RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy15728
(139 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 74.6 bits (182), Expect = 2e-17
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
G L +K LL N + TPLH+A+ GH V ++LL
Sbjct: 8 SFMGHLPIVKNLLQR----GASPN------VSNVKVETPLHMAARAGHTEVAKYLLQNKA 57
Query: 116 DINAVNDAGDTPLHKAAFVGRE 137
+NA TPLH AA +G
Sbjct: 58 KVNAKAKDDQTPLHCAARIGHT 79
Score = 66.2 bits (160), Expect = 2e-14
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 85 ESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
+K+ LG++PLH A+ GH +V LL G N V+ G TPL A +G
Sbjct: 324 NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 376
Score = 63.5 bits (153), Expect = 2e-13
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
TPLH+AS+ GH +V+ LL +G N N +TPLH AA G
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHT 46
Score = 51.1 bits (121), Expect = 4e-09
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
+ G++ + LL+ N G TPLH+A + + +V+ LL +G
Sbjct: 140 AKYGKVRVAELLLERDAHPNA----------AGKNGLTPLHVAVHHNNLDIVKLLLPRGG 189
Query: 116 DINAVNDAGDTPLHKAAFVG 135
++ G TPLH AA
Sbjct: 190 SPHSPAWNGYTPLHIAAKQN 209
Score = 50.4 bits (119), Expect = 7e-09
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 27 SSEEETPNSLSAELNQLSVKEI-----HELFLYNCRNGQLDKIKQLLDHCKENNVEINLS 81
+ +++TP +A + ++ ++ L I H + +
Sbjct: 63 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122
Query: 82 QKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
+ G+TPLH+A+ +G V E LL++ NA G TPLH A
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNL 178
Score = 45.7 bits (107), Expect = 4e-07
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 13/69 (18%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFL---LD 112
+ G D + LL + N S+ G TPL +A G+ SV + L D
Sbjct: 338 AQQGHTDIVTLLLKN----GASPNE------VSSDGTTPLAIAKRLGYISVTDVLKVVTD 387
Query: 113 QGVDINAVN 121
+ + +
Sbjct: 388 ETSFVLVSD 396
Score = 45.0 bits (105), Expect = 5e-07
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 52 FLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLL 111
+ G + + LL N+ + G TPLHL + GH V + L+
Sbjct: 235 LHLAAQEGHAEMVALLLSKQANGNL----------GNKSGLTPLHLVAQEGHVPVADVLI 284
Query: 112 DQGVDINAVNDAGDTPLHKAAFVGRE 137
GV ++A G TPLH A+ G
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNI 310
Score = 43.8 bits (102), Expect = 2e-06
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
R G + K LL + ++N +K+ TPLH A+ GH ++V+ LL+
Sbjct: 41 ARAGHTEVAKYLLQN----KAKVN------AKAKDDQTPLHCAARIGHTNMVKLLLENNA 90
Query: 116 DINAVNDAGDTPLHKA 131
+ N AG TPLH A
Sbjct: 91 NPNLATTAGHTPLHIA 106
Score = 41.5 bits (96), Expect = 8e-06
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 32 TPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEIN--LSQKG---ES 86
TP L+A+ + + N G + L +E +V + L + G ++
Sbjct: 233 TPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 292
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
+ +G+TPLH+AS++G+ +V+FLL D+NA G +PLH+AA G
Sbjct: 293 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 343
Score = 40.7 bits (94), Expect = 2e-05
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 69 DHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPL 128
+ + + ++S G TPLHLA+ GH +V LL + + N N +G TPL
Sbjct: 209 NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPL 268
Query: 129 HKAAFVGRE 137
H A G
Sbjct: 269 HLVAQEGHV 277
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 64.8 bits (156), Expect = 6e-14
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
+ G TP+ LA+ G VV +L+ QG + AV+ T A
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHH 267
Score = 48.2 bits (113), Expect = 4e-08
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLD--------QGVDINAVNDAGDTPLH 129
T LH + E L+ G D+NA++ +TPL
Sbjct: 29 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 79
Score = 44.0 bits (102), Expect = 1e-06
Identities = 7/56 (12%), Positives = 17/56 (30%), Gaps = 10/56 (17%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLL 111
+ G+++ + L+ + T LA H ++V+
Sbjct: 229 AQEGRIEVVMYLIQQ----GASVEA------VDATDHTARQLAQANNHHNIVDIFD 274
Score = 42.0 bits (97), Expect = 6e-06
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 93 TPLHLA-SYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136
+P+ L G ++ E + + V+I T LH A
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRH-NRTVLHWIASNSS 45
Score = 33.2 bits (74), Expect = 0.007
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 49 HELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVE 108
L + G+ L K V+ + + + +S+ G T LH A+ + +V+
Sbjct: 145 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVK 204
Query: 109 FL-LDQGVDINAVNDAGDTPLHKAAFVGRE 137
+L ++G + + ++ G TP+ AA GR
Sbjct: 205 YLVGEKGSNKDKQDEDGKTPIMLAAQEGRI 234
Score = 25.1 bits (53), Expect = 3.5
Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 36 LSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPL 95
+N + + + + N +K + L+ H + + + TPL
Sbjct: 21 TRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV--NAMDCDENTPL 78
Query: 96 HLASYFGHK 104
LA +
Sbjct: 79 MLAVLARRR 87
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 64.7 bits (156), Expect = 7e-14
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 49 HELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVE 108
E + + D I + LD +N ++ + G T L++A+ G+ S+V+
Sbjct: 223 KESKPNDKNGERKDSILENLDLKWIIANMLN------AQDSNGDTCLNIAARLGNISIVD 276
Query: 109 FLLDQGVDINAVNDAGDTPLHKAA 132
LLD G D N +G P+ A
Sbjct: 277 ALLDYGADPFIANKSGLRPVDFGA 300
Score = 50.4 bits (119), Expect = 6e-09
Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 34 NSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWT 93
N+ S+ N + + + + + N+ ++ G T
Sbjct: 59 NNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVD---------EHGNT 109
Query: 94 PLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKA 131
PLH + + +V+ L+ G + ++ G++ L KA
Sbjct: 110 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147
Score = 44.3 bits (103), Expect = 9e-07
Identities = 20/93 (21%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVV 107
+H + + + G K LD V+ ++ +S +N + + + S++
Sbjct: 181 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ-NRPIQSGTNEKESKPNDKNGERKDSIL 239
Query: 108 EFLLDQ---GVDINAVNDAGDTPLHKAAFVGRE 137
E L + +NA + GDT L+ AA +G
Sbjct: 240 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI 272
Score = 32.7 bits (73), Expect = 0.010
Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 61 LDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINA- 119
L ++ ++ + S + + H++ + V + + +++N
Sbjct: 43 LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102
Query: 120 VNDAGDTPLHKAAFVGR 136
V++ G+TPLH +
Sbjct: 103 VDEHGNTPLHWLTSIAN 119
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 63.2 bits (152), Expect = 2e-13
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ 113
G + +K L+ + N++ GWTPLH A+++G + L++
Sbjct: 205 VAAAKGYTEVLKLLIQARYDVNIKDYD----------GWTPLHAAAHWGKEEACRILVEN 254
Query: 114 GVDINAVNDAGDTPLHKAA 132
D+ AVN G T A
Sbjct: 255 LCDMEAVNKVGQTAFDVAD 273
Score = 52.0 bits (123), Expect = 2e-09
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 72 KENNVEINLSQKGESKSNL-GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHK 130
E ++E + ++ ++K A G V LL++G DIN N G T LH+
Sbjct: 20 SETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQ 79
Query: 131 AAFVGRE 137
A
Sbjct: 80 ACIDDNV 86
Score = 45.5 bits (106), Expect = 4e-07
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
+ G T LH+A+ G+ V++ L+ D+N + G TPLH AA G+E
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKE 245
Score = 39.3 bits (90), Expect = 5e-05
Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 8 IKFAPGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQL 67
+K A + ++Q++ R SE + + + +FL C +G +++ +L
Sbjct: 1 MKMADAKQKRNEQLK-RWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRL 59
Query: 68 LDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEF 109
L+ +IN + G T LH A + +V+F
Sbjct: 60 LER----GADIN------YANVDGLTALHQACIDDNVDMVKF 91
Score = 31.2 bits (69), Expect = 0.030
Identities = 7/66 (10%), Positives = 25/66 (37%), Gaps = 14/66 (21%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
G+ + + L+++ ++ + +G T +A + ++ +L +
Sbjct: 240 AHWGKEEACRILVEN----LCDMEA------VNKVGQTAFDVAD----EDILGYLEELQK 285
Query: 116 DINAVN 121
N ++
Sbjct: 286 KQNLLH 291
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 60.9 bits (146), Expect = 1e-12
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVD---INAVNDAGDTPLHKAAFVGRE 137
G T LHLA H+ ++FLL ++ ND G T LH AA +G
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58
Score = 50.5 bits (119), Expect = 7e-09
Identities = 19/46 (41%), Positives = 20/46 (43%)
Query: 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
TPLHLA SV+E LL G D A G TPL A
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP 238
Score = 45.9 bits (107), Expect = 2e-07
Identities = 9/61 (14%), Positives = 15/61 (24%), Gaps = 10/61 (16%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ 113
++ LL + + G TPL A + + L
Sbjct: 198 LAVEAQAASVLELLLKA----GADPTA------RMYGGRTPLGSALLRPNPILARLLRAH 247
Query: 114 G 114
G
Sbjct: 248 G 248
Score = 38.1 bits (87), Expect = 1e-04
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 7/80 (8%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
+ + LL + ++L +++LG T LHLA+ G S VE L G
Sbjct: 17 VIHQHEPFLDFLLGFSA-GHEYLDL------QNDLGQTALHLAAILGEASTVEKLYAAGA 69
Query: 116 DINAVNDAGDTPLHKAAFVG 135
+ G T LH A V
Sbjct: 70 GVLVAERGGHTALHLACRVR 89
Score = 25.8 bits (55), Expect = 2.1
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 117 INAVNDAGDTPLHKAAFVGRE 137
V + GDT LH A E
Sbjct: 2 FGYVTEDGDTALHLAVIHQHE 22
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 58.8 bits (141), Expect = 6e-12
Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 29/113 (25%)
Query: 54 YNCRNGQLDKIKQLLDHCKEN-------------------------NVEINLSQKG---E 85
G ++ +K LLD + + L G
Sbjct: 154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN 213
Query: 86 SKSNLGWTPLHLASYFGHKSVVEFLLDQ-GVDINAVNDAGDTPLHKAAFVGRE 137
+ G TPL LA H +V+ LL+Q ++IN + G T L A + +
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLK 266
Score = 57.7 bits (138), Expect = 2e-11
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ 113
L +++LL+ ++EIN + G T L LA K + E L +
Sbjct: 225 LAVEKKHLGLVQRLLEQ---EHIEIN------DTDSDGKTALLLAVELKLKKIAELLCKR 275
Query: 114 GVDINAVN 121
G + +
Sbjct: 276 GASTDCGD 283
Score = 51.9 bits (123), Expect = 2e-09
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 93 TPLHLASYFGHKSVVEFLLDQGVDINAV-NDAGDTPLHKAAFVGRE 137
L A +V+ LL+ G ++N + G TPLH A + RE
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRE 52
Score = 50.0 bits (118), Expect = 1e-08
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ-G 114
G++ +K L N+ + E G T L A+ GH V++ LLD+ G
Sbjct: 113 AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 172
Query: 115 VDINAVNDAGDTPLH 129
D+NA ++ G L
Sbjct: 173 ADVNACDNMGRNALI 187
Score = 45.0 bits (105), Expect = 5e-07
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 50 ELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEF 109
L + +N +D ++QLL+ +N + GWTPLH A + +VE
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEG----GANVNFQ-----EEEGGWTPLHNAVQMSREDIVEL 57
Query: 110 LLDQGVDINAVNDAGDTPLHKAAFVG 135
LL G D G TP AA G
Sbjct: 58 LLRHGADPVLRKKNGATPFLLAAIAG 83
Score = 26.9 bits (58), Expect = 0.90
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDIN----------AVNDAGDTPLHKAAFVGRE 137
G+T A+ +G ++FL +G ++N + G T L AA G
Sbjct: 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 57.2 bits (137), Expect = 4e-11
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)
Query: 30 EETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLL--DHCKENNVEINLSQKGESK 87
+ ++ L LS KE +FL +N +++++QLL + N L K
Sbjct: 29 QHFISANELSLMTLSYKEAIHIFLPGTKN--MEQVRQLLCLYYAHYNRNAKQLWSDAHKK 86
Query: 88 SNLGWTPLHLASYFGHKSVVE---FLLDQGVDINAVNDAGDTPLHKAAFVG 135
+A+ G S ++ LL + + AA G
Sbjct: 87 GIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 137
Score = 53.0 bits (126), Expect = 1e-09
Identities = 13/116 (11%), Positives = 30/116 (25%), Gaps = 10/116 (8%)
Query: 20 QVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEIN 79
Q+ + + L ++ ++ +K + G + L ++ +
Sbjct: 63 QLLCLYYAHYNRNAKQLWSDAHKKGIKS-EVICFVAAITGCSSALD-TLCLLLTSDEIVK 120
Query: 80 LSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVN--DAGDTPLHKAAF 133
+ LA+ GH V+ L + AA
Sbjct: 121 ------VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE 170
Score = 44.5 bits (104), Expect = 8e-07
Identities = 10/91 (10%), Positives = 22/91 (24%), Gaps = 6/91 (6%)
Query: 52 FLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLL 111
F+ N + + ++ + + L + + FLL
Sbjct: 241 FIARHVNRLKEMHDAFKLSNPDGVFDLVT-KSECLQGFYMLRNLIRRNDEVLLDDIRFLL 299
Query: 112 DQGVDINAVNDA-----GDTPLHKAAFVGRE 137
A + L A +G +
Sbjct: 300 SIPGIKALAPTATIPGDANELLRLALRLGNQ 330
Score = 42.6 bits (99), Expect = 4e-06
Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Query: 11 APGGNRTHDQVRTRHSSSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDKIKQLLDH 70
A NR + S+ + + ++ + L + LD I+ LL
Sbjct: 243 ARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNL-IRRNDEVLLDDIRFLLSI 301
Query: 71 CKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINA 119
I + L LA G++ LL + A
Sbjct: 302 PG-----IKALAPTATIPGDANELLRLALRLGNQGACALLLSIP-SVLA 344
Score = 39.5 bits (91), Expect = 5e-05
Identities = 10/63 (15%), Positives = 18/63 (28%), Gaps = 8/63 (12%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
NG L + +L + + + LA+ GH V+ L +
Sbjct: 134 AENGHLHVLNRLCELAPTEIMA--------MIQAENYHAFRLAAENGHLHVLNRLCELAP 185
Query: 116 DIN 118
Sbjct: 186 TEA 188
Score = 35.3 bits (80), Expect = 0.001
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 7/81 (8%)
Query: 52 FLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLL 111
F NG L + +L + + ++ + A GH +V+ FLL
Sbjct: 165 FRLAAENGHLHVLNRLCELAPTEATAMI-------QAENYYAFRWAAVGRGHHNVINFLL 217
Query: 112 DQGVDINAVNDAGDTPLHKAA 132
D V + K
Sbjct: 218 DCPVMLAYAEIHEFEYGEKYV 238
Score = 32.2 bits (72), Expect = 0.015
Identities = 14/90 (15%), Positives = 26/90 (28%), Gaps = 4/90 (4%)
Query: 51 LFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGE----SKSNLGWTPLHLASYFGHKSV 106
L ++N N + D +L+ N+ + E + S + L + V
Sbjct: 2 LTIHNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQV 61
Query: 107 VEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136
+ L N + HK
Sbjct: 62 RQLLCLYYAHYNRNAKQLWSDAHKKGIKSE 91
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 56.0 bits (133), Expect = 6e-11
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQ----GVDINAVNDAGDTPLHKA 131
G TPLH+A G+ V L++ G +++ N+ TPLH A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA 47
Score = 55.6 bits (132), Expect = 8e-11
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGR 136
G + LH AS G +V L+ G D + N DTPL A
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 222
Score = 39.4 bits (90), Expect = 4e-05
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 10/54 (18%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVV 107
G L ++ L+ + +L K+ TPL +A ++
Sbjct: 183 SASGRGLLPLVRTLVRS----GADSSL------KNCHNDTPLMVARSRRVIDIL 226
Score = 38.7 bits (88), Expect = 7e-05
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGV 115
G L + +L++ ++ E+++ +NL TPLHLA SVV L+ G
Sbjct: 11 VVQGNLPAVHRLVNLFQQGGRELDI------YNNLRQTPLHLAVITTLPSVVRLLVTAGA 64
Query: 116 DINAVNDAGDTPLHKAAFVGRE 137
A++ G T H A
Sbjct: 65 SPMALDRHGQTAAHLACEHRSP 86
Score = 24.0 bits (50), Expect = 7.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 122 DAGDTPLHKAAFVGR 136
+ GDTPLH A G
Sbjct: 1 EDGDTPLHIAVVQGN 15
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 53.7 bits (127), Expect = 3e-10
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 91 GWTPLHLASYFGHKS----VVEFLLDQGVDINAVNDAGDTPLHKA 131
G + LHLA K+ V+ + +N N+ TPLH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA 46
Score = 43.7 bits (101), Expect = 1e-06
Identities = 15/47 (31%), Positives = 19/47 (40%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
G T LHLA + +V LL G D+N V G +P
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPST 191
Score = 39.9 bits (91), Expect = 3e-05
Identities = 4/30 (13%), Positives = 11/30 (36%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVD 116
+ G++P L + + L ++
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 33.3 bits (74), Expect = 0.005
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGH 103
+ + +++ K + +N ++NL TPLHLA
Sbjct: 10 IIHEEKALTMEVIRQVKGDLAFLN------FQNNLQQTPLHLAVITNQ 51
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 52.9 bits (125), Expect = 7e-10
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 93 TPLHLASYFGHKSVVEFLLD-QGVDINAVNDAGDTPLHKAAFVGRE 137
PLH A V+ LL + + + G PLH +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAH 47
Score = 45.2 bits (105), Expect = 4e-07
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQ-GVDINAVNDAGDTPLHKAA 132
+ GWTPL A GH L+++ G + + V++ G A
Sbjct: 168 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 214
Score = 39.4 bits (90), Expect = 4e-05
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 9/59 (15%)
Query: 56 CRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQG 114
C + K+++LL K G PLH + F + FLL +
Sbjct: 8 CMENEFFKVQELLHSKPSLL---------LQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 38.6 bits (88), Expect = 9e-05
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 12/63 (19%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQ 113
+ G D L++ E +L N G +A ++ V +F L+
Sbjct: 178 HALAEGHGDAAVLLVEKY---GAEYDL------VDNKGAKAEDVAL---NEQVKKFFLNN 225
Query: 114 GVD 116
VD
Sbjct: 226 VVD 228
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 51.1 bits (121), Expect = 3e-09
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAA 132
+ G TPLHLA + L+ QG I N TPL A
Sbjct: 165 QDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK 210
Score = 50.7 bits (120), Expect = 4e-09
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 85 ESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLH 129
+ + G TPLH A+ + LL+ G + +A + T +H
Sbjct: 97 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMH 141
Score = 40.3 bits (93), Expect = 2e-05
Identities = 25/122 (20%), Positives = 38/122 (31%), Gaps = 42/122 (34%)
Query: 49 HELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFG------ 102
+ + +G+L+++K+ + K T LH A G
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLA---------TRTDQDSRTALHWACSAGHTEIVE 54
Query: 103 ---------------------------HKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVG 135
+V+ LL +G +NAVN G TPLH AA
Sbjct: 55 FLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKN 114
Query: 136 RE 137
R
Sbjct: 115 RH 116
Score = 38.0 bits (87), Expect = 1e-04
Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 11/67 (16%)
Query: 46 KEIHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKS 105
E + C ++++ K L+ I + ++ TPL +A G
Sbjct: 167 TEGNTPLHLACDEERVEEAKLLVSQ----GASIYI------ENKEEKTPLQVAKG-GLGL 215
Query: 106 VVEFLLD 112
+++ +++
Sbjct: 216 ILKRMVE 222
Score = 34.2 bits (77), Expect = 0.003
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 10/86 (11%)
Query: 52 FLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLL 111
Y + + LL+ + K + T +H A+ G+ ++ LL
Sbjct: 107 LHYAASKNRHEIAVMLLEGGANPDA----------KDHYEATAMHRAAAKGNLKMIHILL 156
Query: 112 DQGVDINAVNDAGDTPLHKAAFVGRE 137
N + G+TPLH A R
Sbjct: 157 YYKASTNIQDTEGNTPLHLACDEERV 182
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 47.5 bits (111), Expect = 5e-08
Identities = 11/46 (23%), Positives = 16/46 (34%)
Query: 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
TPL LA+ G + LLD + + P A+
Sbjct: 157 ETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHH 202
Score = 43.2 bits (100), Expect = 2e-06
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 106 VVEFLLDQGVDINAVNDA-GDTPLHKAAFVGRE 137
V+ LL QG ++NA D G+T LH AA R
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARA 36
Score = 39.8 bits (91), Expect = 3e-05
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 10/57 (17%)
Query: 54 YNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFL 110
R G + K LLD+ + ++ P +AS H +V L
Sbjct: 162 LAAREGSYEASKALLDN----FANREI------TDHMDRLPRDVASERLHHDIVRLL 208
Score = 36.7 bits (83), Expect = 3e-04
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 9/47 (19%)
Query: 64 IKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFL 110
I LL E+N + G T LHLA+ F + L
Sbjct: 5 ISDLLAQ----GAELN-----ATMDKTGETSLHLAARFARADAAKRL 42
Score = 25.9 bits (55), Expect = 1.8
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 92 WTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVG 135
TPL LA+ + +VE L+ DINA +++G T LH AA V
Sbjct: 91 TTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVN 134
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 42.6 bits (98), Expect = 2e-06
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 93 TPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLH 129
L A+ G + LL V++NA N G T L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39
Score = 42.6 bits (98), Expect = 2e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLDQG 114
+++ G T LA +G VV + G
Sbjct: 129 RNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 25.6 bits (54), Expect = 1.8
Identities = 7/21 (33%), Positives = 8/21 (38%)
Query: 117 INAVNDAGDTPLHKAAFVGRE 137
+ N GDT A GR
Sbjct: 126 VGHRNHKGDTACDLARLYGRN 146
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 40.0 bits (92), Expect = 1e-05
Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 41/126 (32%)
Query: 48 IHELFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYF---GHK 104
+H L + + + Q + V++ + T LHLA
Sbjct: 7 LHSLC-EAVKTRDIFGLLQAY----ADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61
Query: 105 SVVEFLLDQGVDI---------------------------------NAVNDAGDTPLHKA 131
+V+FL+ ++ N++G+TPL A
Sbjct: 62 HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 121
Query: 132 AFVGRE 137
+ E
Sbjct: 122 KRLKHE 127
Score = 39.2 bits (90), Expect = 4e-05
Identities = 8/38 (21%), Positives = 12/38 (31%)
Query: 89 NLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDT 126
G TPL +A H+ E L + +
Sbjct: 112 ESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEY 149
Score = 29.9 bits (66), Expect = 0.064
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 9/56 (16%)
Query: 91 GWTPLHL---ASYFGHKSVVEFLLDQGVDINA------VNDAGDTPLHKAAFVGRE 137
LH A + GVD+ ++ +T LH A
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDR 58
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 39.2 bits (89), Expect = 3e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFLLD 112
+ G P+ LA GH+ V +L
Sbjct: 98 RDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 34.5 bits (77), Expect = 0.001
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDINA 119
L A+ G V LL+ G + NA
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNA 31
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 39.5 bits (90), Expect = 3e-05
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
T LH A+ H+ VVE L+ G D++ + T + G E
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146
Score = 39.5 bits (90), Expect = 3e-05
Identities = 6/29 (20%), Positives = 8/29 (27%)
Query: 93 TPLHLASYFGHKSVVEFLLDQGVDINAVN 121
L A+ G V L+ G
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDW 32
Score = 37.9 bits (86), Expect = 8e-05
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 87 KSNLGWTPLHLASYFGHKSVVEFL 110
+S T ++ G++ + E L
Sbjct: 129 QSKFCKTAFDISIDNGNEDLAEIL 152
Score = 24.0 bits (50), Expect = 5.9
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 56 CRNGQLDKIKQLLDHCKENN 75
R GQ D+++ L+ +
Sbjct: 10 ARAGQDDEVRILMANGAPFT 29
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 38.6 bits (88), Expect = 5e-05
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 85 ESKSNLGWTPLHLASYFGHKSVVEFLLD 112
+ G TPL LA G + +V+ L
Sbjct: 127 HRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 34.0 bits (76), Expect = 0.002
Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQ-GVDINAVNDAGDTPLH 129
L A+ G V LL + V +A+N G T L
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ 41
Score = 30.9 bits (68), Expect = 0.031
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 85 ESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAAFVGRE 137
G P+HLA GH +VV FL + D++ + G TPL A G +
Sbjct: 95 NVPDGTGALPIHLAVQEGHTAVVSFLAAES-DLHRRDARGLTPLELALQRGAQ 146
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 33.5 bits (75), Expect = 0.003
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 24/106 (22%)
Query: 51 LFLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSNL-------------------- 90
L L + G+ D +++++ + ++ + +
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 63
Query: 91 ---GWTPLHLASYFGHKSVVEFLLDQGVDINAVNDA-GDTPLHKAA 132
GWTPLH A+ + V +FL++ G + A+ + T K
Sbjct: 64 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCE 109
Score = 32.7 bits (73), Expect = 0.005
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 93 TPLHLASYFGHKSVVEFLLDQGVDINA 119
L +S G +V+ ++ + D +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSL 29
Score = 31.6 bits (70), Expect = 0.015
Identities = 3/27 (11%), Positives = 6/27 (22%)
Query: 91 GWTPLHLASYFGHKSVVEFLLDQGVDI 117
G+ +FL +
Sbjct: 103 TAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 29.9 bits (65), Expect = 0.052
Identities = 3/24 (12%), Positives = 7/24 (29%)
Query: 90 LGWTPLHLASYFGHKSVVEFLLDQ 113
+ A G V+ + +
Sbjct: 1 MCDKEFMWALKNGDLDEVKDYVAK 24
Score = 29.5 bits (64), Expect = 0.061
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 23/104 (22%)
Query: 52 FLYNCRNGQLDKIKQLLDHCKENNVEINLSQKGESKSN---------------------- 89
F++ +NG LD++K + ++ N + +K +
Sbjct: 6 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 90 -LGWTPLHLASYFGHKSVVEFLLDQGVDINAVNDAGDTPLHKAA 132
TPL A Y GH S V+ LL +G D G T L
Sbjct: 66 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD 109
Score = 26.8 bits (57), Expect = 0.54
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 87 KSNLGWTPLHLASYFGHKSVVE 108
K G T L K++++
Sbjct: 97 KGPDGLTALEATDNQAIKALLQ 118
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2,
GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}
Length = 189
Score = 27.1 bits (59), Expect = 0.61
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 27 SSEEETPNSLSAELNQLSVKEIHELFLYNCRNGQLDK 63
S EE N + ++E ++ FL C +G L
Sbjct: 5 SWEEAEENGAVGAADAAQLQEWYKKFLEECPSGTLFM 41
>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
s100p [TaxId: 9606]}
Length = 94
Score = 25.5 bits (56), Expect = 1.1
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 27 SSEEETPNSLS-AELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNV 76
S E + +L+ EL L KE+ +DK+ + LD + V
Sbjct: 19 SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQV 69
>d1nria_ c.80.1.3 (A:) Hypothetical protein HI0754 {Haemophilus
influenzae [TaxId: 727]}
Length = 248
Score = 26.6 bits (58), Expect = 1.2
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 6/49 (12%)
Query: 31 ETPNSLSAELNQLSVKEIHELFL------YNCRNGQLDKIKQLLDHCKE 73
E N S ++++ S EI L L +I ++ +
Sbjct: 7 EQRNPNSVDIDRQSTLEIVRLMNEEDKLVPLAIESCLPQISLAVEQIVQ 55
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus),
s100b [TaxId: 9913]}
Length = 90
Score = 25.5 bits (56), Expect = 1.3
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 27 SSEEETPNSLS-AELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNV 76
S E + L +EL +L E+ +DK+ + LD +
Sbjct: 19 SGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGEC 69
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain
{Bacillus cereus [TaxId: 1396]}
Length = 244
Score = 26.2 bits (58), Expect = 1.4
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 60 QLDKIKQLLDHCKENNVEINLSQKGESKSNLGWTPLHLASYFGHKSVVEFLLDQGVDIN 118
+ + K++++H K+NN+E+ L LG + L S+F LD G D
Sbjct: 48 IVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDL-SFFAELGADGIRLDVGFDGL 105
>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),
calgizzarin s100c (s100a11) [TaxId: 9823]}
Length = 95
Score = 25.1 bits (55), Expect = 1.6
Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 27 SSEEETPNSLS-AELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVE 77
+ + +S E E+ G LD++ + LD + ++
Sbjct: 19 AGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLD 70
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
calgranulin C, s100a12 [TaxId: 9606]}
Length = 87
Score = 24.3 bits (53), Expect = 2.9
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 27 SSEEETPNSLS-AELNQLSVKEIHELFLYNCRNGQLDKIKQLLDHCKENNVEIN 79
S + ++LS EL QL KE+ +D+I Q LD ++ V+
Sbjct: 18 SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQ 71
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation
factor SelB {Moorella thermoacetica [TaxId: 1525]}
Length = 64
Score = 23.1 bits (50), Expect = 5.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Query: 38 AELNQLSVKEIHELFLYNCRNGQLDKIK 65
A L E+ EL Y R G L KI
Sbjct: 30 AGSFNLDPSELEELLHYLVREGVLVKIN 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.131 0.382
Gapped
Lambda K H
0.267 0.0676 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 471,870
Number of extensions: 18535
Number of successful extensions: 184
Number of sequences better than 10.0: 1
Number of HSP's gapped: 151
Number of HSP's successfully gapped: 103
Length of query: 139
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 62
Effective length of database: 1,350,386
Effective search space: 83723932
Effective search space used: 83723932
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 48 (22.4 bits)