BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15726
(171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BTM8|FLNA_MOUSE Filamin-A OS=Mus musculus GN=Flna PE=1 SV=5
Length = 2647
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 39 PMEVPVVD--PAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVP 96
P +VPV D A + SG GL R+ + SF ++T + V V P+G P
Sbjct: 1437 PFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEP 1496
Query: 97 VRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLS 153
V + P+ G Y I VL G V SP+ +V +DASKVK GL+
Sbjct: 1497 VDVVDNADGTQTVNYVPSREGSYSISVLYGEEEVPRSPFKVKVLPTHDASKVKASGPGLN 1556
Query: 154 NIVV 157
V
Sbjct: 1557 TTGV 1560
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 37 SCPMEVPVVDPAVGREPSG---SGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGA 93
S P +VPV + G +PS G G+ + N FT+ET G + + V P A
Sbjct: 1342 SSPFQVPVTE---GCDPSRVRVHGPGIQSGTTNKPNKFTVETRGAGTGGLGLAVEGPSEA 1398
Query: 94 AVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHK 150
+ C K + E+ P G Y ++V G V GSP+ V+ DASKVK
Sbjct: 1399 KM--SCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVPVHDVTDASKVKCSGP 1456
Query: 151 GLSNIVV--NDPISFKCKSTE 169
GLS +V N P SF+ +++
Sbjct: 1457 GLSPGMVRANLPQSFQVDTSK 1477
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL +G FT++T G + + V P A + C + PT
Sbjct: 1074 GPGLQGGNAGSPARFTIDTKGAGTGGLGLTVEGPCEAQL--ECLDNGDGTCSVSYVPTEP 1131
Query: 117 GVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVNDPISFK 164
G Y I++L + GSP+ V +DASKVK GL + F+
Sbjct: 1132 GDYNINILFADTHIPGSPFKAHVAPCFDASKVKCSGPGLERATAGEVGQFQ 1182
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 56 SGLGLYQARSGIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFA-NLLAEFTP 113
SGLG + G FT+++ G + + SP GAAVP + A N + F P
Sbjct: 977 SGLG-DKVDVGKDQEFTVKSKGAGGQGKVASKIVSPSGAAVPCKVEPGLGADNSVVRFVP 1035
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
G Y+++V PV GSP+ + SKVK GL P F
Sbjct: 1036 REEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGGNAGSPARF 1088
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 110 EFTPTTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
E+TP GV+ +DV PV SP+ V D S+V++ G+ + N P F
Sbjct: 1320 EYTPYEEGVHSVDVTYDGSPVPSSPFQVPVTEGCDPSRVRVHGPGIQSGTTNKPNKF 1376
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 56 SGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFT--P 113
SG GL +A +G V F ++ S+E + + S A +P Y Q + T P
Sbjct: 1166 SGPGLERATAGEVGQFQVDCSSAGSAELTIEICSE--AGLPAEVYIQDHGDGTHTITYIP 1223
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQV 139
G Y + + G +PV P QV
Sbjct: 1224 LCPGAYTVTIKYGGQPVPNFPSKLQV 1249
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 8/114 (7%)
Query: 55 GSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLA--EFT 112
G GL R F + T G S E V V P+G R Q+ + + E+
Sbjct: 487 GRGLQPKGVRVKETADFKVYTKGAGSGELKVTVKGPKGEE---RVKQKDLGDGVYGFEYY 543
Query: 113 PTTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
PT G Y + + G + + SP+ +V KV+ GL +V F
Sbjct: 544 PTIPGTYTVTITWGGQNIGRSPFEVKVGTECGNQKVRAWGPGLEGGIVGKSADF 597
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 50 GREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAA--VPVRCYQQKFANL 107
G EP+G+ + + R+ FT+ET E V V P G V K
Sbjct: 290 GIEPTGN---MVKKRA----EFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTF 342
Query: 108 LAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY------DASKVKIEHKGL 152
+ P TG +K+ VL + + SP+ +VY DASKV + GL
Sbjct: 343 SVWYVPEVTGTHKVTVLFAGQHIAKSPF--EVYVDKSQGDASKVTAQGPGL 391
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 10/115 (8%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL G F +E G V P A + C + + + P
Sbjct: 583 GPGLEGGIVGKSADFVVEAIGDDVGTLGFSVEGPSQAKI--ECDDKGDGSCDVRYWPQEA 640
Query: 117 GVYKIDVLQGARPVRGSPYLCQVYDA------SKVKIEHKGL--SNIVVNDPISF 163
G Y + VL + +R SP++ + +A +VK GL + + VN P F
Sbjct: 641 GEYAVHVLCNSEDIRLSPFMADIREAPQDFHPDRVKARGPGLEKTGVAVNKPAEF 695
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 17/105 (16%)
Query: 70 SFTLETCGVASSEFDVIVTSPQGAAVPVRCY-----QQKFANLLAEFTPTTTGVYKIDVL 124
SF + G A D V SP GA CY Q K+A F P G+Y IDV
Sbjct: 2352 SFAVSLNG-AKGAIDAKVHSPSGALE--ECYVTEIDQDKYA---VRFIPRENGIYLIDVK 2405
Query: 125 QGARPVRGSPYLCQV------YDASKVKIEHKGLSNIVVNDPISF 163
+ GSP+ +V D V GL V P F
Sbjct: 2406 FNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGVTGSPAEF 2450
>sp|P21333|FLNA_HUMAN Filamin-A OS=Homo sapiens GN=FLNA PE=1 SV=4
Length = 2647
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 5/124 (4%)
Query: 39 PMEVPVVD--PAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVP 96
P +VPV D A + SG GL R+ + SF ++T + V V P+G P
Sbjct: 1437 PFKVPVHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSKAGVAPLQVKVQGPKGLVEP 1496
Query: 97 VRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLS 153
V + P+ G Y I VL G V SP+ +V +DASKVK GL+
Sbjct: 1497 VDVVDNADGTQTVNYVPSREGPYSISVLYGDEEVPRSPFKVKVLPTHDASKVKASGPGLN 1556
Query: 154 NIVV 157
V
Sbjct: 1557 TTGV 1560
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPSG---SGLGLYQARSGIVNSFTLETCGV 78
GL + + S P +VPV + G +PS G G+ + N FT+ET G
Sbjct: 1327 GLHSVDVTYDGSPVPSSPFQVPVTE---GCDPSRVRVHGPGIQSGTTNKPNKFTVETRGA 1383
Query: 79 ASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQ 138
+ + V P A + C K + E+ P G Y ++V G V GSP+
Sbjct: 1384 GTGGLGLAVEGPSEAKM--SCMDNKDGSCSVEYIPYEAGTYSLNVTYGGHQVPGSPFKVP 1441
Query: 139 VY---DASKVKIEHKGLSNIVV--NDPISFKCKSTE 169
V+ DASKVK GLS +V N P SF+ +++
Sbjct: 1442 VHDVTDASKVKCSGPGLSPGMVRANLPQSFQVDTSK 1477
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL +G FT++T G + + V P A + C + PT
Sbjct: 1074 GPGLQGGSAGSPARFTIDTKGAGTGGLGLTVEGPCEAQL--ECLDNGDGTCSVSYVPTEP 1131
Query: 117 GVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVNDPISFK 164
G Y I++L + GSP+ V +DASKVK GL + F+
Sbjct: 1132 GDYNINILFADTHIPGSPFKAHVVPCFDASKVKCSGPGLERATAGEVGQFQ 1182
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 56 SGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFT--P 113
SG GL +A +G V F ++ S+E + + S A +P Y Q + T P
Sbjct: 1166 SGPGLERATAGEVGQFQVDCSSAGSAELTIEICSE--AGLPAEVYIQDHGDGTHTITYIP 1223
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQV 139
G Y + + G +PV P QV
Sbjct: 1224 LCPGAYTVTIKYGGQPVPNFPSKLQV 1249
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 6/113 (5%)
Query: 56 SGLGLYQARSGIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFA-NLLAEFTP 113
SGLG + G FT+++ G + + P GAAVP + A N + F P
Sbjct: 977 SGLG-EKVDVGKDQEFTVKSKGAGGQGKVASKIVGPSGAAVPCKVEPGLGADNSVVRFLP 1035
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
G Y+++V PV GSP+ + SKVK GL P F
Sbjct: 1036 REEGPYEVEVTYDGVPVPGSPFPLEAVAPTKPSKVKAFGPGLQGGSAGSPARF 1088
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 43/115 (37%), Gaps = 10/115 (8%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL G F +E G V P A + C + + + P
Sbjct: 583 GPGLEGGVVGKSADFVVEAIGDDVGTLGFSVEGPSQAKI--ECDDKGDGSCDVRYWPQEA 640
Query: 117 GVYKIDVLQGARPVRGSPYLCQVYDA------SKVKIEHKGL--SNIVVNDPISF 163
G Y + VL + +R SP++ + DA +VK GL + + VN P F
Sbjct: 641 GEYAVHVLCNSEDIRLSPFMADIRDAPQDFHPDRVKARGPGLEKTGVAVNKPAEF 695
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 87 VTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY---DAS 143
V +P G + E+TP G++ +DV PV SP+ V D S
Sbjct: 1297 VANPSGNLTETYVQDRGDGMYKVEYTPYEEGLHSVDVTYDGSPVPSSPFQVPVTEGCDPS 1356
Query: 144 KVKIEHKGLSNIVVNDPISF 163
+V++ G+ + N P F
Sbjct: 1357 RVRVHGPGIQSGTTNKPNKF 1376
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 50 GREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAA--VPVRCYQQKFANL 107
G EP+G+ + + R+ FT+ET E V V P G V K
Sbjct: 290 GIEPTGN---MVKKRA----EFTVETRSAGQGEVLVYVEDPAGHQEEAKVTANNDKNRTF 342
Query: 108 LAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY------DASKVKIEHKGL 152
+ P TG +K+ VL + + SP+ +VY DASKV + GL
Sbjct: 343 SVWYVPEVTGTHKVTVLFAGQHIAKSPF--EVYVDKSQGDASKVTAQGPGL 391
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Query: 70 SFTLETCGVASSEFDVIVTSPQGAAVPVRCY-----QQKFANLLAEFTPTTTGVYKIDVL 124
SF + G A D V SP GA CY Q K+A F P GVY IDV
Sbjct: 2352 SFAVSLNG-AKGAIDAKVHSPSGALE--ECYVTEIDQDKYA---VRFIPRENGVYLIDVK 2405
Query: 125 QGARPVRGSPYLCQV------YDASKVKIEHKGLSNIVVNDPISF 163
+ GSP+ +V D V GL V +P F
Sbjct: 2406 FNGTHIPGSPFKIRVGEPGHGGDPGLVSAYGAGLEGGVTGNPAEF 2450
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 50 GREPSGSGLGLYQARSGIVNS---FTLETCGVASSEFDVIVTSPQG--AAVPVRCYQQKF 104
G EPSG+ I N F + T G + E +V++ P G V + +
Sbjct: 390 GLEPSGN----------IANKTTYFEIFTAGAGTGEVEVVIQDPMGQKGTVEPQLEARGD 439
Query: 105 ANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVYDA 142
+ + PT GV+ + V P+ SPY V A
Sbjct: 440 STYRCSYQPTMEGVHTVHVTFAGVPIPRSPYTVTVGQA 477
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 87 VTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDAS 143
V P A + + ++TP G Y I VL + SP +V +DAS
Sbjct: 814 VVGPAEADIDFDIIRNDNDTFTVKYTPRGAGSYTIMVLFADQATPTSPIRVKVEPSHDAS 873
Query: 144 KVKIEHKGLSNIVV 157
KVK E GLS V
Sbjct: 874 KVKAEGPGLSRTGV 887
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTP 113
SG GL + + FT++ V +T P+G + P
Sbjct: 1551 SGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPKKTHIQDNHDGTYTVAYVP 1610
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKI 147
TG Y I + G + SPY + DASK +
Sbjct: 1611 DVTGRYTILIKYGGDEIPFSPYRVRAVPTGDASKCTV 1647
>sp|O75369|FLNB_HUMAN Filamin-B OS=Homo sapiens GN=FLNB PE=1 SV=2
Length = 2602
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 66 GIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFA---NLLAEFTPTTTGVYKI 121
G FT++T G + DV + SP VP C N A+F P G+Y +
Sbjct: 959 GKDQEFTVDTRGAGGQGKLDVTILSPSRKVVP--CLVTPVTGRENSTAKFIPREEGLYAV 1016
Query: 122 DVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
DV PV GSPY + D SKVK GL +V P F
Sbjct: 1017 DVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGLVGKPAEF 1061
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 39 PMEVPV---VDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAV 95
P VPV VDP+ + +G GLG R+ ++ SFT+++ + +V V P+G
Sbjct: 1410 PFRVPVKDVVDPSKVKI-AGPGLG-SGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVE 1467
Query: 96 PVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGL 152
PV +TP+ G Y + V + SP+ +V YDASKV GL
Sbjct: 1468 PVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGL 1527
Query: 153 SN 154
S+
Sbjct: 1528 SS 1529
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPS---GSGLGLYQARSGIVNSFTLETCGV 78
GL ++ + P +V V + G +PS G GL +A + N FT+ T G
Sbjct: 1300 GLHVVEVTYDDVPIPNSPFKVAVTE---GCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGA 1356
Query: 79 ASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY--- 135
+ V P + + C K + AE+ P G Y +++ G + GSP+
Sbjct: 1357 GIGGLGITVEGPSESKI--NCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVP 1414
Query: 136 LCQVYDASKVKIEHKGLSNIV 156
+ V D SKVKI GL + V
Sbjct: 1415 VKDVVDPSKVKIAGPGLGSGV 1435
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 71 FTLETCGVASSEFDVIVTSPQG--AAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGAR 128
FT++T + V V P+G V K E+ P TG++K+ VL +
Sbjct: 277 FTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQ 336
Query: 129 PVRGSPYLCQVY----DASKVKIEHKGLSNI--VVNDPISF 163
+ SP+ V DASKV + GL + + N P F
Sbjct: 337 HISKSPFEVSVDKAQGDASKVTAKGPGLEAVGNIANKPTYF 377
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLA--EF 111
SG GL R F ++T S E V + P+G V+ Q+ F + + E+
Sbjct: 458 SGRGLQPKGVRIRETTDFKVDTKAAGSGELGVTMKGPKGLEELVK--QKDFLDGVYAFEY 515
Query: 112 TPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVNDPISFKCKS 167
P+T G Y I + G + SP+ QV KV+ GL +V F +S
Sbjct: 516 YPSTPGRYSIAITWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVES 574
Score = 34.7 bits (78), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTP 113
S G GL + +FT+ T D+ + P A + C K + P
Sbjct: 1825 SAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEI--SCIDNKDGTCTVTYLP 1882
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQVYDASK 144
T G Y I V + + GSP+ ++ D S+
Sbjct: 1883 TLPGDYSILVKYNDKHIPGSPFTAKITDDSR 1913
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 110 EFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVND 159
++ P G Y I VL ++ + SP+ +V +DASKVK E GLS V +
Sbjct: 810 KYVPPAAGRYTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVEN 862
Score = 33.1 bits (74), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 55 GSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSP-QGAAV-PVRCYQQKFANLLAEFT 112
G GL +G FT+ T G + +V SP G AV + + ++T
Sbjct: 852 GPGLSKAGVENGKPTHFTVYTKGAGKAPLNVQFNSPLPGDAVKDLDIIDNYDYSHTVKYT 911
Query: 113 PTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIV 156
PT G ++ V G P+ SP+ V D SK+K+ GL N V
Sbjct: 912 PTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKL--NGLENRV 956
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 70 SFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARP 129
SF + G A + D V SP GA + + F P GV+ IDV
Sbjct: 2307 SFAIRLNG-AKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGVHTIDVKFNGSH 2365
Query: 130 VRGSPYLCQV 139
V GSP+ +V
Sbjct: 2366 VVGSPFKVRV 2375
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 78 VASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLC 137
V + +P GA+ E+TP G++ ++V P+ SP+
Sbjct: 1261 VGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKV 1320
Query: 138 QVYDA---SKVKIEHKGLSNIVVNDPISF 163
V + S+V+ + GL N P F
Sbjct: 1321 AVTEGCQPSRVQAQGPGLKEAFTNKPNVF 1349
>sp|Q8VHX6|FLNC_MOUSE Filamin-C OS=Mus musculus GN=Flnc PE=1 SV=3
Length = 2726
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 39 PMEVPV---VDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAV 95
P VPV VDP + SG GLG R+ + +FT++ + V V P G A
Sbjct: 1433 PFRVPVKDVVDPGKVKC-SGPGLGT-GVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAE 1490
Query: 96 PVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGL 152
PV +TP T G Y + V + V SP+ +V +DASKV+ GL
Sbjct: 1491 PVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPSHDASKVRASGPGL 1550
Query: 153 --SNIVVNDPISFKCKSTE 169
S I + P+ F + +
Sbjct: 1551 NASGIPASLPVEFTIDARD 1569
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTP 113
SG GL R V F + T G S E V V P+G PV+ + E+ P
Sbjct: 481 SGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYP 540
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVNDPISF 163
G Y + + G + SP+ QV A KV+ GL V F
Sbjct: 541 VVPGKYVVTITWGGYAIPRSPFEVQVSPEAGAQKVRAWGPGLETGQVGKSADF 593
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASS 81
G+ L +E + P V V + G GL N FT+ET G +
Sbjct: 1323 GVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVETRGAGTG 1382
Query: 82 EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY---LCQ 138
+ + P A + C K + E+ P T G Y +++ G +P+ GSP+ +
Sbjct: 1383 GLGLAIEGPSEAKM--SCKDNKDGSCTVEYIPFTPGDYDVNITFGGQPIPGSPFRVPVKD 1440
Query: 139 VYDASKVKIEHKGLSNIV 156
V D KVK GL V
Sbjct: 1441 VVDPGKVKCSGPGLGTGV 1458
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 66 GIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFANLLA-EFTPTTTGVYKIDV 123
G +F++ T G + DV +TSP +P + A A + P G YK+D+
Sbjct: 982 GQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDI 1041
Query: 124 LQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
PV GSP+ + D SKV GL +V P F
Sbjct: 1042 TYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGLVGTPAPF 1084
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 43 PVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQ 102
PV DP+ R SG GL + ++G +FT++ +E + + S G V
Sbjct: 1152 PVFDPSKVR---ASGPGLERGKAGEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIQNN 1208
Query: 103 KFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGL 152
++P G Y I + G P+ P V D S +K+ G+
Sbjct: 1209 ADGTYHITYSPAFPGTYTITIKYGGHPIPKFPTRVHVQPAVDTSGIKVSGPGV 1261
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 87 VTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDAS 143
V P A + + ++TP G Y I VL + + SP+ +V +DAS
Sbjct: 810 VVGPVEADIDFDIIKNDNDTFTVKYTPPGAGHYTIMVLFANQEIPASPFHIKVDPSHDAS 869
Query: 144 KVKIEHKGLS--NIVVNDPISF 163
KVK E GLS + V P F
Sbjct: 870 KVKAEGPGLSRTGVEVGKPTHF 891
Score = 33.1 bits (74), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 39 PMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVR 98
P EV V A ++ G GL + G F +E G + P A +
Sbjct: 561 PFEVQVSPEAGAQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKI--E 618
Query: 99 CYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVYDA------SKVKIEHKGL 152
C + + + PT G Y + V+ +R SP++ + A KVK GL
Sbjct: 619 CDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHIQPAPPDCFPDKVKAFGPGL 678
Query: 153 --SNIVVNDPISF 163
+ +V+ P F
Sbjct: 679 EPTGCIVDRPAEF 691
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 11/129 (8%)
Query: 37 SCPMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVP 96
+CP +P V EP S L + +V FT++ E V P G
Sbjct: 1762 TCPTHWATEEPVVPVEPLESMLRPFN----LVIPFTVQ-----KGELTGEVRMPSGKTAR 1812
Query: 97 VRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSP--YLCQVYDASKVKIEHKGLSN 154
K + + PT G++++ + + GSP + ++ V GLS+
Sbjct: 1813 PNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHVSAYGPGLSH 1872
Query: 155 IVVNDPISF 163
+VN P +F
Sbjct: 1873 GMVNKPATF 1881
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 81 SEFDVIVTSPQGAAVPVRCYQQKFAN--LLAEFTPTTTGVYKIDVLQGARPVRGSPYL-- 136
S+ + +P G P C ++ N + FTP G + + V + + V SP+
Sbjct: 1976 SQLTASIRAPSGNEEP--CLLKRLPNRHIGISFTPKEVGEHVVSVRKSGKHVTNSPFKIL 2033
Query: 137 ---CQVYDASKVKIEHKGLS 153
++ DASKV++ KGLS
Sbjct: 2034 VGPSEIGDASKVRVWGKGLS 2053
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL G F+++T G + + V P A + C + + PT
Sbjct: 1070 GPGLKGGLVGTPAPFSIDTKGAGTGGLGLTVEGPCEAKI--ECQDNGDGSCAVSYLPTEP 1127
Query: 117 GVYKIDVLQGARPVRGSPY---LCQVYDASKVKIEHKGLSNIVVNDPISFKCKSTE 169
G Y I++L + GSP+ + V+D SKV+ GL + +F +E
Sbjct: 1128 GEYTINILFAEAHIPGSPFKATIQPVFDPSKVRASGPGLERGKAGEAATFTVDCSE 1183
Score = 30.8 bits (68), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL + ++ V F ++T + + P + V + C + + PT
Sbjct: 2049 GKGLSEGQTFQVAEFIVDTRNAGYGGLGLSIEGP--SKVDINCEDMEDGTCKVTYCPTEP 2106
Query: 117 GVYKIDVLQGARPVRGSPYLCQVYDASKVK 146
G Y I++ + V GSP+ +V ++K
Sbjct: 2107 GTYIINIKFADKHVPGSPFTVKVTGEGRMK 2136
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASS 81
GL Q + P++ VD R S G GL +FT+ T
Sbjct: 1833 GLHQMGIKYDGNHIPGSPLQF-YVDAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEG 1891
Query: 82 EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV 139
+ V P A + C K + PT G Y I V + + GSP+ ++
Sbjct: 1892 GLSLAVEGPSKAEI--TCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 1947
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 60 LYQARSGIVNSFTLETCGVASS-EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGV 118
L + R G S T + G ASS + VTSP G + + + F P G
Sbjct: 2227 LGRERLGSFGSITRQQEGEASSQDMTAQVTSPSGKTEAAEIVEGEDSAYSVRFVPQEMGP 2286
Query: 119 YKIDVLQGARPVRGSPYLCQV-----YDASKVKIEHKGLSNIVVNDPISFKCKSTE 169
+ + V + V GSP+ V A KV+ GL V P F + E
Sbjct: 2287 HTVTVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTRE 2342
>sp|Q14315|FLNC_HUMAN Filamin-C OS=Homo sapiens GN=FLNC PE=1 SV=3
Length = 2725
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 39 PMEVPV---VDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAV 95
P VPV VDP + SG GLG R+ + +FT++ + V V P G A
Sbjct: 1432 PFRVPVKDVVDPGKVKC-SGPGLGA-GVRARVPQTFTVDCSQAGRAPLQVAVLGPTGVAE 1489
Query: 96 PVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGL 152
PV +TP T G Y + V + V SP+ +V +DASKV+ GL
Sbjct: 1490 PVEVRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKIKVLPAHDASKVRASGPGL 1549
Query: 153 --SNIVVNDPISFKCKSTE 169
S I + P+ F + +
Sbjct: 1550 NASGIPASLPVEFTIDARD 1568
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 5/135 (3%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASS 81
G+ L +E + P V V + G GL N FT+ET G +
Sbjct: 1322 GVHLVEVLYDEVAVPKSPFRVGVTEGCDPTRVRAFGPGLEGGLVNKANRFTVETRGAGTG 1381
Query: 82 EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY---LCQ 138
+ + P A + C K + E+ P T G Y +++ G RP+ GSP+ +
Sbjct: 1382 GLGLAIEGPSEAKM--SCKDNKDGSCTVEYIPFTPGDYDVNITFGGRPIPGSPFRVPVKD 1439
Query: 139 VYDASKVKIEHKGLS 153
V D KVK GL
Sbjct: 1440 VVDPGKVKCSGPGLG 1454
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTP 113
SG GL R V F + T G S E V V P+G PV+ + E+ P
Sbjct: 480 SGRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPVKVREAGDGVFECEYYP 539
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQV 139
G Y + + G + SP+ QV
Sbjct: 540 VVPGKYVVTITWGGYAIPRSPFEVQV 565
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 66 GIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFANLLA-EFTPTTTGVYKIDV 123
G +F++ T G + DV +TSP +P + A A + P G YK+D+
Sbjct: 981 GQEQAFSVNTRGAGGQGQLDVRMTSPSRRPIPCKLEPGGGAEAQAVRYMPPEEGPYKVDI 1040
Query: 124 LQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
PV GSP+ + D SKV GL +V P F
Sbjct: 1041 TYDGHPVPGSPFAVEGVLPPDPSKVCAYGPGLKGGLVGTPAPF 1083
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 43 PVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQ 102
PV DP+ R SG GL + + G +FT++ +E + + S G V +
Sbjct: 1151 PVFDPSKVR---ASGPGLERGKVGEAATFTVDCSEAGEAELTIEILSDAGVKAEVLIHNN 1207
Query: 103 KFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVY---DASKVKIEHKGL 152
++P G Y I + G PV P V D S VK+ G+
Sbjct: 1208 ADGTYHITYSPAFPGTYTITIKYGGHPVPKFPTRVHVQPAVDTSGVKVSGPGV 1260
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 87 VTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDAS 143
V P A + + ++TP G Y I VL + + SP+ +V +DAS
Sbjct: 809 VVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFANQEIPASPFHIKVDPSHDAS 868
Query: 144 KVKIEHKGL--SNIVVNDPISF 163
KVK E GL + + V P F
Sbjct: 869 KVKAEGPGLNRTGVEVGKPTHF 890
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL G F+++T G + + V P A + C + + PT
Sbjct: 1069 GPGLKGGLVGTPAPFSIDTKGAGTGGLGLTVEGPCEAKI--ECQDNGDGSCAVSYLPTEP 1126
Query: 117 GVYKIDVLQGARPVRGSPY---LCQVYDASKVKIEHKGLSNIVVNDPISFKCKSTE 169
G Y I++L + GSP+ + V+D SKV+ GL V + +F +E
Sbjct: 1127 GEYTINILFAEAHIPGSPFKATIRPVFDPSKVRASGPGLERGKVGEAATFTVDCSE 1182
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 62 QARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFAN--LLAEFTPTTTGVY 119
Q G +L+ S+ + +P G P C ++ N + FTP G +
Sbjct: 1956 QLNVGTSTDVSLKITESDLSQLTASIRAPSGNEEP--CLLKRLPNRHIGISFTPKEVGEH 2013
Query: 120 KIDVLQGARPVRGSPYL-----CQVYDASKVKIEHKGLS 153
+ V + + V SP+ ++ DASKV++ KGLS
Sbjct: 2014 VVSVRKSGKHVTNSPFKILVGPSEIGDASKVRVWGKGLS 2052
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 10/133 (7%)
Query: 39 PMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVR 98
P EV V A ++ G GL + G F +E G + P A +
Sbjct: 560 PFEVQVSPEAGVQKVRAWGPGLETGQVGKSADFVVEAIGTEVGTLGFSIEGPSQAKI--E 617
Query: 99 CYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVYDA------SKVKIEHKGL 152
C + + + PT G Y + V+ +R SP++ + A KVK GL
Sbjct: 618 CDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIRDSPFIAHILPAPPDCFPDKVKAFGPGL 677
Query: 153 --SNIVVNDPISF 163
+ +V+ P F
Sbjct: 678 EPTGCIVDKPAEF 690
Score = 30.8 bits (68), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 78 VASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSP--Y 135
V E V P G K + + PT G++++ + + GSP +
Sbjct: 1793 VQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQF 1852
Query: 136 LCQVYDASKVKIEHKGLSNIVVNDPISF 163
++ V GLS+ +VN P +F
Sbjct: 1853 YVDAINSRHVSAYGPGLSHGMVNKPATF 1880
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL + + V F ++T + + P + V + C + + PT
Sbjct: 2048 GKGLSEGHTFQVAEFIVDTRNAGYGGLGLSIEGP--SKVDINCEDMEDGTCKVTYCPTEP 2105
Query: 117 GVYKIDVLQGARPVRGSPYLCQVYDASKVK 146
G Y I++ + V GSP+ +V ++K
Sbjct: 2106 GTYIINIKFADKHVPGSPFTVKVTGEGRMK 2135
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Query: 22 GLVQARTLREETSFRSCPMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASS 81
GL Q + P++ VD R S G GL +FT+ T
Sbjct: 1832 GLHQMGIKYDGNHIPGSPLQF-YVDAINSRHVSAYGPGLSHGMVNKPATFTIVTKDAGEG 1890
Query: 82 EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV 139
+ V P A + C K + PT G Y I V + + GSP+ ++
Sbjct: 1891 GLSLAVEGPSKAEI--TCKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAKI 1946
Score = 30.0 bits (66), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 6/116 (5%)
Query: 60 LYQARSGIVNSFTLETCGVASS-EFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGV 118
L + R G S T + G ASS + VTSP G + + + F P G
Sbjct: 2226 LGRERLGSFGSITRQQEGEASSQDMTAQVTSPSGKVEAAEIVEGEDSAYSVRFVPQEMGP 2285
Query: 119 YKIDVLQGARPVRGSPYLCQV-----YDASKVKIEHKGLSNIVVNDPISFKCKSTE 169
+ + V + V GSP+ V A KV+ GL V P F + E
Sbjct: 2286 HTVAVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLERGVAGVPAEFSIWTRE 2341
>sp|Q80X90|FLNB_MOUSE Filamin-B OS=Mus musculus GN=Flnb PE=1 SV=3
Length = 2602
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL +A + N FT+ T G + V P + + C K + AE+ P
Sbjct: 1335 GPGLKEAFTNKSNVFTVVTRGAGIGGLGITVEGPSESKI--NCRDNKDGSCSAEYIPFAP 1392
Query: 117 GVYKIDVLQGARPVRGSPYLC---QVYDASKVKIEHKGLSNIV 156
G Y +++ G + GSP+ V D SKVKI GLS+ V
Sbjct: 1393 GDYDVNITYGGVHIPGSPFRVPSKDVVDPSKVKIAGPGLSSCV 1435
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
Query: 66 GIVNSFTLETCGVAS-SEFDVIVTSPQGAAVPVRCYQQKFANL---LAEFTPTTTGVYKI 121
G F ++T G + DV + SP VP C A A+F P G++ +
Sbjct: 959 GKDQEFAIDTNGAGGQGKLDVTILSPSRKVVP--CLVAPVAGRECSTAKFIPREEGLFAV 1016
Query: 122 DVLQGARPVRGSPYLCQVY---DASKVKIEHKGLSNIVVNDPISF 163
DV PV GSPY + D +KVK GL +V P F
Sbjct: 1017 DVTYDGHPVPGSPYTVEASLPPDPTKVKAHGPGLEGGLVGKPAEF 1061
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 39 PMEVP---VVDPAVGREPSGSGLGLYQ-ARSGIVNSFTLETCGVASSEFDVIVTSPQGAA 94
P VP VVDP+ + +G GL R+ I SFT+++ + +V V P+G
Sbjct: 1410 PFRVPSKDVVDPSKVKI---AGPGLSSCVRACIPQSFTVDSSKAGLAPLEVRVLGPRGLV 1466
Query: 95 VPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKG 151
PV +TP+ G Y + V + SP+ +V YDASKV G
Sbjct: 1467 EPVNVVDNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPG 1526
Query: 152 LS 153
LS
Sbjct: 1527 LS 1528
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 71 FTLETCGVASSEFDVIVTSPQGAAVPVRCY--QQKFANLLAEFTPTTTGVYKIDVLQGAR 128
FT++T + V V P+G R K E+ P TG++K+ VL +
Sbjct: 277 FTVDTISAGQGDVMVFVEDPEGNKEEARVTPDSDKNKTYSVEYLPKVTGLHKVIVLFAGQ 336
Query: 129 PVRGSPYLCQVY----DASKVKIEHKGLSNI--VVNDPISF 163
+ SP+ V DASKV + GL + N P F
Sbjct: 337 HISKSPFEVNVDKAQGDASKVTAKGPGLETTGNIANKPTYF 377
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 55 GSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSP-QGAAV-PVRCYQQKFANLLAEFT 112
G GL +G FT+ T G + +V +SP G AV + + ++T
Sbjct: 852 GPGLSKAGVENGKPTHFTVHTKGAGKAPLNVQFSSPLPGEAVKDLDIIDNYDYSHTVKYT 911
Query: 113 PTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIV 156
PT G ++ V G P+ SP+ V D SK+KI GL N V
Sbjct: 912 PTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKI--NGLENRV 956
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLA--EF 111
SG GL R F ++T S E V V P+G V+ Q+ F + + E+
Sbjct: 458 SGRGLQPKGVRIRETADFKVDTKAAGSGELGVTVKGPKGLEELVK--QKGFLDGVYSFEY 515
Query: 112 TPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVNDPISFKCKS 167
P+T G Y + V G + SP+ QV KV+ GL +V F +S
Sbjct: 516 YPSTPGKYSVAVTWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVES 574
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
Query: 54 SGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTP 113
S G GL + +FT+ T D+ + P A + C K + P
Sbjct: 1825 SAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEI--SCIDNKDGTCTVTYLP 1882
Query: 114 TTTGVYKIDVLQGARPVRGSPYLCQVYDASK 144
T G Y I V + + GSP+ ++ D ++
Sbjct: 1883 TLPGDYSILVKYNDKHIPGSPFTAKITDDNR 1913
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 110 EFTPTTTGVYKIDVLQGARPVRGSPYLCQV---YDASKVKIEHKGLSNIVVND 159
++ P G Y I VL ++ + SP+ +V +DASKVK E GLS V +
Sbjct: 810 KYVPPAPGRYTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVEN 862
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 70 SFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARP 129
SF + G A + D V SP GA + + F P G++ IDV
Sbjct: 2307 SFAIRLNG-AKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSH 2365
Query: 130 VRGSPYLCQV 139
V GSP+ +V
Sbjct: 2366 VVGSPFKVRV 2375
>sp|Q9VEN1|FLNA_DROME Filamin-A OS=Drosophila melanogaster GN=cher PE=1 SV=2
Length = 2210
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL +G +FT+ T G ++ + V P A + + K + ++ PT
Sbjct: 1435 GPGLTHGVTGEPANFTISTKGASAGGLTMAVEGPSKADI--NYHDNKDGTVSVQYLPTAP 1492
Query: 117 GVYKIDVLQGARPVRGSPYLCQV 139
G Y++ V G + ++GSPY ++
Sbjct: 1493 GEYQVSVRFGDKHIKGSPYFAKI 1515
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 16 PSWISYGLVQARTLREETSFRSCPMEVPVVDPAVG--REPSGSGLGLYQARSGIVNSFTL 73
P I LV + L + + P +V V + VG ++ SG GL + ++ N F++
Sbjct: 1577 PREIGEHLVSVKRLGKH--INNSPFKVTVCEREVGDAKKVKVSGTGLKEGQTHADNIFSV 1634
Query: 74 ETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGS 133
+T V + P A + +C + L + PT G Y +++ V GS
Sbjct: 1635 DTRNAGFGGLSVSIEGPSKAEI--QCTDKDDGTLNISYKPTEPGYYIVNLKFADHHVEGS 1692
Query: 134 PYLCQV 139
P+ +V
Sbjct: 1693 PFTVKV 1698
Score = 37.7 bits (86), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 35/76 (46%)
Query: 71 FTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPV 130
F ++T ++ +V + +P+G A+ R + + F P G Y+ + G + +
Sbjct: 1149 FEIDTKQAGQADINVAIKNPKGKAMQPRLEEVSTGTYVVSFVPDECGTYQCSIKYGDKEI 1208
Query: 131 RGSPYLCQVYDASKVK 146
GSP+ + + + K
Sbjct: 1209 EGSPFKLEAFPTGEAK 1224
Score = 37.4 bits (85), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 70 SFTLETCGVASSEFDVIVTSPQG--AAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGA 127
+FT+ET DV + P G VR K + P + G +K+ V
Sbjct: 276 NFTVETFSAGKGSVDVDIQGPNGEIEKADVRFNNDKNLTYTVSYIPKSEGSHKVAVKFSG 335
Query: 128 RPVRGSPYLCQVY----DASKVKIEHKGL--SNIVVNDPISF 163
R + SP+ +V DASKVK+ G+ + + + P F
Sbjct: 336 RDIPKSPFPVKVEGHAGDASKVKVTGPGIQPNGVTIKKPTFF 377
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL G +F +ET G + V P A + C+ + L ++ PT
Sbjct: 556 GPGLSSGVIGYPAAFVVETNG-ETGALGFTVAGPSQAEI--ECHDNGDGSALVKYHPTAV 612
Query: 117 GVYKIDVLQGARPVRGSPYLCQV-----YDASKVKIEHKGL--SNIVVNDPISF 163
G Y + +L + SP++ Q+ + VK GL + + +N P SF
Sbjct: 613 GEYAVHILCDNEDIPKSPFIAQILPRTDFHPELVKASGPGLEKNGVTINQPTSF 666
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Query: 57 GLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTT 116
G GL + + N FT+ET G + + + P A + C + + ++ T
Sbjct: 942 GPGLEKGLTNQKNKFTVETKGAGNGGLSLAIEGPSEAK--MTCTDNRDGSCDVDYLATDP 999
Query: 117 GVYKIDVLQGARPVRGSPY---LCQVYDASKVKIEHKGLSN 154
G Y I + + + GSP+ + + D SKVK+ G+ +
Sbjct: 1000 GEYDITIRFADKHIPGSPFRVLVEETVDPSKVKVYGPGIEH 1040
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 39 PMEVPVVDPAVGREPSGSGLGLYQARSGIVNSFTLETCGVASSEFDVIVTSPQGAAVPVR 98
P++V + A SG GL R G F + T G E +V V P G V
Sbjct: 444 PVKVAPLSDARKVRASGRGLQATGVRVGDDADFKIYTEGAGEGEPEVRVIGPGGMNQNVM 503
Query: 99 CYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQV--YDASKVKIEHKGLSNIV 156
+ + PT G Y I V + V SP+ +V S + GLS+ V
Sbjct: 504 QSKVDGNTYECHYYPTKEGRYVIMVTFAGQEVAKSPFEVKVGPKKESSIVAYGPGLSSGV 563
Query: 157 VNDPISFKCKSTEE 170
+ P +F ++ E
Sbjct: 564 IGYPAAFVVETNGE 577
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 87 VTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY---LC--QVYD 141
+ +P G P + N+ FTP G + + V + + + SP+ +C +V D
Sbjct: 1551 IQAPSGLEEPCFLKRMPTGNIGISFTPREIGEHLVSVKRLGKHINNSPFKVTVCEREVGD 1610
Query: 142 ASKVKIEHKGL 152
A KVK+ GL
Sbjct: 1611 AKKVKVSGTGL 1621
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 70 SFTLETCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARP 129
SFT++ ++ DV+V G +PV +TPT+ + ++V G
Sbjct: 665 SFTVDPSKAGNAPLDVVVQDVFGTKLPVELKNNPDGTKKVTYTPTSGVPHTVEVNYGGVS 724
Query: 130 VRGSPYLCQV---YDASKVK 146
SP+ V DA+KV+
Sbjct: 725 TPNSPHRVYVGVPVDAAKVQ 744
>sp|O75382|TRIM3_HUMAN Tripartite motif-containing protein 3 OS=Homo sapiens GN=TRIM3 PE=1
SV=2
Length = 744
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 48 AVGREPSGSGLGLYQARSGIVNSFTLET-------CGVASSEFDVIVTSPQGAAVPVRCY 100
A E +G GL QA G S T+ T S+E +T P G +PV
Sbjct: 320 ATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELRAEITGPDGTRLPVPVV 379
Query: 101 QQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY 135
K +T T G + VL +PVRGSP+
Sbjct: 380 DHKNGTYELVYTARTEGELLLSVLLYGQPVRGSPF 414
>sp|O70277|TRIM3_RAT Tripartite motif-containing protein 3 OS=Rattus norvegicus GN=Trim3
PE=1 SV=1
Length = 744
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 48 AVGREPSGSGLGLYQARSGIVNSFTLET-------CGVASSEFDVIVTSPQGAAVPVRCY 100
A E +G GL QA G S T+ T S+E +T P G + V
Sbjct: 320 AAAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELCAEITGPDGMRLAVPVV 379
Query: 101 QQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY 135
K +T T G + VL +PVRGSP+
Sbjct: 380 DHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPF 414
>sp|Q9R1R2|TRIM3_MOUSE Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3 PE=1
SV=1
Length = 744
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 48 AVGREPSGSGLGLYQARSGIVNSFTLET-------CGVASSEFDVIVTSPQGAAVPVRCY 100
A E +G GL QA G S T+ T S+E +T P G + V
Sbjct: 320 ATAHETVATGEGLRQALVGQPASLTVTTKDKDGRLVRTGSAELCAEITGPDGVRLAVPVV 379
Query: 101 QQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY 135
K +T T G + VL +PVRGSP+
Sbjct: 380 DHKNGTYELVYTARTEGDLLLSVLLYGQPVRGSPF 414
>sp|Q55EI8|Y9956_DICDI Probable serine/threonine-protein kinase DDB_G0268876
OS=Dictyostelium discoideum GN=DDB_G0268876 PE=3 SV=1
Length = 1385
Score = 33.1 bits (74), Expect = 0.78, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 19/143 (13%)
Query: 41 EVPVVDPAVGREPSGSGLGLYQARSGIVNSFTL---ETCGV----ASSEFDVIVTSPQGA 93
E P + AVG+ GLY+ SG++ L ++ G+ S F + V
Sbjct: 165 ECPALCFAVGK-------GLYRGISGVIYEIKLYRVDSKGMLIVNTSLNFQIDVIKKDSI 217
Query: 94 AVPVR----CYQQKFANL-LAEFTPTTTGVYKIDVLQGARPVRGSPYLCQVYDASKVKIE 148
+V R Y+Q+ ++ L + P G Y I + P+ GSP+ C + D ++
Sbjct: 218 SVEDRKMAFTYEQRKSDYSLLKLQPIIYGEYSISIKIDDTPICGSPFHCTIIDELNPNLK 277
Query: 149 HKGLSNIVVNDPISFKCKSTEEP 171
SN + + + + +P
Sbjct: 278 ELAFSNEWIEEVVQLITLMSNKP 300
>sp|Q9H8W5|TRI45_HUMAN Tripartite motif-containing protein 45 OS=Homo sapiens GN=TRIM45
PE=1 SV=2
Length = 580
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 12/100 (12%)
Query: 45 VDPAVGREPSGSGLGLYQARSGIVNSFTL-------ETCGVASSEFDVIVTSPQGAAVPV 97
VDPA + G L++AR SFTL E G V V PV
Sbjct: 397 VDPA---KCVLQGEDLHRAREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPV 453
Query: 98 RCYQQ--KFANLLAEFTPTTTGVYKIDVLQGARPVRGSPY 135
R Q K +TP GVY + V + V+GSP+
Sbjct: 454 RTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPF 493
>sp|Q9MZD2|FLNB_RABIT Filamin-B (Fragment) OS=Oryctolagus cuniculus GN=FLNB PE=1 SV=1
Length = 294
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 79 ASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSPYLCQ 138
A + D V SP GA + + F P G++ IDV V GSP+ +
Sbjct: 7 AKGKIDAKVHSPSGAVEECHVSELEPDKYAVRFIPHENGIHTIDVKFNGSHVVGSPFKVR 66
Query: 139 V 139
V
Sbjct: 67 V 67
>sp|Q8IW52|SLIK4_HUMAN SLIT and NTRK-like protein 4 OS=Homo sapiens GN=SLITRK4 PE=2 SV=1
Length = 837
Score = 30.0 bits (66), Expect = 8.3, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 75 TCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSP 134
TCG+ SE + + P G V +R K +LL T + ID L P R S
Sbjct: 699 TCGLKESETGFMFSDPPGQKVVMRNVADKEKDLL--HVDTRKRLSTIDELDELFPSRDSN 756
Query: 135 YLCQVYDASKVKIEHKGLSNIVVNDP 160
Q + SK + G+S + P
Sbjct: 757 VFIQNFLESKKEYNSIGVSGFEIRYP 782
>sp|Q810B8|SLIK4_MOUSE SLIT and NTRK-like protein 4 OS=Mus musculus GN=Slitrk4 PE=2 SV=2
Length = 837
Score = 29.6 bits (65), Expect = 9.6, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Query: 75 TCGVASSEFDVIVTSPQGAAVPVRCYQQKFANLLAEFTPTTTGVYKIDVLQGARPVRGSP 134
TCG+ SE + + P G V +R K +LL T + ID L P R S
Sbjct: 699 TCGLKESETGFMFSDPPGQKVMMRNAADKDKDLL--HVDTRKRLSTIDELDELFPSRDSN 756
Query: 135 YLCQVYDASKVKIEHKGLSNIVVNDP 160
Q + SK + G+S + P
Sbjct: 757 VFIQNFLESKKEYNSIGVSGFEIRYP 782
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,441,727
Number of Sequences: 539616
Number of extensions: 2523249
Number of successful extensions: 5522
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 5342
Number of HSP's gapped (non-prelim): 172
length of query: 171
length of database: 191,569,459
effective HSP length: 109
effective length of query: 62
effective length of database: 132,751,315
effective search space: 8230581530
effective search space used: 8230581530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)