BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15732
(550 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36407|TRI23_RAT E3 ubiquitin-protein ligase TRIM23 OS=Rattus norvegicus GN=Trim23
PE=2 SV=2
Length = 573
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 233/573 (40%), Positives = 322/573 (56%), Gaps = 93/573 (16%)
Query: 53 GTRTTRILILELALECRVCEDIFLTQGDKVPRLLHCGHTVCLACLLRLPIKDDTITCPFD 112
G+R T ++ + LEC VCED+F QGDKVPRLL CGHTVC CL RLP+ I CPFD
Sbjct: 19 GSRGTAVVKV---LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFD 75
Query: 113 RQPTPVGYSGVWGLKKNFALLELIEKIQTND----EKATESIPLFSAELHIKCDFSLQLH 168
RQ T +G SGVWGLKKNFALLEL+E++Q A E++ + +
Sbjct: 76 RQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEALGISGESI----------- 124
Query: 169 IKCDEDESHIAVLYCTVCASHLCEQCASDSHATRTLQKHRRIPLSEKPREKPFCSSHPTN 228
I+CDEDE+H+A +YCTVCA+HLC +C+ +H+T+TL KHRR+PL++KP EK C H +
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCCQHQVH 184
Query: 229 IAEFICLEEHCQTSAQYPPLMCFICKDYGRHKTHKHALVEIEAENLRSYVKNASSNVQHL 288
EF+CLEE CQTS PLMC +CK+YG+H+ HKH+++E EA +R+ + + + ++
Sbjct: 185 AIEFVCLEEACQTS----PLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF 240
Query: 289 IEEITESVNTVDLVVSKIEGN-------TGPSGTE--PGTGDQARAKVHAYFNHLRESLL 339
EEI++ + +V IEG G + TE PGT + AR+ V AYF+ L E+L
Sbjct: 241 TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLC 300
Query: 340 VQEAAATSAVD-------MFVRER---------------LGCLVQLHDDMGFWL--QEVA 375
QE A S VD +++R++ L C DD L QE+
Sbjct: 301 RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCKTLQQDDCRVVLAKQEIT 360
Query: 376 KLY--LKCEQ-----------------MILQDDARVLTSG----REIKEAIETIEKYDTL 412
+L L+ +Q + D RV R + ++ K L
Sbjct: 361 RLLETLQKQQQQFTEVADHIQLDASIPVTFTKDNRVYHGPKMEIRVVTLGLDGAGKTTIL 420
Query: 413 FNELTPEQIHPDPCIPITFT-------KDNRVHIGPKMEMRVV--------TLGLDSADS 457
F E + P P I K +G K ++R + + DS
Sbjct: 421 FKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDS 480
Query: 458 ADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGRSW 517
+ ++R+ EA +EL KL+ EKEL+DA LL+ ANKQD+ G +VE ITE L+KLCCGRSW
Sbjct: 481 SHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSW 540
Query: 518 HIQACNAQSGEGLHEGLDWLSRQLIAAGVNDMS 550
+IQ C+A+SG GL+EGLDWLSRQL+AAGV D++
Sbjct: 541 YIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA 573
>sp|P36406|TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23 OS=Homo sapiens GN=TRIM23 PE=1
SV=1
Length = 574
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/416 (48%), Positives = 268/416 (64%), Gaps = 32/416 (7%)
Query: 53 GTRTTRILILELALECRVCEDIFLTQGDKVPRLLHCGHTVCLACLLRLPIKDDTITCPFD 112
G+R T ++ + LEC VCED+F QGDKVPRLL CGHTVC CL RLP+ I CPFD
Sbjct: 19 GSRGTAVVKV---LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFD 75
Query: 113 RQPTPVGYSGVWGLKKNFALLELIEKIQTND----EKATESIPLFSAELHIKCDFSLQLH 168
RQ T +G SGVWGLKKNFALLEL+E++Q A ESI + +
Sbjct: 76 RQVTDLGDSGVWGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESI----------- 124
Query: 169 IKCDEDESHIAVLYCTVCASHLCEQCASDSHATRTLQKHRRIPLSEKPREKPFCSSHPTN 228
I+CDEDE+H+A +YCTVCA+HLC +C+ +H+T+TL KHRR+PL++KP EK CS H +
Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVH 184
Query: 229 IAEFICLEEHCQTSAQYPPLMCFICKDYGRHKTHKHALVEIEAENLRSYVKNASSNVQHL 288
EF+CLEE CQTS PLMC +CK+YG+H+ HKH+++E EA +R+ + + + ++
Sbjct: 185 AIEFVCLEEGCQTS----PLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF 240
Query: 289 IEEITESVNTVDLVVSKIEG-------NTGPSGTE--PGTGDQARAKVHAYFNHLRESLL 339
EEI++ + +V IEG G + TE PGT + AR+ + AYF L E+L
Sbjct: 241 TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCIRAYFYDLHETLC 300
Query: 340 VQEAAATSAVDMFVRERLGCLVQLHDDMGFWLQEVAKLYLKCEQMILQDDARVLTSGREI 399
QE A S VD VRE+L L Q +DM L EV+ L CE+ + QDD RV+ + +EI
Sbjct: 301 RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHCEKTLQQDDCRVVLAKQEI 360
Query: 400 KEAIETIEKYDTLFNELTPEQIHPDPCIPITFTKDNRVHIGPKMEMRVVTLGLDSA 455
+ET++K F E+ + I D IP+TFTKDNRVHIGPKME+RVVTLGLD A
Sbjct: 361 TRLLETLQKQQQQFTEVA-DHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGA 415
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 78/95 (82%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS+ ++R+ EA +EL KL+ EKEL+DA LL+ ANKQD+ G +VE ITE L+KLCCGR
Sbjct: 480 DSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGR 539
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQLIAAGVNDMS 550
SW+IQ C+A+SG GL+EGLDWLSRQL+AAGV D++
Sbjct: 540 SWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA 574
>sp|Q8BGX0|TRI23_MOUSE E3 ubiquitin-protein ligase TRIM23 OS=Mus musculus GN=Trim23 PE=2
SV=1
Length = 574
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/416 (48%), Positives = 266/416 (63%), Gaps = 32/416 (7%)
Query: 53 GTRTTRILILELALECRVCEDIFLTQGDKVPRLLHCGHTVCLACLLRLPIKDDTITCPFD 112
G+R T ++ + LEC VCED+F QGDKVPRLL CGHTVC CL RLP+ I CPFD
Sbjct: 19 GSRGTAVVKV---LECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFD 75
Query: 113 RQPTPVGYSGVWGLKKNFALLELIEKIQTND----EKATESIPLFSAELHIKCDFSLQLH 168
RQ T +G SGVWGLKKNFALLEL+E++Q A E+I +
Sbjct: 76 RQVTDLGDSGVWGLKKNFALLELLERLQNGHIGQYGAAEEAIGTSGESI----------- 124
Query: 169 IKCDEDESHIAVLYCTVCASHLCEQCASDSHATRTLQKHRRIPLSEKPREKPFCSSHPTN 228
I+CDEDE+H+A +YCTVCA+HLC C+ +H+T+TL KHRR+PL++KP EK C H +
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLAKHRRVPLADKPHEKTMCCQHQVH 184
Query: 229 IAEFICLEEHCQTSAQYPPLMCFICKDYGRHKTHKHALVEIEAENLRSYVKNASSNVQHL 288
EF+CLEE CQTS PLMC +CK+YG+H+ HKH+++E EA +R+ + + + ++
Sbjct: 185 AIEFVCLEEGCQTS----PLMCCVCKEYGKHQGHKHSVLEPEANQIRASILDMAHCIRTF 240
Query: 289 IEEITESVNTVDLVVSKIEG-------NTGPSGTE--PGTGDQARAKVHAYFNHLRESLL 339
EEI++ + +V IEG G + TE PGT + AR+ V AYF+ L E+L
Sbjct: 241 TEEISDYSRKLVGIVQHIEGGEQIVEDGIGMAHTEHVPGTAENARSCVRAYFSDLHETLC 300
Query: 340 VQEAAATSAVDMFVRERLGCLVQLHDDMGFWLQEVAKLYLKCEQMILQDDARVLTSGREI 399
QE A S VD VRE+L L Q +DM L +V+ L CE+ + QDD RV+ + +EI
Sbjct: 301 RQEEMALSVVDAHVREKLIWLRQQQEDMTILLSQVSTACLHCEKTLQQDDCRVVLAKQEI 360
Query: 400 KEAIETIEKYDTLFNELTPEQIHPDPCIPITFTKDNRVHIGPKMEMRVVTLGLDSA 455
+ET++K F E+ + I D IP+TFTKDNRVHIGPKME+RVVTLGLD A
Sbjct: 361 TRLLETLQKQQQQFTEV-ADHIQLDASIPVTFTKDNRVHIGPKMEIRVVTLGLDGA 415
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 78/95 (82%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS+ ++R+ EA +EL KL+ EKEL+DA LL+ ANKQD+ G +VE ITE L+KLCCGR
Sbjct: 480 DSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGR 539
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQLIAAGVNDMS 550
SW+IQ C+A+SG GL+EGLDWLSRQL+AAGV D++
Sbjct: 540 SWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA 574
>sp|Q09654|TRI23_CAEEL E3 ubiquitin-protein ligase arc-1 OS=Caenorhabditis elegans
GN=arc-1 PE=3 SV=3
Length = 539
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 208/395 (52%), Gaps = 27/395 (6%)
Query: 68 CRVCEDIFLTQGD-KVPRLL-HCGHTVCLACLLRLPIKDDTITCPFDRQPTPVGYSGVWG 125
C VC + + + K PR+L CGHT+C C + + ++ +I CPFDR T + +
Sbjct: 6 CNVCNEEYSARDPLKCPRVLTGCGHTICHNCAISIAGRNSSIFCPFDRTATQIPGGDLQN 65
Query: 126 LKKNFALLELIEKIQTND---EKATESIPL--FSAELHIKCDFSLQLHIKCDEDESHIAV 180
LKKNFALLEL+EKI EK+ E + +S E L+++CDED H+AV
Sbjct: 66 LKKNFALLELLEKIADGGGLLEKSGEVVKFDRYSKER--------LLNLECDEDSEHVAV 117
Query: 181 LYCTVCASHLCEQCASDSHATRTLQKHRRIPLSEKPREKPFCSSHPTNIAEFICLEEHCQ 240
+YCTVC S+LCE+C+ +H+T L KHRRIPL+EKP C H + + EF+C E C
Sbjct: 118 IYCTVCDSNLCERCSESTHSTNVLSKHRRIPLTEKPPPLVHCRLHSSYVVEFVCKELSCD 177
Query: 241 TSAQYPPLMCFICKDYGRHKTHKHALVEIEAENLRSYVKNASSNVQHLIEEITESVNTVD 300
T + PLMC +C+DYGRHK H H L+E E E+LR V+ + E I +++++D
Sbjct: 178 TES---PLMCMMCRDYGRHKGHSHVLIEKEVEDLREKVREHLGELSKQSETIGNALHSID 234
Query: 301 LVVSKIEGNTGPSGTEPGTGDQARAKVHAYFNHLRESLLVQEAAATSAVDMFVRERLGCL 360
V+ ++ G E G+ ++ R +V +F LR +L E A VD + R R+ L
Sbjct: 235 SVIHEL-----TPGQEDGSLEETRQEVRNHFRRLRTALDRDEEDAVETVDRYARNRVESL 289
Query: 361 VQLHDDMGFWLQEVAKLYLKCEQMILQDDARVLTSGREIKEAIETIEKYDTLFNELTPEQ 420
+ + ++ ++ ++ + ++L ++ E+ T +Q
Sbjct: 290 QTQKERLEAISSKIGNTCTTLQKALIMERGKILDRKDDLLALAESTAAEPT----AVLDQ 345
Query: 421 IHPDPCIPITFTKDNRVHIGPKMEMRVVTLGLDSA 455
I +F D ++HIG +E RVV LGLD A
Sbjct: 346 SQLSTRIAFSFLNDRKLHIGDFIESRVVLLGLDGA 380
>sp|P61210|ARF1_LOCMI ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2
Length = 182
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P61209|ARF1_DROME ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=2
SV=2
Length = 182
Score = 95.5 bits (236), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|Q10943|ARF12_CAEEL ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans
GN=arf-1.2 PE=2 SV=2
Length = 181
Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P +T+ L+ L R
Sbjct: 93 DSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
SW+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 SWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|Q61LA8|ARF12_CAEBR ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae
GN=arf-1.2 PE=3 SV=3
Length = 181
Score = 95.1 bits (235), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P +T+ L+ L R
Sbjct: 93 DSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
SW+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 SWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84082|ARF2_RAT ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1
Length = 181
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA ELT+++AE EL+DA LL+ NKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|Q8BSL7|ARF2_MOUSE ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2
Length = 181
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA ELT+++AE EL+DA LL+ NKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84081|ARF2_BOVIN ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1
Length = 181
Score = 94.7 bits (234), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA ELT+++AE EL+DA LL+ NKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSL-RQR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P51643|ARF1_XENLA ADP-ribosylation factor 1 OS=Xenopus laevis GN=arf1 PE=2 SV=2
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84079|ARF1_RAT ADP-ribosylation factor 1 OS=Rattus norvegicus GN=Arf1 PE=1 SV=2
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84078|ARF1_MOUSE ADP-ribosylation factor 1 OS=Mus musculus GN=Arf1 PE=1 SV=2
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|Q4R5P2|ARF1_MACFA ADP-ribosylation factor 1 OS=Macaca fascicularis GN=ARF1 PE=2 SV=3
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84077|ARF1_HUMAN ADP-ribosylation factor 1 OS=Homo sapiens GN=ARF1 PE=1 SV=2
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P84080|ARF1_BOVIN ADP-ribosylation factor 1 OS=Bos taurus GN=ARF1 PE=1 SV=2
Length = 181
Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWLS QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLSNQL 177
>sp|P61207|ARF3_TAKRU ADP-ribosylation factor 3 OS=Takifugu rubripes GN=arf3 PE=3 SV=2
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|P61206|ARF3_RAT ADP-ribosylation factor 3 OS=Rattus norvegicus GN=Arf3 PE=1 SV=2
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|Q5R5P7|ARF3_PONAB ADP-ribosylation factor 3 OS=Pongo abelii GN=ARF3 PE=2 SV=3
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|P61205|ARF3_MOUSE ADP-ribosylation factor 3 OS=Mus musculus GN=Arf3 PE=2 SV=2
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|P61204|ARF3_HUMAN ADP-ribosylation factor 3 OS=Homo sapiens GN=ARF3 PE=1 SV=2
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|Q5E9I6|ARF3_BOVIN ADP-ribosylation factor 3 OS=Bos taurus GN=ARF3 PE=2 SV=3
Length = 181
Score = 93.2 bits (230), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RHR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W+IQA A SG+GL+EGLDWL+ QL
Sbjct: 152 NWYIQATCATSGDGLYEGLDWLANQL 177
>sp|O00909|ARF1_DICDI ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1
SV=3
Length = 182
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ EA ELTK++ E EL+DA LL+ NKQD+P +V +T+ +L+ L
Sbjct: 92 VDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRS- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQLIAA 544
R W+IQ+ A SG+GL+EGLDWLS L ++
Sbjct: 151 RKWYIQSTCATSGDGLYEGLDWLSNTLTSS 180
>sp|P91924|ARF_DUGJA ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3
Length = 183
Score = 90.5 bits (223), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
SW+IQA A SG+GL+EGLDWLS L
Sbjct: 152 SWYIQATCATSGDGLYEGLDWLSTTL 177
>sp|P51824|ARF1_SOLTU ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2
Length = 197
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D++R+ EA EL +++AE EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS Q+
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNQI 177
>sp|P51644|ARF4_XENLA ADP-ribosylation factor 4 OS=Xenopus laevis GN=arf4 PE=2 SV=2
Length = 180
Score = 89.4 bits (220), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL K++ E EL+DA LL+ ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEAAEELQKMLQEDELRDAVLLVFANKQDLPNAMAISEMTDKLTLQTL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|Q09623|YS84_CAEEL Uncharacterized RING finger protein ZK945.4 OS=Caenorhabditis
elegans GN=ZK945.4 PE=4 SV=3
Length = 499
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 22/217 (10%)
Query: 67 ECRVCEDIFLTQGDK--VPRLL-HCGHTVCLACLLRLPIKDDTITCPFDRQPTPVGYSGV 123
EC +C + ++ +K +PR+L CGHT+C C ++ + I CPFDR T + V
Sbjct: 9 ECGICGQEY-SEDEKLLIPRILTECGHTICTGCAGKIKGQSSIIACPFDRIETRIWKKDV 67
Query: 124 WGLKKNFALLELIEKIQTNDEKATESIPLFSAELHIKCDFSLQLHIKCDEDESHIAVLYC 183
LKKNF++LE+ ++++ + +E + K + + + CDE+ +H A YC
Sbjct: 68 TRLKKNFSILEIKQEVKDRKNRVI-------SEKNEKKERN--KNGVCDENTNHHASNYC 118
Query: 184 TVCASHLCEQCASDSHATRTLQKHRRIPLSEKPREKPFCSSHPTNIAEFICLEEHCQTSA 243
C + LCE+C + H+ TL H + +S P C HP +C+ + C+
Sbjct: 119 ETCDADLCEECWTWIHSISTLAHHEKKMIS-----TPDCQFHPGKSISLVCMRDRCKKRQ 173
Query: 244 QYPPLMCFIC--KDYGRHKTHKHALVEIEAENLRSYV 278
LMC C H H+H+ + +E LR +
Sbjct: 174 N--RLMCSECFLDKCSDHFEHEHSSLHLELPELRRNI 208
>sp|Q3SZF2|ARF4_BOVIN ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3
Length = 180
Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ E EL K++ E EL+DA LLL ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|P0CM16|ARF_CRYNJ ADP-ribosylation factor OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=ARF PE=1
SV=1
Length = 182
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL ++++E EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQ-R 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
SW+IQA A SG+GL+EGL+WLS L
Sbjct: 152 SWYIQAACATSGDGLYEGLEWLSANL 177
>sp|P0CM17|ARF_CRYNB ADP-ribosylation factor OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=ARF PE=1 SV=1
Length = 182
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ EA EL ++++E EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQ-R 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
SW+IQA A SG+GL+EGL+WLS L
Sbjct: 152 SWYIQAACATSGDGLYEGLEWLSANL 177
>sp|P22274|ARF_CANAL ADP-ribosylation factor OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ARF1 PE=3 SV=4
Length = 179
Score = 88.2 bits (217), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D++R+ EA EL ++ E ELKDA LL+LANKQD+P ITE L+ + R
Sbjct: 93 DSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSI-MNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
W IQA A +G+GL+EGL+WLS Q+
Sbjct: 152 PWFIQATCATTGDGLYEGLEWLSNQV 177
>sp|P61751|ARF4_RAT ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2
Length = 180
Score = 87.4 bits (215), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ E A L K++ E EL+DA LLL ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|P61750|ARF4_MOUSE ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2
Length = 180
Score = 87.4 bits (215), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ E A L K++ E EL+DA LLL ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|P51821|ARF1_CHLRE ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2
SV=2
Length = 181
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS L
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNL 177
>sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF
PE=2 SV=2
Length = 181
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|Q06396|ARF1_ORYSJ ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica
GN=Os01g0813400 PE=2 SV=3
Length = 181
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|Q94231|ARF11_CAEEL ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans
GN=arf-1.1 PE=3 SV=3
Length = 179
Score = 85.9 bits (211), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS+D ER+PEA EL L+AE EL D+ LL+ ANKQD+P + +T+ DL L R
Sbjct: 93 DSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSL-KNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
W I NA SG+GL+EGL W+ +Q+
Sbjct: 152 EWFICGTNAHSGQGLYEGLMWVKKQM 177
>sp|P36579|ARF1_SCHPO ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=arf1 PE=2 SV=2
Length = 180
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRH- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQA A SG+GL+EGL+WLS L
Sbjct: 151 RQWYIQATCATSGDGLYEGLEWLSTNL 177
>sp|P49702|ARF5_CHICK ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2
Length = 180
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ E+ EL K++ E EL+DA LL+ ANKQD+P V +T+ L L
Sbjct: 92 VDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRS- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R+W++QA A G GL++GLDWLS +L
Sbjct: 151 RTWYVQATCATQGTGLYDGLDWLSHEL 177
>sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3
Length = 181
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|Q5RCF1|ARF4_PONAB ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3
Length = 180
Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ E EL K++ EL+DA LLL ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|P18085|ARF4_HUMAN ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3
Length = 180
Score = 85.1 bits (209), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D+ER+ E EL K++ EL+DA LLL ANKQD+P + +T+ L L R
Sbjct: 93 DSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSL-RNR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
+W++QA A G GL+EGLDWLS +L
Sbjct: 152 TWYVQATCATQGTGLYEGLDWLSNEL 177
>sp|P36397|ARF1_ARATH ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2
Length = 181
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|P0DH91|ARF2B_ARATH ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2
SV=1
Length = 181
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ-R 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 152 HWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|Q9LQC8|ARF2A_ARATH ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2
SV=2
Length = 181
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L R
Sbjct: 93 DSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQ-R 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQL 541
W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 152 HWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|Q7RVM2|ARF_NEUCR ADP-ribosylation factor OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=NCU08340 PE=3 SV=3
Length = 185
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L L
Sbjct: 95 VDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQ- 153
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
RSW+IQA A +G+GL EGLDWLS +L
Sbjct: 154 RSWYIQATCATTGDGLFEGLDWLSTEL 180
>sp|P34727|ARF_AJECA ADP-ribosylation factor OS=Ajellomyces capsulatus GN=ARF PE=1 SV=3
Length = 183
Score = 84.3 bits (207), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 456 DSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCGR 515
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P + IT+ L L R
Sbjct: 93 DSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSL-TRR 151
Query: 516 SWHIQACNAQSGEGLHEGLDWLSRQLIAAG 545
+W+IQ+ A +G+GL+EGL+WL+ L AG
Sbjct: 152 AWYIQSTCATTGDGLYEGLEWLANALKKAG 181
>sp|O23778|ARF1_CATRO ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3
Length = 181
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D++R+ EA EL +++ E EL+DA LL+ ANKQD+P IT+ L+ L
Sbjct: 92 VDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQ- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R W+IQ+ A SGEGL+EGLDWLS +
Sbjct: 151 RHWYIQSTCATSGEGLYEGLDWLSNNI 177
>sp|P84083|ARF5_RAT ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2
Length = 180
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 455 ADSADKERLPEALAELTKLIAEKELKDAALLLLANKQDIPGCETVESITEAFDLYKLCCG 514
DS D+ER+ E+ EL K++ E EL+DA LL+ ANKQD+P V +T+ L L
Sbjct: 92 VDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRS- 150
Query: 515 RSWHIQACNAQSGEGLHEGLDWLSRQL 541
R+W++QA A G GL++GLDWLS +L
Sbjct: 151 RTWYVQATCATQGTGLYDGLDWLSHEL 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 205,220,044
Number of Sequences: 539616
Number of extensions: 8554981
Number of successful extensions: 30511
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 444
Number of HSP's that attempted gapping in prelim test: 28771
Number of HSP's gapped (non-prelim): 1971
length of query: 550
length of database: 191,569,459
effective HSP length: 123
effective length of query: 427
effective length of database: 125,196,691
effective search space: 53458987057
effective search space used: 53458987057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)