Query psy15728
Match_columns 139
No_of_seqs 125 out of 2408
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 19:54:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.6E-22 9E-27 130.0 5.0 120 7-138 31-150 (169)
2 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.9E-21 6.5E-26 113.9 7.8 81 48-138 2-82 (93)
3 2zgd_A 3 repeat synthetic anky 99.8 3.2E-20 1.1E-24 111.9 9.5 89 40-138 16-104 (110)
4 4gpm_A Engineered protein OR26 99.8 9.8E-20 3.4E-24 117.8 7.6 111 16-138 7-117 (169)
5 1d9s_A Cyclin-dependent kinase 99.8 6.4E-21 2.2E-25 118.8 1.7 119 7-138 6-125 (136)
6 3aaa_C Myotrophin, protein V-1 99.8 3.2E-19 1.1E-23 109.2 9.2 79 49-137 8-86 (123)
7 3twr_A Tankyrase-2; ankyrin re 99.8 2E-20 6.7E-25 119.9 2.6 116 12-138 7-122 (165)
8 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.3E-19 7.8E-24 121.6 7.6 115 11-138 3-117 (239)
9 2jab_A H10-2-G3; HER2, darpin, 99.8 8.4E-19 2.9E-23 109.2 9.4 117 10-138 11-127 (136)
10 2rfm_A Putative ankyrin repeat 99.8 1.4E-19 4.9E-24 118.5 6.0 117 9-137 31-147 (192)
11 1awc_B Protein (GA binding pro 99.8 7.7E-20 2.6E-24 115.9 4.2 118 9-138 30-147 (153)
12 3f6q_A Integrin-linked protein 99.8 7.9E-20 2.7E-24 118.6 3.9 114 13-137 5-118 (179)
13 3v30_A DNA-binding protein rfx 99.8 1.3E-19 4.6E-24 116.7 4.8 118 9-138 32-149 (172)
14 3deo_A Signal recognition part 99.8 4.2E-20 1.4E-24 120.5 2.0 113 12-137 43-156 (183)
15 3c5r_A BARD-1, BRCA1-associate 99.8 4.1E-19 1.4E-23 110.6 6.4 117 8-136 5-121 (137)
16 3v31_A Ankyrin repeat family A 99.8 1.5E-19 5E-24 116.0 3.9 118 9-138 32-149 (167)
17 2jab_A H10-2-G3; HER2, darpin, 99.8 9.5E-19 3.3E-23 108.9 7.3 85 44-138 10-94 (136)
18 4b93_B Ankyrin repeat domain-c 99.8 2.8E-19 9.5E-24 123.4 5.1 52 86-137 147-198 (269)
19 1bi7_B P16INK4A, MTS1, multipl 99.8 2.5E-20 8.5E-25 118.7 -0.2 118 8-138 7-125 (156)
20 3v30_A DNA-binding protein rfx 99.8 2.3E-19 7.7E-24 115.6 4.2 114 14-138 3-116 (172)
21 3v31_A Ankyrin repeat family A 99.8 2.3E-19 8E-24 115.0 4.2 115 12-138 2-116 (167)
22 1bd8_A P19INK4D CDK4/6 inhibit 99.8 4.7E-20 1.6E-24 117.0 0.8 117 8-138 31-147 (156)
23 2rfa_A Transient receptor pote 99.8 4.5E-19 1.5E-23 119.0 5.6 131 7-138 31-168 (232)
24 1dcq_A PYK2-associated protein 99.8 9.5E-19 3.2E-23 121.3 7.3 84 45-138 166-252 (278)
25 2pnn_A Transient receptor pote 99.8 3.8E-19 1.3E-23 122.3 5.3 135 4-138 4-162 (273)
26 3deo_A Signal recognition part 99.8 4.1E-18 1.4E-22 111.0 9.5 83 45-138 41-124 (183)
27 2rfm_A Putative ankyrin repeat 99.8 3.5E-19 1.2E-23 116.7 4.3 118 9-138 64-181 (192)
28 3d9h_A CDNA FLJ77766, highly s 99.8 7E-19 2.4E-23 122.0 6.0 124 5-138 7-139 (285)
29 3ui2_A Signal recognition part 99.8 3.1E-19 1.1E-23 121.4 4.1 112 12-136 44-156 (244)
30 2y1l_E Darpin-8.4; hydrolase-i 99.8 5.4E-19 1.8E-23 113.7 4.9 118 9-138 43-160 (169)
31 1yyh_A HN1;, notch 1, ankyrin 99.8 7.3E-19 2.5E-23 119.8 5.8 118 9-138 120-237 (253)
32 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.2E-19 1.4E-23 108.4 4.0 114 13-138 2-115 (126)
33 2etb_A Transient receptor pote 99.8 2.2E-18 7.5E-23 117.4 7.7 124 9-133 39-181 (256)
34 3jxi_A Vanilloid receptor-rela 99.8 1.3E-18 4.5E-23 118.6 6.5 125 11-136 44-188 (260)
35 2etb_A Transient receptor pote 99.8 3.8E-19 1.3E-23 121.2 3.7 126 13-138 2-150 (256)
36 2vge_A RELA-associated inhibit 99.7 3.5E-18 1.2E-22 115.3 8.3 81 47-137 20-100 (229)
37 1yyh_A HN1;, notch 1, ankyrin 99.7 3.7E-18 1.3E-22 116.3 8.2 119 8-137 5-137 (253)
38 3c5r_A BARD-1, BRCA1-associate 99.7 4.9E-20 1.7E-24 114.8 -1.1 85 44-138 6-90 (137)
39 2l6b_A NR1C; ankyrin, consensu 99.7 4.2E-19 1.4E-23 107.4 2.9 84 45-138 6-89 (115)
40 4hbd_A KN motif and ankyrin re 99.7 5.4E-19 1.9E-23 122.2 3.8 84 45-138 180-264 (276)
41 1ikn_D Protein (I-kappa-B-alph 99.7 2.3E-18 8E-23 116.0 6.6 88 47-138 77-165 (236)
42 1bd8_A P19INK4D CDK4/6 inhibit 99.7 7.7E-19 2.6E-23 111.4 3.9 112 15-138 4-115 (156)
43 1awc_B Protein (GA binding pro 99.7 3.3E-18 1.1E-22 108.3 6.7 84 45-138 31-114 (153)
44 1ihb_A P18-INK4C(INK6), cyclin 99.7 6.5E-19 2.2E-23 112.3 3.2 117 9-138 34-151 (162)
45 1oy3_D Transcription factor in 99.7 1.6E-18 5.3E-23 119.1 5.3 84 45-138 155-239 (282)
46 2dzn_A Probable 26S proteasome 99.7 8.7E-19 3E-23 117.2 3.9 81 47-137 106-187 (228)
47 3ui2_A Signal recognition part 99.7 8.5E-18 2.9E-22 114.3 8.7 82 46-138 43-125 (244)
48 1ikn_D Protein (I-kappa-B-alph 99.7 2.3E-18 8E-23 116.0 5.7 81 47-137 116-197 (236)
49 2b0o_E UPLC1; arfgap, structur 99.7 5.2E-19 1.8E-23 123.9 2.5 84 45-138 187-273 (301)
50 3aaa_C Myotrophin, protein V-1 99.7 6.9E-18 2.4E-22 103.2 7.1 111 12-134 6-116 (123)
51 1d9s_A Cyclin-dependent kinase 99.7 6.9E-19 2.4E-23 109.6 2.6 82 46-138 10-92 (136)
52 4b93_B Ankyrin repeat domain-c 99.7 4.1E-18 1.4E-22 117.5 6.7 119 10-139 49-167 (269)
53 2rfa_A Transient receptor pote 99.7 1.8E-18 6.1E-23 116.1 4.5 120 13-138 3-135 (232)
54 3hra_A Ankyrin repeat family p 99.7 1.4E-18 4.9E-23 114.2 3.6 82 47-138 105-192 (201)
55 3kea_A K1L; tropism, ANK repea 99.7 5.9E-19 2E-23 122.5 1.6 118 7-138 25-143 (285)
56 2pnn_A Transient receptor pote 99.7 5.7E-18 2E-22 116.4 6.4 127 9-136 50-196 (273)
57 3jxi_A Vanilloid receptor-rela 99.7 1.3E-18 4.4E-23 118.7 3.2 126 13-138 5-154 (260)
58 3ehr_A Osteoclast-stimulating 99.7 7.6E-18 2.6E-22 112.6 6.8 82 47-138 72-154 (222)
59 2f8y_A Notch homolog 1, transl 99.7 2.6E-18 8.8E-23 114.6 4.3 49 88-136 155-203 (223)
60 3ljn_A Hypothetical protein; a 99.7 1.1E-18 3.9E-23 124.3 2.6 123 9-138 134-258 (364)
61 4hbd_A KN motif and ankyrin re 99.7 6.1E-18 2.1E-22 116.9 6.1 98 41-138 104-230 (276)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.2E-18 4.1E-23 118.0 2.4 116 12-139 36-154 (239)
63 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.7E-17 5.8E-22 101.2 7.3 81 48-138 2-82 (126)
64 2f8y_A Notch homolog 1, transl 99.7 4.1E-18 1.4E-22 113.6 4.8 120 8-138 53-172 (223)
65 2y1l_E Darpin-8.4; hydrolase-i 99.7 4.4E-17 1.5E-21 104.8 9.3 116 11-138 12-127 (169)
66 2dzn_A Probable 26S proteasome 99.7 2.7E-18 9.1E-23 114.8 3.7 122 9-138 32-154 (228)
67 2xai_A ASB-9, ankyrin repeat a 99.7 2.1E-17 7.2E-22 113.1 7.9 80 48-137 3-82 (261)
68 3utm_A Tankyrase-1; tankyrase, 99.7 3.6E-18 1.2E-22 120.3 4.1 116 12-138 23-138 (351)
69 3f6q_A Integrin-linked protein 99.7 5.3E-19 1.8E-23 114.7 -0.1 118 8-137 34-151 (179)
70 3lvq_E ARF-GAP with SH3 domain 99.7 1.2E-17 4.1E-22 124.0 6.9 84 45-138 168-254 (497)
71 1oy3_D Transcription factor in 99.7 2.8E-18 9.4E-23 117.8 3.1 117 8-135 153-269 (282)
72 3aji_A 26S proteasome non-ATPa 99.7 6.9E-18 2.4E-22 113.1 4.6 80 47-136 72-151 (231)
73 3ehr_A Osteoclast-stimulating 99.7 4E-19 1.4E-23 118.9 -1.4 115 10-136 70-185 (222)
74 3t8k_A Uncharacterized protein 99.7 2.2E-18 7.5E-23 113.1 2.1 109 14-135 7-126 (186)
75 1ihb_A P18-INK4C(INK6), cyclin 99.7 1.2E-17 4.2E-22 106.3 5.5 113 13-138 5-117 (162)
76 1sw6_A Regulatory protein SWI6 99.7 4.5E-18 1.5E-22 120.1 3.7 127 8-135 159-327 (327)
77 1s70_B 130 kDa myosin-binding 99.7 7.1E-17 2.4E-21 111.9 9.3 84 45-138 37-120 (299)
78 1k1a_A B-cell lymphoma 3-encod 99.7 9.7E-18 3.3E-22 112.8 4.5 81 47-137 115-196 (241)
79 3b7b_A Euchromatic histone-lys 99.7 1.1E-17 3.8E-22 112.4 4.7 80 47-136 110-189 (237)
80 3twr_A Tankyrase-2; ankyrin re 99.7 7.9E-17 2.7E-21 103.0 8.3 86 44-138 4-89 (165)
81 1bi7_B P16INK4A, MTS1, multipl 99.7 7.2E-18 2.5E-22 107.2 3.2 83 45-138 9-92 (156)
82 3jue_A Arfgap with coiled-coil 99.7 4.3E-17 1.5E-21 117.0 7.4 83 46-138 233-315 (368)
83 3aji_A 26S proteasome non-ATPa 99.7 1.8E-17 6.3E-22 111.0 5.1 116 10-137 70-185 (231)
84 2vge_A RELA-associated inhibit 99.7 1.3E-18 4.6E-23 117.4 -1.0 116 10-137 18-136 (229)
85 3hra_A Ankyrin repeat family p 99.7 1.4E-17 4.9E-22 109.3 3.7 117 9-136 35-152 (201)
86 2xai_A ASB-9, ankyrin repeat a 99.7 2E-17 6.9E-22 113.2 4.4 115 9-136 32-146 (261)
87 2fo1_E LIN-12 protein; beta-ba 99.7 1E-17 3.5E-22 120.2 3.0 82 47-138 278-360 (373)
88 1n11_A Ankyrin; clathrin, BAND 99.7 1.5E-17 5.1E-22 121.0 3.8 82 46-137 309-390 (437)
89 1wdy_A 2-5A-dependent ribonucl 99.7 8.2E-18 2.8E-22 115.3 2.3 115 13-138 5-119 (285)
90 3t8k_A Uncharacterized protein 99.7 1.4E-18 4.7E-23 114.0 -1.8 116 11-137 36-167 (186)
91 1n11_A Ankyrin; clathrin, BAND 99.7 1.1E-17 3.9E-22 121.6 2.7 119 8-138 9-127 (437)
92 1k1a_A B-cell lymphoma 3-encod 99.7 1.2E-16 4E-21 107.5 7.4 121 8-138 4-130 (241)
93 2fo1_E LIN-12 protein; beta-ba 99.7 2.6E-17 8.9E-22 118.1 4.3 117 8-138 89-213 (373)
94 1wdy_A 2-5A-dependent ribonucl 99.7 7.5E-16 2.6E-20 105.5 10.3 84 46-138 3-86 (285)
95 3kea_A K1L; tropism, ANK repea 99.7 9.9E-17 3.4E-21 111.2 5.7 83 44-138 27-109 (285)
96 3d9h_A CDNA FLJ77766, highly s 99.7 4.1E-17 1.4E-21 113.1 3.7 46 91-136 157-202 (285)
97 3ljn_A Hypothetical protein; a 99.7 1.5E-17 5.2E-22 118.5 1.4 127 8-138 48-187 (364)
98 4g8k_A 2-5A-dependent ribonucl 99.7 1.9E-17 6.6E-22 116.8 1.6 127 11-138 23-182 (337)
99 3b7b_A Euchromatic histone-lys 99.6 3E-16 1E-20 105.4 6.8 120 7-138 5-125 (237)
100 4g8k_A 2-5A-dependent ribonucl 99.6 3.3E-15 1.1E-19 105.4 11.7 87 41-137 18-138 (337)
101 3jue_A Arfgap with coiled-coil 99.6 1.4E-15 4.8E-20 109.2 9.0 83 46-138 197-282 (368)
102 3eu9_A Huntingtin-interacting 99.6 3.6E-16 1.2E-20 104.7 5.4 116 10-136 39-154 (240)
103 3utm_A Tankyrase-1; tankyrase, 99.6 1.7E-15 5.7E-20 106.6 8.9 88 42-138 18-105 (351)
104 1dcq_A PYK2-associated protein 99.6 3.3E-15 1.1E-19 103.5 10.2 89 46-138 128-219 (278)
105 3lvq_E ARF-GAP with SH3 domain 99.6 1.3E-15 4.3E-20 113.1 8.1 86 49-138 133-221 (497)
106 1s70_B 130 kDa myosin-binding 99.6 5.1E-16 1.7E-20 107.6 4.8 114 11-136 38-151 (299)
107 3eu9_A Huntingtin-interacting 99.6 4E-16 1.4E-20 104.5 3.8 118 10-138 6-123 (240)
108 2b0o_E UPLC1; arfgap, structur 99.6 5.1E-15 1.8E-19 103.6 8.5 87 48-138 151-240 (301)
109 2l6b_A NR1C; ankyrin, consensu 99.6 1.2E-16 4E-21 96.6 -1.2 109 9-129 5-113 (115)
110 1sw6_A Regulatory protein SWI6 99.6 3.8E-16 1.3E-20 110.2 1.2 80 44-133 127-210 (327)
111 2aja_A Ankyrin repeat family p 99.5 5.6E-17 1.9E-21 116.8 -4.5 119 12-138 91-213 (376)
112 1n0q_A 3ANK, 3 ankyrin repeats 99.5 6.1E-15 2.1E-19 85.9 2.6 92 13-116 2-93 (93)
113 2aja_A Ankyrin repeat family p 99.4 1.4E-13 4.8E-18 99.1 1.6 84 47-138 91-177 (376)
114 2zgd_A 3 repeat synthetic anky 99.3 3.5E-12 1.2E-16 76.3 4.3 53 86-138 19-71 (110)
115 3zrh_A Ubiquitin thioesterase 59.9 46 0.0016 24.4 7.0 59 53-112 27-90 (454)
116 1gp8_A Protein (scaffolding pr 51.7 18 0.00061 16.8 2.8 21 48-68 13-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=2.6e-22 Score=129.95 Aligned_cols=120 Identities=28% Similarity=0.363 Sum_probs=96.5
Q ss_pred CccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCcc
Q psy15728 7 RIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGES 86 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~ 86 (139)
..++..|.++++.++..+.......+.. .+.+.+ ..+..+.||||+|+..|+.++++.|+..+++++ .
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~-~gad~~-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn----------~ 98 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLIS-KGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGADVN----------A 98 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------C
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHh-cccchh-hhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC----------C
Confidence 3456778888888887776654333321 222222 234567899999999999999999999885443 5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 87 ~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 99 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 99 KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 7889999999999999999999999999999999999999999999999864
No 2
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=1.9e-21 Score=113.88 Aligned_cols=81 Identities=42% Similarity=0.580 Sum_probs=74.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcH
Q psy15728 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTP 127 (139)
Q Consensus 48 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tp 127 (139)
+.|+||+|+..|+.++++.|+..+++++ .+|..|+||||+|+..++.+++++|++.|++++.+|..|+||
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n----------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~ 71 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN----------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 71 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCH
Confidence 5789999999999999999999885443 578899999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcc
Q psy15728 128 LHKAAFVGREV 138 (139)
Q Consensus 128 l~~A~~~g~~~ 138 (139)
||+|+..|+.+
T Consensus 72 l~~A~~~~~~~ 82 (93)
T 1n0q_A 72 LHLAARNGHLE 82 (93)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHcCCHH
Confidence 99999998764
No 3
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=3.2e-20 Score=111.94 Aligned_cols=89 Identities=30% Similarity=0.414 Sum_probs=76.4
Q ss_pred hhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc
Q psy15728 40 LNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINA 119 (139)
Q Consensus 40 ~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 119 (139)
.....+.++.++||+|+..|+.++++.|+..+++++ .+|..|.||||+|+..++.+++++|++.|++++.
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~----------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~ 85 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA----------AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA 85 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC----------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 334455678999999999999999999999875433 5788899999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHhCCcc
Q psy15728 120 VNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 120 ~~~~g~tpl~~A~~~g~~~ 138 (139)
+|..|+||||+|+..|+.+
T Consensus 86 ~d~~g~tpl~~A~~~~~~~ 104 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNED 104 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHH
T ss_pred cccCCCcHHHHHHHcCCHH
Confidence 9999999999999998864
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.80 E-value=9.8e-20 Score=117.83 Aligned_cols=111 Identities=31% Similarity=0.429 Sum_probs=88.0
Q ss_pred cchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHH
Q psy15728 16 RTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPL 95 (139)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l 95 (139)
.+..+++.+..+..+.+.. .+.+++. .+..+.|+||+|+..++.++++.|+..+++++ .+|..|+|||
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~-~Gadvn~-~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~----------~~d~~g~TpL 74 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIE-NGADVNA-SDSDGRTPLHHAAENGHKEVVKLLISKGADVN----------AKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHH-TTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSCCHH
T ss_pred HHHHHHHcCCHHHHHHHHH-CCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHhcccchh----------hhccCCCCHH
Confidence 3555666666555444332 2333333 34567889999999999999999998875443 5788999999
Q ss_pred HHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 96 HLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 96 ~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 75 h~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~ 117 (169)
T 4gpm_A 75 HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKE 117 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999864
No 5
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.80 E-value=6.4e-21 Score=118.83 Aligned_cols=119 Identities=15% Similarity=0.084 Sum_probs=97.7
Q ss_pred CccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCcc
Q psy15728 7 RIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGES 86 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~ 86 (139)
......+.++++.++..+..+..+.+... +.+.+. .+..+.++||+|+. |+.++++.|+..+++++ .
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~----------~ 72 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNA-LNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN----------C 72 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS----------C
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCC-cCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC----------C
Confidence 44567888999999998876655544432 223322 34567899999999 99999999999885443 5
Q ss_pred CCCC-CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 87 KSNL-GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 87 ~d~~-g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
+|.. |.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 7888 999999999999999999999999999999999999999999998764
No 6
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=3.2e-19 Score=109.23 Aligned_cols=79 Identities=34% Similarity=0.554 Sum_probs=43.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHH
Q psy15728 49 HELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPL 128 (139)
Q Consensus 49 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl 128 (139)
.++||+|+..|+.+.++.|+..+.+.+ .+|..|+||||+|+..++.+++++|++.|++++.+|..|+|||
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL 77 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVN----------RTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPL 77 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTT----------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcC----------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 455555555555555555555543221 3455555555555555555555555555555555555555555
Q ss_pred HHHHHhCCc
Q psy15728 129 HKAAFVGRE 137 (139)
Q Consensus 129 ~~A~~~g~~ 137 (139)
|+|+..|+.
T Consensus 78 ~~A~~~~~~ 86 (123)
T 3aaa_C 78 LSAVYEGHV 86 (123)
T ss_dssp HHHHHHTCH
T ss_pred HHHHHcCCH
Confidence 555555543
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.79 E-value=2e-20 Score=119.87 Aligned_cols=116 Identities=21% Similarity=0.268 Sum_probs=80.1
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLG 91 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g 91 (139)
.+.+.++.+++.+..+..+.+........ ......+.++||+|+..|+.++++.|+..+.+++ .+|..|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g 75 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNC-RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH----------AKDKGG 75 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTS
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCc-cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC----------ccCCCC
Confidence 34456666666666555554443322111 1223345688888888888888888887764332 467778
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 122 (165)
T 3twr_A 76 LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYE 122 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 88888888888888888888888888888888888888888877654
No 8
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=2.3e-19 Score=121.58 Aligned_cols=115 Identities=25% Similarity=0.316 Sum_probs=71.3
Q ss_pred cCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCC
Q psy15728 11 APGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNL 90 (139)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~ 90 (139)
..|.++++.+++.+.....+.+.. .+...+. ...+.++||+|+..|+.++++.|+..+++++ .+|..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~-~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~d~~ 69 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIA-HGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS----------LPNDE 69 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC----------CCCTT
T ss_pred ccccccCchhhhhhhHHHHHHHhc-cCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC----------CcCCC
Confidence 457778888888877776555543 2333332 2455899999999999999999998875443 56888
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+..
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~ 117 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQ 117 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999988754
No 9
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=8.4e-19 Score=109.16 Aligned_cols=117 Identities=25% Similarity=0.372 Sum_probs=87.5
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
...+.+.++.++..+..+..+.+... +.+.+. .+..+.++||+|+..|+.++++.|+..+++.+ .+|.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~d~ 78 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN-GADVNA-KDEYGLTPLYLATAHGHLEIVEVLLKNGADVN----------AVDA 78 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCT
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCC
Confidence 34455667777777776665544432 233322 33556788999998888888888888774333 5677
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHH
Confidence 8899999999999999999999999999989999999999999888754
No 10
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=1.4e-19 Score=118.51 Aligned_cols=117 Identities=23% Similarity=0.270 Sum_probs=68.7
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
++..|.+++|.++..+.....+.+... +.+.+ ..+..+.++||+|+..|+.++++.|+..+++.+ .+|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 98 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVEN-FDKLE-DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN----------TKD 98 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----------CCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccc-cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC----------CCC
Confidence 456677777777777765554443322 22222 123345677777777777777777777664332 345
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS 147 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 5566666666666666666666666666666666666666666655543
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=7.7e-20 Score=115.88 Aligned_cols=118 Identities=23% Similarity=0.229 Sum_probs=93.9
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+..+..+.+.. .+.+.+ ..+..+.|+||+|+..|+.++++.|+..+++++ .+|
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 97 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLR-AGVSRD-ARTKVDRTPLHMAASEGHANIVEVLLKHGADVN----------AKD 97 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTT-CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT----------CCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCC-CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC----------CCC
Confidence 35668888999988877554443332 122222 234457899999999999999999998875443 578
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 98 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 147 (153)
T 1awc_B 98 MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNED 147 (153)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 88999999999999999999999999999999999999999999998864
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.78 E-value=7.9e-20 Score=118.62 Aligned_cols=114 Identities=28% Similarity=0.382 Sum_probs=75.5
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
+.+.++.++..+.......+........ ...+..+.++||+|+..|+.++++.|+..+++++ .+|..|.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~ 73 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDL-NQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN----------VMNRGDD 73 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTCC
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----------CcCCCCC
Confidence 4455666666665554444333222222 2234456678888888888888888877764333 4567778
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~ 118 (179)
T 3f6q_A 74 TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD 118 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 888888888888888888888888888888888888888877764
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.78 E-value=1.3e-19 Score=116.69 Aligned_cols=118 Identities=23% Similarity=0.146 Sum_probs=84.0
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+..+..+.+.. .+.+.+. .+..+.++||+|+..|+.++++.|+..+.+.+ .+|
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 99 (172)
T 3v30_A 32 PDERGFTPLIWASAFGEIETVRFLLE-WGADPHI-LAKERESALSLASTGGYTDIVGLLLERDVDIN----------IYD 99 (172)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----------CCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCchh-hcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC----------CCC
Confidence 35567777777777766554443332 2222222 23456778888888888888888887764332 567
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 149 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRK 149 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHH
Confidence 77888888888888888888888888888888888888888888887754
No 14
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=4.2e-20 Score=120.50 Aligned_cols=113 Identities=18% Similarity=0.205 Sum_probs=74.8
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC-CC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS-NL 90 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d-~~ 90 (139)
.+.+++|.++..+.....+.+.. +.+.+. .+..+.|+||+|+..|+.++++.|+..+++++ .+| ..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----------~~~~~~ 109 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLD----------HRDMRG 109 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCSSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCC
Confidence 44556666666665554444443 222222 33456777777777777777777777764433 344 66
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..++.
T Consensus 110 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 156 (183)
T 3deo_A 110 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT 156 (183)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT
T ss_pred CCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC
Confidence 77888888888888888888877888777777788888877776543
No 15
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.77 E-value=4.1e-19 Score=110.59 Aligned_cols=117 Identities=24% Similarity=0.210 Sum_probs=85.9
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
.++..|.+.+|.++..+.....+.+.. .+.+.+ ..+..+.++||+|+..|+.++++.|+..+++.+ .+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~ 72 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ-NGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALVN----------TT 72 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc----------Cc
Confidence 456778888888888776555444332 122222 234466788888888888888888888774333 46
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
|..|.||||+|+..++.+++++|++.|++++.+|..|.|||++|+..+.
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence 7778888888888888888888888888888888888888888876543
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.77 E-value=1.5e-19 Score=115.98 Aligned_cols=118 Identities=23% Similarity=0.173 Sum_probs=82.8
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+.....+.+... +.+.+. ....+.++||+|+..|+.++++.|+..+++.+ .+|
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 99 (167)
T 3v31_A 32 TDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQL-LGKGRESALSLACSKGYTDIVKMLLDCGVDVN----------EYD 99 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT----------CCC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCC-cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC----------cCC
Confidence 355677777777777665443333222 222222 23455678888888888888888887764332 467
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 77888888888888888888888888888888888888888888887753
No 17
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.77 E-value=9.5e-19 Score=108.92 Aligned_cols=85 Identities=40% Similarity=0.606 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC
Q psy15728 44 SVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA 123 (139)
Q Consensus 44 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 123 (139)
....+.++||+|+..|+.++++.|+..+.+.+ .+|..|.||||+|+..++.+++++|++.|++++.+|..
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 79 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVN----------AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI 79 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCC----------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC
Confidence 34567899999999999999999999885433 57888999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|.||||+|+..|+.+
T Consensus 80 g~t~L~~A~~~~~~~ 94 (136)
T 2jab_A 80 GFTPLHLAAFIGHLE 94 (136)
T ss_dssp CCCHHHHHHHHTCHH
T ss_pred CCCHHHHHHHcCCHH
Confidence 999999999998754
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.77 E-value=2.8e-19 Score=123.40 Aligned_cols=52 Identities=40% Similarity=0.537 Sum_probs=29.3
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 86 SKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 86 ~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
.+|..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH
Confidence 3455555555555555555555555555555555555555555555555543
No 19
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.77 E-value=2.5e-20 Score=118.66 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=93.8
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
..+..+.+.+|.++..+.....+.+... +.+.+. .+..+.++||+|+ .|+.++++.|+..+++++ .+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~----------~~ 73 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNA-PNSYGRRPIQVMM-MGSARVAELLLLHGAEPN----------CA 73 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTC-CCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC----------CC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCC-CCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC----------Cc
Confidence 4467788899999988887665554432 333333 2346788999985 899999999998875443 57
Q ss_pred CCCCCc-HHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 88 SNLGWT-PLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 88 d~~g~t-~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|..|.| |||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 888998 999999999999999999999999999999999999999998764
No 20
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.77 E-value=2.3e-19 Score=115.60 Aligned_cols=114 Identities=20% Similarity=0.190 Sum_probs=92.9
Q ss_pred CCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCc
Q psy15728 14 GNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWT 93 (139)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t 93 (139)
.++++.++..+.......+..... ......+..+.++||+|+..|+.++++.|+..+++++ .+|..|.|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~t 71 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGD-NLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH----------ILAKERES 71 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCS-GGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----------CCCTTCCC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCc-ccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch----------hhcccCCC
Confidence 346777777777666555544332 2223345677899999999999999999999885443 57888999
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 94 PLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 94 ~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 116 (172)
T 3v30_A 72 ALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVK 116 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999998764
No 21
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.76 E-value=2.3e-19 Score=115.02 Aligned_cols=115 Identities=20% Similarity=0.202 Sum_probs=94.4
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLG 91 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g 91 (139)
.+.+++|.++..+.......+... +... ...+..+.++||+|+..|+.++++.|+..+++++ ..|..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g 69 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ----------LLGKGR 69 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----------CcCCCC
Confidence 356788888888877665554432 2222 2234567899999999999999999999885443 568889
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 116 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVK 116 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999998754
No 22
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.76 E-value=4.7e-20 Score=117.02 Aligned_cols=117 Identities=26% Similarity=0.243 Sum_probs=84.0
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
..+..|.+++|. +..+.....+.+.. .+.+.+. .+..+.++||+|+..|+.++++.|+..+++++ .+
T Consensus 31 ~~~~~g~t~L~~-~~~~~~~~v~~Ll~-~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~ 97 (156)
T 1bd8_A 31 ALNRFGKTALQV-MMFGSTAIALELLK-QGASPNV-QDTSGTSPVHDAARTGFLDTLKVLVEHGADVN----------VP 97 (156)
T ss_dssp CCCTTSCCHHHH-SCTTCHHHHHHHHH-TTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC----------CC
T ss_pred ccCCCCCcHHHH-HHcCCHHHHHHHHH-CCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC----------Cc
Confidence 345567777777 65555443333222 1222222 33466788999999999999888888774433 46
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|..|.||||+|+..++.+++++|++. ++++.+|..|.||||+|+..|+.+
T Consensus 98 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~ 147 (156)
T 1bd8_A 98 DGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQD 147 (156)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHH
T ss_pred CCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHH
Confidence 77888999999999999999988888 888888888999999998888754
No 23
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.76 E-value=4.5e-19 Score=119.04 Aligned_cols=131 Identities=18% Similarity=0.222 Sum_probs=98.7
Q ss_pred CccccCCCCcchhhhhhccCCCccCCCchhhHHhh----hcCHHHHHHHHHHHHHcCCHHHHHHHHHhccccccccc---
Q psy15728 7 RIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELN----QLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEIN--- 79 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~--- 79 (139)
..++..|.+++|.++..+..+..+.+... +.... ...+..+.++||+|+..|+.++++.|+..+++.+....
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 34467788999999988876554443332 22221 22345678999999999999999999999876553100
Q ss_pred ccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 80 LSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 80 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.....+..|..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHH
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChH
Confidence 00111234568999999999999999999999999999999999999999999988753
No 24
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=9.5e-19 Score=121.30 Aligned_cols=84 Identities=20% Similarity=0.288 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHc---CCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC
Q psy15728 45 VKEIHELFLYNCRN---GQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN 121 (139)
Q Consensus 45 ~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 121 (139)
...+.|+||+|+.. |+.++++.|+..+++++ .+|..|+||||+|+..|+.+++++|++.|++++.+|
T Consensus 166 ~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in----------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 235 (278)
T 1dcq_A 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD----------KQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN 235 (278)
T ss_dssp SSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT----------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred ccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc----------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 34578999999999 89999999999986544 578899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCcc
Q psy15728 122 DAGDTPLHKAAFVGREV 138 (139)
Q Consensus 122 ~~g~tpl~~A~~~g~~~ 138 (139)
..|+||||+|+..|+.+
T Consensus 236 ~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 236 ESGETPLDIAKRLKHEH 252 (278)
T ss_dssp TTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999999864
No 25
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.76 E-value=3.8e-19 Score=122.28 Aligned_cols=135 Identities=21% Similarity=0.178 Sum_probs=100.6
Q ss_pred ccCCccccCCCCcchhhhhhccCCCccCCCchhhHHhh------hcCHHHHHHHHHHHHHc---CCHHHHHHHHHhcccc
Q psy15728 4 KHGRIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELN------QLSVKEIHELFLYNCRN---GQLDKIKQLLDHCKEN 74 (139)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~ 74 (139)
...+..+..+.+.++.+++.+.....+.+......... ...+..+.|+||+|+.. |+.++++.|+..+++.
T Consensus 4 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 4 AGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp -------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred ccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 34455678889999999999998887776653221111 12356789999999986 9999999999998754
Q ss_pred ccc-ccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCC--------------CCCcHHHHHHHhCCcc
Q psy15728 75 NVE-INLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVND--------------AGDTPLHKAAFVGREV 138 (139)
Q Consensus 75 ~~~-~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~--------------~g~tpl~~A~~~g~~~ 138 (139)
+.. ..++......|..|.||||+|+..|+.+++++|++.|++++.++. .|+||||+|+..|+.+
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 310 011222224677899999999999999999999999999999987 7999999999998754
No 26
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.76 E-value=4.1e-18 Score=111.05 Aligned_cols=83 Identities=25% Similarity=0.336 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC-CC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN-DA 123 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~ 123 (139)
...+.++||+|+..|+.++++.|+. +.+++ .+|..|+||||+|+..++.+++++|++.|++++.++ ..
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 109 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD----------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG 109 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC----------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCC
Confidence 4578999999999999999999998 53322 578899999999999999999999999999999998 88
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 110 g~tpL~~A~~~~~~~ 124 (183)
T 3deo_A 110 GLTALHMAAGYVRPE 124 (183)
T ss_dssp SCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHhcCcHH
Confidence 999999999998864
No 27
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.76 E-value=3.5e-19 Score=116.69 Aligned_cols=118 Identities=25% Similarity=0.244 Sum_probs=96.2
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+.....+.+.. .+.+.+ ..+..+.++||+|+..|+.++++.|+..+++++ .+|
T Consensus 64 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 131 (192)
T 2rfm_A 64 KDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN----------DRN 131 (192)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS----------CCC
T ss_pred ccccCccHHHHHHHcCCHHHHHHHHH-CCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC----------CCC
Confidence 45678889999998877655443332 122222 234467899999999999999999999885443 578
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+
T Consensus 132 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 132 LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 89999999999999999999999999999999999999999999999864
No 28
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=7e-19 Score=122.03 Aligned_cols=124 Identities=19% Similarity=0.127 Sum_probs=77.1
Q ss_pred cCCccccCCCCcchhhhhhccCCCccCCCchhh---------HHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhccccc
Q psy15728 5 HGRIKFAPGGNRTHDQVRTRHSSSEEETPNSLS---------AELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENN 75 (139)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~ 75 (139)
+.+.....+.+.+|.++..+......++..... .......+..+.|+||+|+..|+.++++.|+..+.+.+
T Consensus 7 ~~~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~ 86 (285)
T 3d9h_A 7 HHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN 86 (285)
T ss_dssp -----------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred cccccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 345557889999999999998666555322111 11123345677899999999999999999999875433
Q ss_pred ccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 76 VEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 76 ~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.+|..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 87 ----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~ 139 (285)
T 3d9h_A 87 ----------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 139 (285)
T ss_dssp ----------EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred ----------CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHH
Confidence 56888999999999999999999999999999999999999999999988754
No 29
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=3.1e-19 Score=121.39 Aligned_cols=112 Identities=18% Similarity=0.207 Sum_probs=84.6
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC-CC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS-NL 90 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d-~~ 90 (139)
.|.+++|.++..+.....+.+.. +.+.+. .+..+.||||+|+..|+.++++.|+..+++++ .++ ..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------~~~~~~ 110 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLD----------HRDMRG 110 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCSSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----------cCCCCC
Confidence 45667788887777666555554 333333 33457888999999999999988888875443 344 66
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..++
T Consensus 111 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 111 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh
Confidence 8899999999999999999999999999888889999988886543
No 30
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.76 E-value=5.4e-19 Score=113.75 Aligned_cols=118 Identities=29% Similarity=0.333 Sum_probs=85.8
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..+.+.+|.++..+..+..+.+... +.+.+ ..+..+.++||+|+..|+.++++.|+..+++.+ .+|
T Consensus 43 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~ 110 (169)
T 2y1l_E 43 EDASGWTPLHLAAFNGHLEIVEVLLKN-GADVN-AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN----------AND 110 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CCC
Confidence 355677788888777665443333221 11222 223456788888888888888888888774333 467
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.+|..|.|||++|+..|+.+
T Consensus 111 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 78889999999999999999999889998888888999999988888753
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.76 E-value=7.3e-19 Score=119.80 Aligned_cols=118 Identities=18% Similarity=0.118 Sum_probs=90.2
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.++++.++..+.....+.+.. .+.+.+. .+..+.|+||+|+..|+.++++.|+..+++.+ .+|
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----------~~~ 187 (253)
T 1yyh_A 120 RMHDGTTPLILAARLAVEGMLEDLIN-SHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKD----------MQN 187 (253)
T ss_dssp CCTTCCCHHHHHHHHTCSSHHHHHHH-TTCCTTC-BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT----------CCC
T ss_pred cCCCCCcHHHHHHHcChHHHHHHHHH-cCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CcC
Confidence 34567777777777776554433332 2222222 23456889999999999999999998875443 568
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++++.+|..|+|||++|+..|+.+
T Consensus 188 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 188 NREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHH
Confidence 88999999999999999999999999999999999999999999998864
No 32
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.75 E-value=4.2e-19 Score=108.39 Aligned_cols=114 Identities=36% Similarity=0.469 Sum_probs=90.7
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
|.+.++.++..+..+..+.+... +.+.+ ..+..+.++||+|+..|+.++++.|+..+.+.+ .+|..|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~~g~ 69 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN----------AKDKNGR 69 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTSC
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-CCCCC-CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc----------ccCCCCC
Confidence 56677778777765544433321 22222 233467899999999999999999999875433 5788899
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
||||+|+..++.+++++|++.|++++.++..|.|||++|+..|+.+
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 115 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 115 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHH
Confidence 9999999999999999999999999999999999999999988754
No 33
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.75 E-value=2.2e-18 Score=117.38 Aligned_cols=124 Identities=17% Similarity=0.180 Sum_probs=93.2
Q ss_pred cccCCCCcchhhhhh---ccCCCccCCCchhhHHhhhcC----------HHHHHHHHHHHHHcCCHHHHHHHHHhccccc
Q psy15728 9 KFAPGGNRTHDQVRT---RHSSSEEETPNSLSAELNQLS----------VKEIHELFLYNCRNGQLDKIKQLLDHCKENN 75 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~ 75 (139)
.+..|.+++|.++.. +..+..+.+.. .+....... +..+.|+||+|+..|+.++++.|+..+++++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQ-IDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHH-HHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHh-cCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 467889999999988 77666554443 233332211 2468899999999999999999999986554
Q ss_pred ccccc---cccCccCCCCCCcHHHHHHHhCCHHHHHHHHh---CCCCCCcCCCCCCcHHHHHHH
Q psy15728 76 VEINL---SQKGESKSNLGWTPLHLASYFGHKSVVEFLLD---QGVDINAVNDAGDTPLHKAAF 133 (139)
Q Consensus 76 ~~~~~---~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~tpl~~A~~ 133 (139)
..-.. .......|..|.||||+|+..++.+++++|++ .|++++.+|..|+||||+|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHH
Confidence 21000 00000112239999999999999999999999 999999999999999999998
No 34
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.75 E-value=1.3e-18 Score=118.63 Aligned_cols=125 Identities=11% Similarity=0.138 Sum_probs=91.6
Q ss_pred cCCCCcchhhh---hhccCCCccCCCchhhHHhh----------hcCHHHHHHHHHHHHHcCCHHHHHHHHHhccccccc
Q psy15728 11 APGGNRTHDQV---RTRHSSSEEETPNSLSAELN----------QLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVE 77 (139)
Q Consensus 11 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~ 77 (139)
..|.+++|.++ +.+..+..+.+... +.... ...+..+.|+||+|+..|+.++++.|+..+++++..
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDI-AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHH-HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHh-cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 56889999988 55666554444332 11111 111236789999999999999999999998665531
Q ss_pred cc----ccccCccCCCCCCcHHHHHHHhCCHHHHHHHHh---CCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 78 IN----LSQKGESKSNLGWTPLHLASYFGHKSVVEFLLD---QGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 78 ~~----~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
-. ........+..|.||||+|+..|+.+++++|++ .|++++.+|..|+||||+|+..|+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhcc
Confidence 00 000000112679999999999999999999999 999999999999999999998765
No 35
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.75 E-value=3.8e-19 Score=121.16 Aligned_cols=126 Identities=19% Similarity=0.144 Sum_probs=97.1
Q ss_pred CCCcchhhhhhccCCCccCCCchh---hHHhhh---cCHHHHHHHHHHHHHc---CCHHHHHHHHHhcccccc-cccccc
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSL---SAELNQ---LSVKEIHELFLYNCRN---GQLDKIKQLLDHCKENNV-EINLSQ 82 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~-~~~~~~ 82 (139)
|.+++|.++..+..+..+.+...+ +.+.+. ..+..+.|+||+|+.. |+.++++.|+..+++.+. ...++.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 456788889888887666555432 222222 2456789999999999 999999999999876652 111222
Q ss_pred cCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC-------------CCcHHHHHHHhCCcc
Q psy15728 83 KGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA-------------GDTPLHKAAFVGREV 138 (139)
Q Consensus 83 ~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~-------------g~tpl~~A~~~g~~~ 138 (139)
....+|..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..|+.+
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~ 150 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWD 150 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHH
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 22235678999999999999999999999999999999887 999999999998754
No 36
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.75 E-value=3.5e-18 Score=115.29 Aligned_cols=81 Identities=28% Similarity=0.393 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCc
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDT 126 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~t 126 (139)
.+.++||+|+..|+.++++.|+..+++++ .+|..|.||||+|+..|+.+++++|++.|++++.+|..|+|
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t 89 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPS----------QPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWT 89 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCC----------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC
Confidence 44566666666666666666666553222 34555666666666666666666666666666666666666
Q ss_pred HHHHHHHhCCc
Q psy15728 127 PLHKAAFVGRE 137 (139)
Q Consensus 127 pl~~A~~~g~~ 137 (139)
|||+|+..|+.
T Consensus 90 pLh~A~~~g~~ 100 (229)
T 2vge_A 90 PLHCAASCNDT 100 (229)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCCH
Confidence 66666666554
No 37
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.75 E-value=3.7e-18 Score=116.28 Aligned_cols=119 Identities=23% Similarity=0.241 Sum_probs=59.0
Q ss_pred ccccCCCCcchhhhhhc-------------cCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccc
Q psy15728 8 IKFAPGGNRTHDQVRTR-------------HSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKEN 74 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~ 74 (139)
.++..|.+++|.++..+ .....+.+. ..+.......+..+.|+||+|+..|+.++++.|+..+++.
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll-~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 83 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFI-YQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA 83 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHH-HccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 45677888999988866 333333333 3344555555667889999999999999999999887554
Q ss_pred cccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCC-CCCcCCCCCCcHHHHHHHhCCc
Q psy15728 75 NVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV-DINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 75 ~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga-~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
+ .+|..|.||||+|+..++.+++++|++.|+ +++.++..|.||||+|+..|+.
T Consensus 84 ~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~ 137 (253)
T 1yyh_A 84 N----------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE 137 (253)
T ss_dssp T----------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS
T ss_pred C----------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH
Confidence 4 345556666666666666666666666654 5666666666666666665554
No 38
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.75 E-value=4.9e-20 Score=114.81 Aligned_cols=85 Identities=33% Similarity=0.491 Sum_probs=77.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC
Q psy15728 44 SVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA 123 (139)
Q Consensus 44 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 123 (139)
.+..+.++||+|+..|+.++++.|+..+++.+ .+|..|.||||+|+..++.+++++|++.|++++.++..
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~ 75 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPN----------VKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQ 75 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCC
Confidence 45567899999999999999999999885443 57888999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 76 g~t~L~~A~~~~~~~ 90 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVD 90 (137)
T ss_dssp GCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCCHH
Confidence 999999999998764
No 39
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=4.2e-19 Score=107.42 Aligned_cols=84 Identities=36% Similarity=0.538 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAG 124 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 124 (139)
+..+.++||+|+..|+.++++.|+..+++.+ .+|..|.||||+|+..++.+++++|++.|++++.+|..|
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g 75 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVN----------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS----------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC
Confidence 4466899999999999999999998874433 578889999999999999999999999999999999999
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 76 ~tpl~~A~~~~~~~ 89 (115)
T 2l6b_A 76 NTPEHLAKKNGHHE 89 (115)
T ss_dssp CCTTHHHHTTTCHH
T ss_pred CCHHHHHHHCCCHH
Confidence 99999999988754
No 40
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.75 E-value=5.4e-19 Score=122.19 Aligned_cols=84 Identities=26% Similarity=0.344 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHh-CCCCCCcCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLD-QGVDINAVNDA 123 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~-~ga~~~~~~~~ 123 (139)
+..+.|+||+|+..|+.++++.|+..+++++ .+|..|+||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n----------~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~ 249 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVN----------VQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRD 249 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----------CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCC
Confidence 3457899999999999999999999986544 578899999999999999999999999 89999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 250 g~TpL~~A~~~g~~~ 264 (276)
T 4hbd_A 250 GSTALMVALDAGQSE 264 (276)
T ss_dssp SCCHHHHHHHHTCHH
T ss_pred CCCHHHHHHHcCCHH
Confidence 999999999999864
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.74 E-value=2.3e-18 Score=115.96 Aligned_cols=88 Identities=28% Similarity=0.369 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCC-CCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVND-AGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~-~g~ 125 (139)
.+.++||+|+..|+.++++.|+..++....... .+..+..|.||||+|+..++.+++++|++.|++++.++. .|+
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 152 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSI----LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGR 152 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCG----GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHH----hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Confidence 344555555555555555555555433222111 225677888899999988999999999988999988887 889
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+.+
T Consensus 153 tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 153 TALHLAVDLQNPD 165 (236)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999998888754
No 42
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.74 E-value=7.7e-19 Score=111.36 Aligned_cols=112 Identities=17% Similarity=0.185 Sum_probs=88.1
Q ss_pred CcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcH
Q psy15728 15 NRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTP 94 (139)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~ 94 (139)
+.++.++..+..+..+.+..... ......+..+.++||+ +..|+.++++.|+..+++++ .+|..|.||
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~t~ 71 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHREL-VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN----------VQDTSGTSP 71 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTC-CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT----------CCCTTSCCH
T ss_pred hHHHHHHHhCCHHHHHHHHHhhC-cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC----------CcCCCCCCH
Confidence 34556666666555444433311 1122234567899999 99999999999999885443 578889999
Q ss_pred HHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 95 LHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 95 l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 115 (156)
T 1bd8_A 72 VHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTA 115 (156)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHH
Confidence 99999999999999999999999999999999999999998764
No 43
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.74 E-value=3.3e-18 Score=108.29 Aligned_cols=84 Identities=26% Similarity=0.318 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAG 124 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 124 (139)
+..+.++||+|+..|+.++++.|+..+.+.+ .+|..|.||||+|+..++.+++++|++.|++++.+|..|
T Consensus 31 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 100 (153)
T 1awc_B 31 DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD----------ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK 100 (153)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT----------CCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCC
Confidence 4467899999999999999999998875433 578889999999999999999999999999999999999
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 101 ~t~L~~A~~~~~~~ 114 (153)
T 1awc_B 101 MTALHWATEHNHQE 114 (153)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 99999999998754
No 44
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.74 E-value=6.5e-19 Score=112.25 Aligned_cols=117 Identities=26% Similarity=0.296 Sum_probs=85.4
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..+.+++|.++. +.....+.+.. .+.+.+ ..+..+.++||+|+..|+.++++.|+..+.+++ .+|
T Consensus 34 ~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~ 100 (162)
T 1ihb_A 34 QNGFGRTALQVMKL-GNPEIARRLLL-RGANPD-LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN----------IED 100 (162)
T ss_dssp CCTTSCCHHHHCCS-SCHHHHHHHHH-TTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCC
T ss_pred cCccCccHHHHHHc-CcHHHHHHHHH-cCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CcC
Confidence 34566677777655 44333222221 112222 223466889999999999999999998874433 578
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCC-CCcCCCCCCcHHHHHHHhCCcc
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVD-INAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~-~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|.||||+|+..++.+++++|++.|++ ++.++..|+||||+|+..|+.+
T Consensus 101 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 101 NEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 8899999999999999999999999998 5889999999999999988754
No 45
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.74 E-value=1.6e-18 Score=119.07 Aligned_cols=84 Identities=29% Similarity=0.298 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC-CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN-LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA 123 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 123 (139)
...+.++||+|+..|+.++++.|+..+++++ ..+. .|.||||+|+..++.+++++|++.|++++.+|..
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 224 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLN----------KPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYG 224 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT----------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC----------CCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccC
Confidence 3466789999999999999999998885544 3443 4999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 225 g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 225 GRTPLGSALLRPNPI 239 (282)
T ss_dssp SCCHHHHHHTSSCHH
T ss_pred CCCHHHHHHHcCCcH
Confidence 999999999888754
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.74 E-value=8.7e-19 Score=117.16 Aligned_cols=81 Identities=21% Similarity=0.248 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCC-CCCCcCCCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQG-VDINAVNDAGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~g-a~~~~~~~~g~ 125 (139)
.+.++||+|+..|+.++++.|+..+.+.+ .+|..|.||||+|+..++.+++++|++.| ++++.+|..|+
T Consensus 106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~ 175 (228)
T 2dzn_A 106 QGVTCLHLAVGKKWFEVSQFLIENGASVR----------IKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW 175 (228)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCSC----------CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred CCCCHHHHHHHcCCHhHHHHHHHcCCCcc----------ccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCC
Confidence 44566666666666666666666553222 45666777777777777777777777777 77777777777
Q ss_pred cHHHHHHHhCCc
Q psy15728 126 TPLHKAAFVGRE 137 (139)
Q Consensus 126 tpl~~A~~~g~~ 137 (139)
||||+|+..|+.
T Consensus 176 t~L~~A~~~~~~ 187 (228)
T 2dzn_A 176 TPLFHALAEGHG 187 (228)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCCH
Confidence 777777776664
No 47
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=8.5e-18 Score=114.29 Aligned_cols=82 Identities=24% Similarity=0.326 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC-CCC
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN-DAG 124 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~g 124 (139)
..+.|+||+|+..|+.++++.|+. +.+++ .+|..|.||||+|+..|+.+++++|++.|++++.++ ..|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~----------~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g 111 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVD----------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGG 111 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTT----------CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCC----------CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCC
Confidence 478999999999999999999998 63332 578889999999999999999999999999999998 789
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 112 ~t~L~~A~~~g~~~ 125 (244)
T 3ui2_A 112 LTALHMAAGYVRPE 125 (244)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 99999999999864
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.74 E-value=2.3e-18 Score=115.96 Aligned_cols=81 Identities=25% Similarity=0.285 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC-CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN-LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~-~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
.+.++||+|+..|+.++++.|+..+++++ .++. .|.||||+|+..++.+++++|++.|++++.++..|.
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 185 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVN----------AQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTT----------CCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCC
Confidence 45556666666666666666665553332 2343 556666666666666666666666666666666666
Q ss_pred cHHHHHHHhCCc
Q psy15728 126 TPLHKAAFVGRE 137 (139)
Q Consensus 126 tpl~~A~~~g~~ 137 (139)
||||+|+..|+.
T Consensus 186 tpl~~A~~~~~~ 197 (236)
T 1ikn_D 186 SPYQLTWGRPST 197 (236)
T ss_dssp CGGGGCTTSSCH
T ss_pred CHHHHHHccCch
Confidence 666666555543
No 49
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.73 E-value=5.2e-19 Score=123.89 Aligned_cols=84 Identities=19% Similarity=0.249 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHc---CCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC
Q psy15728 45 VKEIHELFLYNCRN---GQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN 121 (139)
Q Consensus 45 ~~~~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 121 (139)
...+.|+||+|+.. |+.++++.||..+++++ .+|..|.||||+|+..|+.+++++|++.|++++.+|
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn----------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 256 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD----------AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVN 256 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT----------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCC
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC----------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 45678999999987 89999999999985443 578899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCcc
Q psy15728 122 DAGDTPLHKAAFVGREV 138 (139)
Q Consensus 122 ~~g~tpl~~A~~~g~~~ 138 (139)
..|+||||+|+..|+.+
T Consensus 257 ~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 257 EAGETALDIARKKHHKE 273 (301)
T ss_dssp TTSCCHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999998864
No 50
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.73 E-value=6.9e-18 Score=103.23 Aligned_cols=111 Identities=21% Similarity=0.217 Sum_probs=86.8
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLG 91 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g 91 (139)
.+.+.++.++..+..+..+.+.. .+.+.+ ..+..+.++||+|+..|+.++++.|+..+++++ .+|..|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~d~~g 73 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVA-KGEDVN-RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN----------APDKHH 73 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHH-TTCCTT-SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT----------CCCTTS
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCcC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCC
Confidence 44566777777776554443332 122222 234467899999999999999999998875443 578899
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHh
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFV 134 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 134 (139)
+||||+|+..++.+++++|++.|++++.+|..|+||||+|...
T Consensus 74 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 74 ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999999999999999999999999999998543
No 51
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.73 E-value=6.9e-19 Score=109.56 Aligned_cols=82 Identities=26% Similarity=0.367 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC-C
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA-G 124 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~-g 124 (139)
..+.++||+|+..|+.++++.|+..+++++ .+|..|.||||+|+. ++.+++++|++.|++++.++.. |
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g 78 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLEAGADPN----------ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATL 78 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTT
T ss_pred CCCccHHHHHHHcCCHHHHHHHHHcCCCcC----------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCC
Confidence 456799999999999999999999885433 578889999999999 9999999999999999999999 9
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 79 ~t~L~~A~~~~~~~ 92 (136)
T 1d9s_A 79 TRPVHDAAREGFLD 92 (136)
T ss_dssp BCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 99999999998764
No 52
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.73 E-value=4.1e-18 Score=117.54 Aligned_cols=119 Identities=22% Similarity=0.178 Sum_probs=80.4
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
+..+.++++.++..+.....-......+.+++. .+..+.||||+|+..|+.++++.|+..+++.+ .++.
T Consensus 49 ~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~----------~~~~ 117 (269)
T 4b93_B 49 DPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNV-TSQDGSSPLHVAALHGRADLIPLLLKHGANAG----------ARNA 117 (269)
T ss_dssp --------------------------CCCCTTC-CCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTT----------CCCT
T ss_pred CccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcC----------ccCC
Confidence 344556677776655543322223333333333 34567899999999999999999999885443 5788
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCccC
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREVG 139 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~c 139 (139)
.|.||+|+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 118 ~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 118 DQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGG
T ss_pred CCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 89999999999999999999999999999999999999999999998753
No 53
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.73 E-value=1.8e-18 Score=116.09 Aligned_cols=120 Identities=20% Similarity=0.148 Sum_probs=95.0
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
|.+++|.++..+.....+.+....+.+.+. .+..+.|+||+|+..|+.++++.|+..+++... ...+..|..|.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~~~g~ 76 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQ-RGAMGETALHIAALYDNLEAAMVLMEAAPELVF-----EPMTSELYEGQ 76 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-----CCCCSTTTTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcc-----ccccccCCCCc
Confidence 567888888888766655554433333333 345778999999999999999999999865421 11125688899
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCCC-------------CCCcHHHHHHHhCCcc
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVDINAVND-------------AGDTPLHKAAFVGREV 138 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~-------------~g~tpl~~A~~~g~~~ 138 (139)
||||+|+..++.+++++|++.|++++.++. .|+||||+|+..|+.+
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 135 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEE 135 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999998876 7999999999998754
No 54
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.73 E-value=1.4e-18 Score=114.16 Aligned_cols=82 Identities=21% Similarity=0.364 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhc-ccccccccccccCccCCCCCCcHHHHHHHhCC-----HHHHHHHHhCCCCCCcC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHC-KENNVEINLSQKGESKSNLGWTPLHLASYFGH-----KSVVEFLLDQGVDINAV 120 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~-----~~~~~~Ll~~ga~~~~~ 120 (139)
.+.++||+|+..|+.++++.|+..+ .+. +.+|..|.||||+|+..+. .+++++|++.|++++.+
T Consensus 105 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 105 YGGNALIPAAEKGHIDNVKLLLEDGREDI----------DFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp TSCCSHHHHHHTTCHHHHHHHHHHCCCCT----------TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc----------CCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 4456677777777777777776665 222 2567778888888888877 78888888888888888
Q ss_pred CCCCCcHHHHHHHhCCcc
Q psy15728 121 NDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 121 ~~~g~tpl~~A~~~g~~~ 138 (139)
|..|+||||+|+..|+.+
T Consensus 175 ~~~g~t~l~~A~~~~~~~ 192 (201)
T 3hra_A 175 DNSGRTAMDYANQKGYTE 192 (201)
T ss_dssp CTTSCCHHHHHHHHTCHH
T ss_pred CCCCCCHHHHHHHcCCHh
Confidence 888888888888877653
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.73 E-value=5.9e-19 Score=122.45 Aligned_cols=118 Identities=15% Similarity=0.054 Sum_probs=92.6
Q ss_pred CccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCcc
Q psy15728 7 RIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGES 86 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~ 86 (139)
..++..|.+++|.++..+..+..+.+... +.+.+.. ++.|+||+|+..|+.++++.|+..+++++ .
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------~ 90 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDDS----------Q 90 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCTT----------C
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------C
Confidence 34567788889999888876665444432 3333333 47889999999999999999998875443 5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCC-CcHHHHHHHhCCcc
Q psy15728 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAG-DTPLHKAAFVGREV 138 (139)
Q Consensus 87 ~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g-~tpl~~A~~~g~~~ 138 (139)
+|..|.||||+|+..++.+++++|++.|++++.++..| .||||+|+..|+.+
T Consensus 91 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~ 143 (285)
T 3kea_A 91 FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVS 143 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHH
Confidence 67889999999999999999999999999999999988 79999999888753
No 56
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.72 E-value=5.7e-18 Score=116.38 Aligned_cols=127 Identities=20% Similarity=0.212 Sum_probs=93.0
Q ss_pred cccCCCCcchhhhhh---ccCCCccCCCchhhHH-------hhh---cCHHHHHHHHHHHHHcCCHHHHHHHHHhccccc
Q psy15728 9 KFAPGGNRTHDQVRT---RHSSSEEETPNSLSAE-------LNQ---LSVKEIHELFLYNCRNGQLDKIKQLLDHCKENN 75 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~ 75 (139)
.+..|.+++|.++.. +..+..+.+... +.. .+. ..+..+.|+||+|+..|+.++++.|+..+++++
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 367889999999965 554443333322 221 111 123468899999999999999999999986655
Q ss_pred ccccc----cccCccCCCCCCcHHHHHHHhCCHHHHHHHHh---CCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 76 VEINL----SQKGESKSNLGWTPLHLASYFGHKSVVEFLLD---QGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 76 ~~~~~----~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
..-.. .......+..|.||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccC
Confidence 31100 00001123479999999999999999999999 999999999999999999999876
No 57
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.72 E-value=1.3e-18 Score=118.68 Aligned_cols=126 Identities=22% Similarity=0.169 Sum_probs=96.9
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCH------HHHHHHHHHHH---HcCCHHHHHHHHHhcccccccc-cccc
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSV------KEIHELFLYNC---RNGQLDKIKQLLDHCKENNVEI-NLSQ 82 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~a~---~~g~~~~~~~ll~~~~~~~~~~-~~~~ 82 (139)
+.+.++.+++.+.....+.+...+......... ..+.|+||+|+ ..|+.++++.|+..+++.+... .++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 456788899988888777766643332233322 44889999999 7799999999999987643210 0112
Q ss_pred cCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC--------------CCCCcHHHHHHHhCCcc
Q psy15728 83 KGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN--------------DAGDTPLHKAAFVGREV 138 (139)
Q Consensus 83 ~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~--------------~~g~tpl~~A~~~g~~~ 138 (139)
.....|..|+||||+|+..|+.+++++|++.|++++.++ ..|+||||+|+..|+.+
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 154 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH 154 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHH
Confidence 222556789999999999999999999999999999998 68999999999999864
No 58
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.72 E-value=7.6e-18 Score=112.64 Aligned_cols=82 Identities=33% Similarity=0.442 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCCCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ-GVDINAVNDAGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~-ga~~~~~~~~g~ 125 (139)
.+.++||+|+..|+.++++.|+..+.+++ .+|..|.||||+|+..++.+++++|++. |++++.+|..|+
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVN----------GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSC
T ss_pred ccccccccccccCcHHHHHHHHhCCCCcc----------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCC
Confidence 45789999999999999999999875433 5788899999999999999999999998 999999999999
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+.+
T Consensus 142 tpL~~A~~~~~~~ 154 (222)
T 3ehr_A 142 TALHAAAWKGYAD 154 (222)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999998864
No 59
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.72 E-value=2.6e-18 Score=114.59 Aligned_cols=49 Identities=24% Similarity=0.183 Sum_probs=21.8
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
|..|.||||+|+..++.+++++|++.|++++.++..|.|||++|+..|+
T Consensus 155 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 3344444444444444444444444444444444444444444444443
No 60
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.72 E-value=1.1e-18 Score=124.28 Aligned_cols=123 Identities=14% Similarity=0.117 Sum_probs=97.8
Q ss_pred cccCCCCcchhhhhhc--cCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCcc
Q psy15728 9 KFAPGGNRTHDQVRTR--HSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGES 86 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~ 86 (139)
.+..+.++++.++..+ ..+..+.+... +.+.+. .+..+.|+||+|+..|+.++++.|+..+++... ++ .+.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~----~~~ 206 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTA-KDKADETPLMRAMEFRNREALDLMMDTVPSKSS-LR----LDY 206 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS-CC----TTC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHhccccccc-cc----ccc
Confidence 5667899999999888 44443333322 333332 345678999999999999999999999865211 11 226
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 87 ~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~ 258 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVL 258 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHH
Confidence 7889999999999999999999999999999999999999999999999864
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.72 E-value=6.1e-18 Score=116.89 Aligned_cols=98 Identities=26% Similarity=0.292 Sum_probs=77.4
Q ss_pred hhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcc-ccccccc----------------------------ccccCccCCCCC
Q psy15728 41 NQLSVKEIHELFLYNCRNGQLDKIKQLLDHCK-ENNVEIN----------------------------LSQKGESKSNLG 91 (139)
Q Consensus 41 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~-~~~~~~~----------------------------~~~~~~~~d~~g 91 (139)
....+..+.|+||+|+..|+.++++.|+..++ +.+..-. .....+..+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 34455677888888888888888888888876 3332100 001123467789
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~ 230 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKE 230 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999864
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.72 E-value=1.2e-18 Score=118.02 Aligned_cols=116 Identities=19% Similarity=0.158 Sum_probs=91.5
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLG 91 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g 91 (139)
.+.+.++.++..+..+..+.+... +.+.+ ..+..+.|+||+|+..|+.++++.|+..+++++ .+|..|
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------~~d~~g 103 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYE-VDDPS-LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN----------AADSDG 103 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTST-TSSCC-CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT----------CCCTTC
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHc-CCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------ccCCCC
Confidence 345667778877776555544432 22222 234567899999999999999999999885443 578899
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC-cHHHHH--HHhCCccC
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD-TPLHKA--AFVGREVG 139 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~-tpl~~A--~~~g~~~c 139 (139)
+||||+|+..++.+++++|++.|++++.++..|. ||||+| +..|+.+|
T Consensus 104 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~ 154 (239)
T 1ycs_B 104 WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQC 154 (239)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHH
Confidence 9999999999999999999999999999998877 999999 66777653
No 63
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.72 E-value=1.7e-17 Score=101.16 Aligned_cols=81 Identities=42% Similarity=0.580 Sum_probs=73.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcH
Q psy15728 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTP 127 (139)
Q Consensus 48 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tp 127 (139)
+.++||+|+..|+.++++.|+..+.+.+ ..|..|.||||+|+..++.+++++|++.|++++.++..|.||
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 71 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN----------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP 71 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCC----------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcH
Confidence 4689999999999999999999875433 578889999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcc
Q psy15728 128 LHKAAFVGREV 138 (139)
Q Consensus 128 l~~A~~~g~~~ 138 (139)
||+|+..|+.+
T Consensus 72 l~~A~~~~~~~ 82 (126)
T 1n0r_A 72 LHLAARNGHLE 82 (126)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHcChHH
Confidence 99999998753
No 64
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.72 E-value=4.1e-18 Score=113.61 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=97.8
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
..+..+.++++.++..+..+..+.+...... ........+.++||+|+..|+.++++.|+..+++.+ ..
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~ 121 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRNRAT-DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN----------AV 121 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CB
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc----------Cc
Confidence 4467788999999988876655444332211 222334567899999999999999999999885443 57
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 888999999999999999999999999999999999999999999998764
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.72 E-value=4.4e-17 Score=104.76 Aligned_cols=116 Identities=30% Similarity=0.429 Sum_probs=91.4
Q ss_pred cCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCC
Q psy15728 11 APGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNL 90 (139)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~ 90 (139)
..+.+.++.+++.+..+..+.+... +.+.+. .+..+.++||+|+..|+.++++.|+..+++.+ ..|..
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~ 79 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMAN-GADVNA-EDASGWTPLHLAAFNGHLEIVEVLLKNGADVN----------AVDHA 79 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHC-CCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------ccCCC
Confidence 3445567778877777665554432 333332 34567899999999999999999998874433 56888
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 80 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 127 (169)
T 2y1l_E 80 GMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLE 127 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999988754
No 66
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.72 E-value=2.7e-18 Score=114.78 Aligned_cols=122 Identities=25% Similarity=0.266 Sum_probs=92.0
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchh-hHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSL-SAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
.+..|.+++|.++..+..+..+.+.... ..+........+.++||+|+..|+.++++.|+..+.... .+..
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--------~~~~ 103 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD--------LNKI 103 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC--------TTCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc--------cccC
Confidence 4667788888888877655443333221 122222244567889999999999999999988762111 1156
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
+..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 104 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 888999999999999999999999999999999999999999999988753
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.71 E-value=2.1e-17 Score=113.08 Aligned_cols=80 Identities=26% Similarity=0.280 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcH
Q psy15728 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTP 127 (139)
Q Consensus 48 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tp 127 (139)
+.|+||+|+..|+.++++.|+..+.+.+ .+|..|.||||+|+..|+.+++++|++.|++++.++..|+||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~ 72 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVN----------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 72 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSS----------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCC----------CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 4567777777777777777776653322 456667777777777777777777777777777777777777
Q ss_pred HHHHHHhCCc
Q psy15728 128 LHKAAFVGRE 137 (139)
Q Consensus 128 l~~A~~~g~~ 137 (139)
||+|+..|+.
T Consensus 73 L~~A~~~~~~ 82 (261)
T 2xai_A 73 LFNACVSGSW 82 (261)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCCH
Confidence 7777766654
No 68
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.71 E-value=3.6e-18 Score=120.30 Aligned_cols=116 Identities=24% Similarity=0.275 Sum_probs=92.7
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLG 91 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g 91 (139)
.+.+.++.+++.+.......+....+...+. .+..+.|+||+|+..|+.++++.|+..+++++ .+|..|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g 91 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHA-SDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH----------AKDKGG 91 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCC-SSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTC
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------ccCCCC
Confidence 3455677788777776655555443333332 34467899999999999999999999885443 578889
Q ss_pred CcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 92 ~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 138 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVE 138 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999988754
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.71 E-value=5.3e-19 Score=114.67 Aligned_cols=118 Identities=25% Similarity=0.271 Sum_probs=95.0
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
..+..|.+++|.++..+.....+.+... +.+.+. .+..+.++||+|+..|+.++++.|+..+++.+ .+
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~ 101 (179)
T 3f6q_A 34 QGDDHGFSPLHWACREGRSAVVEMLIMR-GARINV-MNRGDDTPLHLAASHGHRDIVQKLLQYKADIN----------AV 101 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CC
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------cc
Confidence 4467788899999988876554433322 222222 33467899999999999999999999885443 57
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
|..|.||||+|+..++.+++++|++.|++++.+|..|+|||++|+..++.
T Consensus 102 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 102 NEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999876543
No 70
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.71 E-value=1.2e-17 Score=123.95 Aligned_cols=84 Identities=19% Similarity=0.261 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHH---cCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC
Q psy15728 45 VKEIHELFLYNCR---NGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN 121 (139)
Q Consensus 45 ~~~~~~~l~~a~~---~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 121 (139)
+..+.|+||+|+. .|+.++++.||..|++++ .+|..|+||||+|+..|+.+++++|+++||+++.+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn----------~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 237 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD----------AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVN 237 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT----------CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCC
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCC----------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 4467899999966 999999999999986544 578899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCcc
Q psy15728 122 DAGDTPLHKAAFVGREV 138 (139)
Q Consensus 122 ~~g~tpl~~A~~~g~~~ 138 (139)
..|+||||+|+..|+.+
T Consensus 238 ~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 238 EAGETALDIARKKHHKE 254 (497)
T ss_dssp TTCCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999999865
No 71
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.71 E-value=2.8e-18 Score=117.83 Aligned_cols=117 Identities=14% Similarity=0.051 Sum_probs=84.5
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
.++..|.+++|.++..+.....+.+. ..+.+.+......+.||||+|+..|+.++++.|+..+++++ .+
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~----------~~ 221 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT----------AR 221 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CC
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc----------cc
Confidence 34667889999999888765544333 33444555454568899999999999999999999985443 57
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhC
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVG 135 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g 135 (139)
|..|.||||+|+..++.+++++|+++|++++.++..|.|||++|....
T Consensus 222 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 222 MYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--------------
T ss_pred ccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence 889999999999999999999999999999999999999999997654
No 72
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.71 E-value=6.9e-18 Score=113.07 Aligned_cols=80 Identities=25% Similarity=0.310 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCc
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDT 126 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~t 126 (139)
.+.++||+|+..|+.++++.|+..+++.+ .+|..|.||||+|+..++.+++++|++.|++++.++..|.|
T Consensus 72 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 141 (231)
T 3aji_A 72 AGWSPLHIAASAGXDEIVKALLVKGAHVN----------AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT 141 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHcCCCCC----------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 34455555555555555555555442221 34455555555555555555555555555555555555555
Q ss_pred HHHHHHHhCC
Q psy15728 127 PLHKAAFVGR 136 (139)
Q Consensus 127 pl~~A~~~g~ 136 (139)
|||+|+..|+
T Consensus 142 ~L~~A~~~~~ 151 (231)
T 3aji_A 142 AMHRAAAKGN 151 (231)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 5555555554
No 73
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.71 E-value=4e-19 Score=118.90 Aligned_cols=115 Identities=22% Similarity=0.250 Sum_probs=92.3
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHh-cccccccccccccCccCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDH-CKENNVEINLSQKGESKS 88 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~-~~~~~~~~~~~~~~~~~d 88 (139)
...+.+.+|.++..+.....+.+.. .+.+.+. .+..+.|+||+|+..|+.++++.|+.. +.+.+ .+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~----------~~d 137 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLD-NRVGVNG-LDKAGSTALYWACHGGHKDIVEMLFTQPNIELN----------QQN 137 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHH-TTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC----------CCC
T ss_pred ccccccccccccccCcHHHHHHHHh-CCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc----------ccC
Confidence 3456788888888887655444432 2223332 345678999999999999999999987 63332 578
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH
Confidence 999999999999999999999999999999999999999999987654
No 74
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.70 E-value=2.2e-18 Score=113.06 Aligned_cols=109 Identities=12% Similarity=0.016 Sum_probs=80.0
Q ss_pred CCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCH----HHHHHHHHhcccccccccccccCccCCC
Q psy15728 14 GNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQL----DKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~----~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
...++.+++.+....... ......+...+..+.||||+|+..|+. ++++.||..|++++ .+|.
T Consensus 7 ~~~l~~Aa~~g~~~~~~~---l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn----------~~d~ 73 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLE---LFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK----------SRTK 73 (186)
T ss_dssp CSSHHHHHHHSCHHHHHH---HHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS----------CCCT
T ss_pred ccHHHHHHHcCCHHHHHH---HHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC----------CCCC
Confidence 345677777766544222 222223333335678999999999875 48888998885554 5788
Q ss_pred CCCcHHHHHHHhCC------HHHHHHHHhCCCCCCcCCCCCC-cHHHHHHHhC
Q psy15728 90 LGWTPLHLASYFGH------KSVVEFLLDQGVDINAVNDAGD-TPLHKAAFVG 135 (139)
Q Consensus 90 ~g~t~l~~a~~~~~------~~~~~~Ll~~ga~~~~~~~~g~-tpl~~A~~~g 135 (139)
.|+||||+|+..++ .+++++|++.||+++.+|..|+ ||||+|+..+
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCC
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcC
Confidence 89999999998887 5788999999999999998898 8999888744
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.70 E-value=1.2e-17 Score=106.31 Aligned_cols=113 Identities=19% Similarity=0.186 Sum_probs=88.9
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
..+.++.++..+..+..+.+... +.+.+ ..+..+.++||+|+. |+.++++.|+..+.+++ .+|..|.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~----------~~~~~g~ 71 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQN-NVNVN-AQNGFGRTALQVMKL-GNPEIARRLLLRGANPD----------LKDRTGF 71 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTS-CCCTT-CCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT----------CCCTTSC
T ss_pred HhhHHHHHHHcCCHHHHHHHHhC-CCCcc-ccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC----------CCCCCCC
Confidence 34456667766665554444431 22222 234467899999999 99999999999875443 5788899
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+.+
T Consensus 72 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 117 (162)
T 1ihb_A 72 AVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLR 117 (162)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999998754
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.70 E-value=4.5e-18 Score=120.13 Aligned_cols=127 Identities=22% Similarity=0.121 Sum_probs=90.4
Q ss_pred ccccCCCCcchhhhhhcc---CCCccCCCchhhHHhhhcCHHHHHHHHHHHHH----cCCHHHHHHHHHhcccc------
Q psy15728 8 IKFAPGGNRTHDQVRTRH---SSSEEETPNSLSAELNQLSVKEIHELFLYNCR----NGQLDKIKQLLDHCKEN------ 74 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~----~g~~~~~~~ll~~~~~~------ 74 (139)
.++..|.+++|.++..+. ......+........+ ..+..+.||||+|+. .|+.++++.|++.+...
T Consensus 159 ~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~ 237 (327)
T 1sw6_A 159 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237 (327)
T ss_dssp BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG
T ss_pred CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc
Confidence 345667778888887655 3333333333322222 334567899999998 89999999998875311
Q ss_pred ----------ccccccc-------------------ccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 75 ----------NVEINLS-------------------QKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 75 ----------~~~~~~~-------------------~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
+++++.. ...+.+|..|+||||+|+..|+.+++++|++.||+++.+|..|+
T Consensus 238 ~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 238 RPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL 317 (327)
T ss_dssp CCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 0000000 02447899999999999999999999999999999999999999
Q ss_pred cHHHHHHHhC
Q psy15728 126 TPLHKAAFVG 135 (139)
Q Consensus 126 tpl~~A~~~g 135 (139)
||||+|+..|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999998765
No 77
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.70 E-value=7.1e-17 Score=111.88 Aligned_cols=84 Identities=30% Similarity=0.428 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAG 124 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 124 (139)
...+.++||.|+..|+.++++.|+..+++++ ..|..|.||||+|+..|+.+++++|++.|++++.++..|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g 106 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADIN----------YANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTT----------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 3466899999999999999999999885443 568889999999999999999999999999999999999
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 107 ~tpL~~A~~~g~~~ 120 (299)
T 1s70_B 107 WIPLHAAASCGYLD 120 (299)
T ss_dssp CCHHHHHHHHTCHH
T ss_pred CcHHHHHHHcCCHH
Confidence 99999999998754
No 78
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.70 E-value=9.7e-18 Score=112.81 Aligned_cols=81 Identities=22% Similarity=0.263 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC-CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS-NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
.+.++||+|+..|+.++++.|+..+.+.+ ..+ ..|.||||+|+..++.+++++|++.|++++.++..|+
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGADID----------AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGS 184 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcc----------cccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 34555666666666666666655553222 234 5577777777777777777777777777777777777
Q ss_pred cHHHHHHHhCCc
Q psy15728 126 TPLHKAAFVGRE 137 (139)
Q Consensus 126 tpl~~A~~~g~~ 137 (139)
||||+|+..|+.
T Consensus 185 t~L~~A~~~~~~ 196 (241)
T 1k1a_A 185 SALHSASGRGLL 196 (241)
T ss_dssp BHHHHHHHHTCH
T ss_pred CHHHHHHHcCCH
Confidence 777777776654
No 79
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.70 E-value=1.1e-17 Score=112.42 Aligned_cols=80 Identities=31% Similarity=0.388 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCc
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDT 126 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~t 126 (139)
.+.++||+|+..|+.++++.|+..+++.+ .+|..|.||||+|+..++.+++++|++.|++++.+|..|.|
T Consensus 110 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 179 (237)
T 3b7b_A 110 GGWTPMIWATEYKHVDLVKLLLSKGSDIN----------IRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS 179 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 34455555555555555555555543222 34444555555555555555555555555555555555555
Q ss_pred HHHHHHHhCC
Q psy15728 127 PLHKAAFVGR 136 (139)
Q Consensus 127 pl~~A~~~g~ 136 (139)
|||+|+..|+
T Consensus 180 ~L~~A~~~~~ 189 (237)
T 3b7b_A 180 PLHIAARENR 189 (237)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 5555555544
No 80
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.69 E-value=7.9e-17 Score=102.96 Aligned_cols=86 Identities=30% Similarity=0.458 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC
Q psy15728 44 SVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA 123 (139)
Q Consensus 44 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 123 (139)
....+.++||.|+..|+.+.++.|+..+. .+.. ..+..|.||||+|+..++.+++++|++.|++++.++..
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 74 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS-----VNCR----DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 74 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTCC----CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC-----CCcc----ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC
Confidence 45578999999999999999999997653 2222 56788999999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 75 g~t~L~~A~~~~~~~ 89 (165)
T 3twr_A 75 GLVPLHNACSYGHYE 89 (165)
T ss_dssp SCCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCcHH
Confidence 999999999998764
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.69 E-value=7.2e-18 Score=107.20 Aligned_cols=83 Identities=24% Similarity=0.391 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCC
Q psy15728 45 VKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAG 124 (139)
Q Consensus 45 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 124 (139)
...+.++||+|+..|+.++++.|+..+.+.+ .+|..|.||||+|+ .++.+++++|++.|++++.++..|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g 77 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPN----------APNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT 77 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTT----------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCC----------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC
Confidence 4456899999999999999999999875433 57888999999985 899999999999999999999999
Q ss_pred Cc-HHHHHHHhCCcc
Q psy15728 125 DT-PLHKAAFVGREV 138 (139)
Q Consensus 125 ~t-pl~~A~~~g~~~ 138 (139)
+| |||+|+..|+.+
T Consensus 78 ~ttpL~~A~~~~~~~ 92 (156)
T 1bi7_B 78 LTRPVHDAAREGFLD 92 (156)
T ss_dssp CCCHHHHHHHHTCHH
T ss_pred CcHHHHHHHHCCCHH
Confidence 99 999999998864
No 82
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.69 E-value=4.3e-17 Score=117.03 Aligned_cols=83 Identities=23% Similarity=0.336 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
..+.|+||+|+..|+.++++.||..+++++ ..|..|+||||+|+..++.+++++|++.|++++.+|..|.
T Consensus 233 ~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn----------~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~ 302 (368)
T 3jue_A 233 QDNATPLIQATAANSLLACEFLLQNGANVN----------QADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGR 302 (368)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----------CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCC
Confidence 456778888888888888888887764333 4677888888888888888888888888888888888888
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+..
T Consensus 303 TpL~~A~~~g~~~ 315 (368)
T 3jue_A 303 DPLTIAMETANAD 315 (368)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHCCCHH
Confidence 8888888887754
No 83
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.69 E-value=1.8e-17 Score=110.96 Aligned_cols=116 Identities=20% Similarity=0.155 Sum_probs=67.2
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
+..+.+++|.++..+..+..+.+.. .+.+.+ ..+..+.++||+|+..|+.++++.|+..+.+.+ .+|.
T Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~~~ 137 (231)
T 3aji_A 70 DDAGWSPLHIAASAGXDEIVKALLV-KGAHVN-AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD----------AKDH 137 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCT
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHH-cCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------CcCC
Confidence 4455566666666554433222211 111111 122345677777777777777777776664332 3455
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
.|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH
Confidence 666666666666666666666666666666666666666666666654
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.68 E-value=1.3e-18 Score=117.36 Aligned_cols=116 Identities=19% Similarity=0.149 Sum_probs=92.1
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
...+.+.++.++..+..+..+.+.. .+.+.+. .+..+.|+||+|+..|+.++++.|+..+++++ .+|.
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n----------~~d~ 85 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQ-PNEEGITALHNAICGANYSIVDFLITAGANVN----------SPDS 85 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCT
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHh-cCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------CCCC
Confidence 3445556777888887666554443 2223322 44567899999999999999999999885443 5788
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC-CCCCcHHHHH--HHhCCc
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVN-DAGDTPLHKA--AFVGRE 137 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~g~tpl~~A--~~~g~~ 137 (139)
.|.||||+|+..|+.+++++|++.|++++.++ ..|+||||+| +..|+.
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH
Confidence 99999999999999999999999999999986 6999999999 776654
No 85
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.68 E-value=1.4e-17 Score=109.33 Aligned_cols=117 Identities=23% Similarity=0.277 Sum_probs=78.4
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+.....+.+... +.+.+. ....+.++||+|+..|+.++++.|+..++ .++ +..|
T Consensus 35 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~-----~~~----~~~~ 103 (201)
T 3hra_A 35 VDTEGNTPLNIAVHNNDIEIAKALIDR-GADINL-QNSISDSPYLYAGAQGRTEILAYMLKHAT-----PDL----NKHN 103 (201)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSC-----CCT----TCCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHhccC-----ccc----cccc
Confidence 345667777777776665443333321 222222 23445677777777777777777775442 111 2567
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCC-CCCCcCCCCCCcHHHHHHHhCC
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQG-VDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~g-a~~~~~~~~g~tpl~~A~~~g~ 136 (139)
..|.||||+|+..++.+++++|++.| ++++.++..|+||||+|+..+.
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhcc
Confidence 77888888888888888888888887 8888888888888888887765
No 86
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.68 E-value=2e-17 Score=113.16 Aligned_cols=115 Identities=23% Similarity=0.205 Sum_probs=58.0
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
.+..|.+++|.++..+..+..+.+... +.+.+. .+..+.|+||+|+..|+.++++.|+..+++.+ .+
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----------~~ 98 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKH-GAQVNG-VTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-----------PE 98 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-----------CS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----------CC
Confidence 345566666666666554433322211 111111 22344566666666666666666666554332 12
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
..|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCC
Confidence 234555555555555555555555555555555555555555555444
No 87
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.68 E-value=1e-17 Score=120.15 Aligned_cols=82 Identities=22% Similarity=0.304 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhc-ccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHC-KENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
.+.++||+|+..|+.++++.|+..+ .+.+ .+|..|.||||+|+..|+.+++++|++.|++++.+|..|+
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n----------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKD----------KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTT----------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCcc----------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence 5678899999999999999888775 3222 5788899999999999999999999999999999999999
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+.+
T Consensus 348 t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 348 TARQLAQANNHHN 360 (373)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999998864
No 88
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=1.5e-17 Score=120.99 Aligned_cols=82 Identities=33% Similarity=0.490 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
..+.|+||+|+..|+.++++.|+..+++++ .+|..|.||||+|+..++.+++++|++.|++++.+|..|+
T Consensus 309 ~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n----------~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~ 378 (437)
T 1n11_A 309 RMGYTPLHVASHYGNIKLVKFLLQHQADVN----------AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT 378 (437)
T ss_dssp SSCCCHHHHHHHSSCSHHHHHHHHTTCCTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCCCC----------CCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCC
Confidence 345677777777777777777777764333 4677788888888888888888888888888888888888
Q ss_pred cHHHHHHHhCCc
Q psy15728 126 TPLHKAAFVGRE 137 (139)
Q Consensus 126 tpl~~A~~~g~~ 137 (139)
|||++|+..|+.
T Consensus 379 t~l~~A~~~g~~ 390 (437)
T 1n11_A 379 TPLAIAKRLGYI 390 (437)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHcCcH
Confidence 888888877764
No 89
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=8.2e-18 Score=115.28 Aligned_cols=115 Identities=19% Similarity=0.203 Sum_probs=88.4
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
|.+.++.+++.+..+..+.+.. .+.+.+......+.++||+|+..|+.++++.|+..+++++ .+|..|.
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~~g~ 73 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV----------LRKKNGA 73 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTCC
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCC
Confidence 3445666666665544433332 2233444445567899999999999999999998875443 4678899
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 119 (285)
T 1wdy_A 74 TPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHH
Confidence 9999999999999999999999999999999999999999988753
No 90
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.67 E-value=1.4e-18 Score=114.02 Aligned_cols=116 Identities=13% Similarity=0.070 Sum_probs=90.1
Q ss_pred cCCCCcchhhhhhccCCC---ccCCCchhhHHhhhcCHHHHHHHHHHHHHcCC------HHHHHHHHHhccccccccccc
Q psy15728 11 APGGNRTHDQVRTRHSSS---EEETPNSLSAELNQLSVKEIHELFLYNCRNGQ------LDKIKQLLDHCKENNVEINLS 81 (139)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~------~~~~~~ll~~~~~~~~~~~~~ 81 (139)
..|.+++|.++..+.... ..+.....+.+++... ..+.||||+|+..+. .++++.|+..|++++
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin------ 108 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT------ 108 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS------
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC------
Confidence 568889999987664321 1222233444444433 678999999999886 678999999986554
Q ss_pred ccCccCCCCCC-cHHHHHHHhC-----CHHHHHHHHh-CCCCCCcCCCCCCcHHHHHHHhCCc
Q psy15728 82 QKGESKSNLGW-TPLHLASYFG-----HKSVVEFLLD-QGVDINAVNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 82 ~~~~~~d~~g~-t~l~~a~~~~-----~~~~~~~Ll~-~ga~~~~~~~~g~tpl~~A~~~g~~ 137 (139)
.+|..|. ||||+|+..+ ..+++++|++ .|++++.+|..|+||||+|+..|+.
T Consensus 109 ----~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 109 ----ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp ----SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred ----ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCH
Confidence 5788899 9999999844 3568999999 9999999999999999999998875
No 91
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.67 E-value=1.1e-17 Score=121.61 Aligned_cols=119 Identities=28% Similarity=0.293 Sum_probs=87.1
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccC
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESK 87 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 87 (139)
..+..|.+++|.++..+..+..+.+... +.+.+ .....+.++||+|+..|+.++++.|+..+++.+ .+
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~-~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~ 76 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR-GASPN-VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN----------AK 76 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT-TCCSC-CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS----------CC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----------CC
Confidence 4467788899999988877665554432 22222 223456789999999999999999998875433 46
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 88 SNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 88 d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 77 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 127 (437)
T 1n11_A 77 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE 127 (437)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 778889999999999999999999889998888888899999988888753
No 92
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.67 E-value=1.2e-16 Score=107.49 Aligned_cols=121 Identities=17% Similarity=0.075 Sum_probs=93.1
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHh--hhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCc
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAEL--NQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGE 85 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~ 85 (139)
.++..|.+++|.++..+..+..+.+........ ....+..+.++||+|+..|+.++++.|+..+++.+
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------- 73 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM---------- 73 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc----------
Confidence 346788899999999888766555554221111 12234567899999999999999999998875443
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhCCC----CCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 86 SKSNLGWTPLHLASYFGHKSVVEFLLDQGV----DINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 86 ~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga----~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|..|.||||+|+..++.+++++|++.++ +++..+..|.||||+|+..|+.+
T Consensus 74 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 130 (241)
T 1k1a_A 74 ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 130 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH
Confidence 467889999999999999999999999887 88888999999999999988754
No 93
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.67 E-value=2.6e-17 Score=118.05 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=90.4
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHH--------Hhccccccccc
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLL--------DHCKENNVEIN 79 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll--------~~~~~~~~~~~ 79 (139)
.++..+.+.+|.++..+. ...+.+.. ...+......+.|+||+|+..|+.++++.|+ ..+++.+
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn---- 160 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN---- 160 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT----
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc----
Confidence 446778899999998554 33344332 3445545467899999999999998887776 4453222
Q ss_pred ccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 80 LSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 80 ~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 161 ------~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~ 213 (373)
T 2fo1_E 161 ------AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFG 213 (373)
T ss_dssp ------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred ------CCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHH
Confidence 57889999999999999999999999999999999999999999999998753
No 94
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.66 E-value=7.5e-16 Score=105.49 Aligned_cols=84 Identities=32% Similarity=0.482 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
.++.++||+|+..|++++++.|+..+++.+. ..+..|.||||+|+..|+.+++++|++.|++++.++..|.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 73 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNF---------QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA 73 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCccc---------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 4678999999999999999999998865442 2367799999999999999999999999999999999999
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+.+
T Consensus 74 t~L~~A~~~~~~~ 86 (285)
T 1wdy_A 74 TPFLLAAIAGSVK 86 (285)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999998754
No 95
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.66 E-value=9.9e-17 Score=111.23 Aligned_cols=83 Identities=24% Similarity=0.240 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCC
Q psy15728 44 SVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA 123 (139)
Q Consensus 44 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 123 (139)
.+..+.|+||+|+..|+.++++.|+..+++++ .. .|.||||+|+..|+.+++++|++.|++++.++..
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 94 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNAGALKN----------LL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDK 94 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS----------CC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----------CC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 44577899999999999999999999985443 23 3899999999999999999999999999999999
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
|+||||+|+..|+.+
T Consensus 95 g~t~L~~A~~~g~~~ 109 (285)
T 3kea_A 95 GNTALYYAVDSGNMQ 109 (285)
T ss_dssp SCCHHHHHHHTTCHH
T ss_pred CCcHHHHHHHcCCHH
Confidence 999999999999864
No 96
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.66 E-value=4.1e-17 Score=113.12 Aligned_cols=46 Identities=28% Similarity=0.233 Sum_probs=21.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..|+
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 4444444444444444444444444444444444444444444443
No 97
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.65 E-value=1.5e-17 Score=118.48 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=86.0
Q ss_pred ccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccc-------
Q psy15728 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINL------- 80 (139)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~------- 80 (139)
..+..|.+++|.++..+..+..+.+.... .......+.++||+|+..|+.++++.|+..+...+.+.+.
T Consensus 48 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 123 (364)
T 3ljn_A 48 IQNRFGCTALHLACKFGCVDTAKYLASVG----EVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDE 123 (364)
T ss_dssp CCCTTCCCHHHHHHHHCCHHHHHHHHHHC----CCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHCC----CCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcch
Confidence 34556777777777776654433332211 1223345677888888888888888888774333322221
Q ss_pred ----cccCccCCCCCCcHHHHHHHhC--CHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 81 ----SQKGESKSNLGWTPLHLASYFG--HKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 81 ----~~~~~~~d~~g~t~l~~a~~~~--~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
....+..|..|.||||+|+..| +.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 124 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 124 REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE 187 (364)
T ss_dssp CCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 0001125677889999999999 899999999999999999999999999999888754
No 98
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.65 E-value=1.9e-17 Score=116.84 Aligned_cols=127 Identities=17% Similarity=0.168 Sum_probs=98.7
Q ss_pred cCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccc------------
Q psy15728 11 APGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEI------------ 78 (139)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~------------ 78 (139)
..+.+.++.|++.+..+..+.+. ..+.+++......+.||||+|+..|+.++++.||.+++.++..-
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL-~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~ 101 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAI 101 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHH-HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHh
Confidence 34556788888888876655544 34556665556667899999999999999999999987665310
Q ss_pred -----------cccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcC----------CCCCCcHHHHHHHhCCc
Q psy15728 79 -----------NLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAV----------NDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 79 -----------~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~----------~~~g~tpl~~A~~~g~~ 137 (139)
......+..|..|.||+|+|+..++.+++++|++.|++++.. +..|.||||+|+..|+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~ 181 (337)
T 4g8k_A 102 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 181 (337)
T ss_dssp HTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH
T ss_pred cccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH
Confidence 111223467899999999999999999999999999998764 45689999999999986
Q ss_pred c
Q psy15728 138 V 138 (139)
Q Consensus 138 ~ 138 (139)
+
T Consensus 182 ~ 182 (337)
T 4g8k_A 182 E 182 (337)
T ss_dssp H
T ss_pred H
Confidence 4
No 99
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.64 E-value=3e-16 Score=105.44 Aligned_cols=120 Identities=23% Similarity=0.308 Sum_probs=96.4
Q ss_pred CccccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCcc
Q psy15728 7 RIKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGES 86 (139)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~ 86 (139)
..++..|.+++|.++..+..+..+.+... +.+.+. ....+.++||+|+..|+.++++.|+..++..+ .
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~ 72 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDT-CSEDQRTPLMEAAENNHLEAVKYLIKAGALVD----------P 72 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC----------C
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCc-cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC----------C
Confidence 34567889999999999887665444332 233333 34567899999999999999999998875433 5
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhCC-CCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 87 KSNLGWTPLHLASYFGHKSVVEFLLDQG-VDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 87 ~d~~g~t~l~~a~~~~~~~~~~~Ll~~g-a~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
++..|.||||+|+..++.+++++|++.| ++++..+..|.||||+|+..|+.+
T Consensus 73 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 125 (237)
T 3b7b_A 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD 125 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH
Confidence 6888999999999999999999999998 899999999999999999988753
No 100
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.63 E-value=3.3e-15 Score=105.36 Aligned_cols=87 Identities=30% Similarity=0.425 Sum_probs=69.4
Q ss_pred hhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC-CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc
Q psy15728 41 NQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS-NLGWTPLHLASYFGHKSVVEFLLDQGVDINA 119 (139)
Q Consensus 41 ~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d-~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~ 119 (139)
......++.++||.|+..|++++|+.||+.|++++ .++ ..|+||||+|+..|+.+++++|+++|++++.
T Consensus 18 ~~~~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn----------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~ 87 (337)
T 4g8k_A 18 GRRAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVN----------FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 87 (337)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTT----------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC----------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhh
Confidence 34455678999999999999999999999986554 344 4589999999999999999999999987654
Q ss_pred ---------------------------------CCCCCCcHHHHHHHhCCc
Q psy15728 120 ---------------------------------VNDAGDTPLHKAAFVGRE 137 (139)
Q Consensus 120 ---------------------------------~~~~g~tpl~~A~~~g~~ 137 (139)
+|..|+||||+|+..|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 88 RKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred hccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 455667777777777664
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.62 E-value=1.4e-15 Score=109.20 Aligned_cols=83 Identities=27% Similarity=0.343 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHhcccccccccccccCccCC--CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCC
Q psy15728 46 KEIHELFLYNCRN-GQLDKIKQLLDHCKENNVEINLSQKGESKS--NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVND 122 (139)
Q Consensus 46 ~~~~~~l~~a~~~-g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d--~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~ 122 (139)
....++||+|+.. |++++++.||..+++++ ..+ ..|.||||+|+..++.+++++|++.|++++.+|.
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn----------~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~ 266 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVN----------WVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS 266 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTT----------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCC----------ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC
Confidence 3457899999999 99999999999886554 344 7799999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhCCcc
Q psy15728 123 AGDTPLHKAAFVGREV 138 (139)
Q Consensus 123 ~g~tpl~~A~~~g~~~ 138 (139)
.|+||||+|+..|+.+
T Consensus 267 ~G~TpLh~A~~~g~~~ 282 (368)
T 3jue_A 267 AGRGPLHHATILGHTG 282 (368)
T ss_dssp TSCCHHHHHHHHTCHH
T ss_pred CCCCHHHHHHHcCcHH
Confidence 9999999999999864
No 102
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.62 E-value=3.6e-16 Score=104.71 Aligned_cols=116 Identities=23% Similarity=0.284 Sum_probs=76.0
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
+..+.+.++.++..+.....+.+.. .+..........+.++||+|+..|+.++++.|+..+++.+ ..+.
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~ 107 (240)
T 3eu9_A 39 DKENVTLLHWAAINNRIDLVKYYIS-KGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPS----------LIDG 107 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT----------CCCT
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHH-cCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCc----------ccCC
Confidence 4556667777776665544333322 1222233333345677777777777777777777664332 4566
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++
T Consensus 108 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 108 EGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence 77788888888888888888888888888778788888888776554
No 103
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.62 E-value=1.7e-15 Score=106.64 Aligned_cols=88 Identities=30% Similarity=0.439 Sum_probs=76.8
Q ss_pred hcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCC
Q psy15728 42 QLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN 121 (139)
Q Consensus 42 ~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~ 121 (139)
......+.++||.|+..|+.+.++.++.... .+++ ..|..|.||||+|+..|+.+++++|++.|++++.++
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 88 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLN-----VNCH----ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTCC----CSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcC-----CCcc----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 3345677899999999999999999987532 2222 678899999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHhCCcc
Q psy15728 122 DAGDTPLHKAAFVGREV 138 (139)
Q Consensus 122 ~~g~tpl~~A~~~g~~~ 138 (139)
..|+||||+|+..|+.+
T Consensus 89 ~~g~t~L~~A~~~g~~~ 105 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYE 105 (351)
T ss_dssp TTCCCHHHHHHHTTCHH
T ss_pred CCCCcHHHHHHHCCCHH
Confidence 99999999999999864
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.62 E-value=3.3e-15 Score=103.48 Aligned_cols=89 Identities=17% Similarity=0.176 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHh---CCHHHHHHHHhCCCCCCcCCC
Q psy15728 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYF---GHKSVVEFLLDQGVDINAVND 122 (139)
Q Consensus 46 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~---~~~~~~~~Ll~~ga~~~~~~~ 122 (139)
....++|+.|+..|+.+.+..++..+.+.+....+ +..|..|.||||+|+.. ++.+++++|++.|++++.+|.
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l----~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~ 203 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPL----ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG 203 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCC----SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhhcchhhhccc----cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC
Confidence 34568999999999999999999988655432112 25688899999999999 899999999999999999999
Q ss_pred CCCcHHHHHHHhCCcc
Q psy15728 123 AGDTPLHKAAFVGREV 138 (139)
Q Consensus 123 ~g~tpl~~A~~~g~~~ 138 (139)
.|+||||+|+..|+.+
T Consensus 204 ~g~TpLh~A~~~g~~~ 219 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAE 219 (278)
T ss_dssp TCCCHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHcCCHH
Confidence 9999999999999864
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.61 E-value=1.3e-15 Score=113.12 Aligned_cols=86 Identities=19% Similarity=0.199 Sum_probs=74.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHH---hCCHHHHHHHHhCCCCCCcCCCCCC
Q psy15728 49 HELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASY---FGHKSVVEFLLDQGVDINAVNDAGD 125 (139)
Q Consensus 49 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~---~~~~~~~~~Ll~~ga~~~~~~~~g~ 125 (139)
.+.||.|+..|+++.++.||..+++++...... ..|..|.||||+|+. .|+.+++++|++.|++++.+|..|+
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~----~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGP----DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGN 208 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCS----SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSC
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCc----ccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCC
Confidence 467999999999999999999997665422211 347889999999966 8999999999999999999999999
Q ss_pred cHHHHHHHhCCcc
Q psy15728 126 TPLHKAAFVGREV 138 (139)
Q Consensus 126 tpl~~A~~~g~~~ 138 (139)
||||+|+..|+.+
T Consensus 209 TpLh~A~~~g~~~ 221 (497)
T 3lvq_E 209 TALHYAALYNQPD 221 (497)
T ss_dssp CHHHHHTTTTCHH
T ss_pred cHHHHHHHcCCHH
Confidence 9999999999865
No 106
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.60 E-value=5.1e-16 Score=107.57 Aligned_cols=114 Identities=25% Similarity=0.364 Sum_probs=90.4
Q ss_pred cCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCC
Q psy15728 11 APGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNL 90 (139)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~ 90 (139)
..+.+.++.++..+..+....+.. .+.+.+. .+..+.|+||+|+..|+.++++.|+..+++++ .+|..
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------~~~~~ 105 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLE-RGADINY-ANVDGLTALHQACIDDNVDMVKFLVENGANIN----------QPDNE 105 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHH-HCCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTT
T ss_pred cCCccHHHHHHHcCCHHHHHHHHH-cCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----------CCCCC
Confidence 344566788887777665544432 2222322 23457899999999999999999999885443 57888
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCC
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~ 136 (139)
|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 151 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcch
Confidence 9999999999999999999999999999999999999999976654
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.60 E-value=4e-16 Score=104.50 Aligned_cols=118 Identities=22% Similarity=0.207 Sum_probs=92.6
Q ss_pred ccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCC
Q psy15728 10 FAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN 89 (139)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~ 89 (139)
+..+.+.++.++..+.....+.+... +.+.+. ....+.++||+|+..|+.++++.|+..++..+. ..+.
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---------~~~~ 74 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEA-GYDVRQ-PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ---------LGGD 74 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CBTT
T ss_pred ccccchHHHHHHHcCChHHHHHHHHc-CCCcCC-CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh---------hcCC
Confidence 34556678888887776655444332 222222 335678999999999999999999998864432 2345
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 90 LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 90 ~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS 123 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH
Confidence 5899999999999999999999999999999999999999999998754
No 108
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.58 E-value=5.1e-15 Score=103.59 Aligned_cols=87 Identities=18% Similarity=0.197 Sum_probs=73.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHh---CCHHHHHHHHhCCCCCCcCCCCC
Q psy15728 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYF---GHKSVVEFLLDQGVDINAVNDAG 124 (139)
Q Consensus 48 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~---~~~~~~~~Ll~~ga~~~~~~~~g 124 (139)
..++|+.|+..|+++.++.|+..+++++...... ..+..|.||||+|+.. ++.+++++|++.|++++.+|..|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~----~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G 226 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGP----DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG 226 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECS----SSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCc----ccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC
Confidence 3578999999999999999998886554311100 1578899999999997 89999999999999999999999
Q ss_pred CcHHHHHHHhCCcc
Q psy15728 125 DTPLHKAAFVGREV 138 (139)
Q Consensus 125 ~tpl~~A~~~g~~~ 138 (139)
+||||+|+..|+.+
T Consensus 227 ~TpLh~A~~~g~~~ 240 (301)
T 2b0o_E 227 NTALHYAALYNQPD 240 (301)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 99999999999864
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.56 E-value=1.2e-16 Score=96.56 Aligned_cols=109 Identities=26% Similarity=0.362 Sum_probs=85.3
Q ss_pred cccCCCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCC
Q psy15728 9 KFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKS 88 (139)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d 88 (139)
++..|.+.+|.++..+..+..+.+... +.+.+. .+..+.++||+|+..|+.++++.|+..+++.+ .+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~-~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----------~~d 72 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN----------ARS 72 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSC-CCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT----------CCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc----------ccC
Confidence 467888999999988876554444332 222222 33567899999999999999999998875443 578
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHH
Q psy15728 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLH 129 (139)
Q Consensus 89 ~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~ 129 (139)
..|.||||+|+..++.+++++|++.|++++.++..|.+|-.
T Consensus 73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 73 KDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113 (115)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC----
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccccc
Confidence 88999999999999999999999999999999999998853
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.56 E-value=3.8e-16 Score=110.22 Aligned_cols=80 Identities=19% Similarity=0.098 Sum_probs=68.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCC---HHHHHHHHhCC-CCCCc
Q psy15728 44 SVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGH---KSVVEFLLDQG-VDINA 119 (139)
Q Consensus 44 ~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~---~~~~~~Ll~~g-a~~~~ 119 (139)
.+..+.||||+|+..|+.++++.||..+++++ .+|..|+||||+|+..|+ .++++.|++.+ ++++.
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n----------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~ 196 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRL----------YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 196 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC----------CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC
Confidence 45678899999999999999999999885444 578889999999999988 67777777775 78999
Q ss_pred CCCCCCcHHHHHHH
Q psy15728 120 VNDAGDTPLHKAAF 133 (139)
Q Consensus 120 ~~~~g~tpl~~A~~ 133 (139)
+|..|+||||+|+.
T Consensus 197 ~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 197 EDSMNRTILHHIII 210 (327)
T ss_dssp ECTTCCCHHHHHHH
T ss_pred CCCCCCCHHHHHHH
Confidence 99999999999998
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.55 E-value=5.6e-17 Score=116.77 Aligned_cols=119 Identities=16% Similarity=0.133 Sum_probs=87.3
Q ss_pred CCCCcchhhhhhccCCCccCCCchhhHH-hhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCC
Q psy15728 12 PGGNRTHDQVRTRHSSSEEETPNSLSAE-LNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNL 90 (139)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~ 90 (139)
.+.+++|.+++.+..+..+.+.....+. ........+.+|||+|+..|+.++++.|+..+++... .+++ ..+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-~~i~----~~~-- 163 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-AMIQ----AEN-- 163 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-HHHS----HHH--
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-cccC----CCC--
Confidence 3446788888888776655554432211 0012234567899999999999999999998853211 1111 112
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCc--CCCCCCcHHHHHH-HhCCcc
Q psy15728 91 GWTPLHLASYFGHKSVVEFLLDQGVDINA--VNDAGDTPLHKAA-FVGREV 138 (139)
Q Consensus 91 g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~--~~~~g~tpl~~A~-~~g~~~ 138 (139)
.||||+|+..|+.+++++|++.|++++. .|..|.||||+|+ ..|+.+
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred -CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 8999999999999999999999999887 8889999999999 999865
No 112
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.50 E-value=6.1e-15 Score=85.86 Aligned_cols=92 Identities=33% Similarity=0.418 Sum_probs=70.6
Q ss_pred CCCcchhhhhhccCCCccCCCchhhHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCC
Q psy15728 13 GGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGW 92 (139)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~ 92 (139)
|.+++|.++..+..+..+.+.. .+.+.+. .+..+.||||+|+..|+.++++.|+..+++++ .+|..|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~-~g~~~n~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----------~~d~~g~ 69 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLE-AGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN----------AKDKNGR 69 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHH-TTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT----------CCCTTSC
T ss_pred CCcHHHHHHHcCCHHHHHHHHH-cCCCCcc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----------ccCCCCC
Confidence 5677888887776554433332 2222222 34567899999999999999999999885443 5788999
Q ss_pred cHHHHHHHhCCHHHHHHHHhCCCC
Q psy15728 93 TPLHLASYFGHKSVVEFLLDQGVD 116 (139)
Q Consensus 93 t~l~~a~~~~~~~~~~~Ll~~ga~ 116 (139)
||||+|+..++.+++++|++.||+
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999985
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.35 E-value=1.4e-13 Score=99.06 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHhcccccccccccccCccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC---CcCCCC
Q psy15728 47 EIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDI---NAVNDA 123 (139)
Q Consensus 47 ~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~---~~~~~~ 123 (139)
...|+||+|+..|+.++++.|+..++.... ....+..|.||||+|+..|+.+++++|++.|+++ +..+.+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-------~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~ 163 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEI-------VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN 163 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSS-------CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHH-------HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC
Confidence 346999999999999999999988752211 0023445789999999999999999999999862 332333
Q ss_pred CCcHHHHHHHhCCcc
Q psy15728 124 GDTPLHKAAFVGREV 138 (139)
Q Consensus 124 g~tpl~~A~~~g~~~ 138 (139)
.||||+|+..|+.+
T Consensus 164 -~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 164 -YHAFRLAAENGHLH 177 (376)
T ss_dssp -HHHHHHHHHTTCHH
T ss_pred -CCHHHHHHHCCCHH
Confidence 99999999999865
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.27 E-value=3.5e-12 Score=76.33 Aligned_cols=53 Identities=30% Similarity=0.308 Sum_probs=47.8
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCCCCCCcHHHHHHHhCCcc
Q psy15728 86 SKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGREV 138 (139)
Q Consensus 86 ~~d~~g~t~l~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~tpl~~A~~~g~~~ 138 (139)
..|..|.|+||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+..
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~ 71 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLE 71 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 46788999999999999999999999999999999999999999999998754
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=59.91 E-value=46 Score=24.37 Aligned_cols=59 Identities=22% Similarity=0.337 Sum_probs=43.7
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccc-----ccccCccCCCCCCcHHHHHHHhCCHHHHHHHHh
Q psy15728 53 LYNCRNGQLDKIKQLLDHCKENNVEIN-----LSQKGESKSNLGWTPLHLASYFGHKSVVEFLLD 112 (139)
Q Consensus 53 ~~a~~~g~~~~~~~ll~~~~~~~~~~~-----~~~~~~~~d~~g~t~l~~a~~~~~~~~~~~Ll~ 112 (139)
...+..|+...|..++..|++++-.+. .=... ..-.-|.|.+|+|.+..+.+++..|+.
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~-~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRP-SAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCT-TTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCC-cccccCchhhhhhhhhhhhhHHHHhhh
Confidence 455678999999999999987773211 10111 124458999999999999999998886
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=51.73 E-value=18 Score=16.80 Aligned_cols=21 Identities=14% Similarity=0.286 Sum_probs=17.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHH
Q psy15728 48 IHELFLYNCRNGQLDKIKQLL 68 (139)
Q Consensus 48 ~~~~l~~a~~~g~~~~~~~ll 68 (139)
-...+..|+..|+++.++.|=
T Consensus 13 iEQqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 13 IRKQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHH
Confidence 356688899999999998763
Done!