VIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
D ++LVGNK DL +RQV E +V + E SAK NV + F ++ A+
Sbjct: 109 RDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAV 167
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 83.5 bits (205), Expect = 7e-20
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 64/223 (28%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
K++LV +G VGK++L +F+ F Y
Sbjct: 4 EKYRLVVVGGGGVGKSALTIQFIQSYFVTDYD------------------------PTIE 39
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
D +K ++DR RL + DTAGQE F ++ Y+R ++V+ +T+ SF + K+
Sbjct: 40 DSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKF- 98
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+R + + ++L+GNK
Sbjct: 99 ---------------------------------------QRQILRVKDRDEFPMILIGNK 119
Query: 192 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
DL +RQV+ EEG++ A++L V ++E SAK NV Q +L
Sbjct: 120 ADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHEL 162
Score = 70.1 bits (170), Expect = 5e-15
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD-VRTER 283
+ + RL + DTAGQE F ++ Y+R ++V+ +T+ SF + K+ +R +
Sbjct: 48 IDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKD 107
Query: 284 GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+ ++L+GNK DL +RQV+ EEG++ A++L V ++E SAK NV Q F + +
Sbjct: 108 RDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVI 166
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 83.9 bits (206), Expect = 8e-20
Identities = 42/218 (19%), Positives = 74/218 (33%), Gaps = 54/218 (24%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
K V +G+ +VGKT L+ + D+F Y T+ D
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV------------------------FDH 45
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+ ++ + + L L+DTAGQE + L P + V ++ + + N SF +
Sbjct: 46 YAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVP 105
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
E +V +L+G L
Sbjct: 106 ELKEYAPNVPFLLIG----TQIDLRDDPKTLARLNDMKE--------------------- 140
Query: 194 LSDKRQVSTEEGERKAKELNVM-FIETSAKAGYNVKQV 230
+ + E+G++ AKE+ ++E SA +K V
Sbjct: 141 ----KPICVEQGQKLAKEIGACCYVECSALTQKGLKTV 174
Score = 70.0 bits (170), Expect = 6e-15
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 229 QVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI 288
Q L L+DTAGQE + L P + V ++ + + N SF + E +V
Sbjct: 56 QYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVP 115
Query: 289 IMLVGNKTDLSDKRQ------------VSTEEGERKAKELNVM-FIETSAKAGYNVKQLF 335
+L+G + DL D + + E+G++ AKE+ ++E SA +K +F
Sbjct: 116 FLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVF 175
Query: 336 RRVAAA 341
A
Sbjct: 176 DEAIIA 181
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 83.1 bits (204), Expect = 9e-20
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 64/224 (28%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
LR+ K+ LG+ VGK+S++ RF+ DSFD TI
Sbjct: 2 LRELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIG----------------------- 38
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
F++KT+ ++ + +WDTAG ERFR+L P Y R S A++VYDI
Sbjct: 39 ASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMYYRGSAAAIIVYDI------------ 86
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+F W+ ++R +++ + GN
Sbjct: 87 -----------------------------TKEETFSTLKNWVRELRQHGPPSIVVAIAGN 117
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
K DL+D R+V + + A ++ +F+ETSAK N+ ++ +++
Sbjct: 118 KCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEI 161
Score = 77.7 bits (190), Expect = 9e-18
Identities = 42/111 (37%), Positives = 67/111 (60%)
Query: 233 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLV 292
+WDTAG ERFR+L P Y R S A++VYDIT +F W+ ++R +++ +
Sbjct: 56 LIWDTAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIA 115
Query: 293 GNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
GNK DL+D R+V + + A ++ +F+ETSAK N+ +LF ++ +P
Sbjct: 116 GNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 166
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 81.6 bits (200), Expect = 3e-19
Identities = 54/225 (24%), Positives = 94/225 (41%), Gaps = 65/225 (28%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
+R++KLV LG VGK++L +F+ F Y TI
Sbjct: 1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI------------------------ 36
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
D K + ++ + L++ DTAG E+F ++ Y+++ +VY IT ++F+
Sbjct: 37 EDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDL 96
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ + + ++ DV ++LVGN
Sbjct: 97 REQILRVKDTE----------------------------------------DVPMILVGN 116
Query: 191 KTDLSDKRQVSTEEGERKAKE-LNVMFIETSAKAGYNVKQVRLQL 234
K DL D+R V E+G+ A++ N F+E+SAK+ NV ++ L
Sbjct: 117 KCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDL 161
Score = 66.2 bits (160), Expect = 1e-13
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTER 283
+ +Q L++ DTAG E+F ++ Y+++ +VY IT ++F+ + + R +
Sbjct: 46 VDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD 105
Query: 284 GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKE-LNVMFIETSAKAGYNVKQLFRRVAAAL 342
DV ++LVGNK DL D+R V E+G+ A++ N F+E+SAK+ NV ++F + +
Sbjct: 106 TEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 79.7 bits (195), Expect = 2e-18
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 38/188 (20%)
Query: 47 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 106
VGK+S++ RF+ + F + TIG FL++ + + + TV+ ++WDTAGQERF SL P Y
Sbjct: 14 VGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYY 73
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
R++ A+VVYD+T SF + W+ ++ + D+II LVG+
Sbjct: 74 RNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE---------- 123
Query: 167 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYN 226
+R+V+ EEGE+ A+E ++F ETSAK G N
Sbjct: 124 ----------------------------GGERKVAREEGEKLAEEKGLLFFETSAKTGEN 155
Query: 227 VKQVRLQL 234
V V L +
Sbjct: 156 VNDVFLGI 163
Score = 76.2 bits (186), Expect = 3e-17
Identities = 51/112 (45%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGN 294
WDTAGQERF SL P Y R++ A+VVYD+T SF + W+ ++ + D+II LVGN
Sbjct: 57 WDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGN 116
Query: 295 KTDL---SDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
K D+ +R+V+ EEGE+ A+E ++F ETSAK G NV +F + +P
Sbjct: 117 KIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 76.9 bits (188), Expect = 2e-17
Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 73/227 (32%)
Query: 7 FGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQ 66
FGN ++ +++ LG + GKT+++ + T
Sbjct: 8 FGN--KEMRILMLGLDAAGKTTILYKLKLGQSVTTIP----------------------- 42
Query: 67 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ 126
+ F +T+ + V+ +WD GQ++ R L Y + + V D + + +
Sbjct: 43 ---TVGFNVETVT--YKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDE 97
Query: 127 TSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIM 186
+ + D II+
Sbjct: 98 ARQE----------------------------------------LHRIINDREMRDAIIL 117
Query: 187 LVGNKTDLSDKR---QVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
+ NK DL D ++ + G + ++ N + A +G + +
Sbjct: 118 IFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEG 164
Score = 71.1 bits (173), Expect = 2e-15
Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
K V+ +WD GQ++ R L Y + + V D + + + + + + +R
Sbjct: 51 VTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDRE 110
Query: 285 -SDVIIMLVGNKTDLSDKR---QVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 340
D II++ NK DL D ++ + G + ++ N + A +G + + + +
Sbjct: 111 MRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTS 170
Query: 341 AL 342
Sbjct: 171 NY 172
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 77.0 bits (188), Expect = 2e-17
Identities = 45/219 (20%), Positives = 74/219 (33%), Gaps = 54/219 (24%)
Query: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGID 72
+ KLV +G+ + GKT L+ D F Y T+ +
Sbjct: 2 RKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVF------------------------E 37
Query: 73 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWID 132
+ ++ + V L LWDTAG E + L P D+ V ++ + I + +S +
Sbjct: 38 NYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT 97
Query: 133 DVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 192
+V I+LV +D T R +
Sbjct: 98 PEVKHFCPNVPIILV------------------GNKKDLRNDEHTRR-----------EL 128
Query: 193 DLSDKRQVSTEEGERKAKELNVM-FIETSAKAGYNVKQV 230
+ V EEG A + ++E SAK V++V
Sbjct: 129 AKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 167
Score = 64.6 bits (156), Expect = 4e-13
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 13/131 (9%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ KQV L LWDTAG E + L P D+ V ++ + I + +S +
Sbjct: 45 VDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC 104
Query: 285 SDVIIMLVGNKTDLSDKRQV------------STEEGERKAKELNVM-FIETSAKAGYNV 331
+V I+LVGNK DL + EEG A + ++E SAK V
Sbjct: 105 PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV 164
Query: 332 KQLFRRVAAAL 342
+++F A
Sbjct: 165 REVFEMATRAA 175
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 76.3 bits (186), Expect = 4e-17
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 60/217 (27%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
K++ LG+ VGKTSL + +++ F N Y+ATIG DF
Sbjct: 3 LKVIILGDSGVGKTSL-----------------------MNQYVNKKFSNQYKATIGADF 39
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
L+K + ++DR V +Q+WDTAGQERF+SL ++ R + V+V+D+T N+F
Sbjct: 40 LTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFK-------- 91
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+++ + +++GNK D
Sbjct: 92 -----------------------------TLDSWRDEFLIQASPRDPENFPFVVLGNKID 122
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
L +++ + + N+ + ETSAK NV+Q
Sbjct: 123 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 159
Score = 60.1 bits (144), Expect = 2e-11
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 7/134 (5%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS-- 285
+ V +Q+WDTAGQERF+SL ++ R + V+V+D+T N+F W D+ +
Sbjct: 49 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 108
Query: 286 --DVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL- 342
+ +++GNK DL +++ + + N+ + ETSAK NV+Q F+ +A
Sbjct: 109 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168
Query: 343 --PGMDSTENKPPE 354
N+ PE
Sbjct: 169 KQETEVELYNEFPE 182
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 75.1 bits (183), Expect = 8e-17
Identities = 53/223 (23%), Positives = 86/223 (38%), Gaps = 61/223 (27%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
K++ LG+ VGKTSL+ R++ D + Y+ATI + T
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM-------- 54
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
Q+WDTAGQERF+SL ++ R + V+VYD+TNA+SF
Sbjct: 55 --------------QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFE-------- 92
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
N +++ +++GNK D
Sbjct: 93 -----------------------------NIKSWRDEFLVHANVNSPETFPFVILGNKID 123
Query: 194 LSDKRQVSTE-EGERKAKEL-NVMFIETSAKAGYNVKQVRLQL 234
+ +++ +E + AK L ++ TSAK NV ++
Sbjct: 124 AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEI 166
Score = 62.8 bits (151), Expect = 2e-12
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 185 IMLVGN----KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQLWDTAGQ 240
++++G+ KT L + ++ ++ K T K +Q+WDTAGQ
Sbjct: 5 VIILGDSGVGKTSLM--HRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 241 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGS----DVIIMLVGNKT 296
ERF+SL ++ R + V+VYD+TNA+SF W D+ +++GNK
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKI 122
Query: 297 DLSDKRQVSTEEG-ERKAKEL-NVMFIETSAKAGYNVKQLFRRVAAAL 342
D + +++ +E+ + AK L ++ TSAK NV F +A +
Sbjct: 123 DAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 74.6 bits (182), Expect = 2e-16
Identities = 36/222 (16%), Positives = 66/222 (29%), Gaps = 71/222 (31%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
++ +++ LG GKT+++ R T TIG
Sbjct: 16 KELRILILGLDGAGKTTILYRLQIGEVVTTKP------------------------TIGF 51
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ L + ++L +WD GQ R Y D+ + V D T+ + SK
Sbjct: 52 NV----ETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKE- 106
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
++ E D +++ NK
Sbjct: 107 ---------------------------------------LHLMLQEEELQDAALLVFANK 127
Query: 192 TDLSD---KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
D +VS E + K+ + + +SA G + +
Sbjct: 128 QDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEG 169
Score = 70.8 bits (172), Expect = 3e-15
Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 16/166 (9%)
Query: 185 IMLVGN----KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQLWDTAGQ 240
I+++G KT + + Q+ + NV + K ++L +WD GQ
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSY--------KNLKLNVWDLGGQ 71
Query: 241 ERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIML-VGNKTDLS 299
R Y D+ + V D T+ + SK + + E +L NK D
Sbjct: 72 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQP 131
Query: 300 D---KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+VS E + K+ + + +SA G + + + +
Sbjct: 132 GALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 177
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 74.3 bits (181), Expect = 2e-16
Identities = 43/216 (19%), Positives = 78/216 (36%), Gaps = 54/216 (25%)
Query: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGID 72
K K+V +G+ GKT+L+ F D F Y T+ +
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTV------------------------FE 37
Query: 73 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWID 132
+ + ++ + + L LWDT+G + ++ P DS ++ +DI+ + K
Sbjct: 38 NYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWK 97
Query: 133 DVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 192
E + ++LVG D+RT+ + V +
Sbjct: 98 GEIQEFCPNTKMLLVG----------------------CKSDLRTDVSTLV-------EL 128
Query: 193 DLSDKRQVSTEEGERKAKELNVM-FIETSAKAGYNV 227
+ VS ++G AK++ +IE SA N
Sbjct: 129 SNHRQTPVSYDQGANMAKQIGAATYIECSALQSENS 164
Score = 65.8 bits (159), Expect = 2e-13
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ +++ L LWDT+G + ++ P DS ++ +DI+ + K E
Sbjct: 45 IDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC 104
Query: 285 SDVIIMLVGNKTDLSD------------KRQVSTEEGERKAKELNVM-FIETSAKAGYN- 330
+ ++LVG K+DL + VS ++G AK++ +IE SA N
Sbjct: 105 PNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENS 164
Query: 331 VKQLFRRVAAAL 342
V+ +F A
Sbjct: 165 VRDIFHVATLAC 176
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 72.8 bits (177), Expect = 4e-16
Identities = 61/188 (32%), Positives = 81/188 (43%), Gaps = 42/188 (22%)
Query: 47 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 106
VGK+S+I R+ F Y+ TIG+DFL + + + D VRL LWDTAGQE F ++ +Y
Sbjct: 13 VGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYY 72
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
R + V+V+ T+ SF S W + V E G
Sbjct: 73 RGAQACVLVFSTTDRESFEAISSWREKVVAEVG--------------------------- 105
Query: 167 QTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYN 226
D+ LV NK DL D + EE E AK L + F TS K N
Sbjct: 106 ---------------DIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLN 150
Query: 227 VKQVRLQL 234
V +V L
Sbjct: 151 VSEVFKYL 158
Score = 66.7 bits (161), Expect = 6e-14
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Query: 228 KQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDV 287
+ VRL LWDTAGQE F ++ +Y R + V+V+ T+ SF S W + V E G D+
Sbjct: 49 EDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DI 107
Query: 288 IIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 339
LV NK DL D + EE E AK L + F TS K NV ++F+ +A
Sbjct: 108 PTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLA 159
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 72.8 bits (177), Expect = 5e-16
Identities = 50/222 (22%), Positives = 81/222 (36%), Gaps = 65/222 (29%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
+KLV +G+ VGK++L +F F Y TI D
Sbjct: 5 YKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTI------------------------EDS 40
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
K ++++ L + DTAGQE F ++ Y+R ++VY +
Sbjct: 41 YLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSV--------------- 85
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
A+ H +R + ++LV NK D
Sbjct: 86 -------------------------TDKASFEHVDRFHQLILRVKDRESFPMILVANKVD 120
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAG-YNVKQVRLQL 234
L R+V+ ++G+ A + N+ +IETSAK NV + L
Sbjct: 121 LMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDL 162
Score = 62.8 bits (151), Expect = 2e-12
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTER 283
+ + L + DTAGQE F ++ Y+R ++VY +T+ SF ++ + R +
Sbjct: 47 IDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKD 106
Query: 284 GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAG-YNVKQLFRRVA 339
++LV NK DL R+V+ ++G+ A + N+ +IETSAK NV + F +
Sbjct: 107 RESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLV 163
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 70.8 bits (172), Expect = 2e-15
Identities = 21/216 (9%), Positives = 61/216 (28%), Gaps = 65/216 (30%)
Query: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFL 74
+++ +G + GKT+++ + T
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEIV----------------------------TTIPTIG 33
Query: 75 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV 134
+E + + +WD GQ++ R L Y +++ + V D + ++ + + +
Sbjct: 34 FNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRM 93
Query: 135 RTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 194
E ++ ++ + +
Sbjct: 94 LAEDELRDAVL-------------------------------------LVFANKQDLPNA 116
Query: 195 SDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
+ +++ + G + N T A +G + +
Sbjct: 117 MNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEG 152
Score = 67.0 bits (162), Expect = 4e-14
Identities = 21/122 (17%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITN-ANSFHQTSKWIDDVRTER 283
K + +WD GQ++ R L Y +++ + V D + + + + +
Sbjct: 39 VEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDE 98
Query: 284 GSDVIIMLVGNKTDLSD---KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 340
D ++++ NK DL + +++ + G + N T A +G + + ++
Sbjct: 99 LRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSN 158
Query: 341 AL 342
L
Sbjct: 159 QL 160
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 68.5 bits (166), Expect = 2e-14
Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 63/217 (29%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
+++ G VGK+SL+ RF+ +F + Y T+ +
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRES-----------------------YIPTVEDTY 39
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+ + + LQ+ DT G +F ++ I ++VY IT+ S + +
Sbjct: 40 -RQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQ 98
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ +G + IMLVGNK D
Sbjct: 99 ICEIKGDV---------------------------------------ESIPIMLVGNKCD 119
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
S R+V + E E A+ F+ETSAK +NVK++
Sbjct: 120 ESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKEL 156
Score = 61.5 bits (148), Expect = 4e-12
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ LQ+ DT G +F ++ I ++VY IT+ S + + + +G
Sbjct: 45 CDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKG 104
Query: 285 --SDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 339
+ IMLVGNK D S R+V + E E A+ F+ETSAK +NVK+LF+ +
Sbjct: 105 DVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELL 161
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 67.4 bits (163), Expect = 4e-14
Identities = 43/222 (19%), Positives = 83/222 (37%), Gaps = 67/222 (30%)
Query: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGID 72
+FKLV +G+ GKT+ + R + F+ Y AT+ ++
Sbjct: 3 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG-----------------------VE 39
Query: 73 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWID 132
+ ++ +WDTAGQE+F L Y + A++++D+T+ ++ W
Sbjct: 40 VHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHR 99
Query: 133 DVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKT 192
D+ ++ I+L GNK
Sbjct: 100 DLVRV------------------------------------------CENIPIVLCGNKV 117
Query: 193 DLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
D+ D++ + ++ N+ + + SAK+ YN ++ L L
Sbjct: 118 DIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWL 157
Score = 57.4 bits (137), Expect = 1e-10
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGN 294
WDTAGQE+F L Y + A++++D+T+ ++ W D+ ++ I+L GN
Sbjct: 57 WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV-CENIPIVLCGN 115
Query: 295 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTE 349
K D+ D++ + ++ N+ + + SAK+ YN ++ F +A L G + E
Sbjct: 116 KVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLE 168
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 66.7 bits (161), Expect = 8e-14
Identities = 47/219 (21%), Positives = 73/219 (33%), Gaps = 64/219 (29%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
+ K+ LG +SVGK+SL +F+ F ++Y TI
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTI------------------------E 38
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ +K + + + LQL DTAGQ+ + +Y D
Sbjct: 39 NTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGY------------------- 79
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+ + + + IMLVGNK
Sbjct: 80 ---------------------ILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNK 118
Query: 192 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
DL +R +S EEG+ A+ N F+E+SAK V
Sbjct: 119 KDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDV 157
Score = 55.5 bits (132), Expect = 5e-10
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
N ++ LQL DTAGQ+ + +Y D ++VY +T+ SF + G
Sbjct: 47 VNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVG 106
Query: 285 S-DVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 339
+ IMLVGNK DL +R +S EEG+ A+ N F+E+SAK +FRR+
Sbjct: 107 KVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRII 162
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 66.2 bits (160), Expect = 9e-14
Identities = 56/222 (25%), Positives = 81/222 (36%), Gaps = 66/222 (29%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
KL G VGK++L+ RF+ F Y T+
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTL------------------------EST 38
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
++D V +++ DTAGQE ++R V+VYDIT+ SF +
Sbjct: 39 YRHQATIDDEVVSMEILDTAGQEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPL--- 94
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
++ +V ++LVGNK D
Sbjct: 95 -------------------------------------KNILDEIKKPKNVTLILVGNKAD 117
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGY-NVKQVRLQL 234
L RQVSTEEGE+ A EL F E SA G N+ ++ +L
Sbjct: 118 LDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYEL 159
Score = 58.1 bits (139), Expect = 7e-11
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 3/120 (2%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ + V +++ DTAGQE ++R V+VYDIT+ SF + + + +
Sbjct: 45 IDDEVVSMEILDTAGQEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK 103
Query: 285 S-DVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGY-NVKQLFRRVAAAL 342
+V ++LVGNK DL RQVSTEEGE+ A EL F E SA G N+ ++F + +
Sbjct: 104 PKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREV 163
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 65.8 bits (159), Expect = 2e-13
Identities = 30/222 (13%), Positives = 60/222 (27%), Gaps = 71/222 (31%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
++ K++ +G + GKT+++ +F + +T
Sbjct: 14 QEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGS------------------------ 49
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ R +WD GQE RS +Y ++ +VV D T+ T +
Sbjct: 50 ----NVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREE- 104
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+ E +++ NK
Sbjct: 105 ---------------------------------------LYKMLAHEDLRKAGLLIFANK 125
Query: 192 TDLSDK---RQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
D+ + ++S K+ A G + Q
Sbjct: 126 QDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQG 167
Score = 63.9 bits (154), Expect = 9e-13
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 229 QVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-V 287
R +WD GQE RS +Y ++ +VV D T+ T + + +
Sbjct: 58 NTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKA 117
Query: 288 IIMLVGNKTDLSDK---RQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 342
+++ NK D+ + ++S K+ A G + Q + + L
Sbjct: 118 GLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 65.4 bits (158), Expect = 3e-13
Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 71/227 (31%)
Query: 7 FGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQ 66
P ++ +++ LG + GKT+L+ + + +
Sbjct: 10 KSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITP----------------------- 46
Query: 67 ATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQ 126
T G + S + +L +WD GQ + R SY ++ + + V D + F +
Sbjct: 47 -TQGFNIKSVQS----QGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEE 101
Query: 127 TSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIM 186
T + + + E+ S V ++
Sbjct: 102 TGQE----------------------------------------LTELLEEEKLSCVPVL 121
Query: 187 LVGNKTDLSDKRQ---VSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
+ NK DL ++ ++ SA G V+
Sbjct: 122 IFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDG 168
Score = 61.9 bits (149), Expect = 4e-12
Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-R 283
+ +L +WD GQ + R SY ++ + + V D + F +T + + ++ E +
Sbjct: 55 VQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEK 114
Query: 284 GSDVIIMLVGNKTDLSDKRQ---VSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 339
S V +++ NK DL ++ ++ SA G V+ V
Sbjct: 115 LSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVC 173
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 63.5 bits (153), Expect = 7e-13
Identities = 33/222 (14%), Positives = 60/222 (27%), Gaps = 71/222 (31%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R+ +L+ LG + GKT+++ +F + D TI
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFNGEDVD----------------------------TISP 32
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
LE R +L +WD GQ+ RS +Y + + V D + +
Sbjct: 33 TLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRE- 91
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+ ER + +++ NK
Sbjct: 92 ---------------------------------------LQSLLVEERLAGATLLIFANK 112
Query: 192 TDLSDKRQVST---EEGERKAKELNVMFIETSAKAGYNVKQV 230
DL + + + SA G ++
Sbjct: 113 QDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPG 154
Score = 54.7 bits (130), Expect = 1e-09
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV-RTER 283
+ +L +WD GQ+ RS +Y + + V D + + + + ER
Sbjct: 41 LEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEER 100
Query: 284 GSDVIIMLVGNKTDLSDKRQVST---EEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 340
+ +++ NK DL + + + SA G ++ +
Sbjct: 101 LAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLD 160
Query: 341 AL 342
+
Sbjct: 161 DI 162
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 63.6 bits (153), Expect = 8e-13
Identities = 45/217 (20%), Positives = 74/217 (34%), Gaps = 65/217 (29%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDF 73
+K++ LG VGK++L F
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGVEDGPEA-------------------------EAAGHT 36
Query: 74 LSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD 133
+++ ++ L ++D Q+ R L + V+VY +T+ SF + S+
Sbjct: 37 YDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASEL--- 93
Query: 134 VRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 193
+ R + DV I+LVGNK+D
Sbjct: 94 -------------------------------------RVQLRRARQTDDVPIILVGNKSD 116
Query: 194 LSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
L R+VS +EG A + FIETSA +NV+ +
Sbjct: 117 LVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQAL 153
Score = 54.0 bits (128), Expect = 2e-09
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 269 FHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAG 328
+ + R + DV I+LVGNK+DL R+VS +EG A + FIETSA
Sbjct: 88 EKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALH 147
Query: 329 YNVKQLFRRVAAAL 342
+NV+ LF V +
Sbjct: 148 HNVQALFEGVVRQI 161
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 63.2 bits (152), Expect = 1e-12
Identities = 28/216 (12%), Positives = 57/216 (26%), Gaps = 58/216 (26%)
Query: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFL 74
KL+FLG + GKT+L+ D AT+ +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRL----------------------------ATLQPTWH 33
Query: 75 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDV 134
+ L ++ +D G + R L Y + V + D + F + +D +
Sbjct: 34 PTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDAL 93
Query: 135 RTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 194
+ ++ + ++R+ G
Sbjct: 94 FNIAELKDVPFVI------------LGNKIDAPNAVSEAELRSALG-------------- 127
Query: 195 SDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
++T +R + V S +
Sbjct: 128 ----LLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEA 159
Score = 51.2 bits (121), Expect = 2e-08
Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 11/126 (8%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
+ ++ +D G + R L Y + V + D + F + +D +
Sbjct: 39 LAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAE 98
Query: 285 S-DVIIMLVGNKTDLSDKRQVS----------TEEGERKAKELNVMFIETSAKAGYNVKQ 333
DV +++GNK D + + T +R + V S +
Sbjct: 99 LKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLE 158
Query: 334 LFRRVA 339
F+ ++
Sbjct: 159 AFQWLS 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 61.9 bits (149), Expect = 4e-12
Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 71/227 (31%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
+ + +L LG+ GK+SLI RF+ S+
Sbjct: 3 IPELRLGVLGDARSGKSSLIHRFLTGSYQVLE-------------------------KTE 37
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
+ K M ++ +T + + + A
Sbjct: 38 SEQYKKEMLVDGQTHLVLIREEA------------------------------------G 61
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
D + +D +I + F+ + + + + +R E + + LVG
Sbjct: 62 APDAKFSGWADAVIFV-------FSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGT 114
Query: 191 KTDLSDK--RQVSTEEGERKAKEL-NVMFIETSAKAGYNVKQVRLQL 234
+ +S R V ++ + ET A G NV +V ++
Sbjct: 115 QDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEV 161
Score = 47.7 bits (112), Expect = 3e-07
Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 267 NSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDK--RQVSTEEGERKAKEL-NVMFIET 323
+ + + +R E + + LVG + +S R V ++ + ET
Sbjct: 87 QAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYET 146
Query: 324 SAKAGYNVKQLFRRVAAAL 342
A G NV ++F+ VA +
Sbjct: 147 CATYGLNVDRVFQEVAQKV 165
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 61.5 bits (148), Expect = 8e-12
Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 37/221 (16%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R+ KL+ LG GK++ I + T GI
Sbjct: 1 RELKLLLLGTGESGKSTFIKQMRIIHGS-------------------------GVPTTGI 35
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ ++ D GQ R + T + + ++ + S
Sbjct: 36 IEYPFDLQSVIF----RMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDN- 90
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
E + L +I T + ++ + + D G +
Sbjct: 91 -----ENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQ 145
Query: 192 TDLSDKRQVSTEEGER--KAKELNVMFIETSAKAGYNVKQV 230
D R+ + + + T A N++ V
Sbjct: 146 RDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFV 186
Score = 37.2 bits (85), Expect = 0.002
Identities = 17/152 (11%), Positives = 45/152 (29%), Gaps = 37/152 (24%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK---------- 274
++++ V ++ D GQ R + T + + ++ + S
Sbjct: 40 FDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKA 99
Query: 275 -WIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGE----------------------- 310
+ + + ++L NK DL +++ + + +
Sbjct: 100 LFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMF 159
Query: 311 ---RKAKELNVMFIETSAKAGYNVKQLFRRVA 339
+ + T A N++ +F V
Sbjct: 160 VDLNPDSDKIIYSHFTCATDTENIRFVFAAVK 191
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 61.5 bits (148), Expect = 9e-12
Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 39/222 (17%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R K++ LG GK++ + + + T GI
Sbjct: 1 RLVKILLLGAGESGKSTFLKQM--------------------------RIIHGQDPTKGI 34
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
E + V ++ D GQ R T + + + + +
Sbjct: 35 HEYD----FEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQT 90
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+ R ++ +V + + + ++T + V+ D + G+
Sbjct: 91 N--RLTESLNIFETIVNNRVFSNVSIIL----FLNKTDLLEEKVQVVSIKDYFLEFEGDP 144
Query: 192 TDLSDKRQVSTEEGERKAK---ELNVMFIETSAKAGYNVKQV 230
L D ++ E K + + + T+A N++ V
Sbjct: 145 HCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLV 186
Score = 36.4 bits (83), Expect = 0.002
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 38/151 (25%)
Query: 226 NVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDD------- 278
+K V ++ D GQ R T + + + + + +
Sbjct: 40 EIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNI 99
Query: 279 ----VRTERGSDVIIMLVGNKTDLSDKRQVSTEEGE------------------------ 310
V S+V I+L NKTDL +++ +
Sbjct: 100 FETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFR 159
Query: 311 ---RKAKELNVMFIETSAKAGYNVKQLFRRV 338
R ++ + T+A N++ +FR V
Sbjct: 160 GKRRDQQQRPLYHHFTTAINTENIRLVFRDV 190
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 57.4 bits (137), Expect = 2e-10
Identities = 24/219 (10%), Positives = 53/219 (24%), Gaps = 53/219 (24%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
+ KLVFLG + GKT+L+ D
Sbjct: 12 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHP------------------------ 47
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ L + +D G + R + +Y+ V + D + ++ + +
Sbjct: 48 ----TSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEEL 103
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
D + T+ + +L+ D + +
Sbjct: 104 DSLMTDETIANVPILILG---------------------NKIDRPEAISEERLR----EM 138
Query: 192 TDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
L + ++ + S +
Sbjct: 139 FGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEG 177
Score = 47.8 bits (112), Expect = 3e-07
Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 16/124 (12%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTER-GSDVIIMLVG 293
+D G + R + +Y+ V + D + ++ + +D + T+ ++V I+++G
Sbjct: 62 FDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILG 121
Query: 294 NKTDLSDKRQVS---------------TEEGERKAKELNVMFIETSAKAGYNVKQLFRRV 338
NK D + ++ + S + FR +
Sbjct: 122 NKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWM 181
Query: 339 AAAL 342
A +
Sbjct: 182 AQYI 185
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 55.8 bits (133), Expect = 4e-10
Identities = 29/191 (15%), Positives = 59/191 (30%), Gaps = 47/191 (24%)
Query: 47 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 106
GKT+ + F+ T+G + + V ++LWD GQ RFRS+ Y
Sbjct: 13 SGKTTFVNVIASGQFNEDMIPTVGFNM----RKITKGNVTIKLWDIGGQPRFRSMWERYC 68
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
R + V + D + +
Sbjct: 69 RGVSAIVYMVDAADQEKIEASKNE------------------------------------ 92
Query: 167 QTSKWIDDVRTERGSDVIIMLVGNKTDLSD---KRQVSTEEGERKAKELNVMFIETSAKA 223
+ + + + ++++GNK DL ++++ + ++ + S K
Sbjct: 93 ----LHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKE 148
Query: 224 GYNVKQVRLQL 234
N+ L
Sbjct: 149 KDNIDITLQWL 159
Score = 51.2 bits (121), Expect = 2e-08
Identities = 22/115 (19%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 229 QVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDV 287
V ++LWD GQ RFRS+ Y R + V + D + + + ++ + + +
Sbjct: 46 NVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGI 105
Query: 288 IIMLVGNKTDLSD---KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 339
++++GNK DL ++++ + ++ + S K N+ + +
Sbjct: 106 PVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 160
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 55.9 bits (133), Expect = 5e-10
Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 63/224 (28%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFD-NTYQATIG 70
+++V +GEQ VGK++L F ++ +G
Sbjct: 2 TYYRVVLIGEQGVGKSTL-----------------------ANIFAGVHDSMDSDCEVLG 38
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
D +T+ ++ + + L D + + + A
Sbjct: 39 EDTYERTLMVDGESATIILLDMWENKGENEWLHDHCMQVGDAY----------------- 81
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ A+ + I R + D+ I+LVGN
Sbjct: 82 ----------------------LIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 119
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQL 234
K+DL R+VS EG A + FIETSA +NVK++ +
Sbjct: 120 KSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGI 163
Score = 53.6 bits (127), Expect = 2e-09
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 267 NSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAK 326
+ + I R + D+ I+LVGNK+DL R+VS EG A + FIETSA
Sbjct: 92 SFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAA 151
Query: 327 AGYNVKQLFRRVAAAL 342
+NVK+LF + +
Sbjct: 152 VQHNVKELFEGIVRQV 167
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 54.4 bits (130), Expect = 3e-09
Identities = 23/234 (9%), Positives = 53/234 (22%), Gaps = 50/234 (21%)
Query: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGID 72
+L+ LG GK++++ + T GI
Sbjct: 6 THRLLLLGAGESGKSTIVKQM---------------------------RILHVVLTSGIF 38
Query: 73 FLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI- 131
+ V ++D GQ R D T + V ++ N +
Sbjct: 39 ETK----FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTN 94
Query: 132 ----------DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGS 181
+ ++L + + + + +
Sbjct: 95 RLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV---LAGKSKIEDYFPEFARYTTP 151
Query: 182 DVIIMLVGNKTDLSD-----KRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
+ G ++ + + T A N+++V
Sbjct: 152 EDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRV 205
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 53.2 bits (126), Expect = 4e-09
Identities = 28/222 (12%), Positives = 56/222 (25%), Gaps = 71/222 (31%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R+ +++ LG GKT+++ R T
Sbjct: 4 REMRILILGLDGAGKTTILYRLQVGEVVTTIP---------------------------- 35
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ + ++ Q+WD G R Y ++ + V D + + +
Sbjct: 36 TIGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSE- 94
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNK 191
+ + E I+++ NK
Sbjct: 95 ---------------------------------------LVAMLEEEELRKAILVVFANK 115
Query: 192 TDLSDKRQVS---TEEGERKAKELNVMFIETSAKAGYNVKQV 230
D+ S G K+ +TSA G + +
Sbjct: 116 QDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEA 157
Score = 52.0 bits (123), Expect = 1e-08
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 4/122 (3%)
Query: 225 YNVKQVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG 284
K ++ Q+WD G R Y ++ + V D + + + + + E
Sbjct: 44 VTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEE 103
Query: 285 SDVI-IMLVGNKTDLSDKRQVS---TEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAA 340
+++ NK D+ S G K+ +TSA G + + +
Sbjct: 104 LRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVE 163
Query: 341 AL 342
L
Sbjct: 164 TL 165
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 51.1 bits (121), Expect = 3e-08
Identities = 26/232 (11%), Positives = 59/232 (25%), Gaps = 62/232 (26%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
R+ KL+ LG GK++++ + GI
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMKIIHEA----------------------------GTGI 32
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK-- 129
+ + + +++D GQ R T + +++ + +
Sbjct: 33 ----VETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEM 88
Query: 130 ---------WIDDVRTERGSDVIIMLVGSIETNFTH--LSFHHANSFHQTSKWIDDVRTE 178
+ + +D I+L + + F + + + E
Sbjct: 89 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTY---E 145
Query: 179 RGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQV 230
+ I + D + + T A NV+ V
Sbjct: 146 EAAAYIQCQFEDLNKRKDTK--------------EIYTHFTCATDTKNVQFV 183
Score = 37.2 bits (85), Expect = 0.001
Identities = 21/142 (14%), Positives = 39/142 (27%), Gaps = 37/142 (26%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK-----------WIDDVRTER 283
+D GQ R T + +++ + + + +
Sbjct: 47 FDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKW 106
Query: 284 GSDVIIMLVGNKTDLSDKRQVSTEEG------------ERKAKELNVMFI---------- 321
+D I+L NK DL +++ + E A + F
Sbjct: 107 FTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKE 166
Query: 322 ----ETSAKAGYNVKQLFRRVA 339
T A NV+ +F V
Sbjct: 167 IYTHFTCATDTKNVQFVFDAVT 188
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 40.0 bits (92), Expect = 2e-04
Identities = 28/218 (12%), Positives = 59/218 (27%), Gaps = 32/218 (14%)
Query: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFL 74
++F+G GKT L R + + +T +I
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ------------------------TSITDSSA 37
Query: 75 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSK----W 130
+ + + L+ + + V V D +
Sbjct: 38 IYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQ 97
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ + +++ + + S Q K ++ +R R + + +
Sbjct: 98 VLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQ--QLEKELNTLRVTRSAAPSTLDSSS 155
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVK 228
++ +E E L V F+E SAK G
Sbjct: 156 TAPAQLGKKG--KEFEFSQLPLKVEFLECSAKGGRGDT 191
Score = 26.5 bits (57), Expect = 4.5
Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Query: 235 WDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW----IDDVRTERGSDVIIM 290
+ L+ + + V V D + + + ++
Sbjct: 53 DLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLL 112
Query: 291 LVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAK 326
+ NK D++ + ++ KELN + + SA
Sbjct: 113 IACNKQDIAMAKSAK-LIQQQLEKELNTLRVTRSAA 147
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 37.3 bits (85), Expect = 0.001
Identities = 31/226 (13%), Positives = 65/226 (28%), Gaps = 44/226 (19%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
+ ++ G Q+ GKTSL+T DS T +
Sbjct: 2 YQPSIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQE------------------------- 36
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVA-----VVVYDITNANSFHQ 126
+ + L D G + R + Y++ +V +
Sbjct: 37 ----PLSAADYDGSGVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTT 92
Query: 127 TSKWIDDVRTE----RGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSD 182
T++++ D+ + + + I++ + FT I V R
Sbjct: 93 TAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKD--ALESEIQKVIERRKKS 150
Query: 183 VIIMLVGNKTDLSDKRQV----STEEGERKAKELNVMFIETSAKAG 224
+ + + + + ST+ + E +V+ E S
Sbjct: 151 LNEVERKINEEDYAENTLDVLQSTDGFKFANLEASVVAFEGSINKR 196
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 34.9 bits (79), Expect = 0.007
Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 7/118 (5%)
Query: 231 RLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIM 290
R+ D G E + + S A++V QT + + ++
Sbjct: 87 RISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGIIG--VKNLI 144
Query: 291 LVGNKTDLSDKRQVSTEEGERK--AKEL---NVMFIETSAKAGYNVKQLFRRVAAALP 343
+V NK D+ K + ++ + K K NV I SA N+ L + +
Sbjct: 145 IVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLIEGIEEYIK 202
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 34.3 bits (77), Expect = 0.013
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 283 RGSDVIIMLVGNKTDLSDKRQVS----TEEGERKAKELNVMFIETSAKAGYNVKQLFRRV 338
R D+ ++ NK D Q E+ E E++ +FI SAK G N+++L R+
Sbjct: 118 RELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRI 177
Query: 339 AAALP 343
+
Sbjct: 178 FEVIR 182
Score = 33.9 bits (76), Expect = 0.017
Identities = 34/224 (15%), Positives = 69/224 (30%), Gaps = 52/224 (23%)
Query: 17 VFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFLSK 76
+F G +VGK++LI R T + GK +TR + + ++
Sbjct: 4 IFAGRSNVGKSTLIYRL-------TGKKVRRGKRPGVTRKIIEIEWKNHKI--------- 47
Query: 77 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRT 136
D G +
Sbjct: 48 -------------IDMPGFGFMM----------------GLPKEVQERIKDEIVHFIEDN 78
Query: 137 ERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSD 196
+ DV +++V + ++ + R D+ ++ NK D
Sbjct: 79 AKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFL---RELDIPTIVAVNKLDKIK 135
Query: 197 KRQVS----TEEGERKAKELNVMFIETSAKAGYNVKQVRLQLWD 236
Q E+ E E++ +FI SAK G N+++++ ++++
Sbjct: 136 NVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFE 179
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 32.6 bits (73), Expect = 0.047
Identities = 21/169 (12%), Positives = 51/169 (30%), Gaps = 5/169 (2%)
Query: 187 LVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVRLQLWDTAGQERFRSL 246
+ K ++D + + + + G + G + R +
Sbjct: 21 VSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGV---GLGHQFLRHI 77
Query: 247 IPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVST 306
+ + + + + + + T R ++ ++V NK D+ + +
Sbjct: 78 ERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDMPEAAENLE 137
Query: 307 EEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKPPED 355
E+ + V I SA +++L VA L E+
Sbjct: 138 AFKEKLTDDYPVFPI--SAVTREGLRELLFEVANQLENTPEFPLYDEEE 184
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 32.0 bits (71), Expect = 0.058
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Query: 261 YDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMF 320
+ + + + + V I+LVGNK D + + + + E
Sbjct: 90 WVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRM 149
Query: 321 IETSAKAGYNVKQLFRRVAAALP 343
+ SA V +L + A +P
Sbjct: 150 L--SALDERQVAELKADLLALMP 170
Score = 26.6 bits (57), Expect = 4.0
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 17 VFLGEQSVGKTSLITRFM 34
+G+ +VGK++L+ +
Sbjct: 9 AIVGKPNVGKSTLLNNLL 26
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 31.6 bits (70), Expect = 0.082
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 14 FKLVFLGEQSVGKTSLITRFM 34
K+V G + GK+SL+
Sbjct: 2 MKVVIAGRPNAGKSSLLNALA 22
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.8 bits (68), Expect = 0.17
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 289 IMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
I+ V ++ +K + ++ + + SA+ G NV + V LP
Sbjct: 117 ILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLP 171
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae
pv. tomato [TaxId: 323]}
Length = 222
Score = 31.0 bits (69), Expect = 0.19
Identities = 33/189 (17%), Positives = 52/189 (27%), Gaps = 22/189 (11%)
Query: 48 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 107
GK++LI R ++DS I SK V L L Q I +
Sbjct: 21 GKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAEREQGITIDVA 80
Query: 108 DSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQ 167
+ D E M G+ + +
Sbjct: 81 YRYFSTAKRKFI----------IADTPGHE--QYTRNMATGASTCDLAIILVDARYGVQT 128
Query: 168 TSKWIDDVRTERGSDVIIMLVGNKTDLSD---------KRQVSTEEGERKAKELNVMFIE 218
++ + + G I++ + NK DL+ K K + F+
Sbjct: 129 QTRRHSYIASLLGIKHIVVAI-NKMDLNGFDERVFESIKADYLKFAEGIAFKPTTMAFVP 187
Query: 219 TSAKAGYNV 227
SA G NV
Sbjct: 188 MSALKGDNV 196
Score = 29.8 bits (66), Expect = 0.34
Identities = 19/109 (17%), Positives = 35/109 (32%), Gaps = 8/109 (7%)
Query: 25 GKTSLITRFMYDS--------FDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFLSK 76
GK++LI R ++DS T + G T + GI
Sbjct: 21 GKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAEREQGITIDVA 80
Query: 77 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFH 125
Y + + DT G E++ + + +A+++ D
Sbjct: 81 YRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQTQ 129
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal
(G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 30.4 bits (67), Expect = 0.22
Identities = 37/221 (16%), Positives = 63/221 (28%), Gaps = 14/221 (6%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIG 70
+R + LG GKT+L+ A + IT+ + +
Sbjct: 3 IRSPIVSVLGHVDHGKTTLLDHI-------RGSAVASREAGGITQHIGATEIPMDVIEGI 55
Query: 71 IDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
K + + L DT G E F +L + +A+++ DI
Sbjct: 56 CGDFLKKFSIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEAL 115
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
V + I H F +T D ++ + LVG
Sbjct: 116 NILRMYRTPFVVAANKIDRIHGWRV----HEGRPFMETFSKQDIQVQQKLDTKVYELVG- 170
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVR 231
L ++ S V I SA G + ++
Sbjct: 171 --KLHEEGFESERFDRVTDFASQVSIIPISAITGEGIPELL 209
>d1jx6a_ c.93.1.1 (A:) Quorum-sensing signal (autoinducer-2) binding
protein LuxP {Vibrio harveyi [TaxId: 669]}
Length = 338
Score = 30.3 bits (67), Expect = 0.32
Identities = 6/54 (11%), Positives = 19/54 (35%)
Query: 252 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVS 305
R ++VV ++ + + + + + + V + + K+Q
Sbjct: 39 RPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSL 92
Score = 26.1 bits (56), Expect = 7.2
Identities = 4/43 (9%), Positives = 15/43 (34%)
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGS 149
R ++VV ++ + + + + + + V +
Sbjct: 39 RPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFT 81
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 29.2 bits (64), Expect = 0.41
Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 15/116 (12%)
Query: 15 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFL 74
++V +G+ +VGK++L+ R ++ + I + + + I I
Sbjct: 2 RMVIVGKPNVGKSTLLNR-------------LLNEDRAIVTDIPGTTRDVISEEIVIRG- 47
Query: 75 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKW 130
++ VR + D + + I + + + V D ++
Sbjct: 48 ILFRIVDTAGVRSETNDLVERLGIERTL-QEIEKADIVLFVLDASSPLDEEDRKIL 102
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 29.3 bits (64), Expect = 0.51
Identities = 17/164 (10%), Positives = 46/164 (28%), Gaps = 13/164 (7%)
Query: 12 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGI 71
K+ +G +VGK++L + + +L++ + D
Sbjct: 7 DAIKVAIVGRPNVGKSTLFNAILNK------------ERALVSPIPGTTRDPVDDEVFID 54
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWI 131
+ + ++ ++ + I + V VV+ Q +
Sbjct: 55 GRKYVFVDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADV-VVIVLDATQGITRQDQRMA 113
Query: 132 DDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDV 175
+ + V++ + + F + +ID
Sbjct: 114 GLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYS 157
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 28.6 bits (62), Expect = 0.93
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 10 PLRKFKLVFLGEQSVGKTSLITRFM 34
++ F G + GK+S +
Sbjct: 13 SDTGIEVAFAGRSNAGKSSALNTLT 37
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 251
Score = 28.5 bits (62), Expect = 1.00
Identities = 23/190 (12%), Positives = 46/190 (24%), Gaps = 9/190 (4%)
Query: 20 GEQSVGKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMY 79
GE GK+ L GK I +F +I F
Sbjct: 41 GEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYID--TEGTFRPVRLVSIAQRFGLDPDD 98
Query: 80 LEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYD-ITNANSFHQTSKWIDDVRTER 138
+ + ++ Q R + +S +++V D + + + R
Sbjct: 99 ALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELSARQMH 158
Query: 139 GSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 198
+ + L + + +Q +D S R
Sbjct: 159 LAKFMRALQRLADQFGVAVVVT-----NQVVAQVDGGMAFNPDPKKPTGGNIMAHSSTTR 213
Query: 199 -QVSTEEGER 207
+G +
Sbjct: 214 LGFKKGKGCQ 223
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 28.6 bits (63), Expect = 1.2
Identities = 17/136 (12%), Positives = 33/136 (24%), Gaps = 26/136 (19%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQAT--IVGKTSLITRFMYDSFDNTYQATIGI 71
+ GE GK+S I + A +V T + + + N
Sbjct: 57 LNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPN-------- 108
Query: 72 DFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNA-NSFHQTSKW 130
+ WD G +Y+ + I + F +
Sbjct: 109 ---------------VVFWDLPGIGSTNFPPDTYLEKMKFYEYDFFIIISATRFKKNDID 153
Query: 131 IDDVRTERGSDVIIML 146
I + + +
Sbjct: 154 IAKAISMMKKEFYFVR 169
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 28.0 bits (61), Expect = 1.2
Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 2/172 (1%)
Query: 172 IDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQVR 231
+ V T+ S+ + + K +D R + + + V +
Sbjct: 25 LTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFID 84
Query: 232 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIML 291
+ +A H + I + + I L
Sbjct: 85 APGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIEL 144
Query: 292 VGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
V + L + RQ+ A+ N I SA G N+ L + + +P
Sbjct: 145 VDKEKALENYRQIKEFIEGTVAE--NAPIIPISALHGANIDVLVKAIEDFIP 194
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 28.3 bits (62), Expect = 1.6
Identities = 22/175 (12%), Positives = 51/175 (29%), Gaps = 20/175 (11%)
Query: 47 VGKTSLITRFMYDSFDNTYQ-ATIGIDFLSK---TMYLEDRTVRLQLWDTAGQERFRSLI 102
VGK++ I ++ A + +D S L D+T +L S
Sbjct: 62 VGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPS 121
Query: 103 PSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHA 162
+T + + +++ VG ++
Sbjct: 122 SGT--------------LGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDF 167
Query: 163 NSFHQTSKWIDDVRTERGS--DVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVM 215
D+++ + ++ M+ NK D D + ++ L+++
Sbjct: 168 FLVLMLPGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHIL 222
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal
(G) domain {Archaeon Sulfolobus solfataricus [TaxId:
2287]}
Length = 224
Score = 27.9 bits (61), Expect = 1.6
Identities = 35/217 (16%), Positives = 62/217 (28%), Gaps = 48/217 (22%)
Query: 25 GKTSLITRFMYDS--------FDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFLSK 76
GK++L+ R + D + A +GK S F+ D + + I+
Sbjct: 15 GKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFM 74
Query: 77 TMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDI------TNANSFHQTSKW 130
+ + D G F + + + A++V + QT +
Sbjct: 75 RFETKKYFFTII--DAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTRE- 131
Query: 131 IDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGN 190
+ G D +I+ V N T D+ R +
Sbjct: 132 HIILAKTMGLDQLIVAV---------------NKMDLTEPPYDEKRYKE----------- 165
Query: 191 KTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNV 227
QVS V F+ A +G N+
Sbjct: 166 -----IVDQVSKFMRSYGFNTNKVRFVPVVAPSGDNI 197
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 27.8 bits (60), Expect = 1.8
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 303 QVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALP 343
+ + N I SAK G+ V +L + L
Sbjct: 134 MIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTLN 174
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 27.5 bits (60), Expect = 2.3
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 15 KLVFLGEQSVGKTSLI 30
++V +G QS GK+S++
Sbjct: 26 QIVVVGSQSSGKSSVL 41
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 27.5 bits (60), Expect = 2.3
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 15 KLVFLGEQSVGKTSLI 30
++ +G QS GK+S++
Sbjct: 28 QIAVVGGQSAGKSSVL 43
>d1guda_ c.93.1.1 (A:) D-allose-binding protein {Escherichia coli
[TaxId: 562]}
Length = 288
Score = 27.4 bits (59), Expect = 2.4
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 255 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 304
AVV+ ++N + K I+D G V I ++ D + Q+
Sbjct: 3 EYAVVLKTLSNPF-WVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQL 51
Score = 25.9 bits (55), Expect = 8.9
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 110 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGS 149
AVV+ ++N + K I+D G V I S
Sbjct: 3 EYAVVLKTLSNPF-WVDMKKGIEDEAKTLGVSVDIFASPS 41
>d1kkca1 a.2.11.1 (A:14-97) Mn superoxide dismutase (MnSOD)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 84
Score = 26.1 bits (57), Expect = 2.4
Identities = 6/46 (13%), Positives = 16/46 (34%)
Query: 149 SIETNFTHLSFHHANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDL 194
S + H HH + + ++ + + + LV + +
Sbjct: 20 SQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQAI 65
>d2pw6a1 c.56.6.1 (A:14-271) Uncharacterized protein YgiD
{Escherichia coli [TaxId: 562]}
Length = 258
Score = 27.3 bits (60), Expect = 2.9
Identities = 10/80 (12%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFH 166
D+ + +V I ++ + + R ++++ G++ N + +H +S +
Sbjct: 119 PDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPY 178
Query: 167 QTSK----WIDDVRTERGSD 182
+ ++ T +G
Sbjct: 179 PWATSFNEYVKANLTWQGPV 198
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 26.8 bits (59), Expect = 3.6
Identities = 14/93 (15%), Positives = 25/93 (26%), Gaps = 8/93 (8%)
Query: 25 GKTSLITRFMYDSFDNTYQATIVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT 84
GKT+L Y + A + D I I+ + + E
Sbjct: 15 GKTTLTAALTYVA------AAENPNVEVKDYGDIDKAPEERARGITIN--TAHVEYETAK 66
Query: 85 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYD 117
D G + + + A++V
Sbjct: 67 RHYSHVDCPGHADYIKNMITGAAQMDGAILVVS 99
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator
CcpA, C-terminal domain {Bacillus megaterium [TaxId:
1404]}
Length = 275
Score = 27.0 bits (58), Expect = 3.7
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 252 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 297
+ +TV V++ DI+N + + ++ I+D+ T ++I+ D
Sbjct: 2 KTTTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILSNSDQNQD 46
Score = 25.8 bits (55), Expect = 8.8
Identities = 10/39 (25%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 107 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIM 145
+ +TV V++ DI+N + + ++ I+D+ T ++I+
Sbjct: 2 KTTTVGVIIPDISNI-FYAELARGIEDIATMYKYNIILS 39
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 26.6 bits (57), Expect = 3.9
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 269 FHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAG 328
T + R S V +LV NK + + + + + + SA+
Sbjct: 92 RGITKEDESLADFLRKSTVDTILVANKAENLREFEREVKPELYSLGFGEPIPV--SAEHN 149
Query: 329 YNVKQLFRRVAAALP 343
N+ + + L
Sbjct: 150 INLDTMLETIIKKLE 164
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli,
strain k-12 [TaxId: 562]}
Length = 271
Score = 26.6 bits (57), Expect = 4.8
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 255 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 297
T+A+VV + N F + G +++++ N
Sbjct: 3 TIALVVSTLNNP-FFVSLKDGAQKEADKLGYNLVVLDSQNNPA 44
Score = 25.9 bits (55), Expect = 7.3
Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 110 TVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIM 145
T+A+VV + N F + G +++++
Sbjct: 3 TIALVVSTLNNP-FFVSLKDGAQKEADKLGYNLVVL 37
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella
flexneri [TaxId: 623]}
Length = 247
Score = 26.1 bits (57), Expect = 6.9
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 3/93 (3%)
Query: 121 ANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQTSK-WIDDVRTER 179
+ Q I ++ R + +I+ G N H H ++ W R
Sbjct: 150 KSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYR 209
Query: 180 GSDVIIMLVGNKTDLSDKRQVSTEEGERKAKEL 212
+ + + + S R + + K +
Sbjct: 210 NQGLSMSSDEHADEYS--RYIVDGAAVAEMKGI 240
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 26.0 bits (56), Expect = 7.0
Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 17/194 (8%)
Query: 48 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 107
GK++L ++ + + I+ +K E + L T+ + +
Sbjct: 36 GKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRA 95
Query: 108 DSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGSIETNFTHLSFHHANSFHQ 167
+ + +A + + +D+ ++++ + F Q
Sbjct: 96 YFETEHRRFSLLDAPGHKGYVT--NMINGASQADIGVLVISARRGEFEAGFER----GGQ 149
Query: 168 TSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGERKAKEL-----------NVMF 216
T + RT+ + +++++ + +E K +V +
Sbjct: 150 TREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKY 209
Query: 217 IETSAKAGYNVKQV 230
+ SA G NVK
Sbjct: 210 MPVSAYTGQNVKDR 223
>d2awia1 a.35.1.11 (A:2-66) PrgX {Enterococcus faecalis [TaxId:
1351]}
Length = 65
Score = 24.2 bits (52), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 195 SDKRQVSTEEGERKAKELNVMFIETSAKAG 224
+D R +S EE + ++ L V F E +AG
Sbjct: 36 ADSRPISVEELSKFSERLGVNFFEILNRAG 65
Score = 24.2 bits (52), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 299 SDKRQVSTEEGERKAKELNVMFIETSAKAG 328
+D R +S EE + ++ L V F E +AG
Sbjct: 36 ADSRPISVEELSKFSERLGVNFFEILNRAG 65
>d1eiwa_ c.23.3.1 (A:) Hypothetical protein MTH538 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 24.8 bits (54), Expect = 9.9
Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 170 KWIDDVRTERGSDVIIMLVGNKTDLSD 196
+W T +D +I+L G D
Sbjct: 30 EWRPA--TPEDADAVIVLAGLWGTRRD 54
Score = 24.8 bits (54), Expect = 9.9
Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 274 KWIDDVRTERGSDVIIMLVGNKTDLSD 300
+W T +D +I+L G D
Sbjct: 30 EWRPA--TPEDADAVIVLAGLWGTRRD 54
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.372
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,229,496
Number of extensions: 54299
Number of successful extensions: 465
Number of sequences better than 10.0: 1
Number of HSP's gapped: 362
Number of HSP's successfully gapped: 206
Length of query: 355
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 269
Effective length of database: 1,226,816
Effective search space: 330013504
Effective search space used: 330013504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.8 bits)