Query psy15734
Match_columns 314
No_of_seqs 188 out of 1514
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 20:03:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15734.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15734hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 3.7E-35 1.3E-39 263.4 26.4 271 18-306 2-326 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 9E-35 3.1E-39 261.0 28.1 270 19-307 195-513 (570)
3 2rik_A Titin; I-SET IG fold, p 100.0 3E-33 1E-37 229.4 27.7 236 19-271 3-283 (284)
4 3qs7_E FL cytokine receptor; i 100.0 8.9E-32 3.1E-36 232.3 24.3 264 22-306 49-361 (423)
5 1qz1_A Neural cell adhesion mo 100.0 1.1E-31 3.9E-36 220.8 23.8 237 21-272 2-290 (291)
6 2ec8_A MAST/stem cell growth f 100.0 1.5E-31 5.1E-36 237.9 24.3 274 15-307 108-442 (524)
7 2yd9_A Receptor-type tyrosine- 100.0 5.5E-31 1.9E-35 218.1 24.4 232 19-274 4-293 (304)
8 2ec8_A MAST/stem cell growth f 100.0 1E-30 3.5E-35 232.5 27.8 268 12-306 27-349 (524)
9 3kld_A Contactin 4, axcam, BIG 100.0 8.9E-32 3.1E-36 230.1 18.0 266 20-307 4-331 (384)
10 2wim_A N-CAM 2, NCAM2, neural 100.0 7.9E-31 2.7E-35 215.8 21.7 236 20-275 3-287 (291)
11 3laf_A Deleted in colorectal c 100.0 7.3E-31 2.5E-35 225.8 21.6 268 17-307 17-348 (403)
12 2rcj_C Light chain; immunoglob 100.0 6.8E-30 2.3E-34 227.2 26.2 275 25-307 4-359 (523)
13 3p3y_A Neurofascin; IG domains 100.0 6.2E-31 2.1E-35 226.3 18.1 270 17-307 12-348 (404)
14 3dmk_A DOWN syndrome cell adhe 100.0 1.6E-29 5.4E-34 236.2 28.9 239 21-271 246-525 (816)
15 2o26_X MAST/stem cell growth f 100.0 1.1E-29 3.8E-34 208.9 23.8 229 19-274 10-290 (290)
16 1bih_A Hemolin; insect immunit 100.0 2.1E-30 7.1E-35 222.4 19.1 270 18-307 3-345 (395)
17 2v5m_A Dscam; neurobiology SPL 100.0 3.6E-30 1.2E-34 220.4 19.9 265 21-307 3-343 (388)
18 3dmk_A DOWN syndrome cell adhe 100.0 1.9E-29 6.4E-34 235.7 25.6 272 19-307 427-750 (816)
19 1cs6_A Axonin-1; neural cell a 100.0 4.5E-30 1.5E-34 219.4 19.1 263 20-307 3-330 (382)
20 3laf_A Deleted in colorectal c 100.0 1.1E-29 3.9E-34 218.3 21.2 240 15-273 115-402 (403)
21 1e07_A Carcinoembryonic antige 100.0 1.6E-28 5.5E-33 223.6 28.8 258 26-307 294-595 (642)
22 4fom_A Poliovirus receptor-rel 100.0 2.5E-30 8.7E-35 214.5 15.4 235 30-275 8-303 (308)
23 3qs9_E FL cytokine receptor; i 100.0 3.2E-29 1.1E-33 221.9 23.0 257 29-307 56-362 (527)
24 2y25_A Myomesin; structural pr 100.0 2.3E-30 7.8E-35 215.5 14.8 235 19-273 5-316 (317)
25 1e07_A Carcinoembryonic antige 100.0 3.6E-28 1.2E-32 221.2 28.7 262 21-307 112-417 (642)
26 3mjg_X Beta-type platelet-deri 100.0 7.6E-29 2.6E-33 203.8 21.9 238 22-275 1-281 (289)
27 1wio_A CD4, T-cell surface gly 100.0 2.3E-29 7.9E-34 213.6 19.2 257 30-306 3-318 (363)
28 2wng_A Tyrosine-protein phosph 100.0 8.8E-29 3E-33 207.0 22.5 243 21-268 3-316 (327)
29 3ejj_X Macrophage colony-stimu 100.0 2.4E-28 8.1E-33 200.7 22.5 232 20-274 3-283 (289)
30 4fqp_A Poliovirus receptor; im 100.0 1.4E-28 4.7E-33 204.6 21.0 238 24-275 3-307 (313)
31 3qs9_E FL cytokine receptor; i 100.0 1.4E-28 4.7E-33 217.8 22.1 243 30-306 148-442 (527)
32 3u83_A Poliovirus receptor-rel 100.0 2.2E-28 7.4E-33 204.9 21.5 244 21-275 14-323 (331)
33 1qgc_4 Protein (immunoglobulin 100.0 9.8E-28 3.4E-32 208.6 24.6 278 23-306 3-380 (438)
34 2ocw_A Polymeric-immunoglobuli 100.0 7.1E-27 2.4E-31 210.5 30.7 249 11-271 102-440 (585)
35 2y23_A Myomesin; structural pr 100.0 3.9E-28 1.3E-32 201.5 20.6 223 28-270 8-310 (312)
36 2rcj_C Light chain; immunoglob 100.0 2.5E-27 8.7E-32 210.6 26.5 278 19-307 112-463 (523)
37 1ry7_B FGFR-3, fibroblast grow 100.0 5.8E-30 2E-34 214.8 8.7 237 26-277 13-332 (334)
38 3kld_A Contactin 4, axcam, BIG 100.0 1.9E-27 6.6E-32 203.3 22.5 222 28-271 109-382 (384)
39 3p3y_A Neurofascin; IG domains 100.0 1.3E-27 4.5E-32 205.5 20.9 239 15-272 109-403 (404)
40 3rjd_A High affinity immunoglo 100.0 4.5E-27 1.5E-31 190.3 22.7 203 21-262 1-249 (262)
41 4dep_C Interleukin-1 receptor 100.0 3E-28 1E-32 205.6 15.3 242 26-273 12-334 (349)
42 4dkd_C Macrophage colony-stimu 100.0 9.5E-28 3.2E-32 197.4 17.9 231 20-274 3-283 (292)
43 2v5m_A Dscam; neurobiology SPL 100.0 6.5E-28 2.2E-32 206.4 17.6 230 17-270 99-387 (388)
44 1igt_B IGG2A intact antibody - 100.0 9.1E-27 3.1E-31 202.9 23.8 277 26-306 5-383 (444)
45 3o4o_C Interleukin-1 receptor 100.0 4.5E-29 1.5E-33 209.8 7.2 241 19-271 16-334 (339)
46 1itb_B Type 1 interleukin-1 re 100.0 6.5E-28 2.2E-32 200.6 12.9 233 27-271 11-313 (315)
47 2j8h_A Titin, connectin; cardi 100.0 1.9E-26 6.6E-31 178.5 20.4 189 20-271 3-196 (197)
48 1z7z_I Intercellular adhesion 100.0 9.2E-27 3.2E-31 203.2 20.3 224 16-273 80-368 (450)
49 2ocw_A Polymeric-immunoglobuli 99.9 1.4E-25 4.9E-30 202.0 27.5 276 26-307 5-371 (585)
50 3oq3_B IFN-alpha/beta binding 99.9 1.7E-26 5.8E-31 193.3 19.3 228 24-270 32-328 (329)
51 1cs6_A Axonin-1; neural cell a 99.9 2.1E-26 7.1E-31 196.7 20.2 224 27-271 107-381 (382)
52 1z7z_I Intercellular adhesion 99.9 7.3E-26 2.5E-30 197.5 24.0 248 24-305 2-315 (450)
53 3lcy_A Titin; A-BAND, IG tande 99.9 1.1E-25 3.6E-30 174.2 20.0 189 19-272 5-196 (197)
54 2a38_A Titin; Z1Z2, structural 99.9 1E-25 3.5E-30 174.0 19.7 186 20-270 4-193 (194)
55 2yd1_A Tyrosine-protein phosph 99.9 3E-25 1E-29 174.0 22.5 195 19-274 4-202 (212)
56 1hzh_H IGG, immunoglobulin hea 99.9 4.1E-26 1.4E-30 199.5 19.2 276 27-306 6-392 (457)
57 1iga_A IGA1; immunoglobulin; N 99.9 1.1E-24 3.6E-29 191.4 27.9 276 25-307 5-388 (475)
58 2nzi_A Titin; IG-domain, FNIII 99.9 6.7E-25 2.3E-29 181.5 25.0 226 20-308 3-248 (305)
59 1epf_A NCAM, protein (neural c 99.9 1.8E-25 6.2E-30 172.1 19.1 185 21-270 2-189 (191)
60 2wv3_A Neuroplastin; igcam, me 99.9 5.5E-25 1.9E-29 169.4 21.2 183 20-271 2-189 (190)
61 3qs7_E FL cytokine receptor; i 99.9 2.2E-25 7.6E-30 192.4 20.7 235 13-276 132-418 (423)
62 4fa8_A Secreted protein BARF1; 99.9 1.1E-25 3.7E-30 174.6 16.8 180 30-264 2-194 (203)
63 1igy_B IGG1 intact antibody MA 99.9 1.9E-27 6.4E-32 206.6 5.9 278 26-306 4-373 (434)
64 2oz4_A Intercellular adhesion 99.9 5E-25 1.7E-29 178.7 19.3 208 21-272 6-264 (265)
65 2v44_A NCAM2, neural cell adhe 99.9 1.3E-24 4.5E-29 167.0 20.5 180 23-271 4-186 (189)
66 2v5t_A NCAM2, N-CAM 2, neural 99.9 2.4E-25 8.3E-30 171.1 16.2 184 21-272 2-188 (189)
67 2yd6_A PTPRD protein; hydrolas 99.9 1E-24 3.6E-29 170.9 20.0 191 19-273 4-205 (212)
68 1bih_A Hemolin; insect immunit 99.9 3.1E-25 1.1E-29 190.1 18.0 225 28-270 107-394 (395)
69 2iep_A Muscle-specific kinase 99.9 2.9E-25 9.8E-30 171.1 15.6 186 18-274 4-192 (192)
70 3v2a_R Vascular endothelial gr 99.9 2.7E-26 9.3E-31 213.0 11.4 275 27-307 230-585 (772)
71 2va4_A NCAM2, N-CAM 2, neural 99.9 3.8E-24 1.3E-28 164.8 20.7 186 21-270 2-191 (192)
72 3rbs_A Myomesin-1; immunoglobu 99.9 1.9E-24 6.5E-29 168.4 18.5 199 22-270 4-205 (207)
73 2c5d_C AXL oncogene, tyrosine- 99.9 3.8E-24 1.3E-28 165.3 18.3 180 20-270 1-191 (195)
74 2jll_A NCAM2, neural cell adhe 99.9 4.7E-23 1.6E-27 176.3 26.3 213 21-295 1-218 (389)
75 3vh8_G Killer cell immunoglobu 99.9 1E-24 3.4E-29 181.5 15.1 229 17-274 20-315 (316)
76 1rhf_A Tyrosine-protein kinase 99.9 7.7E-24 2.6E-28 161.7 18.5 175 21-270 2-181 (182)
77 1f97_A Junction adhesion molec 99.9 9E-24 3.1E-28 165.2 19.2 197 22-273 2-208 (212)
78 3grw_A Fibroblast growth facto 99.9 6.1E-24 2.1E-28 169.7 17.1 198 20-276 10-222 (241)
79 1zvo_C Myeloma immunoglobulin 99.9 2.2E-22 7.4E-27 178.1 27.1 277 27-306 6-438 (512)
80 3ojm_B Fibroblast growth facto 99.9 2.3E-24 8E-29 170.9 12.9 199 19-276 13-225 (231)
81 2r15_A Myomesin-1; sarcomeric 99.9 2.7E-23 9.2E-28 162.6 18.7 195 33-273 14-211 (212)
82 3sbw_C Programmed cell death 1 99.9 1E-22 3.4E-27 160.6 21.8 194 24-273 4-212 (222)
83 1za6_B IGG heavy chain; immuno 99.9 5.5E-23 1.9E-27 173.0 21.4 233 26-262 5-331 (344)
84 3v2a_R Vascular endothelial gr 99.9 3E-24 1E-28 199.3 14.8 271 20-306 30-365 (772)
85 3jz7_A MCAR, CAR, coxsackievir 99.9 5.2E-24 1.8E-28 166.8 13.3 190 24-272 3-212 (214)
86 3bp6_B Programmed cell death 1 99.9 7.4E-23 2.5E-27 159.0 19.3 183 23-273 4-194 (202)
87 2vr9_A Roundabout 1, ROBO; imm 99.9 1.5E-23 5.3E-28 164.7 14.8 196 18-272 6-206 (217)
88 3sgj_C Human FCG3A receptor; r 99.9 2.8E-23 9.4E-28 161.6 16.0 171 19-276 5-178 (204)
89 1qgc_4 Protein (immunoglobulin 99.9 2.7E-23 9.3E-28 180.6 17.7 236 21-268 116-435 (438)
90 4f80_A Butyrophilin subfamily 99.9 2E-22 6.9E-27 159.4 21.1 192 24-271 7-212 (226)
91 3mj8_L Stimulatory hamster ant 99.9 3.8E-23 1.3E-27 162.0 16.1 190 22-266 2-207 (213)
92 3k0w_A Mucosa-associated lymph 99.9 8.6E-23 2.9E-27 160.6 18.1 186 18-273 15-203 (218)
93 2x1w_L Vascular endothelial gr 99.9 1.2E-22 4E-27 159.2 18.6 187 27-274 13-209 (213)
94 1nbq_A JAM, junctional adhesio 99.9 4.8E-24 1.6E-28 166.4 10.6 196 21-271 4-208 (209)
95 2ny1_B T-cell surface glycopro 99.9 5.7E-23 1.9E-27 157.2 14.6 173 30-276 4-183 (184)
96 2fbo_J V1V2;, variable region- 99.9 5E-23 1.7E-27 165.3 14.5 139 24-165 5-175 (250)
97 2v9r_A Roundabout homolog 1; p 99.9 3.5E-23 1.2E-27 161.9 13.2 192 19-274 7-204 (212)
98 3b5h_A Cervical EMMPRIN, HAB18 99.9 6E-22 2E-26 151.5 19.3 170 30-271 7-182 (184)
99 1fnl_A Low affinity immunoglob 99.9 3.7E-22 1.3E-26 151.5 17.7 168 18-272 4-174 (175)
100 2ifg_A High affinity nerve gro 99.9 1.3E-23 4.4E-28 177.1 10.5 188 17-273 154-346 (347)
101 1f2q_A High affinity immunoglo 99.9 1E-22 3.6E-27 154.6 14.5 170 19-275 2-174 (176)
102 1ugn_A LIR1, leukocyte immunog 99.9 2.1E-22 7.2E-27 155.9 15.9 183 19-271 3-197 (198)
103 1vca_A VCAM-D1,2, human vascul 99.9 6.8E-22 2.3E-26 153.5 18.7 183 27-275 7-200 (202)
104 3s97_C Contactin-1; carbonic a 99.9 2.2E-22 7.5E-27 156.0 15.8 175 26-271 13-200 (201)
105 2d3v_A Leukocyte immunoglobuli 99.9 1.6E-22 5.4E-27 156.4 14.7 126 19-161 3-134 (196)
106 4frw_A Poliovirus receptor-rel 99.9 5.7E-22 2E-26 155.4 18.0 192 26-272 4-211 (218)
107 3p2t_A Leukocyte immunoglobuli 99.9 4E-22 1.4E-26 154.1 16.2 180 20-270 4-194 (196)
108 1wio_A CD4, T-cell surface gly 99.9 1E-22 3.5E-27 172.6 14.1 197 31-270 106-361 (363)
109 4i0k_A CD276 antigen; immunogl 99.9 1.2E-22 4.2E-27 160.1 13.1 194 29-274 3-208 (222)
110 3s96_B 3B5H10 FAB light chain; 99.9 4.4E-22 1.5E-26 156.4 16.3 191 22-266 2-214 (218)
111 3r4d_A CEA-related cell adhesi 99.9 2.2E-22 7.6E-27 156.9 14.3 185 27-274 5-202 (208)
112 2wqr_A IG epsilon chain C regi 99.9 2.7E-22 9.2E-27 167.3 14.6 214 37-261 25-309 (323)
113 2p1y_A Bispecific alpha/beta T 99.9 7.9E-21 2.7E-25 151.4 22.3 195 23-259 2-222 (238)
114 3nl4_L Antigen binding fragmen 99.9 8.4E-22 2.9E-26 154.3 16.3 181 22-256 2-198 (213)
115 1hzh_H IGG, immunoglobulin hea 99.9 3.1E-22 1E-26 174.9 15.0 232 21-262 132-444 (457)
116 1uct_A Immunoglobulin alpha FC 99.9 6.5E-22 2.2E-26 155.3 15.4 191 17-282 5-208 (218)
117 3mj6_A Junctional adhesion mol 99.9 6.1E-22 2.1E-26 160.7 15.7 218 22-277 6-242 (268)
118 3ry4_A Low affinity immunoglob 99.9 1.4E-21 4.7E-26 147.5 15.9 163 21-270 4-169 (170)
119 3r06_A Anti-mouse CD3epsilon a 99.9 1.5E-21 5.1E-26 152.9 16.4 189 22-264 2-205 (213)
120 3d9a_L Light chain of hyhel10 99.9 2.6E-21 9.1E-26 151.4 16.8 191 24-266 4-207 (213)
121 1oll_A NK receptor; immune sys 99.9 5E-21 1.7E-25 146.9 17.8 176 20-271 3-187 (188)
122 3tv3_L PGT128 light chain, IG 99.9 9.4E-22 3.2E-26 153.8 14.0 188 22-266 2-205 (211)
123 1c1e_H Catalytic antibody 1E9 99.9 2.6E-21 9E-26 152.2 16.2 85 26-110 5-102 (219)
124 1nqb_A Single-chain antibody f 99.9 1.5E-20 5E-25 151.5 20.8 204 26-273 5-234 (256)
125 3sob_L Antibody light chain; b 99.9 2.8E-21 9.4E-26 153.8 16.4 196 20-267 23-231 (237)
126 2gi7_A GPVI protein; IG-like d 99.9 2.5E-21 8.5E-26 148.1 15.3 158 18-260 5-168 (184)
127 3juy_B 3B3 single chain varian 99.9 2.3E-20 7.9E-25 150.4 21.8 141 19-161 4-186 (256)
128 1hng_A CD2; T lymphocyte adhes 99.9 1.3E-21 4.4E-26 148.5 13.1 164 29-270 4-174 (176)
129 1lk3_L 9D7 light chain; antige 99.9 7.2E-21 2.5E-25 148.7 17.6 185 24-263 4-203 (210)
130 3umt_A SCFV heavy chain and li 99.9 2.5E-20 8.7E-25 150.2 21.1 204 27-273 8-246 (256)
131 3pv7_A B7-H6, IG-like domain-c 99.9 2.2E-21 7.5E-26 155.6 14.5 198 26-270 8-224 (248)
132 3uzq_A Anti-dengue MAB 4E11; d 99.9 3.5E-20 1.2E-24 149.1 21.4 207 24-273 4-245 (253)
133 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.9 2.1E-20 7.1E-25 150.7 20.0 137 22-161 4-172 (256)
134 1q9r_B S25-2 FAB (IGG1K) heavy 99.9 4.5E-21 1.6E-25 151.2 15.7 187 27-268 6-219 (222)
135 1q0x_L FAB 9B1, light chain; a 99.9 1.1E-20 3.8E-25 147.8 17.6 187 24-265 4-208 (212)
136 1igt_B IGG2A intact antibody - 99.9 1.7E-21 5.8E-26 169.6 14.2 216 33-260 135-433 (444)
137 2ghw_B Anti-SARS SCFV antibody 99.9 2.5E-20 8.5E-25 149.4 19.8 138 23-161 5-171 (247)
138 1igy_B IGG1 intact antibody MA 99.9 6.9E-22 2.4E-26 171.6 11.4 230 21-261 119-424 (434)
139 2rik_A Titin; I-SET IG fold, p 99.9 1.7E-20 5.9E-25 153.4 19.0 178 122-307 4-228 (284)
140 2pet_A Lutheran blood group gl 99.9 2.6E-21 8.8E-26 153.4 13.5 137 25-166 4-160 (231)
141 2c1o_A IGK-C protein; FAB frag 99.9 7.6E-21 2.6E-25 153.0 16.3 189 20-262 37-245 (254)
142 1qok_A MFE-23 recombinant anti 99.9 7.5E-20 2.6E-24 149.5 21.8 206 24-272 29-268 (282)
143 3auv_A SC-DSFV derived from th 99.9 3E-20 1E-24 151.4 19.1 140 20-161 11-172 (276)
144 2if7_A SLAM family member 6; N 99.9 1.8E-20 6.2E-25 144.4 16.7 130 26-161 3-146 (193)
145 3esu_F Antibody 14B7* light ch 99.9 3.7E-20 1.3E-24 148.6 19.1 138 21-161 4-169 (250)
146 2zg1_A Sialic acid-binding IG- 99.9 1.4E-20 4.9E-25 147.3 16.2 182 26-270 5-213 (214)
147 3bkj_L WO2 IGG2A FAB fragment 99.9 1E-20 3.5E-25 152.1 15.6 189 20-262 33-241 (252)
148 2znx_A SCFV; fluorotryptohpan, 99.9 4.7E-20 1.6E-24 147.3 19.4 138 22-161 2-160 (242)
149 3gkz_A Anti-methamphetamine si 99.9 6.3E-20 2.2E-24 147.9 20.2 139 23-161 10-178 (257)
150 1mju_H Immunoglobulin MS6-12; 99.9 1.2E-20 4.2E-25 149.2 15.6 192 26-273 5-218 (227)
151 2xzc_L FAB A.17 light chain; i 99.9 2E-20 6.8E-25 146.8 16.4 184 28-265 7-208 (216)
152 4dzb_B Vbeta2 (MAIT T cell rec 99.9 1.5E-20 5.1E-25 150.5 15.7 190 22-263 2-222 (246)
153 1nkr_A P58-CL42 KIR; inhibitor 99.9 5.6E-20 1.9E-24 142.6 18.5 129 18-161 5-142 (201)
154 3d9a_H Heavy chain of hyhel10 99.9 1.4E-20 4.7E-25 147.1 14.8 184 27-265 6-207 (210)
155 1dee_B IGM RF 2A2; FAB-IBP com 99.9 6.9E-20 2.4E-24 144.5 18.8 187 28-266 7-221 (223)
156 1pz5_B Heavy chain of FAB (SYA 99.9 1.7E-20 5.8E-25 147.6 15.3 185 27-267 6-216 (220)
157 3omz_A Human vdelta1 gamma del 99.9 4.7E-20 1.6E-24 148.9 18.0 140 22-161 3-173 (259)
158 1p6f_A NKP46, natural cytotoxi 99.9 8E-20 2.7E-24 145.6 19.0 182 18-275 4-194 (242)
159 1f3r_B FV antibody fragment; I 99.8 9.1E-20 3.1E-24 147.0 19.2 135 27-161 6-175 (257)
160 2yd9_A Receptor-type tyrosine- 99.8 2.1E-20 7.2E-25 154.5 15.7 178 122-307 5-241 (304)
161 2fbj_H IGA-kappa J539 FAB (hea 99.8 8.1E-20 2.8E-24 143.8 18.1 186 28-263 7-212 (220)
162 2gjj_A A21 single-chain antibo 99.8 2.3E-19 7.7E-24 145.2 21.0 140 20-161 4-176 (264)
163 1moe_A Anti-CEA MAB T84.66; an 99.8 9.7E-20 3.3E-24 145.2 18.6 138 23-162 3-158 (240)
164 1hxm_B Gamma-delta T-cell rece 99.8 6.6E-20 2.3E-24 146.4 17.4 197 22-270 2-227 (242)
165 4fmk_A Poliovirus receptor-rel 99.8 7.2E-20 2.4E-24 144.1 16.9 189 28-270 8-215 (225)
166 1iga_A IGA1; immunoglobulin; N 99.8 5.2E-19 1.8E-23 155.2 24.0 218 34-261 139-443 (475)
167 1svz_A Immunoglobulin;, single 99.8 2.8E-19 9.6E-24 143.2 20.4 137 23-161 3-165 (247)
168 1nfd_E H57 FAB; complex (immun 99.8 3.7E-21 1.3E-25 150.5 9.1 184 28-265 6-205 (212)
169 4ei6_B Vbeta16 XV19 type II na 99.8 7.3E-20 2.5E-24 146.4 16.9 189 22-263 3-221 (245)
170 1b6u_A KIR2DL3, P58 killer cel 99.8 7.4E-20 2.5E-24 146.9 16.8 185 19-274 5-203 (257)
171 3nfj_J T cell receptor beta ch 99.8 3.3E-20 1.1E-24 148.5 14.4 189 24-264 4-222 (245)
172 1op3_H FAB 2G12, heavy chain; 99.8 4.8E-20 1.7E-24 145.6 14.8 182 27-263 6-216 (225)
173 3q5y_A TCR N15 beta; IG, T cel 99.8 2.4E-19 8.1E-24 143.0 19.0 190 22-264 3-216 (240)
174 1qz1_A Neural cell adhesion mo 99.8 1.3E-19 4.3E-24 148.7 17.0 170 132-307 9-232 (291)
175 3m8o_H Immunoglobulin A1 heavy 99.8 4.1E-19 1.4E-23 139.8 19.3 182 27-262 6-213 (221)
176 3ux9_B SCFV antibody; five hel 99.8 1.7E-19 5.9E-24 145.3 17.1 97 27-124 8-115 (256)
177 3eow_R Poliovirus receptor; im 99.8 1.4E-20 4.7E-25 148.3 10.2 188 27-269 5-209 (221)
178 1sy6_A T-cell surface glycopro 99.8 6.1E-20 2.1E-24 142.6 13.6 186 33-271 15-203 (204)
179 1dr9_A B7-1 (CD80), T lymphocy 99.8 1.9E-19 6.6E-24 139.5 16.4 126 30-161 3-143 (201)
180 3pl6_D MBP peptide / T-cell re 99.8 2.3E-19 7.8E-24 145.5 17.1 199 20-264 25-244 (268)
181 3bae_H WO2 IGG2A FAB fragment 99.8 1.2E-19 4.2E-24 143.6 14.9 186 28-268 7-222 (228)
182 1dn0_B IGM-kappa cold agglutin 99.8 4.3E-19 1.5E-23 140.8 18.0 194 27-272 6-227 (232)
183 3qib_D 2B4 beta chain; IG doma 99.8 2.3E-19 7.9E-24 145.7 15.9 198 21-264 27-247 (270)
184 2dru_A Chimera of CD48 antigen 99.8 2.8E-19 9.5E-24 136.0 15.3 123 28-161 6-136 (180)
185 2wbj_D OB TCR; transmembrane, 99.8 3.2E-19 1.1E-23 145.6 16.6 89 20-108 23-121 (279)
186 1jbj_A CD3 epsilon and gamma e 99.8 5.9E-20 2E-24 140.6 11.1 169 31-262 9-179 (186)
187 3bqu_C 3H6 FAB light chain; be 99.8 5.3E-21 1.8E-25 151.9 5.3 188 20-261 22-224 (233)
188 3liz_H 4C3 monoclonal antibody 99.8 2.6E-19 8.8E-24 144.0 14.4 190 27-271 6-219 (253)
189 2j6e_L IGM, FAB light chain; a 99.8 3.5E-20 1.2E-24 147.2 9.1 192 21-267 20-230 (234)
190 3fku_X Neutralizing antibody F 99.8 8.9E-19 3.1E-23 142.9 17.2 192 23-259 3-234 (280)
191 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.9E-18 6.6E-23 140.1 19.0 140 20-161 14-189 (268)
192 2xqy_G A13-D6.3 monoclonal ant 99.8 8.2E-19 2.8E-23 141.5 16.6 182 26-262 11-215 (261)
193 2gki_A Nuclease; anti-DNA anti 99.8 1.4E-18 4.8E-23 142.5 17.9 136 27-162 28-202 (291)
194 1ccz_A Protein (CD58); LFA-3, 99.8 6.8E-19 2.3E-23 132.6 14.6 120 29-161 3-126 (171)
195 3nl4_H Antigen binding fragmen 99.8 3.6E-19 1.2E-23 139.5 13.5 83 26-109 4-97 (215)
196 1ypz_F T-cell receptor gamma c 99.8 1.7E-18 5.9E-23 137.1 17.1 85 24-108 4-100 (230)
197 2rgs_A I, IG gamma-2B heavy ch 99.8 1.2E-19 4.1E-24 142.5 10.0 183 20-262 8-206 (218)
198 1bec_A 14.3.D T cell antigen r 99.8 1.9E-18 6.6E-23 137.5 16.9 85 24-109 2-94 (238)
199 2vol_A Murine IGG FC; FC, zinc 99.8 1.7E-19 5.7E-24 140.6 9.9 178 24-261 5-197 (207)
200 3bn9_D E2 FAB heavy chain; ant 99.8 5.1E-19 1.7E-23 142.2 12.7 83 27-109 6-101 (257)
201 1c5d_H Monoclonal antibody aga 99.8 2.3E-18 7.9E-23 134.9 15.6 133 27-161 6-160 (215)
202 3rjd_A High affinity immunoglo 99.8 1.9E-18 6.7E-23 139.3 15.4 162 132-307 8-207 (262)
203 3knb_B Obscurin-like protein 1 99.8 5.1E-19 1.7E-23 122.2 10.2 95 175-274 13-107 (107)
204 3to4_D NKT vbeta2 (mouse varia 99.8 2.1E-18 7.2E-23 138.6 14.7 183 25-261 5-219 (253)
205 3qhz_H Human monoclonal antibo 99.8 1.4E-18 4.9E-23 137.8 13.3 189 28-270 7-227 (232)
206 1hnf_A CD2; T lymphocyte adhes 99.8 5.4E-18 1.9E-22 128.7 15.7 122 28-161 6-136 (182)
207 1oga_E TRBC1, T-cell receptor 99.8 1.8E-18 6.1E-23 138.9 13.6 189 22-263 4-220 (252)
208 2wim_A N-CAM 2, NCAM2, neural 99.8 1.3E-18 4.6E-23 142.6 13.0 176 123-307 4-230 (291)
209 3tv3_H PGT128 heavy chain, IG 99.8 2.2E-18 7.6E-23 137.2 13.4 83 26-108 5-107 (239)
210 1zvo_C Myeloma immunoglobulin 99.8 1.3E-16 4.4E-21 141.1 25.9 226 35-270 149-503 (512)
211 3knb_A Titin; IG-like, titin, 99.8 1.7E-18 6E-23 118.0 10.1 95 175-272 5-99 (100)
212 3n9g_H FAB fragment of MAB CR4 99.8 1.1E-17 3.9E-22 132.4 16.4 189 28-271 7-224 (230)
213 3u2s_H PG9 heavy chain; greek 99.8 5E-18 1.7E-22 135.8 14.1 219 26-271 4-237 (248)
214 1gsm_A Madcam-1, mucosal addre 99.8 6.3E-17 2.2E-21 124.4 18.2 120 27-167 12-140 (210)
215 3mtr_A N-CAM-1, NCAM-1, neural 99.8 3.3E-17 1.1E-21 128.3 16.0 187 19-274 17-211 (215)
216 2yd1_A Tyrosine-protein phosph 99.8 5.1E-17 1.8E-21 126.9 16.3 95 175-272 6-102 (212)
217 3oq3_B IFN-alpha/beta binding 99.7 1.2E-17 4.1E-22 139.5 13.1 165 133-306 37-267 (329)
218 1i1c_A IGG2A, IG gamma-2A chai 99.7 4E-18 1.4E-22 135.6 9.0 180 23-261 18-211 (239)
219 3o3u_N Maltose-binding peripla 99.7 2.7E-17 9.4E-22 147.9 15.2 184 28-262 373-567 (581)
220 3mlr_H Human monoclonal anti-H 99.7 4.2E-17 1.4E-21 128.7 14.4 81 28-108 7-100 (226)
221 2y25_A Myomesin; structural pr 99.7 6.3E-18 2.1E-22 140.2 9.9 175 123-306 7-257 (317)
222 2wng_A Tyrosine-protein phosph 99.7 1.7E-17 5.8E-22 138.4 12.6 172 132-307 10-258 (327)
223 3sob_H Antibody heavy chain, l 99.7 8.4E-17 2.9E-21 129.5 16.1 188 28-270 30-249 (256)
224 1l6x_A Immunoglobulin gamma-1 99.7 9.5E-18 3.2E-22 130.6 10.2 176 26-261 7-197 (207)
225 2j8h_A Titin, connectin; cardi 99.7 4.4E-17 1.5E-21 125.7 13.7 130 175-307 4-140 (197)
226 2w59_A IGY FCU3-4; immunoglobu 99.7 3.2E-17 1.1E-21 129.8 11.9 181 21-262 12-218 (231)
227 3iu4_H CHP3 FAB heavy chain; a 99.7 3.8E-17 1.3E-21 131.9 12.4 187 28-269 7-221 (263)
228 2wqr_A IG epsilon chain C regi 99.7 5.4E-17 1.9E-21 135.2 12.6 165 141-306 25-256 (323)
229 2cqv_A MLCK, myosin light chai 99.7 6.5E-17 2.2E-21 113.3 11.0 98 175-277 7-104 (114)
230 2iep_A Muscle-specific kinase 99.7 7.3E-17 2.5E-21 123.8 12.2 133 175-313 7-190 (192)
231 2kkq_A Myotilin; unknown funct 99.7 6.5E-17 2.2E-21 113.5 10.3 99 175-276 15-113 (116)
232 1ry7_B FGFR-3, fibroblast grow 99.7 4.3E-18 1.5E-22 142.4 4.7 169 132-307 15-258 (334)
233 1ypz_E T cell receptor delta, 99.7 1.2E-15 4.2E-20 118.5 18.0 85 24-109 4-93 (207)
234 1g1c_A Immunoglobulin-like dom 99.7 2.1E-16 7.1E-21 107.7 11.6 94 175-272 5-98 (99)
235 2dm2_A Palladin; beta-sandwich 99.7 6.5E-17 2.2E-21 112.5 9.0 99 175-276 8-106 (110)
236 3vh8_G Killer cell immunoglobu 99.7 4.3E-16 1.5E-20 129.3 15.4 178 117-306 18-252 (316)
237 2a38_A Titin; Z1Z2, structural 99.7 4.1E-16 1.4E-20 119.8 13.8 127 175-306 5-138 (194)
238 2kdg_A Myotilin; immonoglobuli 99.7 1.8E-16 6.3E-21 108.2 10.1 95 175-273 5-99 (100)
239 1itb_B Type 1 interleukin-1 re 99.7 5.7E-17 2E-21 134.4 8.9 166 133-307 13-245 (315)
240 3bp6_B Programmed cell death 1 99.7 3.3E-16 1.1E-20 121.2 12.6 128 178-306 5-138 (202)
241 3knb_B Obscurin-like protein 1 99.7 1.1E-16 3.8E-21 110.4 8.7 96 19-124 11-107 (107)
242 1u2h_A APEG-1, aortic preferen 99.7 1.4E-16 4.9E-21 108.5 9.3 94 175-272 5-98 (99)
243 3ejj_X Macrophage colony-stimu 99.7 1.2E-15 4.2E-20 124.7 16.4 164 132-306 11-222 (289)
244 1wit_A Twitchin 18TH IGSF modu 99.7 9.7E-17 3.3E-21 108.0 8.0 90 175-270 2-92 (93)
245 3lcy_A Titin; A-BAND, IG tande 99.7 4.7E-16 1.6E-20 119.7 13.0 127 175-306 7-138 (197)
246 3u83_A Poliovirus receptor-rel 99.7 4.5E-16 1.5E-20 129.9 13.7 121 181-306 138-268 (331)
247 3qp3_A Titin; I-SET IG-like, s 99.7 4E-16 1.4E-20 107.1 10.8 94 175-273 8-101 (103)
248 2edj_A Roundabout homolog 2; K 99.7 3.3E-16 1.1E-20 106.9 10.0 92 175-273 8-99 (100)
249 1mq8_A ICAM-1, intercellular a 99.7 1.9E-16 6.4E-21 128.6 10.2 224 27-280 5-290 (291)
250 2yd6_A PTPRD protein; hydrolas 99.7 1.2E-15 4.2E-20 119.0 14.5 129 175-307 6-144 (212)
251 2nzi_A Titin; IG-domain, FNIII 99.7 4.2E-16 1.4E-20 128.6 12.1 130 175-307 4-140 (305)
252 2y23_A Myomesin; structural pr 99.7 1.2E-15 4.1E-20 126.1 14.7 168 133-306 9-257 (312)
253 2o26_X MAST/stem cell growth f 99.7 1.8E-15 6.2E-20 123.9 14.6 171 122-307 11-225 (290)
254 3irg_B Obscurin-like protein 1 99.7 7.2E-16 2.5E-20 106.6 10.2 95 175-274 13-107 (107)
255 2dm3_A KIAA0992 protein, palla 99.7 2E-16 6.8E-21 110.0 7.4 98 175-276 9-106 (110)
256 3u1s_H FAB PGT145 heavy chain; 99.7 2.7E-15 9.3E-20 121.3 15.0 211 29-270 31-263 (267)
257 3o4o_C Interleukin-1 receptor 99.7 3.3E-17 1.1E-21 137.3 3.8 174 124-306 19-265 (339)
258 2e7c_A Myosin-binding protein 99.7 9.9E-16 3.4E-20 107.9 10.8 94 175-274 21-117 (118)
259 3puc_A Titin; I-SET IG-like do 99.7 1.1E-15 3.9E-20 104.0 10.8 93 175-272 6-98 (99)
260 2oz4_A Intercellular adhesion 99.7 4.4E-16 1.5E-20 125.9 10.1 117 136-272 14-182 (265)
261 1epf_A NCAM, protein (neural c 99.7 1.8E-15 6E-20 116.0 12.9 128 175-307 2-136 (191)
262 2aty_A Complement receptor chi 99.6 1.6E-15 5.4E-20 128.8 13.7 177 25-260 171-361 (376)
263 2dav_A SLOW MYBP-C, myosin-bin 99.6 5.1E-16 1.7E-20 109.0 8.8 97 176-272 8-111 (126)
264 1fnl_A Low affinity immunoglob 99.6 2E-15 6.9E-20 114.1 12.5 122 175-313 7-174 (175)
265 4dep_C Interleukin-1 receptor 99.6 7.5E-16 2.6E-20 129.6 11.0 114 184-306 129-265 (349)
266 2v44_A NCAM2, neural cell adhe 99.6 2.2E-15 7.4E-20 115.3 12.7 126 177-307 4-132 (189)
267 1ow0_A IG alpha-1 chain C regi 99.6 3.3E-17 1.1E-21 128.2 2.4 181 21-261 3-200 (214)
268 2c5d_C AXL oncogene, tyrosine- 99.6 1.3E-15 4.3E-20 117.2 11.3 130 175-307 2-143 (195)
269 1rhf_A Tyrosine-protein kinase 99.6 1.2E-15 4.1E-20 116.0 11.0 128 175-307 2-135 (182)
270 4fa8_A Secreted protein BARF1; 99.6 1E-15 3.5E-20 118.4 10.6 71 236-306 69-141 (203)
271 2va4_A NCAM2, N-CAM 2, neural 99.6 1.7E-15 5.7E-20 116.1 11.7 126 175-307 2-130 (192)
272 3p2t_A Leukocyte immunoglobuli 99.6 1E-15 3.5E-20 118.0 10.4 88 175-270 5-94 (196)
273 3f8u_B Tapasin; endoplasmic re 99.6 1.8E-14 6.2E-19 120.4 18.5 135 26-161 163-333 (401)
274 1wwb_X Protein (brain derived 99.6 1.5E-15 5E-20 104.1 9.9 87 188-275 14-101 (103)
275 2wv3_A Neuroplastin; igcam, me 99.6 2.4E-15 8.2E-20 115.2 12.2 119 175-307 3-128 (190)
276 1nct_A Titin; cell adhesion, g 99.6 8.3E-16 2.8E-20 106.0 8.2 95 172-271 11-105 (106)
277 2v9r_A Roundabout homolog 1; p 99.6 1E-15 3.6E-20 119.2 9.6 139 175-313 9-202 (212)
278 3sgj_C Human FCG3A receptor; r 99.6 3E-15 1E-19 116.0 12.2 121 175-312 7-173 (204)
279 3irg_A Titin; IG-like, titin, 99.6 2.4E-15 8.1E-20 102.5 10.1 92 175-271 5-98 (100)
280 2edn_A Myosin-binding protein 99.6 8.6E-16 2.9E-20 106.6 7.9 99 175-273 12-117 (118)
281 3cx2_A Myosin-binding protein 99.6 2.6E-15 8.8E-20 103.9 10.3 95 176-271 5-107 (108)
282 4acp_A IG gamma-1 chain C regi 99.6 9.8E-16 3.4E-20 121.5 9.3 180 21-260 23-217 (240)
283 3knb_A Titin; IG-like, titin, 99.6 1.7E-15 6E-20 103.0 9.2 94 20-121 4-98 (100)
284 2c1o_A IGK-C protein; FAB frag 99.6 8.9E-15 3E-19 117.4 14.9 167 94-306 11-191 (254)
285 2eo9_A Roundabout homolog 1; b 99.6 8E-16 2.7E-20 108.4 7.6 95 175-276 8-102 (118)
286 2yuz_A Myosin-binding protein 99.6 1.6E-15 5.3E-20 103.3 8.6 92 175-275 7-98 (100)
287 1fhg_A Telokin; immunoglobulin 99.6 3.4E-15 1.2E-19 110.3 11.0 97 175-275 41-137 (154)
288 1he7_A High affinity nerve gro 99.6 2.3E-15 8E-20 105.5 9.5 88 188-276 13-103 (126)
289 2yr3_A Myosin light chain kina 99.6 8.6E-16 2.9E-20 104.6 7.0 88 175-270 11-98 (99)
290 2bk8_A Connectin, M1, titin he 99.6 7.3E-15 2.5E-19 99.5 11.5 91 177-272 3-94 (97)
291 2gi7_A GPVI protein; IG-like d 99.6 4.5E-15 1.5E-19 113.2 11.5 79 175-270 8-88 (184)
292 2v5t_A NCAM2, N-CAM 2, neural 99.6 6E-15 2.1E-19 112.7 12.2 127 175-307 2-134 (189)
293 1gxe_A Myosin binding protein 99.6 1.1E-15 3.6E-20 110.3 7.4 86 182-271 25-138 (139)
294 2jll_A NCAM2, neural cell adhe 99.6 5E-15 1.7E-19 126.4 12.7 128 175-307 1-136 (389)
295 4fqp_A Poliovirus receptor; im 99.6 3.5E-14 1.2E-18 117.6 17.3 179 9-200 105-288 (313)
296 4fom_A Poliovirus receptor-rel 99.6 1.9E-15 6.4E-20 124.9 9.5 121 182-306 121-248 (308)
297 3kvq_A Vascular endothelial gr 99.6 1.2E-15 4.1E-20 105.6 6.9 94 175-275 10-103 (108)
298 2ckn_A Basic fibroblast growth 99.6 2.1E-15 7.1E-20 101.8 7.8 86 175-270 9-94 (95)
299 2yuz_A Myosin-binding protein 99.6 7.8E-15 2.7E-19 99.8 10.6 94 19-125 5-98 (100)
300 1f2q_A High affinity immunoglo 99.6 2.4E-15 8E-20 113.8 8.5 124 175-313 4-171 (176)
301 4dkd_C Macrophage colony-stimu 99.6 8.7E-15 3E-19 119.8 12.2 170 122-305 3-221 (292)
302 4f80_A Butyrophilin subfamily 99.6 3E-14 1E-18 112.2 14.8 126 181-306 10-154 (226)
303 1waa_A Titin; metal binding pr 99.6 1E-14 3.5E-19 97.7 10.3 88 175-272 5-92 (93)
304 2cqv_A MLCK, myosin light chai 99.6 2.9E-14 9.9E-19 99.6 13.1 99 19-127 5-104 (114)
305 1za6_B IGG heavy chain; immuno 99.6 1.2E-14 4.1E-19 122.0 13.2 119 186-306 131-279 (344)
306 3m45_A Cell adhesion molecule 99.6 1.5E-14 5.2E-19 99.9 11.5 105 19-124 4-108 (108)
307 2kkq_A Myotilin; unknown funct 99.6 1.9E-14 6.4E-19 100.9 12.0 101 17-125 11-112 (116)
308 1vca_A VCAM-D1,2, human vascul 99.6 1.7E-14 5.9E-19 111.6 12.9 114 185-306 11-129 (202)
309 1f97_A Junction adhesion molec 99.6 1.1E-14 3.9E-19 113.2 11.9 125 175-307 1-141 (212)
310 3ry4_A Low affinity immunoglob 99.6 1.1E-14 3.9E-19 109.3 11.4 120 176-312 5-170 (170)
311 3ojm_B Fibroblast growth facto 99.6 4E-15 1.4E-19 117.4 9.2 127 175-307 15-154 (231)
312 3caf_A Fibroblast growth facto 99.6 2.7E-15 9.1E-20 102.3 6.6 90 175-270 4-99 (100)
313 3nl4_L Antigen binding fragmen 99.6 3E-14 1E-18 111.1 13.1 127 176-306 2-150 (213)
314 1hxm_A Gamma-delta T-cell rece 99.6 1.4E-13 4.7E-18 108.5 16.8 86 24-109 4-97 (229)
315 3grw_A Fibroblast growth facto 99.6 1.5E-14 5E-19 115.1 11.0 120 182-307 22-150 (241)
316 2vr9_A Roundabout 1, ROBO; imm 99.6 3.2E-15 1.1E-19 117.0 7.0 131 174-307 8-145 (217)
317 3bfo_A Mucosa-associated lymph 99.6 8.6E-15 2.9E-19 97.9 8.0 84 175-272 3-87 (91)
318 2lu7_A Obscurin-like protein 1 99.6 1E-14 3.6E-19 95.5 8.1 80 183-272 4-83 (84)
319 3m45_A Cell adhesion molecule 99.6 3.9E-14 1.3E-18 97.9 11.2 94 177-274 8-108 (108)
320 2edf_A Obscurin; beta-sandwich 99.6 1.2E-14 4E-19 99.7 8.3 93 175-277 8-100 (103)
321 3k0w_A Mucosa-associated lymph 99.6 2.7E-14 9.4E-19 111.8 11.4 119 175-307 18-154 (218)
322 1oll_A NK receptor; immune sys 99.6 6.7E-14 2.3E-18 107.0 13.3 88 175-270 4-93 (188)
323 3sbw_C Programmed cell death 1 99.6 3.1E-14 1E-18 111.7 11.6 127 180-307 6-152 (222)
324 1x44_A Myosin-binding protein 99.6 2.5E-14 8.6E-19 98.0 9.6 91 176-276 8-100 (103)
325 3mj8_L Stimulatory hamster ant 99.6 6.9E-14 2.4E-18 109.0 13.3 126 176-306 2-151 (213)
326 1waa_A Titin; metal binding pr 99.6 6.2E-14 2.1E-18 93.9 11.1 90 19-122 3-92 (93)
327 1hng_A CD2; T lymphocyte adhes 99.5 1.5E-14 5.2E-19 109.3 9.0 113 185-307 6-131 (176)
328 2eo9_A Roundabout homolog 1; b 99.5 2.9E-14 1E-18 100.3 9.9 110 19-140 6-116 (118)
329 3s97_C Contactin-1; carbonic a 99.5 2.3E-14 7.8E-19 110.5 10.1 83 176-263 9-93 (201)
330 3rbg_A Cytotoxic and regulator 99.5 4.1E-14 1.4E-18 100.4 10.6 96 179-278 5-107 (124)
331 1g1c_A Immunoglobulin-like dom 99.5 3E-14 1E-18 96.8 9.5 94 20-122 4-98 (99)
332 3rbg_A Cytotoxic and regulator 99.5 3.6E-14 1.2E-18 100.7 10.2 116 24-140 4-119 (124)
333 3s35_X Vascular endothelial gr 99.5 8E-14 2.7E-18 98.6 11.9 93 181-274 14-112 (122)
334 2dm2_A Palladin; beta-sandwich 99.5 6.4E-14 2.2E-18 97.2 11.2 99 19-125 6-105 (110)
335 2cry_A KIN of IRRE-like protei 99.5 1.3E-15 4.3E-20 108.0 2.4 98 175-273 14-114 (122)
336 3mtr_A N-CAM-1, NCAM-1, neural 99.5 1.7E-13 5.9E-18 107.0 14.9 114 175-294 19-134 (215)
337 2lvc_A Obscurin-like protein 1 99.5 1.8E-14 6.2E-19 95.8 7.8 86 175-270 4-91 (91)
338 4fmk_A Poliovirus receptor-rel 99.5 2.6E-14 8.9E-19 112.0 9.9 131 183-313 9-219 (225)
339 2kdg_A Myotilin; immonoglobuli 99.5 2.8E-14 9.6E-19 97.2 8.7 96 19-123 3-99 (100)
340 3r4d_A CEA-related cell adhesi 99.5 2.8E-14 9.5E-19 110.8 9.8 128 181-313 5-200 (208)
341 2vol_A Murine IGG FC; FC, zinc 99.5 1.4E-14 4.9E-19 112.5 8.1 129 178-306 5-146 (207)
342 1jbj_A CD3 epsilon and gamma e 99.5 1.5E-14 5E-19 110.5 7.9 63 186-264 10-73 (186)
343 3qp3_A Titin; I-SET IG-like, s 99.5 5.7E-14 1.9E-18 96.2 10.0 96 18-123 5-101 (103)
344 1ugn_A LIR1, leukocyte immunog 99.5 1.5E-14 5E-19 111.6 7.7 123 175-306 5-134 (198)
345 2d3v_A Leukocyte immunoglobuli 99.5 1.6E-14 5.5E-19 111.2 7.7 123 175-306 5-133 (196)
346 3rbs_A Myomesin-1; immunoglobu 99.5 8E-14 2.7E-18 108.2 11.5 118 184-306 11-152 (207)
347 1gsm_A Madcam-1, mucosal addre 99.5 1.7E-13 5.9E-18 105.3 13.0 110 185-306 17-134 (210)
348 2ifg_A High affinity nerve gro 99.5 6.7E-15 2.3E-19 123.7 5.7 123 175-306 158-281 (347)
349 2edj_A Roundabout homolog 2; K 99.5 1.2E-13 4.1E-18 94.0 10.9 94 19-124 6-100 (100)
350 1fhg_A Telokin; immunoglobulin 99.5 7.4E-14 2.5E-18 103.1 10.4 104 17-129 37-141 (154)
351 2xot_A Amphoterin-induced prot 99.5 3E-14 1E-18 120.3 9.3 108 181-304 252-360 (361)
352 2e6p_A Obscurin-like protein 1 99.5 3.6E-14 1.2E-18 97.4 8.1 92 175-276 7-101 (104)
353 1gl4_B Basement membrane-speci 99.5 3.2E-14 1.1E-18 96.5 7.6 81 181-271 16-97 (98)
354 1iam_A ICAM-1, CD54, intercell 99.5 2.9E-12 9.9E-17 96.3 18.8 117 27-161 5-125 (185)
355 1wwc_A Protein (NT-3 growth fa 99.5 7.2E-14 2.5E-18 98.2 9.5 83 191-274 21-103 (118)
356 3irg_B Obscurin-like protein 1 99.5 6.4E-14 2.2E-18 96.6 8.6 96 19-124 11-107 (107)
357 2yuv_A Myosin-binding protein 99.5 1.8E-13 6.1E-18 93.2 10.6 90 175-274 7-97 (100)
358 2eny_A Obscurin; beta-sandwich 99.5 6E-14 2.1E-18 96.1 8.3 91 175-274 8-99 (104)
359 2ens_A Advanced glycosylation 99.5 1.8E-14 6.1E-19 97.4 5.4 82 175-270 10-93 (96)
360 2rgs_A I, IG gamma-2B heavy ch 99.5 2.8E-14 9.5E-19 111.8 7.2 131 175-306 9-154 (218)
361 2dm3_A KIAA0992 protein, palla 99.5 5.8E-14 2E-18 97.4 8.0 98 19-125 7-105 (110)
362 2fbo_J V1V2;, variable region- 99.5 2.8E-14 9.6E-19 114.0 7.2 128 178-308 5-173 (250)
363 2dlt_A Myosin binding protein 99.5 5.5E-14 1.9E-18 96.8 7.4 89 175-271 8-96 (106)
364 2v9t_A Roundabout homolog 1; s 99.5 1.8E-14 6.1E-19 101.2 5.0 99 175-273 9-110 (117)
365 1u2h_A APEG-1, aortic preferen 99.5 1.6E-13 5.6E-18 93.1 9.7 93 20-121 4-97 (99)
366 3cx2_A Myosin-binding protein 99.5 4.1E-13 1.4E-17 92.7 11.8 96 20-121 3-107 (108)
367 1nbq_A JAM, junctional adhesio 99.5 2.9E-14 1E-18 110.6 6.6 127 175-307 4-144 (209)
368 3puc_A Titin; I-SET IG-like do 99.5 2E-13 7E-18 92.6 9.8 93 19-121 4-97 (99)
369 3s96_B 3B5H10 FAB light chain; 99.5 3.6E-13 1.2E-17 105.3 12.5 126 176-306 2-158 (218)
370 2cr6_A KIAA1556 protein, obscu 99.5 5.5E-14 1.9E-18 98.4 6.9 98 21-130 13-110 (115)
371 2k1m_A Myosin-binding protein 99.5 2.6E-13 9E-18 91.4 10.1 86 176-271 9-94 (95)
372 2edk_A Myosin-binding protein 99.5 2.5E-14 8.7E-19 97.6 5.1 89 175-273 8-100 (101)
373 1ccz_A Protein (CD58); LFA-3, 99.5 6.1E-14 2.1E-18 105.4 7.6 112 184-306 4-125 (171)
374 2if7_A SLAM family member 6; N 99.5 1.5E-13 5.1E-18 105.5 9.9 122 181-307 4-146 (193)
375 3kvq_A Vascular endothelial gr 99.5 1.8E-13 6.1E-18 94.5 9.3 98 16-125 5-103 (108)
376 2cr3_A Basic fibroblast growth 99.5 4.2E-14 1.4E-18 96.1 5.9 84 181-274 9-92 (99)
377 1i1c_A IGG2A, IG gamma-2A chai 99.5 8.4E-14 2.9E-18 110.5 8.5 130 177-306 18-160 (239)
378 1x44_A Myosin-binding protein 99.5 5.2E-13 1.8E-17 91.3 11.2 91 21-125 7-99 (103)
379 2yuv_A Myosin-binding protein 99.5 7.2E-13 2.5E-17 90.1 11.8 91 20-124 6-97 (100)
380 1dr9_A B7-1 (CD80), T lymphocy 99.5 1.9E-13 6.6E-18 105.5 10.0 118 185-307 4-143 (201)
381 2e7b_A Obscurin; IG-like domai 99.5 1.1E-13 3.9E-18 94.7 7.8 92 175-276 8-99 (103)
382 2edf_A Obscurin; beta-sandwich 99.5 2.4E-13 8.2E-18 93.0 9.4 93 19-125 6-98 (103)
383 2edh_A Obscurin; structural ge 99.5 8E-13 2.7E-17 92.1 12.1 92 20-126 18-109 (113)
384 1uct_A Immunoglobulin alpha FC 99.5 2E-13 6.8E-18 106.9 10.0 124 175-306 9-140 (218)
385 2pet_A Lutheran blood group gl 99.5 1.5E-13 5.2E-18 108.4 9.3 121 181-306 6-155 (231)
386 2lu7_A Obscurin-like protein 1 99.5 2.5E-13 8.7E-18 88.8 8.7 82 28-123 3-84 (84)
387 3qr2_A Basigin; CD147, EMMPRIN 99.5 4.3E-13 1.5E-17 96.9 10.7 89 175-264 21-118 (137)
388 2eny_A Obscurin; beta-sandwich 99.5 2E-13 6.7E-18 93.6 8.4 94 19-125 6-100 (104)
389 2edh_A Obscurin; structural ge 99.5 5.4E-13 1.8E-17 92.9 10.8 91 175-276 19-109 (113)
390 3r06_A Anti-mouse CD3epsilon a 99.5 5.4E-13 1.9E-17 103.9 11.9 127 176-306 2-149 (213)
391 3jz7_A MCAR, CAR, coxsackievir 99.5 1.4E-13 4.8E-18 107.1 8.4 128 178-307 3-158 (214)
392 2e7c_A Myosin-binding protein 99.5 6.3E-13 2.2E-17 93.3 11.0 97 17-124 17-117 (118)
393 3d9a_L Light chain of hyhel10 99.5 5E-13 1.7E-17 104.1 11.5 125 178-306 4-149 (213)
394 1nct_A Titin; cell adhesion, g 99.5 1.3E-13 4.5E-18 94.8 7.2 95 17-121 10-105 (106)
395 1wit_A Twitchin 18TH IGSF modu 99.5 2.5E-13 8.4E-18 91.1 8.3 89 21-120 2-92 (93)
396 1p6f_A NKP46, natural cytotoxi 99.5 1.2E-12 4E-17 104.1 13.7 130 175-312 7-190 (242)
397 2dav_A SLOW MYBP-C, myosin-bin 99.5 4.3E-13 1.5E-17 94.1 9.6 96 21-122 7-111 (126)
398 2dku_A KIAA1556 protein; beta- 99.5 5.1E-13 1.7E-17 91.4 9.9 92 175-276 8-99 (103)
399 2e7b_A Obscurin; IG-like domai 99.5 8.9E-13 3.1E-17 90.2 11.1 93 19-125 6-98 (103)
400 1lk3_L 9D7 light chain; antige 99.5 7.1E-13 2.4E-17 103.1 11.8 125 177-306 3-148 (210)
401 2e6p_A Obscurin-like protein 1 99.5 4.9E-13 1.7E-17 91.6 9.6 92 20-125 6-100 (104)
402 1c1e_H Catalytic antibody 1E9 99.5 1.2E-12 4.1E-17 102.4 13.1 123 182-306 7-161 (219)
403 2dlt_A Myosin binding protein 99.5 5.5E-13 1.9E-17 91.7 9.9 91 19-121 6-96 (106)
404 3tv3_L PGT128 light chain, IG 99.5 5.3E-13 1.8E-17 103.8 11.0 123 177-306 3-148 (211)
405 2lvc_A Obscurin-like protein 1 99.4 5.1E-13 1.7E-17 88.8 9.2 78 20-108 3-82 (91)
406 3so5_A LIG-3, leucine-rich rep 99.4 3E-13 1E-17 93.9 8.4 95 175-270 10-111 (112)
407 2edk_A Myosin-binding protein 99.4 1.6E-13 5.3E-18 93.6 6.8 92 19-124 6-101 (101)
408 3mjg_X Beta-type platelet-deri 99.4 1.3E-13 4.6E-18 112.6 7.6 107 185-306 105-216 (289)
409 2cr6_A KIAA1556 protein, obscu 99.4 1.4E-13 4.9E-18 96.2 6.7 92 175-274 13-104 (115)
410 1moe_A Anti-CEA MAB T84.66; an 99.4 8.1E-13 2.8E-17 104.9 11.9 127 177-307 3-157 (240)
411 4hwu_A Fibroblast growth facto 99.4 2.9E-13 9.9E-18 91.1 7.9 83 181-274 7-89 (95)
412 3sob_L Antibody light chain; b 99.4 9.6E-13 3.3E-17 104.2 12.0 126 177-306 26-172 (237)
413 2bk8_A Connectin, M1, titin he 99.4 2.1E-12 7E-17 87.3 11.8 89 23-121 3-93 (97)
414 2dm7_A KIAA1556 protein; beta- 99.4 6.9E-13 2.4E-17 91.6 9.5 91 175-276 8-98 (108)
415 4dzb_B Vbeta2 (MAIT T cell rec 99.4 1.5E-12 5E-17 103.8 12.8 127 177-306 3-162 (246)
416 2e6q_A Obscurin-like protein 1 99.4 2.3E-12 8E-17 88.7 11.9 101 19-125 6-108 (112)
417 1z9m_A GAPA225; nectin-like, I 99.4 9.8E-13 3.4E-17 96.0 10.6 93 181-277 44-143 (145)
418 1z9m_A GAPA225; nectin-like, I 99.4 1.6E-12 5.6E-17 94.8 11.8 103 22-125 39-141 (145)
419 1q0x_L FAB 9B1, light chain; a 99.4 1.1E-12 3.8E-17 102.1 11.6 124 178-306 4-152 (212)
420 2r15_A Myomesin-1; sarcomeric 99.4 3.3E-13 1.1E-17 105.0 8.5 115 187-306 14-152 (212)
421 3shs_A HOC head outer capsid p 99.4 3.5E-11 1.2E-15 93.8 19.5 166 24-270 5-181 (304)
422 3irg_A Titin; IG-like, titin, 99.4 7.2E-13 2.4E-17 90.0 9.2 94 20-121 4-98 (100)
423 3bn3_B ICAM-5, intercellular a 99.4 6.6E-12 2.3E-16 95.1 15.3 119 25-161 6-128 (196)
424 1hnf_A CD2; T lymphocyte adhes 99.4 4.8E-13 1.6E-17 101.4 9.1 114 183-307 7-136 (182)
425 2edn_A Myosin-binding protein 99.4 4.1E-13 1.4E-17 93.1 7.9 99 19-123 10-117 (118)
426 2ckn_A Basic fibroblast growth 99.4 6.4E-13 2.2E-17 89.4 8.7 89 17-120 5-94 (95)
427 3pv7_A B7-H6, IG-like domain-c 99.4 1.6E-13 5.5E-18 109.6 6.7 125 180-307 8-156 (248)
428 2eys_A NKT15; natural killer T 99.4 4.6E-12 1.6E-16 98.2 14.5 86 23-108 5-96 (210)
429 2k1m_A Myosin-binding protein 99.4 2.1E-12 7.3E-17 86.8 11.1 88 20-121 7-94 (95)
430 1pd6_A Cardiac MYBP-C;, myosin 99.4 6.8E-13 2.3E-17 90.8 8.7 87 175-271 15-103 (104)
431 2ghw_B Anti-SARS SCFV antibody 99.4 1.4E-12 4.9E-17 104.0 11.8 123 183-307 10-171 (247)
432 1nkr_A P58-CL42 KIR; inhibitor 99.4 1.8E-12 6.3E-17 100.0 11.9 125 175-306 8-141 (201)
433 2cpc_A KIAA0657 protein; immun 99.4 2.7E-12 9.2E-17 89.3 11.5 97 19-129 8-107 (113)
434 3d9a_H Heavy chain of hyhel10 99.4 1.5E-12 5.3E-17 101.1 11.3 122 182-306 7-155 (210)
435 3auv_A SC-DSFV derived from th 99.4 2E-12 6.8E-17 105.0 12.4 128 176-307 13-172 (276)
436 2v5y_A Receptor-type tyrosine- 99.4 4.2E-12 1.4E-16 117.2 16.0 40 236-275 223-263 (731)
437 2x1w_L Vascular endothelial gr 99.4 5.2E-13 1.8E-17 104.1 8.3 117 182-306 14-142 (213)
438 1svz_A Immunoglobulin;, single 99.4 2.5E-12 8.6E-17 102.6 12.4 127 177-307 3-165 (247)
439 2w59_A IGY FCU3-4; immunoglobu 99.4 8.5E-13 2.9E-17 104.3 9.2 127 180-306 18-155 (231)
440 1nfd_E H57 FAB; complex (immun 99.4 1.1E-12 3.7E-17 102.1 9.7 125 178-307 3-151 (212)
441 2cpc_A KIAA0657 protein; immun 99.4 1.6E-12 5.5E-17 90.5 9.5 81 185-275 23-103 (113)
442 1l6x_A Immunoglobulin gamma-1 99.4 7.1E-13 2.4E-17 102.9 8.4 127 179-306 6-146 (207)
443 2znx_A SCFV; fluorotryptohpan, 99.4 2.8E-12 9.4E-17 102.1 12.0 127 177-307 3-160 (242)
444 2e6q_A Obscurin-like protein 1 99.4 3.2E-12 1.1E-16 88.0 10.7 91 175-275 8-108 (112)
445 1q9r_B S25-2 FAB (IGG1K) heavy 99.4 2.6E-12 8.8E-17 100.8 11.6 123 182-306 7-164 (222)
446 2dku_A KIAA1556 protein; beta- 99.4 5.3E-12 1.8E-16 86.2 11.7 93 19-125 6-98 (103)
447 2ny1_B T-cell surface glycopro 99.4 2.6E-13 8.8E-18 103.3 5.2 114 184-306 4-132 (184)
448 1op3_H FAB 2G12, heavy chain; 99.4 5.7E-12 2E-16 99.1 12.8 122 183-306 8-165 (225)
449 3b5h_A Cervical EMMPRIN, HAB18 99.4 3.8E-12 1.3E-16 96.7 11.3 108 185-307 8-120 (184)
450 1qok_A MFE-23 recombinant anti 99.4 5.5E-12 1.9E-16 102.7 13.0 123 182-307 33-197 (282)
451 2dru_A Chimera of CD48 antigen 99.4 2.2E-12 7.5E-17 97.7 9.8 116 183-307 7-136 (180)
452 2dm7_A KIAA1556 protein; beta- 99.4 3.7E-12 1.3E-16 87.8 10.0 92 19-125 6-97 (108)
453 3nfj_J T cell receptor beta ch 99.4 1.6E-11 5.4E-16 97.8 14.9 127 177-306 3-161 (245)
454 3bqu_C 3H6 FAB light chain; be 99.4 9E-13 3.1E-17 104.2 7.6 128 176-307 24-172 (233)
455 2xot_A Amphoterin-induced prot 99.4 1.3E-12 4.3E-17 110.4 8.9 108 27-158 252-360 (361)
456 2wbj_D OB TCR; transmembrane, 99.4 7E-12 2.4E-16 101.9 13.0 128 176-306 25-187 (279)
457 1pd6_A Cardiac MYBP-C;, myosin 99.4 6E-12 2.1E-16 86.0 10.5 90 18-121 12-103 (104)
458 1mq8_A ICAM-1, intercellular a 99.4 4E-12 1.4E-16 103.2 11.1 165 133-306 7-226 (291)
459 3bkj_L WO2 IGG2A FAB fragment 99.4 5E-12 1.7E-16 101.2 11.6 128 176-307 35-188 (252)
460 2yr3_A Myosin light chain kina 99.4 6.3E-13 2.2E-17 90.2 5.3 90 18-120 8-98 (99)
461 3esu_F Antibody 14B7* light ch 99.4 5.7E-12 2E-16 100.7 11.6 128 177-308 6-170 (250)
462 2zg1_A Sialic acid-binding IG- 99.4 1.7E-12 5.9E-17 101.1 8.3 125 180-306 5-162 (214)
463 2p1y_A Bispecific alpha/beta T 99.4 4.1E-12 1.4E-16 100.7 10.6 126 178-307 3-163 (238)
464 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 1.4E-11 4.6E-16 98.9 13.7 129 176-307 4-172 (256)
465 1gxe_A Myosin binding protein 99.4 2.3E-12 8E-17 92.7 8.3 92 28-120 25-137 (139)
466 1f3r_B FV antibody fragment; I 99.4 4.6E-12 1.6E-16 101.8 10.9 123 183-307 8-175 (257)
467 1pz5_B Heavy chain of FAB (SYA 99.4 4.5E-12 1.6E-16 99.2 10.6 123 182-306 7-162 (220)
468 2xzc_L FAB A.17 light chain; i 99.4 5.4E-12 1.8E-16 98.5 10.9 122 182-307 7-152 (216)
469 3gkz_A Anti-methamphetamine si 99.3 1.1E-11 3.8E-16 99.5 12.8 126 180-307 13-178 (257)
470 2gjj_A A21 single-chain antibo 99.3 9.6E-12 3.3E-16 100.3 12.2 129 176-308 6-177 (264)
471 1nqb_A Single-chain antibody f 99.3 8.4E-12 2.9E-16 100.1 11.7 122 182-307 7-162 (256)
472 4f9p_D 103.2 anti-BTN3A1 antib 99.3 2.7E-10 9.3E-15 87.4 19.3 132 30-161 9-173 (254)
473 3eow_R Poliovirus receptor; im 99.3 9.8E-13 3.4E-17 103.1 6.1 125 182-306 6-152 (221)
474 3mj6_A Junctional adhesion mol 99.3 1.2E-12 4E-17 105.7 6.6 126 177-307 7-157 (268)
475 3bae_H WO2 IGG2A FAB fragment 99.3 5.1E-12 1.7E-16 99.6 10.0 123 182-306 7-167 (228)
476 3qib_D 2B4 beta chain; IG doma 99.3 1.2E-11 4E-16 100.1 12.4 164 94-306 3-186 (270)
477 3zyj_A Leucine-rich repeat-con 99.3 2.9E-12 9.8E-17 111.2 9.2 96 175-276 341-437 (440)
478 1wwb_X Protein (brain derived 99.3 4.8E-12 1.6E-16 86.4 8.5 94 20-125 3-101 (103)
479 3juy_B 3B3 single chain varian 99.3 9.1E-12 3.1E-16 99.9 11.4 131 175-307 6-186 (256)
480 1dee_B IGM RF 2A2; FAB-IBP com 99.3 1.2E-11 4.2E-16 97.0 11.8 123 183-307 8-164 (223)
481 3omz_A Human vdelta1 gamma del 99.3 3.6E-12 1.2E-16 102.5 8.9 133 175-307 2-173 (259)
482 4frw_A Poliovirus receptor-rel 99.3 7.5E-12 2.6E-16 97.3 10.4 126 181-306 5-153 (218)
483 1mju_H Immunoglobulin MS6-12; 99.3 1.4E-11 4.7E-16 97.0 11.9 123 182-306 7-158 (227)
484 3caf_A Fibroblast growth facto 99.3 6.6E-13 2.3E-17 90.3 3.7 91 21-120 4-99 (100)
485 4ei6_B Vbeta16 XV19 type II na 99.3 1.1E-11 3.9E-16 98.6 11.3 126 177-306 4-161 (245)
486 2fbj_H IGA-kappa J539 FAB (hea 99.3 1.7E-11 5.9E-16 95.9 11.8 122 183-306 8-160 (220)
487 3s35_X Vascular endothelial gr 99.3 1.4E-11 4.7E-16 86.9 10.2 100 26-129 13-117 (122)
488 2eo1_A OBSCN protein, cDNA FLJ 99.3 3.9E-12 1.3E-16 86.8 7.0 80 184-273 20-99 (102)
489 1c5d_H Monoclonal antibody aga 99.3 1.3E-11 4.3E-16 96.4 10.7 123 182-306 7-159 (215)
490 1he7_A High affinity nerve gro 99.3 1.6E-11 5.5E-16 85.9 10.0 83 35-126 14-103 (126)
491 1sy6_A T-cell surface glycopro 99.3 5.4E-12 1.9E-16 97.6 8.4 57 187-258 15-71 (204)
492 1hxm_B Gamma-delta T-cell rece 99.3 1.1E-11 3.6E-16 98.7 10.3 130 176-307 2-170 (242)
493 3umt_A SCFV heavy chain and li 99.3 2.5E-11 8.6E-16 97.3 12.6 123 183-307 10-174 (256)
494 3uzq_A Anti-dengue MAB 4E11; d 99.3 1.6E-11 5.6E-16 98.2 11.5 127 179-307 5-173 (253)
495 2xqy_G A13-D6.3 monoclonal ant 99.3 2.5E-11 8.5E-16 97.6 12.4 123 182-306 13-166 (261)
496 1xau_A B- and T-lymphocyte att 99.3 1.2E-11 4.1E-16 81.5 8.3 88 185-272 24-116 (122)
497 3bfo_A Mucosa-associated lymph 99.3 1.4E-11 4.8E-16 82.0 8.8 81 21-120 3-85 (91)
498 3nl4_H Antigen binding fragmen 99.3 2.7E-11 9.4E-16 94.4 11.8 122 181-306 5-157 (215)
499 4i0k_A CD276 antigen; immunogl 99.3 1.8E-12 6E-17 101.6 5.0 120 184-306 4-146 (222)
500 2id5_A Lingo-1, leucine rich r 99.3 2.6E-12 8.9E-17 112.6 6.6 86 181-271 391-476 (477)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=3.7e-35 Score=263.45 Aligned_cols=271 Identities=21% Similarity=0.365 Sum_probs=202.9
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
+..+|.|+.++..+.+.+|+++.|.|.+.+.|.+.+.|+|++.. + ....++.+...+ ..++|.|.+++.+
T Consensus 2 v~~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~-l--------~~~~~~~~~~~~-~~~~L~I~~v~~~ 71 (570)
T 3b43_A 2 AMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTK-L--------RSAPAYKMQFKN-NVASLVINKVDHS 71 (570)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSB-C--------CCCSSEEEECCT-TEEEEEESSCCGG
T ss_pred CCCCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEE-c--------cCCCCEEEEEEC-CEEEEEEccCChh
Confidence 35689999999999999999999999999999999999996543 2 223444444322 2348999999999
Q ss_pred CCeEEEEEEecCC-CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee
Q psy15734 98 DRGWYMCQINTVP-MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL 173 (314)
Q Consensus 98 d~G~Y~C~~~~~~-~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~ 173 (314)
|+|.|+|.+.|.. .......|.|.. +|.+... ..+..+..|+.+.|.|.+.|.|.|.+.|++ ++..+......
T Consensus 72 D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~--~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k-~g~~l~~~~~~ 148 (570)
T 3b43_A 72 DVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARK--LKDVHETLGFPVAFECRINGSEPLQVSWYK-DGELLKDDANL 148 (570)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSC--CCCEEEETTSCEEEEEEEESSSSCEEEEEE-TTEECCCCSSE
T ss_pred hCEEEEEEEEeCCceEEEEEEEEECCCCCCCccccc--CCCeEecCCCeEEEEEEEccCCCCEEEEEE-CCEECcCCCCE
Confidence 9999999998753 333444555543 4444432 345667889999999999999999999999 66655432110
Q ss_pred ----------C-------------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCce
Q psy15734 174 ----------V-------------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL 206 (314)
Q Consensus 174 ----------~-------------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~ 206 (314)
. ||.+...+....+.+|+++.|.|.+.|.|+|.
T Consensus 149 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~ 228 (570)
T 3b43_A 149 QTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIK 228 (570)
T ss_dssp EEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCE
T ss_pred EEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCE
Confidence 0 67777777778889999999999999999999
Q ss_pred eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEE---Ec
Q psy15734 207 NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIR---KM 283 (314)
Q Consensus 207 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~---~~ 283 (314)
+.|++++ ..+....++.+....+ ...|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.-...+. .+
T Consensus 229 i~W~k~g-~~i~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v 303 (570)
T 3b43_A 229 ITWAKDN-REIRPGGNYKMTLVEN----TATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIV 303 (570)
T ss_dssp EEEEETT-EECCTTSSEEEEEETT----EEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCE
T ss_pred EEEEECC-EECcCCCcEEEEEECC----EEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEE
Confidence 9999974 4444455555443332 24899999999999999999999999988888888876542111111 12
Q ss_pred cccccEeEEEEEeeccCCCccce
Q psy15734 284 SRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 284 ~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
..++...+.|.+.+.|.|.+.|.
T Consensus 304 ~~g~~~~l~C~~~g~P~p~v~W~ 326 (570)
T 3b43_A 304 KQDEHTRYECKIGGSPEIKVLWY 326 (570)
T ss_dssp ESSCEEEEEEEEESSSSCEEEEE
T ss_pred cCCCcEEEEEEEeeCCCCEEEEe
Confidence 33445569999999999999995
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=9e-35 Score=260.97 Aligned_cols=270 Identities=20% Similarity=0.295 Sum_probs=206.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. . +..+.++.+..... ...|.|.+++.+|
T Consensus 195 ~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~-~--------i~~~~~~~~~~~~~-~~~L~i~~v~~~D 264 (570)
T 3b43_A 195 EVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNR-E--------IRPGGNYKMTLVEN-TATLTVLKVTKGD 264 (570)
T ss_dssp CCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTE-E--------CCTTSSEEEEEETT-EEEEEESSBCGGG
T ss_pred CCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCE-E--------CcCCCcEEEEEECC-EEEEEEcccCccc
Confidence 456777777888889999999999999998889999999553 2 22334444433222 2379999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee----
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL---- 173 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~---- 173 (314)
+|.|+|.+.|. +..+..+.|.|..+|.+.... .....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+......
T Consensus 265 ~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k-~~~~l~~~~~~~~~~ 342 (570)
T 3b43_A 265 AGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKL-EPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSKFRMSF 342 (570)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCBCCCEEEECC-CSBCCEESSCEEEEEEEEESSSSCEEEEEE-TTEECCCSSSEEEEE
T ss_pred CEEEEEEEECCCCcEEEEEEEEeecCCcccccC-CCccEEcCCCcEEEEEEEeeCCCCEEEEeE-CCEECCCCCcEEEEE
Confidence 99999999775 445667788888888876543 233457899999999999999999999999 66554332210
Q ss_pred ------C----------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC
Q psy15734 174 ------V----------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK 213 (314)
Q Consensus 174 ------~----------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~ 213 (314)
. +|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++
T Consensus 343 ~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~- 421 (570)
T 3b43_A 343 VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKD- 421 (570)
T ss_dssp ETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEET-
T ss_pred ECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEEC-
Confidence 0 78887777888889999999999999999999999997
Q ss_pred CeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEE----EEccccccE
Q psy15734 214 GDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQI----RKMSRLHMG 289 (314)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~----~~~~~~~~g 289 (314)
+..+..+.++.+... +. ..+|.|.++..+|+|.|+|.|.|..|.....+.|.|..+| .+.. ..+..++..
T Consensus 422 g~~l~~~~~~~~~~~-~~---~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P--~~~~~~~~~~~~~g~~~ 495 (570)
T 3b43_A 422 KRELRSGKKYKIMSE-NF---LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPP--RFVKKLSDISTVVGEEV 495 (570)
T ss_dssp TEECCSSSSEEEEEE-TT---EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCC--EEEECCCCBCCBTTCCE
T ss_pred CEECcCCCCEEEEEc-CC---EEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCC--cccccCCCceecCCCeE
Confidence 444545555554322 21 2489999999999999999999999999888888887653 2222 123344556
Q ss_pred eEEEEEeeccCCCccceE
Q psy15734 290 AYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 290 ~~~C~a~~~~~~~~~w~v 307 (314)
.+.|.+.+.++|.+.|..
T Consensus 496 ~l~c~~~g~p~~~v~W~k 513 (570)
T 3b43_A 496 QLQATIEGAEPISVAWFK 513 (570)
T ss_dssp EEEEEEESCSSCCCEEEE
T ss_pred EEEEEEecCCCCEEEEEe
Confidence 799999999999999953
No 3
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=3e-33 Score=229.43 Aligned_cols=236 Identities=22% Similarity=0.368 Sum_probs=183.8
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ..+.++.+..... ...|.|.+++.+|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~-~~~--------~~~~~~~~~~~~~-~~~L~i~~v~~~d 72 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN-REI--------RPGGNYKMTLVEN-TATLTVLKVTKGD 72 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETT-EEC--------CSSSSEEEEEETT-EEEEEESSCCGGG
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECC-EEC--------cCCCcEEEEEcCC-EEEEEEecCCccc
Confidence 46788888899999999999999999998888899999954 322 2233444433222 3489999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee----
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL---- 173 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~---- 173 (314)
+|.|+|.+.+. +..+..+.|.|..+|.+.... .....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+......
T Consensus 73 ~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~-~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~ 150 (284)
T 2rik_A 73 AGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKL-EPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSKFRMSF 150 (284)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCEEEECC-CSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCCSSSEEEEE
T ss_pred CEEEEEEEEECCceEEEEEEEEccCCCcccccC-CCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcCCCcEEEEE
Confidence 99999999765 444667788898888876543 345568899999999999999999999999 55554322210
Q ss_pred ------C----------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC
Q psy15734 174 ------V----------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK 213 (314)
Q Consensus 174 ------~----------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~ 213 (314)
. +|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++
T Consensus 151 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~- 229 (284)
T 2rik_A 151 VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKD- 229 (284)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEET-
T ss_pred cCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEEC-
Confidence 0 66666666777889999999999999999999999997
Q ss_pred CeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 214 GDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
+..+....++.+..... .+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 230 ~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 230 KRELRSGKKYKIMSENF----LTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp TEEECBTTTEEEEEETT----EEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEECcCCCCEEEEEcCC----EEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 45455555554432211 2489999999999999999999999999999888874
No 4
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=8.9e-32 Score=232.29 Aligned_cols=264 Identities=13% Similarity=0.076 Sum_probs=168.9
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
+.++..+..+.|.+|+++.|.|.+.+.|.+.+.|++++... ... .....+.+ ...+|.|.+++.+|+|.
T Consensus 49 ~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l-~~~--~~~~~~~~--------~~~sL~I~~v~~~D~G~ 117 (423)
T 3qs7_E 49 SGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSL-NCQ--PHFDLQNR--------GVVSMVILKMTETQAGE 117 (423)
T ss_dssp -------CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEE-CCC--CBC-------------CEEEEEESSCCSSSCSE
T ss_pred CcceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCcc-Ccc--ceeccccc--------eEEEEEEeecCcccCEE
Confidence 34455566899999999999999999999999999965331 110 00111111 12369999999999999
Q ss_pred EEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec-----------
Q psy15734 102 YMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY----------- 169 (314)
Q Consensus 102 Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~----------- 169 (314)
|+|.+.|. +.....+.|.|..+|.+... ....+..|+.+.|.|.+.|+|.|.+.|++. +..+..
T Consensus 118 Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~---~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~-~~~~~~~~~~~~~~~~~ 193 (423)
T 3qs7_E 118 YLLFIQSEATNYTILFTVSIRNTLLYTLR---RPYFRKMENQDALVCISESVPEPIVEWVLC-DSQGESCKEESPAVVKK 193 (423)
T ss_dssp EEEEEEC--CEEEEEEEEEEC-----CEE---EEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEE
T ss_pred EEEEEEcCCCcEEEEEEEEEecCcccccc---CCcEeccCCceEEEEEEeeecCCeEEEEEC-CCCCccccccccccccc
Confidence 99999875 33445566777665654321 122345688889999999999999999984 322210
Q ss_pred C---------CeeC-------------CCeEE------cCCCcceeecCccEEEEEEEee-cCCceeEEecCCCeeeecC
Q psy15734 170 N---------GELV-------------PPMLT------IPNQLEGAFVSQTVELHCHTEA-FPASLNYWTNEKGDMIITG 220 (314)
Q Consensus 170 ~---------~~~~-------------~p~~~------~~~~~~~v~~g~~~~l~C~~~g-~p~p~~~W~~~~~~~~~~~ 220 (314)
. +.+. .-.+. .++....+.+|+++.|.|.+.| .|.|.+.|++++.. +...
T Consensus 194 ~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~-l~~~ 272 (423)
T 3qs7_E 194 EEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA-LEEG 272 (423)
T ss_dssp CCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSB-CCGG
T ss_pred cceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEE-cccc
Confidence 0 0000 00111 1344567889999999999999 67799999997553 3222
Q ss_pred CceeeeEe-eCC-eeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEE------EccccccEeEE
Q psy15734 221 DDYEDSRL-ING-YSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIR------KMSRLHMGAYL 292 (314)
Q Consensus 221 ~~~~~~~~-~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~------~~~~~~~g~~~ 292 (314)
..+..... .+. ....++|.|.++..+|+|.|+|.|.|. ....+.|.|..++ .+.+. .+..++...+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p--~i~~~~~~~~~~v~~G~~v~l~ 347 (423)
T 3qs7_E 273 NYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKG--FINATNSSEDYEIDQYEEFCFS 347 (423)
T ss_dssp GEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSC--EEEEC---CEECCCTTCCCCEE
T ss_pred ceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCC--cceEcCCCccEEecCCCeEEEE
Confidence 22211111 111 223458999999999999999999998 6777788887653 23221 23334455699
Q ss_pred EEEeeccCCCccce
Q psy15734 293 CIASNGVVPSVSHR 306 (314)
Q Consensus 293 C~a~~~~~~~~~w~ 306 (314)
|.+.+.|.|.++|.
T Consensus 348 C~~~g~P~p~i~W~ 361 (423)
T 3qs7_E 348 VRFKAYPQIRCTWT 361 (423)
T ss_dssp EEEEEESCCEEEEE
T ss_pred EEEEEcCCCeEEEE
Confidence 99999999999996
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=1.1e-31 Score=220.80 Aligned_cols=237 Identities=20% Similarity=0.350 Sum_probs=174.9
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCC-ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLR-EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+|.|..+|....+.+|+++.|.|.+.+.+ .+.+.|++.++..+. ....++.+...+...+.|.|.+++.+|+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 74 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWNDDDSSTLTIYNANIDDA 74 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCC-------SSCSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECc-------cCCceEEEEEcCCCeEEEEEecCCCCCC
Confidence 57788889999999999999999998875 689999995544321 2234555544333455899999999999
Q ss_pred eEEEEEEecCCC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecC-------
Q psy15734 100 GWYMCQINTVPM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYN------- 170 (314)
Q Consensus 100 G~Y~C~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~------- 170 (314)
|.|+|.+.+... .+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+...
T Consensus 75 G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~ 151 (291)
T 1qz1_A 75 GIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVILKKDVRFIV 151 (291)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEECCSEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEE-TTSCSSTTCCTTEEE
T ss_pred EEEEEEEEcCCCCeeEEEEEEEeeccccccCCC--CcccccCCCeEEEEEEeccCCCCEEEEEE-CCEEcccCCCceEEE
Confidence 999999977542 3455677777777766543 55678899999999999999999999999 55443211
Q ss_pred ---CeeC-----------------------------------CCeEEcCC--CcceeecCccEEEEEEEeecCCceeEEe
Q psy15734 171 ---GELV-----------------------------------PPMLTIPN--QLEGAFVSQTVELHCHTEAFPASLNYWT 210 (314)
Q Consensus 171 ---~~~~-----------------------------------~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~~~W~ 210 (314)
+.+. +|.+.... ....+..|+++.|.|.+.|.|.|.+.|+
T Consensus 152 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~ 231 (291)
T 1qz1_A 152 LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWT 231 (291)
T ss_dssp CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEE
T ss_pred ccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEE
Confidence 1000 44444332 2446778999999999999999999999
Q ss_pred cCCCeeeecCCc--eeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 211 NEKGDMIITGDD--YEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 211 ~~~~~~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
+++. .+..... .......++ +.|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 232 ~~g~-~~~~~~~~~~~~~~~~~~----~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 232 KDGE-PIENEEEDDEKHIFSDDS----SELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp ETTE-ECCCC--CCSSEEECTTS----CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECCE-ECcCCCCCCcceEEcCCC----cEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 9744 3332221 111111221 3899999999999999999999999999999998864
No 6
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1.5e-31 Score=237.88 Aligned_cols=274 Identities=16% Similarity=0.207 Sum_probs=196.0
Q ss_pred eccCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 15 KCEKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 15 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
.+.+..+|.+...+....+.+|+++.|.|.+.+.+.+.+.|++.++..+ ..+.++.+.... .|.|.++
T Consensus 108 ~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l--------~~~~~~~~~~~~----~L~i~~~ 175 (524)
T 2ec8_A 108 YVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPL--------PKDLRFIPDPKA----GIMIKSV 175 (524)
T ss_dssp EEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCC--------CSSCEEEEETTT----EEEEESC
T ss_pred EEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCc--------CCCCceeECCCc----cEEEecc
Confidence 3344456666677778889999999999999886668999998555432 223344333222 6999999
Q ss_pred cCCCCe-EEEEEEecCCCc--ceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEecccCCCc-eEEEcCCCce
Q psy15734 95 QETDRG-WYMCQINTVPMT--SQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPY-VAWRREDGKA 166 (314)
Q Consensus 95 ~~~d~G-~Y~C~~~~~~~~--~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-~~W~~~~~~~ 166 (314)
+.+|+| .|+|.+.+.... +..+.|.|. .+|.+... +....+.+|+.+.|.|.+.+.|.|. +.|++. +..
T Consensus 176 ~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~--~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~-~~~ 252 (524)
T 2ec8_A 176 KRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVS--KASYLLREGEEFTVTCTIKDVSSSVYSTWKRE-NSQ 252 (524)
T ss_dssp CGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECS--CSEEEEETTSCEEEEEEEEESSTTCEEEEEET-TCS
T ss_pred chhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEec--CCcceEEcCCcEEEEEEEecCCCcEEEEEEeC-CCC
Confidence 999999 999999765322 346677776 56666554 3556789999999999999998887 999994 444
Q ss_pred e--ecC--------------CeeC---------------------------------CCeEEcCC---CcceeecCccEE
Q psy15734 167 I--NYN--------------GELV---------------------------------PPMLTIPN---QLEGAFVSQTVE 194 (314)
Q Consensus 167 ~--~~~--------------~~~~---------------------------------~p~~~~~~---~~~~v~~g~~~~ 194 (314)
+ ... +.+. +|.+...+ ....+.+|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~ 332 (524)
T 2ec8_A 253 TKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVD 332 (524)
T ss_dssp CCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEE
T ss_pred CccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEE
Confidence 1 100 0000 56555433 367889999999
Q ss_pred EEEEEeecCCce-eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 195 LHCHTEAFPASL-NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 195 l~C~~~g~p~p~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|.+.|.|.|. +.|++++..+.....++......+.+...+.|.|.++..+|+|.|+|.|.|..|....++.|.|..+
T Consensus 333 l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 412 (524)
T 2ec8_A 333 LIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK 412 (524)
T ss_dssp EEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE
T ss_pred EEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecC
Confidence 999999999999 9999985443332223332222222445679999999999999999999999999999999988766
Q ss_pred CCCeeEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 274 DGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 274 ~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
| .+..... ...|.+.|.+.+.|.|.+.|..
T Consensus 413 P--~i~~~~~--~~~g~l~C~~~g~P~p~i~W~~ 442 (524)
T 2ec8_A 413 P--EILTYDR--LVNGMLQCVAAGFPEPTIDWYF 442 (524)
T ss_dssp E--EEEEEEC--CSSSCEEEEEEEESCCEEECCC
T ss_pred C--eEeeccc--CcCcEEEEEEEeecCCEEEEEE
Confidence 4 2322221 2234999999999999999964
No 7
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-31 Score=218.15 Aligned_cols=232 Identities=20% Similarity=0.368 Sum_probs=167.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEe-CCceeEEEEEeeecC-
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITF-NDHRSWFLHLRDVQE- 96 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~- 96 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. + ...++.... .+.....|.|.+++.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~-i---------~~~~~~~~~~~~~~~~~L~i~~~~~~ 73 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKK-V---------NSQRFETIEFDESAGAVLRIQPLRTP 73 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-----------------CTTEEEEEETTTTEEEEEECSCCTT
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEE-C---------CCCceEEEEecCCCceEEEEeccccc
Confidence 4679999999999999999999999999888899999995432 2 123433332 222234799999998
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEEeC-------CceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceee
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVVVP-------PRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~ 168 (314)
+|+|.|+|.+.+. +.....+.|.|..+ |.+... +....+..|+.+.|.|.+.+.|.|.+.|++ ++..+.
T Consensus 74 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~--~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k-~~~~~~ 150 (304)
T 2yd9_A 74 RDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMG--PQLKVVERTRTATMLCAASGNPDPEITWFK-DFLPVD 150 (304)
T ss_dssp TTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEEC--CCCEEEETTSCEEECCEEECSSCCEEEEEE-TTEECC
T ss_pred CCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecC--CccEEEeCCCeEEEEEECccCCCCeEEEEE-CCEECc
Confidence 9999999999765 44456677888765 334333 356678899999999999999999999999 555443
Q ss_pred cCC-----------eeC-------------------------------------CCeEEcCCCcceeecCccEEEEEEEe
Q psy15734 169 YNG-----------ELV-------------------------------------PPMLTIPNQLEGAFVSQTVELHCHTE 200 (314)
Q Consensus 169 ~~~-----------~~~-------------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~ 200 (314)
... .+. +|.+...+....+.+|+++.|.|.+.
T Consensus 151 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~ 230 (304)
T 2yd9_A 151 PSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAV 230 (304)
T ss_dssp GGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEE
T ss_pred CCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEe
Confidence 210 000 45555566667789999999999999
Q ss_pred ecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 201 AFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 201 g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
|.|.|.+.|++++ ..+.....+. .+ ...|.|.++ +|+|.|+|.|.|..|.....+.|.|...+
T Consensus 231 g~p~p~v~W~~~~-~~l~~~~~~~-----~~---~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 231 GSPMPYVKWMQGA-EDLTPEDDMP-----VG---RNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp EESCCEEEEEETT-EECSCSSSCC-----BS---EEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred eeCCCEEEEEECC-EECCCccccc-----CC---cEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 9999999999974 3333322211 11 236777665 69999999999999999999999887654
No 8
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1e-30 Score=232.53 Aligned_cols=268 Identities=15% Similarity=0.145 Sum_probs=194.9
Q ss_pred eeeeccCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEE
Q psy15734 12 FKTKCEKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 12 ~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 91 (314)
....+.+..+|.+...+..+.+.+|++++|.|.+.+ .+.|++++.. + . ... ..+.|.|
T Consensus 27 ~~i~l~v~~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~-~------------~--~~~---~~~~L~I 84 (524)
T 2ec8_A 27 PSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILD-E------------T--NEN---KQNEWIT 84 (524)
T ss_dssp ------CCCCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSS-C------------C--EEE---CSSEEEE
T ss_pred CeEEcCCCCCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcc-c------------c--ccC---ccceEEE
Confidence 334445667888887788899999999999999986 9999996642 1 0 001 1237999
Q ss_pred eeecCCCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecC-
Q psy15734 92 RDVQETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYN- 170 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~- 170 (314)
.+++.+|+|.|+|.+.+ + .+..+.|.|..+|.+.. .+....+.+|+.+.|.|.+.+.+.+.+.|++.++..+...
T Consensus 85 ~~~~~~D~G~Y~C~a~n-g-~~~~~~l~V~~p~~~~~--~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~ 160 (524)
T 2ec8_A 85 EKAEATNTGKYTCTNKH-G-LSNSIYVFVRDPAKLFL--VDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDL 160 (524)
T ss_dssp SSCCSTTCEEEEEEETT-S-CEEEEEEECCCSSCSBC--CCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSC
T ss_pred cccchhhCEEEEEeecC-C-cceEEEEEECCCCcccc--cccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCC
Confidence 99999999999999977 3 46667788777766553 2456678899999999999987779999998666554321
Q ss_pred --------------------C-eeC-------------------------CCeEEcCCCcceeecCccEEEEEEEeecCC
Q psy15734 171 --------------------G-ELV-------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPA 204 (314)
Q Consensus 171 --------------------~-~~~-------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~ 204 (314)
+ .+. +|.+...+....+.+|+++.|.|.+.|.|.
T Consensus 161 ~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~ 240 (524)
T 2ec8_A 161 RFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSS 240 (524)
T ss_dssp EEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESST
T ss_pred ceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCC
Confidence 1 111 567777777778999999999999999999
Q ss_pred ce-eEEecCCCee-eecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEE--
Q psy15734 205 SL-NYWTNEKGDM-IITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQI-- 280 (314)
Q Consensus 205 p~-~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~-- 280 (314)
|. +.|++++... +.......+. ........+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|...+..
T Consensus 241 p~~i~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 319 (524)
T 2ec8_A 241 SVYSTWKRENSQTKLQEKYNSWHH-GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMI 319 (524)
T ss_dssp TCEEEEEETTCSCCCCEEEEEEEC-SSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESS
T ss_pred cEEEEEEeCCCCCccccccccccc-cCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCC
Confidence 87 9999986552 1111111111 01123345699999999999999999999999999888888888654322211
Q ss_pred ---EEccccccEeEEEEEeeccCCC-ccce
Q psy15734 281 ---RKMSRLHMGAYLCIASNGVVPS-VSHR 306 (314)
Q Consensus 281 ---~~~~~~~~g~~~C~a~~~~~~~-~~w~ 306 (314)
..+..++...+.|.+.+.|.|. +.|.
T Consensus 320 ~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~ 349 (524)
T 2ec8_A 320 NTTVFVNDGENVDLIVEYEAFPKPEHQQWI 349 (524)
T ss_dssp CSEEEECTTCCEEEEEEEEEESCCCEEEEE
T ss_pred CceEEEcCCCcEEEEEEEeecCCCcEEEEE
Confidence 2344556667999999999998 9995
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.98 E-value=8.9e-32 Score=230.15 Aligned_cols=266 Identities=20% Similarity=0.216 Sum_probs=182.9
Q ss_pred CCCceecCCcceEE---EcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee-c
Q psy15734 20 DMPRFAEPVANVTA---TVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV-Q 95 (314)
Q Consensus 20 ~~p~~~~~~~~~~v---~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~ 95 (314)
..|.|+..|....+ .+|+.+.|.|.+.|.|.+.+.|++++ ..+.. ..+.++.+.. +.|.|.+. +
T Consensus 4 ~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g-~~l~~------~~~~~~~~~~-----g~l~i~~~~~ 71 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNG-TDVDI------GMDFRYSVVD-----GSLLINNPNK 71 (384)
T ss_dssp EEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETT-EECCC----------CEEEET-----TEEEEESCCH
T ss_pred CCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECC-EECcC------CCCccEEEEC-----CEEEEcCCCC
Confidence 35788888877776 57899999999999999999999954 43211 1123333321 26777776 8
Q ss_pred CCCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCCe
Q psy15734 96 ETDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNGE 172 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~~ 172 (314)
.+|+|.|+|.+.|.... +....|.+...+.+.... .....+.+|+.+.|.|... +.|.+.+.|++ ++.++.....
T Consensus 72 ~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~-~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~ 149 (384)
T 3kld_A 72 TQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRT-RSTVSVRRGQGMVLLCGPPPHSGELSYAWIF-NEYPSYQDNR 149 (384)
T ss_dssp HHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCC-CCCEEEEETCCEEECCCCCSEESCEEEEEEE-TTEECCCSSS
T ss_pred cccCEEEEEEEEcCcccEEecceEEEEecccccccCC-CCceeEEcCCCeEEecCCCCCCCCeEEEEEE-CCCCCEeecc
Confidence 89999999999876332 334556665544433222 3456788999999999765 45778999998 4443321110
Q ss_pred ---------eC---------------------------C----------------CeEE-cCCCcceeecCccEEEEEEE
Q psy15734 173 ---------LV---------------------------P----------------PMLT-IPNQLEGAFVSQTVELHCHT 199 (314)
Q Consensus 173 ---------~~---------------------------~----------------p~~~-~~~~~~~v~~g~~~~l~C~~ 199 (314)
+. + |.+. ..+....+.+|+++.|.|.+
T Consensus 150 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~ 229 (384)
T 3kld_A 150 RFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFA 229 (384)
T ss_dssp EEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEE
T ss_pred EEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEE
Confidence 00 0 1111 12345567889999999999
Q ss_pred eecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeE
Q psy15734 200 EAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQ 279 (314)
Q Consensus 200 ~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~ 279 (314)
.|.|.|.+.|+++++..+...... ...++ .|.|.++..+|+|.|+|.|.|..|.......|.|...|.-...
T Consensus 230 ~g~P~p~i~W~k~~~~~~~~~~~~---~~~~~-----~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~ 301 (384)
T 3kld_A 230 LGNPVPTILWRRADGKPIARKARR---HKSNG-----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQI 301 (384)
T ss_dssp EEESCCEEEEEETTCCCCCTTCEE---CTTSC-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEC
T ss_pred eecCCCcEEEEeCCCcccccccee---cCCCc-----EEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccC
Confidence 999999999999766544322111 11233 8999999999999999999999999988888888776421111
Q ss_pred --EEEccccccEeEEEEEeeccCCCccceE
Q psy15734 280 --IRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 280 --~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
...+..++...+.|.|.+.|.|.+.|..
T Consensus 302 ~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k 331 (384)
T 3kld_A 302 INDIHVAMEESVFWECKANGRPKPTYRWLK 331 (384)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCEEEEEE
T ss_pred CCceEecCCCCEEEEeECCccCCCeEEEEE
Confidence 1234445556799999999999999953
No 10
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.98 E-value=7.9e-31 Score=215.75 Aligned_cols=236 Identities=19% Similarity=0.345 Sum_probs=172.3
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
..|.|..++..+.+.+|+++.|.|.+.+.+. .+.|++.++..+ ..+.++.+..++. ...|.|.+++.+|+
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~--------~~~~~~~~~~~~~-~~~L~i~~~~~~D~ 72 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKI--------ISTQRVVVQKEGV-RSRLTIYNANIEDA 72 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBC--------CCBTTEEEEEETT-EEEEEECSCCGGGC
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCc--------cCCCcEEEecCCC-EEEEEEccCCcccC
Confidence 4688889999999999999999999998765 899999554432 2344555554432 23799999999999
Q ss_pred eEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec--------
Q psy15734 100 GWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY-------- 169 (314)
Q Consensus 100 G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~-------- 169 (314)
|.|+|.+.+.... ...+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+..
T Consensus 73 G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~ 149 (291)
T 2wim_A 73 GIYRCQATDAKGQTQEATVVLEIYQKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAM 149 (291)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEEECCCBCCSCC--CSEEEETTSCEEECCCCBCSSCCEEEEEC-C----CBCCCSSEEE
T ss_pred EEEEEEEecccCceEEEEEEEEecCCcceEeCC--CChhhcCCCCEEEEEEEccCCCCEEEEEE-CCccccccCCceEEE
Confidence 9999999765333 345667777777765443 45678899999999999999999999998 4443321
Q ss_pred --CCeeC-----------------------------------CCeEEcCCC--cceeecCccEEEEEEEeecCCceeEEe
Q psy15734 170 --NGELV-----------------------------------PPMLTIPNQ--LEGAFVSQTVELHCHTEAFPASLNYWT 210 (314)
Q Consensus 170 --~~~~~-----------------------------------~p~~~~~~~--~~~v~~g~~~~l~C~~~g~p~p~~~W~ 210 (314)
++.+. +|.+..... ...+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 150 ~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 229 (291)
T 2wim_A 150 LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWF 229 (291)
T ss_dssp CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEE
T ss_pred ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEE
Confidence 11110 344333332 346778999999999999999999999
Q ss_pred cCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCC
Q psy15734 211 NEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 275 (314)
++ +..+....++.+. ..+ +.|.|.++..+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 230 ~~-g~~~~~~~~~~~~-~~~-----~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 287 (291)
T 2wim_A 230 RN-GKLIEENEKYILK-GSN-----TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287 (291)
T ss_dssp ET-TEECCCTTTEEEC-STT-----CEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred EC-CEECcCCccEEEc-CCc-----cEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEecc
Confidence 97 4444444443322 122 2899999999999999999999999999999999887653
No 11
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.98 E-value=7.3e-31 Score=225.79 Aligned_cols=268 Identities=19% Similarity=0.291 Sum_probs=191.5
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee-
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV- 94 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~- 94 (314)
.......|..+|..+.+.+|+++.|.|.+.+ .+.+.+.|++++ ..+. ...+.+.....++ .|.|.++
T Consensus 17 ~~~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g-~~~~------~~~~~~~~~~~~~----~l~i~~~~ 85 (403)
T 3laf_A 17 GGRRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDG-LILA------LGMDDRKQQLPNG----SLLIQNIL 85 (403)
T ss_dssp --CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETT-EECC------TTSCTTEEECTTS----CEEECSCC
T ss_pred CCceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECC-EECc------cCCcccEEEecCC----cEEEeeee
Confidence 3455677888999999999999999999976 577899999954 3321 1122344333222 5777777
Q ss_pred ----cCCCCeEEEEEEecC-CC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCcee
Q psy15734 95 ----QETDRGWYMCQINTV-PM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAI 167 (314)
Q Consensus 95 ----~~~d~G~Y~C~~~~~-~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~ 167 (314)
+.+|+|.|+|.+.+. .. .+..+.+.|..+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+
T Consensus 86 ~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~--~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~ 162 (403)
T 3laf_A 86 HSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQ--TESITAFMGDTVLLKCEVIGDPMPTIHWQK-NQQDL 162 (403)
T ss_dssp CBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSC--CCCEEEETTSCEEECCCEECSSCCEEEEEE-SSSBC
T ss_pred ccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccC--CCcEEEEcCCeEEEEEEEcccCCCeEEEEE-CCEec
Confidence 778999999999743 22 244566777777766543 356778999999999999999999999999 55443
Q ss_pred ec-----------CCeeC----------------------------------C------CeEEcCCCcceeecCccEEEE
Q psy15734 168 NY-----------NGELV----------------------------------P------PMLTIPNQLEGAFVSQTVELH 196 (314)
Q Consensus 168 ~~-----------~~~~~----------------------------------~------p~~~~~~~~~~v~~g~~~~l~ 196 (314)
.. .+.+. + +.+...+....+.+|+++.|.
T Consensus 163 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~ 242 (403)
T 3laf_A 163 NPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLE 242 (403)
T ss_dssp CCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEEC
T ss_pred cccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEE
Confidence 21 01000 1 123334556678899999999
Q ss_pred EEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 197 CHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 197 C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.+.+.|.|.+.|++++.........+ ....+. .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 243 C~~~~~p~~~~~W~~~~~~~~~~~~~~--~~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-- 313 (403)
T 3laf_A 243 CCVSGYPPPSFTWLRGEEVIQLRSKKY--SLLGGS-----NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPP-- 313 (403)
T ss_dssp CEEEEESCCEEEEEETTEECCCSSSSE--EEETTT-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE--
T ss_pred EEcCCCCCCeEEEEECCeeccCCCceE--EECCcc-----EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCC--
Confidence 999999999999999754333222222 223334 89999999999999999999999999999999887754
Q ss_pred eeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 277 IFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 277 ~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 314 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~ 348 (403)
T 3laf_A 314 WFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMK 348 (403)
T ss_dssp EEEECCCCEECCTTCCEEECCEEEEESCCEEEEEE
T ss_pred cEeecCcceEEecCCeEEEEEEEeeccCCEEEEEE
Confidence 1211 123445556799999999999999954
No 12
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=6.8e-30 Score=227.16 Aligned_cols=275 Identities=14% Similarity=0.127 Sum_probs=181.3
Q ss_pred ecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeEE---Eeee-eeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 25 AEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQTIL---SIHH-KVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 25 ~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+..+..+.+.+|+++.|.|.+.+.+.+.+.|+|++ +..+. .... .......|+.... ....+.|.|.+++.+|+
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~~D~ 82 (523)
T 2rcj_C 4 LTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSK-SGTSASLAISGLEAEDE 82 (523)
T ss_pred cccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEec-CCCEEEEEECCCChhhC
Confidence 34566789999999999999988888999999964 22111 1000 0011234555332 22345899999999999
Q ss_pred eEEEEEEecCCC----cceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEecccCCC--ceEEEcCCCceeec
Q psy15734 100 GWYMCQINTVPM----TSQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP--YVAWRREDGKAINY 169 (314)
Q Consensus 100 G~Y~C~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~~~W~~~~~~~~~~ 169 (314)
|.|+|.+.+... ......|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|++ .+.|++ ++..+..
T Consensus 83 G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~--~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 159 (523)
T 2rcj_C 83 SDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFP--PSSEELQANKATLVCLISDFYPGAVTVAWKA-DGSPVKA 159 (523)
T ss_pred EEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecC--CcccccCCCceEEEEEeccccCCceEEEEec-CCCCCCC
Confidence 999999976432 2244567773 456555433 33455679999999999988654 999999 6654421
Q ss_pred C-----------Ce------eC-------------------------------------CCeEEcCCCcceeecCccEEE
Q psy15734 170 N-----------GE------LV-------------------------------------PPMLTIPNQLEGAFVSQTVEL 195 (314)
Q Consensus 170 ~-----------~~------~~-------------------------------------~p~~~~~~~~~~v~~g~~~~l 195 (314)
. +. +. +|.+........+.+|+.+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l 239 (523)
T 2rcj_C 160 GVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAAL 239 (523)
T ss_pred ceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEE
Confidence 1 00 00 333332222335678999999
Q ss_pred EEEEeec-CCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 196 HCHTEAF-PAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 196 ~C~~~g~-p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
.|.+.|. |.| .+.|++++....... ........+.|...+.|.|.++..+| |.|+|.|.|..|.......|.|...
T Consensus 240 ~C~~~g~~P~p~~v~W~k~g~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~ 317 (523)
T 2rcj_C 240 GCLVKDYFPQPVTVSWNSGALTSGVHT-FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL 317 (523)
T ss_pred EEEEeceeCCCeEEEEecCCcccceEe-CCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC
Confidence 9999986 878 899999754422111 11111122335567799999999999 9999999999998877777766544
Q ss_pred CCCeeEEE-E-----ccccccEeEEEEEeeccC----CCccceE
Q psy15734 274 DGDIFQIR-K-----MSRLHMGAYLCIASNGVV----PSVSHRI 307 (314)
Q Consensus 274 ~~~~~~~~-~-----~~~~~~g~~~C~a~~~~~----~~~~w~v 307 (314)
| .+.+. . +..++...+.|.+.+.++ +.+.|..
T Consensus 318 P--~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k 359 (523)
T 2rcj_C 318 P--SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYV 359 (523)
T ss_pred c--eEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEE
Confidence 2 22221 1 334555679999998654 3888953
No 13
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.97 E-value=6.2e-31 Score=226.28 Aligned_cols=270 Identities=22% Similarity=0.339 Sum_probs=187.9
Q ss_pred cCCCCCceec-CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEe---
Q psy15734 17 EKPDMPRFAE-PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLR--- 92 (314)
Q Consensus 17 ~~~~~p~~~~-~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~--- 92 (314)
.+..+|.|.. ++..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ...+.++.+.. ..+.|.|.
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g-~~l~------~~~~~~~~~~~---~~~~l~i~~~~ 81 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNS-RFFN------IAKDPRVSMRR---RSGTLVIDFRS 81 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETT-EECC------GGGCSSCBCCS---SSCCCBCCCTT
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECC-EEee------eecCCcceEec---CCceEEEEecc
Confidence 4457788875 577889999999999999999888999999954 3221 11122222211 11245554
Q ss_pred -eecCCCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceee
Q psy15734 93 -DVQETDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 93 -~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~ 168 (314)
+++.+|+|.|+|.+.+.... +..+.|.|..+|.+.... .....+.+|+.+.|.|.+ .+.|.+.+.|++.+...+.
T Consensus 82 ~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~ 160 (404)
T 3p3y_A 82 GGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKEN-LDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPIT 160 (404)
T ss_dssp TCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCC-CCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCC
T ss_pred CCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCC-CCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccC
Confidence 88899999999999875333 345677887777654432 344678899999999998 7789999999985433221
Q ss_pred cC----------------------CeeC------------------------------CCeEEcCC---CcceeecCccE
Q psy15734 169 YN----------------------GELV------------------------------PPMLTIPN---QLEGAFVSQTV 193 (314)
Q Consensus 169 ~~----------------------~~~~------------------------------~p~~~~~~---~~~~v~~g~~~ 193 (314)
.. +.+. +|.+..+. ....+.+|+++
T Consensus 161 ~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v 240 (404)
T 3p3y_A 161 QDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDL 240 (404)
T ss_dssp CCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCE
T ss_pred CCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCE
Confidence 11 1110 11111111 23457899999
Q ss_pred EEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 194 ELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 194 ~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
.|.|.+.|.|.|.+.|++++.... .... . ....+. .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+
T Consensus 241 ~l~C~~~g~p~~~v~W~~~~~~~~-~~~~-~-~~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 312 (404)
T 3p3y_A 241 LLECIASGVPTPDIAWYKKGGDLP-SDKA-K-FENFNK-----ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA 312 (404)
T ss_dssp EEECCBCCSSCCEEEEEETTBCCC-TTTE-E-EEGGGT-----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCcEEEEECCEECC-CCcc-c-ccccCc-----eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCC
Confidence 999999999999999999754432 2221 1 112233 8999999999999999999999999989999988876
Q ss_pred CCCeeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 274 DGDIFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 274 ~~~~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
| .+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 313 p--~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~ 348 (404)
T 3p3y_A 313 P--YWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMV 348 (404)
T ss_dssp E--EEEECCCCEEECTTCCEEEECEEEEESCCEEEEEE
T ss_pred C--eeeccCCcceeecCCcEEEEEEccccCCCceEEEE
Confidence 4 2211 234455667799999999999999953
No 14
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=1.6e-29 Score=236.16 Aligned_cols=239 Identities=24% Similarity=0.358 Sum_probs=175.5
Q ss_pred CCceecC--CcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 21 MPRFAEP--VANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 21 ~p~~~~~--~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+|.+... +....+.+|+++.|.|.+.+.|.+.+.|+|++...... .....+.++.... ++|.|.+++.+|
T Consensus 246 ~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~---~~~~~~~~~~~~~-----~~L~i~~v~~~D 317 (816)
T 3dmk_A 246 VPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRK---QAVVLNDRVKQVS-----GTLIIKDAVVED 317 (816)
T ss_dssp CCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCE---EECCCSSSEEEET-----TEEEECSCCGGG
T ss_pred CCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccC---cceecCCceEecc-----ceEEECCCCHhH
Confidence 4555433 24678899999999999999999999999953321100 1112233433221 279999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC---
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV--- 174 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~--- 174 (314)
+|.|+|.+.|. +.......|.|..++.+... +....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.......
T Consensus 318 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~~~~~~~~L~i~ 394 (816)
T 3dmk_A 318 SGKYLCVVNNSVGGESVETVLTVTAPLSAKID--PPTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGHSESVLRIE 394 (816)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECEEEEEEEE--SSEEECCTTSCEEEEEEEEEECCCEEEEEE-TTEECSCCSSEEEES
T ss_pred CEEEEEEEEcCCCceEEEEEEEEcCCCceeeC--CCceEecCCCCEEEEEEEeccCCCEEEEEE-CCEECCCCCCEEEEc
Confidence 99999999775 44455667777776665554 356778999999999999999999999999 666654332111
Q ss_pred ----------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC
Q psy15734 175 ----------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG 220 (314)
Q Consensus 175 ----------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~ 220 (314)
+|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+...
T Consensus 395 ~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~-g~~l~~~ 473 (816)
T 3dmk_A 395 SVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANN 473 (816)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEET-TEECCSC
T ss_pred CCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEEC-CEECCCC
Confidence 67777667777889999999999999999999999997 4444444
Q ss_pred CceeeeEe-eCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 221 DDYEDSRL-INGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 221 ~~~~~~~~-~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.++..... .......+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 474 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 525 (816)
T 3dmk_A 474 DRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY 525 (816)
T ss_dssp TTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEe
Confidence 44433211 1112234589999999999999999999999988888888774
No 15
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=208.88 Aligned_cols=229 Identities=16% Similarity=0.240 Sum_probs=168.9
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+ .+.|++++... ... ...+ ..|.|.+++.+|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~-------------~~~-~~~~---~~L~i~~~~~~d 68 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN-------------EMV-ENKK---NEWIQEKAEATR 68 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS-------------CEE-EECS---SEEEETTCCGGG
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce-------------eee-cCCC---ceEEEeccCHHh
Confidence 45688887888999999999999999987 89999966432 000 0111 379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCC-CceEEEcCCCceeecC-------
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE-PYVAWRREDGKAINYN------- 170 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~~~W~~~~~~~~~~~------- 170 (314)
+|.|+|.+.+ + ....+.|.|..+|..... +....+.+|+.+.|.|.+.+ |. +.+.|++.++..+...
T Consensus 69 ~G~Y~C~~~n-g-~~~~~~l~V~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~ 143 (290)
T 2o26_X 69 TGTYTCSNSN-G-LTSSIYVFVRDPAKLFLV--GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNP 143 (290)
T ss_dssp CEEEEEEESS-S-CEEEEEEEEECSSCCBCC--CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEET
T ss_pred CeEEEEEeeC-C-ccEEEEEEEeCCCccccc--ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCC
Confidence 9999999987 3 367778888887776632 45677889999999999986 77 8999965466554321
Q ss_pred --------------C-eeC-------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCce-eEE
Q psy15734 171 --------------G-ELV-------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL-NYW 209 (314)
Q Consensus 171 --------------~-~~~-------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-~~W 209 (314)
+ .+. +|.+...+....+.+|+++.|.|.+.|.|.|. +.|
T Consensus 144 ~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W 223 (290)
T 2o26_X 144 KAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMW 223 (290)
T ss_dssp TTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEE
T ss_pred CCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEE
Confidence 1 111 56676666667889999999999999999997 999
Q ss_pred ecCCCee---eecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 210 TNEKGDM---IITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 210 ~~~~~~~---~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
++++... +......... ....+...+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 224 LKMNPQPQHIAQVKHNSWHR-GDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp EEESSSEEECCCEECCEEEE-ETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred ecCCCCCccceeeccccccc-CceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 9986552 1111111111 11112334699999999999999999999999999999988887653
No 16
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.97 E-value=2.1e-30 Score=222.40 Aligned_cols=270 Identities=16% Similarity=0.205 Sum_probs=184.1
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
+..+|.|...+..+.+.+|+++.|.|.+.+ .+.+.+.|++++. .+.. ...++.... ..++|.|.+++.
T Consensus 3 v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~-~~~~-------~~~~~~~~~---~~~~L~i~~~~~ 71 (395)
T 1bih_A 3 VDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGK-SYNW-------QEHNAALRK---DEGSLVFLRPQA 71 (395)
T ss_dssp --CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSS-BCCT-------TTTTEEECT---TSCCEEESSCCG
T ss_pred cCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCc-Cccc-------ccceEEEec---CCceEEEecCCC
Confidence 457899999999999999999999999988 7889999999543 2211 111222211 223799999999
Q ss_pred CCCeEEEEEEecCCCc--ceeEEEEEEe--CCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCC--Cce---
Q psy15734 97 TDRGWYMCQINTVPMT--SQKGYLQVVV--PPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRRED--GKA--- 166 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~--~~~~~l~v~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~--~~~--- 166 (314)
+|+|.|+|.+.+.... +..+.|.|.. .|.+. +....+.+|+.+.|.|.+ .+.|.+.+.|++.+ ..+
T Consensus 72 ~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~----~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~ 147 (395)
T 1bih_A 72 SDEGHYQCFAETPAGVASSRVISFRKTYLIASPAK----THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNAD 147 (395)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCE----EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGC
T ss_pred CCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcC----CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccc
Confidence 9999999999765322 2234454433 34332 235567799999999996 78899999999943 011
Q ss_pred -------e--ec-------------CC---eeC--------C------C-----------------eEEcCCCcceeecC
Q psy15734 167 -------I--NY-------------NG---ELV--------P------P-----------------MLTIPNQLEGAFVS 190 (314)
Q Consensus 167 -------~--~~-------------~~---~~~--------~------p-----------------~~~~~~~~~~v~~g 190 (314)
. .. .+ .+. . . .....+....+.+|
T Consensus 148 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G 227 (395)
T 1bih_A 148 VTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAG 227 (395)
T ss_dssp CCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETT
T ss_pred cccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECC
Confidence 0 00 11 111 0 0 00001345568899
Q ss_pred ccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCcee-EEEEE
Q psy15734 191 QTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDG-FIKVY 269 (314)
Q Consensus 191 ~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~ 269 (314)
+.+.|.|.+.|.|.|.+.|++++ ..+......++...... ..+.|.|.++..+|+|.|+|.|.|..|.... .+.|.
T Consensus 228 ~~v~l~C~~~g~p~~~i~W~~~g-~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~ 304 (395)
T 1bih_A 228 DVTMIYCMYGSNPMGYPNYFKNG-KDVNGNPEDRITRHNRT--SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLT 304 (395)
T ss_dssp SCEEEEEEEECSSCCCCEEEETT-EECCCCTTSSEESCSSS--TTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEE
T ss_pred CcEEEEEEeccCCCCeEEEEECC-EEcCCCCceeEEEEecC--CCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEE
Confidence 99999999999999999999975 33332222222111100 0128999999999999999999999998765 88888
Q ss_pred EEecCCCeeEE-----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 270 VNLVDGDIFQI-----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 270 V~~~~~~~~~~-----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|..+| .+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 305 V~~~P--~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 345 (395)
T 1bih_A 305 VVSAP--KYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH 345 (395)
T ss_dssp EEEEE--EEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEE
T ss_pred EEcCC--ccccCCCcceEecCCCeEEEEEEECcccCCeeEEEE
Confidence 88764 2222 234455666799999999999999963
No 17
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.97 E-value=3.6e-30 Score=220.44 Aligned_cols=265 Identities=17% Similarity=0.233 Sum_probs=185.0
Q ss_pred CCceecCCcc-eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC-
Q psy15734 21 MPRFAEPVAN-VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD- 98 (314)
Q Consensus 21 ~p~~~~~~~~-~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d- 98 (314)
+|.|+..|.. +.+.+|+.+.|.|.+.+.|.+.+.|++.++..+.. ......... .++|.|.+++.+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~-------~~~~~~~~~----~~~L~i~~~~~~d~ 71 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGD-------VPGLRQISS----DGKLVFPPFRAEDY 71 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCC-------BTTTBEECS----TTEEEECCCCGGGC
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCcccc-------CCCceEEcC----CceEEecccChhhc
Confidence 5788877654 67889999999999998888999999955543321 111111111 1379999999997
Q ss_pred -----CeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCC---CceEEEcCCCceee
Q psy15734 99 -----RGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE---PYVAWRREDGKAIN 168 (314)
Q Consensus 99 -----~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---p~~~W~~~~~~~~~ 168 (314)
+|.|+|.+.+.... +..+.|.+..+|.+.... ....+.+|+.+.|.|.+.+.+. +.+.|++. +..+.
T Consensus 72 ~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~-~~~~~ 148 (388)
T 2v5m_A 72 RQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADV--NKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTD-EEENY 148 (388)
T ss_dssp CHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBC--CCEEEETTSCEEECCBCCTTTTTTEEEEEEEET-TCCEE
T ss_pred cccccCceEEEEEEccCCeEEecceEEEEccccccccCc--cceeeecCCcEEEEEECcCCCCCCcceEEEEeC-CCccc
Confidence 99999999875332 445677777777665443 4567889999999999987643 68999994 43321
Q ss_pred c-------------C--------------CeeC-------------C---CeEEc--------------CCCcceeecCc
Q psy15734 169 Y-------------N--------------GELV-------------P---PMLTI--------------PNQLEGAFVSQ 191 (314)
Q Consensus 169 ~-------------~--------------~~~~-------------~---p~~~~--------------~~~~~~v~~g~ 191 (314)
. + +.+. . ..+.+ ......+.+|+
T Consensus 149 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~ 228 (388)
T 2v5m_A 149 FPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAH 228 (388)
T ss_dssp CSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTS
T ss_pred ccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCC
Confidence 1 0 1110 0 01110 11334578899
Q ss_pred cEEEEEEEeecCCceeEEecCCCeee-----ecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEE
Q psy15734 192 TVELHCHTEAFPASLNYWTNEKGDMI-----ITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 192 ~~~l~C~~~g~p~p~~~W~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
++.|.|.+.|.|.|.+.|++++.... ....++ ...++ .|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 229 ~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~---~~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 300 (388)
T 2v5m_A 229 TISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRV---KQVSG-----TLIIKDAVVEDSGKYLCVVNNSVGGESVET 300 (388)
T ss_dssp CEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSE---EEETT-----EEEESSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred cEEEEEECCCCCCCEEEEEecCCCCcccccccccCce---ecccC-----EEEECcCCHHHCeEEEEEEecCCCceeEEE
Confidence 99999999999999999999643211 111111 12233 899999999999999999999999988899
Q ss_pred EEEEEecCCCeeEE--EEccccccEeEEEEEeeccCCCccceE
Q psy15734 267 KVYVNLVDGDIFQI--RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 267 ~l~V~~~~~~~~~~--~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|.|..++...+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 301 ~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~ 343 (388)
T 2v5m_A 301 VLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMK 343 (388)
T ss_dssp EEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEE
T ss_pred EEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEE
Confidence 99888764321111 234455666799999999999999963
No 18
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.97 E-value=1.9e-29 Score=235.65 Aligned_cols=272 Identities=21% Similarity=0.304 Sum_probs=195.8
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEE----eCCceeEEEEEeee
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSIT----FNDHRSWFLHLRDV 94 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~i~~~ 94 (314)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++ ..+ ..+.++... .++.....|.|.++
T Consensus 427 ~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g-~~l--------~~~~~~~~~~~~~~~~~~~~~L~i~~v 497 (816)
T 3dmk_A 427 FDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDG-KKI--------ANNDRYQVGQYVTVNGDVVSYLNITSV 497 (816)
T ss_dssp SCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETT-EEC--------CSCTTEEEEEEECTTSCEEEEEEESSC
T ss_pred cCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECC-EEC--------CCCCCcccccEEecCCCcEEEEEEeec
Confidence 46777877788889999999999999999999999999954 322 122232221 12222347999999
Q ss_pred cCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC--
Q psy15734 95 QETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG-- 171 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~-- 171 (314)
+.+|+|.|+|.+.|. +.......|.|..+|.+.. .....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....
T Consensus 498 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~---~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k-~~~~l~~~~~~ 573 (816)
T 3dmk_A 498 HANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ---MEKKAIVAGETLIVTCPVAGYPIDSIVWER-DNRALPINRKQ 573 (816)
T ss_dssp CTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECC---CCCEEEETTCCEEEECCEECSSEEEEEEEE-TTEESCCSTTE
T ss_pred cccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEc---cCCeEEecCCeEEEEEEecCCCCCEEEEEE-CCeEcccCCce
Confidence 999999999999775 4556677888888886543 345678899999999999999999999999 555443221
Q ss_pred ------eeC-----------------------------------CCeEE-cCCCcceeecCccEEEEEEEeecCCc-eeE
Q psy15734 172 ------ELV-----------------------------------PPMLT-IPNQLEGAFVSQTVELHCHTEAFPAS-LNY 208 (314)
Q Consensus 172 ------~~~-----------------------------------~p~~~-~~~~~~~v~~g~~~~l~C~~~g~p~p-~~~ 208 (314)
.+. +|.+. .......+.+|+++.|.|.+.+.|+| .+.
T Consensus 574 ~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~ 653 (816)
T 3dmk_A 574 KVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNID 653 (816)
T ss_dssp EECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEE
T ss_pred EEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEE
Confidence 100 22221 22344568899999999999876655 899
Q ss_pred EecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEE--EEcccc
Q psy15734 209 WTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQI--RKMSRL 286 (314)
Q Consensus 209 W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~--~~~~~~ 286 (314)
|++++. .+.....+....... ..+.|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.-.... ..+..+
T Consensus 654 W~~~g~-~l~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G 729 (816)
T 3dmk_A 654 WTLDGQ-AISEDLGITTSRVGR---RGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQG 729 (816)
T ss_dssp EEETTB-CCCGGGTCEEEEETT---TEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETT
T ss_pred EEECCe-EcCCCCCeeEEEcCC---CeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCC
Confidence 999744 333333333322222 13589999999999999999999999999999999988764211111 123345
Q ss_pred ccEeEEEEEeeccCCCccceE
Q psy15734 287 HMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 287 ~~g~~~C~a~~~~~~~~~w~v 307 (314)
+...+.|.+.+.|.|.+.|..
T Consensus 730 ~~v~l~C~~~g~P~p~i~W~k 750 (816)
T 3dmk_A 730 SDAKVECKADGFPKPQVTWKK 750 (816)
T ss_dssp CCEEEECEEEEESCCEEECCE
T ss_pred CcEEEEEEEecCCCCeEEEEe
Confidence 566799999999999999965
No 19
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.97 E-value=4.5e-30 Score=219.41 Aligned_cols=263 Identities=18% Similarity=0.202 Sum_probs=187.3
Q ss_pred CCCceecCCcceEE---EcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 20 DMPRFAEPVANVTA---TVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 20 ~~p~~~~~~~~~~v---~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.+|.|...|....+ .+|+++.|.|.+.+.|.+.+.|++++ ..+. ...+.++.+.. +.|.|.++..
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g-~~~~------~~~~~~~~~~~-----~~L~i~~~~~ 70 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNG-TELK------MGPDSRYRLVA-----GDLVISNPVK 70 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETT-EECC------CSTTSSEEEET-----TEEEEESCCH
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECC-EECC------cCCCccEEeeC-----CeEEEecccc
Confidence 36888888888877 78999999999998888999999954 3321 11234554432 2799999986
Q ss_pred -CCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceee--cC
Q psy15734 97 -TDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAIN--YN 170 (314)
Q Consensus 97 -~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~--~~ 170 (314)
+|+|.|+|.+.+.... +....|.|...+.+.... .....+.+|+.+.|.|.+ .+.|.+.+.|++ ++.++. ..
T Consensus 71 ~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~-~~~~~~~~~~ 148 (382)
T 1cs6_A 71 AKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEE-RDPVKITEGWGVMFTCSPPPHYPALSYRWLL-NEFPNFIPAD 148 (382)
T ss_dssp HHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSC-CCCEEEETTSCEEECCCCCSEESCCEEEEEE-SSTTCBCCCC
T ss_pred cccCEEEEEEEEcCCcEEEecceEEEeeccccccccC-CCceEEecCCcEEEEeCCCCCCCCcEEEEEE-CCCccccccC
Confidence 9999999999775322 334667776655544332 356678999999999996 456889999998 443321 00
Q ss_pred ---------CeeC--------------------------------------------CCeEEc-CCCcceeecCccEEEE
Q psy15734 171 ---------GELV--------------------------------------------PPMLTI-PNQLEGAFVSQTVELH 196 (314)
Q Consensus 171 ---------~~~~--------------------------------------------~p~~~~-~~~~~~v~~g~~~~l~ 196 (314)
+.+. +|.+.. .+....+.+|+++.|.
T Consensus 149 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~ 228 (382)
T 1cs6_A 149 GRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLE 228 (382)
T ss_dssp SSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEE
T ss_pred ceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEE
Confidence 0000 122222 2345678899999999
Q ss_pred EEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 197 CHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 197 C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.+.|.|.|.+.|+++++.... .. ...+. .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.-
T Consensus 229 C~~~g~p~~~i~W~~~~~~~~~---~~---~~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 297 (382)
T 1cs6_A 229 CFAFGNPVPQIKWRKLDGSQTS---KW---LSSEP-----LLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDW 297 (382)
T ss_dssp CEEEEESCCEEEEEECCSCCSC---CC---SBSSS-----EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred EEEccCCCCEEEEEECCccccc---EE---ecCCc-----EEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCc
Confidence 9999999999999997654221 10 11222 8999999999999999999999999888888888765421
Q ss_pred eeE--EEEccccccEeEEEEEeeccCCCccceE
Q psy15734 277 IFQ--IRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 277 ~~~--~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
... ...+..++...+.|.+.+.|.|.+.|..
T Consensus 298 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 330 (382)
T 1cs6_A 298 LDVITDTEADIGSDLRWSCVASGKPRPAVRWLR 330 (382)
T ss_dssp EECCCCEEEETTCCEEEECEEEEESCCEEEEEE
T ss_pred ccCCCccEEcCCCeEEEEEEeeeecCCEEEEEE
Confidence 110 1233445566799999999999999953
No 20
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.97 E-value=1.1e-29 Score=218.34 Aligned_cols=240 Identities=23% Similarity=0.422 Sum_probs=180.0
Q ss_pred eccCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 15 KCEKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 15 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
.+.+..+|.+...+....+.+|+++.|.|.+.+.+.+.+.|++++.. +.. .....+...... +.|.|.++
T Consensus 115 ~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~~-----~~~~~~~~~~~~----~~L~i~~~ 184 (403)
T 3laf_A 115 KVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQD-LNP-----IPGDSRVVVLPS----GALQISRL 184 (403)
T ss_dssp EEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSB-CCC-----CTTCCSEEECTT----SCEEECSC
T ss_pred EEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEe-ccc-----cCCceEEEEcCC----ceEEEccc
Confidence 33445678888888899999999999999998888889999996543 210 112223332222 26999999
Q ss_pred cCCCCeEEEEEEecCCC--cceeEEEEEEeCCcee----eecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceee
Q psy15734 95 QETDRGWYMCQINTVPM--TSQKGYLQVVVPPRIL----LDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p~~~----~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~ 168 (314)
+.+|+|.|+|.+.+... ......+.|...|... ....+....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.
T Consensus 185 ~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~-~~~~~~ 263 (403)
T 3laf_A 185 QPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLR-GEEVIQ 263 (403)
T ss_dssp CGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred ccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEE-CCeecc
Confidence 99999999999976532 3345677887766432 1223456678899999999999999999999999 555443
Q ss_pred cCCe---------eC---------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCce
Q psy15734 169 YNGE---------LV---------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL 206 (314)
Q Consensus 169 ~~~~---------~~---------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~ 206 (314)
.... +. +|.+...+....+.+|+++.|.|.+.|.|.|.
T Consensus 264 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~ 343 (403)
T 3laf_A 264 LRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPT 343 (403)
T ss_dssp CSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCE
T ss_pred CCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCE
Confidence 2111 10 67777777778889999999999999999999
Q ss_pred eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 207 NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 207 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
+.|++++ ..+.....+.+ ..+. .|.|.++..+|+|.|+|.|.|..|....++.|.|..+
T Consensus 344 v~W~~~g-~~~~~~~~~~~--~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 344 VNWMKNG-DVVIPSDYFQI--VGGS-----NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp EEEEETT-EECCCSSSEEE--ETTT-----EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred EEEEECC-EECCCCCcEEE--ecCc-----cEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 9999974 44444443332 2333 8999999999999999999999999999999988654
No 21
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=1.6e-28 Score=223.56 Aligned_cols=258 Identities=19% Similarity=0.226 Sum_probs=184.6
Q ss_pred cCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEE
Q psy15734 26 EPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQ 105 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 105 (314)
.......+..|+.+.|.|.+.+.+ +.+.|++++. .+ ..+.++.+...+ ..|.|.+++.+|+|.|+|.
T Consensus 294 ~~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~-~l--------~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~ 360 (642)
T 1e07_A 294 TSNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQ-SL--------PVSPRLQLSNDN---RTLTLLSVTRNDVGPYECG 360 (642)
T ss_pred EcCCceeEecCCcEEEEEECCCCC-ccEEEEECCc-cC--------CCcCCEEEeCCC---CEEEEeccCcccCeeEEEE
Confidence 334445566688899999998865 6999999543 22 223344443221 3799999999999999999
Q ss_pred EecCCC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC---------
Q psy15734 106 INTVPM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV--------- 174 (314)
Q Consensus 106 ~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~--------- 174 (314)
+.|... .+..+.|.|..+|...... +....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+.....+.
T Consensus 361 a~n~~g~~~s~~~~l~V~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~~~~~~~L~i~~~~~~d~ 438 (642)
T 1e07_A 361 IQNELSVDHSDPVILNVLYGPDDPTIS-PSYTYYRPGVNLSLSCHAASNPPAQYSWLI-DGNIQQHTQELFISNITEKNS 438 (642)
T ss_pred EeCCCCCcceeeEEEEEEcCCCCCeec-CCceEecCCCcEEEEEEcCccCCCeEEEEE-CCEEcCCCceEEEccCChhhC
Confidence 977533 2445778888777654332 345678899999999999999999999999 666654332221
Q ss_pred -----------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceee
Q psy15734 175 -----------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYED 225 (314)
Q Consensus 175 -----------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~ 225 (314)
+|.+.. .....+.+|+++.|.|.+.+ |.+.+.|+++ +..+....++.+
T Consensus 439 G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~-g~~l~~~~~~~~ 515 (642)
T 1e07_A 439 GLYTCQANNSASGHSRTTVKTITVSAELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVN-GQSLPVSPRLQL 515 (642)
T ss_pred eEEEEEEEcCCCCCcccceEEEEEeccCCCceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEEC-CEeCCCCCcEEE
Confidence 222222 23355779999999999994 8899999997 444444444433
Q ss_pred eEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCce-eEEEEEEEecCCCeeEE---EEccccccEeEEEEEeeccCC
Q psy15734 226 SRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETD-GFIKVYVNLVDGDIFQI---RKMSRLHMGAYLCIASNGVVP 301 (314)
Q Consensus 226 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~---~~~~~~~~g~~~C~a~~~~~~ 301 (314)
.. .+ ..|.|.++..+|+|.|+|.|.|..|... ..+.|.|...|..+... ..+..++...+.|.+.+.|+|
T Consensus 516 ~~-~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 589 (642)
T 1e07_A 516 SN-GN-----RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSP 589 (642)
T ss_pred cC-CC-----cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCC
Confidence 21 22 3999999999999999999999999764 46888888765433322 223345556799999999999
Q ss_pred CccceE
Q psy15734 302 SVSHRI 307 (314)
Q Consensus 302 ~~~w~v 307 (314)
.+.|..
T Consensus 590 ~v~W~~ 595 (642)
T 1e07_A 590 QYSWRI 595 (642)
T ss_pred eEEEEE
Confidence 999964
No 22
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=214.54 Aligned_cols=235 Identities=19% Similarity=0.300 Sum_probs=163.2
Q ss_pred ceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeee------e--eecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 30 NVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHK------V--VTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
.+++.+|++++|.|.+.+ .+.+.+.|+|.++......... . .....|+.+.......++|.|.+++.+|+|
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 87 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSG 87 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCE
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCE
Confidence 578999999999999865 4556899999654322111000 0 011345554433334457999999999999
Q ss_pred EEEEEEecCC--CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCCee----
Q psy15734 101 WYMCQINTVP--MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNGEL---- 173 (314)
Q Consensus 101 ~Y~C~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~~~---- 173 (314)
.|+|.+.+.. .......+.+...|.......+.......|+.+.|.|.+ .+.|.|.+.|++ ++..+......
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~-~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 88 KYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEG-DLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECC-CSSBCCEEEEECTTS
T ss_pred EEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEE-CCcccccccceeeee
Confidence 9999997653 334556677777777655444555556678899999975 578999999998 55443211100
Q ss_pred --------C-----------------------------------CCeEEcC-CCcceeecCccEEEEEEEeecCCc-eeE
Q psy15734 174 --------V-----------------------------------PPMLTIP-NQLEGAFVSQTVELHCHTEAFPAS-LNY 208 (314)
Q Consensus 174 --------~-----------------------------------~p~~~~~-~~~~~v~~g~~~~l~C~~~g~p~p-~~~ 208 (314)
. +|.+... .....+..|+++.|.|.+.|.|+| .+.
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~ 246 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSV 246 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEE
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEE
Confidence 0 4444433 334456678999999999999998 689
Q ss_pred EecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCC
Q psy15734 209 WTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 209 W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 275 (314)
|+++++.+.. ... ..++ ..|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.
T Consensus 247 W~k~~~~~~~-~~~-----~~~~----~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 247 WSRLDGQWPD-GLL-----ASDN----TLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp CCBSSSCCCS-SCB-----CSTT----EEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred EEECCeECCC-cEE-----EcCC----eEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 9997654321 110 1122 2677889999999999999999999999999999988764
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.97 E-value=3.2e-29 Score=221.91 Aligned_cols=257 Identities=14% Similarity=0.137 Sum_probs=165.6
Q ss_pred cceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEec
Q psy15734 29 ANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINT 108 (314)
Q Consensus 29 ~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (314)
..+.|.+|++++|.|.+.+.+...+.|++++.. +... ..+..+.+ ...+|.|.+++.+|+|.|+|.+.+
T Consensus 56 ~~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~-l~~~--~~~~~~~r--------~~~SL~I~~v~~~D~G~Y~C~~~n 124 (527)
T 3qs9_E 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKHSS-LNCQ--PHFDLQNR--------GVVSMVILKMTETQAGEYLLFIQS 124 (527)
T ss_dssp CEEEECSSCCEEEEEECSCCSSCEEEEEETTEE-ECCC--CBC-------------CEEEEEESSCCSSSCSEEEEEEEC
T ss_pred eeEEEeccccEEEEEEEecCCceeEEEEecCCc-cCcc--cccCCCcc--------eEEEEEECcCChhhCeeEEEEEEe
Confidence 389999999999999999888899999996432 1110 00111111 123699999999999999999976
Q ss_pred CCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec-------------------
Q psy15734 109 VPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY------------------- 169 (314)
Q Consensus 109 ~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~------------------- 169 (314)
.. ......+.|.+.|.....+ ........++.+.|.|.+.|+|.|.+.|++.+ ..+..
T Consensus 125 ~~-~~~~~~~~v~v~~~~~~~~-~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 201 (527)
T 3qs9_E 125 EA-TNYTILFTVSIRNTLLYTL-RRPYFRKMENQDALVCISESVPEPIVEWVLCD-SQGESCKEESPAVVKKEEKVLHEL 201 (527)
T ss_dssp ---CEEEEEEEEEEC-----CE-EEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCC
T ss_pred cc-ccEEEEEEEEECCceeecc-CCCcEEecCCceEEEEEEceecCCeEEEEECC-CCCccccccCCcEEEEeeeecccc
Confidence 42 3334445555544432211 12223455777889999999999999999843 22210
Q ss_pred -CCeeC---------------------CCeEEcCCCcceeecCccEEEEEEEe-ecCCceeEEecCCCeeeecCCceeee
Q psy15734 170 -NGELV---------------------PPMLTIPNQLEGAFVSQTVELHCHTE-AFPASLNYWTNEKGDMIITGDDYEDS 226 (314)
Q Consensus 170 -~~~~~---------------------~p~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~~~W~~~~~~~~~~~~~~~~~ 226 (314)
.+.+. +|.+ ++....+.+|+++.|.|.+. |.|.|.+.|++++.. +.....+...
T Consensus 202 d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~-l~~~~~~~~~ 278 (527)
T 3qs9_E 202 FGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA-LEEGNYFEMS 278 (527)
T ss_dssp CSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSC-CCGGGEEEEE
T ss_pred CCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEE-CCCCceeeee
Confidence 00000 2222 45567788999999999996 899999999997543 3222222221
Q ss_pred Eee-CC-eeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEE------EEccccccEeEEEEEeec
Q psy15734 227 RLI-NG-YSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQI------RKMSRLHMGAYLCIASNG 298 (314)
Q Consensus 227 ~~~-~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~------~~~~~~~~g~~~C~a~~~ 298 (314)
... +. .....+|.|.++..+|+|.|+|.|.|. ....+.|.|..++ .+.+ ..+..++...+.|.+.+.
T Consensus 279 ~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p--~i~~~~~~~~~~v~~G~~v~L~C~~~g~ 353 (527)
T 3qs9_E 279 TYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKG--FINATNSSEDYEIDQYEEFCFSVRFKAY 353 (527)
T ss_dssp EEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--C--EEECCCSCCEECCCTTCCCCEEEEEEEE
T ss_pred eeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccC--ccccccCcccEEEcCCCeEEEEEEEEec
Confidence 111 11 223457999999999999999999998 5667777776543 2221 223344555699999999
Q ss_pred cCCCccceE
Q psy15734 299 VVPSVSHRI 307 (314)
Q Consensus 299 ~~~~~~w~v 307 (314)
|.|.+.|..
T Consensus 354 P~p~i~W~k 362 (527)
T 3qs9_E 354 PQIRCTWTF 362 (527)
T ss_dssp SCCEEEEEE
T ss_pred CCCEEEEEE
Confidence 999999963
No 24
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=215.53 Aligned_cols=235 Identities=17% Similarity=0.242 Sum_probs=160.2
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENL-REYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
..+|.|..+. .+.+.+|+++.|.|.+.+. +.+.+.|++++ ..+ ..+.++.+.. ....|.|.+++.+
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~-~~~--------~~~~~~~~~~---~~~~L~i~~~~~~ 71 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDE-REI--------SVDEKHDFKD---GICTLLITEFSKK 71 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETT-EEE--------CCSCC--------CCEEEEETTCCST
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECC-eEc--------CCCCcEEEEC---CeEEEEEccCCcc
Confidence 4578888665 5899999999999999886 77899999954 332 2223333321 2248999999999
Q ss_pred CCeEEEEEEecCCC-cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecc----------cCCCceEEEcCCCce
Q psy15734 98 DRGWYMCQINTVPM-TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVG----------YPEPYVAWRREDGKA 166 (314)
Q Consensus 98 d~G~Y~C~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~----------~p~p~~~W~~~~~~~ 166 (314)
|+|.|+|.+.+... ....+.|.|..+|.+... +....+..|+.+.|.|.+.+ .|.+.+.|++ ++..
T Consensus 72 d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~--~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~-~~~~ 148 (317)
T 2y25_A 72 DAGIYEVILKDDRGKDKSRLKLVDEAFKELMME--VCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSH-NGSA 148 (317)
T ss_dssp TCSCEEEEEESSSCEEEEEECCSTHHHHHHHHH--HHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEE-SSSB
T ss_pred cCeEEEEEEECCCCcEEEEEEEEEecCcccccc--CCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEE-CCEE
Confidence 99999999976532 223333333333322211 12233445666777776665 6889999999 5555
Q ss_pred eecCCeeC----------------------------------------------------------------CCeE-EcC
Q psy15734 167 INYNGELV----------------------------------------------------------------PPML-TIP 181 (314)
Q Consensus 167 ~~~~~~~~----------------------------------------------------------------~p~~-~~~ 181 (314)
+....... +|.+ ...
T Consensus 149 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 228 (317)
T 2y25_A 149 IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL 228 (317)
T ss_dssp CCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBC
T ss_pred CCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccC
Confidence 43221110 1222 223
Q ss_pred CCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
+....+.+|+++.|.|.+.|.|.|.+.|++++ ..+....++.+....+. .+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g-~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 304 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNE-KALASDDHCNLKFEAGR---TAYFTINGVSTADSGKYGLVVKNKYGS 304 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESS-SEECCCSSEEECCBTTT---EEEEEEBSCCSTTCEEEEEEEEETTEE
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECC-EeCCCCCcEEEEEcCCC---EEEEEECCCCHHHCEEEEEEEEeCCCe
Confidence 45568899999999999999999999999974 44444444444322122 359999999999999999999999999
Q ss_pred ceeEEEEEEEec
Q psy15734 262 TDGFIKVYVNLV 273 (314)
Q Consensus 262 ~~~~~~l~V~~~ 273 (314)
....+.|.|..+
T Consensus 305 ~~~~~~l~V~~P 316 (317)
T 2y25_A 305 ETSDFTVSVFIP 316 (317)
T ss_dssp EEEEEEEEEECC
T ss_pred EEEEEEEEEEcC
Confidence 999999988754
No 25
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.97 E-value=3.6e-28 Score=221.22 Aligned_cols=262 Identities=19% Similarity=0.228 Sum_probs=184.1
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
.|.+.. .....+.+|+.+.|.|.+.+ +.+.+.|++++ ..+ ..+.++.+... ...|.|.+++.+|+|
T Consensus 112 ~p~i~~-~~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g-~~l--------~~~~~~~~~~~---~~~L~i~~~~~~d~G 177 (642)
T 1e07_A 112 KPSISS-NNSKPVEDKDAVAFTCEPET-QDATYLWWVNN-QSL--------PVSPRLQLSNG---NRTLTLFNVTRNDTA 177 (642)
T ss_pred CCcEEc-cCceeEecCCcEEEEEECCC-CCeeEEEEECC-eEC--------CCCCceEEcCC---CCEEEEeCCCcccCe
Confidence 455443 33566889999999999988 88999999954 322 22334444322 237999999999999
Q ss_pred EEEEEEecCCC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC----
Q psy15734 101 WYMCQINTVPM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV---- 174 (314)
Q Consensus 101 ~Y~C~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~---- 174 (314)
.|+|.+.+... .+..+.|.|..+|...... +....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+.....+.
T Consensus 178 ~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~-~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~-~g~~i~~~~~L~i~~~ 255 (642)
T 1e07_A 178 SYKCETQNPVSARRSDSVILNVLYGPDAPTIS-PLNTSYRSGENLNLSCHAASNPPAQYSWFV-NGTFQQSTQELFIPNI 255 (642)
T ss_pred eEEEEEecCCCCcccceEEEEEEeCCCCcEEe-cCCcccccCCEEEEEEEcCCCCCcEEEEEE-CCeEcccCCceEEecc
Confidence 99999976532 3455778888665543322 345568899999999999999999999999 666654332211
Q ss_pred ----------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC
Q psy15734 175 ----------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG 220 (314)
Q Consensus 175 ----------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~ 220 (314)
+|.+.. +....+..|+++.|.|.+.+.| +.+.|++++.. +...
T Consensus 256 ~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g~~-l~~~ 332 (642)
T 1e07_A 256 TVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITS-NNSNPVEDEDAVALTCEPEIQN-TTYLWWVNNQS-LPVS 332 (642)
T ss_pred cccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEc-CCceeEecCCcEEEEEECCCCC-ccEEEEECCcc-CCCc
Confidence 123322 2233455688899999999987 79999997443 3333
Q ss_pred CceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecCCCeeEE---EEccccccEeEEEEEe
Q psy15734 221 DDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLVDGDIFQI---RKMSRLHMGAYLCIAS 296 (314)
Q Consensus 221 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~---~~~~~~~~g~~~C~a~ 296 (314)
.++.+. ..++ .|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...|..+... ..+..++...+.|.+.
T Consensus 333 ~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 406 (642)
T 1e07_A 333 PRLQLS-NDNR-----TLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAA 406 (642)
T ss_pred CCEEEe-CCCC-----EEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcC
Confidence 333332 1233 89999999999999999999999875 456788888665432221 1234455567999999
Q ss_pred eccCCCccceE
Q psy15734 297 NGVVPSVSHRI 307 (314)
Q Consensus 297 ~~~~~~~~w~v 307 (314)
+.|+|.+.|..
T Consensus 407 g~p~~~i~W~~ 417 (642)
T 1e07_A 407 SNPPAQYSWLI 417 (642)
T ss_pred ccCCCeEEEEE
Confidence 99999999964
No 26
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=7.6e-29 Score=203.76 Aligned_cols=238 Identities=18% Similarity=0.264 Sum_probs=157.8
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
|.|......+.+.+|+++.|.|.+.+. +.|++++.. +. .+......+.....|.|.+++.+|+|.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-~~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~ 65 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQE-PP----------QEMAKAQDGTFSSVLTLTNLTGLDTGE 65 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBC-CS----------EEEEECTTSCEEEEEEECSCCGGGCEE
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCC-cc----------cceeccCCCceeEEEEEccCChhhCEE
Confidence 455556667889999999999999874 999996543 21 111111122223489999999999999
Q ss_pred EEEEEecCC-C-cceeEEEEEEeC-Cce-eeecCcc--eeEEecCceEEEEEEecccCCCceEEEcCC-CceeecC----
Q psy15734 102 YMCQINTVP-M-TSQKGYLQVVVP-PRI-LLDRTST--DVVVREGTEVTLECSAVGYPEPYVAWRRED-GKAINYN---- 170 (314)
Q Consensus 102 Y~C~~~~~~-~-~~~~~~l~v~~~-p~~-~~~~~~~--~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~-~~~~~~~---- 170 (314)
|+|.+.+.. . ......+.|.+. |.. .....+. ...+.+|+.+.|.|.+. .|.|.+.|++.+ +..+...
T Consensus 66 Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~~~~ 144 (289)
T 3mjg_X 66 YFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPYDHQ 144 (289)
T ss_dssp EEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCEETT
T ss_pred EEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceeecCC
Confidence 999997643 1 223334444443 222 1111111 26788999999999998 678899999853 3332210
Q ss_pred ---------CeeC-----------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee
Q psy15734 171 ---------GELV-----------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII 218 (314)
Q Consensus 171 ---------~~~~-----------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~ 218 (314)
+.+. +|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++.....
T Consensus 145 ~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~ 224 (289)
T 3mjg_X 145 RGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGR 224 (289)
T ss_dssp TEEEECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSC
T ss_pred cCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCC
Confidence 1110 34444444556789999999999999999999999986432211
Q ss_pred cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCC
Q psy15734 219 TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 219 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 275 (314)
.................+.|.|.++..+|+|.|+|.|.|..|...+++.|.|...+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 225 LVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp CCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred cccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 111111111111123456999999999999999999999999999999999987754
No 27
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.97 E-value=2.3e-29 Score=213.60 Aligned_cols=257 Identities=16% Similarity=0.193 Sum_probs=172.9
Q ss_pred ceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeee-----ecCcCEEEEeC--CceeEEEEEeeecCCCCeEE
Q psy15734 30 NVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVV-----TQNKRVSITFN--DHRSWFLHLRDVQETDRGWY 102 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y 102 (314)
.+.+.+|+++.|.|.+.+.+.+.+.|++++...+........ ....|+.+..+ ....+.|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 468899999999999998888999999966432322111111 11234443220 11233799999999999999
Q ss_pred EEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC--------
Q psy15734 103 MCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV-------- 174 (314)
Q Consensus 103 ~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~-------- 174 (314)
+|.+.+. ...+.|.|.. +... ....+.+|+.+.|.|.+.+.|.|.+.|++.++........+.
T Consensus 83 ~C~~~n~---~~~~~l~V~~---~~~~---~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d 153 (363)
T 1wio_A 83 ICEVEDQ---KEEVQLLVFG---LTAN---SDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQD 153 (363)
T ss_dssp EEEETTE---EEEEEEEEEE---EEES---SCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGG
T ss_pred EEEEEEC---CCcEEEEEEe---CCCC---CceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhc
Confidence 9999653 2355666654 2221 123568999999999999999999999995433222221111
Q ss_pred -----------------CCeE--EcCC---CcceeecCccEEEEEEEee-----cCCceeEEecCCCeeeec-------C
Q psy15734 175 -----------------PPML--TIPN---QLEGAFVSQTVELHCHTEA-----FPASLNYWTNEKGDMIIT-------G 220 (314)
Q Consensus 175 -----------------~p~~--~~~~---~~~~v~~g~~~~l~C~~~g-----~p~p~~~W~~~~~~~~~~-------~ 220 (314)
...+ ...+ ....+.+|+.+.|.|.+.+ .|.|.+.|++++...... .
T Consensus 154 ~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~ 233 (363)
T 1wio_A 154 SGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKN 233 (363)
T ss_dssp CEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECS
T ss_pred CCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecC
Confidence 1111 1111 4446778999999998888 889999999975433221 2
Q ss_pred CceeeeEeeCC------eeeEEEEEEeecCCCCCeEEEEEEeeC--CCCceeEEEEEEEecCCCeeEEEEccccccEeEE
Q psy15734 221 DDYEDSRLING------YSCHMTLKIRSILSHQFGSYRCVAVNA--LGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYL 292 (314)
Q Consensus 221 ~~~~~~~~~~~------~~~~s~L~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~ 292 (314)
..+.+...... ......|.|.++..+|+|.|+|.|.|. .|.....+.|.|.... ++...++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~-----------g~~~~l~ 302 (363)
T 1wio_A 234 KEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRAT-----------QLQKNLT 302 (363)
T ss_dssp SCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEEC-----------CCSSSEE
T ss_pred CeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEec-----------CCCeeEE
Confidence 33322211100 000238999999999999999999999 9988889888887332 3446799
Q ss_pred EEEeeccCCC--ccce
Q psy15734 293 CIASNGVVPS--VSHR 306 (314)
Q Consensus 293 C~a~~~~~~~--~~w~ 306 (314)
|.+.+.|+|. +.|.
T Consensus 303 C~~~g~p~p~~~i~W~ 318 (363)
T 1wio_A 303 CEVWGPTSPKLMLSLK 318 (363)
T ss_dssp EEEESSCCTTCCEEEE
T ss_pred EEEccccCCCccEEEE
Confidence 9999999898 8885
No 28
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=8.8e-29 Score=207.04 Aligned_cols=243 Identities=15% Similarity=0.236 Sum_probs=155.7
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCC----ceeEEEEEeeec
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENL-REYKVAWVKMITQTILSIHHKVVTQNKRVSITFND----HRSWFLHLRDVQ 95 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~ 95 (314)
...|..++..+.+.+|+++.|.|.+.+. +.+.+.|++++................++....+. ...+.|.|.+++
T Consensus 3 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 3 ELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred eeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCc
Confidence 3567778889999999999999999886 77899999965321110000000112244433221 234479999999
Q ss_pred CCCCeEEEEEEecCCCc------ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC--ceEEEcCCCcee
Q psy15734 96 ETDRGWYMCQINTVPMT------SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP--YVAWRREDGKAI 167 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~~~W~~~~~~~~ 167 (314)
.+|+|.|+|.+.+.+.. .....|.|..+|.......+ ...+.+|+.+.|.|.+.+.|++ .+.|++ ++..+
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k-~g~~l 160 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-AARATPQHTVSFTCESHGFSPRDITLKWFK-NGNEL 160 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-SSCBCTTCEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-ccccCCCCEEEEEEEEeCccCCCcEEEEEE-CCEEc
Confidence 99999999999775432 13457888776654332212 3557889999999999998766 899999 66554
Q ss_pred ecCC-----------------------------eeC-------------------------CCeEEcCCCcceeecCccE
Q psy15734 168 NYNG-----------------------------ELV-------------------------PPMLTIPNQLEGAFVSQTV 193 (314)
Q Consensus 168 ~~~~-----------------------------~~~-------------------------~p~~~~~~~~~~v~~g~~~ 193 (314)
.... .+. +|.+...+.. +.+|+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v 238 (327)
T 2wng_A 161 SDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQV 238 (327)
T ss_dssp CCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCC
T ss_pred cccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcE
Confidence 3111 000 4444433332 6789999
Q ss_pred EEEEEEeecCCc--eeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEE
Q psy15734 194 ELHCHTEAFPAS--LNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGSYRCVAVNALGET-DGFIKV 268 (314)
Q Consensus 194 ~l~C~~~g~p~p--~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l 268 (314)
.|.|.+.|.|++ .+.|++++.. +............++ |...+.|.|.++..+|+|.|+|.|.|..|.. .+++.+
T Consensus 239 ~l~C~~~g~~p~~~~v~W~k~g~~-l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~ 316 (327)
T 2wng_A 239 NVTCQVRKFYPQRLQLTWLENGNV-SRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDL 316 (327)
T ss_dssp EEEEEEEEEBSSCEEEEEEETTEE-EEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEEC
T ss_pred EEEEEEccccCCCcEEEEEECCeE-ccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEE
Confidence 999999996544 7999997443 333222223333333 5666789999999999999999999999865 444433
No 29
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.96 E-value=2.4e-28 Score=200.73 Aligned_cols=232 Identities=18% Similarity=0.193 Sum_probs=165.2
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.+...+..+.+.+|+++.|.|.+.+ .+.|++++.... .... ......|.|.+++.+|+
T Consensus 3 p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~--------------~~~~-~~~~~~L~i~~~~~~d~ 63 (289)
T 3ejj_X 3 PAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPYW--------------TLDP-ESPGSTLTTRNATFKNT 63 (289)
T ss_dssp -CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSSS--------------EECC-CSSCCEEEESSCCGGGC
T ss_pred CCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCceE--------------EEec-cCCccEEEEeeeccccC
Confidence 3566666778899999999999999977 499997542210 0111 11123799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCc-eEEEcCCCceeecCCe-----
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPY-VAWRREDGKAINYNGE----- 172 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~-~~W~~~~~~~~~~~~~----- 172 (314)
|.|+|.+.+. +..+..+.|.|..+|...... +....+.+|+.+.|.|.+.+.+.+. +.|++.++..+.....
T Consensus 64 G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~-~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~ 142 (289)
T 3ejj_X 64 GTYRCTELEDPMAGSTTIHLYVKDPAHSWNLL-AQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSP 142 (289)
T ss_dssp EEEEEECCC-----CEEEEEEECCSSCSEEES-CSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEET
T ss_pred EEEEEEEeccCCcceeEEEEEEeCCCcceecc-cceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECC
Confidence 9999998654 455677788888877643332 4677889999999999999877665 9998755554422211
Q ss_pred ---eC--------------------------------------CCeEEcCCCcceeecCccEEEEEEEee-cCCceeEEe
Q psy15734 173 ---LV--------------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEA-FPASLNYWT 210 (314)
Q Consensus 173 ---~~--------------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p~p~~~W~ 210 (314)
+. +|.+...+....+.+|+++.|.|.+.+ .|.+.+.|+
T Consensus 143 ~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~ 222 (289)
T 3ejj_X 143 WRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILK 222 (289)
T ss_dssp TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEE
T ss_pred CCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEE
Confidence 00 566666666667789999999999999 799999999
Q ss_pred cCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 211 NEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
+++.. +...... ......+...+.|.|.++..+|+|.|+|.|.|..|...+++.|.+...+
T Consensus 223 ~~~~~-~~~~~~~--~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 223 RGDTK-LEIPLNS--DFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp ETTEE-CCCCEEE--EECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred ECCEE-eeccCCc--ccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 97433 3221111 1112223345699999999999999999999999999999999876554
No 30
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=1.4e-28 Score=204.60 Aligned_cols=238 Identities=18% Similarity=0.290 Sum_probs=163.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCce-----EEEEEEcCceeEEEe----eeeeeecCcCEEEEeC----CceeEEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREY-----KVAWVKMITQTILSI----HHKVVTQNKRVSITFN----DHRSWFLH 90 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~-----~v~W~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~L~ 90 (314)
++..|..+.+..|++++|.|.+.+.+.+ .+.|+|++....... ....+....++.+... ...+++|.
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 4556778889999999999999765443 599999653211110 0111233345444322 11335799
Q ss_pred EeeecCCCCeEEEEEEecC--CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCcee
Q psy15734 91 LRDVQETDRGWYMCQINTV--PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAI 167 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~--~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~ 167 (314)
|.+++.+|+|.|+|.+.+. +.....+.|.+..+|.+.... ....+..++.+.+.|.+. +.|.+.+.|++ ++..+
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~--~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~-~~~~~ 159 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEV--QKVQLTGEPVPMARCVSTGGRPPAQITWHS-DLGGM 159 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEE--CCBCCCSSCEEEEEEEEEEEBSCCEEEEEE-TTCCE
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecc--cceEeecCceEEEEEEccCccCCcEEEeec-CCccc
Confidence 9999999999999998543 333445566667777765543 334466788889999875 67999999998 44433
Q ss_pred ecC--------C-------------------eeC----------------------CCeEEcC-CCcceeecCccEEEEE
Q psy15734 168 NYN--------G-------------------ELV----------------------PPMLTIP-NQLEGAFVSQTVELHC 197 (314)
Q Consensus 168 ~~~--------~-------------------~~~----------------------~p~~~~~-~~~~~v~~g~~~~l~C 197 (314)
... + .+. +|.+.+. .....+..|+++.|.|
T Consensus 160 ~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C 239 (313)
T 4fqp_A 160 PNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTC 239 (313)
T ss_dssp EEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEE
T ss_pred cccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEE
Confidence 211 0 000 4555443 3444566789999999
Q ss_pred EEeecCCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCC
Q psy15734 198 HTEAFPAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 198 ~~~g~p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 275 (314)
.+.|+|.| .+.|+++++.+. .. ....+. +|.|.++..+|+|.|+|.|.|..|....++.|.|...|+
T Consensus 240 ~~~g~P~p~~v~W~~~~~~l~-~~-----~~~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 240 DARSNPEPTGYNWSTTMGPLP-PF-----AVAQGA-----QLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp EEEEESCCCEEEEEETTBSCC-TT-----EEEETT-----EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred EecCCCCCcEEEEEECCEECC-Cc-----eEEeCC-----EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 99999999 599999865432 11 112333 899999999999999999999999999999999987754
No 31
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=217.82 Aligned_cols=243 Identities=14% Similarity=0.093 Sum_probs=165.3
Q ss_pred ceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecC
Q psy15734 30 NVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTV 109 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (314)
......|+.+.|.|.+.|.|.+.+.|++++.. +.. ....... ........++..|+|.|+|.+.|.
T Consensus 148 p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~-~~~-----~~~~~~~--------~~~~~~~~~~~~d~G~Y~C~A~N~ 213 (527)
T 3qs9_E 148 PYFRKMENQDALVCISESVPEPIVEWVLCDSQ-GES-----CKEESPA--------VVKKEEKVLHELFGTDIRCCARNE 213 (527)
T ss_dssp EEEEECSSSSCEEEEEEESSCCEEEEEEC---------------------------CEEECCSEECCCCSSCEEEEEECS
T ss_pred CcEEecCCceEEEEEEceecCCeEEEEECCCC-Ccc-----ccccCCc--------EEEEeeeeccccCCEEEEEEEEeC
Confidence 34456688899999999999999999995532 110 0000000 012233445689999999999876
Q ss_pred CCcce--eEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCC---------------
Q psy15734 110 PMTSQ--KGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNG--------------- 171 (314)
Q Consensus 110 ~~~~~--~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~--------------- 171 (314)
..... .+.|.|..+|.+ .+....+.+|+.+.|.|.+. +.|.|.+.|++ ++..+....
T Consensus 214 ~G~~~~~~~~l~V~~~p~~----~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~ 288 (527)
T 3qs9_E 214 LGRECTRLFTIDLNQTPQT----TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEEGNYFEMSTYSTNRTMIR 288 (527)
T ss_dssp SCEEEEECEEEESSSCCCC----SCCEEEECTTSCEEEEEEEEESSSCCCEEEEC-SSSCCCGGGEEEEEEEETTTEEEE
T ss_pred CCcccceEEEEEEeccCcc----CCCceEEeCCCeEEEEEEEccCCCCeEEEEEE-CCEECCCCceeeeeeeccCcceee
Confidence 43322 256777666655 24577889999999999997 88999999999 554432210
Q ss_pred --eeC------------------------------CCeEEcCC--CcceeecCccEEEEEEEeecCCceeEEecCCCeee
Q psy15734 172 --ELV------------------------------PPMLTIPN--QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMI 217 (314)
Q Consensus 172 --~~~------------------------------~p~~~~~~--~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~ 217 (314)
.+. +|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|++++ ..+
T Consensus 289 ~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g-~~l 367 (527)
T 3qs9_E 289 ILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR-KSF 367 (527)
T ss_dssp EEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETT-EEE
T ss_pred EEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECC-EEC
Confidence 000 45554433 3456788999999999999999999999974 444
Q ss_pred ecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEee
Q psy15734 218 ITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASN 297 (314)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~ 297 (314)
.....+. ..+. .|.|.++..+|+|.|+|.|.|..|.....+.|.|..+| .+.... ..+.+.|.|.+
T Consensus 368 ~~~~~~~---~~~~-----~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P--~i~~~~----~~~~l~C~a~g 433 (527)
T 3qs9_E 368 PCEQKGL---DNGY-----SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKP--QVLAEA----SASQASCFSDG 433 (527)
T ss_dssp ECBCCBC---SSSS-----EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCC--EEEECC----CCE---EEEEC
T ss_pred cCCcccc---cCCc-----EEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCC--eEEEeC----CCCEEEEEEEE
Confidence 3333221 1233 89999999999999999999999999999998888664 332221 24579999999
Q ss_pred ccCCCccce
Q psy15734 298 GVVPSVSHR 306 (314)
Q Consensus 298 ~~~~~~~w~ 306 (314)
.|.|.+.|.
T Consensus 434 ~P~p~i~W~ 442 (527)
T 3qs9_E 434 YPLPSWTWK 442 (527)
T ss_dssp SSCCEEEEE
T ss_pred EcCCeEEEE
Confidence 999999995
No 32
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.96 E-value=2.2e-28 Score=204.89 Aligned_cols=244 Identities=21% Similarity=0.352 Sum_probs=167.9
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCC----CceEEEEEEcCceeE--EEeee------eeeecCcCEEEEeCCceeEE
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENL----REYKVAWVKMITQTI--LSIHH------KVVTQNKRVSITFNDHRSWF 88 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~----~~~~v~W~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~ 88 (314)
++.++..+..+.+.+|+++.|.|.+.+. +.+.+.|++++.... ..... .......|+.+.......++
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3445566788999999999999999775 556899999532111 11100 00122456665533334457
Q ss_pred EEEeeecCCCCeEEEEEEe-c-CCCcceeEEEEEEeCCceeeecCcceeEEecC---ceEEEEEE-ecccCCCceEEEcC
Q psy15734 89 LHLRDVQETDRGWYMCQIN-T-VPMTSQKGYLQVVVPPRILLDRTSTDVVVREG---TEVTLECS-AVGYPEPYVAWRRE 162 (314)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~-~-~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g---~~~~l~C~-~~~~p~p~~~W~~~ 162 (314)
|.|.+++.+|+|.|+|.+. + .+.....+.|.|..+|.+.....+....+.+| +.+.|.|. +.+.|.|.+.|++.
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 9999999999999999953 3 24456667888988888765544566778888 78999997 78899999999983
Q ss_pred CCcee-e-----cCC-------------------eeC--------------------CCeEEc-CCCcceeecCccEEEE
Q psy15734 163 DGKAI-N-----YNG-------------------ELV--------------------PPMLTI-PNQLEGAFVSQTVELH 196 (314)
Q Consensus 163 ~~~~~-~-----~~~-------------------~~~--------------------~p~~~~-~~~~~~v~~g~~~~l~ 196 (314)
..... . .++ .+. +|.+.+ +.....+.+|+++.|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~ 253 (331)
T 3u83_A 174 LKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLT 253 (331)
T ss_dssp SCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEE
T ss_pred CCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEE
Confidence 11110 0 011 000 455543 4455568899999999
Q ss_pred EEEeecCCce-eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEe-ecCCCCCeEEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 197 CHTEAFPASL-NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIR-SILSHQFGSYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 197 C~~~g~p~p~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
|.+.|.|.|. +.|+++++.+. .. ....++ +|.|. ++..+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 254 C~~~g~p~p~~i~W~~~~~~~~-~~-----~~~~~~-----~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 254 CKADANPPATEYHWTTLNGSLP-KG-----VEAQNR-----TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp EEEEEESCCCEEEEEETTBSCC-TT-----EEEETT-----EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred EeCcCCCCCCEEEEEECCCccc-cc-----ceecCc-----EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 9999999998 99999755432 11 112333 89999 999999999999999999999999999887765
Q ss_pred C
Q psy15734 275 G 275 (314)
Q Consensus 275 ~ 275 (314)
.
T Consensus 323 ~ 323 (331)
T 3u83_A 323 A 323 (331)
T ss_dssp -
T ss_pred h
Confidence 3
No 33
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.96 E-value=9.8e-28 Score=208.58 Aligned_cols=278 Identities=15% Similarity=0.177 Sum_probs=177.7
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCCc----eEEEEEEcC-ceeEE--Eeee--eeeecCcCEEEEeCCceeEEEEEee
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLRE----YKVAWVKMI-TQTIL--SIHH--KVVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~----~~v~W~~~~-~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
.+...+..+.+.+|+++.|.|.+.+.+. +.+.|++++ +..+. .... .......|+.+...+ ..+.|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~ 81 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSR-TDFTLTIDP 81 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEET-TEEEEEESS
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccC-CcEEEEeCC
Confidence 3556678899999999999999988765 489999964 22111 1000 001123566655422 335899999
Q ss_pred ecCCCCeEEEEEEecCCC--cceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEcCCCce
Q psy15734 94 VQETDRGWYMCQINTVPM--TSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRREDGKA 166 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~~~~~~ 166 (314)
++.+|+|.|+|.+.+... ......|.|.. +|.+.... ......+|+.+.|.|.+.+ .|.+ .+.|++ ++..
T Consensus 82 v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~--~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~ 158 (438)
T 1qgc_4 82 VEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSE 158 (438)
T ss_dssp CCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-TTEE
T ss_pred CcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecC--CChhhccCCceEEEEEEccccCCCcEEEEEE-CCEE
Confidence 999999999999976532 23345666653 45554432 1112346889999999987 5777 899999 6665
Q ss_pred eecC------------Ce------eC---------------------------------CCeEEcCCCcceeecCccEEE
Q psy15734 167 INYN------------GE------LV---------------------------------PPMLTIPNQLEGAFVSQTVEL 195 (314)
Q Consensus 167 ~~~~------------~~------~~---------------------------------~p~~~~~~~~~~v~~g~~~~l 195 (314)
+... +. +. ++.....+....+.+|+++.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L 238 (438)
T 1qgc_4 159 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKL 238 (438)
T ss_dssp ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEE
T ss_pred cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEE
Confidence 5433 10 00 112222345567889999999
Q ss_pred EEEEeecC--CceeEEecCC-Ceeee-----------------cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 196 HCHTEAFP--ASLNYWTNEK-GDMII-----------------TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 196 ~C~~~g~p--~p~~~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
.|.+.|.| .+.+.|++++ +..+. ...++.+..... .....|.|.+++.+|+|.|+|.|
T Consensus 239 ~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a 316 (438)
T 1qgc_4 239 SCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNA--KNTLYLQMSSLRSADTAMYYCVR 316 (438)
T ss_dssp EEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETT--TTEEEEEECSCCGGGCCEEEEEE
T ss_pred EEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecC--CCeEEEEECCCChhhCEEEEEEE
Confidence 99999998 6799999862 21111 122333322211 12348999999999999999999
Q ss_pred eeCCC-----CceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 256 VNALG-----ETDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 256 ~n~~g-----~~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
.|..+ .......|.|...+ .+.+.... +..++...+.|.+.+. |.| .+.|.
T Consensus 317 ~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 380 (438)
T 1qgc_4 317 REDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWN 380 (438)
T ss_dssp CCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEG
T ss_pred EccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEe
Confidence 99544 22344566666422 22232221 2344555799999997 767 88884
No 34
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.96 E-value=7.1e-27 Score=210.49 Aligned_cols=249 Identities=15% Similarity=0.213 Sum_probs=167.0
Q ss_pred eeeeeccCCCCCceecCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEe-ee---eeeecCcCEEEEeCCc-
Q psy15734 11 YFKTKCEKPDMPRFAEPVANVTATVGKEALMACVVENL-REYKVAWVKMITQTILSI-HH---KVVTQNKRVSITFNDH- 84 (314)
Q Consensus 11 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~- 84 (314)
.....+.+..+|.+...+..+.+.+|+++.|.|.+.+. +.+.+.|++++....... .. .......++.+..++.
T Consensus 102 ~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 181 (585)
T 2ocw_A 102 SFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTG 181 (585)
T ss_pred eEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCC
Confidence 44455566778899888999999999999999999864 457899999764322110 00 0001134555554332
Q ss_pred -eeEEEEEeeecCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCC---CceEE
Q psy15734 85 -RSWFLHLRDVQETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE---PYVAW 159 (314)
Q Consensus 85 -~~~~L~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---p~~~W 159 (314)
..+.|.|.+++.+|+|.|+|.+.+. +.....+.|.|..++ +....+.+|+.+.|.|.+ +.+. +.+.|
T Consensus 182 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-------p~~~~~~~G~~v~l~C~~-~~~~~~~~~~~w 253 (585)
T 2ocw_A 182 QLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-------PELVYEDLRGSVTFHCAL-GPEVANVAKFLC 253 (585)
T ss_pred CcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC-------CceeEEcCCCcEEEEEEc-CCCCCCceEEEE
Confidence 2347999999999999999999764 445566777776643 234457789999999997 4443 67888
Q ss_pred E-cCCCce---e-e--------------c-----CC--eeC-------------------------------------CC
Q psy15734 160 R-REDGKA---I-N--------------Y-----NG--ELV-------------------------------------PP 176 (314)
Q Consensus 160 ~-~~~~~~---~-~--------------~-----~~--~~~-------------------------------------~p 176 (314)
+ + ++.. + . . ++ .+. +|
T Consensus 254 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p 332 (585)
T 2ocw_A 254 RQS-SGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEES 332 (585)
T ss_pred EeC-CCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEeccc
Confidence 6 5 4410 0 0 0 11 010 44
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCcee----EEec--CCC--eeeec--------CCceeeeEeeCCeeeEEEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLN----YWTN--EKG--DMIIT--------GDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~----~W~~--~~~--~~~~~--------~~~~~~~~~~~~~~~~s~L~i 240 (314)
.+...+....+.+|+++.|.|.+.+.|.|.+ .|++ ++. .+... ..++.+. .+......+|.|
T Consensus 333 ~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~--~~~~~g~~~L~I 410 (585)
T 2ocw_A 333 TIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLL--EEPGNGTFTVIL 410 (585)
T ss_pred ccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEe--ccCCCcEEEEEE
Confidence 4444556677889999999999999999987 7998 543 22211 1122221 111112236999
Q ss_pred eecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 241 RSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.++..+|+|.|+|.| |..|.....+.|.|.
T Consensus 411 ~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~ 440 (585)
T 2ocw_A 411 NQLTSRDAGFYWCLT-NGDTLWRTTVEIKII 440 (585)
T ss_pred CCCChhhCEEEEEcc-cCCCccceeEEEEEe
Confidence 999999999999999 988888888887774
No 35
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.96 E-value=3.9e-28 Score=201.55 Aligned_cols=223 Identities=13% Similarity=0.130 Sum_probs=161.6
Q ss_pred CcceEEEcCCcEEEEEEec-CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 28 VANVTATVGKEALMACVVE-NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
+-.+.+.+|+++.|.|... +.+.+.+.|++++ .. +..+.++.+...+.. ..|.|.+++.+|+|.|+|.+
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~-~~--------i~~~~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~~ 77 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDY-VS--------TEDSPRLEVESKGNK-TKMTFKDLGMDDLGIYSCDV 77 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETT-EE--------CTTCTTEEEEEETTE-EEEEESSCCGGGCEEEEEEE
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECC-EE--------CCCCCCEEEEEeCCE-EEEEECcCCccCCEEEEEEE
Confidence 3467888999999999985 4678999999954 32 233456666554322 38999999999999999999
Q ss_pred ecCCCcceeEEEEEEe------------CCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCCe-
Q psy15734 107 NTVPMTSQKGYLQVVV------------PPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNGE- 172 (314)
Q Consensus 107 ~~~~~~~~~~~l~v~~------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~~- 172 (314)
.+.........+.|.. +|.+.... .....+.+|+.+.|.|.+. +.|.+.+.|++ ++..+.....
T Consensus 78 ~n~~g~~~s~~l~v~~~~~~~~~~~~~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~~~~ 155 (312)
T 2y23_A 78 TDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKS-ELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKY 155 (312)
T ss_dssp SSSCCCCEEEEECHHHHHHHHHHHHHHHSCBCCEEE-EEEEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSSSSC
T ss_pred EeCCCcEEEEEEEEeeeeeeecccccCCCCcccccc-CCceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeCCcE
Confidence 7654444455555542 56554432 2367788999999999999 88999999999 6655543221
Q ss_pred ------------eC----------------------------------------------------CCeEEcCCCcceee
Q psy15734 173 ------------LV----------------------------------------------------PPMLTIPNQLEGAF 188 (314)
Q Consensus 173 ------------~~----------------------------------------------------~p~~~~~~~~~~v~ 188 (314)
+. +|.+..+. ...+.
T Consensus 156 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~v~ 234 (312)
T 2y23_A 156 KMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVT 234 (312)
T ss_dssp EEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEE-EEEEE
T ss_pred EEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecc-eEEEe
Confidence 00 12222211 25788
Q ss_pred cCccEEEEEEEeecCCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEE
Q psy15734 189 VSQTVELHCHTEAFPAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIK 267 (314)
Q Consensus 189 ~g~~~~l~C~~~g~p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 267 (314)
+|+++.|.|.+.+.|+| .+.|+++ +..+....++.+. + ..+.|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 235 ~G~~~~l~C~~~~~p~~~~v~W~~~-g~~~~~~~~~~~~---~---~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 307 (312)
T 2y23_A 235 GECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFK---D---GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307 (312)
T ss_dssp TTTEEEEEEEEESCCSSCEEEEEET-TEEEEEECCC----------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEE
T ss_pred CCCEEEEEEEEcCCCCCCEEEEeeC-CEECCCCCcEEEE---C---CEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeE
Confidence 99999999999999998 9999997 4444434444332 1 1349999999999999999999999999999988
Q ss_pred EEE
Q psy15734 268 VYV 270 (314)
Q Consensus 268 l~V 270 (314)
|.|
T Consensus 308 l~i 310 (312)
T 2y23_A 308 LVD 310 (312)
T ss_dssp ECS
T ss_pred EEe
Confidence 865
No 36
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=2.5e-27 Score=210.59 Aligned_cols=278 Identities=14% Similarity=0.166 Sum_probs=174.5
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCc--eEEEEEEcCceeEEEeeeee---eecCcCEEEEeCCceeEEEEEee
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLRE--YKVAWVKMITQTILSIHHKV---VTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
..+|.+...+....+.+|+++.|.|.+.+.++ +.+.|++++ ..+....... ...++.+... ..|.|.+
T Consensus 112 ~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g-~~l~~~~~~~~~~~~~~~~~~~~------s~L~i~~ 184 (523)
T 2rcj_C 112 KANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADG-SPVKAGVETTKPSKQSNNKYAAS------SYLSLTP 184 (523)
T ss_pred CcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCC-CCCCCceEeccccccCCCCEEEE------EEEEEec
Confidence 35677666666667788999999999988654 499999954 3332111000 0111222211 2699999
Q ss_pred ecCCCCeEEEEEEecCCC-cceeEEEE----EEeCCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCce
Q psy15734 94 VQETDRGWYMCQINTVPM-TSQKGYLQ----VVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKA 166 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~-~~~~~~l~----v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~ 166 (314)
++.+|+|.|+|.+.+... ....+.+. +..+|.+.... ....+.+|+.+.|.|.+.|. |.| .+.|++ ++..
T Consensus 185 ~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~--~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k-~g~~ 261 (523)
T 2rcj_C 185 EQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPQPVTVSWNS-GALT 261 (523)
T ss_pred hhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecC--CCcccccCCceEEEEEEeceeCCCeEEEEec-CCcc
Confidence 999999999999977532 22222222 12345554322 23346789999999999886 878 899999 4433
Q ss_pred ee---------cCC------------------eeC--------------------CCeE-EcCCCcce-eecCccEEEEE
Q psy15734 167 IN---------YNG------------------ELV--------------------PPML-TIPNQLEG-AFVSQTVELHC 197 (314)
Q Consensus 167 ~~---------~~~------------------~~~--------------------~p~~-~~~~~~~~-v~~g~~~~l~C 197 (314)
+. .++ .+. .|.+ ..++.... +.+|+++.|.|
T Consensus 262 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~dG~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C 341 (523)
T 2rcj_C 262 SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTC 341 (523)
T ss_pred cceEeCCcEecCCCcEEEEEEEEechhhcCCceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEE
Confidence 21 111 110 2333 33444343 78899999999
Q ss_pred EEeecCC----ceeEEecCCCeeeecCCceeeeEeeC-CeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE-
Q psy15734 198 HTEAFPA----SLNYWTNEKGDMIITGDDYEDSRLIN-GYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN- 271 (314)
Q Consensus 198 ~~~g~p~----p~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~- 271 (314)
.+.|.|+ +.+.|++++.. +............+ .+...+.|.|.++..+|+|.|+|.|.|..+.......|.+.
T Consensus 342 ~~~g~~p~~~~~~v~W~k~g~~-l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~ 420 (523)
T 2rcj_C 342 VVVDVSHEDPQVKFNWYVDGVQ-VHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAK 420 (523)
T ss_pred EEecccCCCCceEEEEEECCeE-ccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEccc
Confidence 9999754 48999997544 33332222222222 35566789999999999999999999988876555444431
Q ss_pred -ecCCCeeEEEEcc----ccccEeEEEEEeeccCC--CccceE
Q psy15734 272 -LVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHRI 307 (314)
Q Consensus 272 -~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~v 307 (314)
....+.+.+.... ......+.|.|.++++| .+.|..
T Consensus 421 ~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k 463 (523)
T 2rcj_C 421 GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWES 463 (523)
T ss_pred CCCCCCEEEEeCCChHHccCCceEEEEEEEeeECCCCEEEEEE
Confidence 1222333332111 12236799999998777 778853
No 37
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=5.8e-30 Score=214.78 Aligned_cols=237 Identities=19% Similarity=0.282 Sum_probs=102.7
Q ss_pred cCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEE
Q psy15734 26 EPVANVTATVGKEALMACVVENL-REYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMC 104 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (314)
..+..+.+.+|+++.|.|.+.+. +.+.+.|++++. .+. .+.++.+. .+.|.|.+++.+|+|.|+|
T Consensus 13 ~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~-~~~--------~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C 78 (334)
T 1ry7_B 13 GQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGT-GLV--------PSERVLVG-----PQRLQVLNASHEDSGAYSC 78 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCe-eCC--------CcccEEec-----cceEEEeecccccCEEEEE
Confidence 34778899999999999999876 568999999543 221 22333321 2379999999999999999
Q ss_pred EEecCCCcceeEEEEEEeCC----------------------ceeee--cCcceeEEecCceEEEEEEecccCCCceEEE
Q psy15734 105 QINTVPMTSQKGYLQVVVPP----------------------RILLD--RTSTDVVVREGTEVTLECSAVGYPEPYVAWR 160 (314)
Q Consensus 105 ~~~~~~~~~~~~~l~v~~~p----------------------~~~~~--~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~ 160 (314)
.+.+.+.....+.|.|...+ .+... .......+.+|+.+.|.|.+.+.|.+.+.|+
T Consensus 79 ~a~n~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~ 158 (334)
T 1ry7_B 79 RQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWL 158 (334)
T ss_dssp ----------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECC
T ss_pred EEEeCCeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEE
Confidence 99766444555666666433 22111 0122456889999999999999999999999
Q ss_pred cCCCceeecCCe------------eC-------------------------------------CCeEEc-CCCcceeecC
Q psy15734 161 REDGKAINYNGE------------LV-------------------------------------PPMLTI-PNQLEGAFVS 190 (314)
Q Consensus 161 ~~~~~~~~~~~~------------~~-------------------------------------~p~~~~-~~~~~~v~~g 190 (314)
+ ++..+..... +. +|.+.. .+....+.+|
T Consensus 159 ~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G 237 (334)
T 1ry7_B 159 K-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLG 237 (334)
T ss_dssp B-TTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESS
T ss_pred E-CCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCC
Confidence 9 5555432211 00 122222 2355678899
Q ss_pred ccEEEEEEEeecCCceeEEecC---CCeeeecCCceeeeEe-eCC----eeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 191 QTVELHCHTEAFPASLNYWTNE---KGDMIITGDDYEDSRL-ING----YSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 191 ~~~~l~C~~~g~p~p~~~W~~~---~~~~~~~~~~~~~~~~-~~~----~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
+++.|.|.+.|.|.|.+.|+++ ++..+........... ..+ ....+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 238 ~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 317 (334)
T 1ry7_B 238 SDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFS 317 (334)
T ss_dssp CCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCE
T ss_pred CCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeE
Confidence 9999999999999999999994 2333322222111100 000 0012379999999999999999999999999
Q ss_pred eeEEEEEEEecCCCe
Q psy15734 263 DGFIKVYVNLVDGDI 277 (314)
Q Consensus 263 ~~~~~l~V~~~~~~~ 277 (314)
..++.|.|...+.+.
T Consensus 318 ~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 318 HHSAWLVVLPAEEEL 332 (334)
T ss_dssp EEEEEEEEECSCCC-
T ss_pred EEEEEEEEEECCCCc
Confidence 999999998876553
No 38
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.96 E-value=1.9e-27 Score=203.28 Aligned_cols=222 Identities=26% Similarity=0.373 Sum_probs=159.9
Q ss_pred CcceEEEcCCcEEEEEEec-CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 28 VANVTATVGKEALMACVVE-NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
...+.+.+|+.+.|.|... +.+.+.+.|++++.. + ..+.+..+... .+.|.|.+++.+|+|.|+|.+
T Consensus 109 ~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~-~--------~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~a 176 (384)
T 3kld_A 109 RSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYP-S--------YQDNRRFVSQE---TGNLYIAKVEKSDVGNYTCVV 176 (384)
T ss_dssp CCCEEEEETCCEEECCCCCSEESCEEEEEEETTEE-C--------CCSSSEEECTT---TCCEEESSCCGGGCEEEEEEE
T ss_pred CCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCC-C--------EeeccEEEEcC---CCcEEEeecCHHHCceEEEEE
Confidence 4568899999999999764 346689999995432 1 12223222211 236999999999999999999
Q ss_pred ecCCCcce----eEEEEEE-------eCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC----
Q psy15734 107 NTVPMTSQ----KGYLQVV-------VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG---- 171 (314)
Q Consensus 107 ~~~~~~~~----~~~l~v~-------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~---- 171 (314)
.|...... ...+.+. .+|.+... .+....+.+|+.+.|.|.+.|.|.|.+.|++.++..+....
T Consensus 177 ~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~-~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~ 255 (384)
T 3kld_A 177 TNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQ-FPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK 255 (384)
T ss_dssp EETTTTEEEECCCEEEEEEEEEECCCEEEEEEEE-CCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECT
T ss_pred ecccccceeeCCceEEEEccCCcccccCCceeec-CCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecC
Confidence 77532211 1122221 12333222 24566788999999999999999999999986654433211
Q ss_pred ---eeC---------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCe
Q psy15734 172 ---ELV---------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGD 215 (314)
Q Consensus 172 ---~~~---------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~ 215 (314)
.+. +|.+...+....+..|+++.|.|.+.|.|.|.+.|+++ +.
T Consensus 256 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~-g~ 334 (384)
T 3kld_A 256 SNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKN-GD 334 (384)
T ss_dssp TSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEET-TE
T ss_pred CCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEEEEEC-CE
Confidence 110 56666666778899999999999999999999999997 44
Q ss_pred eeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 216 MIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.+....++.+ .++ +|.|.++..+|+|.|+|.|.|..|....+..|.|.
T Consensus 335 ~l~~~~~~~~---~~~-----~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 335 PLLTRDRIQI---EQG-----TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp ECCCBTTEEE---ETT-----EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCCccEEE---eCC-----EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 4444444332 344 99999999999999999999999999999999885
No 39
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.96 E-value=1.3e-27 Score=205.51 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=169.9
Q ss_pred eccCCCCCcee-cCCcceEEEcCCcEEEEEEe-cCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEe
Q psy15734 15 KCEKPDMPRFA-EPVANVTATVGKEALMACVV-ENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLR 92 (314)
Q Consensus 15 ~~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 92 (314)
.+.+...|.+. .......+.+|+++.|.|.+ .+.+.+.+.|++++...+ ..+.++....+ +.|.|.
T Consensus 109 ~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~--------~~~~~~~~~~~----~~l~i~ 176 (404)
T 3p3y_A 109 RLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPI--------TQDKRVSQGHN----GDLYFS 176 (404)
T ss_dssp EEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBC--------CCCSSEEECTT----SCEEES
T ss_pred EEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCcccc--------CCCCcEEEcCC----CcEEEE
Confidence 34444555543 34556889999999999999 677889999999654321 22334443322 269999
Q ss_pred eecCCC-CeEEEEEEecCCCc----ceeEEEEEEeC-------Cceeeec-CcceeEEecCceEEEEEEecccCCCceEE
Q psy15734 93 DVQETD-RGWYMCQINTVPMT----SQKGYLQVVVP-------PRILLDR-TSTDVVVREGTEVTLECSAVGYPEPYVAW 159 (314)
Q Consensus 93 ~~~~~d-~G~Y~C~~~~~~~~----~~~~~l~v~~~-------p~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~W 159 (314)
+++.+| .|.|+|.+.+.... .....+.|... |.+.... .+....+.+|+.+.|.|.+.+.|.+.+.|
T Consensus 177 ~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W 256 (404)
T 3p3y_A 177 NVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAW 256 (404)
T ss_dssp SCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEE
T ss_pred eeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEE
Confidence 999999 59999999765322 22244555532 2222111 12345688999999999999999999999
Q ss_pred EcCCCceeecCCee--------C---------------------------------CCeEEcCCCcceeecCccEEEEEE
Q psy15734 160 RREDGKAINYNGEL--------V---------------------------------PPMLTIPNQLEGAFVSQTVELHCH 198 (314)
Q Consensus 160 ~~~~~~~~~~~~~~--------~---------------------------------~p~~~~~~~~~~v~~g~~~~l~C~ 198 (314)
++ ++..+...... . +|.+...+....+.+|+++.|.|.
T Consensus 257 ~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~ 335 (404)
T 3p3y_A 257 YK-KGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCR 335 (404)
T ss_dssp EE-TTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECE
T ss_pred EE-CCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEE
Confidence 99 56554332211 0 667777777788999999999999
Q ss_pred EeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 199 TEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 199 ~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
+.|.|.|.+.|++++ ..+............++ .|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 336 ~~g~p~p~v~W~~~g-~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 336 ANGNPKPTVQWMVNG-EPLQSAPPNPNREVAGD-----TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEEESCCEEEEEETT-EEGGGSCCCTTEEEETT-----EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ccccCCCceEEEECC-EecCCCCCCceEEecCC-----EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999974 43433322222223344 899999999999999999999999999999888753
No 40
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=4.5e-27 Score=190.26 Aligned_cols=203 Identities=18% Similarity=0.184 Sum_probs=150.6
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCce-EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREY-KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+|.|...+..+.+.+|+++.|.|.+.+.+.+ .+.|++++ ..+. .. ...|.|.+++.+|+
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g-~~~~--------~~-----------~~~l~i~~~~~~d~ 60 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNG-TATQ--------TS-----------TPSYRITSASVNDS 60 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETT-EECS--------CC-----------SSEEEESSCCGGGC
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECC-EEee--------cc-----------CCeEEEecCCcccC
Confidence 4788888888999999999999999887766 99999954 3221 11 12799999999999
Q ss_pred eEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCC---eeC-
Q psy15734 100 GWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNG---ELV- 174 (314)
Q Consensus 100 G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~---~~~- 174 (314)
|.|+|.+.+. ..+..+.|.|..++.... +....+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.... .+.
T Consensus 61 G~Y~C~~~~~-~~s~~~~l~v~~~~~~~~---~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~~~~~~~~l~i 135 (262)
T 3rjd_A 61 GEYRCQRGLS-GRSDPIQLEIHRGWLLLQ---VSSRVFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFKFFHWNSNLTI 135 (262)
T ss_dssp EEEEEEESSS-CCCCCEEEEEECSSEEEE---ESCSEEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEEEEEECCCEEE
T ss_pred eEEEEEEecC-CccccEEEEEeccceEec---CCCeEEecCCeEEEEEEccCCCCCceEEEEE-CCccccccCCCCeEEE
Confidence 9999999653 344567788877664433 234567899999999999 677888999999 666554221 110
Q ss_pred -----------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCC-ce----eEEecCCC
Q psy15734 175 -----------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPA-SL----NYWTNEKG 214 (314)
Q Consensus 175 -----------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~----~~W~~~~~ 214 (314)
+|.+...+ ...+.+|+.+.|.|.+.+.|. |. +.|++++.
T Consensus 136 ~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~ 214 (262)
T 3rjd_A 136 LKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSK 214 (262)
T ss_dssp SSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTE
T ss_pred EECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCc
Confidence 44454444 556889999999999999886 53 57888643
Q ss_pred eeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 215 DMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
.+... ... +.|.|.++..+|+|.|+|.|.|..|..
T Consensus 215 -~~~~~-------~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 215 -TLRGR-------NTS-----SEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp -EEEEE-------ESC-----CEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred -Eeccc-------CCC-----ceEEEEEechhhCeEEEEEEEcccCce
Confidence 33211 111 389999999999999999999999975
No 41
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=3e-28 Score=205.57 Aligned_cols=242 Identities=17% Similarity=0.170 Sum_probs=137.1
Q ss_pred cCCcceEEEcCCcEEEEEEecCCCc-----------eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 26 EPVANVTATVGKEALMACVVENLRE-----------YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~~-----------~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
.+...+.+.+|+++.|.|.+.+.+. +.+.|++++..............+.++.... +.|.|.++
T Consensus 12 ~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~~ 86 (349)
T 4dep_C 12 DTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK-----DVLWFRPT 86 (349)
T ss_dssp CCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEET-----TEEEESSC
T ss_pred ceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecC-----CEEEEccC
Confidence 3466789999999999999987553 8999999653110000000001233443322 27999999
Q ss_pred cCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeec--CcceeEEecCceEEEEEEe-----cccCCCceEEEcCCCce
Q psy15734 95 QETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDR--TSTDVVVREGTEVTLECSA-----VGYPEPYVAWRREDGKA 166 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~--~~~~~~~~~g~~~~l~C~~-----~~~p~p~~~W~~~~~~~ 166 (314)
+.+|+|.|+|.+.+. +.....+.|.|..++...... .+....+.+|+.+.|.|.+ .+.|.|.+.|++ ++..
T Consensus 87 ~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k-~~~~ 165 (349)
T 4dep_C 87 LLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM-GCYK 165 (349)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEE-TTEE
T ss_pred ChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEee-CCEE
Confidence 999999999999765 344556678887766533221 1345578899999999985 678999999999 6655
Q ss_pred eecCC-------eeC-------------------------------------------CCeEEcCCCcc--eeecCccEE
Q psy15734 167 INYNG-------ELV-------------------------------------------PPMLTIPNQLE--GAFVSQTVE 194 (314)
Q Consensus 167 ~~~~~-------~~~-------------------------------------------~p~~~~~~~~~--~v~~g~~~~ 194 (314)
+.... .+. +|.+..+.... .+.+|+++.
T Consensus 166 l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~ 245 (349)
T 4dep_C 166 IQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELL 245 (349)
T ss_dssp CCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------C
T ss_pred CCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEE
Confidence 43211 000 24443333322 778999999
Q ss_pred EEEEEe----ecCCceeEEecCCCeeeecCCceeeeE-----eeCCeeeEEEEEEeecCCCCC-eEEEEEEeeCCCCcee
Q psy15734 195 LHCHTE----AFPASLNYWTNEKGDMIITGDDYEDSR-----LINGYSCHMTLKIRSILSHQF-GSYRCVAVNALGETDG 264 (314)
Q Consensus 195 l~C~~~----g~p~p~~~W~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~L~i~~~~~~d~-G~Y~C~a~n~~g~~~~ 264 (314)
|.|.+. |.|.|.+.|++++..+.....++.... ..++....++|.|.++..+|+ |.|+|.|.|..|....
T Consensus 246 l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 325 (349)
T 4dep_C 246 IPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAK 325 (349)
T ss_dssp CCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEE
T ss_pred EEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEE
Confidence 999999 578999999997554333122222211 012223345799999999999 9999999999999999
Q ss_pred EEEEEEEec
Q psy15734 265 FIKVYVNLV 273 (314)
Q Consensus 265 ~~~l~V~~~ 273 (314)
.+.|.|..+
T Consensus 326 ~~~l~v~~~ 334 (349)
T 4dep_C 326 AAKVKQKVP 334 (349)
T ss_dssp ECC------
T ss_pred EEEEeeecC
Confidence 999988653
No 42
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=9.5e-28 Score=197.41 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=162.4
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+..+.+.+|+++.|.|.+.+. +.|+++... +..+... .....|.|.+++.+|+
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~--------------~~~~~~~-~~~~~L~i~~~~~~d~ 63 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP--------------HWTLYSD-GSSSILSTNNATFQNT 63 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS--------------SCEECCB-TTEEEEEESSCCGGGC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC--------------ceEEecc-CceEEEEEcccccccC
Confidence 46888888889999999999999999873 899964321 1111111 1233799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCC--CceEEEcCCCceeecCCee---
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE--PYVAWRREDGKAINYNGEL--- 173 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~~~W~~~~~~~~~~~~~~--- 173 (314)
|.|+|.+.+. +..+..+.|.|..+|...... +....+.+|+.+.|.|.+.+ |. +.+.|++.++..+......
T Consensus 64 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~-~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~ 141 (292)
T 4dkd_C 64 GTYRCTEPGDPLGGSAAIHLYVKDPARPWNVL-AQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFS 141 (292)
T ss_dssp SCEEECCCC----CCEEECCEECCSSCCEEES-CSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECC
T ss_pred EEEEEEEccCCCCcceEEEEEEcCcccccccc-CCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCccccc
Confidence 9999999654 445677788888877643332 45677899999999999987 44 7899998544443222110
Q ss_pred -----C--------------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCc-eeEE
Q psy15734 174 -----V--------------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPAS-LNYW 209 (314)
Q Consensus 174 -----~--------------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~~~W 209 (314)
. +|.+...+....+.+|+++.|.|.+.+.|++ .+.|
T Consensus 142 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w 221 (292)
T 4dkd_C 142 PWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFL 221 (292)
T ss_dssp SSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEEC
T ss_pred CCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEE
Confidence 0 5566666666677899999999999997764 5667
Q ss_pred ecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 210 TNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
++++..... ... .....+.+...+.|.|.++..+|+|.|+|.|.|..|....++.|.|....
T Consensus 222 ~~~~~~~~~-~~~--~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 222 QHNNTKLAI-PQQ--SDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp CBSSCCCCC-CBE--EEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred eCCCccccc-Ccc--ceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeCC
Confidence 776433221 111 11112223445699999999999999999999999999999999887654
No 43
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.96 E-value=6.5e-28 Score=206.39 Aligned_cols=230 Identities=17% Similarity=0.289 Sum_probs=163.9
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCC---ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEee
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLR---EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
.+..+|.+...+....+.+|+++.|.|.+.+.+ .+.+.|++++...... ....+.++.+..+ +.|.|.+
T Consensus 99 ~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~----~~~~~~~~~~~~~----~~L~i~~ 170 (388)
T 2v5m_A 99 RAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFP----GAEYDGKYLVLPS----GELHIRE 170 (388)
T ss_dssp EEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECS----SSCBTTTEEECTT----SCEEESS
T ss_pred EEccccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCccccc----ccCCCCcEEEccC----CcEEEec
Confidence 334567777777888999999999999997753 3899999965432110 0112345444332 2699999
Q ss_pred ecCCCC-eEEEEEEecCCCcc-----eeEEEEEEeCCc-----eeeecCcceeEEecCceEEEEEEecccCCCceEEEcC
Q psy15734 94 VQETDR-GWYMCQINTVPMTS-----QKGYLQVVVPPR-----ILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRE 162 (314)
Q Consensus 94 ~~~~d~-G~Y~C~~~~~~~~~-----~~~~l~v~~~p~-----~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~ 162 (314)
++.+|+ |.|+|.+.+..... ....|.|..+.. +... ......+.+|+.+.|.|.+.++|.|.+.|++.
T Consensus 171 v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~ 249 (388)
T 2v5m_A 171 VGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPAL-VQKPLELMVAHTISLLCPAQGFPAPSFRWYKF 249 (388)
T ss_dssp CCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSS-CCCCEEEETTSCEEECCCCEEESCCEEEEEEE
T ss_pred CCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccc-cCCceEEeeCCcEEEEEECCCCCCCEEEEEec
Confidence 999999 99999997642111 112466665422 1111 12335678899999999999999999999984
Q ss_pred CCc-----eeec-------CCeeC---------------------------------CCeEEcCCCcceeecCccEEEEE
Q psy15734 163 DGK-----AINY-------NGELV---------------------------------PPMLTIPNQLEGAFVSQTVELHC 197 (314)
Q Consensus 163 ~~~-----~~~~-------~~~~~---------------------------------~p~~~~~~~~~~v~~g~~~~l~C 197 (314)
+.. .+.. .+.+. +|.+...+....+.+|+++.|.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C 329 (388)
T 2v5m_A 250 IEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTC 329 (388)
T ss_dssp CTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEE
T ss_pred CCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEE
Confidence 211 0100 11110 56666667777899999999999
Q ss_pred EEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 198 HTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 198 ~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
.+.|.|.|.+.|++++ ..+... +. .|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 330 ~~~g~p~p~i~W~~~g-~~i~~~---------~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 330 QYTGNPIKTVSWMKDG-KAIGHS---------ES-----VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEEEECCCEEEEEETT-EECSCC---------SS-----EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EeccccCCeEEEEECC-EECccC---------CC-----EEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 9999999999999974 333221 22 9999999999999999999999999999998876
No 44
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.95 E-value=9.1e-27 Score=202.89 Aligned_cols=277 Identities=14% Similarity=0.214 Sum_probs=173.8
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEE---Eeee------eeeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTIL---SIHH------KVVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +..+. .... ......+|+.+..+. ...++|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEEC
Confidence 345667899999999999998753 5789999864 22211 1000 001124577776532 335689999
Q ss_pred eecCCCCeEEEEEEecCCCc----ceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcC
Q psy15734 93 DVQETDRGWYMCQINTVPMT----SQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRRE 162 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~ 162 (314)
+++.+|+|.|.|.+.+.... .....|.|.. +|.+.... + ...+.+|+.+.|.|.+.|. |.| .+.|++.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~ 162 (444)
T 1igt_B 85 RLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLA-P-VCGDTTGSSVTLGCLVKGYFPEPVTLTWNSG 162 (444)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEEC-C-CSSCCCSSCEEEEEEEEEEBSSCCEEEEGGG
T ss_pred CCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEec-c-cccCCCCCcEEEEEEEcceeCCCcEEEEecC
Confidence 99999999999999765321 2335677763 35444332 1 1224789999999999985 777 9999984
Q ss_pred CCceee--------c------------------CCeeC--------------------------------------CCeE
Q psy15734 163 DGKAIN--------Y------------------NGELV--------------------------------------PPML 178 (314)
Q Consensus 163 ~~~~~~--------~------------------~~~~~--------------------------------------~p~~ 178 (314)
+..+. . ++.+. +|.+
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v 241 (444)
T 1igt_B 163 -SLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSV 241 (444)
T ss_dssp -TBCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEE
T ss_pred -CCCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceE
Confidence 33210 0 01000 1222
Q ss_pred -EcCCCcce-eecCccEEEEEEEeecC----CceeEEecCCCeeeecCCceeee-EeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 179 -TIPNQLEG-AFVSQTVELHCHTEAFP----ASLNYWTNEKGDMIITGDDYEDS-RLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 179 -~~~~~~~~-v~~g~~~~l~C~~~g~p----~p~~~W~~~~~~~~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
..++.... +.+|+++.|.|.+.|.| .+.+.|++++.. +......... ...+.+...+.|.|.+++.+|+|.|
T Consensus 242 ~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 320 (444)
T 1igt_B 242 FIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVE-VHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEF 320 (444)
T ss_dssp EEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEE-CSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEE
T ss_pred EecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCcc-ccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcE
Confidence 22333323 57899999999999984 368999997543 3222211111 1222355667999999999999999
Q ss_pred EEEEeeCCCCceeEEEEEE--EecCCCeeEEEEcc----ccccEeEEEEEeeccC-C-Cccce
Q psy15734 252 RCVAVNALGETDGFIKVYV--NLVDGDIFQIRKMS----RLHMGAYLCIASNGVV-P-SVSHR 306 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V--~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~-~-~~~w~ 306 (314)
+|.|.|..|.......+.+ .....+.+.+.... ......+.|.|.++++ + .++|.
T Consensus 321 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 383 (444)
T 1igt_B 321 KCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWT 383 (444)
T ss_dssp EEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEE
Confidence 9999999987743333322 22223444433221 1222579999999544 4 78895
No 45
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=4.5e-29 Score=209.83 Aligned_cols=241 Identities=16% Similarity=0.202 Sum_probs=171.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEec-------CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEE
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVE-------NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~-------~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 91 (314)
...|.|...+..+.+.+|+++.|.|.+. +.+.+.+.|++++...... .....++.... +.|.|
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~-----~~~~~~~~~~~-----~~L~i 85 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVP-----GEEETRMWAQD-----GALWL 85 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCS-----CCSSSCEEEET-----TEEEE
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccC-----ccccccEEeeC-----CeEEE
Confidence 4568888889999999999999999997 7788899999965431110 01123443321 27999
Q ss_pred eeecCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEE-----ecccCCCceEEEcCCCc
Q psy15734 92 RDVQETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECS-----AVGYPEPYVAWRREDGK 165 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~-----~~~~p~p~~~W~~~~~~ 165 (314)
.+++.+|+|.|+|.+.+. +.....+.|.|..++............+.+|+.+.|.|. +.+.|.+.+.|++ ++.
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k-~g~ 164 (339)
T 3o4o_C 86 LPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYK-DSL 164 (339)
T ss_dssp SSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEE-SSC
T ss_pred CCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEec-CCe
Confidence 999999999999999765 344556678887776543111123346889999999999 7888999999999 665
Q ss_pred eeecC----------CeeC------------------------------------------CCeEEcCCCcceeecCccE
Q psy15734 166 AINYN----------GELV------------------------------------------PPMLTIPNQLEGAFVSQTV 193 (314)
Q Consensus 166 ~~~~~----------~~~~------------------------------------------~p~~~~~~~~~~v~~g~~~ 193 (314)
.+... +.+. +|.+..++....+.+|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v 244 (339)
T 3o4o_C 165 LLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRL 244 (339)
T ss_dssp BCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCC
T ss_pred eCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCE
Confidence 55432 0111 4566666677788999999
Q ss_pred EEEEEE---eecC-CceeEEecCCCeee--------ecCCceeeeEeeCCeeeEEEEEEeecCCCCC-eEEEEEEeeCCC
Q psy15734 194 ELHCHT---EAFP-ASLNYWTNEKGDMI--------ITGDDYEDSRLINGYSCHMTLKIRSILSHQF-GSYRCVAVNALG 260 (314)
Q Consensus 194 ~l~C~~---~g~p-~p~~~W~~~~~~~~--------~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~-G~Y~C~a~n~~g 260 (314)
.|.|.+ .|.| .+.+.|++++..+. ....++... ..+.....+.|.|.++..+|+ |.|+|.|.|..|
T Consensus 245 ~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G 323 (339)
T 3o4o_C 245 TIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYS-ENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLS 323 (339)
T ss_dssp CCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECC-CSSSCEEEECCEECSSCCCSCCCCCEEEEEETTE
T ss_pred EEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEec-ccCceEEEEEEEEEEechhhcCccEEEEEEeccC
Confidence 999999 8999 88999999754321 111222111 122233445899999999998 999999999999
Q ss_pred CceeEEEEEEE
Q psy15734 261 ETDGFIKVYVN 271 (314)
Q Consensus 261 ~~~~~~~l~V~ 271 (314)
.+...+.+.+.
T Consensus 324 ~~~~~~~~~~~ 334 (339)
T 3o4o_C 324 FQTLRTTVKEH 334 (339)
T ss_dssp EECCBCCCCC-
T ss_pred ceEEEEEhhHh
Confidence 98887766543
No 46
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.95 E-value=6.5e-28 Score=200.65 Aligned_cols=233 Identities=17% Similarity=0.252 Sum_probs=160.4
Q ss_pred CCcceEEEcCCcEEEEEEecCCC-ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLR-EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQ 105 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 105 (314)
....+.+.+|+++.|.|.+.+.+ .+.+.|++++..... ....+.++.... ..|.|.+++.+|+|.|+|.
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~-----~~~~~~~~~~~~-----~~L~i~~v~~~D~G~Y~C~ 80 (315)
T 1itb_B 11 EKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPV-----STEQASRIHQHK-----EKLWFVPAKVEDSGHYYCV 80 (315)
T ss_dssp CCCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCS-----CCCTTSSSEECS-----SBEECTTCCGGGCSCCEEC
T ss_pred CceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCcc-----ccccCCcEeccC-----CeEEECCCChhhCEEEEEE
Confidence 34478899999999999998876 689999996542111 012234444332 2799999999999999999
Q ss_pred EecC-CCcceeEEEEEEe-CCceeeec-CcceeEEecCceEEEEEEe------cccCCCceEEEcCCCceeecCC-----
Q psy15734 106 INTV-PMTSQKGYLQVVV-PPRILLDR-TSTDVVVREGTEVTLECSA------VGYPEPYVAWRREDGKAINYNG----- 171 (314)
Q Consensus 106 ~~~~-~~~~~~~~l~v~~-~p~~~~~~-~~~~~~~~~g~~~~l~C~~------~~~p~p~~~W~~~~~~~~~~~~----- 171 (314)
+.+. +.....+.+.+.. +|.+...+ ......+..|+.+.|.|.+ .+.|.|.+.|++ ++..+....
T Consensus 81 a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~~~~~~~~~ 159 (315)
T 1itb_B 81 VRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLLLDNIHFSG 159 (315)
T ss_dssp CCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECCCCSSSEEE
T ss_pred EeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECCCccceEee
Confidence 9764 3333333444333 34432211 1123568899999999998 788999999999 666553211
Q ss_pred ---ee------------------------------------------CCCeEEcCCCc-ceeecCccEEEEEEEeecCCc
Q psy15734 172 ---EL------------------------------------------VPPMLTIPNQL-EGAFVSQTVELHCHTEAFPAS 205 (314)
Q Consensus 172 ---~~------------------------------------------~~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p 205 (314)
.+ .+|.+..++.. ..+.+|+++.|.|.+.|.|.|
T Consensus 160 ~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p 239 (315)
T 1itb_B 160 VKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSD 239 (315)
T ss_dssp ETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTS
T ss_pred cCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCC
Confidence 00 04455444443 468899999999999999999
Q ss_pred eeEEecCCCeeeecCCceee---eEeeC-----CeeeEEEEEEeecCCCC-CeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 206 LNYWTNEKGDMIITGDDYED---SRLIN-----GYSCHMTLKIRSILSHQ-FGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 206 ~~~W~~~~~~~~~~~~~~~~---~~~~~-----~~~~~s~L~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.+.|+++ +..+........ ..... .....+.|.|.++..+| +|.|+|.|.|..|....++.|.|.
T Consensus 240 ~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 240 IAYWKWN-GSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEEEEET-TEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred eeEEEEC-CEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 9999996 444433322111 00010 12345699999999999 999999999999999999988764
No 47
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.95 E-value=1.9e-26 Score=178.54 Aligned_cols=189 Identities=21% Similarity=0.302 Sum_probs=128.7
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+. ..+.++.+.........|.|.+++.+|+
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~-~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 74 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQG-KEII-------ADGLKYRIQEFKGGYHQLIIASVTDDDA 74 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETT-EECC-------CCSSSEEEEEETTTEEEEEECSCCGGGC
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECC-EECc-------cCCCcEEEEEcCCCEEEEEECcCCHHhC
Confidence 5789999999999999999999999998888999999954 3221 2234555544333344899999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCceeeec---CcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRILLDR---TSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|.|+|.+.+. +.....+.|.|..+|.+.... .+....+.+|+.+.|.|.+.++|.|.+.|++
T Consensus 75 G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-------------- 140 (197)
T 2j8h_A 75 TVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-------------- 140 (197)
T ss_dssp SEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEE--------------
T ss_pred EEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEE--------------
Confidence 9999999765 333555667776655442211 0122334445555555555555555555554
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEee-cCCCCCeEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRS-ILSHQFGSYRCV 254 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~~d~G~Y~C~ 254 (314)
+ +..+....++.+....+ .+.|.|.+ +..+|+|.|+|.
T Consensus 141 ------------------------------------~-~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~ 179 (197)
T 2j8h_A 141 ------------------------------------G-QDLIDNNGHYQVIVTRS----FTSLVFPNGVERKDAGFYVVC 179 (197)
T ss_dssp ------------------------------------S-SCEECSSSSCEEEECSS----EEEEECTTCCCGGGCEEEEEE
T ss_pred ------------------------------------C-CEEeecCCCEEEEEcCC----ceEEEEeCCCCcccCEeEEEE
Confidence 3 33333333333322111 24899999 999999999999
Q ss_pred EeeCCCCceeEEEEEEE
Q psy15734 255 AVNALGETDGFIKVYVN 271 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~ 271 (314)
|.|..|.....+.|.|.
T Consensus 180 a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 180 AKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEeEEEEEEEe
Confidence 99999999889888875
No 48
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=9.2e-27 Score=203.18 Aligned_cols=224 Identities=16% Similarity=0.126 Sum_probs=138.0
Q ss_pred ccCCCCCcee-cCCcceEEEcCCcEEEEEEecCCCce---EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEE
Q psy15734 16 CEKPDMPRFA-EPVANVTATVGKEALMACVVENLREY---KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 16 ~~~~~~p~~~-~~~~~~~v~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 91 (314)
+.+..+|.+. ..+....+.+|+++.|.|.+.+.+++ .+.|++++ ..+.... . ......+.|.|
T Consensus 80 l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g-~~l~~~~--------~----~~~~~~~~L~i 146 (450)
T 1z7z_I 80 LTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE-KELKREP--------A----VGEPAEVTTTV 146 (450)
T ss_dssp EEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT-EEEEEEE--------C----CTTTEEEEEEE
T ss_pred EEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCC-EEeeccc--------c----cccccceEEEE
Confidence 3333456655 46677889999999999999987776 99999954 4332211 0 00122347999
Q ss_pred eeecCCCCeEEEEEEecCCC-cc--------eeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-C--CCceEE
Q psy15734 92 RDVQETDRGWYMCQINTVPM-TS--------QKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-P--EPYVAW 159 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~-~~--------~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p--~p~~~W 159 (314)
.+++.+|+|.|+|.+.|... .. ....|.|...|...... .....+.+|+.+.|.|.+.+. | .+.+.|
T Consensus 147 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~-~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W 225 (450)
T 1z7z_I 147 LVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQL-VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (450)
T ss_dssp ECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEE-ECCSEEETTSEEEEEEEEESCTTGGGCEEEE
T ss_pred EeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEe-cCceeEEeCCcEEEEEEeeCCCCCCceEEEE
Confidence 99999999999999976422 11 22344444331111000 011568899999999999998 7 689999
Q ss_pred EcCCCceee---------------------cCC--eeC----------------------CCeEEcCCCcceeecCccEE
Q psy15734 160 RREDGKAIN---------------------YNG--ELV----------------------PPMLTIPNQLEGAFVSQTVE 194 (314)
Q Consensus 160 ~~~~~~~~~---------------------~~~--~~~----------------------~p~~~~~~~~~~v~~g~~~~ 194 (314)
++ ++..+. ..+ .+. +|.+... ...+.+|+++.
T Consensus 226 ~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~~--~~~v~~G~~v~ 302 (450)
T 1z7z_I 226 AL-GDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILT--KPEVSEGTEVT 302 (450)
T ss_dssp EE-TTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEES--CSEEETTCEEE
T ss_pred eC-CCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEecC--CeeEeCCCcEE
Confidence 98 443221 111 111 3444433 34788999999
Q ss_pred EEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC-C---ceeEEEEEE
Q psy15734 195 LHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG-E---TDGFIKVYV 270 (314)
Q Consensus 195 l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g-~---~~~~~~l~V 270 (314)
|.|.+. |.|.+.| + +..+.... .. ..|.|.++..+|+|.|+|.|.|..+ . ....+.|.|
T Consensus 303 l~C~~~--p~p~i~W--~-g~~~~~~~-------~~-----~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V 365 (450)
T 1z7z_I 303 VKCEAH--PRAKVTL--N-GVPAQPLG-------PR-----AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRV 365 (450)
T ss_dssp EEEEC---------------------C-------CC-----CCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEE
T ss_pred EEEecC--CCCEeEE--C-CEEcCCCC-------ce-----EEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEE
Confidence 999998 9999999 3 43331111 11 2899999999999999999997665 2 346677777
Q ss_pred Eec
Q psy15734 271 NLV 273 (314)
Q Consensus 271 ~~~ 273 (314)
..+
T Consensus 366 ~~~ 368 (450)
T 1z7z_I 366 LYG 368 (450)
T ss_dssp EEE
T ss_pred ecC
Confidence 543
No 49
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.95 E-value=1.4e-25 Score=201.99 Aligned_cols=276 Identities=16% Similarity=0.173 Sum_probs=180.3
Q ss_pred cCCcceEEEcCCcEEEEEEecCCCc---eEEEEEEcCce----eEEEeee-eeeecCcCEEEEeC-CceeEEEEEeeecC
Q psy15734 26 EPVANVTATVGKEALMACVVENLRE---YKVAWVKMITQ----TILSIHH-KVVTQNKRVSITFN-DHRSWFLHLRDVQE 96 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~~---~~v~W~~~~~~----~~~~~~~-~~~~~~~~~~~~~~-~~~~~~L~i~~~~~ 96 (314)
..|..+.+.+|+++.|.|.+.+.+. ..+.|+|++.. .+..... ......+|+.+... ......|.|.+++.
T Consensus 5 ~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 5 FGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred cCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 4566789999999999999987643 48999996542 1211100 00112346666543 23345799999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CCCceEEEcCCCce--------
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEPYVAWRREDGKA-------- 166 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~~~W~~~~~~~-------- 166 (314)
+|+|.|+|.+.+. +..+..+.|.|..+|.+... +....+.+|+.+.|.|.+.+. |.+.+.|++.++..
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~--~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~ 162 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND--TKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 162 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEecCccccCC--CccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCC
Confidence 9999999999654 45566788889888877543 466778999999999999865 45789999954321
Q ss_pred ------------eecCC------eeC-------------------------CCeEE---cCCCcceeecCccEEEEEEEe
Q psy15734 167 ------------INYNG------ELV-------------------------PPMLT---IPNQLEGAFVSQTVELHCHTE 200 (314)
Q Consensus 167 ------------~~~~~------~~~-------------------------~p~~~---~~~~~~~v~~g~~~~l~C~~~ 200 (314)
+...+ .+. ...+. .++....+.+|+++.|.|.+
T Consensus 163 ~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~~~G~~v~l~C~~- 241 (585)
T 2ocw_A 163 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCAL- 241 (585)
T ss_pred cccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCceeEEcCCCcEEEEEEc-
Confidence 00111 111 11111 23455667899999999998
Q ss_pred ecCC---ceeEEe-cCCC--eeeec---------CCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCce--
Q psy15734 201 AFPA---SLNYWT-NEKG--DMIIT---------GDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETD-- 263 (314)
Q Consensus 201 g~p~---p~~~W~-~~~~--~~~~~---------~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~-- 263 (314)
+.|. +.+.|+ +++. ..+.. ..++.+. .........|.|.++..+|+|.|+|.|.|. |...
T Consensus 242 ~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~ 318 (585)
T 2ocw_A 242 GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN--PQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEG 318 (585)
T ss_pred CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEee--ccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCcccc
Confidence 4444 677886 6542 12222 1122111 110112237999999999999999999995 4443
Q ss_pred ---eEEEEEEEecCCCeeEE--EEccccccEeEEEEEeeccCCCc----cceE
Q psy15734 264 ---GFIKVYVNLVDGDIFQI--RKMSRLHMGAYLCIASNGVVPSV----SHRI 307 (314)
Q Consensus 264 ---~~~~l~V~~~~~~~~~~--~~~~~~~~g~~~C~a~~~~~~~~----~w~v 307 (314)
..+.|.|..++.-.... ..+..++...+.|.+.+.+.|.+ .|..
T Consensus 319 ~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~ 371 (585)
T 2ocw_A 319 SPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEG 371 (585)
T ss_pred CceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEc
Confidence 77888887664322111 22334555679999999999987 6754
No 50
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.95 E-value=1.7e-26 Score=193.31 Aligned_cols=228 Identities=15% Similarity=0.194 Sum_probs=155.4
Q ss_pred eecCCcceEEEcCCcEEEEEEecCC---------CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 24 FAEPVANVTATVGKEALMACVVENL---------REYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~---------~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
...+...+.+.+|+++.|.|.+.+. +.+.+.|++++... .. ..+. . . .+.|.|.++
T Consensus 32 ~~~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~-~~--------~~~~-~-~----~~~L~i~~v 96 (329)
T 3oq3_B 32 MFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTR-RP--------LNRR-V-K----NGDLWIANY 96 (329)
T ss_dssp EEEEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSC-EE--------CSTT-E-E----TTEEEESSC
T ss_pred ccCCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCc-cc--------cCce-e-e----cceEEEcCC
Confidence 3344567789999999999999763 55799999965432 11 1122 1 1 227999999
Q ss_pred cCCCCe-EEEEEEecCC-CcceeEEEEE-EeCCceeeecCcceeEEecCceEEEEEEecccC-CCceEEEcCCCceeecC
Q psy15734 95 QETDRG-WYMCQINTVP-MTSQKGYLQV-VVPPRILLDRTSTDVVVREGTEVTLECSAVGYP-EPYVAWRREDGKAINYN 170 (314)
Q Consensus 95 ~~~d~G-~Y~C~~~~~~-~~~~~~~l~v-~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~~~W~~~~~~~~~~~ 170 (314)
+.+|+| .|+|.+.+.. .......+.+ ..+|.+.... ....+.+|+.+.|.|.+.+.| .|.+.|++ ++..+...
T Consensus 97 ~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~--~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~l~~~ 173 (329)
T 3oq3_B 97 TSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPET--YELGTHDKYGIDLYCGILYAKHYNNITWYK-NNQELIID 173 (329)
T ss_dssp CGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEE--EETTSSTTTCEEEECCCCSCCCCCEEEEEE-TTEECCCS
T ss_pred ChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccc--cceEEeCCCcEEEEeccCCCCCCceEEEEE-CCccCCCC
Confidence 999999 9999998754 3222222233 3345433321 223356799999999999999 89999999 55554211
Q ss_pred --------CeeC---------------------------------------CC----eEEcCCCcceeecCccEEEEEEE
Q psy15734 171 --------GELV---------------------------------------PP----MLTIPNQLEGAFVSQTVELHCHT 199 (314)
Q Consensus 171 --------~~~~---------------------------------------~p----~~~~~~~~~~v~~g~~~~l~C~~ 199 (314)
+.+. +| .+. .+....+.+|+++.|.|.+
T Consensus 174 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~ 252 (329)
T 3oq3_B 174 GTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTA 252 (329)
T ss_dssp SSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEE
T ss_pred CceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEE
Confidence 0000 11 111 3445678899999999999
Q ss_pred eecC---Cc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe-EEEEEEeeCCCCceeEEEEEE
Q psy15734 200 EAFP---AS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG-SYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 200 ~g~p---~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 270 (314)
.|.| .| .+.|++++..+..............+....+.|.|.++..+|+| .|+|.|.|..|....++.|.|
T Consensus 253 ~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 253 VSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred EECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 9998 77 88999986553333332221111111124569999999999999 999999999999988888766
No 51
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.95 E-value=2.1e-26 Score=196.69 Aligned_cols=224 Identities=21% Similarity=0.312 Sum_probs=161.2
Q ss_pred CCcceEEEcCCcEEEEEEec-CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVE-NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQ 105 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 105 (314)
.+..+.+.+|+++.|.|.+. +.+.+.+.|++++.... ...+.+...... .+.|.|.+++.+|+|.|+|.
T Consensus 107 ~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~-------~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~ 176 (382)
T 1cs6_A 107 ERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNF-------IPADGRRFVSQT---TGNLYIAKTEASDLGNYSCF 176 (382)
T ss_dssp CCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCB-------CCCCSSEEECTT---TCCEEESSCCGGGCEEEEEE
T ss_pred CCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccc-------cccCceEEEecC---ceEEEEEeeCcccCeeEEEE
Confidence 35678899999999999964 45778999999653311 112233322211 13699999999999999999
Q ss_pred EecCC-Cc-----ceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec----
Q psy15734 106 INTVP-MT-----SQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY---- 169 (314)
Q Consensus 106 ~~~~~-~~-----~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~---- 169 (314)
+.+.. .. +....|.+.. +|.+... .+....+.+|+.+.|.|.+.+.|.|.+.|++.+ ..+..
T Consensus 177 ~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~-~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~-~~~~~~~~~ 254 (382)
T 1cs6_A 177 ATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAK-FPADTYALTGQMVTLECFAFGNPVPQIKWRKLD-GSQTSKWLS 254 (382)
T ss_dssp EEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEEC-CCSEEEEETTCCEEEECEEEEESCCEEEEEECC-SCCSCCCSB
T ss_pred EEEccccccceeEccceeeccchhhcccCCCceecc-CCCceEEeCCCeEEEEEEEccCCCCEEEEEECC-cccccEEec
Confidence 96542 11 1223444432 2333332 245677889999999999999999999999843 33321
Q ss_pred -CCeeC---------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCe
Q psy15734 170 -NGELV---------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGD 215 (314)
Q Consensus 170 -~~~~~---------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~ 215 (314)
...+. +|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++ +.
T Consensus 255 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~-g~ 333 (382)
T 1cs6_A 255 SEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD-GQ 333 (382)
T ss_dssp SSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEET-TE
T ss_pred CCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEEC-CE
Confidence 11110 66666667777899999999999999999999999997 44
Q ss_pred eeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 216 MIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.+....++.+ .++ .|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 334 ~~~~~~~~~~---~~~-----~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 334 PLASQNRIEV---SGG-----ELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp ECCCCSSEEE---ETT-----EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ECCCCceEEE---ECC-----EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 4444444332 234 89999999999999999999999999999998885
No 52
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=7.3e-26 Score=197.49 Aligned_cols=248 Identities=17% Similarity=0.147 Sum_probs=168.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEE-----EEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKV-----AWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
|...|....+.+|+++.|.|.+.+ +.+.+ .|+|++.. ..+.+. ..|.|.+++. |
T Consensus 2 i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~----------~~~~~~---------~~l~i~~v~~-d 60 (450)
T 1z7z_I 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELL----------LPGNNR---------KVYELSNVQE-D 60 (450)
T ss_dssp CEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECC----------SSTTTE---------EEEEEEEECS-C
T ss_pred cccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceE----------ecCCCc---------eEEEEEeccc-C
Confidence 345667889999999999999998 77787 89885321 112221 2699999987 9
Q ss_pred CeEEEEEEecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC---ceEEEcCCCceeecCC---
Q psy15734 99 RGWYMCQINTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP---YVAWRREDGKAINYNG--- 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p---~~~W~~~~~~~~~~~~--- 171 (314)
+| |+|.+.+.+ ..+..+.|.|..+|.+.... +....+.+|+.+.|.|.+.+.|++ .+.|++ ++..+....
T Consensus 61 ~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~~~~~~~ 137 (450)
T 1z7z_I 61 SQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELA-PLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELKREPAVG 137 (450)
T ss_dssp BC-CEEEEEETTEEEEEECEEEEEBCCSEEEEC-CCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEEEEECCT
T ss_pred Ce-eEEEEeCCCCcceeEEEEEEEeCCCcceec-CCCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEeecccccc
Confidence 99 999997543 34556788888888776443 345678899999999999998887 899999 666554221
Q ss_pred -----eeC---------------------------------CCeEE------cCCCc---ceeecCccEEEEEEEeec-C
Q psy15734 172 -----ELV---------------------------------PPMLT------IPNQL---EGAFVSQTVELHCHTEAF-P 203 (314)
Q Consensus 172 -----~~~---------------------------------~p~~~------~~~~~---~~v~~g~~~~l~C~~~g~-p 203 (314)
.+. +..+. .++.. ..+.+|+.+.|.|.+.|. |
T Consensus 138 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P 217 (450)
T 1z7z_I 138 EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFP 217 (450)
T ss_dssp TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTT
T ss_pred cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCC
Confidence 000 01111 11222 567899999999999998 7
Q ss_pred --CceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe--EEEEEEeeCCCCceeEEEEEEEecCCCeeE
Q psy15734 204 --ASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG--SYRCVAVNALGETDGFIKVYVNLVDGDIFQ 279 (314)
Q Consensus 204 --~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~ 279 (314)
.+.+.|++++..+.. + .....+. ....+.+ ++..+|+| .|+|.|.|..|.....+.|.|...+.+.+.
T Consensus 218 ~~~~~~~W~~~~~~~~~---~--~~~~~~~--~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~ 289 (450)
T 1z7z_I 218 VSEAQVHLALGDQRLNP---T--VTYGNDS--FSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVI 289 (450)
T ss_dssp GGGCEEEEEETTEECCC---E--EEEETTE--EEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEE
T ss_pred CCceEEEEeCCCEeCCc---e--EEecCCc--eeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEe
Confidence 789999997543221 1 2222221 1112223 78999999 999999999999988999999987666665
Q ss_pred EE--EccccccEeEEEEEeeccCCCccc
Q psy15734 280 IR--KMSRLHMGAYLCIASNGVVPSVSH 305 (314)
Q Consensus 280 ~~--~~~~~~~g~~~C~a~~~~~~~~~w 305 (314)
.. .+..++...+.|.+. +.|.++|
T Consensus 290 ~~~~~v~~G~~v~l~C~~~--p~p~i~W 315 (450)
T 1z7z_I 290 LTKPEVSEGTEVTVKCEAH--PRAKVTL 315 (450)
T ss_dssp ESCSEEETTCEEEEEEEC----------
T ss_pred cCCeeEeCCCcEEEEEecC--CCCEeEE
Confidence 43 233445567999998 7889999
No 53
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=174.21 Aligned_cols=189 Identities=15% Similarity=0.311 Sum_probs=131.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ....++.+..++. ...|.|.+++.+|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~-~~~--------~~~~~~~~~~~~~-~~~L~i~~~~~~d 74 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFG-KEL--------IQSRKYKMSSDGR-THTLTVMTEEQED 74 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETT-EEE--------CCCSSEEEEESSS-EEEEEEECCSGGG
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECC-EEC--------CCCccEEEEeCCC-EEEEEEecCCccC
Confidence 45688888899999999999999999988888899999954 322 2344555544432 3479999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeee-cCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLD-RTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p 176 (314)
+|.|+|.+.+. +.......|.|..+|.+... ..+....+..|+.+.|.|.+.++|.|.+.|++ ++
T Consensus 75 ~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~------------ 141 (197)
T 3lcy_A 75 EGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQ------------ 141 (197)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEE-TT------------
T ss_pred CEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeE-CC------------
Confidence 99999999764 44455566777665554321 11234455666667777766666666666666 32
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCC-CCCeEEEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILS-HQFGSYRCVA 255 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a 255 (314)
..+....++.+..... .+.|.|.++.. +|+|.|+|.|
T Consensus 142 --------------------------------------~~~~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y~C~a 179 (197)
T 3lcy_A 142 --------------------------------------KLLQNSENITIENTEH----YTHLVMKNVQRKTHAGKYKVQL 179 (197)
T ss_dssp --------------------------------------EECCCCSSEEEEECSS----EEEEEESSCCHHHHCEEEEEEE
T ss_pred --------------------------------------EECCCCCceEEEEcCC----EEEEEEccccchhhCceEEEEE
Confidence 2222222222221111 14899999995 8999999999
Q ss_pred eeCCCCceeEEEEEEEe
Q psy15734 256 VNALGETDGFIKVYVNL 272 (314)
Q Consensus 256 ~n~~g~~~~~~~l~V~~ 272 (314)
.|..|.....+.|.|..
T Consensus 180 ~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 180 SNVFGTVDAILDVEIQD 196 (197)
T ss_dssp ECSSCEEEEEEEEEEEC
T ss_pred EcCcCceEEEEEEEEec
Confidence 99999999999888864
No 54
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=1e-25 Score=173.98 Aligned_cols=186 Identities=24% Similarity=0.380 Sum_probs=126.0
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|..++..+.+.+|+++.|.|.+.+.+.+.+.|++++.. +.. ....++.+...+ ....|.|.+++.+|+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~~------~~~~~~~~~~~~-~~~~L~i~~~~~~d~ 75 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQV-IST------STLPGVQISFSD-GRAKLTIPAVTKANS 75 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSB-CCT------TTSTTCEEEEET-TEEEEEESSCCGGGC
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEE-ccc------ccCCceEEEeCC-CEEEEEECCCCcccC
Confidence 468888889999999999999999998888889999995432 211 111233333322 234799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|.|+|.+.+. +.......|.|.. +|.+... +....+..|+.+.|.|.+.++|.|.+.|++ ++
T Consensus 76 G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~----------- 141 (194)
T 2a38_A 76 GRYSLKATNGSGQATSTAELLVKAETAPPNFVQR--LQSMTVRQGSQVRLQVRVTGIPTPVVKFYR-DG----------- 141 (194)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCEEEEEEEC--CCCEEECTTEEEEEEEEEEEESCCEEEEEE-TT-----------
T ss_pred EEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeC--CccEEEcCCCEEEEEEEEEEecCCeEEEEE-CC-----------
Confidence 9999999765 3334445666663 3333322 234455666666666666666666666666 32
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
..+....++.+..... .++|.|.++..+|+|.|+|.|
T Consensus 142 ---------------------------------------~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a 178 (194)
T 2a38_A 142 ---------------------------------------AEIQSSLDFQISQEGD----LYSLLIAEAYPEDSGTYSVNA 178 (194)
T ss_dssp ---------------------------------------EECCCSSSEEEEEETT----EEEEEEEEECGGGCEEEEEEE
T ss_pred ---------------------------------------EECCCCCcEEEEEcCC----EEEEEECCCChhcCeEEEEEE
Confidence 2222233333221111 238999999999999999999
Q ss_pred eeCCCCceeEEEEEE
Q psy15734 256 VNALGETDGFIKVYV 270 (314)
Q Consensus 256 ~n~~g~~~~~~~l~V 270 (314)
.|..|.....+.|.|
T Consensus 179 ~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 179 TNSVGRATSTAELLV 193 (194)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred EeCCCceEEEEEEEE
Confidence 999999988888877
No 55
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.94 E-value=3e-25 Score=173.96 Aligned_cols=195 Identities=20% Similarity=0.286 Sum_probs=129.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC-C
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE-T 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~ 97 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ .....++.+.........|.|.+++. +
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~-~~~-------~~~~~~~~~~~~~~~~~~L~i~~v~~~~ 75 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNG-KKV-------SGTQSRYTVLEQPGGISILRIEPVRAGR 75 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETT-EEC-------CTTSTTEEEEEETTTEEEEEESSCCTTT
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECC-EEC-------CCCcceeEEEEcCCCeEEEEEEecCCCC
Confidence 46799999999999999999999999998888899999954 322 12345666554433445899999999 9
Q ss_pred CCeEEEEEEecCC-C-cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 98 DRGWYMCQINTVP-M-TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 98 d~G~Y~C~~~~~~-~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|+|.|+|.+.+.. . .+..+.|.|..++.... .+
T Consensus 76 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~---------------------------------------------~~ 110 (212)
T 2yd1_A 76 DDAPYECVAENGVGDAVSADATLTIYEGDKTPA---------------------------------------------GF 110 (212)
T ss_dssp TCSEEEEEEECSSSCEEEEEEEEEEECTTCSCT---------------------------------------------TC
T ss_pred cCceEEEEEEeCCCCeEEeeEEEEEecccCCCC---------------------------------------------CC
Confidence 9999999997653 3 35556677765421100 00
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+.....++. ..++ .|.|.++..+|+|.|+|.|
T Consensus 111 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~---~~~~-----~L~i~~v~~~d~G~Y~C~a 182 (212)
T 2yd1_A 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS---LKDG-----FLQIENSREEDQGKYECVA 182 (212)
T ss_dssp CEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEE---EETT-----EEEECSCCGGGCEEEEEEE
T ss_pred CeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEE---ccCC-----eEEEccCChhhCEEEEEEe
Confidence 1111112222344555555555555555555555554332222222221 2334 9999999999999999999
Q ss_pred eeCCCCceeE-EEEEEEecC
Q psy15734 256 VNALGETDGF-IKVYVNLVD 274 (314)
Q Consensus 256 ~n~~g~~~~~-~~l~V~~~~ 274 (314)
.|..|..... +.|.|....
T Consensus 183 ~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 183 ENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EETTEEEECCCEEEEEEC--
T ss_pred ecCCCceeEEEEEEEEEecc
Confidence 9999988654 788887664
No 56
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.94 E-value=4.1e-26 Score=199.48 Aligned_cols=276 Identities=15% Similarity=0.196 Sum_probs=166.7
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ce---eEEEeee------eeeecCcCEEEEeCC-ceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQ---TILSIHH------KVVTQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. +. .+..... ......+|+.+..+. ...+.|.|.+
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRS 85 (457)
T ss_dssp ECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECC
Confidence 45568899999999999998765 6789999853 21 1111100 001124577776542 3456899999
Q ss_pred ecCCCCeEEEEEEecCCC-------------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CC-
Q psy15734 94 VQETDRGWYMCQINTVPM-------------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PE- 154 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~-------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~- 154 (314)
++.+|+|.|+|.+.+... ......|.|.. +|.+.... ....+.+|+.+.|.|.+.+. |.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~ 163 (457)
T 1hzh_H 86 LRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEP 163 (457)
T ss_dssp CCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEEC--CCSCCCTTCCEEEEEEEESBBSCC
T ss_pred CCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecC--ccccccCCCcEEEEEEEeEEeCCC
Confidence 999999999999976532 22345677765 45554432 22235789999999999987 65
Q ss_pred CceEEEcCCCcee---------ecCC------------------eeC---------------------------------
Q psy15734 155 PYVAWRREDGKAI---------NYNG------------------ELV--------------------------------- 174 (314)
Q Consensus 155 p~~~W~~~~~~~~---------~~~~------------------~~~--------------------------------- 174 (314)
+.+.|++ ++..+ ..++ .+.
T Consensus 164 ~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 242 (457)
T 1hzh_H 164 VTVSWNS-GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAP 242 (457)
T ss_dssp CEEEETT-TTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCC
T ss_pred eEEEEEe-CCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCc
Confidence 7999998 44221 0111 000
Q ss_pred ----CCeE-EcCCCcce-eecCccEEEEEEEeecCCc----eeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeec
Q psy15734 175 ----PPML-TIPNQLEG-AFVSQTVELHCHTEAFPAS----LNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSI 243 (314)
Q Consensus 175 ----~p~~-~~~~~~~~-v~~g~~~~l~C~~~g~p~p----~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~ 243 (314)
+|.+ ..++.... +.+|+++.|.|.+.|.|++ .+.|++++..+ ............++ +...+.|.|...
T Consensus 243 ~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~-~~~~~~~~~~~~~g~~~~~~~l~i~~~ 321 (457)
T 1hzh_H 243 ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEV-HNAKTKPREEQYNSTYRVVSVLTVLHQ 321 (457)
T ss_dssp CCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEE-CCCEEEEEEECTTSCEEEEEEECCCHH
T ss_pred cccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccc-cccccccceecCCCcEEEEEEEEECHH
Confidence 1222 22222222 5679999999999998653 89999975433 22111111112222 333345555444
Q ss_pred CCCCCeEEEEEEeeCCCCceeEEEEEE--EecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 244 LSHQFGSYRCVAVNALGETDGFIKVYV--NLVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V--~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
..+|+|.|+|.|.|..+.......+.+ .....+.+.+.... ......+.|.|.+++++ .+.|.
T Consensus 322 d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~ 392 (457)
T 1hzh_H 322 DWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWE 392 (457)
T ss_dssp HHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred HccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEEEeEECCCCEEEEE
Confidence 445599999999988665544433332 22223444433211 12225799999997665 78885
No 57
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.94 E-value=1.1e-24 Score=191.41 Aligned_cols=276 Identities=16% Similarity=0.193 Sum_probs=171.2
Q ss_pred ecCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-cee---EEEeee------eeeecCcCEEEEeCC-ceeEEEEE
Q psy15734 25 AEPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQT---ILSIHH------KVVTQNKRVSITFND-HRSWFLHL 91 (314)
Q Consensus 25 ~~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~---~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i 91 (314)
+.++..+.+.+|++++|.|.+.+.+ ...+.|||.. +.. +..... ......+|+.+..+. ...++|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGL 84 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEE
Confidence 4567788999999999999997653 5789999964 211 111100 001124577766542 34468999
Q ss_pred eeecCCCCeEEEEEEecCCC-------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CC-C-ce
Q psy15734 92 RDVQETDRGWYMCQINTVPM-------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-P-YV 157 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p-~~ 157 (314)
.+++.+|+|.|.|.+.+... ......|.|.. +|.+.... + ..+.+|+.+.|.|.+.|. |. | .+
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~--~~~~~g~~v~L~C~~~g~~P~~p~~v 161 (475)
T 1iga_A 85 SSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-L--CSTQPDGNVVIACLVQGFFPQEPLSV 161 (475)
T ss_pred CCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-c--cccCCCCeEEEEEEEeeecCCCceEE
Confidence 99999999999999976532 12345677763 34444322 1 123689999999999987 65 5 99
Q ss_pred EEEcCCCceee----------cCCe-------------------eC-----C----------------------------
Q psy15734 158 AWRREDGKAIN----------YNGE-------------------LV-----P---------------------------- 175 (314)
Q Consensus 158 ~W~~~~~~~~~----------~~~~-------------------~~-----~---------------------------- 175 (314)
.|++ ++.... .++. +. .
T Consensus 162 ~W~~-~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~ 240 (475)
T 1iga_A 162 TWSE-SGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTP 240 (475)
T ss_pred EEcC-CCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccC
Confidence 9988 442110 1110 00 0
Q ss_pred ------CeE-EcCCCcceeecCccEEEEEEEeecCC---ceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEEEEeecC
Q psy15734 176 ------PML-TIPNQLEGAFVSQTVELHCHTEAFPA---SLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTLKIRSIL 244 (314)
Q Consensus 176 ------p~~-~~~~~~~~v~~g~~~~l~C~~~g~p~---p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L~i~~~~ 244 (314)
|.+ ..++....+.+|+++.|.|.+.|.++ +.+.| . ++.... ......... .+.+...+.|.|.++.
T Consensus 241 ~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~-~~~~~~~~~~~g~~~~~~~L~I~~~~ 317 (475)
T 1iga_A 241 SPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKS-AVQGPPERDLCGCYSVSSVLPGCAEP 317 (475)
T ss_pred CCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCC-ccccCceECCCCCEEEEEEEEEchHH
Confidence 111 11222223578999999999998755 68999 4 333221 111111111 2234566799999999
Q ss_pred CCCCeEEEEEEeeCCCCceeEEEEEEEe-cCCCeeEEEEc-----cccccEeEEEEEeeccCC--CccceE
Q psy15734 245 SHQFGSYRCVAVNALGETDGFIKVYVNL-VDGDIFQIRKM-----SRLHMGAYLCIASNGVVP--SVSHRI 307 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~-~~~~~~~~~~~-----~~~~~g~~~C~a~~~~~~--~~~w~v 307 (314)
.+|+|.|+|.|.|..|.......|.+.. ...+.+.+... ..++...+.|.|.+++++ .+.|..
T Consensus 318 ~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k 388 (475)
T 1iga_A 318 WNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ 388 (475)
T ss_pred hccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEE
Confidence 9999999999999998765555554321 22233333222 233445799999997554 788853
No 58
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.94 E-value=6.7e-25 Score=181.53 Aligned_cols=226 Identities=19% Similarity=0.235 Sum_probs=150.2
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. .+. ..+.++.+.........|.|.+++.+|+
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~-~~~-------~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 74 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGK-EII-------ADGLKYRIQEFKGGYHQLIIASVTDDDA 74 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTE-ECC-------CCSSSEEEEEETTTEEEEEESSCCGGGC
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCE-Ecc-------cCCCeEEEEECCCCEEEEEEccCChhhC
Confidence 57899999999999999999999999998889999999543 221 2233454443333344899999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCceeeec---CcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRILLDR---TSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~---~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|.|+|.+.+. +.....+.|.|..+|.+.... .+....+..|+.+.|.|.+.+.|.|.+.|++
T Consensus 75 G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~-------------- 140 (305)
T 2nzi_A 75 TVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK-------------- 140 (305)
T ss_dssp SEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEE--------------
T ss_pred eEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEE--------------
Confidence 9999999765 334555667776655432210 1123445556666666666665555666665
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEee-cCCCCCeEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRS-ILSHQFGSYRCV 254 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~~d~G~Y~C~ 254 (314)
+ +..+....++.+....+ ...|.|.+ +..+|+|.|+|.
T Consensus 141 ------------------------------------~-~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~~d~G~Y~C~ 179 (305)
T 2nzi_A 141 ------------------------------------G-QDLIDNNGHYQVIVTRS----FTSLVFPNGVERKDAGFYVVC 179 (305)
T ss_dssp ------------------------------------S-SSBCCSSSSCEEEECSS----EEEEEETTCCCSTTCEEEEEE
T ss_pred ------------------------------------C-CEECCCCCcEEEEEcCC----ceEEEEecCCccCccEEEEEE
Confidence 2 22222222332221111 24899999 999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCeeEEEEc--c-----------ccccE--eEEEEEeeccCCCccceEE
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDIFQIRKM--S-----------RLHMG--AYLCIASNGVVPSVSHRIM 308 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~~~~~~~--~-----------~~~~g--~~~C~a~~~~~~~~~w~v~ 308 (314)
|.|..|.....+.|.|...|.++..+.-. . ..+.+ ...|.+...+.+...|...
T Consensus 180 a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~ 248 (305)
T 2nzi_A 180 AKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRV 248 (305)
T ss_dssp EEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEE
T ss_pred EEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEEC
Confidence 99999999999999998877655433211 0 11122 3677777777777788643
No 59
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.94 E-value=1.8e-25 Score=172.14 Aligned_cols=185 Identities=20% Similarity=0.340 Sum_probs=128.9
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCC-ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLR-EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
++.|..++..+.+.+|+++.|.|.+.+.+ .+.+.|++.++..+. ....++.+.......+.|.|.+++.+|+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 74 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWNDDDSSTLTIYNANIDDA 74 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC-------CBSSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc-------CCCCeEEEEECCCCceEEEEccCCcccC
Confidence 46777888899999999999999998865 789999994444332 2345565554433445899999999999
Q ss_pred eEEEEEEecCC--CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCe
Q psy15734 100 GWYMCQINTVP--MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPM 177 (314)
Q Consensus 100 G~Y~C~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~ 177 (314)
|.|+|.+.+.. .....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.|.+.|++ ++..
T Consensus 75 G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~----------- 140 (191)
T 1epf_A 75 GIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRD----------- 140 (191)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEECCSEEEECC--SSEECCTTSCEEECCEEECSSCCEEEEEE-TTEE-----------
T ss_pred EEEEEEEEcCCCcceEEEEEEEeecCceEecCC--CcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEE-----------
Confidence 99999997753 33445567777676665433 34556677777777777777777777777 3222
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEee
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVN 257 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 257 (314)
+............++ .|.|.++..+|+|.|+|.|.|
T Consensus 141 ---------------------------------------~~~~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~a~n 176 (191)
T 1epf_A 141 ---------------------------------------VILKKDVRFIVLSNN-----YLQIRGIKKTDEGTYRCEGRI 176 (191)
T ss_dssp ---------------------------------------GGGGCCTTEEECTTS-----CEEETTCCGGGCEEEEEEEEE
T ss_pred ---------------------------------------eeccCCceEEEecCC-----eEEECCCChhhCEEEEEEEEE
Confidence 111111112222333 899999999999999999999
Q ss_pred CCCCceeEEEEEE
Q psy15734 258 ALGETDGFIKVYV 270 (314)
Q Consensus 258 ~~g~~~~~~~l~V 270 (314)
..+.......+.|
T Consensus 177 ~~~~~~~~~~i~v 189 (191)
T 1epf_A 177 LARGEINFKDIQV 189 (191)
T ss_dssp GGGTEEEEEEEEE
T ss_pred ecceeEEEEEEEE
Confidence 9876655555554
No 60
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.94 E-value=5.5e-25 Score=169.38 Aligned_cols=183 Identities=19% Similarity=0.319 Sum_probs=129.8
Q ss_pred CCCceecCCcceEEEc-CCcEEEEEEecCCCc--eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 20 DMPRFAEPVANVTATV-GKEALMACVVENLRE--YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~-g~~~~l~C~~~~~~~--~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.+|.+..++ ...+.+ |+++.|.|.+.+.+. +.+.|++++ ..+. .+.... ..+.|.|.+++.
T Consensus 2 ~~P~i~~~~-~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~-~~~~--------~~~~~~------~~~~L~i~~~~~ 65 (190)
T 2wv3_A 2 NEPRIVTSE-EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNG-VELT--------ATRKNA------SNMEYRINKPRA 65 (190)
T ss_dssp -CCEEEECC-CEECCCSSSCEEEEEEEEECSSCEEEEEEEETT-EECT--------TCCBCC------SEEEEEESSCCG
T ss_pred CCCcccccc-eEEEccCCceEEEEEEeccCCCCceEEEEEECC-EECc--------ccceEe------ccEEEEEecCCc
Confidence 357776654 455666 999999999987765 899999954 3221 111110 224899999999
Q ss_pred CCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcC-CCceeecCCeeCC
Q psy15734 97 TDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRE-DGKAINYNGELVP 175 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~-~~~~~~~~~~~~~ 175 (314)
+|+|.|+|.+.+.+.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+.|+|.|.+.|++. ++..+.
T Consensus 66 ~d~G~Y~C~~~n~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~------- 136 (190)
T 2wv3_A 66 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHK--RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE------- 136 (190)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEECCCEEEEEC--SEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE-------
T ss_pred ccCEEEEEEEEeCCcccccEEEEEecCCcccccC--CcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee-------
Confidence 9999999999776555667788888888876653 456678888888888888888888888873 221110
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecC-CCCCeEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSIL-SHQFGSYRCV 254 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~~d~G~Y~C~ 254 (314)
......++.+.. ++ ..++|.|.++. .+|+|.|+|.
T Consensus 137 ----------------------------------------~~~~~~~~~~~~--~~--~~~~L~i~~~~~~~d~G~Y~C~ 172 (190)
T 2wv3_A 137 ----------------------------------------ISNSSGRFFIIN--KE--NYTELNIVNLQITEDPGEYECN 172 (190)
T ss_dssp ----------------------------------------CCCTTSCEEEEE--CS--SEEEEEECSCCTTTSCEEEEEE
T ss_pred ----------------------------------------eecCCCeEEEec--CC--CeeEEEEEeccccCCCEEEEEE
Confidence 000112222211 11 12389999999 7999999999
Q ss_pred EeeCCCCceeEEEEEEE
Q psy15734 255 AVNALGETDGFIKVYVN 271 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~ 271 (314)
|.|..|....++.|.|.
T Consensus 173 a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 173 ATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSSCEEEEEEEEEEE
T ss_pred EEecCCcceeEEEEEEE
Confidence 99999999999888875
No 61
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.94 E-value=2.2e-25 Score=192.35 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=143.7
Q ss_pred eeeccCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEe
Q psy15734 13 KTKCEKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLR 92 (314)
Q Consensus 13 ~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 92 (314)
...+.+..+|.+ .+.....+..|+.+.|.|.+.|.|.+.+.|++++.. +... .......+... ..
T Consensus 132 ~~~l~V~~~p~~-~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~-~~~~-----~~~~~~~~~~~-----~~--- 196 (423)
T 3qs7_E 132 LFTVSIRNTLLY-TLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQ-GESC-----KEESPAVVKKE-----EK--- 196 (423)
T ss_dssp EEEEEEC------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------------CEEEC-----CS---
T ss_pred EEEEEEecCccc-cccCCcEeccCCceEEEEEEeeecCCeEEEEECCCC-Cccc-----ccccccccccc-----ce---
Confidence 333344444443 222334456788999999999999999999996542 1100 00000001100 01
Q ss_pred eecCCCCeEEEEEEecCCCcce--eEEEEEEeCCceeeecCcceeEEecCceEEEEEEecc-cCCCceEEEcCCCceeec
Q psy15734 93 DVQETDRGWYMCQINTVPMTSQ--KGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVG-YPEPYVAWRREDGKAINY 169 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~~~~--~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~~~W~~~~~~~~~~ 169 (314)
-++..|+|.|+|.+.|..+... .+.|.|..+|.+. +....+.+|+.+.|.|.+.| .|.|.+.|++ ++..+..
T Consensus 197 ~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~----~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k-~g~~l~~ 271 (423)
T 3qs7_E 197 VLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTT----LPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEE 271 (423)
T ss_dssp EECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSS----TTEEEEETTSCEEEEEEEEESSSCCCEEEEE-SSSBCCG
T ss_pred EEecccCeEEEEEEEcCCCCcceeeEEEEEecCCccC----CCceEEeCCCeEEEEEEEEcCCCCcEEEEEE-CCEEccc
Confidence 1267899999999987643322 3456665555442 34677899999999999998 6779999999 5544322
Q ss_pred CC-----------------eeC------------------------------CCeEEcCC--CcceeecCccEEEEEEEe
Q psy15734 170 NG-----------------ELV------------------------------PPMLTIPN--QLEGAFVSQTVELHCHTE 200 (314)
Q Consensus 170 ~~-----------------~~~------------------------------~p~~~~~~--~~~~v~~g~~~~l~C~~~ 200 (314)
.. .+. +|.+...+ ....+.+|+++.|.|.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~ 351 (423)
T 3qs7_E 272 GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFK 351 (423)
T ss_dssp GGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEE
T ss_pred cceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEE
Confidence 10 010 55554433 456678899999999999
Q ss_pred ecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 201 AFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 201 g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|+|.|.+.|++++. .+....... .+.+ .+.+.....+|+|.|+|.|.|..|....++.|.|...|++
T Consensus 352 g~P~p~i~W~k~g~-~l~~~~~~~----~~~~----~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~ 418 (423)
T 3qs7_E 352 AYPQIRCTWTFSRK-SFPCEQKGL----DNGY----SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKH 418 (423)
T ss_dssp EESCCEEEEEETTE-EEECBCCBC----SSSS----EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-------
T ss_pred EcCCCeEEEEECCE-ECCCccccc----cCCc----EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCcc
Confidence 99999999999744 343322100 0010 3333566779999999999999999999999999888754
No 62
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.94 E-value=1.1e-25 Score=174.59 Aligned_cols=180 Identities=19% Similarity=0.280 Sum_probs=114.1
Q ss_pred ceEEEcCCcEEEEEEe---cCCCceEEEEEEcCceeEEEe----eeeee----ecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 30 NVTATVGKEALMACVV---ENLREYKVAWVKMITQTILSI----HHKVV----TQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~---~~~~~~~v~W~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
.+++..|++++|.|.. .+.|.+.|.|+|++....... ..... ....++.+.... ..+.|.|.+++.+|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA-NTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEET-TEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcC-CEEEEEEccCCHHH
Confidence 5789999999999964 567889999999643211110 00000 112344443332 34589999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCe
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPM 177 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~ 177 (314)
+|.|+|.+.|. +.....+.|.|..||.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+++++.
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~--~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~------------ 146 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHS--ERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGV------------ 146 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEE--EECCSSCSCCEEEEEEEEEESCCEEEECCC---------------
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeecc--eeEEEcCCCEEEEEEEcCCCCCCEEEEEECCee------------
Confidence 99999999775 444556678887766655432 444566777777777777777777777763321
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeec-CCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIIT-GDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~-~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
.... ....++....++ ....|.|.+++.+|+|.|+|.|.
T Consensus 147 --------------------------------------~~~~~~~~~r~~~~~~g--~l~il~i~~v~~~D~G~YtC~A~ 186 (203)
T 4fa8_A 147 --------------------------------------EPAPTAANGGVMKEKDG--SLSVAVDLSLPKPWHLPVTCVGK 186 (203)
T ss_dssp -----------------------------------------------CCEECTTS--CEEEEEEEEECSSCCCCEEEEEE
T ss_pred --------------------------------------ecCcccccceEEEeCCC--CEEEEEECCCCHHHCEEEEEEEE
Confidence 1110 011111122222 11266778999999999999999
Q ss_pred eCCCCcee
Q psy15734 257 NALGETDG 264 (314)
Q Consensus 257 n~~g~~~~ 264 (314)
|..|.+..
T Consensus 187 N~~G~a~~ 194 (203)
T 4fa8_A 187 NDKEEAHG 194 (203)
T ss_dssp SSSCEEEE
T ss_pred cCCCEEEE
Confidence 99998765
No 63
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.94 E-value=1.9e-27 Score=206.62 Aligned_cols=278 Identities=15% Similarity=0.204 Sum_probs=171.7
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEE---Eeee------eeeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTIL---SIHH------KVVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ +..+. .... ......+|+.+..+. ...++|.|.
T Consensus 4 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 83 (434)
T 1igy_B 4 QESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLS 83 (434)
T ss_dssp ECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEEC
T ss_pred ECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEEC
Confidence 345677899999999999998753 6789999964 22211 1000 001124576665432 234579999
Q ss_pred eecCCCCeEEEEEEecCC-CcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCc
Q psy15734 93 DVQETDRGWYMCQINTVP-MTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGK 165 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~ 165 (314)
+++.+|+|.|+|.+.+.. .......|.|.. +|.+.... ....+.+|+.+.|.|.+.|. |.| .+.|++ ++.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k-~~~ 160 (434)
T 1igy_B 84 SLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSL 160 (434)
T ss_dssp SBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEEC--CCCCCCCTTEEEEEEEEEEEBSSCCEEEETT-TTB
T ss_pred CCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcC--CccccCCCCcEEEEEEEeeecCCCeEEEEee-CCc
Confidence 999999999999996632 233445677753 45554332 12235789999999999986 776 999998 443
Q ss_pred eee--------c------------------CCeeC--------C------------------------CeE-EcCCCcce
Q psy15734 166 AIN--------Y------------------NGELV--------P------------------------PML-TIPNQLEG 186 (314)
Q Consensus 166 ~~~--------~------------------~~~~~--------~------------------------p~~-~~~~~~~~ 186 (314)
.+. . ++.+. . |.+ ..++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~ 240 (434)
T 1igy_B 161 SSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKD 240 (434)
T ss_dssp CSSEEECCCEECSSCEEEEEEEEEETTTTTSSCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHH
T ss_pred CCCeEecCceecCCcEEEEEEEEEcchhcCCCcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHH
Confidence 210 0 01100 0 222 22332222
Q ss_pred -eecCccEEEEEEEeecC----CceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 187 -AFVSQTVELHCHTEAFP----ASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 187 -v~~g~~~~l~C~~~g~p----~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
+.+|+++.|.|.+.|.| .+.+.|++++................+.+...+.|.|.++..+|+|.|+|.|.|..|.
T Consensus 241 ~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 320 (434)
T 1igy_B 241 TLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFP 320 (434)
T ss_dssp HHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCS
T ss_pred hcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCC
Confidence 78899999999999984 3589999986543221111111111222344558999999999999999999999886
Q ss_pred ce--eEEEEEEEecCCCeeEEEEc----cccccEeEEEEEeeccCC--Cccce
Q psy15734 262 TD--GFIKVYVNLVDGDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 262 ~~--~~~~l~V~~~~~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
.. ..+.+.+.....+.+.+... ..+....+.|.+.+++++ .++|.
T Consensus 321 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 373 (434)
T 1igy_B 321 APIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQ 373 (434)
T ss_dssp SCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEE
T ss_pred CceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEE
Confidence 53 33332112222233333221 123346799999997554 78885
No 64
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.93 E-value=5e-25 Score=178.71 Aligned_cols=208 Identities=18% Similarity=0.178 Sum_probs=142.7
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecC-CCce--EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeee---
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVEN-LREY--KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDV--- 94 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~--- 94 (314)
+|.+..+ ..+.+|+++.|.|.+.+ .|.+ .+.|++++ ..+.. .+...+. .|.+..+
T Consensus 6 ~p~~~~~---~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~-~~l~~------------~~~~~~~---~~~~~~~~~~ 66 (265)
T 2oz4_A 6 PPQLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGD-QRLNP------------TVTYGND---SFSAKASVSV 66 (265)
T ss_dssp CCEEECC---SEEETTEEEEEEEEEESCSCGGGCEEEEEETT-EECCC------------EEEECSS---EEEEEEEEEE
T ss_pred CCccccC---ceEecCCCEEEEEEccCCCCCcceEEEEEeCC-EECCc------------eEeeCCC---eEEEEeeccc
Confidence 4554433 36899999999999988 6666 99999954 32211 1111111 3444444
Q ss_pred cCCCCeE--EEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC
Q psy15734 95 QETDRGW--YMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG 171 (314)
Q Consensus 95 ~~~d~G~--Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~ 171 (314)
+.+|+|. |+|.+.+. +.......|.|...|...... ....+.+|+.+.|.|.+. |.+.+.| ++..+...+
T Consensus 67 ~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W---~g~~~~~~~ 139 (265)
T 2oz4_A 67 TAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL---NGVPAQPLG 139 (265)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE---SSCSSSCCS
T ss_pred ccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeec--CCceecCCCcEEEEEEcc--CCCEEEE---CCEEccCCC
Confidence 7888885 99999775 445566778887644322222 345678899999999988 8899999 444432211
Q ss_pred ee----------------C------------------------CCeEEcC--CCcceeecCccEEEEEEEeecCCceeEE
Q psy15734 172 EL----------------V------------------------PPMLTIP--NQLEGAFVSQTVELHCHTEAFPASLNYW 209 (314)
Q Consensus 172 ~~----------------~------------------------~p~~~~~--~~~~~v~~g~~~~l~C~~~g~p~p~~~W 209 (314)
.. . +|.+... +....+.+|+++.|.|.+.|.|.|.+.|
T Consensus 140 ~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W 219 (265)
T 2oz4_A 140 PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKC 219 (265)
T ss_dssp SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEE
T ss_pred CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEE
Confidence 00 0 2332222 3455788999999999999999999999
Q ss_pred ecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 210 TNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
++++.... ..+ .| ..+..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 220 ~~~~~~~~-----------~~g-----~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 220 LKDGTFPL-----------PIG-----ES--VTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp EETTTEEC-----------CTT-----SC--EECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EECCcccC-----------CCC-----cE--EEeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 99865111 111 22 24888999999999999999999999998864
No 65
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.93 E-value=1.3e-24 Score=167.05 Aligned_cols=180 Identities=19% Similarity=0.318 Sum_probs=126.8
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEE
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWY 102 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 102 (314)
.|..++..+.+.+|+++.|.|.+.+.+. .+.|++.++..+ ....++.+..++.. ..|.|.+++.+|+|.|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~--------~~~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y 73 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKI--------ISTQRVVVQKEGVR-SRLTIYNANIEDAGIY 73 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBC--------CCCSSEEEEEETTE-EEEEECSCCGGGCEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCcc--------CCCceEEEECCCCe-EEEEEccCCcccCeEE
Confidence 4567788999999999999999988776 999999554432 23445555544322 3899999999999999
Q ss_pred EEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEc
Q psy15734 103 MCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTI 180 (314)
Q Consensus 103 ~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~ 180 (314)
+|.+.+.... +..+.|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.|.+.|++ ++..
T Consensus 74 ~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~-------------- 136 (189)
T 2v44_A 74 RCQATDAKGQTQEATVVLEIYQKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEE-------------- 136 (189)
T ss_dssp EEEEECTTSCEEEEEEEEEEECCCEEESCC--CSEEEETTSCEEECCEEECSSCCEEEEEE-EC----------------
T ss_pred EEEEEeCCCCcEEEEEEEEEecCCceeecC--CcEEEeCCCCEEEEEEECcCCCCcEEEEE-CCcE--------------
Confidence 9999765332 456677777777665433 34566778888888887777777777777 3221
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee-cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII-TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
... ...++ ....++ .|.|.++..+|+|.|+|.|.|..
T Consensus 137 -----------------------------------~~~~~~~~~--~~~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~ 174 (189)
T 2v44_A 137 -----------------------------------VTTISDNRF--AMLANN-----NLQILNINKSDEGIYRCEGRVEA 174 (189)
T ss_dssp -----------------------------------CEECCCTTE--EECTTS-----CEEETTCCGGGCEEEEEEEEETT
T ss_pred -----------------------------------EeccCCCCE--EEecCC-----cEEEEEcCcccCeEEEEEEEccc
Confidence 111 11111 122333 89999999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy15734 260 GETDGFIKVYVN 271 (314)
Q Consensus 260 g~~~~~~~l~V~ 271 (314)
|.......+.|.
T Consensus 175 ~~~~~~~~~~v~ 186 (189)
T 2v44_A 175 RGEIDFRDIIVI 186 (189)
T ss_dssp TTEEEEEEEEEE
T ss_pred cCceeeeeEEEE
Confidence 877655554443
No 66
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.4e-25 Score=171.05 Aligned_cols=184 Identities=27% Similarity=0.454 Sum_probs=125.4
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
+|.|...+....+.+|+++.|.|.+.+.+.+.+.|++++.. +. ...+.++.+..+. .|.|.+++.+|+|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~------~~~~~~~~~~~~~----~L~i~~~~~~d~G 70 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEE-VT------TISDNRFAMLANN----NLQILNINKSDEG 70 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC------C------BCCCTTEEECTTS----CEEETTCCGGGCE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCcc-ce------eccCCeEEEecCC----CEEEeeCCHhHCc
Confidence 57888889999999999999999999888889999995532 21 1123455443322 6999999999999
Q ss_pred EEEEEEecCCCc---ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCe
Q psy15734 101 WYMCQINTVPMT---SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPM 177 (314)
Q Consensus 101 ~Y~C~~~~~~~~---~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~ 177 (314)
.|+|.+.+.... .....+.|..+|.+..........+.+|+.+.|.|.+.+.|.|.+.|++ ++.
T Consensus 71 ~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~------------ 137 (189)
T 2v5t_A 71 IYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGK------------ 137 (189)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTE------------
T ss_pred EEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE-CCE------------
Confidence 999999765322 2334566666665544322223445566667777766666666666666 322
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEee
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVN 257 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 257 (314)
.+.....+... ..+. .|.|.++..+|+|.|+|.|.|
T Consensus 138 --------------------------------------~~~~~~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~a~n 173 (189)
T 2v5t_A 138 --------------------------------------LIEENEKYILK-GSNT-----ELTVRNIINSDGGPYVCRATN 173 (189)
T ss_dssp --------------------------------------ECCCSSSEEEE-TTTT-----EEEECSCCGGGCEEEEEEEEE
T ss_pred --------------------------------------ECcCCCcEEEe-cCCC-----EEEEcCCChhhCeeEEEEEEe
Confidence 22222222211 1122 899999999999999999999
Q ss_pred CCCCceeEEEEEEEe
Q psy15734 258 ALGETDGFIKVYVNL 272 (314)
Q Consensus 258 ~~g~~~~~~~l~V~~ 272 (314)
..|....++.|.|.+
T Consensus 174 ~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 174 KAGEDEKQAFLQVFV 188 (189)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEe
Confidence 999999998888764
No 67
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=1e-24 Score=170.86 Aligned_cols=191 Identities=23% Similarity=0.331 Sum_probs=118.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEE-eCCceeEEEEEeee-cC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSIT-FNDHRSWFLHLRDV-QE 96 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~~-~~ 96 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+. ..+.... ..+.....|.|.++ +.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~-~~~~---------~~~~~~~~~~~~~~~~L~i~~v~~~ 73 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKG-KKVS---------NQRFEVIEFDDGSGSVLRIQPLRTP 73 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT-EECC---------CTTEEEEEEGGGTEEEEEECSCCTT
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECC-cCCC---------CCceeEEEEcCCCceEEEEeccCCC
Confidence 45788988899999999999999999998888999999954 3221 1222221 22223347999999 49
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEEeCC-------ceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceee
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVVVPP-------RILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p-------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~ 168 (314)
+|+|.|+|.+.+. +.....+.|.|..++ .+... +....+..|+.+.|.|.+.|.|.|.+.|++
T Consensus 74 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~------- 144 (212)
T 2yd6_A 74 RDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMG--PQLKVVERTRTATMLCAASGNPDPEITWFK------- 144 (212)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEEE-------
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecC--CcceeEecCCCEEEEEEecCCCCCeEEEEE-------
Confidence 9999999999765 333445566666532 22111 122334445555555555444444555554
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
++..+.......++...... ..+.|.|.++..+|+
T Consensus 145 -------------------------------------------~g~~l~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~ 179 (212)
T 2yd6_A 145 -------------------------------------------DFLPVDTSNNNGRIKQLRSE--SIGALQIEQSEESDQ 179 (212)
T ss_dssp -------------------------------------------TTEEC------CCEEEEEET--TEEEEEECSCCGGGC
T ss_pred -------------------------------------------CCccccCcCCCceEEEEecC--CeEEEEEcCCCcccC
Confidence 32222111111111111111 124999999999999
Q ss_pred eEEEEEEeeCCCCce-eEEEEEEEec
Q psy15734 249 GSYRCVAVNALGETD-GFIKVYVNLV 273 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~-~~~~l~V~~~ 273 (314)
|.|+|.|.|..|... ..+.|.|...
T Consensus 180 G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 180 GKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEEEEEECCCCccccccccEEEEec
Confidence 999999999999774 4566666554
No 68
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.93 E-value=3.1e-25 Score=190.12 Aligned_cols=225 Identities=19% Similarity=0.273 Sum_probs=156.2
Q ss_pred CcceEEEcCCcEEEEEEe-cCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCe---EEE
Q psy15734 28 VANVTATVGKEALMACVV-ENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG---WYM 103 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G---~Y~ 103 (314)
+....+.+|+++.|.|.+ .+.|.+.+.|++++....... .....+.++....++ .|.|.+++.+|+| .|+
T Consensus 107 ~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~--~~~~~~~~~~~~~~~----~L~i~~v~~~d~G~~~~Y~ 180 (395)
T 1bih_A 107 THEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNA--DVTDFDRRITAGPDG----NLYFTIVTKEDVSDIYKYV 180 (395)
T ss_dssp EEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGG--CCCCCCTTEEECTTS----CEEEEEECGGGCCSSEEEE
T ss_pred CcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCccc--ccccccccEEEcCCC----cEEEEEEeeccCCCceEEE
Confidence 446678899999999996 677889999999641100000 000113344443322 6999999999999 999
Q ss_pred EEEecCCCc-ceeEEE---EEEeCCc-------eeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC-
Q psy15734 104 CQINTVPMT-SQKGYL---QVVVPPR-------ILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG- 171 (314)
Q Consensus 104 C~~~~~~~~-~~~~~l---~v~~~p~-------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~- 171 (314)
|.+.+.... ...... .+...+. .... .+....+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....
T Consensus 181 C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~-~g~~~~~~~~ 258 (395)
T 1bih_A 181 CTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY-VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFK-NGKDVNGNPE 258 (395)
T ss_dssp EEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE-ECCSEEEETTSCEEEEEEEECSSCCCCEEEE-TTEECCCCTT
T ss_pred EEEEecccceEEEeeeEEecccccccccccCCcCcee-cCCceEEECCCcEEEEEEeccCCCCeEEEEE-CCEEcCCCCc
Confidence 999765332 222211 1111110 0000 1345678899999999999999999999999 555543210
Q ss_pred ------------eeC----------------------------------CCeEEcCCCc-ceeecCccEEEEEEEeecCC
Q psy15734 172 ------------ELV----------------------------------PPMLTIPNQL-EGAFVSQTVELHCHTEAFPA 204 (314)
Q Consensus 172 ------------~~~----------------------------------~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~ 204 (314)
.+. +|.+...+.. ..+.+|+++.|.|.+.|.|.
T Consensus 259 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~ 338 (395)
T 1bih_A 259 DRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPA 338 (395)
T ss_dssp SSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESC
T ss_pred eeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccC
Confidence 111 5666665555 77899999999999999999
Q ss_pred ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 205 SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 205 p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
|.+.|++++ ..+. ..++.+ .++ .|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 339 p~v~W~~~g-~~~~-~~~~~~---~~~-----~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 339 PNVVWSHNA-KPLS-GGRATV---TDS-----GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CCCEEEETT-EECC-SSSEEE---ETT-----EEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CeeEEEECC-EECC-CCceEE---ECC-----EEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 999999974 3332 223322 333 9999999999999999999999999999988877
No 69
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=2.9e-25 Score=171.14 Aligned_cols=186 Identities=29% Similarity=0.513 Sum_probs=131.3
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
...+|.|..++..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ...+.++.+..++ ..|.|.+++.+
T Consensus 4 ~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~-~~~-------~~~~~~~~~~~~~---~~L~i~~~~~~ 72 (192)
T 2iep_A 4 LPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNK-ILI-------KLFDTRYSIRENG---QLLTILSVEDS 72 (192)
T ss_dssp CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETT-EEC-------CTTCTTEEEEGGG---TEEEESSCCGG
T ss_pred cCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECC-EEc-------cccCccEEEcCCc---cEEEEcCCCcc
Confidence 345688888888999999999999999988888899999954 322 1224455554332 26999999999
Q ss_pred CCeEEEEEEecCCC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 98 DRGWYMCQINTVPM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 98 d~G~Y~C~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|+|.|+|.+.+... ......|.|..+|.+...+ ....+..|+.+.|.|.+.+.|.+.+.|++ ++.
T Consensus 73 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~---------- 139 (192)
T 2iep_A 73 DDGIYCCTANNGVGGAVESCGALQVKMKPKITRPP--INVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDS---------- 139 (192)
T ss_dssp GCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECC--CCEEEETTSCEEECCEEEEESCCEEEEEE-TTE----------
T ss_pred cCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCC--cceEEeCCCcEEEEEEEeccCCceEEEEe-CCE----------
Confidence 99999999976532 3445667777766655432 34556677777777777777767777776 322
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
.+....++. ...++ .|.|.++..+|+|.|+|.|
T Consensus 140 ----------------------------------------~~~~~~~~~--~~~~~-----~L~i~~~~~~d~G~Y~C~a 172 (192)
T 2iep_A 140 ----------------------------------------ALRENSRIA--VLESG-----SLRIHNVQKEDAGQYRCVA 172 (192)
T ss_dssp ----------------------------------------ECCCCSSEE--ECTTS-----CEEESSCCGGGCEEEEEEE
T ss_pred ----------------------------------------EccCCCcEE--EecCC-----cEEEecCChhhCEEEEEEE
Confidence 222222211 12233 8999999999999999999
Q ss_pred eeCCCCc-eeEEEEEEEecC
Q psy15734 256 VNALGET-DGFIKVYVNLVD 274 (314)
Q Consensus 256 ~n~~g~~-~~~~~l~V~~~~ 274 (314)
.|..|.. +..+.|.|..+|
T Consensus 173 ~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 173 KNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EETTEEEECCCEEEEEEC--
T ss_pred EcCCCcEEEEEEEEEEEeCC
Confidence 9999987 557888887653
No 70
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.93 E-value=2.7e-26 Score=213.04 Aligned_cols=275 Identities=17% Similarity=0.265 Sum_probs=60.4
Q ss_pred CCcceEEEcCCcEEEEEEecC--CCceEEEEEEcCceeEEEeeeeeeecCcCEEEE-eCCceeEEEEEeeecCCCCeEEE
Q psy15734 27 PVANVTATVGKEALMACVVEN--LREYKVAWVKMITQTILSIHHKVVTQNKRVSIT-FNDHRSWFLHLRDVQETDRGWYM 103 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~ 103 (314)
++..+.+.+|+++.|.|.+.+ .+.+.+.|++++........ .......... ........|.|.+++.+|+|.|+
T Consensus 230 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 306 (772)
T 3v2a_R 230 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKL---VNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYT 306 (772)
T ss_dssp CCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------C---EEEEC-----CCCEEEEEEEEESSCCSTTCSEEE
T ss_pred CCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCcee---eeccccccccccceEEEEEEEECcCCcCCCeEEE
Confidence 455578999999999999976 45678999996543211000 0000000000 00112237999999999999999
Q ss_pred EEEecC-CCcceeEEEEEEeCCceeeec-CcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCe------eC-
Q psy15734 104 CQINTV-PMTSQKGYLQVVVPPRILLDR-TSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGE------LV- 174 (314)
Q Consensus 104 C~~~~~-~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~------~~- 174 (314)
|.+.+. +..+..+.|.|..+|.+.... .+....+.+|+.+.|.|.+.++|.+.+.|++ ++..+..... +.
T Consensus 307 C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~L~i 385 (772)
T 3v2a_R 307 CAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYK-NGIPLESNHTIKAGHVLTI 385 (772)
T ss_dssp EEEECSSCEEEEEEEEEEECCCC---------------------------------------------------------
T ss_pred EEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEE-CCEeCCCCceEccceeEEE
Confidence 999765 344566788888888765432 1235568899999999999999999999998 6655432211 00
Q ss_pred ----------------------------------CCeEEcC---CCcceeecCccEEEEEEEeecCCce-eEEecCCCee
Q psy15734 175 ----------------------------------PPMLTIP---NQLEGAFVSQTVELHCHTEAFPASL-NYWTNEKGDM 216 (314)
Q Consensus 175 ----------------------------------~p~~~~~---~~~~~v~~g~~~~l~C~~~g~p~p~-~~W~~~~~~~ 216 (314)
+|.+... .....+.+|+.+.|.|.+.|.|.|. +.|+++++..
T Consensus 386 ~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 465 (772)
T 3v2a_R 386 MEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEE 465 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCcc
Confidence 3333211 1112378899999999999999997 9999863221
Q ss_pred ee------------------------------cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEE
Q psy15734 217 II------------------------------TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 217 ~~------------------------------~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
.. ...........+.....+.|.|.++ +|+|.|+|.|.|..|.....+
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~ 543 (772)
T 3v2a_R 466 CANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVI 543 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeE
Confidence 00 0000000011111222358888877 799999999999999999988
Q ss_pred EEEEEecCCCeeEE-EEccccccEeEEEEEeeccCCCccceE
Q psy15734 267 KVYVNLVDGDIFQI-RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 267 ~l~V~~~~~~~~~~-~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|.|...+.-.+.. ..+..++...+.|.+.+.+.+.+.|..
T Consensus 544 ~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k 585 (772)
T 3v2a_R 544 SFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYK 585 (772)
T ss_dssp ------------------------------------------
T ss_pred EEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEE
Confidence 88888653221111 123344445699999999999999964
No 71
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.93 E-value=3.8e-24 Score=164.78 Aligned_cols=186 Identities=25% Similarity=0.432 Sum_probs=129.5
Q ss_pred CCceecCC--cceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 21 MPRFAEPV--ANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 21 ~p~~~~~~--~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+|.|..++ ..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ....++.+.... ..|.|.+++.+|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~-~~~--------~~~~~~~~~~~~---~~L~i~~~~~~d 69 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNG-KLI--------EENEKYILKGSN---TELTVRNIINSD 69 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETT-EEC--------CCSSSEEEETTT---TEEEECSCCGGG
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECC-eEc--------CCCccEEEeCCe---eEEEEecCChhc
Confidence 57766654 3578889999999999998888899999954 322 223444443322 279999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCC-CceeecCCeeCCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRED-GKAINYNGELVPP 176 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~-~~~~~~~~~~~~p 176 (314)
+|.|+|.+.+. +.....+.|.|..+|.+.... ...+.+|+.+.|.|.+.+.|.|.+.|++.+ +..+..
T Consensus 70 ~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~------- 139 (192)
T 2va4_A 70 GGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLK---NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE------- 139 (192)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC---CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECT-------
T ss_pred CcEEEEEEEccccccceEEEEEEEccCcccccC---cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeec-------
Confidence 99999999765 344456678887777665432 345667888888888888888888888832 111100
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
+. .....++..... . ..+.|.|.++..+|+|.|+|.|.
T Consensus 140 -------------------------------------~~-~~~~~~~~~~~~-~---~~~~L~i~~~~~~d~G~Y~C~a~ 177 (192)
T 2va4_A 140 -------------------------------------GD-KSLDGRIEVKGQ-H---GSSSLHIKDVKLSDSGRYDCEAA 177 (192)
T ss_dssp -------------------------------------TC-BCTTSCEEEEEE-T---TEEEEEEESCCGGGCEEEEEEEE
T ss_pred -------------------------------------cc-cccCCcEEEeec-c---CceEEEEecCCcccCEEEEEEEE
Confidence 00 000111111111 1 12489999999999999999999
Q ss_pred eCCCCceeEEEEEE
Q psy15734 257 NALGETDGFIKVYV 270 (314)
Q Consensus 257 n~~g~~~~~~~l~V 270 (314)
|..|....++.|.|
T Consensus 178 n~~g~~~~~~~l~V 191 (192)
T 2va4_A 178 SRIGGHQKSMYLDI 191 (192)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred ecCCceEEEEEEEe
Confidence 99999988888877
No 72
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=168.40 Aligned_cols=199 Identities=13% Similarity=0.105 Sum_probs=113.6
Q ss_pred CceecCCcceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCC-ceeEEEEEeeecCCCC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHKVVTQNKRVSITFND-HRSWFLHLRDVQETDR 99 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~~~~d~ 99 (314)
|.|..+. .+.+.+|+.+.|.|.+.. .|.+.+.|++++ ..+ ..+.++.+..+. ....+|.|.+++.+|+
T Consensus 4 p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng-~~l--------~~~~~~~~~~~~~~g~~~L~I~~v~~~D~ 73 (207)
T 3rbs_A 4 PFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNE-KEI--------FEGPKYKMHIDRNTGIIEMFMEKLQDEDE 73 (207)
T ss_dssp --CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETT-EEE--------CSSSSCEEEECTTTCEEEEEESCCCGGGC
T ss_pred CeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECC-EEC--------ccCCCEEEEEeCCCCEEEEEECCCChhhC
Confidence 5555544 688999999999999964 688999999954 433 233444444432 2334799999999999
Q ss_pred eEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEE
Q psy15734 100 GWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLT 179 (314)
Q Consensus 100 G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~ 179 (314)
|.|+|.+.| +.......+.+.......... ....... .. .. ...|.+.
T Consensus 74 G~Y~C~a~N-g~a~~~~~~~~~~~~~~~~~~-~~~~~~~--~~------~~-~~~P~~~--------------------- 121 (207)
T 3rbs_A 74 GTYTFQLQD-GKATNHSTVVLVGDVFKKLQK-EAEFQRQ--EW------IR-KQGPHFV--------------------- 121 (207)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECTHHHHHHHH-HHHHHHH--HH------HH-HTSSEEE---------------------
T ss_pred EEEEEEEEC-CCeEEEEEEEEEccchhhhcc-ccccccc--cc------cc-CCCCceE---------------------
Confidence 999999987 433333332211000000000 0000000 00 00 0011110
Q ss_pred cCCCcceeecCccEEEEEEEeec-CCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeC
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAF-PASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNA 258 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~-p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 258 (314)
.+. ...+.+|+++.|.|.+.|. |.|.+.|+++ +..+....++.. .+ ...+|.|.++..+|+|.|+|.|.|.
T Consensus 122 ~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~-g~~l~~~~~~~~---~~---~~~~L~I~~v~~~D~G~Y~C~a~N~ 193 (207)
T 3rbs_A 122 EYL-SWEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDF---KD---GICTLLITEFSKKDAGIYEVILKDD 193 (207)
T ss_dssp EEE-EEEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCCCCCCC---SS---EEEEEEETTCCGGGCEEEEEEEEET
T ss_pred ecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEEC-CEECCCCCceEc---CC---CEEEEEECCCCcccCEEEEEEEEcC
Confidence 000 1234455566666666655 5566666664 333322222211 11 1248999999999999999999999
Q ss_pred CCCceeEEEEEE
Q psy15734 259 LGETDGFIKVYV 270 (314)
Q Consensus 259 ~g~~~~~~~l~V 270 (314)
.|....++.|.+
T Consensus 194 ~G~~~~~~~L~~ 205 (207)
T 3rbs_A 194 RGKDKSRLKLVD 205 (207)
T ss_dssp TEEEEEEEEECC
T ss_pred CCEEEEEEEEec
Confidence 999998888754
No 73
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=3.8e-24 Score=165.32 Aligned_cols=180 Identities=24% Similarity=0.361 Sum_probs=127.2
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEec-CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCc--e----eEEEEEe
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVE-NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDH--R----SWFLHLR 92 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~L~i~ 92 (314)
++|.|+.++..+.+.+|+++.|.|.+. +.+.+.+.|++++ ..+.... ..++.+..... . ...|.|.
T Consensus 1 e~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g-~~l~~~~------~~~~~~~~~~~~~~~~~~~~~L~i~ 73 (195)
T 2c5d_C 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDG-QILELAD------STQTQVPLGEDEQDDWIVVSQLRIT 73 (195)
T ss_dssp -CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETT-EECCSCE------EEEEEEECSSSTTSEEEEEEEEEES
T ss_pred CCCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECC-EEcccCC------CCceEEEEccccccceeeccEEEEE
Confidence 368899999999999999999999998 8888899999954 4332110 01222221111 0 3489999
Q ss_pred eecCCCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC-ceEEEcCCCceeec
Q psy15734 93 DVQETDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP-YVAWRREDGKAINY 169 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~~~W~~~~~~~~~~ 169 (314)
+++.+|+|.|+|.+.+.... +..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.| .+.|++ ++..+
T Consensus 74 ~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~-- 148 (195)
T 2c5d_C 74 SLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEP--EDRTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPL-- 148 (195)
T ss_dssp SCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECC--CCEEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBS--
T ss_pred eccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCC--CcEEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEec--
Confidence 99999999999999765322 334678887777765533 44667778888888888877777 788887 33221
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
...... .. ...|.|.+++ |+|
T Consensus 149 ------------------------------------------------~~~~~~----~~-----~~~L~i~~~~--d~G 169 (195)
T 2c5d_C 149 ------------------------------------------------ATAPGH----GP-----QRSLHVPGLN--KTS 169 (195)
T ss_dssp ------------------------------------------------SSSTTS----SC-----CEEEEECCCS--SCE
T ss_pred ------------------------------------------------cCCCCc----CC-----CCeEEEcccc--cCc
Confidence 111110 11 1389999987 899
Q ss_pred EEEEEEeeCCCCce-eEEEEEE
Q psy15734 250 SYRCVAVNALGETD-GFIKVYV 270 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~-~~~~l~V 270 (314)
.|+|.|.|..|... ..+.|.|
T Consensus 170 ~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 170 SFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEEEcCCCceEEEEEEEEE
Confidence 99999999999885 7888888
No 74
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.92 E-value=4.7e-23 Score=176.27 Aligned_cols=213 Identities=20% Similarity=0.339 Sum_probs=144.9
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+|.|.. +....+.+|+++.|.|.+.+.|.+.+.|++++ +..+... ....+.++.+... ...+.|.|.+++.+|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~---~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEG---DKSLDGRIEVKGQ-HGSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC-----CCSSSSEEEEEC-SSEEEEEEESCCGGGC
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccC---cCCCCCeEEEecc-CCcceEEEcccChhhC
Confidence 466666 55677889999999999999999999999962 4433210 0122456666543 2345899999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeE
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPML 178 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~ 178 (314)
|.|+|.+.|. +..+..+.|.|..+|.+... +....+.+|+.+.|.|.+.|.|.+.+.|++ ++..+
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~--~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l----------- 141 (389)
T 2jll_A 76 GRYDCEAASRIGGHQKSMYLDIEYAPKFISN--QTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVL----------- 141 (389)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEECCS--CCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEES-----------
T ss_pred EEEEEEEEeCCCCcceEEEEEEEeCCEEecC--cceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccC-----------
Confidence 9999999775 55566778888877766542 233456677777788877777777777777 33322
Q ss_pred EcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 179 TIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 179 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
.... ++.+. .++ ..+.|.|.++..+|+|.|+|.|.
T Consensus 142 ---------------------------------------~~~~~~~~~~~--~~~--~~~~L~i~~~~~~d~G~Y~C~a~ 178 (389)
T 2jll_A 142 ---------------------------------------PAKNTTNLKTY--STG--RKMILEIAPTSDNDFGRYNCTAT 178 (389)
T ss_dssp ---------------------------------------SCTTCTTEEEE--ECS--SCEEEEECCCSTTSSEEEEEEEE
T ss_pred ---------------------------------------CcccCceEEEe--ccC--CEEEEEECCCChhhCEEEEEEEE
Confidence 1111 11111 111 12389999999999999999999
Q ss_pred eCCCCceeEEEEEEEecCCCeeEEEEcc-ccccEeEEEEE
Q psy15734 257 NALGETDGFIKVYVNLVDGDIFQIRKMS-RLHMGAYLCIA 295 (314)
Q Consensus 257 n~~g~~~~~~~l~V~~~~~~~~~~~~~~-~~~~g~~~C~a 295 (314)
|..|.....+.|.|...|..+..+.... ......+.|..
T Consensus 179 N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~~~~~l~w~~ 218 (389)
T 2jll_A 179 NHIGTRFQEYILALADVPSSPYGVKIIELSQTTAKVSFNK 218 (389)
T ss_dssp ETTEEEEEEEEEEECCCCCCCEEEEEEEECSSCEEEEEEC
T ss_pred cCCCcEEEEEEEEecCCCCCCcceEEeeccCCEEEEEEeC
Confidence 9999998888888877776653332211 22334566653
No 75
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.92 E-value=1e-24 Score=181.50 Aligned_cols=229 Identities=15% Similarity=0.151 Sum_probs=139.6
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
....+|.|...+. ..+.+|++++|.|.+.+. .+.+.|+|++...... . ........|.|.+++.
T Consensus 20 ~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~-----~---------~~~~~~~~L~I~~v~~ 83 (316)
T 3vh8_G 20 GGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPI-----F---------HGRIFQESFNMSPVTT 83 (316)
T ss_dssp ----CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCH-----H---------HHCCBSSCEEECSCCG
T ss_pred CCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCcccee-----e---------cCCcceEEEEECCCCc
Confidence 4456788887776 568899999999999876 6789999965431100 0 0001123799999999
Q ss_pred CCCeEEEEEEecC------CCcceeEEEEEEeC---CceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCcee
Q psy15734 97 TDRGWYMCQINTV------PMTSQKGYLQVVVP---PRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAI 167 (314)
Q Consensus 97 ~d~G~Y~C~~~~~------~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~ 167 (314)
+|+|.|+|.+.+. ...+..+.|.|... |.+...+ . ..+.+|+.++|.|.+. .+.+.+.|++ ++..+
T Consensus 84 ~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~--~-~~v~~G~~v~L~C~~~-~~~~~~~w~k-~g~~~ 158 (316)
T 3vh8_G 84 AHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHP--G-PLVKSGERVILQCWSD-IMFEHFFLHK-EGISK 158 (316)
T ss_dssp GGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEES--C-SEEETTCCEEEEEEES-SCCSEEEEEE-TTCCS
T ss_pred ccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecC--C-CccCCCCeEEEEEcCC-CCCcEEEEEE-CCCcc
Confidence 9999999998642 22345567777653 4444332 2 2378999999999985 4567899998 44433
Q ss_pred ecC------------CeeC-----------------------------------------CCeEEcCCCcceeecCccEE
Q psy15734 168 NYN------------GELV-----------------------------------------PPMLTIPNQLEGAFVSQTVE 194 (314)
Q Consensus 168 ~~~------------~~~~-----------------------------------------~p~~~~~~~~~~v~~g~~~~ 194 (314)
... ..+. +|.+...+. ..+.+|++++
T Consensus 159 ~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~ 237 (316)
T 3vh8_G 159 DPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVT 237 (316)
T ss_dssp CCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCE
T ss_pred ccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEE
Confidence 110 0000 233333332 2578899999
Q ss_pred EEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC-----CceeEEEEE
Q psy15734 195 LHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG-----ETDGFIKVY 269 (314)
Q Consensus 195 l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~ 269 (314)
|.|.+. .|.+.+.|++++........... ... ......|.|.+++ |+|.|+|.|.|..+ ..+..+.|.
T Consensus 238 L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~---~~~-~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 310 (316)
T 3vh8_G 238 LSCSSR-SSYDMYHLSREGGAHERRLPAVR---KVN-RTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVS 310 (316)
T ss_dssp EEEEES-SCCSEEEEEETTSSCCEEEECEE---CTT-SCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred EEEECC-CCCcEEEEEECCCcCCCceecee---ccC-CceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence 999997 57889999998654332111100 001 1122489999999 99999999999765 345667777
Q ss_pred EEecC
Q psy15734 270 VNLVD 274 (314)
Q Consensus 270 V~~~~ 274 (314)
|...|
T Consensus 311 V~g~p 315 (316)
T 3vh8_G 311 VTGNP 315 (316)
T ss_dssp -----
T ss_pred EeCCC
Confidence 76543
No 76
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=7.7e-24 Score=161.73 Aligned_cols=175 Identities=26% Similarity=0.397 Sum_probs=122.5
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeC-CceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFN-DHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~~d~ 99 (314)
+|.|..++..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+. ...+..+... ....+.|.|.+++.+|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~-~~~~--------~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 72 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDG-AVVQ--------NLDQLYIPVSEQHWIGFLSLKSVERSDA 72 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETT-EECC--------SSEEEEEEEETTEEEEEEEESSCCGGGC
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECC-eecC--------CCCceEEEecCCCceEEEEEeecCcccC
Confidence 578888899999999999999999998888899999954 3321 1122222211 12235899999999999
Q ss_pred eEEEEEEecCCC--cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC-ceEEEcCCCceeecCCeeCCC
Q psy15734 100 GWYMCQINTVPM--TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP-YVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 100 G~Y~C~~~~~~~--~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~~~W~~~~~~~~~~~~~~~~p 176 (314)
|.|+|.+.+... .+..+.|.|..+|.+...+ ....+.+|+.+.|.|.+.+.|.| .+.|++ ++..
T Consensus 73 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~---------- 139 (182)
T 1rhf_A 73 GRYWCQVEDGGETEISQPVWLTVEGVPFFTVEP--KDLAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTK---------- 139 (182)
T ss_dssp EEEEEEESSCTTCEECCCEEEEEECSCEEEECC--CCEEECTTCCEEEEEEEECSSSCCEEEEEE-TTEE----------
T ss_pred eEEEEEEEcCCCcEEEEEEEEEEecCCeEEecC--cceEecCCCEEEEEeEecCCCCCCEEEEEc-CCeE----------
Confidence 999999976532 3456788888888766543 44667788888888888887777 788887 3322
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
+..... . ...|.|.++ +|+|.|+|.|.
T Consensus 140 ----------------------------------------~~~~~~------~-----~~~L~i~~~--~d~G~Y~C~a~ 166 (182)
T 1rhf_A 140 ----------------------------------------IGGPAP------S-----PSVLNVTGV--TQSTMFSCEAH 166 (182)
T ss_dssp ----------------------------------------CSCSEE------S-----SEEEEECCC--SSCEEEEEEEE
T ss_pred ----------------------------------------CCCCCC------C-----ceEEEEecc--ccCeEEEEEEE
Confidence 111000 1 138999988 58999999999
Q ss_pred eCCCCce-eEEEEEE
Q psy15734 257 NALGETD-GFIKVYV 270 (314)
Q Consensus 257 n~~g~~~-~~~~l~V 270 (314)
|..|... ..+.|.|
T Consensus 167 N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 167 NLKGLASSRTATVHL 181 (182)
T ss_dssp ETTEEEECCCEEEEE
T ss_pred CCCCCcccceEEEEe
Confidence 9999874 4777766
No 77
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=9e-24 Score=165.25 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=134.7
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeee---eeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHH---KVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+.|..++..+.+.+|+++.|.|.+.+.+.+.+.|++++......... .......++.+.. +.|.|.+++.+|
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~v~~~D 76 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS-----SGITFSSVTRKD 76 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET-----TEEEESCCCGGG
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec-----eeEEEcccCccc
Confidence 45677888999999999999999998888999999966442111100 0112234555543 389999999999
Q ss_pred CeEEEEEEecCC---CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEE-ecccCCCceEEEcCCCc-eeecCCee
Q psy15734 99 RGWYMCQINTVP---MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECS-AVGYPEPYVAWRREDGK-AINYNGEL 173 (314)
Q Consensus 99 ~G~Y~C~~~~~~---~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~-~~~~p~p~~~W~~~~~~-~~~~~~~~ 173 (314)
+|.|+|.+.+.. .....+.|.|..+|.+.... ....+.+|+.+.|.|. +.+.|.|.+.|++ ++. .+......
T Consensus 77 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~~~~~ 153 (212)
T 1f97_A 77 NGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTIS--VPSSVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLTADAKK 153 (212)
T ss_dssp CEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEE--CCSEEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC-----
T ss_pred CeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccC--CccccCCCCeEEEEEEcccCcCCCEEEEEe-CCcccccccccc
Confidence 999999997642 33556778888888776554 2345778999999998 6788888999998 443 32211000
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
........+... ..+ +.|.|.++..+|+|.|+|
T Consensus 154 -----------------------------------------~~~~~~~~~~~~-~~~-----~~L~i~~~~~~d~G~Y~C 186 (212)
T 1f97_A 154 -----------------------------------------TRAFMNSSFTID-PKS-----GDLIFDPVTAFDSGEYYC 186 (212)
T ss_dssp -----------------------------------------CBSCSSSCEEEC-TTT-----CCEEESSCCGGGCEEEEE
T ss_pred -----------------------------------------cccccCceeEec-CCC-----ceEEEEecChhhCcEEEE
Confidence 000000111100 112 289999999999999999
Q ss_pred EEeeCCCCc--eeEEEEEEEec
Q psy15734 254 VAVNALGET--DGFIKVYVNLV 273 (314)
Q Consensus 254 ~a~n~~g~~--~~~~~l~V~~~ 273 (314)
.|.|..|.. +..+.|.|...
T Consensus 187 ~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 187 QAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp EEECSSSCCEECCCEEEEEESS
T ss_pred EEccccCCccccceEEEEEEEe
Confidence 999999988 55667766543
No 78
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.92 E-value=6.1e-24 Score=169.71 Aligned_cols=198 Identities=17% Similarity=0.303 Sum_probs=125.3
Q ss_pred CCCceecC----CcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 20 DMPRFAEP----VANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 20 ~~p~~~~~----~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
.+|.|..+ +..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+... .......... ..+.|.|.+++
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~-~~~~~~-----~~~~~~~~~~---~~~~L~i~~v~ 80 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNG-REFRGE-----HRIGGIKLRH---QQWSLVMESVV 80 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETT-EECCGG-----GSTTCCEEEG---GGTEEEECSCC
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECC-cccCCC-----Ccccceeeec---cceEEEEEeCC
Confidence 45666655 34789999999999999998888899999954 322110 0001112211 12379999999
Q ss_pred CCCCeEEEEEEecC-CCcceeEEEEEEeCCc---eeeecCcceeEEecCceEEEEEEecccCCCceEEEcC---CCceee
Q psy15734 96 ETDRGWYMCQINTV-PMTSQKGYLQVVVPPR---ILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRE---DGKAIN 168 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~---~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~---~~~~~~ 168 (314)
.+|+|.|+|.+.+. +.......|.|...+. ......+....+..|+.+.|.|.+.+.|.|.+.|++. ++..+
T Consensus 81 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~- 159 (241)
T 3grw_A 81 PSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKV- 159 (241)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSS-
T ss_pred cccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCccc-
Confidence 99999999999764 3344556677765221 1111123455667778888888877777777888772 22111
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceee----eEeeCCeeeEEEEEEeecC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYED----SRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~----~~~~~~~~~~s~L~i~~~~ 244 (314)
........ ..........+.|.|.++.
T Consensus 160 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 190 (241)
T 3grw_A 160 -------------------------------------------------GPDGTPYVTVLKSWISESVEADVRLRLANVS 190 (241)
T ss_dssp -------------------------------------------------CTTTCCCEEEEEEEECSBSEEEEEEEECSCC
T ss_pred -------------------------------------------------CCCCceeeeeeeEeeeeecCCceEEEECcCC
Confidence 11111000 0001111234589999999
Q ss_pred CCCCeEEEEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 245 SHQFGSYRCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.+|+|.|+|.|.|..|....++.|.|..+|..
T Consensus 191 ~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 191 ERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred cccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 99999999999999999999999999877644
No 79
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.92 E-value=2.2e-22 Score=178.06 Aligned_cols=277 Identities=15% Similarity=0.166 Sum_probs=165.5
Q ss_pred CCcceEEEcCCcEEEEEEecCCCc----eEEEEEEcC-cee---EEEeeee-----eeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 27 PVANVTATVGKEALMACVVENLRE----YKVAWVKMI-TQT---ILSIHHK-----VVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~----~~v~W~~~~-~~~---~~~~~~~-----~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
.+..+.+.+|++++|.|.+.+.+. ..+.|||.. +.. +...... .....+|+.+..+. ...++|.|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 456789999999999999976432 789999863 221 1111110 01124577776543 235689999
Q ss_pred eecCCCCeEEEEEEecCCC--------------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-C
Q psy15734 93 DVQETDRGWYMCQINTVPM--------------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-P 153 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~--------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p 153 (314)
+++.+|+|.|.|.+.+... ......|.|.. +|.+.... +.......++.+.|.|.+.+. |
T Consensus 86 ~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~-~~~~~~~~~~~v~L~C~~~g~~P 164 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPII-SGCRHPKDNSPVVLACLITGYHP 164 (512)
T ss_pred cCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEecc-CCcccccCCCeEEEEEEEEeeec
Confidence 9999999999999965421 12335677763 34443221 111101246899999999987 7
Q ss_pred CC-ceEEEcCCCcee--------ecCCe------------------eC-------------C----------CeEE----
Q psy15734 154 EP-YVAWRREDGKAI--------NYNGE------------------LV-------------P----------PMLT---- 179 (314)
Q Consensus 154 ~p-~~~W~~~~~~~~--------~~~~~------------------~~-------------~----------p~~~---- 179 (314)
.| .+.|++.+.... ..++. +. . +.+.
T Consensus 165 ~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~p 244 (512)
T 1zvo_C 165 TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQ 244 (512)
T ss_pred CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcCCceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCC
Confidence 65 899998432110 00111 00 0 0011
Q ss_pred ---------------------------------------------------------cCCCcceeecCccEEEEEEEeec
Q psy15734 180 ---------------------------------------------------------IPNQLEGAFVSQTVELHCHTEAF 202 (314)
Q Consensus 180 ---------------------------------------------------------~~~~~~~v~~g~~~~l~C~~~g~ 202 (314)
.++....+.+|+.+.|.|.+.|.
T Consensus 245 p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~ 324 (512)
T 1zvo_C 245 PQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGS 324 (512)
T ss_pred CchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEece
Confidence 11122234579999999999997
Q ss_pred CCc--eeEEecCCCeeeecCCc-eeeeEeeC-CeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE-Ee---cC
Q psy15734 203 PAS--LNYWTNEKGDMIITGDD-YEDSRLIN-GYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV-NL---VD 274 (314)
Q Consensus 203 p~p--~~~W~~~~~~~~~~~~~-~~~~~~~~-~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V-~~---~~ 274 (314)
+++ .+.|++++.. +..... .......+ .|...+.|.|..+..+|.|.|+|.|.|..+... ...+.. .. ..
T Consensus 325 ~P~~~~i~W~k~g~~-~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~ 402 (512)
T 1zvo_C 325 DLKDAHLTWEVAGKV-PTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPV 402 (512)
T ss_pred ECCCeEEEEEECCEe-ccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCC
Confidence 443 8899997544 221111 01111123 367778999999999999999999999887653 222222 11 11
Q ss_pred CCeeEEE-EccccccEe-EEEEEeeccCCC--ccce
Q psy15734 275 GDIFQIR-KMSRLHMGA-YLCIASNGVVPS--VSHR 306 (314)
Q Consensus 275 ~~~~~~~-~~~~~~~g~-~~C~a~~~~~~~--~~w~ 306 (314)
.+.+.+. .....+... +.|.|.+++++. +.|.
T Consensus 403 ~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~ 438 (512)
T 1zvo_C 403 KLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWL 438 (512)
T ss_pred CCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEE
Confidence 2333332 222344457 999999987765 5684
No 80
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.91 E-value=2.3e-24 Score=170.89 Aligned_cols=199 Identities=16% Similarity=0.261 Sum_probs=131.2
Q ss_pred CCCCceecCC----cceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCE---EEEeCCceeEEEEE
Q psy15734 19 PDMPRFAEPV----ANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRV---SITFNDHRSWFLHL 91 (314)
Q Consensus 19 ~~~p~~~~~~----~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~i 91 (314)
..+|.|..++ ....+.+|+++.|.|.+.+.+.+.+.|++++ ..+. ...++ .... ..+.|.|
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~-~~~~--------~~~~~~~~~~~~---~~~~L~i 80 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG-KEFK--------QEHRIGGYKVRN---QHWSLIM 80 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETT-EECC--------GGGSTTCCEEEG---GGTEEEE
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECC-cccc--------ccccccceeeec---CcceEEE
Confidence 3457776655 7889999999999999988888899999954 3321 11111 1111 1237999
Q ss_pred eeecCCCCeEEEEEEecC-CCcceeEEEEEEeCCce---eeecCcceeEEecCceEEEEEEecccCCCceEEEcC---CC
Q psy15734 92 RDVQETDRGWYMCQINTV-PMTSQKGYLQVVVPPRI---LLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRE---DG 164 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~---~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~---~~ 164 (314)
.+++.+|+|.|+|.+.+. +.......|.|..++.. .....+....+..|+.+.|.|.+.+.|.|.+.|++. ++
T Consensus 81 ~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g 160 (231)
T 3ojm_B 81 ESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNG 160 (231)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTT
T ss_pred ecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCC
Confidence 999999999999999765 34445667777664321 111123456677888888888888888888888872 22
Q ss_pred ceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecC
Q psy15734 165 KAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~ 244 (314)
..+...+. +... ...... ...... +.|.|.++.
T Consensus 161 ~~~~~~~~--------------------------------~~~~-------~~~~~~---~~~~~~-----~~L~i~~~~ 193 (231)
T 3ojm_B 161 SKYGPDGL--------------------------------PYLK-------VLKHSG---INSSNA-----EVLALFNVT 193 (231)
T ss_dssp BSBCTTSC--------------------------------BCEE-------EEEECS---TTCSCT-----TEEEECSCC
T ss_pred ccccCCCc--------------------------------ceEe-------Eecccc---cccCCc-----cEEEEecCC
Confidence 21110000 0000 000000 000111 289999999
Q ss_pred CCCCeEEEEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 245 SHQFGSYRCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.+|+|.|+|.|.|..|....++.|.|..+|.+
T Consensus 194 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 194 EADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCC--
T ss_pred HHHCeEEEEEEEeccceEeeEEEEEEecCCCC
Confidence 99999999999999999999999999887654
No 81
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.91 E-value=2.7e-23 Score=162.63 Aligned_cols=195 Identities=14% Similarity=0.175 Sum_probs=114.2
Q ss_pred EEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCCC
Q psy15734 33 ATVGKEALMACVVENL-REYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVPM 111 (314)
Q Consensus 33 v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 111 (314)
...++.+.|.|.+.+. +.+.+.|++++ ..+ ..+.++.+...+. ...|.|.+++.+|+|.|+|.+.+..
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~g-~~i--------~~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~~~n~~- 82 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHNG-SAI--------RYSDRVKTGVTGE-QIWLQINEPTPNDKGKYVMELFDGK- 82 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEETT-EEC--------CCCSSEEEEEETT-EEEEEEESCCGGGCEEEEEEEECSS-
T ss_pred EEcCceEEEEEEEeccCCCceEEEEECC-EEc--------cCCCeEEEEEeCC-EEEEEECCCCcccCEEEEEEEecCC-
Confidence 3467888999998774 57899999954 332 2334555544332 3379999999999999999997642
Q ss_pred cceeEEEEEEeCC--ceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEcCCCcceeec
Q psy15734 112 TSQKGYLQVVVPP--RILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAFV 189 (314)
Q Consensus 112 ~~~~~~l~v~~~p--~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~ 189 (314)
......+.+.+.. ...... .. . ... .....+.|.+ +...+....+.+
T Consensus 83 ~~~~~~~~l~v~~~~~~~~~~--~~--~-~~~------~~~~~~~p~~--------------------~~~~~~~~~v~~ 131 (212)
T 2r15_A 83 TGHQKTVDLSGQAYDEAYAEF--QR--L-KQA------AIAEKNRARV--------------------LGGLPDVVTIQE 131 (212)
T ss_dssp CEEEEEEEECHHHHHHHHHHH--HH--H-HHH------HHHHHHSCEE--------------------EEBCCSEEEEET
T ss_pred cceEEEEEEEEeeccchhhhc--cc--c-Ccc------cccccCCCcc--------------------cccCCCcEEEcc
Confidence 2222333332110 000000 00 0 000 0000001111 111122234555
Q ss_pred CccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEE
Q psy15734 190 SQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVY 269 (314)
Q Consensus 190 g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 269 (314)
|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+....+. .+.|.|.++..+|+|.|+|.|.|..|.....+.|.
T Consensus 132 g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 207 (212)
T 2r15_A 132 GKALNLTCNVWGDPPPEVSWLKN-EKALAQTDHCNLKFEAGR---TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 207 (212)
T ss_dssp TCCEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEETTT---EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCeEEEEEEEcCCCCceEEEEEC-CeECccCCCEEEEEcCCC---EEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEE
Confidence 66666666666666666666664 444444444444333222 35999999999999999999999999999999988
Q ss_pred EEec
Q psy15734 270 VNLV 273 (314)
Q Consensus 270 V~~~ 273 (314)
|..+
T Consensus 208 V~~P 211 (212)
T 2r15_A 208 VFIP 211 (212)
T ss_dssp EECC
T ss_pred EEcc
Confidence 8754
No 82
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.91 E-value=1e-22 Score=160.57 Aligned_cols=194 Identities=19% Similarity=0.253 Sum_probs=121.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC-----ceEEEEEEcCceeEEEeee-ee------eecCcCEEEEeC--CceeEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR-----EYKVAWVKMITQTILSIHH-KV------VTQNKRVSITFN--DHRSWFL 89 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~v~W~~~~~~~~~~~~~-~~------~~~~~~~~~~~~--~~~~~~L 89 (314)
+..++..+.+.+|+++.|.|.+.+.+ ...+.|++++ ..+..... .. ....+|..+..+ .....+|
T Consensus 4 v~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 82 (222)
T 3sbw_C 4 VTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMED-KNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAAL 82 (222)
T ss_dssp CBCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETT-EEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEE
T ss_pred EecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECC-cEEEEEeCCccccccccccccCceEEccccccCCEEEE
Confidence 34567788999999999999986554 4589999965 32221111 10 011245555432 2234589
Q ss_pred EEeeecCCCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec
Q psy15734 90 HLRDVQETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY 169 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~ 169 (314)
.|.+++.+|+|.|+|.+.+.+.....+.|.|..++...... ....+..|+.+.|.|.+.|+|.|.+.|++.++..+
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~--~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~-- 158 (222)
T 3sbw_C 83 QITDVKLQDAGVYRCMISYGGADYKRITVKVNAPYNKINQR--ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVL-- 158 (222)
T ss_dssp EESSCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCCCEEE--EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEE--
T ss_pred EEcCcccccCeEEEEEEEeCCCceeEEEEEEECCCCCCCce--eeeeecCCCcEEEEEEecCCCCCeEEEEECCCcee--
Confidence 99999999999999999875555666778887766543221 11245567777777777777777777777323221
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeC-CeeeEEEEEEeecCCCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLIN-GYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~d~ 248 (314)
............+ .+...+.|.| ..+|.
T Consensus 159 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~l~v---~~~d~ 187 (222)
T 3sbw_C 159 ------------------------------------------------SGKTTTTNSKREEKLFNVTSTLRI---NTTTN 187 (222)
T ss_dssp ------------------------------------------------CCEEEEEECC----CEEEEEEEEE---ECCTT
T ss_pred ------------------------------------------------cCccceEEEcCCCCCEEEEEEEEE---eccCC
Confidence 1111110111111 1222234444 46899
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|+|.|.|..|.....+.|.|...
T Consensus 188 g~Y~C~a~n~~g~~~~~~~l~v~~~ 212 (222)
T 3sbw_C 188 EIFYCTFRRLDPEENHTAELVIPEL 212 (222)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCCC
T ss_pred cEEEEEEEeCccceeeEEEEEecCC
Confidence 9999999999999999988887644
No 83
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.91 E-value=5.5e-23 Score=173.01 Aligned_cols=233 Identities=15% Similarity=0.197 Sum_probs=146.9
Q ss_pred cCCcceEEEcCCcEEEEEEecCC--CceEEEEEEcC-ceeEEEeee-------e--eeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENL--REYKVAWVKMI-TQTILSIHH-------K--VVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~-~~~~~~~~~-------~--~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+. +.+.+.|+|++ +..+..... . ......|+.+..+. ...++|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (344)
T 1za6_B 5 VQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELS 84 (344)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred eCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEEC
Confidence 34556889999999999999875 36789999963 222211000 0 01124577776542 345689999
Q ss_pred eecCCCCeEEEEEEecCC-CcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCc
Q psy15734 93 DVQETDRGWYMCQINTVP-MTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGK 165 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~ 165 (314)
+++.+|+|.|+|.+.+.. .......|.|.. +|.+.... ....+.+|+.+.|.|.+.|. |. +.+.|++ ++.
T Consensus 85 ~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~ 161 (344)
T 1za6_B 85 SLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSWNS-GAL 161 (344)
T ss_dssp SCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEEC--CSCTTTSSSEEEEEEEEEEEBSSCCCEEETT-TTB
T ss_pred CCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEcc--ccccccCCCcEEEEEEEeeEECCCeEEEEec-CCc
Confidence 999999999999997642 223445677763 44444332 12235689999999999987 65 7999998 443
Q ss_pred ee---------ecCCee--------------------------------------------------------------C
Q psy15734 166 AI---------NYNGEL--------------------------------------------------------------V 174 (314)
Q Consensus 166 ~~---------~~~~~~--------------------------------------------------------------~ 174 (314)
.+ ..++.. .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~ 241 (344)
T 1za6_B 162 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPR 241 (344)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHHHBCEEEEEEEGGGTEEEEEEECCCCC--------------------CCB
T ss_pred cCceeECCCeECCCCCEEEEEEEEEcHHHcCCCcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCc
Confidence 21 011100 0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCC--ceeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPA--SLNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y 251 (314)
+|.+.+.+.......|..+.|.|.+.|.++ +.+.|++++.. +............++ |...+.|.|.....+|+|.|
T Consensus 242 ~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~-~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~Y 320 (344)
T 1za6_B 242 EPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQP-ENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVF 320 (344)
T ss_dssp CCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSC-CCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEE
T ss_pred CCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeE-CCCcEecceEECCCCcEEEEEEEEEChHHccCCCeE
Confidence 122221111111234677999999999643 58899997543 322212222223333 56667888888888899999
Q ss_pred EEEEeeCCCCc
Q psy15734 252 RCVAVNALGET 262 (314)
Q Consensus 252 ~C~a~n~~g~~ 262 (314)
+|.|.|.....
T Consensus 321 tC~a~~~~l~~ 331 (344)
T 1za6_B 321 SCSVMHEALHN 331 (344)
T ss_dssp EEEEECTTSTT
T ss_pred EEEEEcCCCCC
Confidence 99999976543
No 84
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.91 E-value=3e-24 Score=199.32 Aligned_cols=271 Identities=16% Similarity=0.120 Sum_probs=93.6
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEe--CCceeEEEEEeeecCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITF--NDHRSWFLHLRDVQET 97 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~ 97 (314)
.+|.+...+....+..|++++|.|.+.+ .+.|++..... ....++.+.. ++.....|.|.+++.+
T Consensus 30 ~~p~l~~~~~~~~v~~G~~vtL~C~~~~----~v~W~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~I~~~~~~ 96 (772)
T 3v2a_R 30 DLPRLSIQKDILTIKANTTLQITCRGQR----DLDWLWPNNQS---------GSEQRVEVTECSDGLFCKTLTIPKVIGN 96 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEECCCCCeEEEcCCCCEEEEEeccC----CeeeeCCCCCC---------ccCCceeEEEcCCCcEEEEEEECCCcHh
Confidence 4555555566788999999999998763 67898754321 0111222211 1111237999999999
Q ss_pred CCeEEEEEEecCCCcceeEEEEEEeC--Cceee-ecCcceeEEecC--ceEEEEEEecccCCCceEEEcCC-CceeecCC
Q psy15734 98 DRGWYMCQINTVPMTSQKGYLQVVVP--PRILL-DRTSTDVVVREG--TEVTLECSAVGYPEPYVAWRRED-GKAINYNG 171 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~~~~~~l~v~~~--p~~~~-~~~~~~~~~~~g--~~~~l~C~~~~~p~p~~~W~~~~-~~~~~~~~ 171 (314)
|+|.|+|.+. ....+..+.|.|..+ |.+.. ...+....+.+| +.+.|.|.+.+ |.+.+.|++.. +..+...+
T Consensus 97 d~G~Y~C~~~-~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~ 174 (772)
T 3v2a_R 97 DTGAYKCFYR-ETDLASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDG 174 (772)
T ss_dssp ------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCS
T ss_pred hCEeEEEEEc-CCCEEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCC
Confidence 9999999986 223334445555432 22221 112345667889 89999999976 77899999830 33222211
Q ss_pred ee---------C------------------------------------CCeEEc-CCCcceeecCccEEEEEEEee--cC
Q psy15734 172 EL---------V------------------------------------PPMLTI-PNQLEGAFVSQTVELHCHTEA--FP 203 (314)
Q Consensus 172 ~~---------~------------------------------------~p~~~~-~~~~~~v~~g~~~~l~C~~~g--~p 203 (314)
.. . ++.+.+ ++....+.+|+++.|.|.+.+ .|
T Consensus 175 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 254 (772)
T 3v2a_R 175 NRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNV 254 (772)
T ss_dssp SSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEEEEEECTTC
T ss_pred ceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEEEEecCCCC
Confidence 10 0 122222 334467899999999999998 45
Q ss_pred CceeEEecCCCeeeecCCceeee-Eee---CCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeE
Q psy15734 204 ASLNYWTNEKGDMIITGDDYEDS-RLI---NGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQ 279 (314)
Q Consensus 204 ~p~~~W~~~~~~~~~~~~~~~~~-~~~---~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~ 279 (314)
.+.+.|++++.... ........ ... ......+.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|...+.
T Consensus 255 ~~~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~ 333 (772)
T 3v2a_R 255 GIDFNWEYPSSKHQ-HKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFG 333 (772)
T ss_dssp CCEEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC----
T ss_pred ceeEEEecCCccCC-CceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEec
Confidence 67899999754322 11111100 000 22334569999999999999999999999998888888988876533222
Q ss_pred E-----EEccccccEeEEEEEeeccCCCccce
Q psy15734 280 I-----RKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 280 ~-----~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
. ..+..++...+.|.+.+.|.+.+.|.
T Consensus 334 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~ 365 (772)
T 3v2a_R 334 SGMESLVEATVGERVRIPAKYLGYPPPEIKWY 365 (772)
T ss_dssp --------------------------------
T ss_pred cCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEE
Confidence 1 12333444469999999999999996
No 85
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.91 E-value=5.2e-24 Score=166.78 Aligned_cols=190 Identities=18% Similarity=0.316 Sum_probs=126.6
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC----ceEEEEEEcCce------e-EEEeeeeeee-----cCcCEEEEeC--Cce
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR----EYKVAWVKMITQ------T-ILSIHHKVVT-----QNKRVSITFN--DHR 85 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~----~~~v~W~~~~~~------~-~~~~~~~~~~-----~~~~~~~~~~--~~~ 85 (314)
+..++..+.+.+|+++.|.|.+.+.+ .+.+.|++.+.. . +......... ..+|+.+..+ ...
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 82 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSG 82 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGT
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCC
Confidence 34566788999999999999998765 469999985321 1 1111111111 1446655431 112
Q ss_pred eEEEEEeeecCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCC
Q psy15734 86 SWFLHLRDVQETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRRED 163 (314)
Q Consensus 86 ~~~L~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~ 163 (314)
.++|.|.+++.+|+|.|+|.+.+. +.....+.|.|..+|.+.... ....+..|+.+.|.|.+ .+.|.|.+.|++.+
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCF--VDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEE--EESCCBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceee--eecceecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 357999999999999999999765 344666778888887765432 22235677778888877 67777777777732
Q ss_pred CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeec
Q psy15734 164 GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
+ ......... ....++ .|.|.++
T Consensus 161 ~--------------------------------------------------~~~~~~~~~--~~~~~~-----~L~i~~~ 183 (214)
T 3jz7_A 161 D--------------------------------------------------SQTMPTPWL--AEMTSP-----VISVKNA 183 (214)
T ss_dssp T--------------------------------------------------TCCCCGGGG--GGTTSS-----EEEECSC
T ss_pred C--------------------------------------------------CCccCccce--eccCCC-----EEEEecC
Confidence 1 111111000 001222 9999999
Q ss_pred CCCCCeEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 244 LSHQFGSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
..+|+|.|+|.|.|..|....++.|.|..
T Consensus 184 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 184 SSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred CHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 99999999999999999999998888763
No 86
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.91 E-value=7.4e-23 Score=158.99 Aligned_cols=183 Identities=18% Similarity=0.184 Sum_probs=113.8
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCCc-----eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCC--ceeEEEEEeeec
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLRE-----YKVAWVKMITQTILSIHHKVVTQNKRVSITFND--HRSWFLHLRDVQ 95 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~ 95 (314)
.+..++..+.+.+|+++.|.|.+.+.+. +.+.|++.+... .....++.+..+. ...++|.|.+++
T Consensus 4 ~v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~--------~~~~~r~~~~~~~~~~~~~~L~I~~v~ 75 (202)
T 3bp6_B 4 TVTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDT--------SLQSERATLLEEQLPLGKALFHIPSVQ 75 (202)
T ss_dssp CEECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--C--------CCBCSSCEECGGGGGGTEEEEEECSCC
T ss_pred EEecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcc--------cccCCceEEeeccccCCeeEEEECCCC
Confidence 3456777899999999999999988765 899999943322 1223344443321 123589999999
Q ss_pred CCCCeEEEEEEecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC
Q psy15734 96 ETDRGWYMCQINTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV 174 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~ 174 (314)
.+|+|.|+|.+.+.. .....+.|.|..++..... ....+.+|+.+.|.|.+.|+|.|.+.|++
T Consensus 76 ~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~---~~~~~~~g~~v~l~C~~~g~P~p~v~W~~------------- 139 (202)
T 3bp6_B 76 VRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDT---RILEVPGTGEVQLTCQARGYPLAEVSWQN------------- 139 (202)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEE---EEEECTTTCCEEEEEEEEEBSCCEEEETT-------------
T ss_pred HHHCcEEEEEEEeCCCcceEEEEEEecCCCCcccE---EEEecCCCCeEEEEEEccccCCceEEEEe-------------
Confidence 999999999997653 2455566777655422111 01123345555555555555555555554
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+++.... ......++ ....+.|.++..+|+|.|+|.
T Consensus 140 -------------------------------------~~~~~~~-----~~~~~~~~--~~~~~~i~~v~~~d~G~Y~C~ 175 (202)
T 3bp6_B 140 -------------------------------------VSVPANT-----SHIRTPEG--LYQVTSVLRLKPQPSRNFSCM 175 (202)
T ss_dssp -------------------------------------CCSCCEE-----EEEECTTS--CEEEEEEEEECCCTTCCEEEE
T ss_pred -------------------------------------CCCCccC-----ceeeCCCC--CEEEEEEEEEEcCCCCEEEEE
Confidence 3222110 00011111 123677889999999999999
Q ss_pred EeeCCCCceeEEEEEEEec
Q psy15734 255 AVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|..|.....+.|.|...
T Consensus 176 a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 176 FWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEETTTTEEEEEEECC---
T ss_pred EEcCCcccccEEEEEecCc
Confidence 9999999998888877544
No 87
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=1.5e-23 Score=164.69 Aligned_cols=196 Identities=22% Similarity=0.374 Sum_probs=128.0
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEe-CCceeEEEEEeeecC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITF-NDHRSWFLHLRDVQE 96 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~i~~~~~ 96 (314)
...+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+... ......+.. ++.....|.|.+++.
T Consensus 6 ~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g-~~~~~~------~~~~~~~~~~~~~~~~~l~i~~v~~ 78 (217)
T 2vr9_A 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDG-EPVSTN------EKKSHRVQFKDGALFFYRTMQGKKE 78 (217)
T ss_dssp CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETT-EECCCS------SSSSSEEECTTSCEEESSCCBSSSC
T ss_pred ccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECC-cCccCC------CccceeEEecCCceEEEEEeccCCc
Confidence 357899999999999999999999999998888899999954 332211 011111111 111112347889999
Q ss_pred CCCeEEEEEEecCCCc--ceeEEEEEEe-CCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCCe
Q psy15734 97 TDRGWYMCQINTVPMT--SQKGYLQVVV-PPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNGE 172 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~--~~~~~l~v~~-~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~~ 172 (314)
+|+|.|+|.+.+.... +....|.|.. +|.+... +....+..|+.+.|.|.+ .+.|.|.+.|++ ++..+.....
T Consensus 79 ~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~--~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~~~~~ 155 (217)
T 2vr9_A 79 QDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVE--PKDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLDDLKA 155 (217)
T ss_dssp BCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBC--CCCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEECCCCC
T ss_pred ccCceEEEEEecCCCccccccceEEEEEeCCCcEEC--CCccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCCcccc
Confidence 9999999999765322 2345566654 3443332 345567788888888887 777888888888 4433210000
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
.......+ .....++ .|.|.++..+|+|.|+
T Consensus 156 ------------------------------------------~~~~~~~~--~~~~~~~-----~L~i~~~~~~d~G~Y~ 186 (217)
T 2vr9_A 156 ------------------------------------------MSFGASSR--VRIVDGG-----NLLISNVEPIDEGNYK 186 (217)
T ss_dssp ------------------------------------------C---CCCS--EEEETTT-----EEEESSCCSTTCEEEE
T ss_pred ------------------------------------------cccccCCc--EEecCCC-----cEEEeeCCHHHCeEEE
Confidence 00000111 1112333 8999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEEe
Q psy15734 253 CVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~~ 272 (314)
|.|.|..|....+..+.+..
T Consensus 187 C~a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 187 CIAQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EEEEETTEEEECCCEEEEEC
T ss_pred EEEEcccceeccccEEEEEE
Confidence 99999999887766554443
No 88
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.91 E-value=2.8e-23 Score=161.58 Aligned_cols=171 Identities=15% Similarity=0.104 Sum_probs=120.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceE-EEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYK-VAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
...|.+...+....+.+|+++.|.|.+.+.+.+. +.|++++ ..+. ... ..|.|.+++.+
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g-~~l~--------~~~-----------~~L~i~~v~~~ 64 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNE-SLIS--------SQA-----------SSYFIDAATVD 64 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETT-EEES--------CCS-----------SEEEESSCCGG
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECC-EEcc--------cCc-----------cEEEEeccccc
Confidence 3567777778778999999999999998876654 9999954 3221 111 27999999999
Q ss_pred CCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CCCceEEEcCCCceeecCCeeCCC
Q psy15734 98 DRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEPYVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~~~W~~~~~~~~~~~~~~~~p 176 (314)
|+|.|+|.+.+ +..+..+.|.|..+|.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|++ ++.
T Consensus 65 D~G~Y~C~a~n-~~~s~~~~l~V~~~p~~~~~~---~~~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~----------- 128 (204)
T 3sgj_C 65 DSGEYRCQTQL-STLSDPVQLEVHIGWLLLQAP---RWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NGK----------- 128 (204)
T ss_dssp GCEEEEEEETT-SBCCCCEEEEEECSSEEEECS---CSEEETTCCEEEEEEEGGGCCCEEEEEEE-TTE-----------
T ss_pred CCEEEEEEeCC-CcccccEEEEEecCceEecCC---ceeEeCCCcEEEEEEecCCCCCceEEEEE-CCc-----------
Confidence 99999999965 445556778887776554432 2456678888888887654 456777777 322
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
.+.. ...+. .|.|.++..+|+|.|+|.|.
T Consensus 129 ---------------------------------------~~~~-------~~~~~-----~L~i~~v~~~D~G~Y~C~a~ 157 (204)
T 3sgj_C 129 ---------------------------------------GRKY-------FHHNS-----DFYIPKATLKDSGSYFCRGL 157 (204)
T ss_dssp ---------------------------------------EEEE-------EEECC-----CEEESSCCGGGCEEEEEEEE
T ss_pred ---------------------------------------Eeec-------ccCCc-----eEEECcCCcccCEEEEEEEE
Confidence 1110 01122 89999999999999999999
Q ss_pred e-CCCCceeEEEEEEEecCCC
Q psy15734 257 N-ALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 257 n-~~g~~~~~~~l~V~~~~~~ 276 (314)
| ..+..+..+.|.|..++..
T Consensus 158 n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 158 VGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp ETTEEEECCCEEEEEEC----
T ss_pred eCCCceecCcEEEEEeCcCCC
Confidence 9 4455677888888876544
No 89
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.91 E-value=2.7e-23 Score=180.56 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=146.8
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecC-CCce-EEEEEEcCceeEEEe--e-eee-eecCcCEEEEeCCceeEEEEEeee
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVEN-LREY-KVAWVKMITQTILSI--H-HKV-VTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~-~v~W~~~~~~~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
+|.+...+....+.+|+.+.|.|.+.+ .|.+ .+.|+++ +..+... . ... ...+..+.. ...|.|.++
T Consensus 116 ~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~L~i~~~ 188 (438)
T 1qgc_4 116 APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKID-GSERQNGVLNSWTDQDSKDSTYSM------SSTLTLTKD 188 (438)
T ss_dssp CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEET-TEEECTTEEEEEECCCTTTCCEEE------EEEEEEEHH
T ss_pred CCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEEC-CEEcCCCceeccccccCCCCcEEE------EEEEEEeCc
Confidence 565554322222346889999999977 5655 8999994 4433211 0 000 111222222 237999999
Q ss_pred cCCCCeEEEEEEecCCCcceeEEEEEEeC-CceeeecCcceeEEecCceEEEEEEecccC--CCceEEEcCC-Cceeec-
Q psy15734 95 QETDRGWYMCQINTVPMTSQKGYLQVVVP-PRILLDRTSTDVVVREGTEVTLECSAVGYP--EPYVAWRRED-GKAINY- 169 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~-p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~W~~~~-~~~~~~- 169 (314)
+.+|+|.|+|.+.+..... ...+.+... +...... +....+.+|+.+.|.|.+.+.| .+.+.|++.+ +..+..
T Consensus 189 ~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~ 266 (438)
T 1qgc_4 189 EYERHNSYTCEATHKTSTS-PIVKSFNRNECEVMLVE-SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWV 266 (438)
T ss_dssp HHHTCCEEEEEEEETTCSS-CEEEEEETTC-CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEE
T ss_pred ccCCCCeEEEEEEecccCC-ceecccccccceeEEec-CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEE
Confidence 9999999999998754332 233333321 1111111 3456789999999999999987 6799999841 221100
Q ss_pred ----------------CC-------------eeC------------------------------------------CCeE
Q psy15734 170 ----------------NG-------------ELV------------------------------------------PPML 178 (314)
Q Consensus 170 ----------------~~-------------~~~------------------------------------------~p~~ 178 (314)
.+ .+. +|.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v 346 (438)
T 1qgc_4 267 ATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSV 346 (438)
T ss_dssp EEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEE
T ss_pred EEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeE
Confidence 00 000 2332
Q ss_pred EcCCCcceeecCccEEEEEEEeec-CCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 179 TIPNQLEGAFVSQTVELHCHTEAF-PAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 179 ~~~~~~~~v~~g~~~~l~C~~~g~-p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
...+....+..|+++.|.|.+.|. |.| .+.|++++..+... ........+.|...+.|.|.++..+| |.|+|.|.
T Consensus 347 ~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~--~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~ 423 (438)
T 1qgc_4 347 YPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH--TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVA 423 (438)
T ss_dssp EEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEE--ECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEE
T ss_pred EEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCcee--ecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEE
Confidence 222223346689999999999997 888 99999975432211 11111122336667799999999999 99999999
Q ss_pred eCCCCceeEEEE
Q psy15734 257 NALGETDGFIKV 268 (314)
Q Consensus 257 n~~g~~~~~~~l 268 (314)
|..|.......|
T Consensus 424 n~~g~~~~~~~i 435 (438)
T 1qgc_4 424 HPASSTKVDKKI 435 (438)
T ss_dssp EGGGTEEEEEEC
T ss_pred eCCCCcceeeec
Confidence 999876655544
No 90
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.91 E-value=2e-22 Score=159.39 Aligned_cols=192 Identities=19% Similarity=0.265 Sum_probs=114.5
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCc---eEEEEEEcCceeEEEeee--eee------ecCcCEEEEeCC--ceeEEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLRE---YKVAWVKMITQTILSIHH--KVV------TQNKRVSITFND--HRSWFLH 90 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~--~~~~~L~ 90 (314)
++.|.+.+.+.+|++++|.|.+.+.+. ..|.|+|++......... ... ....|+...... ...++|.
T Consensus 7 V~~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 86 (226)
T 4f80_A 7 VLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALR 86 (226)
T ss_dssp EECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEE
T ss_pred EECCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEE
Confidence 345667799999999999999976433 479999976543322111 111 112344444332 2346899
Q ss_pred EeeecCCCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecc-cCCCceEEEcCCCceeec
Q psy15734 91 LRDVQETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVG-YPEPYVAWRREDGKAINY 169 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~~~W~~~~~~~~~~ 169 (314)
|.+++.+|+|.|+|.+.+.. ......+.+..++..... .....+.+|+.+.|.|.+.+ .|.|.+.|++.++..
T Consensus 87 I~~v~~~D~G~Y~C~a~n~~-~~~~~~v~~~~~~~~~~~--~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~--- 160 (226)
T 4f80_A 87 IHNVTASDSGKYLCYFQDGD-FYEKALVELKVAALGSDL--HVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGEN--- 160 (226)
T ss_dssp ESSCCGGGCEEEEEEEEETT-EEEEEEEEEEEEBCCCCC--EEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCB---
T ss_pred EeeCchHHCeeEEEEEECCC-cEEEEEEEEeeccceecc--cceeeeccCCceeeEEEeccCCCCCEEEEEECCceE---
Confidence 99999999999999997642 233334444433322211 23445667788888888776 477777777743222
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
+... ........++. ...+.+.+++.+|+|
T Consensus 161 -----------------------------------------------~~~~-~~~~~~~~~g~--~~v~s~l~v~~~d~G 190 (226)
T 4f80_A 161 -----------------------------------------------IPTV-EAPVVADGVGL--YAVAASVIMRGSSGE 190 (226)
T ss_dssp -----------------------------------------------CCCE-ECCCEECTTSC--EEEEEEEEECC----
T ss_pred -----------------------------------------------cCCC-ceEEEECCCCc--EEEEEEEEechhcCc
Confidence 1111 11111112220 114445567789999
Q ss_pred EEEEEEeeCCCCceeEEEEEEE
Q psy15734 250 SYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.|+|.|.|..|..++++.|.|.
T Consensus 191 ~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 191 GVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CEEEEEEETTTTEEEEEEECCC
T ss_pred EEEEEEEeCCCCeEEEEEEEEC
Confidence 9999999999999998888774
No 91
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.91 E-value=3.8e-23 Score=162.01 Aligned_cols=190 Identities=17% Similarity=0.255 Sum_probs=120.7
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC--cee-EEEe-ee-eeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI--TQT-ILSI-HH-KVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~--~~~-~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
|.+..++ .+.+.+|++++|.|.+.+.+.+.+.|++.. ... .... .. .......|+.+.. ....++|.|.+++.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v~~ 79 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SGNMATLTISKAQA 79 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ETTEEEEEESSCCG
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cCCEEEEEECCCCh
Confidence 4566667 899999999999999998888999999942 111 1110 00 0011234666554 23345899999999
Q ss_pred CCCeEEEEEEecCCC----cceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCce
Q psy15734 97 TDRGWYMCQINTVPM----TSQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKA 166 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~----~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~ 166 (314)
+|+|.|+|.+.+... ......|.|. .+|.+...+ ....+.+|+.+.|.|.+.+. |+ +.+.|++ ++..
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~ 156 (213)
T 3mj8_L 80 GDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFP--PSSEELKTNQATLVCMINGFYPADVAVTWEA-DGTP 156 (213)
T ss_dssp GGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred hhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccC--CCcccccCCcEEEEEEeeceeCCCeEEEEEc-CCcc
Confidence 999999999976543 2445667777 455554432 12223367777777777764 33 2677776 4433
Q ss_pred eecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eeeEeeCCeeeEEEEEEeecCC
Q psy15734 167 INYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDSRLINGYSCHMTLKIRSILS 245 (314)
Q Consensus 167 ~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~s~L~i~~~~~ 245 (314)
+. ..... ......+.+...+.|.|.++..
T Consensus 157 l~--------------------------------------------------~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 186 (213)
T 3mj8_L 157 IT--------------------------------------------------QGVKTTQPSKSDSKYMATSYLTMTADAW 186 (213)
T ss_dssp EC--------------------------------------------------TTEEECCCEEETTEEEEEEEEEEESHHH
T ss_pred cC--------------------------------------------------CCcccCCcCccCCcEEEEEEEEEeHHHc
Confidence 21 11000 0011112244456899999999
Q ss_pred CCCeEEEEEEeeCCCCceeEE
Q psy15734 246 HQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
+|+|.|+|.|.|..+....++
T Consensus 187 ~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 187 KSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp HSCSCEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEEEEECCccEEeee
Confidence 999999999999986655554
No 92
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.91 E-value=8.6e-23 Score=160.62 Aligned_cols=186 Identities=16% Similarity=0.244 Sum_probs=125.8
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
....++|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. + ... ..+.|.|.+++.+
T Consensus 15 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~-~--------~~~----------~~~~L~i~~v~~~ 75 (218)
T 3k0w_A 15 VPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKE-I--------PNG----------NTSELIFNAVHVK 75 (218)
T ss_dssp ----CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEE-C--------TTC----------CSSEEEETTCCGG
T ss_pred cCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEE-C--------CCC----------CCCEEEEccCChh
Confidence 34678899999999999999999999999988899999995432 1 111 1127999999999
Q ss_pred CCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCC
Q psy15734 98 DRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~ 175 (314)
|+|.|+|.+.+.... +..+.|.|...+....... .+.+.. +
T Consensus 76 d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~------------------~~~~~~-------------------~ 118 (218)
T 3k0w_A 76 DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSV------------------DGVSES-------------------K 118 (218)
T ss_dssp GCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTC------------------CSBCCS-------------------S
T ss_pred hCeEeEEEEEcCCCCceeeEEEEEEEccCccccccc------------------ccccCC-------------------C
Confidence 999999999765322 4446677766542211000 000000 1
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+.... .. .|.|.++..+|+|.|+|.|
T Consensus 119 p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~-~~~~~~~--------~~-----~L~i~~v~~~d~G~Y~C~a 184 (218)
T 3k0w_A 119 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE-LPLTHET--------KK-----LYMVPYVDLEHQGTYWCHV 184 (218)
T ss_dssp CEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETT-EECTTCC--------SS-----EEEESSCCGGGCEEEEEEE
T ss_pred ceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECC-EECCCCC--------CC-----EEEEeecChhcCEEEEEEE
Confidence 12222333345667888888888888888888888753 3232221 12 8999999999999999999
Q ss_pred eeCCCC-ceeEEEEEEEec
Q psy15734 256 VNALGE-TDGFIKVYVNLV 273 (314)
Q Consensus 256 ~n~~g~-~~~~~~l~V~~~ 273 (314)
.|..|. .+..+.|.|...
T Consensus 185 ~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 185 YNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp ECSSCEEECCCEEEEECC-
T ss_pred EcCCCCceeeeEEEEEeCC
Confidence 998887 567777777654
No 93
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.90 E-value=1.2e-22 Score=159.23 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=112.9
Q ss_pred CCcceEEEcC--CcEEEEEEecCCCceEEEEEEc--CceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEE
Q psy15734 27 PVANVTATVG--KEALMACVVENLREYKVAWVKM--ITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWY 102 (314)
Q Consensus 27 ~~~~~~v~~g--~~~~l~C~~~~~~~~~v~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 102 (314)
.+..+.+.+| +++.|.|.+.+ +.+.+.|++. ++..+ ..+.++..... ..|.|.+++.+|+|.|
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~--------~~~~~~~~~~~----~~l~I~~v~~~D~G~Y 79 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFV--------PDGNRISWDSK----KGFTIPSYMISYAGMV 79 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEEC--------CCSSSCEEETT----TEEEEEGGGTTTCSEE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccc--------cCCCcccccCC----ccEEEccCChhcCceE
Confidence 3578999999 99999999976 6689999985 34322 11223322211 1699999999999999
Q ss_pred EEEEecCCCcce--eEEEEEEe--CCceeeecCcceeEEecCceEEEEEEecccC--CCceEEEcCCCceeecCCeeCCC
Q psy15734 103 MCQINTVPMTSQ--KGYLQVVV--PPRILLDRTSTDVVVREGTEVTLECSAVGYP--EPYVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 103 ~C~~~~~~~~~~--~~~l~v~~--~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~W~~~~~~~~~~~~~~~~p 176 (314)
+|.+.+.+.... .+.|.|.. +|.+...+ +....+.+|+.++|.|.+.+.| .+.+.|++ ++..+.
T Consensus 80 ~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g~~~~-------- 149 (213)
T 2x1w_L 80 FCEAKINDESYQSIMYIVVVVGYRIYDVVLSP-SHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSKHQ-------- 149 (213)
T ss_dssp EEEEC----CEECCCEEEEECBCCEEEEEEES-CSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SCSSCC--------
T ss_pred EEEEEECCeeEEEEEEEEEEeCCcccceEEcC-CCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cCCccc--------
Confidence 999976433322 24555533 12222222 2333566777777777777643 23567766 222110
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
..... ........ ....+...++|.|.+++.+|+|.|+|.|.
T Consensus 150 -----------------------------~~~~~----~~~~~~~~-----~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 191 (213)
T 2x1w_L 150 -----------------------------HKKLV----NRDLKTQS-----GSEMKKFLSTLTIDGVTRSDQGLYTCAAS 191 (213)
T ss_dssp -----------------------------SEEEE----EEEECCCS-----SCSCEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred -----------------------------eEEEe----cccccccc-----CccceeeeEEEEECCCCcccCEEEEEEEe
Confidence 00000 00000000 00001223489999999999999999999
Q ss_pred eCCCCceeEEEEEEEecC
Q psy15734 257 NALGETDGFIKVYVNLVD 274 (314)
Q Consensus 257 n~~g~~~~~~~l~V~~~~ 274 (314)
|..|.....+.|.|..+|
T Consensus 192 N~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 192 SGLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp CSSCEEEEEEEEEEEC--
T ss_pred cCCCcEEEEEEEEEeccc
Confidence 999999999999987653
No 94
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.90 E-value=4.8e-24 Score=166.41 Aligned_cols=196 Identities=18% Similarity=0.261 Sum_probs=132.1
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeee---eeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHK---VVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
++.|..++..+.+.+|+++.|.|.+.+.+.+.+.|++++.......... ......++.+.. +.|.|.+++.+
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-----~~L~i~~~~~~ 78 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP-----TGITFKSVTRE 78 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET-----TEEECSCCCTT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec-----cEEEEeeCCHH
Confidence 4566778888999999999999999988889999999654421111000 011233554433 37999999999
Q ss_pred CCeEEEEEEecCC---CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCCee
Q psy15734 98 DRGWYMCQINTVP---MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNGEL 173 (314)
Q Consensus 98 d~G~Y~C~~~~~~---~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~~~ 173 (314)
|+|.|+|.+.+.. ..+..+.|.|..+|.+.... ....+..|+.+.|.|.+ .+.|.|.+.|++ ++..+......
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~ 155 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVN--IPSSATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPTNPKS 155 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCC--CBSEEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCSCSSS
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcc--cccceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCCcccc
Confidence 9999999997642 33456678888888765543 23457789999999986 788888999998 44433211100
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
........+... ... +.|.|.++..+|+|.|+|
T Consensus 156 -----------------------------------------~~~~~~~~~~~~-~~~-----~~L~i~~~~~~d~G~Y~C 188 (209)
T 1nbq_A 156 -----------------------------------------TRAFSNSSYVLN-PTT-----GELVFDPLSASDTGEYSC 188 (209)
T ss_dssp -----------------------------------------SSSCTTCCCCCC-TTT-----CCEEESSCCGGGCCCEEE
T ss_pred -----------------------------------------ceeeeccceEEc-CCc-----ceEEEEeccccCCeEEEE
Confidence 000000111110 011 289999999999999999
Q ss_pred EEeeCCCCc--eeEEEEEEE
Q psy15734 254 VAVNALGET--DGFIKVYVN 271 (314)
Q Consensus 254 ~a~n~~g~~--~~~~~l~V~ 271 (314)
.|.|..|.. +..+.|.|.
T Consensus 189 ~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 189 EARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp EEECSSSCCEECCCBCCEEE
T ss_pred EEeCCcCcccccccEEEEEe
Confidence 999999988 444555543
No 95
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.90 E-value=5.7e-23 Score=157.24 Aligned_cols=173 Identities=17% Similarity=0.280 Sum_probs=112.0
Q ss_pred ceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeee-----ecCcCEEEEeC--CceeEEEEEeeecCCCCeEE
Q psy15734 30 NVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVV-----TQNKRVSITFN--DHRSWFLHLRDVQETDRGWY 102 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y 102 (314)
.+.+.+|+++.|.|.+.+.+.+.+.|++++...+........ ....++..... .....+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 567999999999999988888899999966432322111100 01223333321 11233699999999999999
Q ss_pred EEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEcCC
Q psy15734 103 MCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTIPN 182 (314)
Q Consensus 103 ~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~ 182 (314)
+|.+.+. ...+.|.|.. +. . +....+.+|+.+.|.|.+.+.|.|.+.|++
T Consensus 84 ~C~~~~~---~~~~~l~V~~---~~-~--~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~--------------------- 133 (184)
T 2ny1_B 84 ICEVEDQ---KEEVQLLVFG---LT-A--NSDTHLLQGQSLTLTLESPPGSSPSVQCRS--------------------- 133 (184)
T ss_dssp EEEETTE---EEEEEEEEEE---EE-E--SSCSEEETTCCEEEEEECCTTCCCEEEEEC---------------------
T ss_pred EEEEEcC---CCcEEEEEEE---ec-C--CCCceeecCCCEEEEEEcCCCCCCEEEEEe---------------------
Confidence 9999643 1234444442 11 1 122234555555555555555555555554
Q ss_pred CcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 183 QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
+++... ..+. .|.|.++..+|+|.|+|.|.|..+..
T Consensus 134 -----------------------------~~~~~~----------~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~~~~ 169 (184)
T 2ny1_B 134 -----------------------------PRGKNI----------QGGK-----TLSVSQLELQDSGTWTCTVLQNQKKV 169 (184)
T ss_dssp -----------------------------TTSCEE----------EESS-----EEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred -----------------------------CCCccc----------cCce-----EEEEecCCcCCCeEEEEEEEECCceE
Confidence 333221 1222 99999999999999999999999999
Q ss_pred eeEEEEEEEecCCC
Q psy15734 263 DGFIKVYVNLVDGD 276 (314)
Q Consensus 263 ~~~~~l~V~~~~~~ 276 (314)
...+.|.|...|.+
T Consensus 170 ~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 170 EFKIDIVVLAFQKA 183 (184)
T ss_dssp EEEEEEEEECCCC-
T ss_pred EEEEEEEEEecCCC
Confidence 99999999887653
No 96
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.90 E-value=5e-23 Score=165.26 Aligned_cols=139 Identities=19% Similarity=0.269 Sum_probs=94.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecC---CCceEEEEEEcCcee---EEEeee------------------eeeecCcCEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVEN---LREYKVAWVKMITQT---ILSIHH------------------KVVTQNKRVSI 79 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~---~~~~~v~W~~~~~~~---~~~~~~------------------~~~~~~~~~~~ 79 (314)
+..++..+.+.+|+++.|.|.+.+ .+.+.+.|++++... ...... ......+|+.+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 445677899999999999999976 678899999965321 111100 00112345444
Q ss_pred EeCCceeEEEEEeeecCCCCeEEEEEEecCCCc------ceeEEEEEEeC--CceeeecCcceeEEecCceEEEEEEecc
Q psy15734 80 TFNDHRSWFLHLRDVQETDRGWYMCQINTVPMT------SQKGYLQVVVP--PRILLDRTSTDVVVREGTEVTLECSAVG 151 (314)
Q Consensus 80 ~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~l~v~~~--p~~~~~~~~~~~~~~~g~~~~l~C~~~~ 151 (314)
..+ ..++|.|.+++.+|+|.|+|.+.+.... ...+.|.|..+ |.......+....+.+|+.+.|.|.+.+
T Consensus 85 ~~~--~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g 162 (250)
T 2fbo_J 85 ANL--AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTD 162 (250)
T ss_dssp SCT--TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEES
T ss_pred ccC--CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecC
Confidence 332 2347999999999999999999765322 33667777764 2222223345567778999999999999
Q ss_pred cCCCceEEEcCCCc
Q psy15734 152 YPEPYVAWRREDGK 165 (314)
Q Consensus 152 ~p~p~~~W~~~~~~ 165 (314)
.|.|.+.|++ ++.
T Consensus 163 ~p~p~v~W~k-~~~ 175 (250)
T 2fbo_J 163 CANANVTWYT-GPT 175 (250)
T ss_dssp CTTCEEEEEE-EEE
T ss_pred CCCCeeEEEe-CCC
Confidence 8888999998 443
No 97
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.90 E-value=3.5e-23 Score=161.95 Aligned_cols=192 Identities=21% Similarity=0.338 Sum_probs=121.6
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCc-eeEEEEEeeecCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDH-RSWFLHLRDVQET 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~ 97 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+..... ....+.....++. ....|.|.+++.+
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGG-ERVETDKD---DPRSHRMLLPSGSLFFLRIVHGRKSRP 82 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETT-EECCCTTT---CTTCSEEECTTSCEEESSCCCCSSCCC
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECC-EEeecccc---ccccceEEecCCcEEEEEEEecCCCcc
Confidence 45788888999999999999999999988888899999954 32211000 0000111111110 0113556678999
Q ss_pred CCeEEEEEEecCCCc--ceeEEEEEEeCC-ceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCCee
Q psy15734 98 DRGWYMCQINTVPMT--SQKGYLQVVVPP-RILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNGEL 173 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~--~~~~~l~v~~~p-~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~~~ 173 (314)
|+|.|+|.+.+.... +....|.|...+ .+... +....+..|+.+.|.|.+ .+.|.|.+.|++ ++.
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~-------- 151 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQN--PSDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGS-------- 151 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECEECSSCSBC--CCCEEEETTSCEEEECBCCCEESCCEEEEEE-TTE--------
T ss_pred cCeEEEEEEECCCCceeecceEEEEEeccccceeC--CCceEecCCCcEEEEEecCCCCCCCEEEEEE-CCc--------
Confidence 999999999765322 334566665433 22221 234556677777777776 666666777776 322
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
.+...... . ...++ .|.|.++..+|+|.|+|
T Consensus 152 ------------------------------------------~l~~~~~~-~-~~~~~-----~L~i~~~~~~d~G~Y~C 182 (212)
T 2v9r_A 152 ------------------------------------------PLDDKDER-I-TIRGG-----KLMITYTRKSDAGKYVC 182 (212)
T ss_dssp ------------------------------------------EECTTSTT-E-EEETT-----EEEESSCCGGGCEEEEE
T ss_pred ------------------------------------------cCCCCcce-E-EccCC-----eEEEeeCCHhhCeeEEE
Confidence 22211111 1 11233 89999999999999999
Q ss_pred EEeeCCCCcee-EEEEEEEecC
Q psy15734 254 VAVNALGETDG-FIKVYVNLVD 274 (314)
Q Consensus 254 ~a~n~~g~~~~-~~~l~V~~~~ 274 (314)
.|.|..|.... .+.|.|..+|
T Consensus 183 ~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 183 VGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EEEETTEEEECCCEEEEEEC--
T ss_pred EEecccCceecceEEEEEEeCc
Confidence 99999998654 4888887664
No 98
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.90 E-value=6e-22 Score=151.50 Aligned_cols=170 Identities=17% Similarity=0.309 Sum_probs=119.1
Q ss_pred ceEEEcCCcEEEEEEecCCCce--EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEe
Q psy15734 30 NVTATVGKEALMACVVENLREY--KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQIN 107 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 107 (314)
...+.+|+++.|.|.+.+.+.+ .+.|++++ ..+.. .... .....|.|. +.+|+|.|+|.+.
T Consensus 7 ~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~-~~l~~--------~~~~------~~~~~l~i~--~~~d~G~Y~C~~~ 69 (184)
T 3b5h_A 7 TTVEDLGSKILLTCSLNDSATEVTGHRWLKGG-VVLKE--------DALP------GQKTEFKVD--SDDQWGEYSCVFL 69 (184)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCEEEEESSS-EEEEC--------TTCC------CSEEEEEEC--GGGCCEEEEEEEE
T ss_pred EEEEecCCCEEEEEECCCCCCCceEEEEEeCC-EEeec--------cccc------CCcEEEEEe--chhhCeEEEEEEE
Confidence 3568899999999999876655 99999944 43321 1110 011256666 6899999999998
Q ss_pred cCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccC-CCceEEEcCCCceeecCCeeCCCeEEcCCCcce
Q psy15734 108 TVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYP-EPYVAWRREDGKAINYNGELVPPMLTIPNQLEG 186 (314)
Q Consensus 108 ~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~ 186 (314)
+ .......|.|..+|.+...+ ....+.+|+.+.|.|.+.+.| .|.+.|++.++.
T Consensus 70 n--~~~~~~~l~V~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~--------------------- 124 (184)
T 3b5h_A 70 P--EPMGTANIQLHGPPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDS--------------------- 124 (184)
T ss_dssp S--TTSCEEEEEECCSCCCEESC--SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSS---------------------
T ss_pred C--CcCcEEEEEEecCCceeecC--CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCC---------------------
Confidence 6 33466788888888876654 455678899999999988888 788999883210
Q ss_pred eecCccEEEEEEEeecCCceeEEecCCCeeeec--CCceeeeEeeCCeeeEEEEEEeecC-CCCCeEEEEEEeeCCCCce
Q psy15734 187 AFVSQTVELHCHTEAFPASLNYWTNEKGDMIIT--GDDYEDSRLINGYSCHMTLKIRSIL-SHQFGSYRCVAVNALGETD 263 (314)
Q Consensus 187 v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~--~~~~~~~~~~~~~~~~s~L~i~~~~-~~d~G~Y~C~a~n~~g~~~ 263 (314)
+...+.. ..++.+... + ..+.|.|.++. .+|+|.|+|.|.|..|...
T Consensus 125 --------------------------~~~~~~~~~~~~~~~~~~-~---~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~ 174 (184)
T 3b5h_A 125 --------------------------EDKALMNGSESRFFVSSS-Q---GRSELHIENLNMEADPGQYRCNGTSSKGSDQ 174 (184)
T ss_dssp --------------------------SCEECCTTGGGTEEEEEE-T---TEEEEEECSCCTTTSSEEEEEEEEETTEEEE
T ss_pred --------------------------CCEEeecCCCCEEEEEec-C---CeeEEEEeeccccccCceEEEEEEeCCCcce
Confidence 1111111 122222211 1 12489999999 8999999999999999998
Q ss_pred eEEEEEEE
Q psy15734 264 GFIKVYVN 271 (314)
Q Consensus 264 ~~~~l~V~ 271 (314)
..+.|.|.
T Consensus 175 ~~~~l~V~ 182 (184)
T 3b5h_A 175 AIITLRVR 182 (184)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 88888875
No 99
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.90 E-value=3.7e-22 Score=151.45 Aligned_cols=168 Identities=15% Similarity=0.142 Sum_probs=116.4
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceE-EEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYK-VAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~-v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
...+|.+...+....+.+|++++|.|.+.+.+.+. +.|++++ ..+. . ....|.|.+++.
T Consensus 4 ~~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~-~~~~--------~-----------~~~~L~i~~~~~ 63 (175)
T 1fnl_A 4 DLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNE-SLIS--------S-----------QASSYFIDAATV 63 (175)
T ss_dssp CCCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETT-EEEE--------S-----------SCSEEEESSCCG
T ss_pred CCCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECC-EEcc--------C-----------CceEEEEeCCCc
Confidence 34578888888888999999999999998876555 7899954 3221 1 112799999999
Q ss_pred CCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCC-CceEEEcCCCceeecCCeeCC
Q psy15734 97 TDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE-PYVAWRREDGKAINYNGELVP 175 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p~~~W~~~~~~~~~~~~~~~~ 175 (314)
+|+|.|+|.+.+. ..+..+.|.|..++..... ....+.+|+.+.|.|.+.+.++ +.+.|++ ++
T Consensus 64 ~d~G~Y~C~~~n~-~~s~~~~l~V~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g----------- 127 (175)
T 1fnl_A 64 NDSGEYRCQTNLS-TLSDPVQLEVHIGWLLLQA---PRWVFKEEDPIHLRCHSWKNTALHKVTYLQ-NG----------- 127 (175)
T ss_dssp GGCEEEEEECSSS-CCCCCEEEEEECSSEEEEC---SCSEEETTCCEEEEEEECTTCCCEEEEEEE-TT-----------
T ss_pred ccCEEEEEEeeCC-cccccEEEEEeCCCceeeC---CCceecCCCCEEEEEEcCCCCCceEEEEEE-CC-----------
Confidence 9999999999753 3355667777654433222 2244667777777777766544 3677776 32
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
..+.. ...+ ..|.|.+++.+|+|.|+|.|
T Consensus 128 ---------------------------------------~~~~~-------~~~~-----~~L~i~~v~~~d~G~Y~C~a 156 (175)
T 1fnl_A 128 ---------------------------------------KDRKY-------FHHN-----SDFHIPKATLKDSGSYFCRG 156 (175)
T ss_dssp ---------------------------------------EEEEE-------EEEC-----CCEEESSCCGGGCEEEEEEE
T ss_pred ---------------------------------------eEccC-------CCCC-----CEEEEcccChhhCeEEEEEE
Confidence 21110 0112 28999999999999999999
Q ss_pred eeCCCC-ceeEEEEEEEe
Q psy15734 256 VNALGE-TDGFIKVYVNL 272 (314)
Q Consensus 256 ~n~~g~-~~~~~~l~V~~ 272 (314)
.|..+. .+..+.|.|..
T Consensus 157 ~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 157 LVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EETTEEEECCCEEEEEEC
T ss_pred EcCCCCccCccEEEEEeC
Confidence 997653 45667777653
No 100
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.90 E-value=1.3e-23 Score=177.09 Aligned_cols=188 Identities=18% Similarity=0.194 Sum_probs=128.6
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
....+|.+...+..+.+.+|+++.|.|.+.+.+.+.+.|++++....... .+. .....+.|.|.+++.
T Consensus 154 ~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~--------~~~----~~~~~~~L~i~~v~~ 221 (347)
T 2ifg_A 154 ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATV--------MKS----GGLPSLGLTLANVTS 221 (347)
T ss_dssp TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEE--------CCC----CCSSEEEEEEESCCS
T ss_pred ccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeeccc--------ccc----eecccceEEEeeCCh
Confidence 34568899888889999999999999999998889999999664322110 000 112334899999999
Q ss_pred CCCe-EEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC
Q psy15734 97 TDRG-WYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV 174 (314)
Q Consensus 97 ~d~G-~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~ 174 (314)
+|+| .|+|.+.+. +.....+.|.|..+|.+ .. ....+|+.+.|.|.+.|.|.|.+.|++ ++..+
T Consensus 222 ~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i-~~-----~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~l------- 287 (347)
T 2ifg_A 222 DLNRKNVTCWAENDVGRAEVSVQVNVSFPASV-QL-----HTAVEMHHWCIPFSVDGQPAPSLRWLF-NGSVL------- 287 (347)
T ss_dssp TTTTCCEEECCEETTEECCEEECCCCBEEEEE-EE-----CCCEESSSEEEEEEEEEESCCEEEEEE-TTEEC-------
T ss_pred HHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee-ee-----ccCccCceEEEEEEeeecCCCcEEEEe-CCEEC-------
Confidence 9999 999999765 33445555666555554 11 113456777777777777777777776 43322
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEee---CCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLI---NGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~---~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
............ +......+|.|.++..+|+|.|
T Consensus 288 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y 324 (347)
T 2ifg_A 288 -------------------------------------------NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 324 (347)
T ss_dssp -------------------------------------------CCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEE
T ss_pred -------------------------------------------CCCcceeeEEEeecCCCcccceEEEECCCCcccCceE
Confidence 111111111000 1111234899999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEEec
Q psy15734 252 RCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
+|.|.|..|...+++.|.|..+
T Consensus 325 ~C~a~N~~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 325 TLLAANPFGQASASIMAAFMDN 346 (347)
T ss_dssp EEEEEETTEEEEEEEEECSCCC
T ss_pred EEEEecCCCceeeEEEEEecCC
Confidence 9999999999999988887654
No 101
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.90 E-value=1e-22 Score=154.64 Aligned_cols=170 Identities=21% Similarity=0.247 Sum_probs=117.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCce-EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREY-KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
..+|.+...+..+.+.+|+++.|.|.+.+.+.+ .+.|++++ ..+ ..+ ...|.|.+++.+
T Consensus 2 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~-~~~--------~~~-----------~~~L~i~~v~~~ 61 (176)
T 1f2q_A 2 PQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNG-SLS--------EET-----------NSSLNIVNAKFE 61 (176)
T ss_dssp --CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETT-EEC--------SCC-----------SSEEEECSCCGG
T ss_pred CCCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECC-eEC--------CCC-----------ceEEEEecccee
Confidence 356888888888899999999999999887663 69999954 321 111 127999999999
Q ss_pred CCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCCeeCCC
Q psy15734 98 DRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~~~~~p 176 (314)
|+|.|+|.+.+. ..+..+.|.|..++..... ....+.+|+.+.|.|.+. +.|.+.+.|++ ++..
T Consensus 62 d~G~Y~C~~~~~-~~s~~~~l~V~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~---------- 126 (176)
T 1f2q_A 62 DSGEYKCQHQQV-NESEPVYLEVFSDWLLLQA---SAEVVMEGQPLFLRCHGWRNWDVYKVIYYK-DGEA---------- 126 (176)
T ss_dssp GCEEEEEECTTS-SCCCCEEEEEECSSEEEEE---SCSEEETTSCEEEEEEEGGGCCEEEEEEEE-TTEE----------
T ss_pred cCEEEEEEcCCc-cccccEEEEEeCcceeecC---CcceeeCCCCEEEEEEecCCCCceEEEEEE-CCEE----------
Confidence 999999999653 3355667777744433322 224566778888888774 44556777777 3321
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
+... ..+. .|.|.++..+|+|.|+|.|.
T Consensus 127 ----------------------------------------~~~~-------~~~~-----~L~i~~v~~~d~G~Y~C~a~ 154 (176)
T 1f2q_A 127 ----------------------------------------LKYW-------YENH-----NISITNATVEDSGTYYCTGK 154 (176)
T ss_dssp ----------------------------------------CCSC-------CCSS-----EEEESSCCGGGCEEEEEEEE
T ss_pred ----------------------------------------Eeee-------cCCC-----eEEECCCCcccCEEEEEEEE
Confidence 1100 0112 99999999999999999999
Q ss_pred eCCC-CceeEEEEEEEecCC
Q psy15734 257 NALG-ETDGFIKVYVNLVDG 275 (314)
Q Consensus 257 n~~g-~~~~~~~l~V~~~~~ 275 (314)
|..+ ..+..+.|.|..+|.
T Consensus 155 n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 155 VWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp ETTEEEECCCEEEEEECSCC
T ss_pred eCCcceEecCEEEEEecCCC
Confidence 9644 345668888887653
No 102
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.89 E-value=2.1e-22 Score=155.94 Aligned_cols=183 Identities=14% Similarity=0.115 Sum_probs=113.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+. ..+.+|++++|.|.+.+.+. .+.|+|++.. +... ..... . ......|.|.+++.+|
T Consensus 3 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~-~~~~------~~~~~-~---~~~~~~L~i~~v~~~D 69 (198)
T 1ugn_A 3 LPKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKT-APWI------TRIPQ-E---LVKKGQFPIPSITWEH 69 (198)
T ss_dssp CCCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSC-CHHH------HTSCH-H---HHTTTEEEESSCCGGG
T ss_pred CCCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCcc-cccc------ccccc-c---CCcccEEEECCCCHHH
Confidence 35678877676 48999999999999988665 7999995532 2100 00000 0 0011279999999999
Q ss_pred CeEEEEEEecCC----CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTVP----MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~----~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~ 171 (314)
+|.|+|.+.+.. ..+..+.|.|.. +|.+... ....+.+|+.+.|.|.+.+. .+.+.|++ ++..+
T Consensus 70 ~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~---~~~~v~~G~~v~L~C~~~~~-~~~v~W~k-~g~~~---- 140 (198)
T 1ugn_A 70 TGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQ---PSPVVNSGGNVTLQCDSQVA-FDGFILCK-EGEDE---- 140 (198)
T ss_dssp CEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEE---SCSEEETTCCEEEEEECSSC-CSEEEEEE-C--------
T ss_pred CeEEEEEEECCCCCcccCCccEEEEEcccccCCccccC---CccccCCCCcEEEEEecCCC-CcEEEEEE-CCCcc----
Confidence 999999997653 234556777766 2333322 12456677788888877766 56777777 32211
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
......+... ..+ .....|.|.+++.+|+|.|
T Consensus 141 ---------------------------------------------~~~~~~~~~~-~~~--~~~~~L~i~~v~~~D~G~Y 172 (198)
T 1ugn_A 141 ---------------------------------------------HPQCLNSQPH-ARG--SSRAIFSVGPVSPSRRWWY 172 (198)
T ss_dssp -----------------------------------------------CEEEC---------CCEEEEEECCCCTTSCEEE
T ss_pred ---------------------------------------------CCcccccccc-CCC--cceeEEEecccCcccCeEE
Confidence 0000000000 000 0123999999999999999
Q ss_pred EEEEeeCCCC-----ceeEEEEEEE
Q psy15734 252 RCVAVNALGE-----TDGFIKVYVN 271 (314)
Q Consensus 252 ~C~a~n~~g~-----~~~~~~l~V~ 271 (314)
+|.|.|..+. .+..+.|.|.
T Consensus 173 ~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 173 RCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EEEEEeCCCCccccCcCceEEEEec
Confidence 9999998752 2455666654
No 103
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.89 E-value=6.8e-22 Score=153.47 Aligned_cols=183 Identities=13% Similarity=0.182 Sum_probs=116.5
Q ss_pred CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
+...+.+.+|+++.|.|.+.|.|.+.+.|++..+..+ ..+.. ..+ ..+.|.|.+++.+|+|.|+|.+
T Consensus 7 p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~----------~~~~~--~~~-~~~~L~I~~v~~~D~G~Y~C~a 73 (202)
T 1vca_A 7 PESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL----------NGKVT--NEG-TTSTLTMNPVSFGNEHSYLCTA 73 (202)
T ss_dssp SSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC----------SSEEE--EET-TEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc----------cceEE--EcC-CccEEEECcCCHHHCEEEEEEE
Confidence 3444556699999999999988888999998432211 01111 111 1236999999999999999999
Q ss_pred ecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CC--CceEEEcCCCceeecCCeeCCCeEEcCC
Q psy15734 107 NTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE--PYVAWRREDGKAINYNGELVPPMLTIPN 182 (314)
Q Consensus 107 ~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~--p~~~W~~~~~~~~~~~~~~~~p~~~~~~ 182 (314)
.+. +..+..+.|.|..+|....... . ..+.+|+.++|.|.+.+. |. +.+.|++ ++..+.
T Consensus 74 ~n~~~~~~~~~~l~V~~~p~~~~~~~-~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~-------------- 136 (202)
T 1vca_A 74 TCESRKLEKGIQVEIYSFPKDPEIHL-S-GPLEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMK-------------- 136 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCSCCEEEE-S-SCEETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEE--------------
T ss_pred EECCceEeeEEEEEEEeCCCCCEeCC-c-eEEcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECc--------------
Confidence 775 3345566788887765433221 1 346677888888887764 32 2567777 332221
Q ss_pred CcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 183 QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
.............+...+.|.|.....+|.|.|+|+|.|..+..
T Consensus 137 ------------------------------------~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 137 ------------------------------------SQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp ------------------------------------EEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCC
T ss_pred ------------------------------------ccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCC
Confidence 00000000000012234578898888889999999999988763
Q ss_pred -------eeEEEEEEEecCC
Q psy15734 263 -------DGFIKVYVNLVDG 275 (314)
Q Consensus 263 -------~~~~~l~V~~~~~ 275 (314)
+.++.|.|.++|.
T Consensus 181 ~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 181 DSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TTSCSEEEEEEECCEECCC-
T ss_pred CCcceeEeeEEEEEEecCCC
Confidence 4578888887764
No 104
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.89 E-value=2.2e-22 Score=155.98 Aligned_cols=175 Identities=24% Similarity=0.332 Sum_probs=109.4
Q ss_pred cCCcceEEEcCCcEEEEEE-ecCCCc-eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEE
Q psy15734 26 EPVANVTATVGKEALMACV-VENLRE-YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYM 103 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~-~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 103 (314)
.++..+.+.+|+++.|.|. +.+.+. +.+.|++++..... ..+.+...... .+.|.|.+++.+|+|.|+
T Consensus 13 ~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~-------~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~ 82 (201)
T 3s97_C 13 EERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFI-------TMDKRRFVSQT---NGNLYIANVEASDKGNYS 82 (201)
T ss_dssp SCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBC-------CCSSSEEECTT---TCCEEESSCCGGGCEEEE
T ss_pred CCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeee-------eeCCCeEEEcC---CCeEEECcCCcccCeEEE
Confidence 4567899999999999999 777777 89999996543211 11222222211 136999999999999999
Q ss_pred EEEecCCCc-ce---eEEEEEEe-------CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCe
Q psy15734 104 CQINTVPMT-SQ---KGYLQVVV-------PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGE 172 (314)
Q Consensus 104 C~~~~~~~~-~~---~~~l~v~~-------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~ 172 (314)
|.+.+.... .. ...+.+.. +|.+.... ....
T Consensus 83 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~------------------------------------ 124 (201)
T 3s97_C 83 CFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQF--KDVY------------------------------------ 124 (201)
T ss_dssp EEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEEC--CCEE------------------------------------
T ss_pred EEEEecCCCcchhhcccceeeccccccCCCCCceEecC--CceE------------------------------------
Confidence 999763211 11 12222221 11111111 1233
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+..|+.+.|.|.+.|.|.|.+.|++++. .+... ... ...+. .|.|.++..+|+|.|+
T Consensus 125 --------------~~~g~~~~l~C~~~g~p~p~v~W~~~~~-~~~~~--~~~-~~~~~-----~L~i~~v~~~d~G~Y~ 181 (201)
T 3s97_C 125 --------------ALMGQNVTLECFALGNPVPDIRWRKVLE-PMPST--AEI-STSGA-----VLKIFNIQLEDEGIYE 181 (201)
T ss_dssp --------------EETTCCEEEEEEEEEESCCEEEEEETTB-CCCTT--CEE-ETTTT-----EEEECSCCGGGCEEEE
T ss_pred --------------EecCCcEEEEEEccCCCCCceEEEeCCC-cCCCc--eee-cCCCC-----EEEEccCChhhCEEEE
Confidence 3445555555555555555555555433 12111 111 11233 8999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEE
Q psy15734 253 CVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~ 271 (314)
|.|.|..|....++.|.|+
T Consensus 182 C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 182 CEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEecCCceeeeEEEEEe
Confidence 9999999999999988885
No 105
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.89 E-value=1.6e-22 Score=156.42 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=78.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+.. .+.+|++++|.|.+.+.+. .+.|+|++.. +..... . .......+.|.|.+++.+|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~-~~~~~~-----~-----~~~~~~~~~L~i~~v~~~D 69 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSP-EPWDTQ-----N-----PLEPKNKARFSIPSMTEHH 69 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCS-SCSEEE-----C-----CCSSTTEEEEEESSCCGGG
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCC-CCcccc-----c-----ccCCccccEEEeccCChhH
Confidence 356788777764 7999999999999987665 9999996532 211000 0 0011223479999999999
Q ss_pred CeEEEEEEecCC---CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEc
Q psy15734 99 RGWYMCQINTVP---MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRR 161 (314)
Q Consensus 99 ~G~Y~C~~~~~~---~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~ 161 (314)
+|.|+|.+.+.. ..+..+.|.|.. +|.+... ....+.+|+.++|.|.+.+.| +.+.|++
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~---~~~~v~~G~~v~L~C~~~~~p-~~~~W~k 134 (196)
T 2d3v_A 70 AGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSAL---PSPVVTSGENVTLQCGSRLRF-DRFILTE 134 (196)
T ss_dssp CEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC--------------CEEEEEESSCC-SEEEEEE
T ss_pred CeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEcc---CCccccCCCcEEEEEEcCCCC-CEEEEEc
Confidence 999999997652 223456677765 2333322 123566777777777777766 6777777
No 106
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.89 E-value=5.7e-22 Score=155.35 Aligned_cols=192 Identities=20% Similarity=0.289 Sum_probs=116.8
Q ss_pred cCCcceEEEcCCcEEEEEEecCCCce---EEEEEEcCceeEEEeeeee---------eecCcCEEEEeCC--ceeEEEEE
Q psy15734 26 EPVANVTATVGKEALMACVVENLREY---KVAWVKMITQTILSIHHKV---------VTQNKRVSITFND--HRSWFLHL 91 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~~~~L~i 91 (314)
..++.+++.+|++++|.|.+.+.+.+ .|.|+|++........... .....|+.+.... ...++|.|
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I 83 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLL 83 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEE
Confidence 45678999999999999999876543 5899996532211100000 0112344333221 22457999
Q ss_pred eeecCCCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec
Q psy15734 92 RDVQETDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY 169 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~ 169 (314)
.+++.+|+|.|.|.+.+.... .....+.+..++...... .....+..|+.+.+.|.+.+.|.|.+.|++ ++.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~-~~~---- 157 (218)
T 4frw_A 84 RNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNP-GPALEEGQGLTLAASCTAEGSPAPSVTWDT-EVK---- 157 (218)
T ss_dssp SSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEE-CSCEETTCCSEEEEEEEEEEBSCCEEEEEE-SSC----
T ss_pred eeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeee-eeeeeeeeccccceeeeccCCcCceEEEEE-CCc----
Confidence 999999999999998653222 222233333333322221 233445566667777777666667777766 222
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
... ..... ...+.+...+.|.|.++..+|+|
T Consensus 158 ---------------------------------------------~~~-~~~~~---~~~~~~~~~s~L~i~~~~~~d~g 188 (218)
T 4frw_A 158 ---------------------------------------------GTT-SSRSF---KHSRSAAVTSEFHLVPSRSMNGQ 188 (218)
T ss_dssp ---------------------------------------------CEE-EEEEE---ECSSSEEEEEEEEECCCGGGTTC
T ss_pred ---------------------------------------------ccc-cCceE---ecCCcEEEEEEEEEeeCCHHhCe
Confidence 111 11100 01122334568999999999999
Q ss_pred EEEEEEeeCCCCceeEEEEEEEe
Q psy15734 250 SYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
.|+|.|.|..|.....+.+.|.+
T Consensus 189 ~YtC~a~N~~g~~~~~~t~~v~V 211 (218)
T 4frw_A 189 PLTCVVSHPGLLQDQRITHILHV 211 (218)
T ss_dssp EEEEEEECTTCSSCEEEEEECCE
T ss_pred EEEEEEEeCCCCeEEEEEEEEEE
Confidence 99999999999988777776644
No 107
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=4e-22 Score=154.14 Aligned_cols=180 Identities=13% Similarity=0.136 Sum_probs=111.1
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++...... . ...........|.|.+++.+|+
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~----------~~~~~~~~~~~L~i~~v~~~D~ 70 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWD-R----------QNPLEPKNKARFSIPSMTEDYA 70 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSE-E----------ECCCSSSSEEEEEESSCCGGGC
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccc-c----------cccccCCceEEEEeccCCcccC
Confidence 46777777777 8999999999999988 66799999965432110 0 0000111234799999999999
Q ss_pred eEEEEEEecCCC---cceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee
Q psy15734 100 GWYMCQINTVPM---TSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL 173 (314)
Q Consensus 100 G~Y~C~~~~~~~---~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~ 173 (314)
|.|+|.+.+... .+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+. .+.+.|++ ++
T Consensus 71 G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~---~~~v~~G~~v~L~C~~~~~-~~~~~w~k-~g--------- 136 (196)
T 3p2t_A 71 GRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALP---SPLVTSGKSVTLLCQSRSP-MDTFLLCK-ER--------- 136 (196)
T ss_dssp EEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEES---CSEECTTCCEEEEEEEEEE-EEEEEEEE-TT---------
T ss_pred ceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCC---cceecCCCeEEEEEecCCC-CCEEEEEe-CC---------
Confidence 999999977532 24455666654 23333222 1245566666677766552 34566665 22
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
.............. ......|.|.+++.+|+|.|+|
T Consensus 137 ----------------------------------------~~~~~~~~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C 172 (196)
T 3p2t_A 137 ----------------------------------------AAHPLLCLRSEHGA----QQHQAEFPMSPVTSVHGGTYRC 172 (196)
T ss_dssp ----------------------------------------CCCGGGSEEEEEEE----EEEEEEEEECSCCGGGCEEEEE
T ss_pred ----------------------------------------Ccccceeecccccc----cCcceEEEeCCCcccCCCeEEE
Confidence 21111110000000 0112489999999999999999
Q ss_pred EEeeCCC-----CceeEEEEEE
Q psy15734 254 VAVNALG-----ETDGFIKVYV 270 (314)
Q Consensus 254 ~a~n~~g-----~~~~~~~l~V 270 (314)
.|.|..+ ..+..+.|.|
T Consensus 173 ~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 173 FSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp EEECGGGTTEECCCCCCEEEEE
T ss_pred EEEcCCCCcccCCCCCCEEEEe
Confidence 9999875 3344555555
No 108
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.89 E-value=1e-22 Score=172.63 Aligned_cols=197 Identities=14% Similarity=0.120 Sum_probs=136.8
Q ss_pred eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCC
Q psy15734 31 VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVP 110 (314)
Q Consensus 31 ~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (314)
..+.+|+++.|.|.+.+.|.+.+.|+++++.. . . ..+.|.|.+++.+|+|.|+|.+.+..
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-~---------------~----~~~~L~i~~v~~~d~G~Y~C~a~~~~ 165 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-I---------------Q----GGKTLSVSQLELQDSGTWTCTVLQNQ 165 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECSSSCE-E---------------E----ESSEEEECSBCGGGCEECEEEEEETT
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-c---------------c----cceEEEEeeCChhcCCEEEEEEecCC
Confidence 35789999999999988888999999965331 0 0 11279999999999999999997643
Q ss_pred -CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecc-----cCCCceEEEcCCCceeec--------CCeeC--
Q psy15734 111 -MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVG-----YPEPYVAWRREDGKAINY--------NGELV-- 174 (314)
Q Consensus 111 -~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-----~p~p~~~W~~~~~~~~~~--------~~~~~-- 174 (314)
.....+.|.|..+|... ....+.+|+.+.|.|.+.+ +|.|.+.|++ ++..+.. +....
T Consensus 166 ~~~~~~~~l~v~~~p~~~-----~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~~ 239 (363)
T 1wio_A 166 KKVEFKIDIVVLAFQKAS-----SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQA-ERASSSKSWITFDLKNKEVSVK 239 (363)
T ss_dssp EEEEECCEECEECCSCSE-----EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEE-SSCCCCCCEEEEEECSSCEEEE
T ss_pred CeEEEEEEEEEecCCCCC-----CceEEecCCEEEEEEEEecccccCCCceeEEEec-CCCCccceEEEEEecCCeeecc
Confidence 22334456666555432 4556889999999998877 7889999998 5554432 11100
Q ss_pred --------------CCeEEcCC---------------C----c--------ceeecCccEEEEEEEeecCCce--eEEec
Q psy15734 175 --------------PPMLTIPN---------------Q----L--------EGAFVSQTVELHCHTEAFPASL--NYWTN 211 (314)
Q Consensus 175 --------------~p~~~~~~---------------~----~--------~~v~~g~~~~l~C~~~g~p~p~--~~W~~ 211 (314)
...+.+.. . . +....|+.+.|.|.+.|.|+|. +.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~ 319 (363)
T 1wio_A 240 RVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKL 319 (363)
T ss_dssp EEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEECCCSSSEEEEEESSCCTTCCEEEEC
T ss_pred ccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEecCCCeeEEEEEccccCCCccEEEEe
Confidence 00111100 0 0 0112378999999999999998 99999
Q ss_pred CCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 212 EKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
++..... ...|.|.++..+|+|.|+|.|.|. |....+..|.|
T Consensus 320 ~~~~~~~----------------~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 320 ENKEAKV----------------SKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp SSSSCSE----------------EESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred CCCceee----------------eeeeeeeeeccccceeEEEEEecC-CeEEEecceEe
Confidence 7543221 126788999999999999999965 45555655554
No 109
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.89 E-value=1.2e-22 Score=160.12 Aligned_cols=194 Identities=21% Similarity=0.277 Sum_probs=115.8
Q ss_pred cceEEEcCCcEEEEEEecCCCc-----eEEEEEEcCceeEEEeeee----eeecCcCEEEEeCC--ceeEEEEEeeecCC
Q psy15734 29 ANVTATVGKEALMACVVENLRE-----YKVAWVKMITQTILSIHHK----VVTQNKRVSITFND--HRSWFLHLRDVQET 97 (314)
Q Consensus 29 ~~~~v~~g~~~~l~C~~~~~~~-----~~v~W~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~L~i~~~~~~ 97 (314)
+.+.+.+|+++.|.|.+.+.+. +.+.|++++.......... ......|+.+..+. ...++|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3567889999999999977543 8999999764432211110 01123444443221 11347999999999
Q ss_pred CCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEcCCCceeecCCeeCCC
Q psy15734 98 DRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRREDGKAINYNGELVPP 176 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~~~~~~~~~~~~~~~p 176 (314)
|+|.|+|.+.+.+..+..+.|.|..++............+..|+.+.|.|.+ .+.|.|.+.|++.+
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~------------- 149 (222)
T 4i0k_A 83 DEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQ------------- 149 (222)
T ss_dssp GCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTT-------------
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCC-------------
Confidence 9999999997655555555566655422111111122345556666666666 45566666666532
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
+..+............++ ..+.|.|.++..+|+|.|+|.|.
T Consensus 150 -------------------------------------~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~~~d~G~Y~C~a~ 190 (222)
T 4i0k_A 150 -------------------------------------GVPLTGNVTTSQMANERG--LFDVHSVLRVVLGANGTYSCLVR 190 (222)
T ss_dssp -------------------------------------SCBCCSEEEEEEEECTTS--CEEEEEEEEEECCTTCEEEEEEE
T ss_pred -------------------------------------CccCCCCcceeEEcCCCC--eEEEEEEEEEEeCCCCEEEEEEE
Confidence 221111111111111111 12368899999999999999999
Q ss_pred eCCCCceeEEEEEEEecC
Q psy15734 257 NALGETDGFIKVYVNLVD 274 (314)
Q Consensus 257 n~~g~~~~~~~l~V~~~~ 274 (314)
|..|.....+.|.|..+|
T Consensus 191 n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 191 NPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp ETTTTEEEEEEEECCC--
T ss_pred CCCCCCceEEEEEEeCCc
Confidence 999999999998887654
No 110
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.89 E-value=4.4e-22 Score=156.43 Aligned_cols=191 Identities=16% Similarity=0.254 Sum_probs=114.3
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcC---ceeEEEeeee----e--eecCcCEEEEeCCceeEEEEE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENL-REYKVAWVKMI---TQTILSIHHK----V--VTQNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~---~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~L~i 91 (314)
|.+..++ .+.+.+|++++|.|.+.+. +.+.+.|+|.. .......... . .....|+.+.. ....++|.|
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I 79 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-SGADRYLSI 79 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-ETTEEEEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-CCceEEEEE
Confidence 5566677 8999999999999999887 88999999943 1111111000 0 11124666654 233458999
Q ss_pred eeecCCCCeEEEEEEecCCC------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEE
Q psy15734 92 RDVQETDRGWYMCQINTVPM------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAW 159 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W 159 (314)
.+++.+|+|.|+|.+.+... ......|.|.. +|.+.... .......|+.+.|.|.+.+ .|.+ .+.|
T Consensus 80 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~--~~~~~~~~~~v~L~C~~~g~~p~~~~v~W 157 (218)
T 3s96_B 80 SNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFP--PSSEELKENKATLVCLISNFSPSGVTVAW 157 (218)
T ss_dssp SSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSSCCEEEE
T ss_pred ccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeC--CCcccccCCcEEEEEEECcccCCCeEEEE
Confidence 99999999999999965431 22334666663 34333322 1112334566666666665 3444 5666
Q ss_pred EcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEE
Q psy15734 160 RREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~ 239 (314)
++ ++..+. ............+.+...+.|.
T Consensus 158 ~k-~g~~l~-------------------------------------------------~~~~~~~~~~~~~~~~~~s~l~ 187 (218)
T 3s96_B 158 KA-NGTPIT-------------------------------------------------QGVDTSNPTKEGNKFMASSFLH 187 (218)
T ss_dssp EE-TTEEC---------------------------------------------------------------CEEEEEEEE
T ss_pred EE-CCEECc-------------------------------------------------CceecCcccccCCcEEEEEEEE
Confidence 66 333221 1000000111122244455799
Q ss_pred EeecCCCCCeEEEEEEeeCCCCceeEE
Q psy15734 240 IRSILSHQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
|.....+|+|.|+|.|.|..+....++
T Consensus 188 i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 188 LTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EeHHHccCCCeEEEEEEeCCCcccccc
Confidence 999999999999999999987555443
No 111
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.89 E-value=2.2e-22 Score=156.93 Aligned_cols=185 Identities=19% Similarity=0.182 Sum_probs=113.4
Q ss_pred CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc----eeEEEeee--ee----eecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 27 PVANVTATVGKEALMACVVENLREYKVAWVKMIT----QTILSIHH--KV----VTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~----~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.+....+.+|+++.|.|...+.+.+.+.|++++. ..+..... .. ....+|+.+..+ ++|.|.+++.
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~----~~L~i~~v~~ 80 (208)
T 3r4d_A 5 EAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN----GSLLFQMITM 80 (208)
T ss_dssp EEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT----SCEEECSCCG
T ss_pred cCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC----CeEEEccccc
Confidence 4445789999999999998777888999998542 11111100 00 011234444322 2699999999
Q ss_pred CCCeEEEEEEecCC--CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeC
Q psy15734 97 TDRGWYMCQINTVP--MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELV 174 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~--~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~ 174 (314)
+|+|.|+|.+.+.. .....+.|.|..++........... +..|+.+.|.|.+.+.| |.+.|++ ++.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~g~~v~l~C~~~~~p-p~i~W~~-~g~--------- 148 (208)
T 3r4d_A 81 KDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT-VKELDSVTLTCLSNDIG-ANIQWLF-NSQ--------- 148 (208)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS-CCTTCCEEEEEECSCTT-CEEEEEE-TTE---------
T ss_pred cCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce-EeeCCCEEEEEECCCCC-CceEEEE-CCE---------
Confidence 99999999997652 3344455666654321111101111 56677777777766644 5666666 332
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
.+....++.+. ..+. +|.|.++..+|+|.|+|.
T Consensus 149 -----------------------------------------~l~~~~~~~~~-~~~~-----~L~i~~v~~~d~G~Y~C~ 181 (208)
T 3r4d_A 149 -----------------------------------------SLQLTERMTLS-QNNS-----ILRIDPIKREDAGEYQCE 181 (208)
T ss_dssp -----------------------------------------ECCCCSSEEEE-TTTT-----EEEESSCCGGGCEEEEEE
T ss_pred -----------------------------------------eCCCCCCeEEc-CCCC-----EEEEeccCHHhCeEEEEE
Confidence 22222222221 1123 899999999999999999
Q ss_pred EeeCCCCc-eeEEEEEEEecC
Q psy15734 255 AVNALGET-DGFIKVYVNLVD 274 (314)
Q Consensus 255 a~n~~g~~-~~~~~l~V~~~~ 274 (314)
|.|..|.. +..+.|.|..++
T Consensus 182 a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 182 ISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp EECTTCCEECCCEEECCC---
T ss_pred EecCCCcccCCceeeeEEeCC
Confidence 99999976 446666665543
No 112
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.88 E-value=2.7e-22 Score=167.33 Aligned_cols=214 Identities=17% Similarity=0.217 Sum_probs=129.4
Q ss_pred CcEEEEEEecCC-C-ceEEEEEEcCceeEEEeee--eeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCCCc
Q psy15734 37 KEALMACVVENL-R-EYKVAWVKMITQTILSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVPMT 112 (314)
Q Consensus 37 ~~~~l~C~~~~~-~-~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 112 (314)
+++.|.|.+.+. | .+.+.|++++ ..+..... .....++.+.+. ..|.|.+.+.+|+|.|+|.+.+....
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g-~~l~~~~~~~~~~~~~g~~~~~------s~l~i~~~~~~d~g~Y~C~a~n~~~~ 97 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDG-QVMDVDLSTASTTQEGELASTQ------SELTLSQKHWLSDRTYTCQVTYQGHT 97 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETT-EECCGGGEEEEEEEETTEEEEE------EEEEEEHHHHHTTCCEEEEEEETTEE
T ss_pred CcEEEEEEEeCeECCCeEEEEEECC-EEcccceecCCcCccCCcEEEE------EEEEEcHHHcCCCCcEEEEEEeCCCC
Confidence 699999999874 3 4799999954 43321100 001112222221 26888888888999999999875322
Q ss_pred ceeEEEEE-----EeCCceeeecCcceeEEecCceEEEEEEeccc-CCC---ceEEEcCCCceeec---------CCe--
Q psy15734 113 SQKGYLQV-----VVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP---YVAWRREDGKAINY---------NGE-- 172 (314)
Q Consensus 113 ~~~~~l~v-----~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p---~~~W~~~~~~~~~~---------~~~-- 172 (314)
....+.+ ...|.+...+ +....+.+|+.+.|.|.+.+. |.+ .+.|++.++..+.. ++.
T Consensus 98 -~~~~~~~~~~~~~~~p~v~~~~-p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~ 175 (323)
T 2wqr_A 98 -FEDSTKKCADSNPRGVSAYLSR-PSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLT 175 (323)
T ss_dssp -EEEEECCCCCSSGGGCEEEECC-CCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEE
T ss_pred -cceeeecCCCCCCCCCEEEEcC-CCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEE
Confidence 1112211 0123332222 233346789999999999886 566 89999954443321 111
Q ss_pred ----eC-------------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCC-c-eeEE
Q psy15734 173 ----LV-------------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPA-S-LNYW 209 (314)
Q Consensus 173 ----~~-------------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p-~~~W 209 (314)
+. +|.+.+.+.......|+.+.|.|.+.|.++ + .+.|
T Consensus 176 ~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W 255 (323)
T 2wqr_A 176 VTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQW 255 (323)
T ss_dssp EEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEE
Confidence 10 222222111111123999999999999544 3 7999
Q ss_pred ecCCCeeeecCCceee---eEe-eCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 210 TNEKGDMIITGDDYED---SRL-INGYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 210 ~~~~~~~~~~~~~~~~---~~~-~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
++++ ..+... .+.. ... ++.|...+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 256 ~k~g-~~l~~~-~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 256 LHNE-VQLPDA-RHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EETT-EECCGG-GEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EECC-EECCCC-ceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 9974 433222 1211 111 223667789999999999999999999998876
No 113
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.88 E-value=7.9e-21 Score=151.39 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=121.5
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeE---EEeeee----eeecCcCEEEEeCCceeEEEEEeee
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQTI---LSIHHK----VVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
.+..++..+.+.+|++++|.|. .+.+.+.+.|+|.+ +..+ ...... ......|+.+.......++|.|.++
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3456678899999999999999 67778899999952 1111 110000 0111346666543334558999999
Q ss_pred cCCCCeEEEEEEecCCC------cceeEEEEEEeCCc------------eeeecCcceeEEecCceEEEEEEecccCCCc
Q psy15734 95 QETDRGWYMCQINTVPM------TSQKGYLQVVVPPR------------ILLDRTSTDVVVREGTEVTLECSAVGYPEPY 156 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~p~------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~ 156 (314)
+.+|+|.|+|.+.+... ......|.|...+. +... +....+.+|+.++|.|.+.+.|.+.
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~p~~~ 158 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS--PQSLTVWEGETAILNCSYENSAFDY 158 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE--CSEEEEETTSCEEEEEECCCTTCCE
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc--CceEEEeCCCeEEEEEEEecCCCCc
Confidence 99999999999976421 11234677766542 2222 3566788999999999999888899
Q ss_pred eEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEE
Q psy15734 157 VAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHM 236 (314)
Q Consensus 157 ~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s 236 (314)
+.|++.+... ....+.+...+. ......++.+...... ...
T Consensus 159 i~W~k~~~~~------------------------------------~~~~~~~~~~~~-~~~~~~r~~~~~~~~~--~~~ 199 (238)
T 2p1y_A 159 FPWYQQFPGE------------------------------------GPALLISILSVS-DKKEDGRFTIFFNKRE--KKL 199 (238)
T ss_dssp EEEEEECTTS------------------------------------CCEEEEEEETTC-SEEEETTEEEEEETTT--TEE
T ss_pred EEEEEECCCC------------------------------------CCEEEEEEccCC-CcccCCceEEEecCCC--CeE
Confidence 9999842110 000111111111 1111223332211111 134
Q ss_pred EEEEeecCCCCCeEEEEEEeeCC
Q psy15734 237 TLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 237 ~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
+|.|.+++.+|+|.|+|.|.|..
T Consensus 200 ~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 200 SLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEETTCCGGGCEEEEEEEEETT
T ss_pred EEEEcCCCHHHCEEEEEEEeeCC
Confidence 89999999999999999999974
No 114
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.88 E-value=8.4e-22 Score=154.29 Aligned_cols=181 Identities=20% Similarity=0.255 Sum_probs=112.6
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-cee--EEEee--eeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQT--ILSIH--HKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
|.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+ +.. ..... ......+.|+.+... ...++|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGS-GTDFTLTISDLEC 80 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEECSCCG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecC-CCEEEEEECCCCh
Confidence 56667788899999999999999998888999999953 111 11110 000112456666533 2345899999999
Q ss_pred CCCeEEEEEEecCCC----cceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecc-cCCCceEEEcCCCceee
Q psy15734 97 TDRGWYMCQINTVPM----TSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEPYVAWRREDGKAIN 168 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~----~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~~~W~~~~~~~~~ 168 (314)
+|+|.|+|.+.+... ......|.|.. +|.+.... ....+.+|+.+.|.|.+.+ .|.|.+.|++ ++..+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFP--PSADLVATGTVTIVCVANKYFPDVTVTWEV-DGTTQT 157 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEEC--CCHHHHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECC
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeC--CchhhccCCcEeEEEEEecccCCcEEEEEe-CCccCC
Confidence 999999999976432 22334555533 33333322 1122345667777777766 5666777776 333221
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeee-EeeCCeeeEEEEEEeecCC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDS-RLINGYSCHMTLKIRSILS 245 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~-~~~~~~~~~s~L~i~~~~~ 245 (314)
... ..... ...+.|...+.|.|.++..
T Consensus 158 --------------------------------------------------~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 187 (213)
T 3nl4_L 158 --------------------------------------------------TGIENSKTPQNSADCTYNLSSTLTLTSTEY 187 (213)
T ss_dssp --------------------------------------------------SSEEEEECCCCTTTCCEEEEEEEEEEHHHH
T ss_pred --------------------------------------------------CCeecccCcccCCCCeEEEEEEEEecHHHc
Confidence 000 00000 0112244456999999999
Q ss_pred CCCeEEEEEEe
Q psy15734 246 HQFGSYRCVAV 256 (314)
Q Consensus 246 ~d~G~Y~C~a~ 256 (314)
+|+|.|+|.|.
T Consensus 188 ~d~g~Y~C~a~ 198 (213)
T 3nl4_L 188 NSHKEYTCKVT 198 (213)
T ss_dssp HTCCEEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 99999999998
No 115
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.88 E-value=3.1e-22 Score=174.94 Aligned_cols=232 Identities=15% Similarity=0.195 Sum_probs=138.8
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCC-Cc-eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENL-RE-YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+|.+...+....+.+|+.+.|.|.+.+. |. +.+.|++++..............++++... ..|.|.+++.+|
T Consensus 132 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~------s~L~i~~~~~~d 205 (457)
T 1hzh_H 132 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS------SVVTVPSSSLGT 205 (457)
T ss_dssp CCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEE------EEEEECSGGGGT
T ss_pred CCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEE------EEEEecccccCC
Confidence 5555443333446899999999999875 53 799999855321111111112233343332 279999999999
Q ss_pred CeEEEEEEecCCCc-ceeEEEEEE-----------------eCCceeeecCcceeEEecCceEEEEEEecccCCC----c
Q psy15734 99 RGWYMCQINTVPMT-SQKGYLQVV-----------------VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP----Y 156 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~-~~~~~l~v~-----------------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p----~ 156 (314)
|.|+|.+.+.... .....+.+. .+|.+...+......+.+|+.+.|.|.+.|.|++ .
T Consensus 206 -G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~ 284 (457)
T 1hzh_H 206 -QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVK 284 (457)
T ss_dssp -SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCE
T ss_pred -ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceE
Confidence 9999999775322 222222221 1344322221111125679999999999987543 8
Q ss_pred eEEEcCCCceeec----------CCe-------------------eC------------------------CCeEEcCC-
Q psy15734 157 VAWRREDGKAINY----------NGE-------------------LV------------------------PPMLTIPN- 182 (314)
Q Consensus 157 ~~W~~~~~~~~~~----------~~~-------------------~~------------------------~p~~~~~~- 182 (314)
+.|++ ++..+.. ++. +. +|.+.+.+
T Consensus 285 i~W~k-~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~ 363 (457)
T 1hzh_H 285 FNWYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPP 363 (457)
T ss_dssp EEEEE-TTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECC
T ss_pred EEEEe-CCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECC
Confidence 99999 5543311 110 00 33333322
Q ss_pred CcceeecCccEEEEEEEeecCCc--eeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 183 QLEGAFVSQTVELHCHTEAFPAS--LNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p~p--~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
....+..|+ +.|.|.+.|.|++ .+.|++++ ..+............++ |...+.|.|.....+|+|.|+|.|.|..
T Consensus 364 ~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g-~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~ 441 (457)
T 1hzh_H 364 SRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNG-QPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 441 (457)
T ss_dssp CGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETT-EECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CccccCCCc-EEEEEEEEeEECCCCEEEEEECC-EECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECC
Confidence 222344555 9999999997654 89999974 43322222222222333 6666788898888889999999999986
Q ss_pred CCc
Q psy15734 260 GET 262 (314)
Q Consensus 260 g~~ 262 (314)
...
T Consensus 442 l~~ 444 (457)
T 1hzh_H 442 LHN 444 (457)
T ss_dssp SGG
T ss_pred CCC
Confidence 543
No 116
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.88 E-value=6.5e-22 Score=155.35 Aligned_cols=191 Identities=14% Similarity=0.167 Sum_probs=113.0
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeE--EEEEeee
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSW--FLHLRDV 94 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~ 94 (314)
....+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++.. +... . + .. ....... .|.|.++
T Consensus 5 ~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~-~~~~-------~-~-~~-~~~~~~~~~~L~I~~v 71 (218)
T 1uct_A 5 GDFPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNS-TYRE-------I-G-RR-LKFWNETDPEFVIDHM 71 (218)
T ss_dssp GGSCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETT-EEEE-------C-S-EE-CC----CCCEEEECSC
T ss_pred CCCCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCc-cccc-------c-c-cc-CCCCcceeeEEEEccc
Confidence 3456788887776 57999999999999977 5779999996543 2110 0 0 00 0001122 6999999
Q ss_pred cCCCCeEEEEEEecCCC---cceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceee
Q psy15734 95 QETDRGWYMCQINTVPM---TSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~---~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~ 168 (314)
+.+|+|.|+|.+.+... .+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|++ ++..
T Consensus 72 ~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p---~~~v~~G~~v~L~C~~~~~~~~~~~W~k-~g~~-- 145 (218)
T 1uct_A 72 DANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR---GLVLMPGENISLTCSSAHIPFDRFSLAK-EGEL-- 145 (218)
T ss_dssp CGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS---CSEECTTCCCEEEEECSSSCCSEEEEEE-TTCS--
T ss_pred ccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC---CCccCCCCCEEEEEeCCCCCCCEEEEEE-CCCc--
Confidence 99999999999977422 23345566654 23332221 2355677777777755555556666666 3221
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
.. . . . .....+ ..|.|.+++.+|+
T Consensus 146 -----------------------------------------------~~-~-~-~-~~~~~~-----~~L~I~~v~~~D~ 169 (218)
T 1uct_A 146 -----------------------------------------------SL-P-Q-H-QSGEHP-----ANFSLGPVDLNVS 169 (218)
T ss_dssp -----------------------------------------------SC-C-S-E-EECSSS-----EEEECCSCCGGGC
T ss_pred -----------------------------------------------cc-c-c-c-cCCCcc-----CEEEEccCCcccC
Confidence 11 0 0 0 000111 3899999999999
Q ss_pred eEEEEEEeeCCC-----CceeEEEEEEEecCCCeeEEEE
Q psy15734 249 GSYRCVAVNALG-----ETDGFIKVYVNLVDGDIFQIRK 282 (314)
Q Consensus 249 G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~ 282 (314)
|.|+|.|.|... ..+..+.|.|........+..+
T Consensus 170 G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~~~~~t~~n 208 (218)
T 1uct_A 170 GIYRCYGWYNRSPYLWSFPSNALELVVTDSIHQDYTTQN 208 (218)
T ss_dssp EEEEEEEECTTSTTEECCCCCCEEEEEC-----------
T ss_pred EEEEEEEEcCCCCCcCCCCCCcEEEEEecCCCcCCChhh
Confidence 999999998642 3455677777765444444333
No 117
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.88 E-value=6.1e-22 Score=160.66 Aligned_cols=218 Identities=20% Similarity=0.250 Sum_probs=126.1
Q ss_pred CceecCCcceEEEcCCcEEEEEEec---CCCceEEEEEEcCcee----E-EEeeeee----eecCcCEEEEeC-CceeEE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVE---NLREYKVAWVKMITQT----I-LSIHHKV----VTQNKRVSITFN-DHRSWF 88 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~---~~~~~~v~W~~~~~~~----~-~~~~~~~----~~~~~~~~~~~~-~~~~~~ 88 (314)
+.+..++..+.+.+|+++.|.|.+. +.+.+.+.|++.+... + ....... .....|+.+..+ ...+++
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4566677789999999999999997 6677899999965421 1 1100000 011245554321 123357
Q ss_pred EEEeeecCCCCeEEEEEEecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe---cccCCCceEEEcCCC
Q psy15734 89 LHLRDVQETDRGWYMCQINTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA---VGYPEPYVAWRREDG 164 (314)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~---~~~p~p~~~W~~~~~ 164 (314)
|.|.+++.+|+|.|+|.+.+.. .......+.+.+.+. .+....+.+|+.+.|.|.+ .+.|.|.+.|++.++
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-----~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~ 160 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE-----EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSG 160 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC-----CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECT
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc-----CCCccccccCCcEEEEEEecCCCCCCccceEEEecCC
Confidence 9999999999999999997642 222333333333221 2346678899999999999 567889999998443
Q ss_pred ceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee--eeEeeCCeeeEEEEEEee
Q psy15734 165 KAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE--DSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~--~~~~~~~~~~~s~L~i~~ 242 (314)
.... +...+.. ..+.+. . ......++. +....+.......|.|.+
T Consensus 161 ~~~~----------------------~~~~~~~-~~~~~~--~--------~~~~~~~~~~r~~~~~~~~~~~~~L~i~~ 207 (268)
T 3mj6_A 161 SHTE----------------------EETVLSY-DSNMRS--G--------KFQSLGRFRNRVDLTGDISRNDGSIKLQT 207 (268)
T ss_dssp TCSS----------------------CEEEEEE-ETTSSS--C--------EEECSSTTTTTEEECSCGGGTBCCEEECS
T ss_pred CCCc----------------------ceeEEEe-cCCCCc--c--------ccccccccccceEeeccCCCCeEEEEECc
Confidence 2210 0000000 000000 0 000011110 000000000123899999
Q ss_pred cCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCe
Q psy15734 243 ILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDI 277 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 277 (314)
+..+|+|.|+|.|.|..|.....+.|.|...+...
T Consensus 208 v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~ 242 (268)
T 3mj6_A 208 VKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQR 242 (268)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECC----
T ss_pred CChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCee
Confidence 99999999999999999988899999886655433
No 118
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.88 E-value=1.4e-21 Score=147.48 Aligned_cols=163 Identities=15% Similarity=0.185 Sum_probs=112.7
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCC-ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLR-EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+|.+...+..+.+.+|+++.|.|.+.+.+ .+.+.|++++ ..+ ..+. ..+.|.+++.+|+
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g-~~~--------~~~~-----------~~~~~~~~~~~d~ 63 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNG-NLI--------PTHT-----------QPSYRFKANNNDS 63 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETT-EEC--------TTCC-----------SSEEEEECCGGGC
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECC-eEc--------ccCc-----------cceEEEecccccC
Confidence 46666677788899999999999998875 5799999954 322 1111 1477889999999
Q ss_pred eEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCCeeCCCeE
Q psy15734 100 GWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNGELVPPML 178 (314)
Q Consensus 100 G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~~~~~p~~ 178 (314)
|.|+|.+.+ ...+..+.|.|..++.+... ....+.+|+.+.|.|.+. +.|.+.+.|++ ++
T Consensus 64 G~Y~C~~~~-~~~s~~~~l~v~~~~~~~~~---~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g-------------- 124 (170)
T 3ry4_A 64 GEYTCQTGQ-TSLSDPVHLTVLFEWLVLQT---PHLEFQEGETIMLRCHSWKDKPLVKVTFFQ-NG-------------- 124 (170)
T ss_dssp EEEEEEETT-SBCCCCEEEEEECCSEEEEC---SCSEECTTCCEEEEEEEGGGCCEEEEEEEE-TT--------------
T ss_pred eEEEEEEeC-CCceEeEEEEEECCceEecC---CCceeecCCeEEEEEECCCCCCCceEEEEE-CC--------------
Confidence 999999965 33445567777766544332 234566777777777774 33556677776 32
Q ss_pred EcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeC
Q psy15734 179 TIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNA 258 (314)
Q Consensus 179 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 258 (314)
..+... ..+. .|.|.++..+|+|.|+|.|.|.
T Consensus 125 ------------------------------------~~~~~~-------~~~~-----~L~i~~v~~~d~G~Y~C~a~n~ 156 (170)
T 3ry4_A 125 ------------------------------------KSQKFS-------HLDP-----TFSIPQANHSHSGDYHCTGNIG 156 (170)
T ss_dssp ------------------------------------EEEEEE-------SSCC-----EEEESSCCGGGCEEEEEEEEET
T ss_pred ------------------------------------eEcccc-------CCCC-----eEEEEeccccCCEEEEEEEEeC
Confidence 211110 0112 8999999999999999999999
Q ss_pred CCC-ceeEEEEEE
Q psy15734 259 LGE-TDGFIKVYV 270 (314)
Q Consensus 259 ~g~-~~~~~~l~V 270 (314)
.|. .+..+.|.|
T Consensus 157 ~g~~~s~~~~l~V 169 (170)
T 3ry4_A 157 YTLFSSKPVTITV 169 (170)
T ss_dssp TEEEECCCEEEEE
T ss_pred cCccccccEEEEE
Confidence 986 455666655
No 119
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.88 E-value=1.5e-21 Score=152.89 Aligned_cols=189 Identities=16% Similarity=0.203 Sum_probs=117.9
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc---eeEEEe--eeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT---QTILSI--HHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
|.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+. ...... .........|+.+... ...++|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~ 80 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGS-GRDSSFTISSLES 80 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEecc-CCEEEEEECCCCc
Confidence 566677888999999999999999988889999998431 111111 0011112456666532 2345899999999
Q ss_pred CCCeEEEEEEecCC--CcceeEEEEE---EeCCceeeecCcceeEEecCceEEEEEEecccCC--CceEEEcCCCceeec
Q psy15734 97 TDRGWYMCQINTVP--MTSQKGYLQV---VVPPRILLDRTSTDVVVREGTEVTLECSAVGYPE--PYVAWRREDGKAINY 169 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~--~~~~~~~l~v---~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p~~~W~~~~~~~~~~ 169 (314)
+|+|.|+|.+.+.. .......|.| ..+|.+...+ ....+..|+.+.|.|.+.+.++ +.+.|++ ++..+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~- 156 (213)
T 3r06_A 81 EDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFP--PSSEQLGTGSATLVCFVNNFYPKDINVKWKV-DGSEKR- 156 (213)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSSCEEEEEEE-TTEEEC-
T ss_pred ccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeC--CCceecCCCCcEEEEEEeeecCCceEEEEEE-CCcccC-
Confidence 99999999996542 1233345666 3345444432 1222335666777777776543 2677777 443321
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeE-eeCCeeeEEEEEEeecCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSR-LINGYSCHMTLKIRSILSH 246 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~L~i~~~~~~ 246 (314)
.. ....... ..+.|...+.|.|.....+
T Consensus 157 -------------------------------------------------~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~ 187 (213)
T 3r06_A 157 -------------------------------------------------DGVLQSVTDQDSKDSTYSLSSTLSLTKADYE 187 (213)
T ss_dssp -------------------------------------------------TTEEEEECCCCTTTCCEEEEEEEEEEHHHHH
T ss_pred -------------------------------------------------CceEeccCceeCCCCcEEEEEEEEeCHHHhc
Confidence 10 0000001 1122445568999999999
Q ss_pred CCeEEEEEEeeCCCCcee
Q psy15734 247 QFGSYRCVAVNALGETDG 264 (314)
Q Consensus 247 d~G~Y~C~a~n~~g~~~~ 264 (314)
|+|.|+|.|.|.......
T Consensus 188 d~g~YtC~v~n~~~~~~~ 205 (213)
T 3r06_A 188 RHNLYTCEVTHKTSTAAI 205 (213)
T ss_dssp TCCEEEEEEEETTCSSCE
T ss_pred cCCeEEEEEEecccCcce
Confidence 999999999998755443
No 120
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.88 E-value=2.6e-21 Score=151.45 Aligned_cols=191 Identities=17% Similarity=0.245 Sum_probs=115.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-eeEE--Eeee--eeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QTIL--SIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+..++..+.+.+|+++.|.|.+.+.+.+.+.|++.+. ..+. .... .......++.+.... ..+.|.|.+++.+|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG-TDFTLSINSVETED 82 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET-TEEEEEESSCCGGG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC-CEEEEEECCCChhh
Confidence 4556778999999999999999988778899998542 2111 1000 001112466665422 34489999999999
Q ss_pred CeEEEEEEecCCCc--ceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTVPMT--SQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~~~~~~~~~~~ 171 (314)
+|.|+|.+.+.... .....|.|.. +|.+..... ......|+.+.|.|.+.+ .|.+ .+.|++ ++..+....
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~~ 159 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSERQNGV 159 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTTE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECC--ChhhcCCCcEEEEEEEeeecCCceEEEEEc-CCCcCccee
Confidence 99999999764321 2223566654 444443321 111235667777777766 3444 677777 443321000
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-eeCCeeeEEEEEEeecCCCCCeE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-LINGYSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~ 250 (314)
. ....... .++.|...+.|.|.++..+|+|.
T Consensus 160 --------------------------------------------~----~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 191 (213)
T 3d9a_L 160 --------------------------------------------L----NSWTDQDSKDSTYSMSSTLTLTKDEYERHNS 191 (213)
T ss_dssp --------------------------------------------E----EEECCCCTTTCCEEEEEEEEEEHHHHHHCCE
T ss_pred --------------------------------------------e----ecCCCccCCCCCEEEEEEEEEeccccCCCCE
Confidence 0 0000000 11124445699999999999999
Q ss_pred EEEEEeeCCCCceeEE
Q psy15734 251 YRCVAVNALGETDGFI 266 (314)
Q Consensus 251 Y~C~a~n~~g~~~~~~ 266 (314)
|+|.|.|.........
T Consensus 192 Y~C~a~n~~~~~~~~~ 207 (213)
T 3d9a_L 192 YTCEATHKTSTSPIVK 207 (213)
T ss_dssp EEEEEECTTCSSCEEE
T ss_pred EEEEEEEccCCCceEE
Confidence 9999999876654333
No 121
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.87 E-value=5e-21 Score=146.93 Aligned_cols=176 Identities=13% Similarity=0.112 Sum_probs=112.2
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+.. .+.+|++++|.|.+.+ +...+.|+|++ ..+... ... . ......+.|.|.+++.+|+
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g-~~~~~~-----~~~-~----~~~~~~~~L~I~~v~~~D~ 69 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEG-SLFAVD-----RPK-P----PERINKVKFYIPDMNSRMA 69 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETT-EEEEEE-----CCS-S----CTTCCEEEEEESSCCGGGC
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECC-Cccccc-----ccc-c----CCCcceeEEEeCcCCcccC
Confidence 46777777766 7999999999999976 44689999954 332210 000 0 0111234799999999999
Q ss_pred eEEEEEEecCC---CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee
Q psy15734 100 GWYMCQINTVP---MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL 173 (314)
Q Consensus 100 G~Y~C~~~~~~---~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~ 173 (314)
|.|+|.+.+.. ..+..+.|.|.. +|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|++ ++..
T Consensus 70 G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~------- 137 (188)
T 1oll_A 70 GQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDT-ATSMFLLLK-EGRS------- 137 (188)
T ss_dssp EEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEES---CSEEETTCEEEEEEECSS-SCSEEEEEE-ESSS-------
T ss_pred eEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECC---CCccccCCEEEEEEEcCC-CCCEEEEEE-CCcc-------
Confidence 99999997642 224456666654 34443322 334677888888887654 345677776 3221
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
... ... .... ...|.|.+++.+|+|.|+|
T Consensus 138 ------------------------------------------~~~---~~~-~~~~-----~~~L~I~~v~~~d~G~Y~C 166 (188)
T 1oll_A 138 ------------------------------------------SHV---QRG-YGKV-----QAEFPLGPVTTAHRGTYRC 166 (188)
T ss_dssp ------------------------------------------CEE---EEE-ECSS-----EEEEEEEECCGGGCEEEEE
T ss_pred ------------------------------------------ccc---ccc-CCCc-----eeEEEECCCCcCCCcEEEE
Confidence 111 000 0001 2399999999999999999
Q ss_pred EEeeCC---CCceeEEEEEEE
Q psy15734 254 VAVNAL---GETDGFIKVYVN 271 (314)
Q Consensus 254 ~a~n~~---g~~~~~~~l~V~ 271 (314)
.|.|.. ...+..+.|.|.
T Consensus 167 ~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 167 FGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp ECEEETTEECCCCCCEEEEEE
T ss_pred EEEcCCCcCCCCCCcEEEEec
Confidence 999875 233455666654
No 122
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.87 E-value=9.4e-22 Score=153.80 Aligned_cols=188 Identities=16% Similarity=0.233 Sum_probs=115.6
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeE--EEeeee--eeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQTI--LSIHHK--VVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
|.+..++ .+.+.+|++++|.|.+. +.+.+.|++.+ +..+ ...... ......|+.+... ...++|.|.+++.
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~ 77 (211)
T 3tv3_L 2 SALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKS-GNTASLTVSGLQT 77 (211)
T ss_dssp -CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEEESCCG
T ss_pred ceEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEcc-CCEEEEEECCCCh
Confidence 3455566 88999999999999998 77899999952 1111 110000 0012346665542 3345899999999
Q ss_pred CCCeEEEEEEecCCC---cceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEecccC--CCceEEEcCCCcee
Q psy15734 97 TDRGWYMCQINTVPM---TSQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGYP--EPYVAWRREDGKAI 167 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~---~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~W~~~~~~~~ 167 (314)
+|+|.|+|.+.+... ......|.|. .+|.+...+ ....+.+|+.+.|.|.+.+.+ .+.+.|++ ++..+
T Consensus 78 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l 154 (211)
T 3tv3_L 78 DDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFP--PSSEELQANKATLVCLISDFYPGAVTVAWKA-DSSPV 154 (211)
T ss_dssp GGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEEC--CCHHHHHTTCEEEEEEEEEEBSSCCEEEEEE-TTEEE
T ss_pred hHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecC--CchhhhcCCCeEEEEEeeeecCCCeEEEEEE-CCeec
Confidence 999999999976543 3344566666 344444332 111223567777777766642 35666766 43332
Q ss_pred ecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eee-EeeCCeeeEEEEEEeecCC
Q psy15734 168 NYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDS-RLINGYSCHMTLKIRSILS 245 (314)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~-~~~~~~~~~s~L~i~~~~~ 245 (314)
. ..... ... ...+.|...+.|.|.++..
T Consensus 155 ~--------------------------------------------------~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 184 (211)
T 3tv3_L 155 K--------------------------------------------------AGVETTTPSKQSNNKYAASSYLSLTPEQW 184 (211)
T ss_dssp C--------------------------------------------------TTEEECCCEECTTSSEEEEEEEEECHHHH
T ss_pred C--------------------------------------------------CCcccCCceECCCCCEEEEEEEEEcHHHh
Confidence 1 10000 000 1112244556899999999
Q ss_pred CCCeEEEEEEeeCCCCceeEE
Q psy15734 246 HQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
+|+|.|+|.|.|..+...+++
T Consensus 185 ~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 185 KSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp HHSSCEEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEEECCCCEEeec
Confidence 999999999999987655554
No 123
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.87 E-value=2.6e-21 Score=152.18 Aligned_cols=85 Identities=14% Similarity=0.293 Sum_probs=58.8
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEEEeee-------e--eeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTILSIHH-------K--VVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~~~~~-------~--~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|++ +..+..... . ......|+.+..+. ...++|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQIN 84 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEEC
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEEC
Confidence 345577899999999999998754 6899999964 322211100 0 01124577766432 234689999
Q ss_pred eecCCCCeEEEEEEecCC
Q psy15734 93 DVQETDRGWYMCQINTVP 110 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~ 110 (314)
+++.+|+|.|+|.+.+..
T Consensus 85 ~v~~~D~G~Y~C~~~~~~ 102 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTI 102 (219)
T ss_dssp SCCGGGCEEEEEEEEETT
T ss_pred CCCcccCEEEEEEEeccC
Confidence 999999999999997653
No 124
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.87 E-value=1.5e-20 Score=151.49 Aligned_cols=204 Identities=16% Similarity=0.255 Sum_probs=125.6
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-eeE---EEee------eeeeecCcCEEEEeC-CceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QTI---LSIH------HKVVTQNKRVSITFN-DHRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. ..+ .... ........|+.+..+ ....++|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 345678899999999999998764 57999999532 211 1100 000112467777654 2345689999
Q ss_pred eecCCCCeEEEEEEecCCC------cceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC-----ceEEEc
Q psy15734 93 DVQETDRGWYMCQINTVPM------TSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP-----YVAWRR 161 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-----~~~W~~ 161 (314)
+++.+|+|.|.|.+.+... ......|.|..+|.+... +....+.+|++++|.|.+.+.|.+ .+.|++
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQT--PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEE--CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEec--CcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 9999999999999976522 122356777666655443 356678899999999999888664 899998
Q ss_pred CC-CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEE
Q psy15734 162 ED-GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 162 ~~-~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i 240 (314)
.. +..+ .+ ..+...........++..... . ...+|.|
T Consensus 163 ~~~g~~~--------------------------~~------------~~~~~~~~~~~~~~r~~~~~~-~---~~~~L~I 200 (256)
T 1nqb_A 163 QKPGQSP--------------------------KL------------LIYKVSNRFSGVPDRFSGSGS-G---TDFTLKI 200 (256)
T ss_dssp ECTTSCE--------------------------EE------------EEETTTEECTTCCTTEEEEEE-T---TEEEEEE
T ss_pred ECCCCCc--------------------------EE------------EEEEeCCCCCccCCcEEEEcc-C---CEEEEEE
Confidence 31 1110 00 000000000000122222111 1 1348999
Q ss_pred eecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec
Q psy15734 241 RSILSHQFGSYRCVAVNALGET-DGFIKVYVNLV 273 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 273 (314)
.+++.+|+|.|+|.|.|..... .....|.|...
T Consensus 201 ~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 201 SRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred CCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 9999999999999999854322 23445666543
No 125
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.87 E-value=2.8e-21 Score=153.85 Aligned_cols=196 Identities=15% Similarity=0.199 Sum_probs=119.7
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e--e-EEEe-eeeeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q--T-ILSI-HHKVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~--~-~~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
..+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+. . . +... .......+.|+..... ...++|.|.++
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v 101 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS-GTDFTLTISSL 101 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSC
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcC-CCEEEEEECCC
Confidence 34566777888999999999999999888888999999531 1 1 1111 0111122456666532 23458999999
Q ss_pred cCCCCeEEEEEEecCCC--cceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEeccc-C-CCceEEEcCCCcee
Q psy15734 95 QETDRGWYMCQINTVPM--TSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGY-P-EPYVAWRREDGKAI 167 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~~~W~~~~~~~~ 167 (314)
+.+|+|.|+|.+.+... ......|.|.. +|.+.... ....+.+|+.+.|.|.+.+. | .+.+.|++ ++..+
T Consensus 102 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k-~g~~~ 178 (237)
T 3sob_L 102 QPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFP--PSDEQLKSGTASVVCLLNNFYPREAKVQWKV-DNALQ 178 (237)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEEC--CCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred ChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeC--CChhhccCCceEEEEEEcccCCCceEEEEEE-CCCCC
Confidence 99999999999965432 22334555533 34443322 11123346677777777763 4 46777777 44332
Q ss_pred ecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-eeCCeeeEEEEEEeecCCC
Q psy15734 168 NYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-LINGYSCHMTLKIRSILSH 246 (314)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~ 246 (314)
... .. ....... .++.|...+.|.|.....+
T Consensus 179 ~~~--------------------------------------------~~----~~~~~~~~~~g~~~~~s~L~i~~~~~~ 210 (237)
T 3sob_L 179 SGN--------------------------------------------SQ----ESVTEQDSKDSTYSLSSTLTLSKADYE 210 (237)
T ss_dssp CSS--------------------------------------------EE----EEECCCCTTTCCEEEEEEEEEEHHHHT
T ss_pred CCc--------------------------------------------ee----ecccccccCCCcEEEEEEEEEcHHHcc
Confidence 100 00 0000001 1112444568999999999
Q ss_pred CCeEEEEEEeeCCCCceeEEE
Q psy15734 247 QFGSYRCVAVNALGETDGFIK 267 (314)
Q Consensus 247 d~G~Y~C~a~n~~g~~~~~~~ 267 (314)
|+|.|+|.|.|..........
T Consensus 211 d~g~Y~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 211 KHKVYACEVTHQGLSSPVTKS 231 (237)
T ss_dssp TCCEEEEEEECTTCSSCEEEE
T ss_pred CCCcEEEEEeeCCCCCceeee
Confidence 999999999998865544433
No 126
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.87 E-value=2.5e-21 Score=148.08 Aligned_cols=158 Identities=16% Similarity=0.203 Sum_probs=102.8
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
...+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++... .. ..+.|.|.+++.+
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-----------------~~---~~~~L~i~~v~~~ 62 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-----------------YQ---DQAVLFIPAMKRS 62 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC-----------------EE---SSSEEEESSCCGG
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc-----------------cC---cccEEEECcCChh
Confidence 3467777777765 7999999999999987 67899999965320 00 1127999999999
Q ss_pred CCeEEEEEEecCC---CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC
Q psy15734 98 DRGWYMCQINTVP---MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG 171 (314)
Q Consensus 98 d~G~Y~C~~~~~~---~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~ 171 (314)
|+|.|+|.+.+.. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+.+.| +.+.|++ ++
T Consensus 63 D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p---~~~v~~G~~v~l~C~~~~~~-~~~~w~k-~g------- 130 (184)
T 2gi7_A 63 LAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP---GPAVSSGGDVTLQCQTRYGF-DQFALYK-EG------- 130 (184)
T ss_dssp GCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC---CCSSCCTTCEEEEEECSSCC-CEEEEEE-CC-------
T ss_pred hCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC---CceecCCCcEEEEEEcCCCC-cEEEEEE-CC-------
Confidence 9999999997643 223445566643 23333222 22345666666666654432 4566665 22
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
.... .... ... ....|.|.+++.+|+|.|
T Consensus 131 ------------------------------------------~~~~-~~~~---~~~-----~~~~L~i~~v~~~D~G~Y 159 (184)
T 2gi7_A 131 ------------------------------------------DPAP-YKNP---ERW-----YRASFPIITVTAAHSGTY 159 (184)
T ss_dssp ------------------------------------------CCTT-SCCC---CEE-----EEESSSEEEETTCCSEEE
T ss_pred ------------------------------------------CcCc-ceec---CCC-----ceEEEEEccCCccCCeEE
Confidence 2111 1000 001 123899999999999999
Q ss_pred EEEEeeCCC
Q psy15734 252 RCVAVNALG 260 (314)
Q Consensus 252 ~C~a~n~~g 260 (314)
+|.|.|..+
T Consensus 160 ~C~a~n~~~ 168 (184)
T 2gi7_A 160 RCYSFSSRD 168 (184)
T ss_dssp EEEEECTTS
T ss_pred EEEEEeCCC
Confidence 999999764
No 127
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.87 E-value=2.3e-20 Score=150.39 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=94.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCC--CceEEEEEEcC-ce---eEEEee------eeeeecCcCEEEEeCC-ce
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENL--REYKVAWVKMI-TQ---TILSIH------HKVVTQNKRVSITFND-HR 85 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~-~~---~~~~~~------~~~~~~~~~~~~~~~~-~~ 85 (314)
..+|.+..++..+.+.+|++++|.|.+.+. +.+.+.|+|.. +. .+.... ........|+.+..+. ..
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 456778888999999999999999999873 56899999853 11 111111 0011123577776432 34
Q ss_pred eEEEEEeeecCCCCeEEEEEEecC-------------CCcceeEEEEEEeCC---------------ceeeecCcceeEE
Q psy15734 86 SWFLHLRDVQETDRGWYMCQINTV-------------PMTSQKGYLQVVVPP---------------RILLDRTSTDVVV 137 (314)
Q Consensus 86 ~~~L~i~~~~~~d~G~Y~C~~~~~-------------~~~~~~~~l~v~~~p---------------~~~~~~~~~~~~~ 137 (314)
.++|.|.+++.+|+|.|.|.+.+. ........|.|..++ .+... +....+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v 161 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA--PGTLSL 161 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEE--CSEEEE
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEec--CCeEEE
Confidence 568999999999999999999664 112234456766532 22222 456677
Q ss_pred ecCceEEEEEEecccCC-CceEEEc
Q psy15734 138 REGTEVTLECSAVGYPE-PYVAWRR 161 (314)
Q Consensus 138 ~~g~~~~l~C~~~~~p~-p~~~W~~ 161 (314)
.+|++++|.|.+.+.+. +.+.|++
T Consensus 162 ~~G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 162 SPGERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp CTTSCEEEEEEESSCCTTCCEEEEE
T ss_pred eCCCCEEEEEEECCCcCCeeEEEEE
Confidence 88888888888887765 7888887
No 128
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.87 E-value=1.3e-21 Score=148.49 Aligned_cols=164 Identities=13% Similarity=0.132 Sum_probs=102.5
Q ss_pred cceEEEcCCcEEEEEEecC--CCceEEEEEEcCceeEEEeee--eeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEE
Q psy15734 29 ANVTATVGKEALMACVVEN--LREYKVAWVKMITQTILSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMC 104 (314)
Q Consensus 29 ~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (314)
..+.+.+|++++|.|...+ .+.+.+.|+|++ ..+..... .....+.|+.+..+ ++|.|.+++.+|+|.|+|
T Consensus 4 ~~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~-~~i~~~~~~~~~~~~~~r~~~~~~----gsL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 4 GTVWGALGHGINLNIPNFQMTDDIDEVRWERGS-TLVAEFKRKMKPFLKSGAFEILAN----GDLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEEEETTSCEEECCTTCCCCTTEEEEEEEETT-EEEEEEETTSCCEESSTTEEECTT----SCEEESSCCGGGCEEEEE
T ss_pred eEEEEEcCCcEEEcCCCCCcccccccEEEEeCC-ceeEEEcCCCeecCCCCeEEECCC----CcEEEcccccccCEEEEE
Confidence 3577899999999995433 456799999955 33321110 11223567666433 269999999999999999
Q ss_pred EEecCC-Cc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEcC
Q psy15734 105 QINTVP-MT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTIP 181 (314)
Q Consensus 105 ~~~~~~-~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~~ 181 (314)
.+.+.. .. ...+.|.|..++... .. ...+..+.|.|.+.+.|.|.+.|++
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~~~~~p------~i-~~~~~~v~L~C~~~g~p~p~i~W~~-------------------- 131 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILEMVSKP------MI-YWECSNATLTCEVLEGTDVELKLYQ-------------------- 131 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEECCCCCC------EE-EEETTTTEEEEECSSCSSCEEEEEE--------------------
T ss_pred EEEeCCCCEEEEEEEEEEEeCCCCCC------EE-EecCCcEEEEEEecCCCCcEEEEEE--------------------
Confidence 997653 32 444566666532110 01 1122335556655555555555555
Q ss_pred CCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
+ +..+.... .+.|..+..+|+|.|+|.|.|..|.
T Consensus 132 ------------------------------~-g~~l~~~~---------------~~~i~~~~~~d~G~Y~C~a~N~~g~ 165 (176)
T 1hng_A 132 ------------------------------G-KEHLRSLR---------------QKTMSYQWTNLRAPFKCKAVNRVSQ 165 (176)
T ss_dssp ------------------------------T-TEEEEEES---------------SSEEEEECSCCSSCEEEEEEETTEE
T ss_pred ------------------------------C-CEECCCCC---------------cEEEEEEEccCCeEEEEEEEecCCC
Confidence 3 32222211 2344477799999999999999998
Q ss_pred ceeEEEEEE
Q psy15734 262 TDGFIKVYV 270 (314)
Q Consensus 262 ~~~~~~l~V 270 (314)
..+...|.+
T Consensus 166 ~~~~~~l~~ 174 (176)
T 1hng_A 166 ESEMEVVNC 174 (176)
T ss_dssp EEEEECCCC
T ss_pred ceecccccC
Confidence 888776644
No 129
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.87 E-value=7.2e-21 Score=148.67 Aligned_cols=185 Identities=18% Similarity=0.256 Sum_probs=111.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-eeE--EEeee--eeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QTI--LSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+.. |..+.+.+|++++|.|.+.+.+.+.+.|++.+. ..+ ..... .......|+.+... ...+.|.|.+++.+|
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D 81 (210)
T 1lk3_L 4 LTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGS-GTDFTLTIDPVEADD 81 (210)
T ss_dssp EEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCCGGG
T ss_pred EEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEec-CCEEEEEECCCCHHH
Confidence 444 778899999999999999888778899999532 111 11000 00111356665542 234589999999999
Q ss_pred CeEEEEEEecCCCc--ceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTVPMT--SQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~~~~~~ 171 (314)
+|.|.|.+.+.... .....|.|.. +|.+...... .....|+.+.|.|.+.|. |.+ .+.|++ ++..+.
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~--- 155 (210)
T 1lk3_L 82 TAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS--TEQLATGGASVVCLMNNFYPRDISVKWKI-DGTERR--- 155 (210)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC---
T ss_pred CeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc--hhhccCCcEEEEEEEEeEeCCceEEEEEe-CCccCC---
Confidence 99999999764321 1223555544 3444332211 112356667777776653 333 566666 333221
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeE-eeCCeeeEEEEEEeecCCCCC
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSR-LINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~L~i~~~~~~d~ 248 (314)
.. ....... .++.|...+.|.|.++..+|+
T Consensus 156 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 188 (210)
T 1lk3_L 156 -----------------------------------------------DGVLDSVTDQDSKDSTYSMSSTLSLTKADYESH 188 (210)
T ss_dssp -----------------------------------------------TTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred -----------------------------------------------CCceEccCCccCCCCCEEEEEEEEEChHHhccC
Confidence 11 0000000 112244556999999999999
Q ss_pred eEEEEEEeeCCCCce
Q psy15734 249 GSYRCVAVNALGETD 263 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~ 263 (314)
|.|+|.|.|......
T Consensus 189 G~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 189 NLYTCEVVHKTSSSP 203 (210)
T ss_dssp CEEEEEEECTTCSSC
T ss_pred CcEEEEEEecCCCCe
Confidence 999999999876543
No 130
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.87 E-value=2.5e-20 Score=150.15 Aligned_cols=204 Identities=18% Similarity=0.264 Sum_probs=120.3
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEEEe---------eeeeeecCcCEEEEeCC-ceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTILSI---------HHKVVTQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. +..+... .........|+.+..+. ...++|.|.+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRS 87 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECC
Confidence 34457799999999999998755 6799999853 2221111 00011234577776543 3456799999
Q ss_pred ecCCCCeEEEEEEecC-----CCcceeEEEEEEe----------------CCceeeecCcceeEEecCceEEEEEEeccc
Q psy15734 94 VQETDRGWYMCQINTV-----PMTSQKGYLQVVV----------------PPRILLDRTSTDVVVREGTEVTLECSAVGY 152 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~-----~~~~~~~~l~v~~----------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 152 (314)
++.+|+|.|+|.+.+. ........|.|.. ++.+... +....+.+|+.++|.|.+.+.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~~ 165 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQS--PSSLSASLGERVSITCRASQD 165 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEE--CSEEEECTTCCEEEEEEESSC
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcC--CCeEEEECCCCEEEEEEEecC
Confidence 9999999999999654 1123345667664 3333332 345667788888888888877
Q ss_pred CCCceEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCe
Q psy15734 153 PEPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGY 232 (314)
Q Consensus 153 p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~ 232 (314)
|.+.+.|++.... ....+ +.+ ...........++..... +
T Consensus 166 ~~~~v~W~k~~~~-------------------------~~~~~-----------~~~-~~~~~~~~~~~r~~~~~~--~- 205 (256)
T 3umt_A 166 IGSNLNWLQQKPD-------------------------GTIKR-----------LIY-ATSSLDSGVPKRFSGSRS--G- 205 (256)
T ss_dssp CTTCEEEEEECTT-------------------------CCEEE-----------EEE-TTTEECTTSCTTEEEEEE--T-
T ss_pred CCcEEEEEEECCC-------------------------CCcEE-----------EEE-eccccCCccCCCEEEecC--C-
Confidence 7778888873110 00000 000 000000001122222211 1
Q ss_pred eeEEEEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec
Q psy15734 233 SCHMTLKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLV 273 (314)
Q Consensus 233 ~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 273 (314)
...+|.|.+++.+|+|.|+|.|.|..+.. .....|.|...
T Consensus 206 -~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 206 -SDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp -TEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred -CEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 13489999999999999999999865432 23445555543
No 131
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.87 E-value=2.2e-21 Score=155.63 Aligned_cols=198 Identities=17% Similarity=0.172 Sum_probs=114.8
Q ss_pred cCCcceEEEcCCcEEEEEEecCCCce-----EEEEEEcCcee----EEEeee--ee--eecCcCEEEEeCCceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLREY-----KVAWVKMITQT----ILSIHH--KV--VTQNKRVSITFNDHRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~~~-----~v~W~~~~~~~----~~~~~~--~~--~~~~~~~~~~~~~~~~~~L~i~ 92 (314)
.++..+.+.+|++++|.|.+.+.+.+ .+.|++.+... ...... .. +....++.........++|.|.
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 87 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLP 87 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEES
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeC
Confidence 45667889999999999999765554 49999964321 111000 00 0001111101111223469999
Q ss_pred eecCCCCeEEEEEEecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEcCCCceeec
Q psy15734 93 DVQETDRGWYMCQINTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRREDGKAINY 169 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~~~~~~~~~ 169 (314)
+++.+|+|.|+|.+.+.. .....+.|.|..+|.+...+. .....|+.+.|.|.+.+ +|.| .+.|++ ++..+..
T Consensus 88 ~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~---~~~~~~~~~~L~C~~~g~~P~pi~v~W~k-~g~~l~~ 163 (248)
T 3pv7_A 88 GIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD---QVGMKENEDKYMCESSGFYPEAINITWEK-QTQKFPH 163 (248)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC-----------CEEEEEEEEEBSSCCEEEEEE-ECSSSCS
T ss_pred CCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecC---CccccCCCcEEEEEEccEECCCeEEEEEE-CCccCCC
Confidence 999999999999997653 345567788888888766542 23446777889999988 6888 899998 4433211
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEEEEeecCCCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L~i~~~~~~d~ 248 (314)
..... .+.. ....... ++.+...+.|.|.....+|.
T Consensus 164 ~~~~~--------------------------------------~~~~-----~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 200 (248)
T 3pv7_A 164 PIEIS--------------------------------------EDVI-----TGPTIKNMDGTFNVTSCLKLNSSQEDPG 200 (248)
T ss_dssp CEEEC--------------------------------------TTEE-----EEEEEECTTSCEEEEEEEECC--CCCTT
T ss_pred ccccc--------------------------------------ccee-----ecccEECCCCCEEEEEEEEEcCccccCC
Confidence 00000 0000 0000011 11234456899999999999
Q ss_pred eEEEEEEeeCCCCcee--EEEEEE
Q psy15734 249 GSYRCVAVNALGETDG--FIKVYV 270 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~--~~~l~V 270 (314)
|.|+|.|.|..+.... .+.|.|
T Consensus 201 g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 201 TVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CEEEEEEECTTCSSCEEEEECC--
T ss_pred CEEEEEEECCCCCCCcEEEEEEEE
Confidence 9999999999987544 555555
No 132
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.87 E-value=3.5e-20 Score=149.06 Aligned_cols=207 Identities=17% Similarity=0.252 Sum_probs=124.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEEEe---------eeeeeecCcCEEEEeCC-ceeEEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTILSI---------HHKVVTQNKRVSITFND-HRSWFLH 90 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~L~ 90 (314)
++.++..+.+.+|++++|.|.+.+.+ .+.+.|+|.. +..+... .........|+.+..+. ...++|.
T Consensus 4 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 4 LLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp CEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred eEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 44567788999999999999998743 6799999942 2221111 00111224577766543 3456799
Q ss_pred EeeecCCCCeEEEEEEecCCCc--ceeEEEEEEe---------------CCceeeecCcceeEEecCceEEEEEEecccC
Q psy15734 91 LRDVQETDRGWYMCQINTVPMT--SQKGYLQVVV---------------PPRILLDRTSTDVVVREGTEVTLECSAVGYP 153 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~---------------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 153 (314)
|.+++.+|+|.|+|.+.+.... .....|.|.. ++.+... +....+.+|++++|.|.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~~ 161 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT--PASLAVSLGQRATISCRASENV 161 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEE--CSEEEECTTSCEEEEEEESSCC
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECc--CCeEEEeCCCCEEEEEEecCcc
Confidence 9999999999999999764222 2345666664 2333322 3556788899999999888877
Q ss_pred CC----ceEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEee
Q psy15734 154 EP----YVAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLI 229 (314)
Q Consensus 154 ~p----~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~ 229 (314)
.+ .+.|++..... ... .+.+ ...........++.... .
T Consensus 162 ~~~~~~~v~W~r~~~~~-------------------------~~~-----------~~~~-~~~~~~~~~~~r~~~~~-~ 203 (253)
T 3uzq_A 162 DRYGNSFMHWYQQKAGQ-------------------------PPK-----------LLIY-RASNLESGIPARFSGSG-S 203 (253)
T ss_dssp EETTEECEEEEEECTTS-------------------------CCE-----------EEEE-TTTEECTTCCTTEEEEE-E
T ss_pred ccCCCcEEEEEEECCCC-------------------------CCE-----------EEEE-EccccCCccCCceEEeC-C
Confidence 65 88898731100 000 0000 00000000012222211 1
Q ss_pred CCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec
Q psy15734 230 NGYSCHMTLKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLV 273 (314)
Q Consensus 230 ~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 273 (314)
. ...+|.|.+++.+|+|.|+|.|.|..+.. ..-..|.|...
T Consensus 204 ~---~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 204 R---TDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp T---TEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred C---CEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 1 13489999999999999999999965443 23445555544
No 133
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.87 E-value=2.1e-20 Score=150.67 Aligned_cols=137 Identities=21% Similarity=0.345 Sum_probs=92.3
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e---eEEEe--eeeeeecCcCEEEEe-CCceeEEEEEeee
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q---TILSI--HHKVVTQNKRVSITF-NDHRSWFLHLRDV 94 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~---~~~~~--~~~~~~~~~~~~~~~-~~~~~~~L~i~~~ 94 (314)
..+..++..+.+.+|++++|.|.+.+.+.+.+.|+|... . .+... .........|+.+.. .....++|.|.++
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 83 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASV 83 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSC
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCC
Confidence 456677888999999999999999888889999998531 1 11111 011122345666642 3334568999999
Q ss_pred cCCCCeEEEEEEecCCC-----cceeEEEEEEe--------------------CCceeeecCcceeEEecCceEEEEEEe
Q psy15734 95 QETDRGWYMCQINTVPM-----TSQKGYLQVVV--------------------PPRILLDRTSTDVVVREGTEVTLECSA 149 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~--------------------~p~~~~~~~~~~~~~~~g~~~~l~C~~ 149 (314)
+.+|+|.|+|.+.+... ......|.|.. +|.+.. .+....+.+|+.++|.|.+
T Consensus 84 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~p~~~~v~~G~~v~L~C~~ 161 (256)
T 3tf7_C 84 HRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQ--SPRNKVTVTGENVTLSCRQ 161 (256)
T ss_dssp CGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEE--SCSEEEEETTCCEEECEEE
T ss_pred CcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEe--cCCEEEEeCCCcEEEEEEc
Confidence 99999999999976432 12234566654 222322 2455667788888888888
Q ss_pred cccCCCceEEEc
Q psy15734 150 VGYPEPYVAWRR 161 (314)
Q Consensus 150 ~~~p~p~~~W~~ 161 (314)
.+. .+.+.|++
T Consensus 162 ~~~-~~~v~W~k 172 (256)
T 3tf7_C 162 TNS-HNYMYWYR 172 (256)
T ss_dssp CSC-CSEEEEEE
T ss_pred CCC-ceEEEEEE
Confidence 765 66888887
No 134
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.87 E-value=4.5e-21 Score=151.16 Aligned_cols=187 Identities=17% Similarity=0.301 Sum_probs=109.0
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-cee---EEEeee------eee--ecCcCEEEEeCC-ceeEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQT---ILSIHH------KVV--TQNKRVSITFND-HRSWFLHL 91 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~---~~~~~~------~~~--~~~~~~~~~~~~-~~~~~L~i 91 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +.. +..... ... ...+|+.+..+. ...++|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (222)
T 1q9r_B 6 ESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQM 85 (222)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEE
T ss_pred cCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEE
Confidence 34567899999999999998754 6799999964 221 111100 000 123577776542 34568999
Q ss_pred eeecCCCCeEEEEEEecCCC------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEE
Q psy15734 92 RDVQETDRGWYMCQINTVPM------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAW 159 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W 159 (314)
.+++.+|+|.|.|.+.+... ......|.|.. +|.+.... ....+.+|+.+.|.|.+.|. |.| .+.|
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W 163 (222)
T 1q9r_B 86 NTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTW 163 (222)
T ss_dssp CSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEEC--CCSCCCCSSEEEEEEEEEEEBSSCCEEEE
T ss_pred CcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcc--ccccccCCCcEEEEEEEccEECCCCEEEE
Confidence 99999999999999976431 12234555543 22222221 01112345555555555543 444 5555
Q ss_pred EcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEE
Q psy15734 160 RREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~ 239 (314)
++ ++..+... ........+.|...+.|.
T Consensus 164 ~~--------------------------------------------------~g~~~~~~--~~~~~~~~~~~~~~s~L~ 191 (222)
T 1q9r_B 164 NS--------------------------------------------------GSLSSGVH--TFPAVLQSDLYTLSSSVT 191 (222)
T ss_dssp GG--------------------------------------------------GTBCTTEE--EEEEEEETTEEEEEEEEE
T ss_pred ec--------------------------------------------------CCeEcceE--eccccccCCcEEEEEEEE
Confidence 54 32111000 000111112244556899
Q ss_pred EeecCCCCCeEEEEEEeeCCCCceeEEEE
Q psy15734 240 IRSILSHQFGSYRCVAVNALGETDGFIKV 268 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 268 (314)
|.++..+| |.|+|.|.|..|.......|
T Consensus 192 i~~~~~~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 192 VPSSTWPS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp EETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred ECchhcCC-CeEEEEEEccCCCCcEEEec
Confidence 99999999 99999999999876555443
No 135
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.87 E-value=1.1e-20 Score=147.77 Aligned_cols=187 Identities=17% Similarity=0.251 Sum_probs=109.6
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC---ceEEEEEEcC-ceeEEEee----eeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR---EYKVAWVKMI-TQTILSIH----HKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~---~~~v~W~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
+.. +..+.+.+|++++|.|.+.+.+ .+.+.|++++ +..+.... ........|+.+... ...+.|.|.+++
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~ 81 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLI-GDKAALTITGAQ 81 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSCC
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEee-CCEEEEEECCCC
Confidence 444 7788999999999999998766 4789999964 22211100 000012346655542 233589999999
Q ss_pred CCCCeEEEEEEecCCCc--ceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEecccC-CC-ceEEEcCCCcee
Q psy15734 96 ETDRGWYMCQINTVPMT--SQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGYP-EP-YVAWRREDGKAI 167 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~--~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-~p-~~~W~~~~~~~~ 167 (314)
.+|+|.|.|.+.+.... .....|.|. .+|.+..... ...+..|+.+.|.|.+.+.+ ++ .+.|++ ++..+
T Consensus 82 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l 158 (212)
T 1q0x_L 82 TEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPP--SSEELSTAKATLVCTITDFYPGVVTVDWKV-DGTPV 158 (212)
T ss_dssp GGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECC--CHHHHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEE
T ss_pred ccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCC--CHHHccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeC
Confidence 99999999999764321 122345553 2333333221 11122455666666666542 22 566666 33222
Q ss_pred ecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eeeEeeC-CeeeEEEEEEeecCC
Q psy15734 168 NYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDSRLIN-GYSCHMTLKIRSILS 245 (314)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~~~~~-~~~~~s~L~i~~~~~ 245 (314)
...... ......+ .|...+.|.|.++..
T Consensus 159 --------------------------------------------------~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 188 (212)
T 1q0x_L 159 --------------------------------------------------TAGMETTQPSKQSNNKYMASSYLTLTARAW 188 (212)
T ss_dssp --------------------------------------------------CTTEEECCCEECTTSCEEEEEEEEEEHHHH
T ss_pred --------------------------------------------------CCCeecCCceeCCCCCEEEEEEEEEcHHHc
Confidence 111000 0111112 245566899999999
Q ss_pred CCCeEEEEEEeeCCCCceeE
Q psy15734 246 HQFGSYRCVAVNALGETDGF 265 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~~~~~ 265 (314)
+|+|.|+|.|.|......++
T Consensus 189 ~d~g~Y~C~a~n~~~~~~~~ 208 (212)
T 1q0x_L 189 ERHSSYSCQVTHEGHSSNKT 208 (212)
T ss_dssp TTCCEEEEEEEETTEEEEEE
T ss_pred cCCCcEEEEEEeCCcceeee
Confidence 99999999999987554433
No 136
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.87 E-value=1.7e-21 Score=169.58 Aligned_cols=216 Identities=15% Similarity=0.207 Sum_probs=130.8
Q ss_pred EEcCCcEEEEEEecCC-Cce-EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCC
Q psy15734 33 ATVGKEALMACVVENL-REY-KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVP 110 (314)
Q Consensus 33 v~~g~~~~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 110 (314)
+.+|+.+.|.|.+.+. |.+ .+.|++++.......... ....+.+... ..|.|.+++.+| |.|+|.+.+..
T Consensus 135 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~-~~~~~~~~~~------s~L~i~~~~~~d-g~Y~C~a~n~~ 206 (444)
T 1igt_B 135 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPA-VLQSDLYTLS------SSVTVTSSTWPS-QSITCNVAHPA 206 (444)
T ss_dssp CCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCC-EEETTEEEEE------EEEEECSTTTTT-SCCEEEEEETT
T ss_pred CCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEecCc-cccCCcEEEE------EEEEEchhhcCC-CeEEEEEEeCC
Confidence 4789999999999874 655 999998654310100000 0111222221 269999999999 99999998764
Q ss_pred Ccc-eeEEEEE------------------EeCCceeeecCcceeE-EecCceEEEEEEecccC----CCceEEEcCCCce
Q psy15734 111 MTS-QKGYLQV------------------VVPPRILLDRTSTDVV-VREGTEVTLECSAVGYP----EPYVAWRREDGKA 166 (314)
Q Consensus 111 ~~~-~~~~l~v------------------~~~p~~~~~~~~~~~~-~~~g~~~~l~C~~~~~p----~p~~~W~~~~~~~ 166 (314)
... ....+.+ ..+|.+...+ +.... +..|+.+.|.|.+.|.+ .+.+.|++ ++..
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~-p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k-~~~~ 284 (444)
T 1igt_B 207 SSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFP-PKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFV-NNVE 284 (444)
T ss_dssp TTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEEC-CCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEE
T ss_pred CCcceEEEeccCCCCcccCCccccCCcccCCCceEEecC-CchhheeecCCCcEEEEEEeecccCCCCeEEEEEE-CCcc
Confidence 332 2222221 1134443332 22222 47899999999999884 35899999 5544
Q ss_pred eecC----------C------eeC-------------------------------------CCeEEcCC-CcceeecCcc
Q psy15734 167 INYN----------G------ELV-------------------------------------PPMLTIPN-QLEGAFVSQT 192 (314)
Q Consensus 167 ~~~~----------~------~~~-------------------------------------~p~~~~~~-~~~~v~~g~~ 192 (314)
+... + .+. +|.+.+.+ ....+..| .
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~ 363 (444)
T 1igt_B 285 VHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-Q 363 (444)
T ss_dssp CSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-E
T ss_pred ccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-e
Confidence 3211 0 000 34443322 22233444 5
Q ss_pred EEEEEEEeec-CCc-eeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 193 VELHCHTEAF-PAS-LNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 193 ~~l~C~~~g~-p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
+.|.|.+.|. |++ .+.|++++.. +............++ |...+.|.|.....+|.|.|+|.|.|..-
T Consensus 364 ~~L~C~~~g~~P~~~~v~W~k~g~~-l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 364 VTLTCMVTDFMPEDIYVEWTNNGKT-ELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp EEEEEEEEEEBSSCCEEEEEETTEE-CSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred EEEEEEEEeeeCCCCEEEEEECCEE-ccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 9999999994 555 8999997543 321111111112333 66677899998888999999999999764
No 137
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.86 E-value=2.5e-20 Score=149.37 Aligned_cols=138 Identities=17% Similarity=0.355 Sum_probs=84.5
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-eeE--E-Eee------eeeeecCcCEEEEeC-CceeEEE
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QTI--L-SIH------HKVVTQNKRVSITFN-DHRSWFL 89 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~~--~-~~~------~~~~~~~~~~~~~~~-~~~~~~L 89 (314)
.+..+ ..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. ..+ . ... ........|+.+..+ ....++|
T Consensus 5 ~v~~p-~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 83 (247)
T 2ghw_B 5 QLVQS-GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYL 83 (247)
T ss_dssp EEEEE-CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEE
T ss_pred EEEec-CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEE
Confidence 34334 468899999999999998876 57899999532 111 1 100 000112357776654 2345689
Q ss_pred EEeeecCCCCeEEEEEEecCC-C--cceeEEEEEEeCCc-------------eeeecCcceeEEecCceEEEEEEecccC
Q psy15734 90 HLRDVQETDRGWYMCQINTVP-M--TSQKGYLQVVVPPR-------------ILLDRTSTDVVVREGTEVTLECSAVGYP 153 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~-~--~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p 153 (314)
.|.+++.+|+|.|+|.+.+.. . ......|.|..++. ......+....+.+|+.++|.|.+.+.|
T Consensus 84 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~ 163 (247)
T 2ghw_B 84 QMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSV 163 (247)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCC
T ss_pred EECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCc
Confidence 999999999999999997651 1 12234566654421 0011112344566677777777766666
Q ss_pred CCceEEEc
Q psy15734 154 EPYVAWRR 161 (314)
Q Consensus 154 ~p~~~W~~ 161 (314)
.+.+.|++
T Consensus 164 ~~~v~W~k 171 (247)
T 2ghw_B 164 RSNLAWYQ 171 (247)
T ss_dssp TTCEEEEE
T ss_pred cceEEEEE
Confidence 66677766
No 138
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.86 E-value=6.9e-22 Score=171.56 Aligned_cols=230 Identities=11% Similarity=0.141 Sum_probs=136.3
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCC-Cce-EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENL-REY-KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+|.+........+.+|+.+.|.|.+.+. |.+ .+.|++++........ ......+.+... ..|.|.+++.+|
T Consensus 119 ~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~-~~~~~~~~~~~~------s~L~i~~~~~~d 191 (434)
T 1igy_B 119 PPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTF-PAVLQSDLYTLS------SSVTVPSSPRPS 191 (434)
T ss_dssp CCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEEC-CCEECSSCEEEE------EEEEEETTTTTS
T ss_pred CCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEec-CceecCCcEEEE------EEEEEcchhcCC
Confidence 4544432222235789999999999875 655 9999986532101000 001111233322 269999999999
Q ss_pred CeEEEEEEecCCCc-ceeEEEEEEe----------C--CceeeecCccee-EEecCceEEEEEEecccC----CCceEEE
Q psy15734 99 RGWYMCQINTVPMT-SQKGYLQVVV----------P--PRILLDRTSTDV-VVREGTEVTLECSAVGYP----EPYVAWR 160 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~-~~~~~l~v~~----------~--p~~~~~~~~~~~-~~~~g~~~~l~C~~~~~p----~p~~~W~ 160 (314)
|.|+|.+.+.... .....+.+.. + |.+...+ +... .+.+|+.+.|.|.+.+.+ .+.+.|+
T Consensus 192 -g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~-p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~ 269 (434)
T 1igy_B 192 -ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFP-PKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWF 269 (434)
T ss_dssp -SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEEC-CCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBB
T ss_pred -CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeC-CChHHhcccCCCcEEEEEEeccccCCCCeEEEEE
Confidence 9999999875332 2223332210 0 3433332 1111 177899999999999883 3589999
Q ss_pred cCCCceeecC----------Ce------eC-------------------------------------CCeEEcCCCccee
Q psy15734 161 REDGKAINYN----------GE------LV-------------------------------------PPMLTIPNQLEGA 187 (314)
Q Consensus 161 ~~~~~~~~~~----------~~------~~-------------------------------------~p~~~~~~~~~~v 187 (314)
+ ++..+... +. +. +|.+.+.+.....
T Consensus 270 k-~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~ 348 (434)
T 1igy_B 270 V-DNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQ 348 (434)
T ss_dssp S-SSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSS
T ss_pred e-CCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHH
Confidence 9 44443210 10 00 2333222222223
Q ss_pred ecCccEEEEEEEeecCC--ceeEEecCCCeeeecCCceeeeEeeC-CeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 188 FVSQTVELHCHTEAFPA--SLNYWTNEKGDMIITGDDYEDSRLIN-GYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 188 ~~g~~~~l~C~~~g~p~--p~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
..|+.+.|.|.+.|.++ +.+.|++++..+ ............+ .|...+.|.|.....+|+|.|+|.|.|....
T Consensus 349 ~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l-~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 349 MAKDKVSLTCMITDFFPEDITVEWQSDGQAP-ENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp SSSSEEEEEEEEEEEBCSCEEEEEEETTSCC-SCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred hcCCcEEEEEEEEeeECCCeEEEEEECCEec-CCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 35778999999999644 389999975443 2111111111223 3666778999999889999999999998654
No 139
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=1.7e-20 Score=153.36 Aligned_cols=178 Identities=17% Similarity=0.214 Sum_probs=131.5
Q ss_pred eCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCee----------C-----------------
Q psy15734 122 VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGEL----------V----------------- 174 (314)
Q Consensus 122 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~----------~----------------- 174 (314)
.+|.+... +....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+...... .
T Consensus 4 ~pP~~~~~--p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 4 APPFFDLK--PVSVDLALGESGTFKCHVTGTAPIKITWAK-DNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCEEEEC--CCCEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEcc--ccceEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 46666554 356778999999999999999999999999 66554432210 0
Q ss_pred -----------------CCeEEc-CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEE
Q psy15734 175 -----------------PPMLTI-PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHM 236 (314)
Q Consensus 175 -----------------~p~~~~-~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s 236 (314)
+|.+.. ......+.+|+.+.|.|.+.|.|.+.+.|++++ ..+.....+....... ..
T Consensus 81 ~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~-~~~~~~~~~~~~~~~~----~~ 155 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDE-TEIQESSKFRMSFVES----VA 155 (284)
T ss_dssp EETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETT-EECCCSSSEEEEEETT----EE
T ss_pred EECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECC-EECcCCCcEEEEEcCC----EE
Confidence 454443 334556889999999999999999999999974 4444444444433222 34
Q ss_pred EEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeE--EEEccccccEeEEEEEeeccCCCccceE
Q psy15734 237 TLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQ--IRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 237 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~--~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.-... ...+..++...+.|.+.+.|.|.+.|..
T Consensus 156 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~ 228 (284)
T 2rik_A 156 VLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHK 228 (284)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEE
Confidence 8999999999999999999999999989999988876422111 1233455566799999999999999953
No 140
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.86 E-value=2.6e-21 Score=153.36 Aligned_cols=137 Identities=18% Similarity=0.309 Sum_probs=88.4
Q ss_pred ecCCcceEEEcCCcEEEEEEecCCCc-eEEEEEEcCce----eEEEeeeeeeecCcCEE----------EEeCCceeEEE
Q psy15734 25 AEPVANVTATVGKEALMACVVENLRE-YKVAWVKMITQ----TILSIHHKVVTQNKRVS----------ITFNDHRSWFL 89 (314)
Q Consensus 25 ~~~~~~~~v~~g~~~~l~C~~~~~~~-~~v~W~~~~~~----~~~~~~~~~~~~~~~~~----------~~~~~~~~~~L 89 (314)
+..+..+.+.+|+++.|.|.+.+.+. +.+.|++++.. .+............++. +..+ +.|
T Consensus 4 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~----~~L 79 (231)
T 2pet_A 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ----GRL 79 (231)
T ss_dssp CCCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT----CCE
T ss_pred ccCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC----ceE
Confidence 34567889999999999999998874 89999986543 22110000000011221 2221 259
Q ss_pred EEeeecCCCCeEEEEEEecC--CCcceeEEEEEEeCCceee-ecCcceeEEecCceE-EEEEEe-cccCCCceEEEcCCC
Q psy15734 90 HLRDVQETDRGWYMCQINTV--PMTSQKGYLQVVVPPRILL-DRTSTDVVVREGTEV-TLECSA-VGYPEPYVAWRREDG 164 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~l~v~~~p~~~~-~~~~~~~~~~~g~~~-~l~C~~-~~~p~p~~~W~~~~~ 164 (314)
.|.+++.+|+|.|+|.+.+. +.....+.|.|..+|.... ...+....+.+|+.+ .|.|.+ .+.|.|.+.|++ ++
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~ 158 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NG 158 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TT
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE-CC
Confidence 99999999999999999664 4445666788887764322 111233445567766 888887 677777888887 44
Q ss_pred ce
Q psy15734 165 KA 166 (314)
Q Consensus 165 ~~ 166 (314)
..
T Consensus 159 ~~ 160 (231)
T 2pet_A 159 QR 160 (231)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 141
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=7.6e-21 Score=153.03 Aligned_cols=189 Identities=16% Similarity=0.238 Sum_probs=114.8
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCC-----ceEEEEEEcC-ceeEE--Eeee--eeeecCcCEEEEeCCceeEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLR-----EYKVAWVKMI-TQTIL--SIHH--KVVTQNKRVSITFNDHRSWFL 89 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~v~W~~~~-~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~L 89 (314)
.+|.+...+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +..+. .... .......|+.+... ...++|
T Consensus 37 ~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L 115 (254)
T 2c1o_A 37 RELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGS-GTDFTL 115 (254)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEE
T ss_pred eceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecC-CCEEEE
Confidence 367777778899999999999999998876 3899999854 22111 1000 00111356666542 234489
Q ss_pred EEeeecCCCCeEEEEEEecCCCc--ceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcC
Q psy15734 90 HLRDVQETDRGWYMCQINTVPMT--SQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRRE 162 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~ 162 (314)
.|.+++.+|+|.|+|.+.+.... .....|.|.. +|.+..... ......|+.++|.|.+.+. |+ +.+.|++
T Consensus 116 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k- 192 (254)
T 2c1o_A 116 KISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKI- 192 (254)
T ss_dssp EESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCCEEEEEE-
T ss_pred EECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecC--ChhhccCCcEEEEEEEecccCCCcEEEEEE-
Confidence 99999999999999999764321 1223455543 344433221 1112245677777777663 33 2466776
Q ss_pred CCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeEee-CCeeeEEEEE
Q psy15734 163 DGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSRLI-NGYSCHMTLK 239 (314)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~~~-~~~~~~s~L~ 239 (314)
++..+. .. ......... +.|...+.|.
T Consensus 193 ~g~~l~--------------------------------------------------~~~~~~~~~~~~~~g~~~~~~~L~ 222 (254)
T 2c1o_A 193 DGSERQ--------------------------------------------------NGVLNSWTDQDSKDSTYSMSSTLT 222 (254)
T ss_dssp SSSEEC--------------------------------------------------TTEEEEECCCCTTTCCEEEEEEEE
T ss_pred CCCccc--------------------------------------------------CcceeccccccCCCCcEEEEEEEE
Confidence 433321 11 000000011 1234456999
Q ss_pred EeecCCCCCeEEEEEEeeCCCCc
Q psy15734 240 IRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
|.++..+|+|.|+|.|.|.....
T Consensus 223 i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 223 LTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEHHHHHTCCEEEEEEECTTCSS
T ss_pred eccccccCCCeEEEEEEcCCCCC
Confidence 99999999999999999987654
No 142
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.86 E-value=7.5e-20 Score=149.52 Aligned_cols=206 Identities=16% Similarity=0.224 Sum_probs=118.0
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-eeE---EEee------eeeeecCcCEEEEeC-CceeEEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QTI---LSIH------HKVVTQNKRVSITFN-DHRSWFLH 90 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~~L~ 90 (314)
++..|..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. ..+ .... ........|+.+..+ ....++|.
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 34556688999999999999998764 57999999642 111 1100 000112457776653 22346899
Q ss_pred EeeecCCCCeEEEEEEecCCC------cceeEEEEEEeCCc-------------eeeecCcceeEEecCceEEEEEEecc
Q psy15734 91 LRDVQETDRGWYMCQINTVPM------TSQKGYLQVVVPPR-------------ILLDRTSTDVVVREGTEVTLECSAVG 151 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~~------~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~ 151 (314)
|.+++.+|+|.|+|.+.+... ......|.|..+|. ......+....+.+|++++|.|.+.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 188 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASS 188 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecC
Confidence 999999999999999976532 11234677765431 11111133455667777777777776
Q ss_pred cCCCceEEEcCC-CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeC
Q psy15734 152 YPEPYVAWRRED-GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLIN 230 (314)
Q Consensus 152 ~p~p~~~W~~~~-~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~ 230 (314)
.| +.+.|++.. +..+ ..+.+.. .+.......++..... .
T Consensus 189 ~~-~~v~W~k~~~g~~~-------------------------------------~~~~~~~-~~~~~~~~~r~~~~~~-~ 228 (282)
T 1qok_A 189 SV-SYMHWFQQKPGTSP-------------------------------------KLWIYST-SNLASGVPARFSGSGS-G 228 (282)
T ss_dssp CC-SCCEEEEECTTSCC-------------------------------------EEEEETT-TEECTTCCTTEEEEEE-T
T ss_pred CC-ceEEEEEECCCCCc-------------------------------------EEEEEEe-cCCCCcccCCeEEecC-C
Confidence 66 677777621 1110 0000100 0000001223322211 1
Q ss_pred CeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEe
Q psy15734 231 GYSCHMTLKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNL 272 (314)
Q Consensus 231 ~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~ 272 (314)
...+|.|.+++.+|+|.|+|.|.|..+.. .....|.|..
T Consensus 229 ---~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 229 ---TSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp ---TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred ---CEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 13489999999999999999999854322 2334555543
No 143
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.86 E-value=3e-20 Score=151.44 Aligned_cols=140 Identities=18% Similarity=0.269 Sum_probs=88.1
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCce----eEEEeeee-eeecCcCEEEEeCCceeEEEEEeee
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQ----TILSIHHK-VVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
..+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+.. .+...... ......|+.+... ...++|.|.++
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v 89 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGS-GTDFTLTISSL 89 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESSC
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEecc-CCeEEEEEccC
Confidence 456677788899999999999999998888889999996431 11111000 0112456666542 23458999999
Q ss_pred cCCCCeEEEEEEecCCC--cceeEEEEEEeCCc-------------eeeecCcceeEEecCceEEEEEEecccC--CCce
Q psy15734 95 QETDRGWYMCQINTVPM--TSQKGYLQVVVPPR-------------ILLDRTSTDVVVREGTEVTLECSAVGYP--EPYV 157 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~ 157 (314)
+.+|+|.|.|.+.+... ......|.|..+|. +.... +....+.+|+.++|.|.+.+.+ .+.+
T Consensus 90 ~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~-p~~~~v~~G~~v~L~C~~~g~~~~~~~v 168 (276)
T 3auv_A 90 QPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVE-SGGGLVQPGGSLRLSCAASGFTISDYWI 168 (276)
T ss_dssp CGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEE-ECCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred ChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEEC-CCceEecCCCeEEEEEEecCccCCCCEE
Confidence 99999999999976422 22334566655432 11111 2345566777777777776654 3667
Q ss_pred EEEc
Q psy15734 158 AWRR 161 (314)
Q Consensus 158 ~W~~ 161 (314)
.|++
T Consensus 169 ~W~k 172 (276)
T 3auv_A 169 HWVR 172 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
No 144
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.86 E-value=1.8e-20 Score=144.37 Aligned_cols=130 Identities=19% Similarity=0.242 Sum_probs=75.8
Q ss_pred cCCcceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeee------eee----cCcCEEEEeCCceeEEEEEeee
Q psy15734 26 EPVANVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHK------VVT----QNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
..+..+.+.+|++++|.|.+.+ .+.+.+.|++++ ..+...... ... ..+|+.+.. +++|.|.++
T Consensus 3 ~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~----~~sL~I~~v 77 (193)
T 2if7_A 3 LTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNE-TSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ----SYSLQLSNL 77 (193)
T ss_dssp CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEETT-EEEEEEECCSSSCCEEEECCHHHHTTEEECT----TCCEEECSC
T ss_pred CCCeEEEEEecCeEEEeccCCCcccccEEEEEECC-EEEEEEecccCCCCceeecCccccccEEECC----CeEEEECCC
Confidence 3567889999999999999975 445799999954 333211100 000 113555542 347999999
Q ss_pred cCCCCeEEEEEEecCCC-cceeEEEEEEeCCceeeecCcceeEEecCc-eEEEEEEeccc-CCCceEEEc
Q psy15734 95 QETDRGWYMCQINTVPM-TSQKGYLQVVVPPRILLDRTSTDVVVREGT-EVTLECSAVGY-PEPYVAWRR 161 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~-~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~~~-p~p~~~W~~ 161 (314)
+.+|+|.|.|.+.+... ....+.|.|..++......... .....|. .+.|.|.+.+. |.|.+.|++
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~-~~~~~g~~~v~L~C~~~g~~p~p~i~W~~ 146 (193)
T 2if7_A 78 KMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHS-QLFQNMTCELHLTCSVEDADDNVSFRWEA 146 (193)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECC-C---CSSEEEEEEEEEESCCTTCEEEEEE
T ss_pred CcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCc-eeecCCCceEEEEEEEecCCCceEEEEEe
Confidence 99999999999976532 3445667776654322111000 1112233 45555555553 344555555
No 145
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.86 E-value=3.7e-20 Score=148.62 Aligned_cols=138 Identities=16% Similarity=0.296 Sum_probs=87.6
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e---eEEEe-eeeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q---TILSI-HHKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
.+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+. . .+... .........|+...... ..++|.|.+++
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~ 82 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG-TDYSLTISNLE 82 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET-TEEEEEESSCC
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC-CEEEEEEccCC
Confidence 3556677888999999999999999988888999999542 1 11110 00111123566554432 34589999999
Q ss_pred CCCCeEEEEEEecCCC--cceeEEEEEEeCC-------------------ceeeecCcceeEEecCceEEEEEEecccC-
Q psy15734 96 ETDRGWYMCQINTVPM--TSQKGYLQVVVPP-------------------RILLDRTSTDVVVREGTEVTLECSAVGYP- 153 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p-------------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p- 153 (314)
.+|+|.|.|.+.+... ......|.|..++ ..... +....+.+|+.++|.|.+.+.+
T Consensus 83 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~ 160 (250)
T 3esu_F 83 QEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQ--SGPELVKPGASVKISCKDSGYAF 160 (250)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEE--CCCEEECTTCCEEEEEECCSTTG
T ss_pred hhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEec--CCceEEcCCceEEEEEEecCCcc
Confidence 9999999999976422 2233456665431 11111 2345566777777777776654
Q ss_pred -CCceEEEc
Q psy15734 154 -EPYVAWRR 161 (314)
Q Consensus 154 -~p~~~W~~ 161 (314)
.+.+.|++
T Consensus 161 ~~~~v~W~k 169 (250)
T 3esu_F 161 SSSWMNWVK 169 (250)
T ss_dssp GGSEEEEEE
T ss_pred cCCEEEEEE
Confidence 56777776
No 146
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.86 E-value=1.4e-20 Score=147.31 Aligned_cols=182 Identities=14% Similarity=0.161 Sum_probs=110.5
Q ss_pred cCCcceEEEcCCcEEEEEEecCC-------CceEEEEEEcCce----eEEEeee----eeeecCcCEEEEeCC-ceeEEE
Q psy15734 26 EPVANVTATVGKEALMACVVENL-------REYKVAWVKMITQ----TILSIHH----KVVTQNKRVSITFND-HRSWFL 89 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~-------~~~~v~W~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~-~~~~~L 89 (314)
..+..+.+.+|++++|.|.+.+. +.+.+.|+|.+.. .+..... ......+|+.+..+. ...++|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 44678899999999999999753 5689999996532 1111100 001123566665431 234579
Q ss_pred EEeeecCCCCeEEEEEEecCCCc-----ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc----CCCceEEE
Q psy15734 90 HLRDVQETDRGWYMCQINTVPMT-----SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY----PEPYVAWR 160 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~p~~~W~ 160 (314)
.|.+++.+|+|.|.|.+.+.... ...+.|.|..++.......+. .+.+|+.++|.|.+.+. |.|.+.|+
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE--PLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C--CCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc--cccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 99999999999999999765311 235667777643211111111 14567777777777653 56667777
Q ss_pred cCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEE
Q psy15734 161 REDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i 240 (314)
+ ++ .... . ... ... +.|.|
T Consensus 163 ~-~~-------------------------------------------------~~~~-~-~~~----~~~-----~~L~i 181 (214)
T 2zg1_A 163 G-NA-------------------------------------------------LSPL-D-PET----TRS-----SELTL 181 (214)
T ss_dssp S-ST-------------------------------------------------TSSS-C-SSC----CCS-----SEEEE
T ss_pred C-CC-------------------------------------------------CccC-C-CCc----eeE-----EEEEE
Confidence 6 22 1110 0 000 111 28999
Q ss_pred eecCCCCCeEEEEEEeeCCCCc--eeEEEEEE
Q psy15734 241 RSILSHQFGSYRCVAVNALGET--DGFIKVYV 270 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V 270 (314)
..+..+|+|.|+|.|.|..+.. ++.+.|.|
T Consensus 182 ~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 182 TPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp CCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred ecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 9999999999999999986544 45555443
No 147
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.86 E-value=1e-20 Score=152.09 Aligned_cols=189 Identities=17% Similarity=0.262 Sum_probs=114.1
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCC-----ceEEEEEEcCc-eeE--EEee--eeeeecCcCEEEEeCCceeEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLR-----EYKVAWVKMIT-QTI--LSIH--HKVVTQNKRVSITFNDHRSWFL 89 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~v~W~~~~~-~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~L 89 (314)
..+.+..++..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. ..+ .... ........|+.+... ...++|
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L 111 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGS-GTDFTL 111 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEcc-CCEEEE
Confidence 345666778889999999999999998876 58999999642 111 1100 000111356666542 234589
Q ss_pred EEeeecCCCCeEEEEEEecCCCc--ceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcC
Q psy15734 90 HLRDVQETDRGWYMCQINTVPMT--SQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRRE 162 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~ 162 (314)
.|.+++.+|+|.|.|.+.+.... .....|.|.. +|.+..... ...+.+|+.++|.|.+.+. |.+ .+.|++
T Consensus 112 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k- 188 (252)
T 3bkj_L 112 RISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKI- 188 (252)
T ss_dssp EESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECC--CHHHHHHTEEEEEEEEEEEBSSCCEEEEEE-
T ss_pred EECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCC--ChhhcCCCcEEEEEEEeeEeCCCcEEEEEE-
Confidence 99999999999999999654221 1223455543 344433221 1112356677777777663 333 567776
Q ss_pred CCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeE-eeCCeeeEEEEE
Q psy15734 163 DGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSR-LINGYSCHMTLK 239 (314)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~L~ 239 (314)
++..+. .. ....... .++.|...+.|.
T Consensus 189 ~g~~~~--------------------------------------------------~~~~~~~~~~~~~~g~~~~~s~L~ 218 (252)
T 3bkj_L 189 DGSERQ--------------------------------------------------NGVLNSWTDQDSKDSTYSMSSTLT 218 (252)
T ss_dssp TTEEEC--------------------------------------------------SSEEEEECCCCTTTCCEEEEEEEE
T ss_pred CCeecC--------------------------------------------------CCeeeecCcccCCCCCEEEEEEEE
Confidence 333221 10 0000000 112244556899
Q ss_pred EeecCCCCCeEEEEEEeeCCCCc
Q psy15734 240 IRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
|.++..+|+|.|+|.|.|.....
T Consensus 219 i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 219 LTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp EEHHHHHHCCEEEEEEECTTCSS
T ss_pred EcchhccCCCeEEEEEEeCCCCC
Confidence 99999999999999999987654
No 148
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.86 E-value=4.7e-20 Score=147.28 Aligned_cols=138 Identities=17% Similarity=0.251 Sum_probs=86.1
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e---eEEEeee-eeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q---TILSIHH-KVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
+.+...+..+.+.+|++++|.|.+.+.+.+.+.|+|... . .+..... .......|+.+... ...++|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~ 80 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGS-GTDFTLSINSVET 80 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEEEESSCCG
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecC-CCEEEEEECCCCh
Confidence 345667888999999999999999888888999999642 1 1111000 00012457766542 2345899999999
Q ss_pred CCCeEEEEEEecCCCc--ceeEEEEEEeCCc------------eeeecCcceeEEecCceEEEEEEecccC--CCceEEE
Q psy15734 97 TDRGWYMCQINTVPMT--SQKGYLQVVVPPR------------ILLDRTSTDVVVREGTEVTLECSAVGYP--EPYVAWR 160 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~------------~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~W~ 160 (314)
+|+|.|.|.+.+.... .....|.|..+|. +.... +....+.+|++++|.|.+.+.| .+.+.|+
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 159 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQE-SGPSLVKPSQTLSLTCSVTGDSITSDYXSXI 159 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEE-ECCSEECTTSCEEEEEEEESSCGGGSCEEEE
T ss_pred HHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeec-CCcceecCCCeEEEEEEEEccccCCcceeeE
Confidence 9999999999765321 2334677766542 11111 1223466777777777776654 3567777
Q ss_pred c
Q psy15734 161 R 161 (314)
Q Consensus 161 ~ 161 (314)
+
T Consensus 160 k 160 (242)
T 2znx_A 160 R 160 (242)
T ss_dssp E
T ss_pred e
Confidence 6
No 149
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.86 E-value=6.3e-20 Score=147.89 Aligned_cols=139 Identities=19% Similarity=0.288 Sum_probs=90.7
Q ss_pred ceecCCcceEEEcCCcEEEEEEecC--CCceEEEEEEcCc-eeE--E-Eeee-----eeeecCcCEEEEeCC-ceeEEEE
Q psy15734 23 RFAEPVANVTATVGKEALMACVVEN--LREYKVAWVKMIT-QTI--L-SIHH-----KVVTQNKRVSITFND-HRSWFLH 90 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~-~~~--~-~~~~-----~~~~~~~~~~~~~~~-~~~~~L~ 90 (314)
..+..+..+.+.+|++++|.|.+.+ .+.+.+.|+|... ... . .... .......|+.+..+. ...++|.
T Consensus 10 v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 89 (257)
T 3gkz_A 10 VQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQ 89 (257)
T ss_dssp EEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEE
Confidence 3445566778999999999999977 3578999999532 111 1 1000 001123577766542 3456899
Q ss_pred EeeecCCCCeEEEEEEecCC-----CcceeEEEEEEeC------------CceeeecCcceeEEecCceEEEEEEecccC
Q psy15734 91 LRDVQETDRGWYMCQINTVP-----MTSQKGYLQVVVP------------PRILLDRTSTDVVVREGTEVTLECSAVGYP 153 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~~~------------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 153 (314)
|.+++.+|+|.|+|.+.+.. .......|.|..+ +.......+....+.+|++++|.|.+.+.+
T Consensus 90 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 169 (257)
T 3gkz_A 90 LKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSV 169 (257)
T ss_dssp ECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCC
T ss_pred ECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCc
Confidence 99999999999999997641 1123345677654 112222234556788889999999888877
Q ss_pred CC-ceEEEc
Q psy15734 154 EP-YVAWRR 161 (314)
Q Consensus 154 ~p-~~~W~~ 161 (314)
.+ .+.|++
T Consensus 170 ~~~~v~W~k 178 (257)
T 3gkz_A 170 SSSHLYWYQ 178 (257)
T ss_dssp CGGGEEEEE
T ss_pred cceEEEEEE
Confidence 76 888987
No 150
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.86 E-value=1.2e-20 Score=149.17 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=109.2
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEE---Eee----eeee--ecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTIL---SIH----HKVV--TQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~---~~~----~~~~--~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +..+. ... .... ...+|+.+..+. ...++|.|.
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 345678899999999999998765 6799999964 22211 110 0000 124677776542 345689999
Q ss_pred eecCCCCeEEEEEEecCCC--cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCC
Q psy15734 93 DVQETDRGWYMCQINTVPM--TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDG 164 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~ 164 (314)
+++.+|+|.|.|.+.+... ......|.|.. +|.+.... + ...+..|+.++|.|.+.+. |.+ .+.|++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~--- 159 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA-P-VCGDTSGSSVTLGCLVKGYFPEPVTLTWNS--- 159 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC-C-CC------CEEEEEEEEEEBSSCCEEEEGG---
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec-C-CccccCCCcEEEEEEeecEeCCCeEEEEec---
Confidence 9999999999999975421 11223455543 22222211 0 1123345555555555543 433 455544
Q ss_pred ceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeee-ecCCceeeeEeeCCeeeEEEEEEeec
Q psy15734 165 KAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMI-ITGDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
++..+. ..... .. ..+.|...+.|.|.++
T Consensus 160 -----------------------------------------------~g~~~~~~~~~~--~~-~~g~~~~~s~L~i~~~ 189 (227)
T 1mju_H 160 -----------------------------------------------GSLSSGVHTFPA--VL-QSDLYTLSSSVTVTSS 189 (227)
T ss_dssp -----------------------------------------------GTBCTTEEECCC--EE-ETTEEEEEEEEEECTT
T ss_pred -----------------------------------------------CCCcCCcEECCc--ee-cCCeEEEEEEEEEchh
Confidence 322110 00110 00 1123445669999999
Q ss_pred CCCCCeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 244 LSHQFGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
..+| |.|+|.|.|..+.......+.+..+
T Consensus 190 ~~~~-g~Y~C~a~n~~~~~~~~~~~~~~~~ 218 (227)
T 1mju_H 190 TWPS-QSITCNVAHPASSTKVDKKIEPRGP 218 (227)
T ss_dssp TTTT-SCCEEEEEEGGGTEEEEEECCCCCC
T ss_pred hcCC-CeEEEEEEECCCCcceEEEeCCCCC
Confidence 9888 9999999998766555555554444
No 151
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.86 E-value=2e-20 Score=146.81 Aligned_cols=184 Identities=15% Similarity=0.194 Sum_probs=108.8
Q ss_pred CcceEEEcCCcEEEEEEe-cCCC-ceEEEEEEcCc-eeEE--Eee--eeeeecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 28 VANVTATVGKEALMACVV-ENLR-EYKVAWVKMIT-QTIL--SIH--HKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~-~~~~-~~~v~W~~~~~-~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
|..+.+.+|++++|.|.+ .+.+ .+.+.|+|.+. ..+. ... ........|+.+... ...++|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G 85 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKS-GTSATLGITGLQTGDEA 85 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEE-TTEEEEEECSCCGGGCE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEecc-CCEEEEEECCCCcccCE
Confidence 567899999999999995 4432 57999999642 1111 100 000111346665542 23458999999999999
Q ss_pred EEEEEEecCCC---cceeEEEEEE---eCCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCceeecCCe
Q psy15734 101 WYMCQINTVPM---TSQKGYLQVV---VPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKAINYNGE 172 (314)
Q Consensus 101 ~Y~C~~~~~~~---~~~~~~l~v~---~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~~~~~~~ 172 (314)
.|.|.+.+... ......|.|. .+|.+...... .....|+.+.|.|.+.+. |.+ .+.|++ ++..+.
T Consensus 86 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~---- 158 (216)
T 2xzc_L 86 DYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS--DEQLKSGTASVVCLLNNFYPREAKVQWKV-DNALQS---- 158 (216)
T ss_dssp EEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC----
T ss_pred EEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC--hhhccCCcEEEEEEEEeEcCCceEEEEEE-CCeecC----
Confidence 99999976543 1223355554 23444332211 112246677777777663 443 667776 333221
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeE-eeCCeeeEEEEEEeecCCCCCe
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSR-LINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G 249 (314)
.. ....... .++.|...+.|.|.++..+|+|
T Consensus 159 ----------------------------------------------~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 192 (216)
T 2xzc_L 159 ----------------------------------------------GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHK 192 (216)
T ss_dssp ----------------------------------------------SSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCC
T ss_pred ----------------------------------------------CCeeEecCcccCCCCCEEEEEEEEECHHHhCCCC
Confidence 11 0000000 1122455669999999999999
Q ss_pred EEEEEEeeCCCCceeE
Q psy15734 250 SYRCVAVNALGETDGF 265 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~~~ 265 (314)
.|+|.|.|........
T Consensus 193 ~Y~C~a~n~~~~~~~~ 208 (216)
T 2xzc_L 193 VYACEVTHQGLSSPVT 208 (216)
T ss_dssp EEEEEEECTTCSSCEE
T ss_pred cEEEEEEcCCCCCceE
Confidence 9999999987654433
No 152
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.85 E-value=1.5e-20 Score=150.54 Aligned_cols=190 Identities=14% Similarity=0.263 Sum_probs=114.1
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc----eeEEEee--e-eeee---cCcCEEEEeCCceeEEEEE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT----QTILSIH--H-KVVT---QNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~----~~~~~~~--~-~~~~---~~~~~~~~~~~~~~~~L~i 91 (314)
+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|... ..+.... . .... ...|+.+..+....++|.|
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 346667888999999999999999888889999998421 1111111 0 0011 1256766654344568999
Q ss_pred eeecCCCCeEEEEEEecCCC-----cceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecccCCC--ceE
Q psy15734 92 RDVQETDRGWYMCQINTVPM-----TSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGYPEP--YVA 158 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~-----~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p--~~~ 158 (314)
.+++.+|+|.|+|.+.+... ......|.|.. +|.+.... +....+..|+.+.|.|.+.+.|++ .+.
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~ 160 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELS 160 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeec-CCchhccCCCcEEEEEEEccCcCCceEEE
Confidence 99999999999999965321 11233455553 33332221 122223345666666666554332 556
Q ss_pred EEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-------eeCC
Q psy15734 159 WRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-------LING 231 (314)
Q Consensus 159 W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-------~~~~ 231 (314)
|++ ++..+. ......... .++.
T Consensus 161 W~k-~g~~l~--------------------------------------------------~~~~~~~~~~~~~~~~~~g~ 189 (246)
T 4dzb_B 161 WWV-NGKEVH--------------------------------------------------SGVCTDPQPLKEQPALNDSR 189 (246)
T ss_dssp EEE-TTEEEC--------------------------------------------------TTEEECSSCEESSTTSTTCC
T ss_pred EEE-CCEECC--------------------------------------------------CCcccccccccccccCCCCC
Confidence 665 333321 111000000 1222
Q ss_pred eeeEEEEEEeecCCCC-CeEEEEEEeeCCCCce
Q psy15734 232 YSCHMTLKIRSILSHQ-FGSYRCVAVNALGETD 263 (314)
Q Consensus 232 ~~~~s~L~i~~~~~~d-~G~Y~C~a~n~~g~~~ 263 (314)
|...+.|.|.....+| .|.|+|.|.|......
T Consensus 190 ~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 190 YALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 222 (246)
T ss_dssp EEEEEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EEEEEEEEECHHHhccCCCeEEEEEEecCCCCc
Confidence 5555689999999888 9999999999876554
No 153
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.85 E-value=5.6e-20 Score=142.60 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=83.4
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
...+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++...... .. ..+ .......+.|.|.+++.+
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~-~~-----~~~---~~~~~~~~~l~I~~v~~~ 73 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTL-RL-----IGE---HHDGVSKANFSISRMTQD 73 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEE-EE-----ECE---EETTEEEEEEEESSCCGG
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcc-ee-----eee---cCCCCceEEEEeccCCcc
Confidence 345677776665 77899999999999975 66799999965432111 00 000 011122347999999999
Q ss_pred CCeEEEEEEecCC------CcceeEEEEEEeC---CceeeecCcceeEEecCceEEEEEEecccCCCceEEEc
Q psy15734 98 DRGWYMCQINTVP------MTSQKGYLQVVVP---PRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRR 161 (314)
Q Consensus 98 d~G~Y~C~~~~~~------~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~ 161 (314)
|+|.|+|.+.+.. ..+..+.|.|... |.+...+ . ..+.+|+.++|.|.+.+ +.+.+.|++
T Consensus 74 D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p--~-~~v~~G~~v~L~C~~~~-~~~~~~w~k 142 (201)
T 1nkr_A 74 LAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQP--G-PTVLAGENVTLSCSSRS-SYDMYHLSR 142 (201)
T ss_dssp GCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEES--C-SEECTTCEEEEEEEESS-CCSEEEEEE
T ss_pred cCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCC--C-CccCCCCeEEEEEeCCC-CCceEEEEE
Confidence 9999999996431 2234556777653 4444332 1 35677888888887765 456677777
No 154
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.85 E-value=1.4e-20 Score=147.10 Aligned_cols=184 Identities=17% Similarity=0.230 Sum_probs=106.3
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeE---EEeee-----eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTI---LSIHH-----KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~---~~~~~-----~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +..+ ..... ......+|+.+..+. ...++|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 85 (210)
T 3d9a_H 6 ESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSV 85 (210)
T ss_dssp EESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCC
Confidence 35567899999999999998764 4799999863 2211 11000 000124577766532 23458999999
Q ss_pred cCCCCeEEEEEEecCCCcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCceee
Q psy15734 95 QETDRGWYMCQINTVPMTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKAIN 168 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~~~ 168 (314)
+.+|+|.|.|.+.+.........|.|.. +|.+.... ....+..|+.+.|.|.+.+. |.| .+.|++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~------- 156 (210)
T 3d9a_H 86 TTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS------- 156 (210)
T ss_dssp CGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEEC--CTTSCCCSSEEEEEEEEEEEBSSCCEEEEGG-------
T ss_pred CcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEec--CCcccccCCcEEEEEEEeeEecCCcEEEEee-------
Confidence 9999999999996542122234555542 22222221 01113345555555555544 444 555554
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
++......... ... ..+.|...+.|.|.++..+|
T Consensus 157 -------------------------------------------~~~~~~~~~~~-~~~-~~~~~~~~s~L~i~~~~~~~- 190 (210)
T 3d9a_H 157 -------------------------------------------GSLSSGVHTFP-AVL-QSDLYTLSSSVTVPSSTWPS- 190 (210)
T ss_dssp -------------------------------------------GTBCTTEEECC-CEE-ETTEEEEEEEEEEEGGGTTT-
T ss_pred -------------------------------------------CCcccceEEcC-Ccc-CCCcEEEEEEEEEcHHHcCC-
Confidence 32211000000 000 11224445689999998877
Q ss_pred eEEEEEEeeCCCCceeE
Q psy15734 249 GSYRCVAVNALGETDGF 265 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~ 265 (314)
|.|+|.|.|..|.....
T Consensus 191 g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 191 ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp SCCEEEEEEGGGTEEEE
T ss_pred CcEEEEEEeCCCCcccc
Confidence 99999999998876544
No 155
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.85 E-value=6.9e-20 Score=144.45 Aligned_cols=187 Identities=14% Similarity=0.253 Sum_probs=108.6
Q ss_pred CcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-ee---EEEeee------eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 28 VANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QT---ILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~---~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|... .. +..... ......+|+.+..+. ...++|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3578899999999999998754 47899999642 21 111100 001124577776542 34568999999
Q ss_pred cCCCCeEEEEEEecCCC-------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEc
Q psy15734 95 QETDRGWYMCQINTVPM-------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRR 161 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~ 161 (314)
+.+|+|.|.|.+.+... ......|.|.. +|.+.... + ...+.+|+.+.|.|.+.+. |.| .+.|++
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~-~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 164 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLV-S-CENSNPSSTVAVGCLAQDFLPDSITFSWKY 164 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEE-C-TTCCCSSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEec-C-CcccCCCCcEEEEEEEEEEeCCCeEEEeEc
Confidence 99999999999976431 11223455542 22222211 0 1112345555555555544 444 555555
Q ss_pred CCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEe
Q psy15734 162 EDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
.++.. +.....+......+.|...+.|.|.
T Consensus 165 ~~g~~--------------------------------------------------l~~~~~~~~~~~~~~~~~~s~L~i~ 194 (223)
T 1dee_B 165 KNNSD--------------------------------------------------ISSTRGFPSVLRGGKYAATSQVLLP 194 (223)
T ss_dssp TTSCB--------------------------------------------------CSCEEECCCEEETTEEEEEEEEEEE
T ss_pred cCCCc--------------------------------------------------cceeEECCccccCCeEEEEEEEEEc
Confidence 22221 1110000000112235556789998
Q ss_pred ecCC--CCCeEEEEEEeeCCCCceeEE
Q psy15734 242 SILS--HQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 242 ~~~~--~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
.... +|.|.|+|.|.|..+.....+
T Consensus 195 ~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 195 SKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp CTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred HHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 8876 889999999999998766554
No 156
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.85 E-value=1.7e-20 Score=147.64 Aligned_cols=185 Identities=16% Similarity=0.227 Sum_probs=107.3
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-cee---EEEeee--------eeeecCcCEEEEeCC-ceeEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQT---ILSIHH--------KVVTQNKRVSITFND-HRSWFLHL 91 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~---~~~~~~--------~~~~~~~~~~~~~~~-~~~~~L~i 91 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +.. +..... ......+|+.+..+. ...++|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 35678899999999999998755 6899999964 221 111100 000113577766532 23458999
Q ss_pred eeecCCCCeEEEEEEecCCCc--c--eeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCC
Q psy15734 92 RDVQETDRGWYMCQINTVPMT--S--QKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRRED 163 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~~--~--~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~ 163 (314)
.+++.+|+|.|.|.+.+.... . ....|.|.. +|.+.... ....+.+
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~------------------------ 139 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLV--PGCSDTS------------------------ 139 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC--CCSCCSC------------------------
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcc--cccccCC------------------------
Confidence 999999999999999765311 1 234455542 22222211 0111233
Q ss_pred CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeec-CCc-eeEEecCCCeee-ecCCceeeeEeeCCeeeEEEEEE
Q psy15734 164 GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAF-PAS-LNYWTNEKGDMI-ITGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p-~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~s~L~i 240 (314)
|+.+.|.|.+.|. |.| .+.|++++.... ...... ...+.|...+.|.|
T Consensus 140 --------------------------g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~---~~~~~~~~~s~L~i 190 (220)
T 1pz5_B 140 --------------------------GSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSV---LQSGFYSLSSLVTV 190 (220)
T ss_dssp --------------------------SSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCE---EETTEEEEEEEEEE
T ss_pred --------------------------CCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCc---ccCCeEEEEEEEEE
Confidence 4445555555443 444 455554332100 000000 01122444569999
Q ss_pred eecCCCCCeEEEEEEeeCCCCceeEEE
Q psy15734 241 RSILSHQFGSYRCVAVNALGETDGFIK 267 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 267 (314)
.++..+| |.|+|.|.|..|..++.+.
T Consensus 191 ~~~~~~~-g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 191 PSSTWPS-QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp CGGGTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cchhcCC-ceEEEEEEECCccEeeeec
Confidence 9988866 9999999999997666554
No 157
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.85 E-value=4.7e-20 Score=148.87 Aligned_cols=140 Identities=16% Similarity=0.214 Sum_probs=79.3
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC---cee-EEEee--e--eeee---cCcCEEEEeCCceeEEEE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI---TQT-ILSIH--H--KVVT---QNKRVSITFNDHRSWFLH 90 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~---~~~-~~~~~--~--~~~~---~~~~~~~~~~~~~~~~L~ 90 (314)
|.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.. ... +.... . .... .+.+..........++|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 56667788899999999999999988788899999942 111 11111 0 0000 012222222233445899
Q ss_pred EeeecCCCCeEEEEEEecCCC----cceeEEEEEEeCC---------------ceeeecCcceeEEecCceEEEEEEecc
Q psy15734 91 LRDVQETDRGWYMCQINTVPM----TSQKGYLQVVVPP---------------RILLDRTSTDVVVREGTEVTLECSAVG 151 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~~p---------------~~~~~~~~~~~~~~~g~~~~l~C~~~~ 151 (314)
|.+++.+|+|.|+|.+.+... ......|.|..++ .......+....+.+|++++|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 999999999999999976432 2233567776532 111122245567788888888887766
Q ss_pred c-CCCceEEEc
Q psy15734 152 Y-PEPYVAWRR 161 (314)
Q Consensus 152 ~-p~p~~~W~~ 161 (314)
. +.+.+.|++
T Consensus 163 ~~~~~~v~W~k 173 (259)
T 3omz_A 163 SWWSYYIFWYK 173 (259)
T ss_dssp CCSSCEEEEEE
T ss_pred ccCCceEEEee
Confidence 4 677888887
No 158
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=8e-20 Score=145.58 Aligned_cols=182 Identities=13% Similarity=0.078 Sum_probs=116.8
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
...+|.|...+.. .+.+|++++|.|.+.+ +...+.|+|++ ..+... ... . ........|.|.+++.+
T Consensus 4 ~~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g-~~~~~~-----~~~-~----~~~~~~~~L~I~~v~~~ 70 (242)
T 1p6f_A 4 TLPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEG-SLFAVD-----RPK-P----PERINKVKFYIPDMNSR 70 (242)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETT-EEEEEE-----CCS-S----CTTCCEEEEEECSCCGG
T ss_pred CCCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECC-Cccccc-----ccc-c----cCCcceeEEEecCCCcc
Confidence 3467888777766 8999999999999975 45689999954 332210 000 0 01112347999999999
Q ss_pred CCeEEEEEEecCC---CcceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCC
Q psy15734 98 DRGWYMCQINTVP---MTSQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNG 171 (314)
Q Consensus 98 d~G~Y~C~~~~~~---~~~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~ 171 (314)
|+|.|+|.+.+.. ..+..+.|.|.. +|.+...+ ...+.+|++++|.|.+.+. .+.+.|++ ++..
T Consensus 71 DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p---~~~v~~G~~vtL~C~~~~~-~~~~~w~k-~g~~----- 140 (242)
T 1p6f_A 71 MAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP---GPEVISGEKVTFYCRLDTA-TSMFLLLK-EGRS----- 140 (242)
T ss_dssp GCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEES---CSEEETTCEEEEEEECTTS-CSEEEEEE-CSSS-----
T ss_pred cCeEEEEEEecCCccccCCcceEEEeecccCCCceEccC---CCccCCCCcEEEEEecCCC-CCEEEEEE-CCCc-----
Confidence 9999999996531 234456677764 34444332 2356778888888877643 34677777 3221
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
... ... .... ...|.|.+++.+|+|.|
T Consensus 141 --------------------------------------------~~~---~~~-~~~~-----~~~l~I~~v~~~d~G~Y 167 (242)
T 1p6f_A 141 --------------------------------------------SHV---QRG-YGKV-----QAEFPLGPVTTAHRGTY 167 (242)
T ss_dssp --------------------------------------------CEE---EEE-ECSS-----EEEEEEEECCGGGCEEE
T ss_pred --------------------------------------------cCc---ccc-CCCc-----eEEEEeCCCccccCEEE
Confidence 111 000 0001 23999999999999999
Q ss_pred EEEEeeCC---CCceeEEEEEEEecCC
Q psy15734 252 RCVAVNAL---GETDGFIKVYVNLVDG 275 (314)
Q Consensus 252 ~C~a~n~~---g~~~~~~~l~V~~~~~ 275 (314)
+|.|.|.. ...+..+.|.|.....
T Consensus 168 ~C~a~n~~~~~s~~S~~~~l~V~~~~~ 194 (242)
T 1p6f_A 168 RCFGSYNNHAWSFPSEPVKLLVTGDIE 194 (242)
T ss_dssp EEEEEEETTEECCCCCCEEEEEEC---
T ss_pred EEEEECCCCcccCCCCCEEEEEeccCC
Confidence 99999864 3456678888887543
No 159
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.85 E-value=9.1e-20 Score=146.97 Aligned_cols=135 Identities=19% Similarity=0.312 Sum_probs=84.1
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ce---eEEEeee-----eeeecCcCEEEEeC-CceeEEEEEeee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQ---TILSIHH-----KVVTQNKRVSITFN-DHRSWFLHLRDV 94 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~---~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~L~i~~~ 94 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +. .+..... .......|+.+..+ ....++|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (257)
T 1f3r_B 6 ESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSL 85 (257)
T ss_dssp EECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESC
T ss_pred CCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCC
Confidence 34456899999999999998764 6899999963 11 1111000 00112457777654 234568999999
Q ss_pred cCCCCeEEEEEEecCCC-------c---ceeEEEEEEeCCc-------------eeeecCcceeEEecCceEEEEEEecc
Q psy15734 95 QETDRGWYMCQINTVPM-------T---SQKGYLQVVVPPR-------------ILLDRTSTDVVVREGTEVTLECSAVG 151 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~-------~---~~~~~l~v~~~p~-------------~~~~~~~~~~~~~~g~~~~l~C~~~~ 151 (314)
+.+|+|.|+|.+.+... . .....|.|..++. ......+....+.+|+.++|.|.+.+
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 165 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQ 165 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSS
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECC
Confidence 99999999999976521 1 1234566665431 11111123445667777777777766
Q ss_pred cCCCceEEEc
Q psy15734 152 YPEPYVAWRR 161 (314)
Q Consensus 152 ~p~p~~~W~~ 161 (314)
.|.+.+.|++
T Consensus 166 ~~~~~v~W~k 175 (257)
T 1f3r_B 166 NINNYLAWYQ 175 (257)
T ss_dssp CCBTCEEEEE
T ss_pred cCCCcEEEEE
Confidence 6666777776
No 160
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.1e-20 Score=154.48 Aligned_cols=178 Identities=24% Similarity=0.370 Sum_probs=124.0
Q ss_pred eCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecC--------------------------CeeC-
Q psy15734 122 VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYN--------------------------GELV- 174 (314)
Q Consensus 122 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~--------------------------~~~~- 174 (314)
.+|.+... +.+..+.+|+.+.|.|.+.|.|.|.+.|++ ++..+... +.+.
T Consensus 5 ~~P~~~~~--p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 5 EPPRFIKE--PKDQIGVSGGVASFVCQATGDPKPRVTWNK-KGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCEEEEC--CCCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred cCCeeeec--CCceEecCCCeEEEEEEEEEeCCCeEEEEE-CCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 45666554 366788999999999999999999999998 44332111 0000
Q ss_pred -------------------C-------CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe
Q psy15734 175 -------------------P-------PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL 228 (314)
Q Consensus 175 -------------------~-------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~ 228 (314)
+ |.+...+....+..|+++.|.|.+.|.|.|.+.|++++...............
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~ 161 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL 161 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC
T ss_pred EEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC
Confidence 1 66777777778899999999999999999999999975443332222333334
Q ss_pred eCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeE-EEEEEEecCC-CeeEEE----EccccccEeEEEEEeeccCCC
Q psy15734 229 INGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGF-IKVYVNLVDG-DIFQIR----KMSRLHMGAYLCIASNGVVPS 302 (314)
Q Consensus 229 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~-~~~~~~----~~~~~~~g~~~C~a~~~~~~~ 302 (314)
.++ .|.|.++..+|+|.|+|.|.|..|..... ..|.|..... +.+... .+..++...+.|.+.+.|.|.
T Consensus 162 ~~~-----~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~ 236 (304)
T 2yd9_A 162 RSG-----ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY 236 (304)
T ss_dssp TTS-----CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCE
T ss_pred CCe-----EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCE
Confidence 444 89999999999999999999999876533 5555543221 222221 234445567999999999999
Q ss_pred ccceE
Q psy15734 303 VSHRI 307 (314)
Q Consensus 303 ~~w~v 307 (314)
+.|..
T Consensus 237 v~W~~ 241 (304)
T 2yd9_A 237 VKWMQ 241 (304)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
No 161
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.85 E-value=8.1e-20 Score=143.76 Aligned_cols=186 Identities=16% Similarity=0.244 Sum_probs=107.1
Q ss_pred CcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-ee---EEEeee------eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 28 VANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QT---ILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~---~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
+..+.+.+|++++|.|.+.+.+ .+.+.|+|... .. +..... ......+|+.+..+. ...++|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4568899999999999998754 57899999642 21 111100 001124678777642 34568999999
Q ss_pred cCCCCeEEEEEEecCCCc----ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecC
Q psy15734 95 QETDRGWYMCQINTVPMT----SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYN 170 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~----~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~ 170 (314)
+.+|+|.|.|.+.+.... .....|.|...+. ..|.+.-..
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~---------------------------~~P~v~~~~--------- 130 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESA---------------------------RNPTIYPLT--------- 130 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC---------------------------BCCEEEEEC---------
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCC---------------------------CCCEEEEee---------
Confidence 999999999999764321 1223444442110 011111110
Q ss_pred CeeCCCeEEcCCCcceeecCccEEEEEEEeec-CC--ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCC
Q psy15734 171 GELVPPMLTIPNQLEGAFVSQTVELHCHTEAF-PA--SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 171 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~--p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 247 (314)
...+..|+.+.|.|.+.+. |. +.+.|++++..+...... .....++.|...+.|.|.+...+|
T Consensus 131 -------------~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~d 196 (220)
T 2fbj_H 131 -------------LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFP-PALASGGRYTMSNQLTLPAVECPE 196 (220)
T ss_dssp -------------CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECC-CEECSSSCEEEEEEEEECGGGSCT
T ss_pred -------------cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecC-ceECCCCCEEEEEEEEECHHHcCC
Confidence 0012344555555555544 43 455555543322110000 001112235556789999999999
Q ss_pred CeEEEEEEeeCCCCce
Q psy15734 248 FGSYRCVAVNALGETD 263 (314)
Q Consensus 248 ~G~Y~C~a~n~~g~~~ 263 (314)
.|.|+|.|.|..+...
T Consensus 197 ~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 197 GESVKCSVQHDSNPVQ 212 (220)
T ss_dssp TCEEEEEEEETTSCCE
T ss_pred CCeEEEEEEcCCCceE
Confidence 9999999999988654
No 162
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.85 E-value=2.3e-19 Score=145.18 Aligned_cols=140 Identities=19% Similarity=0.308 Sum_probs=89.5
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCC------ceEEEEEEcC-cee---EEEeeee-eeecCcCEEEEeCCceeEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLR------EYKVAWVKMI-TQT---ILSIHHK-VVTQNKRVSITFNDHRSWF 88 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~------~~~v~W~~~~-~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (314)
..+.+..++..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +.. +...... ......|+.+... ...++
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~-~~~~~ 82 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGS-GTDFT 82 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEE
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecC-CCEEE
Confidence 456777788899999999999999998876 6899999963 221 1111000 0012457766542 23458
Q ss_pred EEEeeecCCCCeEEEEEEecCCC--cceeEEEEEEeCCc------------------eeeecCcceeEEecCceEEEEEE
Q psy15734 89 LHLRDVQETDRGWYMCQINTVPM--TSQKGYLQVVVPPR------------------ILLDRTSTDVVVREGTEVTLECS 148 (314)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p~------------------~~~~~~~~~~~~~~g~~~~l~C~ 148 (314)
|.|.+++.+|+|.|.|.+.+... ......|.|..+|. +.... +....+.+|++++|.|.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~ 161 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQ-SGPEVVKTGASVKISCK 161 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEE-CCCEEECTTCCEEEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeC-CCCEEEcCCCcEEEEEE
Confidence 99999999999999999976432 12335677776531 21111 12235667777777777
Q ss_pred ecccCC--CceEEEc
Q psy15734 149 AVGYPE--PYVAWRR 161 (314)
Q Consensus 149 ~~~~p~--p~~~W~~ 161 (314)
+.+.+. +.+.|++
T Consensus 162 ~~~~~~~~~~v~W~r 176 (264)
T 2gjj_A 162 ASGYSFTGYFINWVK 176 (264)
T ss_dssp EESSCGGGSEEEEEE
T ss_pred EeCCccCCeEEEEEE
Confidence 766543 5677776
No 163
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.85 E-value=9.7e-20 Score=145.23 Aligned_cols=138 Identities=21% Similarity=0.325 Sum_probs=94.2
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCC----ceEEEEEEcCc-ee--EEEeeee--eeecCcCEEEEeCCceeEEEEEee
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLR----EYKVAWVKMIT-QT--ILSIHHK--VVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~----~~~v~W~~~~~-~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
.+..++..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. .. ....... ......|+.+... ...++|.|.+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~ 81 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGS-RTDFTLIIDP 81 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEE-TTEEEEEESS
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEec-CCeEEEEEcC
Confidence 456677889999999999999998877 78999999631 11 1111000 0112456766543 2345899999
Q ss_pred ecCCCCeEEEEEEecCCC--cceeEEEEEEeCC-----ceeeecCcceeEEecCceEEEEEEecccC--CCceEEEcC
Q psy15734 94 VQETDRGWYMCQINTVPM--TSQKGYLQVVVPP-----RILLDRTSTDVVVREGTEVTLECSAVGYP--EPYVAWRRE 162 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p-----~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~~~W~~~ 162 (314)
++.+|+|.|+|.+.+... ......|.|..++ .+.... +....+.+|+.++|.|.+.+.| .+.+.|++.
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQ-SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeC-CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 999999999999976522 3344567776643 222221 3456788899999999988876 358999983
No 164
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.85 E-value=6.6e-20 Score=146.43 Aligned_cols=197 Identities=15% Similarity=0.208 Sum_probs=112.4
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-e---eEEEeee---eeee---cCcCEEEEeCC-ceeEE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENL--REYKVAWVKMIT-Q---TILSIHH---KVVT---QNKRVSITFND-HRSWF 88 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~---~~~~~~~---~~~~---~~~~~~~~~~~-~~~~~ 88 (314)
+.+..++..+.+.+|++++|.|.+.+. +...+.|+|... . .+..... .... ..+|+.+..+. ...++
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 81 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTST 81 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEE
Confidence 345667788999999999999999774 567999999642 2 1211110 0011 35677776533 24568
Q ss_pred EEEeeecCCCCeEEEEEEecCC--C------cceeEEEEEEeC-------CceeeecCcceeEEecCceEEEEEEeccc-
Q psy15734 89 LHLRDVQETDRGWYMCQINTVP--M------TSQKGYLQVVVP-------PRILLDRTSTDVVVREGTEVTLECSAVGY- 152 (314)
Q Consensus 89 L~i~~~~~~d~G~Y~C~~~~~~--~------~~~~~~l~v~~~-------p~~~~~~~~~~~~~~~g~~~~l~C~~~~~- 152 (314)
|.|.+++.+|+|.|.|.+.+.. . ......|.|... |...... +....+..|+.+.|.|.+.+.
T Consensus 82 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 82 LTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp EEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGGGGGSSSCEEEEEEEEEES
T ss_pred EEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChhhcccCCCceEEEEEeeEE
Confidence 9999999999999999996532 1 012235555542 1111111 111112234445555554443
Q ss_pred CCCceEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCe
Q psy15734 153 PEPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGY 232 (314)
Q Consensus 153 p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~ 232 (314)
|. .+.+.|+++++..+...........++.|
T Consensus 161 P~-------------------------------------------------~~~v~W~~~~~~~l~~~~~~~~~~~~~~~ 191 (242)
T 1hxm_B 161 PD-------------------------------------------------VIKIHWEEKKSNTILGSQEGNTMKTNDTY 191 (242)
T ss_dssp SC-------------------------------------------------CEEEEEEESSSCCCCCCEECCCEECSSSE
T ss_pred CC-------------------------------------------------CeEEEEEcCCCEeecCccccceecCCCcE
Confidence 32 13444444432111111000111122235
Q ss_pred eeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 233 SCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 233 ~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
...+.|.|.++.. | |.|+|.|.|..+.......+.+
T Consensus 192 ~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 192 MKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred EEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 5567899988775 5 9999999999987766655544
No 165
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.84 E-value=7.2e-20 Score=144.06 Aligned_cols=189 Identities=16% Similarity=0.261 Sum_probs=111.0
Q ss_pred CcceEEEcCCcEEEEEEecCCCce---EEEEEEcCceeEEEeeeee-------eecCcCEEEEeC------CceeEEEEE
Q psy15734 28 VANVTATVGKEALMACVVENLREY---KVAWVKMITQTILSIHHKV-------VTQNKRVSITFN------DHRSWFLHL 91 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~~~---~v~W~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------~~~~~~L~i 91 (314)
+..+.+..|++++|.|.+.+.+.+ .|.|+|+++..+....... .....+...... ....++|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 446889999999999999875543 5899997655432211100 011122222211 123457999
Q ss_pred eeecCCCCeEEEEEEecCCCc--ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEcCCCceee
Q psy15734 92 RDVQETDRGWYMCQINTVPMT--SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAIN 168 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~ 168 (314)
.+++.+|+|.|+|.+.+.... .....+.+..+|...... .......++...+.|.+. +.|++.+.|++.+
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~----- 160 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEA--QEVTIGPQSVAVARCVSTGGRPPARITWISSL----- 160 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEE--CCBCCSSSCEEEEEEEEEEEBSCCEEEEECSS-----
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecc--cceeecceeeeeeeeeecCCCCCCEEEEEECC-----
Confidence 999999999999999654322 222344555555444332 222344555555555543 4566677777632
Q ss_pred cCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 169 YNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 169 ~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
+..... .. ......+.+...+.|.|.++..+|+
T Consensus 161 ---------------------------------------------~~~~~~-~~-~~~~~~~~~~~~s~L~i~~~~~~d~ 193 (225)
T 4fmk_A 161 ---------------------------------------------GGEAKD-TQ-EPGIQAGTVTIISRYSLVPVGRADG 193 (225)
T ss_dssp ---------------------------------------------CCEEEE-EE-EECSSTTCEEEEEEEEECCCGGGTT
T ss_pred ---------------------------------------------ccccCC-cc-eEEecCCCEEEEEEEEEeeCCHHHC
Confidence 111110 00 0001112234456899999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEE
Q psy15734 249 GSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
|.|+|.|.|..+.......+.+
T Consensus 194 g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 194 VKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp CEEEEEEECTTCSSCEEEEEEC
T ss_pred CEEEEEEEcCCCCeEEEEEEEE
Confidence 9999999999887755444433
No 166
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.84 E-value=5.2e-19 Score=155.22 Aligned_cols=218 Identities=16% Similarity=0.229 Sum_probs=131.9
Q ss_pred EcCCcEEEEEEecCC-Cc--eEEEEEEcCceeEEEeeeeee-ecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecC
Q psy15734 34 TVGKEALMACVVENL-RE--YKVAWVKMITQTILSIHHKVV-TQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTV 109 (314)
Q Consensus 34 ~~g~~~~l~C~~~~~-~~--~~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 109 (314)
.+|+.+.|.|.+.+. |. ..+.|++++............ ..++.+.+. ..|.|.+++..|+|.|+|.+.+.
T Consensus 139 ~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~------s~L~i~~~~~~d~g~Y~C~a~n~ 212 (475)
T 1iga_A 139 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTS------SQLTLPATQCLAGKSVTCHVKHY 212 (475)
T ss_pred CCCCeEEEEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEE------EEEEechhHcCCCceEEEEEEEC
Confidence 689999999999886 54 399999854211000000000 122233322 26899999999999999999876
Q ss_pred CCcceeEEEE--EE------------------eCCceeeecCcceeEEecCceEEEEEEecccCC---CceEEEcCCCce
Q psy15734 110 PMTSQKGYLQ--VV------------------VPPRILLDRTSTDVVVREGTEVTLECSAVGYPE---PYVAWRREDGKA 166 (314)
Q Consensus 110 ~~~~~~~~l~--v~------------------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~---p~~~W~~~~~~~ 166 (314)
........+. |. .+|.+...+ +....+.+|+.+.|.|.+.|.++ +.+.| . ++..
T Consensus 213 ~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~-p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~ 289 (475)
T 1iga_A 213 TNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHR-PALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSG 289 (475)
T ss_pred CCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcC-CChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCc
Confidence 4333233333 21 133332222 22233578999999999998744 58999 4 2221
Q ss_pred ee---------cCCe------eC------------------------------------CCeEEc-CCCcceeecCccEE
Q psy15734 167 IN---------YNGE------LV------------------------------------PPMLTI-PNQLEGAFVSQTVE 194 (314)
Q Consensus 167 ~~---------~~~~------~~------------------------------------~p~~~~-~~~~~~v~~g~~~~ 194 (314)
.. .++. +. +|.+.+ ++....+..|+++.
T Consensus 290 ~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~ 369 (475)
T 1iga_A 290 KSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVT 369 (475)
T ss_pred CCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceE
Confidence 10 0110 00 333332 22223467899999
Q ss_pred EEEEEeecCC--ceeEEecCCCeeeecCCceee--eEe---eC-CeeeEEEEEEeecCCCCCeEEEEEEeeCCCC
Q psy15734 195 LHCHTEAFPA--SLNYWTNEKGDMIITGDDYED--SRL---IN-GYSCHMTLKIRSILSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 195 l~C~~~g~p~--p~~~W~~~~~~~~~~~~~~~~--~~~---~~-~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~ 261 (314)
|.|.+.|.++ +.+.|+++ +..+........ ... .+ .|...+.|.|.....+|.|.|+|.|.|....
T Consensus 370 L~C~~~g~~P~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 370 LTCLARGFSPKDVLVRWLQG-SQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEeeeECCCCEEEEEEC-CEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 9999999644 48999997 443332221111 111 22 3666788999999999999999999998754
No 167
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.84 E-value=2.8e-19 Score=143.20 Aligned_cols=137 Identities=17% Similarity=0.248 Sum_probs=87.3
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCC-----ceEEEEEEcCc-eeE--EEeeeeee--ecCcCEEEEeCCceeEEEEEe
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLR-----EYKVAWVKMIT-QTI--LSIHHKVV--TQNKRVSITFNDHRSWFLHLR 92 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~v~W~~~~~-~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~ 92 (314)
.+..++..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. ..+ ........ ....|+.+... ...++|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~ 81 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGS-GTDFTLKIS 81 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEE-TTEEEEEES
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccC-CCEEEEEEC
Confidence 455667889999999999999998876 68999999542 111 11100000 12456666542 234589999
Q ss_pred eecCCCCeEEEEEEecCCC--cceeEEEEEEeCC------------ceeeecCcceeEEecCceEEEEEEecccC--CCc
Q psy15734 93 DVQETDRGWYMCQINTVPM--TSQKGYLQVVVPP------------RILLDRTSTDVVVREGTEVTLECSAVGYP--EPY 156 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p--~p~ 156 (314)
+++.+|+|.|.|.+.+... ......|.|..++ .+.... +....+.+|+.++|.|.+.+.+ .+.
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~ 160 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQ-SGPELKKPGETVKISCKATNYAFTDYS 160 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSC
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeC-CCceeecCCCcEEEEEEEcCcccCCcE
Confidence 9999999999999976432 1233567776543 111111 1233477788888888877663 457
Q ss_pred eEEEc
Q psy15734 157 VAWRR 161 (314)
Q Consensus 157 ~~W~~ 161 (314)
+.|++
T Consensus 161 v~W~k 165 (247)
T 1svz_A 161 MHWVK 165 (247)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88887
No 168
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.84 E-value=3.7e-21 Score=150.54 Aligned_cols=184 Identities=17% Similarity=0.234 Sum_probs=108.7
Q ss_pred CcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeEEEee--e--eeeecCcCEEEEeCCceeEEEEEeeecCCCCeEE
Q psy15734 28 VANVTATVGKEALMACVVENLREYKVAWVKMI-TQTILSIH--H--KVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWY 102 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 102 (314)
+..+.+.+|++++|.|.+.+.+.+.+.|++.. +..+.... . .......|+.+... ...+.|.|.+++.+|+|.|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~v~~~D~G~Y 84 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTS-GTTATLTISGAQPEDEAAY 84 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEE-TTEEEEEETTCCGGGCSEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEee-CCEEEEEECcCCcccCEEE
Confidence 77889999999999999987766789999854 22221100 0 00011356665542 2344899999999999999
Q ss_pred EEEEecC-CCc---ceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCceeecCCe
Q psy15734 103 MCQINTV-PMT---SQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKAINYNGE 172 (314)
Q Consensus 103 ~C~~~~~-~~~---~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~~~~~~~ 172 (314)
+|.+.+. ... .....|.|. .+|.+.... ....+.+|+.+.|.|.+.+. |+ +.+.|++ ++..+
T Consensus 85 ~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~--~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~----- 156 (212)
T 1nfd_E 85 YCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFP--PSPEELRTNKATLVCLVNDFYPGSATVTWKA-NGATI----- 156 (212)
T ss_dssp EEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCC--CCHHHHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEE-----
T ss_pred EEEEEcccCcccccCCceEEEEccCCCCCCEEEeeC--CchHhccCCceEEEEEEEeeECCccEEEEEE-CCeEc-----
Confidence 9999752 111 122345553 233333221 11122356666666666654 33 4666666 33322
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCc-eeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDD-YEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
..... .......++|...+.|.|.++..+|+|.|
T Consensus 157 ---------------------------------------------~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 191 (212)
T 1nfd_E 157 ---------------------------------------------NDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRV 191 (212)
T ss_dssp ---------------------------------------------CSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCE
T ss_pred ---------------------------------------------CCCeecCCceecCCCceEEEEEEEchhhcCCCCeE
Confidence 11110 00011111244456899999999999999
Q ss_pred EEEEeeCCCCceeE
Q psy15734 252 RCVAVNALGETDGF 265 (314)
Q Consensus 252 ~C~a~n~~g~~~~~ 265 (314)
+|.|.|..+....+
T Consensus 192 ~C~a~n~~~~~~~~ 205 (212)
T 1nfd_E 192 SCQVTHEGETVEKS 205 (212)
T ss_dssp EEEEECTTTTCCCC
T ss_pred EEEEEeCCceEEEE
Confidence 99999998765443
No 169
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.84 E-value=7.3e-20 Score=146.42 Aligned_cols=189 Identities=17% Similarity=0.310 Sum_probs=114.5
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-cee---EEEee-eee-eec---CcCEEEEeCCceeEEEEEe
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQT---ILSIH-HKV-VTQ---NKRVSITFNDHRSWFLHLR 92 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~---~~~~~-~~~-~~~---~~~~~~~~~~~~~~~L~i~ 92 (314)
+.+..++..+.+.+|++++|.| ..+.+.+.+.|+|.. +.. +.... ... ... +.|+.+.......++|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 5667778889999999999999 556677899999832 111 11110 000 111 1677777655556789999
Q ss_pred eecCCCCeEEEEEEecCC-----CcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEE
Q psy15734 93 DVQETDRGWYMCQINTVP-----MTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAW 159 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W 159 (314)
+++.+|+|.|.|.+.+.. .......|.|.. +|.+.... +....+..|+.+.|.|.+.+. |.+ .+.|
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W 160 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSW 160 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeC-CCcccccCCCceEEEEEEeeEeCCCeEEEE
Confidence 999999999999997421 122334556652 33333221 122223446666677766653 333 5666
Q ss_pred EcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-------eeCCe
Q psy15734 160 RREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-------LINGY 232 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-------~~~~~ 232 (314)
++ ++..+. ......... .++.|
T Consensus 161 ~~-~g~~l~--------------------------------------------------~~~~~~~~~~~~~~~~~~g~~ 189 (245)
T 4ei6_B 161 WV-NGKEVH--------------------------------------------------SGVCTDPQPLKEQPALNDSRY 189 (245)
T ss_dssp EE-TTEEEC--------------------------------------------------TTEEECSSCEESSTTSTTCCE
T ss_pred EE-CCEECC--------------------------------------------------CCcccccccccccccCCCCCE
Confidence 66 443321 110000000 12224
Q ss_pred eeEEEEEEeecCCCC-CeEEEEEEeeCCCCce
Q psy15734 233 SCHMTLKIRSILSHQ-FGSYRCVAVNALGETD 263 (314)
Q Consensus 233 ~~~s~L~i~~~~~~d-~G~Y~C~a~n~~g~~~ 263 (314)
...+.|.|.....+| .|.|+|.|.|......
T Consensus 190 ~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~~~ 221 (245)
T 4ei6_B 190 ALSSRLRVSATFWQNPRNHFRCQVQFYGLSEN 221 (245)
T ss_dssp EEEEEEEEEHHHHSCTTCEEEEEEEECCBCTT
T ss_pred EEEEEEEEcHHHhccCCCeEEEEEEECCCCCc
Confidence 555689999999888 9999999999765444
No 170
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=7.4e-20 Score=146.92 Aligned_cols=185 Identities=13% Similarity=0.084 Sum_probs=111.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+. ..+.+|++++|.|.+.+ +...+.|+|++........ . .+ .........|.|.+++.+|
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~---~---~~---~~~~~~~~~L~I~~v~~~D 73 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHL---I---GE---HHDGVSKANFSIGPMMQDL 73 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEE---E---CB---CCTTCEEEEEEECSCCTTT
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCccee---e---ee---ccCCCceEEEEeecCCccc
Confidence 45677777675 67999999999999975 4678999996643211100 0 00 0111223479999999999
Q ss_pred CeEEEEEEecC------CCcceeEEEEEEeC---CceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec
Q psy15734 99 RGWYMCQINTV------PMTSQKGYLQVVVP---PRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY 169 (314)
Q Consensus 99 ~G~Y~C~~~~~------~~~~~~~~l~v~~~---p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~ 169 (314)
+|.|+|.+.+. ...+..+.|.|... |.+...+ ...+.+|++++|.|.+.+. .+.+.|++ ++..
T Consensus 74 sG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p---~~~V~~G~~vtL~C~~~~~-~~~~~w~k-~g~~--- 145 (257)
T 1b6u_A 74 AGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQP---GPTVLAGESVTLSCSSRSS-YDMYHLSR-EGEA--- 145 (257)
T ss_dssp CEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSS---CTTCBTTCEEEEEEECSSC-CSEEEEEE-TTSS---
T ss_pred CEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccC---CCccCCCCEEEEEEeCCCC-CcEEEEEE-CCcc---
Confidence 99999998642 12244556666642 3333222 1235677777777776654 34666666 3221
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
.......... ..+. ....|.|.+++ |+|
T Consensus 146 ----------------------------------------------~~~~~~~~~~--~~~~--~~~~l~I~~v~--D~G 173 (257)
T 1b6u_A 146 ----------------------------------------------HERRFSAGPK--VNGT--FQADFPLGPAT--HGG 173 (257)
T ss_dssp ----------------------------------------------CEECCBCBCC--SSSC--CBEEEEEEECC--SCE
T ss_pred ----------------------------------------------cCcccccccc--cCCc--eeEEEEecccc--cCE
Confidence 1111000000 0000 01389999998 999
Q ss_pred EEEEEEeeCCC-----CceeEEEEEEEecC
Q psy15734 250 SYRCVAVNALG-----ETDGFIKVYVNLVD 274 (314)
Q Consensus 250 ~Y~C~a~n~~g-----~~~~~~~l~V~~~~ 274 (314)
.|+|.|.|... ..+..+.|.|...|
T Consensus 174 ~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p 203 (257)
T 1b6u_A 174 TYRCFGSFRDSPYEWSNSSDPLLVSVTGNP 203 (257)
T ss_dssp EEEEEEECSSCTTBBCCCCCCEEECCBCCC
T ss_pred EEEEEEEcCCCCcccccCCCCEEEEEeccC
Confidence 99999997532 33456777777654
No 171
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.84 E-value=3.3e-20 Score=148.49 Aligned_cols=189 Identities=17% Similarity=0.341 Sum_probs=112.5
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-ee---EEEeeee---eeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QT---ILSIHHK---VVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
+..++..+.+.+|++++|.|.+.+.+.+.+.|+|... .. +...... .....+|+.+..+....++|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 4556778999999999999999988889999999431 11 1111000 011135666665434456899999999
Q ss_pred CCCeEEEEEEecCC-------CcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEc
Q psy15734 97 TDRGWYMCQINTVP-------MTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRR 161 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~-------~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~ 161 (314)
+|+|.|+|.+.+.. .......|.|.. +|.+.... +....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 162 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFE-PSEAEISHTQKATLVCLATGFFPDHVELSWWV 162 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeec-CCcccccCCCceEEEEEEccCcCCCEEEEEEE
Confidence 99999999997621 112233555554 33332221 111123346666666666653 323 455665
Q ss_pred CCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-------eeCCeee
Q psy15734 162 EDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-------LINGYSC 234 (314)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-------~~~~~~~ 234 (314)
++..+. ......... .++.|..
T Consensus 163 -~g~~l~--------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 191 (245)
T 3nfj_J 163 -NGKEVH--------------------------------------------------SGVCTDPQPLKEQPALNDSRYAL 191 (245)
T ss_dssp -TTEEEC--------------------------------------------------TTEEECSSCEESSSSSTTCCEEE
T ss_pred -CCEECC--------------------------------------------------CCcccccccccccccCCCCCEEE
Confidence 333321 111000000 1222555
Q ss_pred EEEEEEeecCCCC-CeEEEEEEeeCCCCcee
Q psy15734 235 HMTLKIRSILSHQ-FGSYRCVAVNALGETDG 264 (314)
Q Consensus 235 ~s~L~i~~~~~~d-~G~Y~C~a~n~~g~~~~ 264 (314)
.+.|.|.....+| .|.|+|.|.|.......
T Consensus 192 ~s~L~i~~~~~~d~g~~YtC~v~~~~~~~~~ 222 (245)
T 3nfj_J 192 SSRLRVSATFWQNPRNHFRCQVQFYGLSEND 222 (245)
T ss_dssp EEEEEEEHHHHTCTTCEEEEEEEECCBCSSS
T ss_pred EEEEEECHHHhccCCCeEEEEEEECCCCCcc
Confidence 6799999998888 66999999998765544
No 172
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.84 E-value=4.8e-20 Score=145.56 Aligned_cols=182 Identities=18% Similarity=0.271 Sum_probs=105.3
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEE---Eeee----eee--ecCcCEEEEeCC-ceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTIL---SIHH----KVV--TQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~---~~~~----~~~--~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +..+. .... ... ...+|+.+..+. ...++|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHK 85 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECC
Confidence 34567899999999999998765 6789999964 22211 1100 000 124577776542 3456899999
Q ss_pred ecCCCCeEEEEEEecCCC-----c----ceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceE
Q psy15734 94 VQETDRGWYMCQINTVPM-----T----SQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVA 158 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~-----~----~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~ 158 (314)
++.+|+|.|.|.+.+... . .....|.|.. +|.+.... +.. .+..|+.+.|.|.+.+. |.| .+.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~-~~~~g~~v~L~C~~~g~~P~p~~v~ 163 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLA-PSS-KSTSGGTAALGCLVKDYFPEPVTVS 163 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEEC-CCT-TCCCCCEEEEEEEEEEEBSSCCEEE
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEec-ccc-cccCCCcEEEEEEEEeEECCCeEEE
Confidence 999999999999976432 1 1233555553 12222211 010 12345555555555543 443 555
Q ss_pred EEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeee-ecCCceeeeEeeCCeeeEEE
Q psy15734 159 WRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMI-ITGDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 159 W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~s~ 237 (314)
|++ ++.... ..... ....++.|...+.
T Consensus 164 W~~--------------------------------------------------~~~~~~~~~~~~--~~~~~g~~~~~s~ 191 (225)
T 1op3_H 164 WNS--------------------------------------------------GALTSGVHTFPA--VLQSSGLYSLSSV 191 (225)
T ss_dssp CCT--------------------------------------------------TSCCTTCEECCC--EECTTSCEEEEEE
T ss_pred Eec--------------------------------------------------CCCcCCeEecCc--eeCCCCCEEEEEE
Confidence 554 322100 00000 0011222455668
Q ss_pred EEEeecCCCCCeEEEEEEeeCCCCce
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALGETD 263 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g~~~ 263 (314)
|.|.++..+| |.|+|.|.|..+...
T Consensus 192 L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 192 VTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp EEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred EEEechhcCC-CcEEEEEEcCCCCcc
Confidence 9999999889 999999999765433
No 173
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.84 E-value=2.4e-19 Score=143.00 Aligned_cols=190 Identities=17% Similarity=0.304 Sum_probs=112.1
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e---eEEEeee-e---eeecCcCEEEEeCCceeEEEEEee
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q---TILSIHH-K---VVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~---~~~~~~~-~---~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
+.+..++..+.+.+|++++|.|.+.+ +.+.+.|+|... . .+..... . .....+|+.+..+....++|.|.+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 45667788899999999999999976 677999999421 1 1111110 0 011235777776555567899999
Q ss_pred ecCCCCeEEEEEEecC----CCcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEc
Q psy15734 94 VQETDRGWYMCQINTV----PMTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRR 161 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~----~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~ 161 (314)
++.+|+|.|+|.+.+. ........|.|.. +|.+.... +....+..|+.+.|.|.+.+ .|.+ .+.|++
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 160 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFE-PSKAEIANKQKATLVCLARGFFPDHVELSWWV 160 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeC-CchhhcccCCceEEEEEEeeEECCCeEEEEEE
Confidence 9999999999999632 1112233455542 23332211 11222334555666666555 3333 455555
Q ss_pred CCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee--eeEeeC-CeeeEEEE
Q psy15734 162 EDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE--DSRLIN-GYSCHMTL 238 (314)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~--~~~~~~-~~~~~s~L 238 (314)
++.. +....... .....+ .|...+.|
T Consensus 161 -~g~~--------------------------------------------------l~~~~~~~~~~~~~~~g~~~~~s~L 189 (240)
T 3q5y_A 161 -NGKE--------------------------------------------------VHSGVSTDPQAYKESNYSYSLSSRL 189 (240)
T ss_dssp -TTEE--------------------------------------------------ECTTEEECSSCEEEETTEEEEEEEE
T ss_pred -CCEE--------------------------------------------------CcCcEecCCceeeCCCCCEEEEEEE
Confidence 3322 21111100 011222 25556789
Q ss_pred EEeecCCCC-CeEEEEEEeeCCCCcee
Q psy15734 239 KIRSILSHQ-FGSYRCVAVNALGETDG 264 (314)
Q Consensus 239 ~i~~~~~~d-~G~Y~C~a~n~~g~~~~ 264 (314)
.|.....+| .|.|+|.|.|.......
T Consensus 190 ~i~~~~~~d~~g~YtC~v~~~~~~~~~ 216 (240)
T 3q5y_A 190 RVSATFWHNPRNHFRCQVQFHGLSEED 216 (240)
T ss_dssp EEEHHHHSCTTCEEEEEEEECCBCTTS
T ss_pred EECHHHhccCCCEEEEEEEcCCCCCcc
Confidence 999999999 67999999997654433
No 174
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.83 E-value=1.3e-19 Score=148.71 Aligned_cols=170 Identities=18% Similarity=0.189 Sum_probs=123.0
Q ss_pred cceeEEecCceEEEEEEecccC-CCceEEEcCCCceeecCC-------------eeC-----------------------
Q psy15734 132 STDVVVREGTEVTLECSAVGYP-EPYVAWRREDGKAINYNG-------------ELV----------------------- 174 (314)
Q Consensus 132 ~~~~~~~~g~~~~l~C~~~~~p-~p~~~W~~~~~~~~~~~~-------------~~~----------------------- 174 (314)
+....+.+|+.+.|.|.+.+.| .+.+.|++.++..+.... .+.
T Consensus 9 p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~ 88 (291)
T 1qz1_A 9 PSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ 88 (291)
T ss_dssp SSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCE
T ss_pred CCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCe
Confidence 3566789999999999999886 689999985555443211 000
Q ss_pred -----------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeec
Q psy15734 175 -----------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 175 -----------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++.... ...........++ .|.|.++
T Consensus 89 ~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~-~~~~~~~~~~~~~-----~L~i~~~ 162 (291)
T 1qz1_A 89 SEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVI-LKKDVRFIVLSNN-----YLQIRGI 162 (291)
T ss_dssp EEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSS-TTCCTTEEECTTS-----CEEETTC
T ss_pred eEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcc-cCCCceEEEccCC-----cEEEccC
Confidence 6666667777789999999999999999999999999754433 2222233333444 8999999
Q ss_pred CCCCCeEEEEEEeeCCCCc--eeEEEEEEEecCCCee----EEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 244 LSHQFGSYRCVAVNALGET--DGFIKVYVNLVDGDIF----QIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~~~~~~----~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
..+|+|.|+|.|.|..+.. ...+.|.|..+|.... ....+..++...+.|.+.+.|.|.+.|..
T Consensus 163 ~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~ 232 (291)
T 1qz1_A 163 KKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTK 232 (291)
T ss_dssp CGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEE
T ss_pred ccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcEEEEE
Confidence 9999999999999976543 3456666665532111 11234455666799999999999999964
No 175
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.83 E-value=4.1e-19 Score=139.81 Aligned_cols=182 Identities=16% Similarity=0.302 Sum_probs=109.2
Q ss_pred CCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-eeE---EEeee--------eeeecCcCEEEEeCC-ceeEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENL--REYKVAWVKMIT-QTI---LSIHH--------KVVTQNKRVSITFND-HRSWFLHL 91 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~~~---~~~~~--------~~~~~~~~~~~~~~~-~~~~~L~i 91 (314)
.+..+.+.+|++++|.|.+.+. +...+.|+|... ..+ ..... ......+|+.+..+. ...++|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 3456789999999999999864 357999998532 111 11100 001124677776543 34568999
Q ss_pred eeecCCCCeEEEEEEecCC---CcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEecc-cCC-C-ceEEEc
Q psy15734 92 RDVQETDRGWYMCQINTVP---MTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVG-YPE-P-YVAWRR 161 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~---~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~-p-~~~W~~ 161 (314)
.+++.+|+|.|.|.+.+.. .......|.|.. +|.+.... +... .+|+.+.|.|.+.+ +|. + .+.|++
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~-~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~ 162 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLS-LCST--QPDGNVVIACLVQGFFPQEPLSVTWSE 162 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEE-CCSC--CCTTEEEEEEEEEEEBSSCSEEEEESC
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEec-Cccc--ccCCCEEEEEEEEeeECCCCEEEEEEE
Confidence 9999999999999997642 122334566542 23332111 1111 45666777777665 444 2 566665
Q ss_pred CCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeee-EeeCCeeeEEEEEE
Q psy15734 162 EDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDS-RLINGYSCHMTLKI 240 (314)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~-~~~~~~~~~s~L~i 240 (314)
++..+ ..... .... ..++.|...+.|.|
T Consensus 163 -~g~~~-------------------------------------------------~~~~~-~~~~~~~~~~~~~~s~L~i 191 (221)
T 3m8o_H 163 -SGQGV-------------------------------------------------TARNF-PPSQDASGDLYTTSSQLTL 191 (221)
T ss_dssp -CSTTC-------------------------------------------------EEEEC-CCEECSSSSCEEEEEEEEE
T ss_pred -CCEEC-------------------------------------------------ceEEc-CceeeCCCCcEEEEEEEEE
Confidence 33221 10000 0000 01222455568999
Q ss_pred eecCCCCCeEEEEEEeeCCCCc
Q psy15734 241 RSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
.+...+|.|.|+|.|.|..+..
T Consensus 192 ~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 192 PATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EGGGSCTTCEEEEEEEETTSCC
T ss_pred CHHHcCCCCeEEEEEEECCCCc
Confidence 9999999999999999987643
No 176
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.83 E-value=1.7e-19 Score=145.25 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=61.9
Q ss_pred CCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-ee---EEEeee-eeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 27 PVANVTATVGKEALMACVVENL--REYKVAWVKMIT-QT---ILSIHH-KVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+..+.+.+|++++|.|.+.+. +.+.+.|+|.+. .. +..... .......|+.+.... ..++|.|.+++.+|+
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 8 QPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG-TSASLAITGLQSEDE 86 (256)
T ss_dssp CCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET-TEEEEEECSCCGGGC
T ss_pred cCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC-CEEEEEECCCChhhC
Confidence 3446889999999999999876 678999999532 11 111000 001123566665433 345899999999999
Q ss_pred eEEEEEEecCCC----cceeEEEEEEeCC
Q psy15734 100 GWYMCQINTVPM----TSQKGYLQVVVPP 124 (314)
Q Consensus 100 G~Y~C~~~~~~~----~~~~~~l~v~~~p 124 (314)
|.|+|.+.+... ......|.|..++
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC---
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECCC
Confidence 999999976421 2233466666544
No 177
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.83 E-value=1.4e-20 Score=148.29 Aligned_cols=188 Identities=15% Similarity=0.205 Sum_probs=120.1
Q ss_pred CCcceEEEcCCcEEEEEEecC-CC----ceEEEEEEcCceeEEE--e--eeeeeecCcCEEEEeC----CceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVEN-LR----EYKVAWVKMITQTILS--I--HHKVVTQNKRVSITFN----DHRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~-~~----~~~v~W~~~~~~~~~~--~--~~~~~~~~~~~~~~~~----~~~~~~L~i~~ 93 (314)
.+..+.+.+|+++.|.|.+.+ .+ ...+.|++++...... . ....+...+|+.+..+ ....++|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 345677889999999999954 33 2459999964321110 0 0111222456666542 12345899999
Q ss_pred ecCCCCeEEEEEEecC--CCcceeEEEEEEeCCceeeecCcceeEEecCceE-EEEEEec-ccCCCceEEEcCCCceeec
Q psy15734 94 VQETDRGWYMCQINTV--PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEV-TLECSAV-GYPEPYVAWRREDGKAINY 169 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~--~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~-~l~C~~~-~~p~p~~~W~~~~~~~~~~ 169 (314)
++.+|+|.|+|.+.+. +.....+.|.|.++|.+....... . .+|+.+ .|.|.+. ++|.|.+.|++ ++..
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~--~-~~g~~~~~l~C~~~~g~P~p~v~W~k-~~~~--- 157 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKV--Q-LTGEPVPMARCVSTGGRPPAQITWHS-DLGG--- 157 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECC--C-CCSSSCCEEEEEEESCSSCCCEEEEC-SSSC---
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCc--c-cCCceEEEEEEECCCccCCCeeEEEe-CCCC---
Confidence 9999999999999764 444556677787788776443111 1 567777 4888876 77888888887 2211
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
... . .. ......+.+...+.|.|.++..+|.|
T Consensus 158 ---------------------------------------------~~~-~-~~-~~~~~~~~~~~~s~L~i~~~~~~d~g 189 (221)
T 3eow_R 158 ---------------------------------------------MPQ-T-SQ-VPGFLSGTVTVTSLWILVPSSQVDGK 189 (221)
T ss_dssp ---------------------------------------------CCC-C-EE-ECCCCBTTBCCEEEEECCCCSCCCCC
T ss_pred ---------------------------------------------CCc-c-ce-eecCCCCcEEEEEEEEEeCCHHHCCC
Confidence 000 0 00 00001122334569999999999999
Q ss_pred EEEEEEeeCCCCceeEEEEE
Q psy15734 250 SYRCVAVNALGETDGFIKVY 269 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~~~~~l~ 269 (314)
.|+|.|.|..+.....+.|.
T Consensus 190 ~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 190 QVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp CEEEEECCSCSSSCEEEEEC
T ss_pred eEEEEEECCCCCCCeEEEEE
Confidence 99999999988766665543
No 178
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.83 E-value=6.1e-20 Score=142.61 Aligned_cols=186 Identities=16% Similarity=0.153 Sum_probs=101.1
Q ss_pred EEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCCCc
Q psy15734 33 ATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVPMT 112 (314)
Q Consensus 33 v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 112 (314)
+.+|++++|.|.+ +.+.+.|+|+ +..+... .. ....|.|.+++.+|+|.|+|.+.+..
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~-g~~l~~~-----~~-----------~~~~L~i~~v~~~DsG~Y~C~~~~~~-- 72 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKD-GKMIGFL-----TE-----------DKKKWNLGSNAKDPRGMYQCKGSQNK-- 72 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEET-TEEEEEE-----ES-----------SCCCEEEEEGGGCCEEEEEEESSSSC--
T ss_pred ecCCCeEEEEEcC---CCCEEEEEEC-CEECCCC-----CC-----------CCCeEEeCCCCcCCCEEEEEEecCCC--
Confidence 3579999999998 6789999994 4433211 00 11269999999999999999974422
Q ss_pred ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEcCCCcceee-cCc
Q psy15734 113 SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAF-VSQ 191 (314)
Q Consensus 113 ~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~-~g~ 191 (314)
+..+.|.+...+...............-+.. ...+.....- ++.+...+ ..+. +|+
T Consensus 73 s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------------~~~~~~~p--~~v~~~G~ 129 (204)
T 1sy6_A 73 SKPLQVYYRMGSADDAKKDAAKKDDAKKDDA----KKDGSDGNEE-----------------MGGITQTP--YKVSISGT 129 (204)
T ss_dssp CCCEEEEEEC---------------------------------------------------------CCC--CEEEEETT
T ss_pred CeeEEEEEEEecccccccccccccccccccc----cccccccccc-----------------ccceecCC--ceeeecCC
Confidence 2223444431110000000000000000000 0000000000 00000011 1233 788
Q ss_pred cEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeec-CCCCCeEEEEEEeeCCCCc-eeEEEEE
Q psy15734 192 TVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSI-LSHQFGSYRCVAVNALGET-DGFIKVY 269 (314)
Q Consensus 192 ~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~ 269 (314)
++.|.|. |.|.|.+.|++++..+........+ ...++ .|.|.++ +.+|+|.|+|.|.|..|.. +..+.|+
T Consensus 130 ~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~-~~~~~-----~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~ 201 (204)
T 1sy6_A 130 TVILTCP--QYPGSEILWQHNDKNIGGDEDDKNI-GSDED-----HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLR 201 (204)
T ss_dssp EEEEECS--CCCSSCEEEEETTEEESCCTTCTTE-EEETT-----EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEE
T ss_pred cEEEEcC--CCCCCceEEEECCEECCCccCCceE-ecCCC-----EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEE
Confidence 8888888 7788888888864433222122222 12344 9999999 9999999999999999963 5666665
Q ss_pred EE
Q psy15734 270 VN 271 (314)
Q Consensus 270 V~ 271 (314)
|.
T Consensus 202 ~~ 203 (204)
T 1sy6_A 202 AR 203 (204)
T ss_dssp EC
T ss_pred Ee
Confidence 53
No 179
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.83 E-value=1.9e-19 Score=139.51 Aligned_cols=126 Identities=19% Similarity=0.321 Sum_probs=75.0
Q ss_pred ceEEEcCCcEEEEEEecC----CCceEEEEEEcCceeEEEe-eeee---eecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 30 NVTATVGKEALMACVVEN----LREYKVAWVKMITQTILSI-HHKV---VTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~----~~~~~v~W~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
.+.+.+|+++.|.|.+.+ .+.+.+.|++++ ..+... .... .....|..+... ..++|.|.+++.+|+|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~-~~i~~~~~~~~~~~~~~~~r~~~~~~--~~~~L~I~~v~~~D~G~ 79 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEK-KMVLTMMSGDMNIWPEYKNRTIFDIT--NNLSIVILALRPSDEGT 79 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETT-EEEEEEETTEEEECHHHHTTEEEEST--TTTEEEECSCCGGGCEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCC-cEEEEEeCCceeecCcccceeEEccC--CCcEEEEecccchhCeE
Confidence 578999999999999953 355799999954 333211 1100 011234443221 23479999999999999
Q ss_pred EEEEEecCC-Cc-----ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEec-ccCCCceEEEc
Q psy15734 102 YMCQINTVP-MT-----SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAV-GYPEPYVAWRR 161 (314)
Q Consensus 102 Y~C~~~~~~-~~-----~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~ 161 (314)
|+|.+.+.. .. ...+.|.|..++..... .......|+.+.|.|.+. ++|.|.+.|++
T Consensus 80 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~---~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k 143 (201)
T 1dr9_A 80 YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSI---SDFEIPTSNIRRIICSTSGGFPEPHLSWLE 143 (201)
T ss_dssp EEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEE---EEEECSSTTEEEEEEEEEEESSCEEEEEEE
T ss_pred EEEEEEcCCCCccccccccEEEEEEcCCCCCCce---EeccCCCCCeEEEEEecCCccCCCEEEEEE
Confidence 999997742 22 23455666554211100 001113466667777763 66666777776
No 180
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.83 E-value=2.3e-19 Score=145.54 Aligned_cols=199 Identities=15% Similarity=0.223 Sum_probs=117.0
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC--ce--eEEEeee-eeeec----CcCEEEEeCCceeEEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI--TQ--TILSIHH-KVVTQ----NKRVSITFNDHRSWFLH 90 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~--~~--~~~~~~~-~~~~~----~~~~~~~~~~~~~~~L~ 90 (314)
..+.+..++..+.+.+|++++|.|.+. .+.+.+.|+|.. .. .+..... ..... ++|+.+..+....++|.
T Consensus 25 ~~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (268)
T 3pl6_D 25 GGAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLK 103 (268)
T ss_dssp --SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEE
T ss_pred cCceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEE
Confidence 346677788889999999999999987 466899999942 11 1111110 00111 16777776545567899
Q ss_pred EeeecCCCCeEEEEEEecC---CCcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecccCC-C-ceEE
Q psy15734 91 LRDVQETDRGWYMCQINTV---PMTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGYPE-P-YVAW 159 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~---~~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~-p-~~~W 159 (314)
|.+++.+|+|.|+|.+.+. ........|.|.. +|.+.... +....+..|+.++|.|.+.+.++ + .+.|
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 182 (268)
T 3pl6_D 104 IQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSW 182 (268)
T ss_dssp ECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeC-CCcccccCCCceEEEEEECcccCCCeEEEE
Confidence 9999999999999999753 1222334566654 34333221 22223345677777777766433 3 6677
Q ss_pred EcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEE
Q psy15734 160 RREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~ 239 (314)
++ ++..+.......+.. ... .....++.|...+.|.
T Consensus 183 ~~-~g~~l~~~~~~~~~~---------------------------------------~~~----~~~~~~~~~~~~s~l~ 218 (268)
T 3pl6_D 183 WV-NGKEVHSGVCTDPQP---------------------------------------LKE----QPALNDSRYSLSSRLR 218 (268)
T ss_dssp EE-SSSEECTTEEECSSC---------------------------------------EES----STTCTTCCEEEEEEEE
T ss_pred EE-CCEECCCCeEecccc---------------------------------------ccc----cccCCCCcEEEEEEEE
Confidence 76 443332110000000 000 0000122245556899
Q ss_pred EeecCCCC-CeEEEEEEeeCCCCcee
Q psy15734 240 IRSILSHQ-FGSYRCVAVNALGETDG 264 (314)
Q Consensus 240 i~~~~~~d-~G~Y~C~a~n~~g~~~~ 264 (314)
|.....+| .|.|+|.|.|.......
T Consensus 219 i~~~~~~d~~g~YtC~v~~~~l~~~~ 244 (268)
T 3pl6_D 219 VSATFWQNPRNHFRCQVQFYGLSEND 244 (268)
T ss_dssp EEHHHHSCTTCEEEEEEEECCBCTTS
T ss_pred EcHHHhccCCCEEEEEEEcCCCCCCc
Confidence 99998888 99999999998755433
No 181
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.83 E-value=1.2e-19 Score=143.55 Aligned_cols=186 Identities=18% Similarity=0.226 Sum_probs=107.0
Q ss_pred CcceEEEcCCcEEEEEEecCCCc----eEEEEEEcC-cee---EEEeee---eee--ecCcCEEEEeCC-ceeEEEEEee
Q psy15734 28 VANVTATVGKEALMACVVENLRE----YKVAWVKMI-TQT---ILSIHH---KVV--TQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~~----~~v~W~~~~-~~~---~~~~~~---~~~--~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
+..+.+.+|++++|.|.+.+.+. +.+.|+|.+ +.. +..... ... ...+|+.+..+. ...++|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 55678999999999999987664 799999863 221 111100 000 123577766532 2346899999
Q ss_pred ecCCCCeEEEEEEecCCC------c----ceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ce
Q psy15734 94 VQETDRGWYMCQINTVPM------T----SQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YV 157 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~------~----~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~ 157 (314)
++.+|+|.|.|.+.+... . .....|.|.. +|.+.... ....+.+|+.+.|.|.+.+. |.| .+
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~~~~~~~g~~~~l~C~~~g~~P~p~~v 164 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLA--PVCGDTTGSSVTLGCLVKGYFPEPVTL 164 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEEC--C-----CCSEEEEEEEEEEEBSSCCEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEec--ccccccCCCCEEEEEEEccEeCCCEEE
Confidence 999999999999965431 1 1224555542 23332221 11123455556666665553 444 55
Q ss_pred EEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEE
Q psy15734 158 AWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 158 ~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 237 (314)
.|++ ++....... ...+ ...+.|...+.
T Consensus 165 ~W~~--------------------------------------------------~~~~~~~~~-~~~~-~~~~~~~~~s~ 192 (228)
T 3bae_H 165 TWNS--------------------------------------------------GSLSSGVHT-FPAV-LQSDLYTLSSS 192 (228)
T ss_dssp EEGG--------------------------------------------------GTCCTTEEE-EEEE-EETTEEEEEEE
T ss_pred EEee--------------------------------------------------CCcccCceE-cCce-eCCCcEEEEEE
Confidence 5555 322100000 0000 01122445568
Q ss_pred EEEeecCCCCCeEEEEEEeeCCCCceeEEEE
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALGETDGFIKV 268 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 268 (314)
|.|.++..+| |.|+|.|.|..+.......+
T Consensus 193 L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 193 VTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp EEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 9999988866 99999999998876554443
No 182
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.83 E-value=4.3e-19 Score=140.76 Aligned_cols=194 Identities=16% Similarity=0.223 Sum_probs=109.6
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ce---eEEEeee---eee--ecCcCEEEEeC-CceeEEEEEeee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQ---TILSIHH---KVV--TQNKRVSITFN-DHRSWFLHLRDV 94 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~---~~~~~~~---~~~--~~~~~~~~~~~-~~~~~~L~i~~~ 94 (314)
.+..+.+.+|++++|.|.+.+.+ ...+.|||.. +. .+..... ... ...+|+.+..+ ....++|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (232)
T 1dn0_B 6 QWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSV 85 (232)
T ss_dssp EECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCC
Confidence 34567899999999999997653 5789999964 22 1211110 001 12467777654 234568999999
Q ss_pred cCCCCeEEEEEEec-CC--C----cceeEEEEEEe----CCceeeecCcceeEEecC-ceEEEEEEeccc-CCC-ceEEE
Q psy15734 95 QETDRGWYMCQINT-VP--M----TSQKGYLQVVV----PPRILLDRTSTDVVVREG-TEVTLECSAVGY-PEP-YVAWR 160 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~-~~--~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g-~~~~l~C~~~~~-p~p-~~~W~ 160 (314)
+.+|+|.|.|.+.+ .+ . ......|.|.. +|.+.... + ...+..| +.+.|.|.+.+. |.| .+.|+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-p-~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~ 163 (232)
T 1dn0_B 86 TAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLV-S-CENSPSDTSSVAVGCLAQDFLPDSITFSWK 163 (232)
T ss_dssp CGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEE-C-C------CCSEEEEEEEEEEBSSCCEEEEE
T ss_pred CcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEec-c-ccccCCCCCcEEEEEEEEEEeCCCeEEEEE
Confidence 99999999999963 11 1 11234566654 13222211 1 1112345 556666665553 444 55565
Q ss_pred cCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEE
Q psy15734 161 REDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i 240 (314)
+.++.. +.....+......+.|...+.|.|
T Consensus 164 ~~~g~~--------------------------------------------------l~~~~~~~~~~~~~~~~~~s~L~i 193 (232)
T 1dn0_B 164 YKNNSD--------------------------------------------------ISSTRGFPSVLRGGKYAATSQVLL 193 (232)
T ss_dssp ETTSCE--------------------------------------------------ECCEEECCCEEETTEEEEEEEEEE
T ss_pred cCCCCc--------------------------------------------------eeeEEECCccccCCcEEEEEEEEE
Confidence 532222 111000000011122555678999
Q ss_pred eecCC--CCCeEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 241 RSILS--HQFGSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 241 ~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
.+... +|.|.|+|.|.|..+.......|.|..
T Consensus 194 ~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~~ 227 (232)
T 1dn0_B 194 PSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVIA 227 (232)
T ss_dssp CTTCC---CCCEEEEEEECTTCCEEEEEECCC--
T ss_pred cHHHhcccCCCeEEEEEEeCCCCcceeEecCCCC
Confidence 98887 899999999999998876666665543
No 183
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.82 E-value=2.3e-19 Score=145.70 Aligned_cols=198 Identities=18% Similarity=0.300 Sum_probs=115.0
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-cee---EEEeeee-eeec----CcCEEEEeCCceeEEEEE
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQT---ILSIHHK-VVTQ----NKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~---~~~~~~~-~~~~----~~~~~~~~~~~~~~~L~i 91 (314)
.+.+..++..+.+.+|++++|.|.+.+ +.+.+.|+|.. +.. +...... .... +.|+.+.......++|.|
T Consensus 27 ~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I 105 (270)
T 3qib_D 27 GMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEI 105 (270)
T ss_dssp -CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEE
T ss_pred ceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEE
Confidence 456677788899999999999999866 66799999843 111 1111000 0000 116666554445668999
Q ss_pred eeecCCCCeEEEEEEecCC-----CcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceE
Q psy15734 92 RDVQETDRGWYMCQINTVP-----MTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVA 158 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~ 158 (314)
.+++.+|+|.|.|.+.+.. .......|.|.. +|.+.... +....+..|+.++|.|.+.+ .|.| .+.
T Consensus 106 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 184 (270)
T 3qib_D 106 QSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELS 184 (270)
T ss_dssp SSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEEC-CCccccccCCceEEEEEecceeCCCeEEE
Confidence 9999999999999997532 112234566654 34333221 11222334667777777666 4544 566
Q ss_pred EEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEE
Q psy15734 159 WRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTL 238 (314)
Q Consensus 159 W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L 238 (314)
|++ ++..+.......+. .... .....++.|...+.|
T Consensus 185 W~k-~g~~l~~~~~~~~~---------------------------------------~~~~----~~~~~~~~~~~~s~L 220 (270)
T 3qib_D 185 WWV-NGKEVHSGVCTDPQ---------------------------------------PLKE----QPALNDSRYALSSRL 220 (270)
T ss_dssp EEE-TTEEECTTEEECSS---------------------------------------CEES----CTTSSSCCEEEEEEE
T ss_pred EEE-CCEECCCCcccccc---------------------------------------cccc----cccCCCCCEEEEEEE
Confidence 766 44333211000000 0000 000012224555689
Q ss_pred EEeecCCCC-CeEEEEEEeeCCCCcee
Q psy15734 239 KIRSILSHQ-FGSYRCVAVNALGETDG 264 (314)
Q Consensus 239 ~i~~~~~~d-~G~Y~C~a~n~~g~~~~ 264 (314)
.|.....+| .|.|+|.|.|.......
T Consensus 221 ~i~~~~~~d~~g~YtC~v~~~~l~~~~ 247 (270)
T 3qib_D 221 RVSATFWQNPRNHFRCQVQFYGLSEND 247 (270)
T ss_dssp EEEHHHHHSTTCEEEEEEEECCBCTTS
T ss_pred EEcHHHhccCCCeEEEEEEecCCCCcc
Confidence 999998888 99999999998765443
No 184
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.82 E-value=2.8e-19 Score=135.96 Aligned_cols=123 Identities=20% Similarity=0.260 Sum_probs=77.3
Q ss_pred CcceEEEcCCcEEEEEEecC-CCceEEEEEEcCceeEEEeeee----eeecC--cCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 28 VANVTATVGKEALMACVVEN-LREYKVAWVKMITQTILSIHHK----VVTQN--KRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~-~~~~~v~W~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
...+.+.+|++++|.|.+.. .+.+.+.|++.+...+...... ..... +|+.+. ..+++|.|.+++.+|+|
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~---~~~~sL~I~~v~~~D~G 82 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD---KTNGALRIYNVSKEDRG 82 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC---TTTCCEEECSCCGGGCE
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe---CCCccEEEcCCCHHHCe
Confidence 45688999999999999854 3468999999533333321110 11122 466652 22347999999999999
Q ss_pred EEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEe-cccCCCceEEEc
Q psy15734 101 WYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSA-VGYPEPYVAWRR 161 (314)
Q Consensus 101 ~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~~~p~p~~~W~~ 161 (314)
.|+|.+.+.......+.|.|.+++... ... ..++.+.|.|.+ .+ |.|.+.|++
T Consensus 83 ~Y~C~v~~~~~~~~~~~L~V~~~~~~P------~i~-~~~~~v~L~C~~~~g-p~p~i~W~~ 136 (180)
T 2dru_A 83 DYYMRMLHETEDQWKITMEVYEMVSKP------MIY-WECSNATLTCEVLEG-TDVELKLYQ 136 (180)
T ss_dssp EEEEEEESSSEEEEEEEEEEECCCCCC------EEE-EEGGGTEEEEECSSC-TTCEEEEEE
T ss_pred EEEEEEEcCCeEEEEEEEEEECCCCCC------EEE-ecCCCEEEEEEeCCC-CCCEEEEEE
Confidence 999998654433455667776543211 111 133457777776 44 666777776
No 185
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.82 E-value=3.2e-19 Score=145.56 Aligned_cols=89 Identities=12% Similarity=0.270 Sum_probs=65.6
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-ee---EEEeee--e-ee---ecCcCEEEEeCCceeEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QT---ILSIHH--K-VV---TQNKRVSITFNDHRSWFL 89 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~---~~~~~~--~-~~---~~~~~~~~~~~~~~~~~L 89 (314)
..+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+. .. +..... . .. ....|+.+..+....++|
T Consensus 23 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (279)
T 2wbj_D 23 GGAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTL 102 (279)
T ss_dssp CCCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEE
T ss_pred ccceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEE
Confidence 35667778889999999999999999887889999999642 11 111110 0 00 124577777654456689
Q ss_pred EEeeecCCCCeEEEEEEec
Q psy15734 90 HLRDVQETDRGWYMCQINT 108 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~ 108 (314)
.|.+++.+|+|.|+|.+.+
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~ 121 (279)
T 2wbj_D 103 TVTSAHPEDSSFYICSARD 121 (279)
T ss_dssp EESSCCGGGCEEEEEEEEE
T ss_pred EEccCCccCCEEEEEEEcc
Confidence 9999999999999999976
No 186
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.82 E-value=5.9e-20 Score=140.61 Aligned_cols=169 Identities=18% Similarity=0.239 Sum_probs=97.8
Q ss_pred eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEee-ecCCCCeEEEEEEecC
Q psy15734 31 VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRD-VQETDRGWYMCQINTV 109 (314)
Q Consensus 31 ~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~~~~~ 109 (314)
..+.+|+++.|.|.+.+ +. .+.|+|++ ..+. .+ ...+|.|.+ ++.+|+|.|+|.+.|.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~-~i~W~k~g-~~l~--------~~----------~~~~L~I~~~~~~~D~G~Y~C~a~n~ 67 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DE-NLKWEKNG-QELP--------QK----------HDKHLVLQDFSEVEDSGYYVCYTPAS 67 (186)
T ss_dssp EEEEETTEEEEECSSCC-CT-TCEEEETT-EEEC--------SC----------CCSEEEEESCCTTTSCEEEEEECSSC
T ss_pred EEEeCCcEEEEEEeCCC-CC-ceEEEECC-EECC--------CC----------CCCEEEECCCCccccCEEEEEEEEeC
Confidence 34578999999999987 43 49999954 3321 11 012799999 9999999999999765
Q ss_pred -CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCeeCCCeEEcCCCcceee
Q psy15734 110 -PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAF 188 (314)
Q Consensus 110 -~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 188 (314)
+.......+.|...+..... ... ... ......+.+.-...... .......+.
T Consensus 68 ~g~~~~~~~~~v~~~~~~~~~--~~~--~~~---------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 120 (186)
T 1jbj_A 68 NKNTYLYLKARVGSADDAKKD--AAK--KDD---------AKKDDAKKDGSQTNKAK--------------NLVQVDGSR 120 (186)
T ss_dssp CCCCCEEECCCCCSCCCCCCC--CCC--CCC---------CSCCSSSTTCCSCCCCS--------------SCCEECCCS
T ss_pred CCcEEEEEEEEEecccccccc--ccc--ccc---------cccCCcccccccccccc--------------ccccceecC
Confidence 33233333333221110000 000 000 00000010000000000 000012345
Q ss_pred cCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 189 VSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 189 ~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
+|+++.|.|.+ |.|.+.|++++. .+..... ... .|.|.++..+|+|.|+|.|.|..|..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k~g~-~i~~~~~------~~~-----~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLKDGS-IISPLNA------TKN-----TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEETTE-ECCCSSC------CSS-----CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEeeC---CCCeEEEEECCE-ECcccCC------Ccc-----eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 89999999988 888999999743 3322111 222 89999999999999999999998865
No 187
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.82 E-value=5.3e-21 Score=151.87 Aligned_cols=188 Identities=15% Similarity=0.240 Sum_probs=93.6
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-eeE--EEeee--eeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QTI--LSIHH--KVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
..+.+..++..+.+.+|++++|.|.+.+.+.+.+.|+|.+. ..+ ..... .......|+.+.. .....+|.|.++
T Consensus 22 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 100 (233)
T 3bqu_C 22 AETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG-YGTDFVFTIENM 100 (233)
T ss_dssp -CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE-EEEEEEEC----
T ss_pred cceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec-cCCEEEEEECCC
Confidence 35666666888999999999999999876667899998642 211 11000 0001123333322 122347999999
Q ss_pred cCCCCeEEEEEEecCCCc--ceeEEEEEEe---CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCcee
Q psy15734 95 QETDRGWYMCQINTVPMT--SQKGYLQVVV---PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKAI 167 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~--~~~~~l~v~~---~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~~ 167 (314)
+.+|+|.|.|.+.+.... .....|.|.. +|.+...+. .....+|+.++|.|.+.+. |.+ .+.|++ ++..+
T Consensus 101 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~ 177 (233)
T 3bqu_C 101 LSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPP--SSEQLTSGGASVVCFLNNFYPKDINVKWKI-DGSER 177 (233)
T ss_dssp -CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCEEEEEEE-C----
T ss_pred CHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCC--CHHhhcCCceEEEEEEccccCCceEEEEEE-CCeeC
Confidence 999999999999654221 1122445543 344433221 1112356677777777664 332 567776 33321
Q ss_pred ecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC--CceeeeE-eeCCeeeEEEEEEeecC
Q psy15734 168 NYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG--DDYEDSR-LINGYSCHMTLKIRSIL 244 (314)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~L~i~~~~ 244 (314)
. .. ....... .++.|...+.|.|..+.
T Consensus 178 ~--------------------------------------------------~~~~~~~~~~~~~~~~~~~~s~L~i~~~~ 207 (233)
T 3bqu_C 178 Q--------------------------------------------------NGVLNSWTDQDSKDSTYSMSSTLTLTKDE 207 (233)
T ss_dssp ---------------------------------------------------CCEEEEECCCCTTTCCEEEEEEEEEEHHH
T ss_pred C--------------------------------------------------CCceEecCCccCCCCCEEEEEEEEECHHH
Confidence 1 10 0000000 11224455699999999
Q ss_pred CCCCeEEEEEEeeCCCC
Q psy15734 245 SHQFGSYRCVAVNALGE 261 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~ 261 (314)
.+|+|.|+|.|.|....
T Consensus 208 ~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 208 YERHNSYTCEATHKTST 224 (233)
T ss_dssp HHTCCCEEEEEEEC---
T ss_pred hCCCCCEEEEEEeCCCC
Confidence 99999999999997654
No 188
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.82 E-value=2.6e-19 Score=143.96 Aligned_cols=190 Identities=16% Similarity=0.293 Sum_probs=112.3
Q ss_pred CCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-eeE--E-Eeee------eeeecCcCEEEEeCC-ceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENL--REYKVAWVKMIT-QTI--L-SIHH------KVVTQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~~~--~-~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+. +...+.|+|... ... . .... ......+|+.+..+. ...++|.|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 4557889999999999999763 357899999542 111 1 1000 001123577776543 3456899999
Q ss_pred ecCCCCeEEEEEEecCC-----CcceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEcC
Q psy15734 94 VQETDRGWYMCQINTVP-----MTSQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRRE 162 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~-----~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~~ 162 (314)
++.+|+|.|.|.+.+.. .......|.|. .+|.+.... ....+..|+.+.|.|.+.+ +|.+ .+.|++
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~- 162 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS- 162 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEEC--C------CCEEEEEEEEEEEBSSCCEEEEGG-
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEec--CCcccCCCCcEEEEEEEeeEeCCCeEEEEEe-
Confidence 99999999999996532 11222356654 233333221 1223445666677776665 4544 566665
Q ss_pred CCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEee
Q psy15734 163 DGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
++.. ...... ......+.|...+.|.|.+
T Consensus 163 ~~~~-------------------------------------------------~~~~~~--~~~~~~g~~~~~s~L~i~~ 191 (253)
T 3liz_H 163 GSLS-------------------------------------------------SGVHTF--PAVLQSDLYTLSSSVTVPS 191 (253)
T ss_dssp GTBC-------------------------------------------------TTEEEC--CCEEETTEEEEEEEEEEET
T ss_pred CCee-------------------------------------------------cceEeC--CccccCCeEEEEEEEEEcH
Confidence 2211 000000 0001112345556999999
Q ss_pred cCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 243 ILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
...+| |.|+|.|.|..+.......|.+.
T Consensus 192 ~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 192 STWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred HHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 99999 99999999998877666666554
No 189
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.82 E-value=3.5e-20 Score=147.22 Aligned_cols=192 Identities=18% Similarity=0.268 Sum_probs=111.1
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCC-ce-EEEEEEcC-ceeE--EEeee--eeeecCcCEEEEeCCceeEEEEEee
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLR-EY-KVAWVKMI-TQTI--LSIHH--KVVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~-~v~W~~~~-~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
.+.+.. +..+.+.+|++++|.|.+.+.+ .+ .+.|+|.+ +..+ ..... .......|+..... ...++|.|.+
T Consensus 20 ~~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~L~I~~ 97 (234)
T 2j6e_L 20 QSVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKS-GTSASLAISG 97 (234)
T ss_dssp CCCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEE-TTEEEEEEES
T ss_pred ccEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEec-CCeEEEEECC
Confidence 344444 7778899999999999998743 33 79999964 2211 11000 00111346665542 2345899999
Q ss_pred ecCCCCeEEEEEEecCCCc----ceeEEEEEE----eCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCC
Q psy15734 94 VQETDRGWYMCQINTVPMT----SQKGYLQVV----VPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRRED 163 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~~----~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~ 163 (314)
++.+|+|.|+|.+.+.... .....|.|. .+|.+.... ......+|+.++|.|.+.+. |+ +.+.|++ +
T Consensus 98 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~--~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~ 174 (234)
T 2j6e_L 98 LRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFP--PSSEELQANKATLVCLISDFFPGAVTVAWKA-D 174 (234)
T ss_dssp CCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEEC--CCHHHHTTSCCCEEECCCBCSSCCCEEEEEE-T
T ss_pred CCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccC--CChhHhcCCceEEEEEEEEEcCCceEEEEEE-C
Confidence 9999999999999765431 112334442 233333221 11112245666777766664 32 2666666 4
Q ss_pred CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eeeE-eeCCeeeEEEEEEe
Q psy15734 164 GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDSR-LINGYSCHMTLKIR 241 (314)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~~-~~~~~~~~s~L~i~ 241 (314)
+..+. ..... .... .++.|...+.|.|.
T Consensus 175 g~~l~--------------------------------------------------~~~~~~~~~~~~~~~~~~~s~L~i~ 204 (234)
T 2j6e_L 175 GAPVK--------------------------------------------------AGVETTKPSKQSNNKYAASSYLSLT 204 (234)
T ss_dssp TEECC--------------------------------------------------SSEEECCCCCCTTSCCBCCEEECCC
T ss_pred CEECC--------------------------------------------------CCccccCceECCCCCEEEEEEEEEC
Confidence 33221 10000 0000 11123344689999
Q ss_pred ecCCCCCeEEEEEEeeCCCCceeEEE
Q psy15734 242 SILSHQFGSYRCVAVNALGETDGFIK 267 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~~~~~ 267 (314)
++..+|+|.|+|.|.|..+...+++.
T Consensus 205 ~~~~~d~G~Y~C~a~n~~~~~~~~~~ 230 (234)
T 2j6e_L 205 PEQWKSHRSYSCQVTHEGSTVEKTVA 230 (234)
T ss_dssp GGGTTTSCCEEEEEEBTTBCCCEEEC
T ss_pred HHHcCCCCeEEEEEEeCCCceEEecc
Confidence 99999999999999999877655543
No 190
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.81 E-value=8.9e-19 Score=142.91 Aligned_cols=192 Identities=17% Similarity=0.286 Sum_probs=115.4
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCce----eEEEee------eeeeecCcCEEEEeC-CceeEEE
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENL--REYKVAWVKMITQ----TILSIH------HKVVTQNKRVSITFN-DHRSWFL 89 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~~----~~~~~~------~~~~~~~~~~~~~~~-~~~~~~L 89 (314)
.+.. +..+.+.+|++++|.|.+.+. +.+.+.|+|.... .+.... ........|+.+..+ ....++|
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 81 (280)
T 3fku_X 3 QLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYM 81 (280)
T ss_dssp CEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEE
T ss_pred eEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEE
Confidence 3444 678899999999999999764 5579999985311 111111 001112357777643 3345689
Q ss_pred EEeeecCCCCeEEEEEEecC----------CCcceeEEEEEEe---------------CCceeeecCcceeEEecCceEE
Q psy15734 90 HLRDVQETDRGWYMCQINTV----------PMTSQKGYLQVVV---------------PPRILLDRTSTDVVVREGTEVT 144 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~----------~~~~~~~~l~v~~---------------~p~~~~~~~~~~~~~~~g~~~~ 144 (314)
.|.+++.+|+|.|+|.+.+. ........|.|.. ++.+... +. ..+.+|++++
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~--p~-~~v~~G~~v~ 158 (280)
T 3fku_X 82 DLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQP--PS-VSKGLRQTAT 158 (280)
T ss_dssp EECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCC--SE-EEECTTCCEE
T ss_pred EECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeC--Cc-EEEecCCCEE
Confidence 99999999999999999654 1112234566655 2222221 23 6788888999
Q ss_pred EEEEecc-cC-CCceEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCc
Q psy15734 145 LECSAVG-YP-EPYVAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDD 222 (314)
Q Consensus 145 l~C~~~~-~p-~p~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~ 222 (314)
|.|.+.+ .+ .+.+.|++..... . ...+.+.. .........+
T Consensus 159 L~C~~~~~~~~~~~v~W~r~~~~~-------------------------~-----------~~~l~~~~-~~~~~~~~~r 201 (280)
T 3fku_X 159 LTCTGNSNNVGNQGAAWLQQHQGH-------------------------P-----------PKLLSYRN-NDRPSGISER 201 (280)
T ss_dssp EEEECCCCCCCTTCCEEEEECSSS-------------------------C-----------CEESCCTT-CCCCSSSCTT
T ss_pred EEEEecCCCCCCceEEEEEECCCC-------------------------C-----------CEEEEEec-cccCCCCCCC
Confidence 9998877 33 3688888732110 0 00000000 0000011123
Q ss_pred eeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 223 YEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 223 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
+..... . ....|.|.+++.+|+|.|+|.+.|..
T Consensus 202 ~~~~~~-~---~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 202 FSASRS-G---NTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EEEEEE-T---TEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEEEcc-C---CEEEEEECCCCHHHCEEEEEEEecCC
Confidence 332221 1 12479999999999999999999976
No 191
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.81 E-value=1.9e-18 Score=140.07 Aligned_cols=140 Identities=18% Similarity=0.296 Sum_probs=85.5
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCC-----ceEEEEEEcC-cee---EEEeeee-eeecCcCEEEEeCCceeEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLR-----EYKVAWVKMI-TQT---ILSIHHK-VVTQNKRVSITFNDHRSWFL 89 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~-----~~~v~W~~~~-~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~L 89 (314)
..+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|++.+ +.. +...... ......|+.+... ...++|
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~-~~~~~L 92 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGS-GTDFTL 92 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEE-TTEEEE
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcC-CCEEEE
Confidence 346677778888999999999999998765 4799999864 221 1111000 0012457766542 234589
Q ss_pred EEeeecCCCCeEEEEEEecCCC--cceeEEEEEEeCCc----------------------eeeecCcceeEEecCceEEE
Q psy15734 90 HLRDVQETDRGWYMCQINTVPM--TSQKGYLQVVVPPR----------------------ILLDRTSTDVVVREGTEVTL 145 (314)
Q Consensus 90 ~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~l~v~~~p~----------------------~~~~~~~~~~~~~~g~~~~l 145 (314)
.|.+++.+|+|.|+|.+.+... ......|.|..++. +... .+....+.+|+.++|
T Consensus 93 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~-~~~~~~v~~G~~v~L 171 (268)
T 1x9q_A 93 KINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLD-ETGGGLVQPGGAMKL 171 (268)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEE-EECCEEECTTCCEEE
T ss_pred EECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEE-CCCceEecCCCcEEE
Confidence 9999999999999999976422 12334566654322 0111 123445667777777
Q ss_pred EEEecccCC--CceEEEc
Q psy15734 146 ECSAVGYPE--PYVAWRR 161 (314)
Q Consensus 146 ~C~~~~~p~--p~~~W~~ 161 (314)
.|.+.+.+. +.+.|++
T Consensus 172 ~C~~~~~~~~~~~v~W~k 189 (268)
T 1x9q_A 172 SCVTSGFTFGHYWMNWVR 189 (268)
T ss_dssp EEEEESSCGGGCEEEEEE
T ss_pred EEEecCccccccEEEEEE
Confidence 777766542 5677776
No 192
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.81 E-value=8.2e-19 Score=141.46 Aligned_cols=182 Identities=19% Similarity=0.264 Sum_probs=105.5
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEE---Eee----ee--eeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTIL---SIH----HK--VVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~---~~~----~~--~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. +..+. ... .. ......|+.+..+. ...++|.|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345678899999999999998765 5799999964 22211 110 00 01124577776542 335689999
Q ss_pred eecCCCCeEEEEEEecCCC----cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcC
Q psy15734 93 DVQETDRGWYMCQINTVPM----TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRRE 162 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~----~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~ 162 (314)
+++.+|+|.|.|.+.+... ......|.|.. +|.+.... +. ..+..|+.++|.|.+.+. |.+ .+.|++
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-p~-~~v~~g~~v~L~C~~~g~~P~~i~v~W~k- 167 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLA-PV-CGDTTGSSVTLGCLVKGYFPEPVTLTWNS- 167 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC-CC-CC--CCSEEEEEEEEEEEBSSCCEEEEGG-
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeC-CC-ccccCCCcEEEEEEEEeEeCCCCEEEEec-
Confidence 9999999999999976421 11223555543 23332221 11 123345556666655543 444 555555
Q ss_pred CCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEee
Q psy15734 163 DGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 163 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
++..+..... .... ..+.|...+.|.|.+
T Consensus 168 -------------------------------------------------~g~~~~~~~~-~~~~-~~g~~~~~s~L~i~~ 196 (261)
T 2xqy_G 168 -------------------------------------------------GSLSSGVHTF-PAVL-QSDLYTLSSSVTVTS 196 (261)
T ss_dssp -------------------------------------------------GTCCTTEEEC-CCEE-ETTEEEEEEEEEEET
T ss_pred -------------------------------------------------CCCcCceEec-Ccee-cCCcEEEEEEEEEec
Confidence 3221100000 0011 112344556999999
Q ss_pred cCCCCCeEEEEEEeeCCCCc
Q psy15734 243 ILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~ 262 (314)
+..+| |.|+|.|.|.....
T Consensus 197 ~~~~~-g~YtC~v~n~~~~~ 215 (261)
T 2xqy_G 197 STWPS-QSITCNVAHPASST 215 (261)
T ss_dssp TTTTT-SCCEEEEEEGGGTE
T ss_pred cccCC-CEEEEEEEECCCCc
Confidence 98888 99999999976543
No 193
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.81 E-value=1.4e-18 Score=142.53 Aligned_cols=136 Identities=18% Similarity=0.333 Sum_probs=87.0
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-ee---EEEee------eeeeecCcCEEEEeC-CceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMIT-QT---ILSIH------HKVVTQNKRVSITFN-DHRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~~---~~~~~------~~~~~~~~~~~~~~~-~~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+. .. +.... ........|+.+..+ ....++|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 45578999999999999998765 57899999642 11 11110 000112356665543 22346899999
Q ss_pred ecCCCCeEEEEEEecCC-C-c----ceeEEEEEEeC-----------C---ceeeecCcceeEEecCceEEEEEEecccC
Q psy15734 94 VQETDRGWYMCQINTVP-M-T----SQKGYLQVVVP-----------P---RILLDRTSTDVVVREGTEVTLECSAVGYP 153 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~-~-~----~~~~~l~v~~~-----------p---~~~~~~~~~~~~~~~g~~~~l~C~~~~~p 153 (314)
++.+|+|.|+|.+.+.. . . .....|.|..+ + .......+....+.+|++++|.|.+.+.+
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 99999999999997642 1 1 12235666551 1 11112224456788899999999888776
Q ss_pred CC------ceEEEcC
Q psy15734 154 EP------YVAWRRE 162 (314)
Q Consensus 154 ~p------~~~W~~~ 162 (314)
.+ .+.|++.
T Consensus 188 ~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQ 202 (291)
T ss_dssp EETTTTEECEEEEEE
T ss_pred ccccccceeEEEEEE
Confidence 54 8888883
No 194
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.81 E-value=6.8e-19 Score=132.64 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=75.0
Q ss_pred cceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeee----ecCcCEEEEeCCceeEEEEEeeecCCCCeEEEE
Q psy15734 29 ANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVV----TQNKRVSITFNDHRSWFLHLRDVQETDRGWYMC 104 (314)
Q Consensus 29 ~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (314)
..+.+.+|++++|.|.+.. +.+.+.|++.+. .+........ ...+|+.+.. .+++|.|.+++.+|+|.|.|
T Consensus 3 ~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~-~i~~~~~~~~~~~~~~~~R~~~~~---~~~sL~I~~v~~~DsG~Y~C 77 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKD-KVAELENSEFRAFSSFKNRVYLDT---VSGSLTIYNLTSSDEDEYEM 77 (171)
T ss_dssp EEEEEETTCCEEECCCCSS-CCSCEEEEETTE-EEEEEETTEEEECGGGTTSEEECT---TTCCEEECSCCGGGCEEEEE
T ss_pred cEEEEEcCCCEEEcCCCCC-CcceEEEEeCCc-EEEEEcCCCcccccccCCcEEEeC---CCCeEEECCCChhhCceEEE
Confidence 3578999999999999854 778999999554 3322111001 1123554421 23479999999999999999
Q ss_pred EEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEc
Q psy15734 105 QINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRR 161 (314)
Q Consensus 105 ~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~ 161 (314)
.+.+... ...+.|.|.+++..... ... .....|.|.+.+.|.|.+.|++
T Consensus 78 ~~~n~~~-~~~~~L~V~~~~~~p~i------~~~-~~~~~L~C~~~~~p~p~i~W~~ 126 (171)
T 1ccz_A 78 ESPNITD-TMKFFLYVLEMVSKPMI------YWE-CSNATLTCEVLEGTDVELKLYQ 126 (171)
T ss_dssp ECTTCCS-CEEEEEEEECCCCCCEE------EEE-TTTTEEEEECSSCSSCEEEEEE
T ss_pred EEeCCCC-cEEEEEEEECcCCCCEE------EEe-cCCcEEEEEeCCCCCcEEEEEE
Confidence 9965533 66777888765322111 000 0012566666665666666665
No 195
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.81 E-value=3.6e-19 Score=139.53 Aligned_cols=83 Identities=20% Similarity=0.307 Sum_probs=57.7
Q ss_pred cCCcceEEEcCCcEEEEEEecC--CCceEEEEEEcCc-eeEE---Eeee-----eeeecCcCEEEEeCCceeEEEEEeee
Q psy15734 26 EPVANVTATVGKEALMACVVEN--LREYKVAWVKMIT-QTIL---SIHH-----KVVTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~-~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
..+..+.+.+|++++|.|.+.+ .+.+.+.|||... .... .... ......+|+.+.. .....+|.|.++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~L~I~~v 82 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK-TSTTVDLKITSP 82 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE-CSSEEEEEESSC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe-eCCEEEEEECCC
Confidence 3456788999999999999975 3467999998532 1111 1000 0012346777766 344568999999
Q ss_pred cCCCCeEEEEEEecC
Q psy15734 95 QETDRGWYMCQINTV 109 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~ 109 (314)
+.+|+|.|.|.+.+.
T Consensus 83 ~~~D~G~Y~C~~~~~ 97 (215)
T 3nl4_H 83 TTEDTATYFCVRKYG 97 (215)
T ss_dssp CGGGCEEEEEEEECS
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999764
No 196
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=1.7e-18 Score=137.05 Aligned_cols=85 Identities=18% Similarity=0.349 Sum_probs=60.0
Q ss_pred eecCCcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-e---eEEEeeeee--e--e-cCcCEEEEeCC-ceeEEEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENL--REYKVAWVKMIT-Q---TILSIHHKV--V--T-QNKRVSITFND-HRSWFLHL 91 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~---~~~~~~~~~--~--~-~~~~~~~~~~~-~~~~~L~i 91 (314)
+...+..+.+.+|++++|.|.+.+. +...+.|||... . .+....... . . ..+|+.+..+. ...++|.|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 4556778999999999999999764 567899998642 1 122111100 0 1 34677776542 25568999
Q ss_pred eeecCCCCeEEEEEEec
Q psy15734 92 RDVQETDRGWYMCQINT 108 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~ 108 (314)
.+++.+|+|.|.|.+.+
T Consensus 84 ~~v~~~D~G~Y~C~~~~ 100 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGE 100 (230)
T ss_dssp CSCCGGGCSEEEEEECC
T ss_pred CcCChhhCEEEEEEEEC
Confidence 99999999999999965
No 197
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.80 E-value=1.2e-19 Score=142.55 Aligned_cols=183 Identities=15% Similarity=0.233 Sum_probs=100.1
Q ss_pred CCCceecCCcceE--EEcCCcEEEEEEecCC---C-ceEEEEEEcCceeEEEeeee--eeecCcCEEEEeCCceeEEEEE
Q psy15734 20 DMPRFAEPVANVT--ATVGKEALMACVVENL---R-EYKVAWVKMITQTILSIHHK--VVTQNKRVSITFNDHRSWFLHL 91 (314)
Q Consensus 20 ~~p~~~~~~~~~~--v~~g~~~~l~C~~~~~---~-~~~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i 91 (314)
.+|.+...+.... +.+|++++|.|.+.+. + .+.|.|+|++. .+...... ....++++.. ...|.|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~------~~~L~I 80 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNV-EVHTAQTQTHREDYNSTIRV------VSTLPI 80 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTE-EECCCEEEEEEETTTTEEEE------EEEEEC
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCc-cccCcccccccccCCCeEEE------EEEEEE
Confidence 4455544333333 7899999999999875 3 37999999653 32211100 0111222222 237999
Q ss_pred eeecCCCCeEEEEEEecCCCcc-eeEEE----EEEeCCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEEcCCC
Q psy15734 92 RDVQETDRGWYMCQINTVPMTS-QKGYL----QVVVPPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWRREDG 164 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~~~~~-~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~~~~~ 164 (314)
.+++.+|+|.|+|.+.+..... ....+ .+..+|.+...+.... ..+|+.+.|.|.+.| +|.+ .+.|++
T Consensus 81 ~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k--- 155 (218)
T 2rgs_A 81 QHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAE--QLSRKDVSLTCLVVGFNPGDISVEWTS--- 155 (218)
T ss_dssp CHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGG--GTTSSEEEEEEEEEEEBSSCCEEEEEE---
T ss_pred cHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChH--HhcCCceEEEEEEEeeeCCCcEEEEEE---
Confidence 9999999999999997753322 11111 2223444333221110 113555555555555 3433 555555
Q ss_pred ceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeec
Q psy15734 165 KAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSI 243 (314)
Q Consensus 165 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~ 243 (314)
++. .+............++ |...+.|.|...
T Consensus 156 -----------------------------------------------~g~-~~~~~~~~~~~~~~~gt~~~~s~l~v~~~ 187 (218)
T 2rgs_A 156 -----------------------------------------------NGH-TEENYKDTAPVLDSDGSYFIYSKLNMKTS 187 (218)
T ss_dssp -----------------------------------------------TTE-EECCEEECCCEECTTSCEEEEEEEEEEHH
T ss_pred -----------------------------------------------CCE-eccCceecccEECCCCCEEEEEEEEECHH
Confidence 322 2211111111112222 555668888888
Q ss_pred CCCCCeEEEEEEeeCCCCc
Q psy15734 244 LSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~ 262 (314)
..+|.|.|+|.|.|.....
T Consensus 188 ~~~d~g~YtC~a~n~~l~~ 206 (218)
T 2rgs_A 188 KWEKTDSFSCNVRHEGLKN 206 (218)
T ss_dssp HHHHCSCEEEEEECTTSGG
T ss_pred HcCCCCeEEEEEEcCCCCC
Confidence 7888999999999987543
No 198
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.80 E-value=1.9e-18 Score=137.53 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=59.7
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-ee---EEEeeee--ee--ecCcCEEEEeCCceeEEEEEeeec
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QT---ILSIHHK--VV--TQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~---~~~~~~~--~~--~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
+..++..+.+.+|++++|.|.+.. +.+.+.|+|.+. .. +...... .. ....|+.+..+....++|.|.+++
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 80 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELAT 80 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCC
T ss_pred cccCCCeeEEeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCC
Confidence 345677899999999999999954 578999999642 11 1111100 00 124577766543455689999999
Q ss_pred CCCCeEEEEEEecC
Q psy15734 96 ETDRGWYMCQINTV 109 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~ 109 (314)
.+|+|.|.|.+.+.
T Consensus 81 ~~D~G~Y~C~~~~~ 94 (238)
T 1bec_A 81 PSQTSVYFCASGGG 94 (238)
T ss_dssp GGGCEEEEEEEESC
T ss_pred cccCEEEEEEEecC
Confidence 99999999999764
No 199
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.80 E-value=1.7e-19 Score=140.57 Aligned_cols=178 Identities=14% Similarity=0.208 Sum_probs=100.9
Q ss_pred eecCCcceE-EEcCCcEEEEEEecCCC----ceEEEEEEcCceeEEEeeee--eeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 24 FAEPVANVT-ATVGKEALMACVVENLR----EYKVAWVKMITQTILSIHHK--VVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 24 ~~~~~~~~~-v~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
++.+|.... +.+|++++|.|.+.+.+ ...+.|+|++. .+...... ....++++.. ...|.|.+++.
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~------~~~L~I~~~~~ 77 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDV-EVHTAQTKPREEQFNSTFRS------VSELPIMHQDW 77 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTE-EECCCEEECCCEETTTEEEE------EEEEECCHHHH
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCc-cccccccCCCcCcCCCcEEE------EEEEEEehhHc
Confidence 344555444 88999999999998763 35999999663 33211000 0011122211 23799999999
Q ss_pred CCCeEEEEEEecCCCc-ceeEEE----EEEeCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCceeec
Q psy15734 97 TDRGWYMCQINTVPMT-SQKGYL----QVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKAINY 169 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~-~~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~~~~ 169 (314)
+|+|.|+|.+.+.... .....+ .+..+|.+...+.... ...|+.+.|.|.+.|. |. +.+.|++ ++..
T Consensus 78 ~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~--~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~--- 151 (207)
T 2vol_A 78 LNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKE--QMAKDKVSLTCMITDFFPEDITVEWES-NGQP--- 151 (207)
T ss_dssp HTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTG--GGSSSEEEEEEEEEEEBSSCCEEEEEE-TTEE---
T ss_pred CCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHH--HhcCCceEEEEEEeeEECCCCEEEEEE-CCEe---
Confidence 9999999999765332 121222 2334454433321111 1235666666666653 33 2566665 3322
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeC-CeeeEEEEEEeecCCCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLIN-GYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~s~L~i~~~~~~d~ 248 (314)
+............+ .|...+.|.|.....+|.
T Consensus 152 -----------------------------------------------l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~ 184 (207)
T 2vol_A 152 -----------------------------------------------AENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAG 184 (207)
T ss_dssp -----------------------------------------------CSCEEECCCEECTTSCEEEEEEEEEEHHHHSSC
T ss_pred -----------------------------------------------ccCcccCCceECCCCCEEEEEEEEECHHHcCCC
Confidence 11100011111222 255566889988888899
Q ss_pred eEEEEEEeeCCCC
Q psy15734 249 GSYRCVAVNALGE 261 (314)
Q Consensus 249 G~Y~C~a~n~~g~ 261 (314)
|.|+|.|.|....
T Consensus 185 g~ytC~a~n~~l~ 197 (207)
T 2vol_A 185 NTFTCSVLHEGLH 197 (207)
T ss_dssp CEEEEEEECTTSG
T ss_pred CEEEEEEECCCCC
Confidence 9999999998654
No 200
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.80 E-value=5.1e-19 Score=142.18 Aligned_cols=83 Identities=14% Similarity=0.367 Sum_probs=57.9
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeE---EEeee----ee--eecCcCEEEEeCC-ceeEEEEEee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTI---LSIHH----KV--VTQNKRVSITFND-HRSWFLHLRD 93 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~---~~~~~----~~--~~~~~~~~~~~~~-~~~~~L~i~~ 93 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.. +..+ ..... .. ....+|+.+..+. ...++|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (257)
T 3bn9_D 6 QSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSS 85 (257)
T ss_dssp EECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEES
T ss_pred ccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECC
Confidence 34567899999999999998754 5789999964 2211 11100 00 1124677776542 3456899999
Q ss_pred ecCCCCeEEEEEEecC
Q psy15734 94 VQETDRGWYMCQINTV 109 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~ 109 (314)
++.+|+|.|.|.+.+.
T Consensus 86 v~~~DsG~Y~C~~~~~ 101 (257)
T 3bn9_D 86 LRAEDTAVYYCARPYL 101 (257)
T ss_dssp CCGGGCEEEEEEEECC
T ss_pred CChhhCEEEEEEEecC
Confidence 9999999999999764
No 201
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.79 E-value=2.3e-18 Score=134.90 Aligned_cols=133 Identities=22% Similarity=0.353 Sum_probs=77.0
Q ss_pred CCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-cee---EEEeee---eee--ecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 27 PVANVTATVGKEALMACVVENLR--EYKVAWVKMI-TQT---ILSIHH---KVV--TQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~---~~~~~~---~~~--~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
.+..+.+.+|++++|.|.+.+.+ .+.+.|+|.+ +.. +..... ... ...+|+.+..+. ...++|.|.++
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSL 85 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSC
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCC
Confidence 35567899999999999998753 5789999964 211 111100 000 123577766532 23568999999
Q ss_pred cCCCCeEEEEEEecCC----CcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEc
Q psy15734 95 QETDRGWYMCQINTVP----MTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRR 161 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~----~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~ 161 (314)
+.+|+|.|.|.+.+.. .......|.|.. +|.+.... + ...+..|+.+.|.|.+.+. |.| .+.|++
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~-~-~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 160 (215)
T 1c5d_H 86 QTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLA-P-GCGDTTSSTVTLGCLVKGYFPEPVTVTWNS 160 (215)
T ss_dssp CGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEEC-C-CSSCCCCSSEEEEEEEEEEBSSCCEEEEGG
T ss_pred CcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEecc-C-ChhhccCCcEEEEEEEeeeEcCCcEEEEcc
Confidence 9999999999996542 112234566552 23332221 0 1112345555555555543 444 555554
No 202
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.79 E-value=1.9e-18 Score=139.33 Aligned_cols=162 Identities=16% Similarity=0.157 Sum_probs=115.8
Q ss_pred cceeEEecCceEEEEEEecccCCC-ceEEEcCCCceeecCCeeC-------------------------------CCeEE
Q psy15734 132 STDVVVREGTEVTLECSAVGYPEP-YVAWRREDGKAINYNGELV-------------------------------PPMLT 179 (314)
Q Consensus 132 ~~~~~~~~g~~~~l~C~~~~~p~p-~~~W~~~~~~~~~~~~~~~-------------------------------~p~~~ 179 (314)
+....+.+|+.+.|.|.+.+.|.+ .+.|++ ++..+....... .+.+.
T Consensus 8 p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~ 86 (262)
T 3rjd_A 8 PPWVSVFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLL 86 (262)
T ss_dssp SCCSEEETTCCEEEEEECSSCCCTTCEEEEE-TTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSSEE
T ss_pred CCcEEeeCCCeEEEEEECCCCCCCceEEEEE-CCEEeeccCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccceE
Confidence 355678899999999999998888 999999 676654322111 22223
Q ss_pred cCCCcceeecCccEEEEEEE-eecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeC
Q psy15734 180 IPNQLEGAFVSQTVELHCHT-EAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNA 258 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~-~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 258 (314)
..+....+.+|+.+.|.|.+ .+.|.+.+.|++++...... ..+ ..|.|.+++.+|+|.|+|.|.|.
T Consensus 87 ~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~-----~~l~i~~~~~~d~G~Y~C~~~n~ 153 (262)
T 3rjd_A 87 LQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWN-----SNLTILKTNISHNGTYHCSGMGK 153 (262)
T ss_dssp EEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EEC-----CCEEESSCCGGGCEEEEEEEESS
T ss_pred ecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCC-----CeEEEEECChhhCEEEEEEEeCC
Confidence 33445567899999999999 77888999999974433211 112 28999999999999999999999
Q ss_pred CCCceeEEEEEEEecC-CCeeEEEE---ccccccEeEEEEEeeccC-CCccceE
Q psy15734 259 LGETDGFIKVYVNLVD-GDIFQIRK---MSRLHMGAYLCIASNGVV-PSVSHRI 307 (314)
Q Consensus 259 ~g~~~~~~~l~V~~~~-~~~~~~~~---~~~~~~g~~~C~a~~~~~-~~~~w~v 307 (314)
.+.....+.|.|.... .+.+.... +..++...++|.+.+.|. |.+.|.+
T Consensus 154 ~~~~~~~~~l~V~~~~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~ 207 (262)
T 3rjd_A 154 HRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYF 207 (262)
T ss_dssp SEEEEECEEEEEECSSCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEE
T ss_pred CCccccceEEEeccCCCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEE
Confidence 9888888888888763 34444332 234455579999999987 7777765
No 203
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=5.1e-19 Score=122.16 Aligned_cols=95 Identities=21% Similarity=0.240 Sum_probs=79.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++.+....+ .++|.|.++..+|+|.|+|.
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADGA----EHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEETT----EEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEEC-cccccceeeEEEeecCc----eEEEEEecCChhhCEEEEEE
Confidence 78888888889999999999999999999999999997 55555556665543322 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecC
Q psy15734 255 AVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~ 274 (314)
|.|..|....++.|.|..+|
T Consensus 88 a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 88 ARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEETTEEEEEEEEEEEEC--
T ss_pred EEECCCEEEEEEEEEEEcCC
Confidence 99999999999999987653
No 204
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.79 E-value=2.1e-18 Score=138.64 Aligned_cols=183 Identities=15% Similarity=0.258 Sum_probs=105.5
Q ss_pred ecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-ee---EEEeeee----eeecCc-CEEEEeCCceeEEEEEeeec
Q psy15734 25 AEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QT---ILSIHHK----VVTQNK-RVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 25 ~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~---~~~~~~~----~~~~~~-~~~~~~~~~~~~~L~i~~~~ 95 (314)
..++..+.+.+|++++|.|.+.+.+.+.+.|||... .. +...... .....+ |+.+..+.... |.|.+++
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~--L~I~~v~ 82 (253)
T 3to4_D 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE--LRLQVAN 82 (253)
T ss_dssp EEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC--CEEEEES
T ss_pred EeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe--EEEccCC
Confidence 445778899999999999999887888999998421 11 1111100 001112 66665544333 9999999
Q ss_pred CCCCeEEEEEEecCCC-------cceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEecc-cCCC-ceEEE
Q psy15734 96 ETDRGWYMCQINTVPM-------TSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVG-YPEP-YVAWR 160 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~-------~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p-~~~W~ 160 (314)
.+|+|.|+|.+.+... ......|.|.. +|.+.... +....+..|+.+.|.|.+.+ +|.+ .+.|+
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~ 161 (253)
T 3to4_D 83 MSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWW 161 (253)
T ss_dssp CSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEE-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeC-CChhhcccCCceEEEEEEceEECCcEEEEEE
Confidence 9999999999964321 11122455542 23332211 11111223456666666665 3444 56666
Q ss_pred cCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-------eeCCee
Q psy15734 161 REDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-------LINGYS 233 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-------~~~~~~ 233 (314)
+ ++..+. ......... .++.|.
T Consensus 162 k-~g~~l~--------------------------------------------------~~~~~~~~~~~~~~~~~~g~~~ 190 (253)
T 3to4_D 162 V-NGKEVH--------------------------------------------------SGVSTDPQPLKEQPALNDSRYA 190 (253)
T ss_dssp E-TTEEEC--------------------------------------------------TTEEECSSCEESSTTCTTCCEE
T ss_pred E-CCEECC--------------------------------------------------CceecccccccccccCCCCCEE
Confidence 6 433321 110000000 122255
Q ss_pred eEEEEEEeecCCCC-CeEEEEEEeeCCCC
Q psy15734 234 CHMTLKIRSILSHQ-FGSYRCVAVNALGE 261 (314)
Q Consensus 234 ~~s~L~i~~~~~~d-~G~Y~C~a~n~~g~ 261 (314)
..+.|.|.....+| .|.|+|.|.|..-.
T Consensus 191 ~~s~l~i~~~~~~d~~~~ytC~v~h~~l~ 219 (253)
T 3to4_D 191 LSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (253)
T ss_dssp EEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEEEECHHHhccCCCEEEEEEEeCCCC
Confidence 56789999998888 77999999997543
No 205
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.79 E-value=1.4e-18 Score=137.77 Aligned_cols=189 Identities=13% Similarity=0.166 Sum_probs=104.6
Q ss_pred CcceEEEcCCcEEEEEEecCC----CceEEEEEEcCc-e---eEEEee--ee----e--eecCcCEEEEeCC-ceeEEEE
Q psy15734 28 VANVTATVGKEALMACVVENL----REYKVAWVKMIT-Q---TILSIH--HK----V--VTQNKRVSITFND-HRSWFLH 90 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~----~~~~v~W~~~~~-~---~~~~~~--~~----~--~~~~~~~~~~~~~-~~~~~L~ 90 (314)
+..+.+.+|++++|.|.+.+. ....|.|||... . .+.... .. . ....+|+.+..+. ...++|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 445779999999999999653 234559998532 1 111110 00 0 1123577776543 3556899
Q ss_pred EeeecCCCCeEEEEEEecCC---------CcceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEecccCC--C
Q psy15734 91 LRDVQETDRGWYMCQINTVP---------MTSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGYPE--P 155 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~~---------~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~--p 155 (314)
|.+++.+|+|.|.|.+.+.. .......|.|.. +|.+.... ....+..|+.+.|.|.+.+.++ .
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~~~~P~~~ 164 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPV 164 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEEC--C-------CEEEEEEEEEEEBSSCC
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEec--ccccccCCCcEEEEEEEeeEeCCCe
Confidence 99999999999999997542 111223444431 23332211 1122334556666666555322 1
Q ss_pred ceEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeE
Q psy15734 156 YVAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCH 235 (314)
Q Consensus 156 ~~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (314)
.+.|++ ++......... .....++.|...
T Consensus 165 ~v~W~~--------------------------------------------------~g~~~~~~~~~-~~~~~~g~~~~~ 193 (232)
T 3qhz_H 165 TVSWNS--------------------------------------------------GALTSGVHTFP-AVLQSSGLYSLS 193 (232)
T ss_dssp EEEEGG--------------------------------------------------GTBCTTEEECC-CEECTTSCEEEE
T ss_pred EEEEEE--------------------------------------------------CCEecceeecc-ceeCCCCCEEEE
Confidence 344555 22110000000 001112235556
Q ss_pred EEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 236 MTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 236 s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
+.|.|.+....| |.|+|.|.|..+.......|.+
T Consensus 194 s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 194 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp EEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 799999999999 9999999999877666655543
No 206
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.79 E-value=5.4e-18 Score=128.74 Aligned_cols=122 Identities=11% Similarity=0.124 Sum_probs=74.8
Q ss_pred CcceEEEcCCcEEEEEEec--CCCceEEEEEE--cCceeEEEeee--eeeecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 28 VANVTATVGKEALMACVVE--NLREYKVAWVK--MITQTILSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~--~~~~~~v~W~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
...+.+.+|++++|.|... +.+.+.+.|++ ++. .+..... .....+.|+.+..+ ++|.|.+++++|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~-~i~~~~~~~~~~~~~~R~~~~~n----gsL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKK-KIAQFRKEKETFKEKDTYKLFKN----GTLKIKHLKTDDQDI 80 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCC-EEEEECGGGCEEESCTTEEECTT----SCEEECSCCGGGCEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCc-EEEEEeCccCCCCCCCeEEECCC----CCEEECCCChhhCEE
Confidence 5678899999999999542 24568999999 543 2321110 01123567766543 379999999999999
Q ss_pred EEEEEecCCCc---ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEc
Q psy15734 102 YMCQINTVPMT---SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRR 161 (314)
Q Consensus 102 Y~C~~~~~~~~---~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~ 161 (314)
|+|.+.+.... ...+.|.|..+.... .... .+..+.|.|.+.+.|.|.+.|++
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P------~i~~-~~~~v~L~C~~~~~p~~~~~W~~ 136 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQERVSKP------KISW-TCINTTLTCEVMNGTDPELNLYQ 136 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECCCCCC------EEEE-ETTTTEEEEECSSCSSCEEEEEE
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCcCCCC------EEEE-ccCcEEEEeEccCCCCCEEEEEE
Confidence 99999765322 234566766532110 1111 22345666666665555666665
No 207
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.78 E-value=1.8e-18 Score=138.94 Aligned_cols=189 Identities=16% Similarity=0.275 Sum_probs=109.5
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-ee---EEEeeee-e-e--ecCcCEEEEeCCceeEEEEEee
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-QT---ILSIHHK-V-V--TQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~~---~~~~~~~-~-~--~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
+.+..++..+.+.+|++++|.|.+.. +.+.+.|++... .. +...... . . ....|+.+.......++|.|.+
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 82 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTS 82 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECS
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECc
Confidence 44566788899999999999999954 568999999642 11 1111000 0 0 1235777654333445899999
Q ss_pred ecCCCCeEEEEEEecCC----CcceeEEEEEEe------CCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEc
Q psy15734 94 VQETDRGWYMCQINTVP----MTSQKGYLQVVV------PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRR 161 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~----~~~~~~~l~v~~------~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~ 161 (314)
++.+|+|.|.|.+.+.. .......|.|.. +|.+.... +....+..|+.+.|.|.+.+. |.+ .+.|++
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~ 161 (252)
T 1oga_E 83 AQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFE-PSEAEISHTQKATLVCLATGFYPDHVELSWWV 161 (252)
T ss_dssp CCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEEC-CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEEC-CChhhhccCCceEEEEEEeeEcCCCcEEEEEE
Confidence 99999999999997641 111223455543 33332221 111122345666666666653 432 566665
Q ss_pred CCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee------ee-EeeCCeee
Q psy15734 162 EDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE------DS-RLINGYSC 234 (314)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~------~~-~~~~~~~~ 234 (314)
++..+ ....... .. ..++.|..
T Consensus 162 -~g~~l--------------------------------------------------~~~~~~~~~~~~~~~~~~~gt~~~ 190 (252)
T 1oga_E 162 -NGKEV--------------------------------------------------HSGVSTDPQPLKEQPALNDSRYSL 190 (252)
T ss_dssp -TTEEE--------------------------------------------------CSSEEECSSCEESCTTSTTCCEEE
T ss_pred -CCEEC--------------------------------------------------CCCcccccccccccccCCCCCEEE
Confidence 33322 1110000 00 01222555
Q ss_pred EEEEEEeecCCC-CCeEEEEEEeeCCCCce
Q psy15734 235 HMTLKIRSILSH-QFGSYRCVAVNALGETD 263 (314)
Q Consensus 235 ~s~L~i~~~~~~-d~G~Y~C~a~n~~g~~~ 263 (314)
.+.|.|...... |.|.|+|.|.|......
T Consensus 191 ~s~L~i~~~~~~d~~~~ytC~v~~~~l~~~ 220 (252)
T 1oga_E 191 SSRLRVSATFWQNPRNHFRCQVQFYGLSEN 220 (252)
T ss_dssp EEEEEEEHHHHTCTTCEEEEEEEECCBCTT
T ss_pred EEEEEECHHHhccCCCEEEEEEEcCCCCCC
Confidence 678999887765 57899999999876554
No 208
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=142.56 Aligned_cols=176 Identities=20% Similarity=0.240 Sum_probs=120.3
Q ss_pred CCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCe-----------eC-----------------
Q psy15734 123 PPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGE-----------LV----------------- 174 (314)
Q Consensus 123 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~-----------~~----------------- 174 (314)
+|.+... +....+.+|+.+.|.|.+.+.|. .+.|++.++..+..... +.
T Consensus 4 ~p~v~~~--~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 4 LLQVTIS--LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp CCEEEES--CSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CceEEEe--ccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence 3444443 35678899999999999998774 89999865554432211 00
Q ss_pred -----------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEE
Q psy15734 175 -----------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 175 -----------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 237 (314)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|++++..... ....+.....++ .
T Consensus 81 n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~-----~ 154 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT-ISDNRFAMLANN-----N 154 (291)
T ss_dssp CSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CB-CCCSSEEECTTS-----C
T ss_pred cccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccc-cCCceEEEccCC-----C
Confidence 34444445566789999999999999999999999997544332 122222223344 8
Q ss_pred EEEeecCCCCCeEEEEEEeeCCCCce--eEEEEEEEecCCCeeE----EEEccccccEeEEEEEeeccCCCccceE
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALGETD--GFIKVYVNLVDGDIFQ----IRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~~~----~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|.++..+|+|.|+|.|.|..+... ..+.+.|..+|..... ...+..++...+.|.+.+.|.|.+.|..
T Consensus 155 L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 230 (291)
T 2wim_A 155 LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 230 (291)
T ss_dssp EEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEE
T ss_pred EEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEE
Confidence 99999999999999999999886543 4556666655432211 1123345556799999999999999964
No 209
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.78 E-value=2.2e-18 Score=137.24 Aligned_cols=83 Identities=16% Similarity=0.275 Sum_probs=56.6
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC----ceEEEEEEcCc-e---eEEEee------e-----eeeecCcCEEEEeCC-ce
Q psy15734 26 EPVANVTATVGKEALMACVVENLR----EYKVAWVKMIT-Q---TILSIH------H-----KVVTQNKRVSITFND-HR 85 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~----~~~v~W~~~~~-~---~~~~~~------~-----~~~~~~~~~~~~~~~-~~ 85 (314)
.++..+.+.+|++++|.|.+.+.+ ...+.||+... . .+.... . ......+|+.+..+. ..
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 84 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKN 84 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGT
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCC
Confidence 345578899999999999997644 45899999532 1 111111 0 000123577776542 34
Q ss_pred eEEEEEeeecCCCCeEEEEEEec
Q psy15734 86 SWFLHLRDVQETDRGWYMCQINT 108 (314)
Q Consensus 86 ~~~L~i~~~~~~d~G~Y~C~~~~ 108 (314)
.++|.|.+++.+|+|.|.|.+.+
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~~ 107 (239)
T 3tv3_H 85 LVFLKLNSVTAADTATYYCARFG 107 (239)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEEECCCChhhCEEEEEEEec
Confidence 56899999999999999999854
No 210
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.78 E-value=1.3e-16 Score=141.13 Aligned_cols=226 Identities=16% Similarity=0.193 Sum_probs=129.9
Q ss_pred cCCcEEEEEEecCC-Cc-eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEecCCCc
Q psy15734 35 VGKEALMACVVENL-RE-YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQINTVPMT 112 (314)
Q Consensus 35 ~g~~~~l~C~~~~~-~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 112 (314)
.|+.+.|.|.+.+. |. ..+.|++++..............++.+.+. ..|.|.+.... .|.|+|.+.+....
T Consensus 149 ~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~------s~L~i~~~~~~-~g~ytC~v~n~~~~ 221 (512)
T 1zvo_C 149 DNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTS------SQLSTPLQQWR-QGEYKCVVQHTASK 221 (512)
T ss_pred CCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEE------EEEEEcHHHcC-CceEEEEEEeCCCC
Confidence 46899999999885 54 489999954221111011111112333332 26888888777 89999999775322
Q ss_pred -ceeE-----------EEEEEeCCc----------------------------------------------------eee
Q psy15734 113 -SQKG-----------YLQVVVPPR----------------------------------------------------ILL 128 (314)
Q Consensus 113 -~~~~-----------~l~v~~~p~----------------------------------------------------~~~ 128 (314)
.... .+.+..+|. +..
T Consensus 222 ~~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~ 301 (512)
T 1zvo_C 222 SKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYL 301 (512)
T ss_pred ceEEEecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEE
Confidence 2222 233433332 222
Q ss_pred ecCcceeEEecCceEEEEEEecccCC--CceEEEcCCCceee-----------cCCeeC---------------------
Q psy15734 129 DRTSTDVVVREGTEVTLECSAVGYPE--PYVAWRREDGKAIN-----------YNGELV--------------------- 174 (314)
Q Consensus 129 ~~~~~~~~~~~g~~~~l~C~~~~~p~--p~~~W~~~~~~~~~-----------~~~~~~--------------------- 174 (314)
.+ +....+..|+.+.|.|.+.+.++ ..+.|++ ++..+. .++...
T Consensus 302 ~~-p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~ 379 (512)
T 1zvo_C 302 LT-PAVQDLWLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCT 379 (512)
T ss_pred EC-CChHHhccCCceEEEEEEeceECCCeEEEEEE-CCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEE
Confidence 21 22233557999999999998633 3899999 554432 011100
Q ss_pred -------CC--eEEcC-------CCcceee----cCccEE-EEEEEeecCCc--eeEEecCCCeeeecCCce--eeeEee
Q psy15734 175 -------PP--MLTIP-------NQLEGAF----VSQTVE-LHCHTEAFPAS--LNYWTNEKGDMIITGDDY--EDSRLI 229 (314)
Q Consensus 175 -------~p--~~~~~-------~~~~~v~----~g~~~~-l~C~~~g~p~p--~~~W~~~~~~~~~~~~~~--~~~~~~ 229 (314)
.+ .+... +..+.+. .|+.+. |.|.+.|++++ .+.|++++. .+...... ......
T Consensus 380 a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~~~L~C~~~g~~P~~i~v~W~k~g~-~~~~~~~~~~~~~~~~ 458 (512)
T 1zvo_C 380 LNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQR-EVNTSGFAPARPPPQP 458 (512)
T ss_pred EEeCCCCCCceeEEeecCCCCCCCCEEEEEccCcCCCCceEEEEEEeeeCCCCcEEEEEECCe-ECcCccccccceeECC
Confidence 11 01110 0111111 588899 99999996554 578999744 33222111 111222
Q ss_pred CC--eeeEEEEEEeecCCCCCeEEEEEEeeCCCCcee--EEEEEE
Q psy15734 230 NG--YSCHMTLKIRSILSHQFGSYRCVAVNALGETDG--FIKVYV 270 (314)
Q Consensus 230 ~~--~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V 270 (314)
++ |...+.|.|.....+|.|.|+|.|.|....... ...|.|
T Consensus 459 dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v 503 (512)
T 1zvo_C 459 GSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEV 503 (512)
T ss_pred CCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEe
Confidence 33 666678999988888999999999998765443 344444
No 211
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.77 E-value=1.7e-18 Score=118.02 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=76.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+.+..+.+|+++.|.|.+.|.|.|.+.|+++ +..+......++.....+ ..++|.|.++..+|+|.|+|.
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTD--DLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECS--SEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC-ceEeeeeccceeeeeccc--ceEEEEEcCCCccCCEEEEEE
Confidence 67888888889999999999999999999999999997 444433333222222222 134899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEe
Q psy15734 255 AVNALGETDGFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~ 272 (314)
|.|..|..+.++.|.|+.
T Consensus 82 a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCEEEEEEEEEEEE
Confidence 999999999999998864
No 212
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.77 E-value=1.1e-17 Score=132.35 Aligned_cols=189 Identities=17% Similarity=0.240 Sum_probs=108.4
Q ss_pred CcceEEEcCCcEEEEEEecC--CCceEEEEEEcCc-e---eEEEeee------eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 28 VANVTATVGKEALMACVVEN--LREYKVAWVKMIT-Q---TILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~-~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
+..+.+.+|++++|.|.+.+ .....+.|||... . .+..... ......+|+.+..+. ...++|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34688999999999999965 2457899998532 1 1111110 011124678776544 35668999999
Q ss_pred cCCCCeEEEEEEecCCC---------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-C-CCceEE
Q psy15734 95 QETDRGWYMCQINTVPM---------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-P-EPYVAW 159 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~---------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~~~W 159 (314)
+.+|+|.|.|.+.+... ......|.|.. +|.+.... ....+..|+.+.|.|.+.+. | .+.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVTVSW 164 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEC--CCCCCCTTCEEEEEEEEEEEBSSCCEEEE
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecC--CCccccCCCCEEEEEEEEeEECCCEEEEE
Confidence 99999999999965321 11222344431 22222211 11122355556666655543 2 223555
Q ss_pred EcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEE
Q psy15734 160 RREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTL 238 (314)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L 238 (314)
. + ............... ++.|...+.|
T Consensus 165 -~--~-------------------------------------------------~~~~~~~~~~~~~~~~~g~~~~~s~L 192 (230)
T 3n9g_H 165 -N--S-------------------------------------------------GALTSGVHTFPAVLQSSGLYSLSSVV 192 (230)
T ss_dssp -G--G-------------------------------------------------GTBCTTEEECCCEECTTSCEEEEEEE
T ss_pred -C--C-------------------------------------------------cccCCCeEeCCceECCCCCEEEEEEE
Confidence 2 1 111000000000111 2235666799
Q ss_pred EEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 239 KIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 239 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.|.....+| |.|+|.|.|..+.......|.|.
T Consensus 193 ~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 193 TVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred EECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 999999999 99999999988776666655544
No 213
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.77 E-value=5e-18 Score=135.83 Aligned_cols=219 Identities=14% Similarity=0.111 Sum_probs=109.4
Q ss_pred cCCcceEEEcCCcEEEEEEecC--CCceEEEEEEcCc-eeEE---Eeee------eeeecCcCEEEEeCC-ceeEEEEEe
Q psy15734 26 EPVANVTATVGKEALMACVVEN--LREYKVAWVKMIT-QTIL---SIHH------KVVTQNKRVSITFND-HRSWFLHLR 92 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~-~~~~---~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~ 92 (314)
..+..+.+.+|++++|.|.+.+ .+...+.|||... ..+. .... ......+|+.+..+. ....+|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 4566788999999999999975 2457899998542 1111 1000 001124677776543 345689999
Q ss_pred eecCCCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCe
Q psy15734 93 DVQETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGE 172 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~ 172 (314)
+++.+|+|.|.|.+.+....... -............ .......|....|.........|.+.-...
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~---------- 149 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRN-GYNYYDFYDGYYN---YHYMDVWGKGTTVTVSSASTKGPSVFPLAP---------- 149 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEET-TEEEECGGGCCEE---EEEEEEECCCEEEEECSCCCBCCEEEEECC----------
T ss_pred CCCHHHCEEEEEEEeCCCCcccc-ccccccccccccc---cccceeeCCCEEEEEcccCCCCCEEEEeCC----------
Confidence 99999999999998642100000 0000000000000 000001112222222211112222222210
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeec-C-CceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeE
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAF-P-ASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~-p-~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 250 (314)
...+..|+.+.|.|.+.+. | +..+.|++++......... .....++.|...+.|.|......| |.
T Consensus 150 -----------~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~-~~~~~~g~~~~~s~L~i~~~~~~~-~~ 216 (248)
T 3u2s_H 150 -----------SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP-AVLQSSGLYSLSSVVTVPSSSLGT-QT 216 (248)
T ss_dssp -----------C------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC-CEECTTSCEEEEEEEEEEGGGBTT-BC
T ss_pred -----------CccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecC-ceECCCCCEEEEEEEEEChhhcCC-Ce
Confidence 0112345666666666553 3 2345566643211111000 011112236667799999998888 99
Q ss_pred EEEEEeeCCCCceeEEEEEEE
Q psy15734 251 YRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 251 Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
|+|.|.|..+.......|.+.
T Consensus 217 ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 217 YICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp CEEEEEEGGGTEEEEEECCC-
T ss_pred EEEEEEECCCCcceEEEEccC
Confidence 999999988766655555443
No 214
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.76 E-value=6.3e-17 Score=124.45 Aligned_cols=120 Identities=18% Similarity=0.224 Sum_probs=87.2
Q ss_pred CCcc-eEEEcCCcEEEEEEecCCCce--EEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEE
Q psy15734 27 PVAN-VTATVGKEALMACVVENLREY--KVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYM 103 (314)
Q Consensus 27 ~~~~-~~v~~g~~~~l~C~~~~~~~~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 103 (314)
++.. +.|..|+++.|.|.+ +.+.+ .|.|++.+... ++.... .....|.|.+++.+|+|.|.
T Consensus 12 pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l------------~~~~~~---~~~~~L~I~~v~~~d~G~Y~ 75 (210)
T 1gsm_A 12 PPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL------------GAVQSD---TGRSVLTVRNASLSAAGTRV 75 (210)
T ss_dssp SCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT------------CCEEEE---SSEEEEEECSCCGGGCEEEE
T ss_pred CCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc------------CcEEec---CCccEEEECccCcccCceEE
Confidence 4443 799999999999999 77767 99999854321 122111 12237999999999999999
Q ss_pred EEEecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CC----CceEEEcCCCcee
Q psy15734 104 CQINTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE----PYVAWRREDGKAI 167 (314)
Q Consensus 104 C~~~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~----p~~~W~~~~~~~~ 167 (314)
|.+.+.+ .....+.|.|+.+|...... +. ....|+.+ |.|.+.+. |. +.+.|++ ++.++
T Consensus 76 C~a~n~~~~~~~~~~ltV~~~P~~~~i~-~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk-~~~~L 140 (210)
T 1gsm_A 76 CVGSCGGRTFQHTVQLLVYAFPNQLTVS-PA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLV-GGQEL 140 (210)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCSEEEEE-SS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE-TTEEC
T ss_pred EEEEeCCCceEEEEEEEEEecCCCcEEc-cc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEE-CCEEc
Confidence 9997764 33557889999999876543 22 45677778 99999875 64 3799998 55544
No 215
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.76 E-value=3.3e-17 Score=128.30 Aligned_cols=187 Identities=16% Similarity=0.144 Sum_probs=117.5
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.| ..+..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+.. ....++.+...+. ...|.|.+++.+|
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g-~~l~~------~~~~~~~~~~~~~-~~~L~i~~~~~~d 87 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDG-QLLPS------SNYSNIKIYNTPS-ASYLEVTPDSEND 87 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETT-EESSC------SSSCSEEEEEETT-EEEEEECCCSGGG
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECC-eECCC------CCCccEEEecCCC-eeEEEEecCChhh
Confidence 346677 4566689999999999999999888999999954 33211 1123455543322 3489999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc----CCC--ceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY----PEP--YVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~----p~p--~~~W~~~~~~~~~~~~ 171 (314)
+|.|+|.+.|. +.....+.|.|..+|...... .....+..+.|.|..... |.. .+.|.+
T Consensus 88 ~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~----~~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~---------- 153 (215)
T 3mtr_A 88 FGNYNCTAVNRIGQESLEFILVQADTPSSPSID----QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRA---------- 153 (215)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECCCCCCCEEE----EEEEETTEEEEEEECCSCCCSSCEEEEEEEEEE----------
T ss_pred CeEEEEEEEECCCceEEEEEEEECCCCCCCcce----EEEEecceEEEEEecCCccCCCceEEEEEEEEE----------
Confidence 99999999775 445566677777666543221 112335566776653221 111 233443
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE-eeCCeeeEEEEEEeecCCCCCeE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR-LINGYSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~-~~~~~~~~s~L~i~~~~~~d~G~ 250 (314)
++...... ....... .... .|.|.++...|.|.
T Consensus 154 ----------------------------------------~~~~~w~~-~~~~~~~~~~~~-----~l~i~~L~~~~~y~ 187 (215)
T 3mtr_A 154 ----------------------------------------VGEEVWHS-KWYDAKEASMEG-----IVTIVGLKPETTYA 187 (215)
T ss_dssp ----------------------------------------TTCCCCEE-EEEEHHHHHHHT-----EEEEECCCTTCEEE
T ss_pred ----------------------------------------CCCCcccc-cccccccccccc-----cEEECCCCCCCEEE
Confidence 21110000 0000000 0012 89999999999999
Q ss_pred EEEEEeeCCCCceeEEEEEEEecC
Q psy15734 251 YRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 251 Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
|+|.|.|..|....+..+.+..++
T Consensus 188 ~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 188 VRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp EEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEeCCcccCcccceeeEecc
Confidence 999999999988766666665543
No 216
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.75 E-value=5.1e-17 Score=126.88 Aligned_cols=95 Identities=20% Similarity=0.307 Sum_probs=76.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCC-CCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILS-HQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C 253 (314)
||.|...+....+.+|+++.|.|.+.|.|.+.+.|++++..+.....++.+....++ .+.|.|.++.. +|+|.|+|
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG---ISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTT---EEEEEESSCCTTTTCSEEEE
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCC---eEEEEEEecCCCCcCceEEE
Confidence 788888888899999999999999999999999999975443324455554433333 25899999999 99999999
Q ss_pred EEeeCCCC-ceeEEEEEEEe
Q psy15734 254 VAVNALGE-TDGFIKVYVNL 272 (314)
Q Consensus 254 ~a~n~~g~-~~~~~~l~V~~ 272 (314)
.|.|..|. ....+.|.|..
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~ 102 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYE 102 (212)
T ss_dssp EEECSSSCEEEEEEEEEEEC
T ss_pred EEEeCCCCeEEeeEEEEEec
Confidence 99999998 67777887754
No 217
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.75 E-value=1.2e-17 Score=139.49 Aligned_cols=165 Identities=16% Similarity=0.200 Sum_probs=113.2
Q ss_pred ceeEEecCceEEEEEEeccc---------CCCceEEEcCCCceeec-------------------CC-eeC---------
Q psy15734 133 TDVVVREGTEVTLECSAVGY---------PEPYVAWRREDGKAINY-------------------NG-ELV--------- 174 (314)
Q Consensus 133 ~~~~~~~g~~~~l~C~~~~~---------p~p~~~W~~~~~~~~~~-------------------~~-~~~--------- 174 (314)
....+.+|+.+.|.|.+.+. |.+.+.|++ ++..+.. .| .+.
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~ 115 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEK-IGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGD 115 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEE-CSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEE-CCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCc
Confidence 45568899999999999884 557899999 4432211 11 111
Q ss_pred ------------CCeEEcCCCcceeecCccEEEEEEEeecC-CceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEe
Q psy15734 175 ------------PPMLTIPNQLEGAFVSQTVELHCHTEAFP-ASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 175 ------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+|.+..+.....+.+|+++.|.|.+.|.| .|.+.|++++..+.....++.. . ++ .|.|.
T Consensus 116 ~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~--~-~~-----~L~I~ 187 (329)
T 3oq3_B 116 CVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ--S-GQ-----NLIIH 187 (329)
T ss_dssp EEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE--E-TT-----EEEEC
T ss_pred eeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec--C-CC-----EEEEe
Confidence 22222222333466799999999999999 9999999975544323333322 2 34 99999
Q ss_pred ecCCCCCeEEEEEEeeC--CCCceeE----EEEEEEecCCCee--EE---EEccccccEeEEEEEeecc---CC-Cccce
Q psy15734 242 SILSHQFGSYRCVAVNA--LGETDGF----IKVYVNLVDGDIF--QI---RKMSRLHMGAYLCIASNGV---VP-SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~--~g~~~~~----~~l~V~~~~~~~~--~~---~~~~~~~~g~~~C~a~~~~---~~-~~~w~ 306 (314)
++..+|+|.|+|.|.|. .|..... +.|.|...+...+ .. ..+..++...+.|.+.+.| +| .+.|.
T Consensus 188 ~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~ 267 (329)
T 3oq3_B 188 NPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWE 267 (329)
T ss_dssp SCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEECCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEE
T ss_pred ecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceecCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEE
Confidence 99999999999999997 7666554 6677776553211 11 2344555667999999998 66 77885
No 218
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.74 E-value=4e-18 Score=135.58 Aligned_cols=180 Identities=14% Similarity=0.228 Sum_probs=99.9
Q ss_pred ceecCCcceE-EEcCCcEEEEEEecCC---Cce-EEEEEEcCceeEEEeee-eeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 23 RFAEPVANVT-ATVGKEALMACVVENL---REY-KVAWVKMITQTILSIHH-KVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 23 ~~~~~~~~~~-v~~g~~~~l~C~~~~~---~~~-~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.++.++.... +.+|++++|.|.+.+. |.+ .+.|+++++........ .....++++.. ...|.|.+++.
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~------~s~L~I~~~~~ 91 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRS------VSELPIVERDW 91 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEE------EEEEECCHHHH
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEE------EEEEEEEhhHc
Confidence 3344554444 7899999999999875 544 89999966432111000 00111222221 23799999999
Q ss_pred CCCeEEEEEEecCCCcc-eeEEE----EEEeCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCceeec
Q psy15734 97 TDRGWYMCQINTVPMTS-QKGYL----QVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKAINY 169 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~~-~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~~~~ 169 (314)
+|+|.|+|.+.+..... ....+ .+..+|.+...+... ....|+.+.|.|.+.|. |. ..+.|++ ++..
T Consensus 92 ~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~--~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~--- 165 (239)
T 1i1c_A 92 LNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPK--EEMTQSQVSITCMVKGFYPPDIYTEWKM-NGQP--- 165 (239)
T ss_dssp HTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEE---
T ss_pred cCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCCh--HHhcCCcEEEEEEEeeeECCCeEEEEEE-CCEE---
Confidence 99999999997653321 21122 222344443332111 11235556666666553 33 2556665 3322
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQF 248 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~ 248 (314)
+............++ |...+.|.|.....+|.
T Consensus 166 -----------------------------------------------l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~ 198 (239)
T 1i1c_A 166 -----------------------------------------------QENYKNTPPTMDTDGSYFLYSKLNVKKETWQQG 198 (239)
T ss_dssp -----------------------------------------------CSSEEECCCEECTTSCEEEEEEEEEEHHHHHTT
T ss_pred -----------------------------------------------CCCceecCceECCCCCEEEEEEEEEChhhcCCC
Confidence 111000111112222 55566888888777889
Q ss_pred eEEEEEEeeCCCC
Q psy15734 249 GSYRCVAVNALGE 261 (314)
Q Consensus 249 G~Y~C~a~n~~g~ 261 (314)
|.|+|.|.|....
T Consensus 199 g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 199 NTFTCSVLHEGLE 211 (239)
T ss_dssp CCEEEEEECTTSG
T ss_pred CEEEEEEECCCCC
Confidence 9999999998754
No 219
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.74 E-value=2.7e-17 Score=147.85 Aligned_cols=184 Identities=17% Similarity=0.201 Sum_probs=113.6
Q ss_pred CcceEEEcCCcEEEEEEe-cCCCceEEEEEEcCceeEEEeeee---eeecCcCEEEEeCCceeEEEEEeeecCCCCeEEE
Q psy15734 28 VANVTATVGKEALMACVV-ENLREYKVAWVKMITQTILSIHHK---VVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYM 103 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~-~~~~~~~v~W~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 103 (314)
.+.+.+.+|++++|.|.+ .+.+.+.+.|++++.......... ......|..+..+ ++|.|.+++.+|+|.|+
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~L~i~~v~~~D~G~Y~ 448 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN----GSLFLPAVGIQDEGIFR 448 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT----SCEEESSCCGGGCEEEE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC----ceEEEeccccccCeEEE
Confidence 346789999999999999 677888999999653211100000 0011234444332 27999999999999999
Q ss_pred EEEecCCC-c-ceeEEEEEEeCCceeeecCcceeEEecCce-EEEEEEecc-cCCCceEEEcCCCceeecCCeeCCCeEE
Q psy15734 104 CQINTVPM-T-SQKGYLQVVVPPRILLDRTSTDVVVREGTE-VTLECSAVG-YPEPYVAWRREDGKAINYNGELVPPMLT 179 (314)
Q Consensus 104 C~~~~~~~-~-~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~-~~l~C~~~~-~p~p~~~W~~~~~~~~~~~~~~~~p~~~ 179 (314)
|.+.+... . ...+.|.|..+|........... +..++. +.|.|.+.+ +|.|.+.|++ ++.++....
T Consensus 449 C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~~~~~~~~~l~C~~~~~~P~~~i~W~~-~g~~l~~~~-------- 518 (581)
T 3o3u_N 449 CQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASE-LTAGVPNKVGTCVSEGSYPAGTLSWHL-DGKPLVPNE-------- 518 (581)
T ss_dssp EEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSE-ECTTSCEEEEEEEEEEEBSCCEEEEEE-TTEECCTTS--------
T ss_pred EEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcc-cccCCceeEEEEECCCCCCCCeEEEEE-CCEECCCCC--------
Confidence 99976533 3 45678888876554332222222 444444 456888877 5888888888 554432100
Q ss_pred cCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeE--eeCCeeeEEEEEEeecCCCC-CeEEEEEEe
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSR--LINGYSCHMTLKIRSILSHQ-FGSYRCVAV 256 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d-~G~Y~C~a~ 256 (314)
+...... .... ..+.|...++|.|.++.++| .|.|+|+|.
T Consensus 519 ----------------------------------~~~~~~~---~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~ 561 (581)
T 3o3u_N 519 ----------------------------------KGVSVKE---QTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFS 561 (581)
T ss_dssp ----------------------------------TTEEEEE---EEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEE
T ss_pred ----------------------------------CeEEEEe---eeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEe
Confidence 0000000 0001 12236677899999999554 789999999
Q ss_pred eCCCCc
Q psy15734 257 NALGET 262 (314)
Q Consensus 257 n~~g~~ 262 (314)
|..+..
T Consensus 562 n~~~~~ 567 (581)
T 3o3u_N 562 PGLPRH 567 (581)
T ss_dssp CSSCSS
T ss_pred ccCCCC
Confidence 987544
No 220
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.74 E-value=4.2e-17 Score=128.71 Aligned_cols=81 Identities=17% Similarity=0.296 Sum_probs=55.3
Q ss_pred CcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-e---eEEEeee------eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 28 VANVTATVGKEALMACVVENL--REYKVAWVKMIT-Q---TILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
+..+.+.+|++++|.|.+.+. +...+.|||... . .+..... ......+|+.+..+. ....+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 336889999999999999652 457899999532 1 1111110 001123577776543 24568999999
Q ss_pred cCCCCeEEEEEEec
Q psy15734 95 QETDRGWYMCQINT 108 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~ 108 (314)
+.+|+|.|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (226)
T 3mlr_H 87 QASDTGKYFCTRLY 100 (226)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CcccCEEEEEeEcc
Confidence 99999999999854
No 221
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.74 E-value=6.3e-18 Score=140.25 Aligned_cols=175 Identities=13% Similarity=0.120 Sum_probs=118.8
Q ss_pred CCceeeecCcceeEEecCceEEEEEEeccc-CCCceEEEcCCCceeecCCeeC---------------------------
Q psy15734 123 PPRILLDRTSTDVVVREGTEVTLECSAVGY-PEPYVAWRREDGKAINYNGELV--------------------------- 174 (314)
Q Consensus 123 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~~~W~~~~~~~~~~~~~~~--------------------------- 174 (314)
+|.+... .+..+.+|+.+.|.|.+.+. |.+.+.|++ ++..+.......
T Consensus 7 ~P~~~~~---~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 82 (317)
T 2y25_A 7 GPHFVEY---LSWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKD 82 (317)
T ss_dssp CCEEEEE---EEEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEES
T ss_pred CCcEeee---eeEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEEC
Confidence 4555532 35778999999999999887 789999999 666655332111
Q ss_pred ---------------CCeEEcCCCcceeecCccEEEEEEEee----------cCCceeEEecCCCeeeecCCceeeeEee
Q psy15734 175 ---------------PPMLTIPNQLEGAFVSQTVELHCHTEA----------FPASLNYWTNEKGDMIITGDDYEDSRLI 229 (314)
Q Consensus 175 ---------------~p~~~~~~~~~~v~~g~~~~l~C~~~g----------~p~p~~~W~~~~~~~~~~~~~~~~~~~~ 229 (314)
+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++. .+....++......
T Consensus 83 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~-~~~~~~~~~~~~~~ 161 (317)
T 2y25_A 83 DRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGS-AIRYSDRVKTGVTG 161 (317)
T ss_dssp SSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSS-BCCCCSSEEEEECS
T ss_pred CCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCE-ECCCCCCeEEeccC
Confidence 000000112233457889999998888 7899999999754 34344444433221
Q ss_pred CCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEe------------------cCCCeeEE-----EEcccc
Q psy15734 230 NGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNL------------------VDGDIFQI-----RKMSRL 286 (314)
Q Consensus 230 ~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~------------------~~~~~~~~-----~~~~~~ 286 (314)
+ ...|.|.++..+|+|.|+|.|.|..|....++.|.|.. .+.+.+.. ..+..+
T Consensus 162 ~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g 237 (317)
T 2y25_A 162 E----QIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEG 237 (317)
T ss_dssp S----EEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETT
T ss_pred C----EEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcC
Confidence 1 24799999999999999999999999888888776531 11122221 233455
Q ss_pred ccEeEEEEEeeccCCCccce
Q psy15734 287 HMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 287 ~~g~~~C~a~~~~~~~~~w~ 306 (314)
+...+.|.+.+.|.|.+.|.
T Consensus 238 ~~~~l~C~~~g~p~p~i~W~ 257 (317)
T 2y25_A 238 KALNLTCNVWGDPPPEVSWL 257 (317)
T ss_dssp SBBCEEEEEECSSCCEEEEE
T ss_pred CEEEEEEEEecCCCCEEEEE
Confidence 55679999999999999995
No 222
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=138.43 Aligned_cols=172 Identities=15% Similarity=0.182 Sum_probs=110.9
Q ss_pred cceeEEecCceEEEEEEeccc-CCCceEEEcCCCceee----c-------------------CC--eeC-----------
Q psy15734 132 STDVVVREGTEVTLECSAVGY-PEPYVAWRREDGKAIN----Y-------------------NG--ELV----------- 174 (314)
Q Consensus 132 ~~~~~~~~g~~~~l~C~~~~~-p~p~~~W~~~~~~~~~----~-------------------~~--~~~----------- 174 (314)
+....+.+|+.+.|.|.+.+. |.+.+.|++. +.+.. . .. .+.
T Consensus 10 p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 88 (327)
T 2wng_A 10 DKSVSVAAGESAILHCTVTSLIPVGPIQWFRG-AGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGT 88 (327)
T ss_dssp CSEEEEETTSCEEECCEESCCCSCCCEEEEES-CSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEE
T ss_pred CCceEEecCCcEEEEEEccCcCCCceEEEEEC-CCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeE
Confidence 467788999999999999987 8899999994 32210 0 00 000
Q ss_pred ------------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCc--eeEEecCCCeeeecCCc
Q psy15734 175 ------------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPAS--LNYWTNEKGDMIITGDD 222 (314)
Q Consensus 175 ------------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p--~~~W~~~~~~~~~~~~~ 222 (314)
+|.+.. ....+.+|+.+.|.|.+.|.|++ .+.|++++ ..+.....
T Consensus 89 Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~--~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g-~~l~~~~~ 165 (327)
T 2wng_A 89 YYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSG--PAARATPQHTVSFTCESHGFSPRDITLKWFKNG-NELSDFQT 165 (327)
T ss_dssp EEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEEC--CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETT-EECCCEEE
T ss_pred EEEEeecCCCcceeEeecCcEEEEEEecCCCceeec--cccccCCCCEEEEEEEEeCccCCCcEEEEEECC-EEcccccc
Confidence 122221 12457889999999999999876 89999974 33322211
Q ss_pred eeeeE-eeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc---eeEEEEEEEecCCCeeEEE--EccccccEeEEEEEe
Q psy15734 223 YEDSR-LINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET---DGFIKVYVNLVDGDIFQIR--KMSRLHMGAYLCIAS 296 (314)
Q Consensus 223 ~~~~~-~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~C~a~ 296 (314)
..... ..+.+...+.|.|.....+|.|.|+|.|.|..+.. ..+..+.+.....+.+.+. .+..++...+.|.+.
T Consensus 166 ~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~~~G~~v~l~C~~~ 245 (327)
T 2wng_A 166 NVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVR 245 (327)
T ss_dssp EEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEECCSSTTCCEEEEEEE
T ss_pred ccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCCcCCCCcEEEEEEEc
Confidence 11111 12235566789998888888999999999988763 3344443323333444433 233455567999999
Q ss_pred eccCC--CccceE
Q psy15734 297 NGVVP--SVSHRI 307 (314)
Q Consensus 297 ~~~~~--~~~w~v 307 (314)
+.+++ .+.|..
T Consensus 246 g~~p~~~~v~W~k 258 (327)
T 2wng_A 246 KFYPQRLQLTWLE 258 (327)
T ss_dssp EEBSSCEEEEEEE
T ss_pred cccCCCcEEEEEE
Confidence 96555 688953
No 223
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.74 E-value=8.4e-17 Score=129.46 Aligned_cols=188 Identities=16% Similarity=0.228 Sum_probs=106.3
Q ss_pred CcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-e---eEEEeee------eeeecCcCEEEEeCC-ceeEEEEEeee
Q psy15734 28 VANVTATVGKEALMACVVENL--REYKVAWVKMIT-Q---TILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDV 94 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~ 94 (314)
+..+.+.+|++++|.|.+.+. ....+.|+|... . .+..... ......+|+.+..+. ...++|.|.++
T Consensus 30 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (256)
T 3sob_H 30 SGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSL 109 (256)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCC
Confidence 346789999999999999653 357899998532 1 1111110 001123577776543 34568999999
Q ss_pred cCCCCeEEEEEEecCCC------------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-C-CCc
Q psy15734 95 QETDRGWYMCQINTVPM------------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-P-EPY 156 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~------------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~ 156 (314)
+.+|+|.|.|.+.+.+. ......|.|.. +|.+.... ....+.+|+.+.|.|.+.+. | .+.
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~~~~p~~~~ 187 (256)
T 3sob_H 110 RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPEPVT 187 (256)
T ss_dssp CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEEC--CC-----TTEEEEEEEEEEEBSSCCE
T ss_pred CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEEC--CCcccccCCcEEEEEEEEEEECCCeE
Confidence 99999999999965320 11222444432 22232211 11123456666666666553 3 224
Q ss_pred eEEEcCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eeeEeeCCeeeE
Q psy15734 157 VAWRREDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDSRLINGYSCH 235 (314)
Q Consensus 157 ~~W~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (314)
+.| . + .......... .....++.|...
T Consensus 188 v~W-~-~--------------------------------------------------~~~~~~~~~~~~~~~~~g~~~~~ 215 (256)
T 3sob_H 188 VSW-N-S--------------------------------------------------GALTSGVHTFPAVLQSSGLYSLS 215 (256)
T ss_dssp EEE-G-G--------------------------------------------------GTBCTTEEECCCEECTTSCEEEE
T ss_pred EEE-C-C--------------------------------------------------cccCCCeEeCCceeCCCCCEEEE
Confidence 555 2 1 1110000000 001112235566
Q ss_pred EEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 236 MTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 236 s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 216 s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 216 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 799999999999 9999999998877666655544
No 224
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.74 E-value=9.5e-18 Score=130.60 Aligned_cols=176 Identities=14% Similarity=0.196 Sum_probs=91.5
Q ss_pred cCCcceE-EEcCCcEEEEEEecCCC----ceEEEEEEcCceeEEEeee--eeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 26 EPVANVT-ATVGKEALMACVVENLR----EYKVAWVKMITQTILSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 26 ~~~~~~~-v~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
.++.... +.+|+++.|.|.+.+.+ ...+.|+|++ ..+..... .....++.+.+. ..|.|......|
T Consensus 7 ~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~-~~~~~~~~~~~~~~~~g~~~~~------~~l~i~~~d~~d 79 (207)
T 1l6x_A 7 FPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG-VEVHNAKTKPREEQYNSTYRVV------SVLTVLHQDWLN 79 (207)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETT-EEECCCEECCCEECTTSCEEEE------EEEECCHHHHHT
T ss_pred eCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECC-ccccCcccCCceeccCCcEEEE------EEEEEEHHHccC
Confidence 3443333 37899999999998754 3599999955 33221100 001112222221 134444555556
Q ss_pred CeEEEEEEecCCCcc-eeEEE----EEEeCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTVPMTS-QKGYL----QVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~-~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~~~~~~ 171 (314)
+|.|+|.+.+..... ....+ .+..+|.+....... . ...|+.+.|.|.+.|. |. +.+.|++ ++..
T Consensus 80 ~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~-~-~~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~----- 151 (207)
T 1l6x_A 80 GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR-D-ELTKNQVSLTCLVKGFYPSDIAVEWES-NGQP----- 151 (207)
T ss_dssp TCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCG-G-GGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEE-----
T ss_pred CceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCCh-H-HhcCCcEEEEEEEeCeECCCeEEEEEE-CCee-----
Confidence 999999997753322 22222 222344443322111 1 1134446666666653 32 2566665 3322
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~ 250 (314)
+............++ |...+.|.|.....+|.|.
T Consensus 152 ---------------------------------------------~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~ 186 (207)
T 1l6x_A 152 ---------------------------------------------ENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNV 186 (207)
T ss_dssp ---------------------------------------------ECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCC
T ss_pred ---------------------------------------------ccCccccCceECCCCCEEEEEEEEECHHHcCCCCE
Confidence 111101111112222 5555688888888889999
Q ss_pred EEEEEeeCCCC
Q psy15734 251 YRCVAVNALGE 261 (314)
Q Consensus 251 Y~C~a~n~~g~ 261 (314)
|+|.|.|....
T Consensus 187 YtC~a~n~~l~ 197 (207)
T 1l6x_A 187 FSCSVMHEALH 197 (207)
T ss_dssp EEEEEECTTSG
T ss_pred EEEEEEcCCcC
Confidence 99999998654
No 225
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.74 E-value=4.4e-17 Score=125.65 Aligned_cols=130 Identities=16% Similarity=0.166 Sum_probs=100.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..+.....++.+....++ .+.|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEECSCCGGGCSEEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCC---EEEEEECcCCHHhCEEEEEE
Confidence 678888888889999999999999999999999999975444433444544433333 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCe-------eEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDI-------FQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~-------~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|..|.....+.|.|...+... .....+..++...+.|.+.+.|.|.+.|..
T Consensus 81 ~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 140 (197)
T 2j8h_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140 (197)
T ss_dssp EEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEE
T ss_pred EEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEE
Confidence 99999988888888887653211 012233445556799999999999999963
No 226
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.73 E-value=3.2e-17 Score=129.81 Aligned_cols=181 Identities=18% Similarity=0.201 Sum_probs=101.9
Q ss_pred CCce-ecCCcceEEEcCCcEEEEEEecCC-Cc--eEEEEEEcCceeEEEeeeee--eecCcCEEEEeCCceeEEEEEeee
Q psy15734 21 MPRF-AEPVANVTATVGKEALMACVVENL-RE--YKVAWVKMITQTILSIHHKV--VTQNKRVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 21 ~p~~-~~~~~~~~v~~g~~~~l~C~~~~~-~~--~~v~W~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~ 94 (314)
+|.+ +.++....+.+|++++|.|.+.+. |. ..+.|++++ ..+....... ...++.+.. ...|.|.++
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g-~~~~~~~~~~~~~~~~g~~~~------~s~L~I~~~ 84 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREK-SGNLRPDPMVLQEHFNGTYSA------SSAVPVSTQ 84 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSS-SSCCCCCCCEEEECTTSCEEE------EEEEECCHH
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCC-eeccccccccceECCCCcEEE------EEEEEecch
Confidence 4554 356667778899999999999874 53 499999854 3321000000 112222221 237999999
Q ss_pred cCCCCeEEEEEEecCCCcceeEEEEEE------eCCceeeecCcceeEEecCceEEEEEEeccc-C-CCceEEEcCCCce
Q psy15734 95 QETDRGWYMCQINTVPMTSQKGYLQVV------VPPRILLDRTSTDVVVREGTEVTLECSAVGY-P-EPYVAWRREDGKA 166 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~~~~~~l~v~------~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~~~W~~~~~~~ 166 (314)
+.+|+|.|+|.+.+.... ....+.|. .+|.+........ . ..++.+.|.|.+.|. | .+.+.|++ ++..
T Consensus 85 ~~~D~g~Y~C~~~~~~~~-~~~~~~v~~~~~~~~~P~v~v~~~~~~-~-~~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~ 160 (231)
T 2w59_A 85 DWLSGERFTCTVQHEELP-LPLSKSVYRNTGPTTPPLIYPFAPHPE-E-LSLSRVTLSCLVRGFRPRDIEIRWLR-DHRA 160 (231)
T ss_dssp HHHTTCCEEEEEECTTCS-SCEEEEECCCCSCCBCCEEEEECCCGG-G-GGSSEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred hccCCCEEEEEEEcCCCC-CceEEEEecCCCCCcCCEEEEeCCCHH-H-hccCceEEEEEEEeccCCCcEEEEEE-CCEE
Confidence 999999999999765322 23334442 2333322211100 0 123345555555553 2 23555555 3322
Q ss_pred eecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee--eeE---------ee-CCeee
Q psy15734 167 INYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE--DSR---------LI-NGYSC 234 (314)
Q Consensus 167 ~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~--~~~---------~~-~~~~~ 234 (314)
+....... ... .+ +.|..
T Consensus 161 --------------------------------------------------l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~ 190 (231)
T 2w59_A 161 --------------------------------------------------VPATEFVTTAVLPEERTANGAGGDGDTFFV 190 (231)
T ss_dssp --------------------------------------------------CCGGGCEECCCEECCTTSCC---CCCCEEE
T ss_pred --------------------------------------------------CCCcccccCccccCcccccccCCCCCeEEE
Confidence 21111000 011 12 23566
Q ss_pred EEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 235 HMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 235 ~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
.+.|.|.....+|.|.|+|.|.|.....
T Consensus 191 ~s~L~i~~~~~~~~g~YtC~v~n~~l~~ 218 (231)
T 2w59_A 191 YSKMSVETAKWNGGTVFACMAVHEALPM 218 (231)
T ss_dssp EEEEEEEHHHHHTTCCEEEEEECTTSTT
T ss_pred EEEEEEeHHHcCCCCcEEEEEEcCCCCC
Confidence 6799999999999999999999987643
No 227
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.72 E-value=3.8e-17 Score=131.86 Aligned_cols=187 Identities=19% Similarity=0.256 Sum_probs=104.5
Q ss_pred CcceEEEcCCcEEEEEEecCC--CceEEEEEEcCc-e---eEEEeee-----eeeecCcCEEEEeCC-ceeEEEEEeeec
Q psy15734 28 VANVTATVGKEALMACVVENL--REYKVAWVKMIT-Q---TILSIHH-----KVVTQNKRVSITFND-HRSWFLHLRDVQ 95 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~--~~~~v~W~~~~~-~---~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~L~i~~~~ 95 (314)
+..+.+.+|++++|.|.+.+. ....+.|||... . .+..... ......+|+.+..+. ...++|.|.+++
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 86 (263)
T 3iu4_H 7 SGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQ 86 (263)
T ss_dssp ECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCC
Confidence 346789999999999999753 357899998532 1 1111110 001124677776543 345689999999
Q ss_pred CCCCeEEEEEEecCCC---------cceeEEEEEEe----CCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEE
Q psy15734 96 ETDRGWYMCQINTVPM---------TSQKGYLQVVV----PPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWR 160 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~---------~~~~~~l~v~~----~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~ 160 (314)
.+|+|.|.|.+.+... ......|.|.. +|.+.... ....+..|+.+.|.|.+.+. |. +.+.|
T Consensus 87 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~--~~~~~~~g~~~~L~C~~~~~~P~~~~v~W- 163 (263)
T 3iu4_H 87 TDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLA--PSSKGSTSGTAALGCLVKDYFPEPVTVSW- 163 (263)
T ss_dssp GGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEEC--CCCCC----EEEEEEEEEEEBSSCCEEEE-
T ss_pred HHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEcc--CccccccCCcEEEEEEEEeEeCCceEEEE-
Confidence 9999999999965421 11122444432 23333211 11122356666666666653 32 35666
Q ss_pred cCCCceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce-eeeEeeCCeeeEEEEE
Q psy15734 161 REDGKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY-EDSRLINGYSCHMTLK 239 (314)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~-~~~~~~~~~~~~s~L~ 239 (314)
.. .......... .....++.|...+.|.
T Consensus 164 ~~---------------------------------------------------~~~~~~~~~~~~~~~~~g~~~~~s~L~ 192 (263)
T 3iu4_H 164 NS---------------------------------------------------GALTSGVHTFPAVLQSSGLYSLSSVVT 192 (263)
T ss_dssp GG---------------------------------------------------GTBCTTEEECCCEECTTSCEEEEEEEE
T ss_pred CC---------------------------------------------------cccCCceeecCceECCCCCEEEEEEEE
Confidence 21 1100000000 0011122255667999
Q ss_pred EeecCCCCCeEEEEEEeeCCCCceeEEEEE
Q psy15734 240 IRSILSHQFGSYRCVAVNALGETDGFIKVY 269 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 269 (314)
|.....+| |.|+|.|.|..+.......|.
T Consensus 193 i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 193 VPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp EETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred ECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 99998889 999999999887655444443
No 228
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.72 E-value=5.4e-17 Score=135.15 Aligned_cols=165 Identities=13% Similarity=0.173 Sum_probs=104.5
Q ss_pred ceEEEEEEeccc-C-CCceEEEcCCCceeecC----------CeeC----------------------------------
Q psy15734 141 TEVTLECSAVGY-P-EPYVAWRREDGKAINYN----------GELV---------------------------------- 174 (314)
Q Consensus 141 ~~~~l~C~~~~~-p-~p~~~W~~~~~~~~~~~----------~~~~---------------------------------- 174 (314)
+.+.|.|.+.+. | .+.+.|++ ++..+... +...
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~ 103 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLE-DGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTK 103 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEE-TTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeCeECCCeEEEEEE-CCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeee
Confidence 699999999986 4 46999998 66554321 1100
Q ss_pred --------CC-eEEcCCCcceeecCccEEEEEEEeec-CCc---eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEe
Q psy15734 175 --------PP-MLTIPNQLEGAFVSQTVELHCHTEAF-PAS---LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 175 --------~p-~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p---~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+| .+..++....+.+|+++.|.|.+.|. |.| .+.|+++++..+............+.+...+.|.|.
T Consensus 104 ~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~ 183 (323)
T 2wqr_A 104 KCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVG 183 (323)
T ss_dssp CCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECC
T ss_pred cCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEEC
Confidence 12 23344555567889999999999986 456 899999765544322211111112224456789999
Q ss_pred ecCCCCCeEEEEEEeeCCCCceeEEEEEEE--ecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 242 SILSHQFGSYRCVAVNALGETDGFIKVYVN--LVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~--~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
++..+|+|.|+|.|.|..+.......+.+. ....+.+.+.... .++...+.|.|.+++++ .+.|.
T Consensus 184 ~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 256 (323)
T 2wqr_A 184 TRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWL 256 (323)
T ss_dssp HHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred HHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEE
Confidence 999999999999999987544334333221 1123333332211 24556799999996554 68885
No 229
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.72 E-value=6.5e-17 Score=113.26 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=80.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+....+.+|+++.|.|.+.|.|.|.+.|++++. .+....++.+....+ .+.|.|.++..+|+|.|+|.
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~-~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRK-QIQESEHMKVENSEN----GSKLTILAARQEHCGCYTLL 81 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSS-BCCCSSSEEEEECSS----EEEEEETTCCTTTCEEEEEE
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCE-ECcCCCCEEEEEcCC----EEEEEECCCChhcCEEEEEE
Confidence 7888888888899999999999999999999999999754 344444554432211 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCe
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDI 277 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~ 277 (314)
|.|..|.....+.|.|...|.++
T Consensus 82 a~N~~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 82 VENKLGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp EECSSCEEECCEEEEEECSCSCC
T ss_pred EEECCCcEEEEEEEEEECCCCCC
Confidence 99999999999999998876554
No 230
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.71 E-value=7.3e-17 Score=123.83 Aligned_cols=133 Identities=23% Similarity=0.383 Sum_probs=97.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|..++....+.+|+++.|.|.+.+.|.+.+.|++++........++.+. ..+. .|.|.+++.+|+|.|+|.
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~C~ 80 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIR-ENGQ-----LLTILSVEDSDDGIYCCT 80 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEE-GGGT-----EEEESSCCGGGCEEEEEE
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEc-CCcc-----EEEEcCCCcccCeEEEEE
Confidence 4677777788889999999999999999999999999754333223333322 2222 799999999999999999
Q ss_pred EeeCCCCc-eeEEEEEEEec--------------------------------------------------CCCeeEEEEc
Q psy15734 255 AVNALGET-DGFIKVYVNLV--------------------------------------------------DGDIFQIRKM 283 (314)
Q Consensus 255 a~n~~g~~-~~~~~l~V~~~--------------------------------------------------~~~~~~~~~~ 283 (314)
+.|..|.. ...+.|.|... ....|.+..+
T Consensus 81 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~ 160 (192)
T 2iep_A 81 ANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNV 160 (192)
T ss_dssp EECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSC
T ss_pred EEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecC
Confidence 99998874 44555555321 1223555666
Q ss_pred cccccEeEEEEEeeccCCCccceEEEEEEe
Q psy15734 284 SRLHMGAYLCIASNGVVPSVSHRIMVTVHC 313 (314)
Q Consensus 284 ~~~~~g~~~C~a~~~~~~~~~w~v~l~v~~ 313 (314)
...|.|.|+|.|.|..+...+..+.|.|++
T Consensus 161 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 161 QKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 777788888888888776667778887765
No 231
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.71 E-value=6.5e-17 Score=113.53 Aligned_cols=99 Identities=22% Similarity=0.326 Sum_probs=81.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+.....++.+....++ .++|.|.++..+|+|.|+|.
T Consensus 15 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 15 APMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTG---RVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp CCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTC---EEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCC---eEEEEECCCCcccCEEEEEE
Confidence 788888888899999999999999999999999999975443333444444332222 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.|..|.....+.|.|...|..
T Consensus 92 a~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EEETTEEEEEEEEEEEECCSCC
T ss_pred EEcCCCeEEEEEEEEEeCCCCC
Confidence 9999999999999999887654
No 232
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=4.3e-18 Score=142.42 Aligned_cols=169 Identities=20% Similarity=0.314 Sum_probs=88.6
Q ss_pred cceeEEecCceEEEEEEeccc-CCCceEEEcCCCceeecCCeeC------------------------------------
Q psy15734 132 STDVVVREGTEVTLECSAVGY-PEPYVAWRREDGKAINYNGELV------------------------------------ 174 (314)
Q Consensus 132 ~~~~~~~~g~~~~l~C~~~~~-p~p~~~W~~~~~~~~~~~~~~~------------------------------------ 174 (314)
+....+.+|+.+.|.|.+.+. |.+.+.|++ ++..+.......
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~~~l~ 93 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVK-DGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR 93 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEE-CCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeCCeEEEEEEEE
Confidence 456778899999999999987 678999999 565543321110
Q ss_pred ---C----------------------CeEEcC----CCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceee
Q psy15734 175 ---P----------------------PMLTIP----NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYED 225 (314)
Q Consensus 175 ---~----------------------p~~~~~----~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~ 225 (314)
+ |.+..+ .....+.+|+++.|.|.+.|.|.|.+.|++++.. +....+...
T Consensus 94 V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~-~~~~~~~~~ 172 (334)
T 1ry7_B 94 VTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGRE-FRGEHRIGG 172 (334)
T ss_dssp -------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBC-CCTTSSTTC
T ss_pred EeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEE-Ccccccccc
Confidence 1 111111 1224677899999999999999999999997543 332222211
Q ss_pred -e-EeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCC--CeeE-----EEEccccccEeEEEEEe
Q psy15734 226 -S-RLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDG--DIFQ-----IRKMSRLHMGAYLCIAS 296 (314)
Q Consensus 226 -~-~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~--~~~~-----~~~~~~~~~g~~~C~a~ 296 (314)
. .... ..|.|.++..+|+|.|+|.|.|..|.....+.|.|...+. +.+. ...+..++...+.|.+.
T Consensus 173 ~~~~~~~-----~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~ 247 (334)
T 1ry7_B 173 IKLRHQQ-----WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVY 247 (334)
T ss_dssp CCCCTTT-----TEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCB
T ss_pred eecccce-----EEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEe
Confidence 1 1122 2899999999999999999999999988889998887432 1111 12344455667999999
Q ss_pred eccCCCccceE
Q psy15734 297 NGVVPSVSHRI 307 (314)
Q Consensus 297 ~~~~~~~~w~v 307 (314)
+.|.|.+.|..
T Consensus 248 g~p~p~v~W~~ 258 (334)
T 1ry7_B 248 SDAQPHIQWLK 258 (334)
T ss_dssp CSSCEEEEEEE
T ss_pred cCCCCeEEEEE
Confidence 99999999965
No 233
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=1.2e-15 Score=118.51 Aligned_cols=85 Identities=22% Similarity=0.386 Sum_probs=59.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e--eEEEeeeeeeecCcCEEEEeC--CceeEEEEEeeecCCC
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q--TILSIHHKVVTQNKRVSITFN--DHRSWFLHLRDVQETD 98 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d 98 (314)
+..++..+.+.+|++++|.|.+.+.. ..+.|+|... . .............+|+.+..+ ....++|.|.+++.+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D 82 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLED 82 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGG
T ss_pred cEECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHH
Confidence 45567789999999999999997654 3799999642 1 111111111123567777654 2345689999999999
Q ss_pred CeEEEEEEecC
Q psy15734 99 RGWYMCQINTV 109 (314)
Q Consensus 99 ~G~Y~C~~~~~ 109 (314)
+|.|.|.+.+.
T Consensus 83 ~G~Y~C~~~~~ 93 (207)
T 1ypz_E 83 SGTYFCAADTW 93 (207)
T ss_dssp CEEEEEEEECB
T ss_pred CEEEEEEEecC
Confidence 99999999653
No 234
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.70 E-value=2.1e-16 Score=107.67 Aligned_cols=94 Identities=18% Similarity=0.116 Sum_probs=76.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++......++ .++|.|.++..+|+|.|+|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDN---VCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETT---EEEEEECSCCGGGCEEEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEEC-CEECCCCCCEEEEEcCCC---EEEEEECCCCcCCCEEEEEE
Confidence 56777778888999999999999999999999999997 444444444443322332 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEe
Q psy15734 255 AVNALGETDGFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~ 272 (314)
|.|..|.....+.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 81 AINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCcEEEEEEEEEec
Confidence 999999999998888863
No 235
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=6.5e-17 Score=112.52 Aligned_cols=99 Identities=19% Similarity=0.332 Sum_probs=80.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+.....++.+....++ ...|.|.++..+|+|.|+|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDG---TCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTC---EEEEEESSCCTTTCSCCEEE
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCc---EEEEEECCCChhhCEEEEEE
Confidence 677777778888999999999999999999999999975444333445544433233 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.|..|.....+.|.|...+.+
T Consensus 85 a~N~~g~~~~~~~l~V~~~~~~ 106 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQAVNSG 106 (110)
T ss_dssp EECTTCCEEECCCEEEECCSCC
T ss_pred EEECCCeEEEEEEEEEECCCCC
Confidence 9999999999999999877644
No 236
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.70 E-value=4.3e-16 Score=129.27 Aligned_cols=178 Identities=12% Similarity=0.021 Sum_probs=112.1
Q ss_pred EEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeec-------CCeeC---------------
Q psy15734 117 YLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINY-------NGELV--------------- 174 (314)
Q Consensus 117 ~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~-------~~~~~--------------- 174 (314)
...+..+|.+...+ . ..+.+|+.++|.|.+.+. .+.+.|++ ++..+.. .+.+.
T Consensus 18 ~~~~~~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~-~~~~~W~k-~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (316)
T 3vh8_G 18 HMGGQDKPFLSAWP--S-AVVPRGGHVTLRCHYRHR-FNNFMLYK-EDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCR 92 (316)
T ss_dssp ------CCEEEEES--C-SEEETTSCEEEEEEBTTB-CCSEEEEE-SSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEE
T ss_pred ccCCCCCCEeeccC--C-CccCCCCCEEEEEEccCC-CceEEEEe-CCCccceeecCCcceEEEEECCCCcccCeEEEEE
Confidence 34555677777664 2 467899999999999887 68999999 4443211 00000
Q ss_pred --------------------------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe
Q psy15734 175 --------------------------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL 228 (314)
Q Consensus 175 --------------------------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~ 228 (314)
+|.+...+.. .+.+|++++|.|.+. .+++.+.|++++............ .
T Consensus 93 a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~--~ 168 (316)
T 3vh8_G 93 GSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGP-LVKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQI--H 168 (316)
T ss_dssp EBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCS-EEETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEE--E
T ss_pred EEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCC-ccCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeee--c
Confidence 2344433333 378999999999995 456788899875433211100000 0
Q ss_pred eCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-----eeEEEEEEEecCC-CeeEEE---EccccccEeEEEEEeecc
Q psy15734 229 INGYSCHMTLKIRSILSHQFGSYRCVAVNALGET-----DGFIKVYVNLVDG-DIFQIR---KMSRLHMGAYLCIASNGV 299 (314)
Q Consensus 229 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~-~~~~~~---~~~~~~~g~~~C~a~~~~ 299 (314)
. ......|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..... +.+... .+..++...+.|.+.. +
T Consensus 169 ~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~-~ 245 (316)
T 3vh8_G 169 D--GVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRS-S 245 (316)
T ss_dssp T--TEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCSCCCTTSCCEEEEEESS-C
T ss_pred C--CCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCCeecCCCcEEEEEECCC-C
Confidence 0 0123489999999999999999999988742 5567777776433 344433 2334555679999974 5
Q ss_pred CCCccce
Q psy15734 300 VPSVSHR 306 (314)
Q Consensus 300 ~~~~~w~ 306 (314)
.+.+.|.
T Consensus 246 ~~~~~W~ 252 (316)
T 3vh8_G 246 YDMYHLS 252 (316)
T ss_dssp CSEEEEE
T ss_pred CcEEEEE
Confidence 6778874
No 237
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.69 E-value=4.1e-16 Score=119.80 Aligned_cols=127 Identities=17% Similarity=0.147 Sum_probs=96.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+|.|..++....+.+|+++.|.|.+.+.|.+.+.|++++.. +.... ++.+....+ .+.|.|.+++.+|+|.|+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~-~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQV-ISTSTLPGVQISFSDG----RAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSB-CCTTTSTTCEEEEETT----EEEEEESSCCGGGCEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEE-cccccCCceEEEeCCC----EEEEEECCCCcccCEEEE
Confidence 56777788888999999999999999999999999997543 33322 333332221 358999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEEecCCCeeEE-----EEccccccEeEEEEEeeccCCCccce
Q psy15734 253 CVAVNALGETDGFIKVYVNLVDGDIFQI-----RKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~~~~~~~~~~-----~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|.|..|.....+.|.|.....++... ..+..++...+.|.+.+.|.|.+.|.
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 138 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFY 138 (194)
T ss_dssp EEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEE
T ss_pred EEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEE
Confidence 9999999988888888887543222222 12334455679999999999999995
No 238
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.69 E-value=1.8e-16 Score=108.16 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=75.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++ ..+............++ .+.|.|.++..+|+|.|+|.
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g-~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNG-RTVQSDDLHKMIVSEKG---LHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETT-EEECCCSSSCEEEETTT---EEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECC-EECcCCCcEEEEEcCCC---eEEEEECCCCcccCEEEEEE
Confidence 566777777888999999999999999999999999974 44444333333333332 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEec
Q psy15734 255 AVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|..|.....+.|.|..+
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEcCCCeEEEEEEEEEEec
Confidence 9999999999999888754
No 239
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.69 E-value=5.7e-17 Score=134.41 Aligned_cols=166 Identities=12% Similarity=0.122 Sum_probs=111.5
Q ss_pred ceeEEecCceEEEEEEecccC-CCceEEEcCCCceeec----C-------CeeC--------------------------
Q psy15734 133 TDVVVREGTEVTLECSAVGYP-EPYVAWRREDGKAINY----N-------GELV-------------------------- 174 (314)
Q Consensus 133 ~~~~~~~g~~~~l~C~~~~~p-~p~~~W~~~~~~~~~~----~-------~~~~-------------------------- 174 (314)
....+.+|+.+.|.|.+.+.| .+.+.|++. +..... . +.+.
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKD-DSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECT-TSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeC-CCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 356788999999999999887 789999994 432110 0 1110
Q ss_pred --------CCeEEcCC---CcceeecCccEEEEEEE------eecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEE
Q psy15734 175 --------PPMLTIPN---QLEGAFVSQTVELHCHT------EAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 175 --------~p~~~~~~---~~~~v~~g~~~~l~C~~------~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 237 (314)
+|.+...+ ....+..|+++.|.|.+ .|.|.|.+.|++++..+.....+ . ...++ .
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~--~-~~~~~-----~ 163 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH--F-SGVKD-----R 163 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSS--E-EEETT-----E
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccce--E-eecCc-----e
Confidence 11111111 12457789999999998 89999999999975443322222 1 23344 9
Q ss_pred EEEeecCCCCCeEEEEEEe-eCCCCc---eeEEEEEEEec---CCCeeEE-----EEccccccEeEEEEEeeccCCCccc
Q psy15734 238 LKIRSILSHQFGSYRCVAV-NALGET---DGFIKVYVNLV---DGDIFQI-----RKMSRLHMGAYLCIASNGVVPSVSH 305 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~-n~~g~~---~~~~~l~V~~~---~~~~~~~-----~~~~~~~~g~~~C~a~~~~~~~~~w 305 (314)
|.|.++..+|+|.|+|.|. |..|.. ...+.+.+... ..+.+.. ..+..++...+.|.+.+.|.|.+.|
T Consensus 164 L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W 243 (315)
T 1itb_B 164 LIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYW 243 (315)
T ss_dssp EEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEE
T ss_pred EEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEE
Confidence 9999999999999999999 788876 34444544421 1222211 1344555667999999999999999
Q ss_pred eE
Q psy15734 306 RI 307 (314)
Q Consensus 306 ~v 307 (314)
..
T Consensus 244 ~~ 245 (315)
T 1itb_B 244 KW 245 (315)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 240
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.68 E-value=3.3e-16 Score=121.23 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=93.7
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCC-----ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPA-----SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~-----p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+..++....+.+|+++.|.|.+.+.|. +.+.|+++++.......++.+... ........|.|.+++.+|+|.|+
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEE-QLPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGG-GGGGTEEEEEECSCCGGGCEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeec-cccCCeeEEEECCCCHHHCcEEE
Confidence 345666788999999999999999987 899999954443333333332211 00112349999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEEecCCCee-EEEEccccccEeEEEEEeeccCCCccce
Q psy15734 253 CVAVNALGETDGFIKVYVNLVDGDIF-QIRKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~~~~~~~~-~~~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|.|..+.....+.|.|...+..+. .+.....++...+.|.+.+.|.|.+.|.
T Consensus 84 C~~~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~ 138 (202)
T 3bp6_B 84 CLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQ 138 (202)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEET
T ss_pred EEEEeCCCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEE
Confidence 99999999888899999987654333 3334556666789999999999999995
No 241
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.68 E-value=1.1e-16 Score=110.35 Aligned_cols=96 Identities=26% Similarity=0.328 Sum_probs=75.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|+..+..+.+.+|+++.|.|.+.|.|.+.+.|++++ ..+ ..+.++.+..++. ...|.|.+++.+|
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g-~~l--------~~~~~~~~~~~~~-~~~L~I~~v~~~D 80 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGG-QQL--------AASERLSFPADGA-EHGLLLTAALPTD 80 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT-EEC--------CCCSSEECCEETT-EEEEEESSCCGGG
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECc-ccc--------cceeeEEEeecCc-eEEEEEecCChhh
Confidence 35789999999999999999999999999999999999954 332 3345555544433 3379999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPP 124 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p 124 (314)
+|.|+|.+.|. |.....+.|.|..+|
T Consensus 81 ~G~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 81 AGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred CEEEEEEEEECCCEEEEEEEEEEEcCC
Confidence 99999999875 555667788887765
No 242
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.68 E-value=1.4e-16 Score=108.48 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=74.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+......+.. ...++ .++|.|.++..+|+|.|+|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~-~~~~~---~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAE-EAEGG---LCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEE-ECGGG---EEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEE-ECCCC---EEEEEEccCCcCCCEEEEEE
Confidence 577777888889999999999999999999999999975433322222222 11221 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEe
Q psy15734 255 AVNALGETDGFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~ 272 (314)
|.|..|.....+.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 81 AVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCceeEEEEEEEEC
Confidence 999999999998888864
No 243
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.68 E-value=1.2e-15 Score=124.68 Aligned_cols=164 Identities=21% Similarity=0.194 Sum_probs=114.5
Q ss_pred cceeEEecCceEEEEEEecccCCCceEEEcCCCceee--c--C-CeeC--------------------------------
Q psy15734 132 STDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN--Y--N-GELV-------------------------------- 174 (314)
Q Consensus 132 ~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~--~--~-~~~~-------------------------------- 174 (314)
+....+.+|+.+.|.|.+.+ .+.|++....... . . ..+.
T Consensus 11 ~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 86 (289)
T 3ejj_X 11 GPELVVEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVK 86 (289)
T ss_dssp SSEEEECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEEC
T ss_pred CceEEECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEe
Confidence 46678899999999999877 4999974322111 0 0 0110
Q ss_pred -CCe-EEcCCCcceeecCccEEEEEEEeecCCce-eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 -PPM-LTIPNQLEGAFVSQTVELHCHTEAFPASL-NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 -~p~-~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
+|. +...+....+.+|+++.|.|.+.+.|.+. +.|++.++..+....++. ...++ .|.|.++..+|+|.|
T Consensus 87 ~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~--~~~~~-----~L~i~~v~~~d~G~Y 159 (289)
T 3ejj_X 87 DPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYF--FSPWR-----GFIIRKAKVLDSNTY 159 (289)
T ss_dssp CSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEE--EETTT-----EEEESSCCGGGCEEE
T ss_pred CCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEE--ECCCC-----CEEEeecccccCEEE
Confidence 222 45555777889999999999999988775 999876566554444333 23444 899999999999999
Q ss_pred EEEEe-eCCCCceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEee-ccCCCccce
Q psy15734 252 RCVAV-NALGETDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASN-GVVPSVSHR 306 (314)
Q Consensus 252 ~C~a~-n~~g~~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~-~~~~~~~w~ 306 (314)
+|.|. |..+.....+.|.|.... .+.+.... +..++...+.|.+.+ .|.+.+.|.
T Consensus 160 ~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~ 222 (289)
T 3ejj_X 160 VCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILK 222 (289)
T ss_dssp EEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEE
T ss_pred EEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEE
Confidence 99999 555566778888887532 23333321 234455679999998 688899995
No 244
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.68 E-value=9.7e-17 Score=108.00 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=71.7
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC-CeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK-GDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+|.|..++....+.+|+.+.|.|.+.|.|.|.+.|++++ +..+... ..... .. ..+.|.|.++..+|+|.|+|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~-~~---~~~~L~i~~~~~~D~G~Y~C 75 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDA-KS---STTSIFFPSAKRADSGNYKL 75 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEE-ET---TEEEEECTTBCGGGCEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEe-cC---CEEEEEECCCChhcCEEEEE
Confidence 577877778889999999999999999999999999975 1333222 11111 11 13589999999999999999
Q ss_pred EEeeCCCCceeEEEEEE
Q psy15734 254 VAVNALGETDGFIKVYV 270 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V 270 (314)
.|.|..|.....+.|.|
T Consensus 76 ~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 76 KVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEcCCCeEEEEEEEEE
Confidence 99999999888888876
No 245
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.68 E-value=4.7e-16 Score=119.68 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=97.3
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.+...+....+.+|+++.|.|.+.+.|.+.+.|+++ +..+....++.+... + ...+|.|.++..+|+|.|+|.
T Consensus 7 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~--~--~~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 7 APGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSD--G--RTHTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp EEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEET-TEEECCCSSEEEEES--S--SEEEEEEECCSGGGCEEEEEE
T ss_pred CCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEEC-CEECCCCccEEEEeC--C--CEEEEEEecCCccCCEEEEEE
Confidence 56777778888999999999999999999999999997 444444444444322 2 134899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCee-----EEEEccccccEeEEEEEeeccCCCccce
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDIF-----QIRKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~~-----~~~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|..|.....+.|.|...+.... ....+..++...+.|.+.+.|.|.+.|.
T Consensus 82 ~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 138 (197)
T 3lcy_A 82 ATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWF 138 (197)
T ss_dssp EECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred EECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEe
Confidence 999999888888888876542111 1112334555679999999999999995
No 246
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.68 E-value=4.5e-16 Score=129.90 Aligned_cols=121 Identities=10% Similarity=0.053 Sum_probs=87.6
Q ss_pred CCCcceeecC---ccEEEEEE-EeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 181 PNQLEGAFVS---QTVELHCH-TEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 181 ~~~~~~v~~g---~~~~l~C~-~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
.+....+.+| +.+.|.|. +.+.|.|.+.|+++........ ......+.+...+.|.|.++..+|+|.|+|.|.
T Consensus 138 ~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 214 (331)
T 3u83_A 138 TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQ---EIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214 (331)
T ss_dssp CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEE---EEECTTSCEEEEEEEEECCCGGGTTCEEEEEEE
T ss_pred CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccc---eeECCCCcEEEEEEEEEEeccccCCCEEEEEEe
Confidence 4455667788 77999997 8999999999998532221110 011112224445689999999999999999999
Q ss_pred eCCCCceeEEEEEEEecCCCeeEEEE-----ccccccEeEEEEEeeccCCC-ccce
Q psy15734 257 NALGETDGFIKVYVNLVDGDIFQIRK-----MSRLHMGAYLCIASNGVVPS-VSHR 306 (314)
Q Consensus 257 n~~g~~~~~~~l~V~~~~~~~~~~~~-----~~~~~~g~~~C~a~~~~~~~-~~w~ 306 (314)
|..|.....+.|.|..+|. +.+.. +..++...+.|.+.+.|.|. +.|.
T Consensus 215 n~~~~~~~~~~l~V~~~P~--~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~ 268 (331)
T 3u83_A 215 YHMDRFKESLTLNVQYEPE--VTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWT 268 (331)
T ss_dssp ETTEEEEEEEECCEEEEEE--EEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEE
T ss_pred cCCCcceeeEEEEEecCCe--EEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEE
Confidence 9999888899998887753 33222 33345567999999999998 9995
No 247
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.68 E-value=4e-16 Score=107.10 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=76.7
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++.+..... ..+|.|.++..+|+|.|+|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTSG----VLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEETT----EEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCEEEEECCC----EEEEEEcCCCcccCEEEEEE
Confidence 56777778888999999999999999999999999997 44444445554432211 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEec
Q psy15734 255 AVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|..|.....+.|.|...
T Consensus 83 a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 83 CTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEeCCCcEEEEEEEEEECC
Confidence 9999999999998888643
No 248
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=3.3e-16 Score=106.92 Aligned_cols=92 Identities=24% Similarity=0.291 Sum_probs=76.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++........++. ...++ +|.|.++..+|+|.|+|.
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~--~~~~~-----~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRAT--IQEQG-----TLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCE--ECTTC-----CEEEESCCTTTCCEEEEE
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEE--EcCCC-----EEEEccCCcccCEEEEEE
Confidence 77888888888999999999999999999999999997554332233322 23344 899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEec
Q psy15734 255 AVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~ 273 (314)
|.|..|.....+.|.|..+
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp EECSSCCCBCCEEEEEESC
T ss_pred EEcCCCCEEEEEEEEEecC
Confidence 9999999999999988764
No 249
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.67 E-value=1.9e-16 Score=128.62 Aligned_cols=224 Identities=14% Similarity=0.134 Sum_probs=79.6
Q ss_pred CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
.|+.+.|.+|+++.|.|.+.-..+..+.|.-.-... .. ...+.....|.|.+++.. |.|.|++
T Consensus 5 ~P~~~~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~--------~~-------~~~g~~~~~~~l~~v~~~--~~y~C~~ 67 (291)
T 1mq8_A 5 SPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKK--------EL-------LLPGNNRKVYELSNVQED--SQPMCYS 67 (291)
T ss_dssp ECSEEEECTTCEEEEEEEECCSSCSEEEEECSSCCC--------CC-------CCSCSSEEEEEEESCCSC--CCCEEEE
T ss_pred eCCccEEcCCCeEEEEEeCCCCCCccceEEecCCCc--------cc-------ccCCCceEEEEEEecccC--CeEEEEE
Confidence 356789999999999999964333348885311110 00 001111125788888743 4699999
Q ss_pred ecCC-CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CCC--ceEEEcCCCceeecCCe--------eC
Q psy15734 107 NTVP-MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP--YVAWRREDGKAINYNGE--------LV 174 (314)
Q Consensus 107 ~~~~-~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p--~~~W~~~~~~~~~~~~~--------~~ 174 (314)
...+ .....+.|.|+.+|....... ....+.+|+.++|.|.+.+. |.. .|+|++ ++..+..... +.
T Consensus 68 ~~~~~~~~~~v~l~V~~~P~~v~I~~-~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~k-g~~~l~~~~~~~~~~~~~l~ 145 (291)
T 1mq8_A 68 NCPDGQSTAKTFLTVYWTPERVELAP-LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELKREPAVGEPAEVTTT 145 (291)
T ss_dssp ECSSCEEEEECEEEECBCCSCCCBCC-CCSBCCSSCCCEEEEEECCCBSTTTEEEEEES-SSSEEEEEECCBTTEEEEEE
T ss_pred EcCCccEEEEEEEEEecCCCCCEEec-CCccccCCCCEEEEEEecCccCCCCcEEEEEE-CCEEeecccCCCCCceEEEE
Confidence 6543 334556788888877544332 22347889999999999875 544 589999 5555431110 00
Q ss_pred --------------------CC----e---------E--EcC-CC------cceeecCccEEEEEEEeecCCc---eeEE
Q psy15734 175 --------------------PP----M---------L--TIP-NQ------LEGAFVSQTVELHCHTEAFPAS---LNYW 209 (314)
Q Consensus 175 --------------------~p----~---------~--~~~-~~------~~~v~~g~~~~l~C~~~g~p~p---~~~W 209 (314)
.+ . + ..+ +. ...+.+|+++.|.|.+.|.|++ .++|
T Consensus 146 ~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w 225 (291)
T 1mq8_A 146 VLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225 (291)
T ss_dssp CCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------------------------
T ss_pred eeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEE
Confidence 00 0 0 001 11 1146789999999999998665 5788
Q ss_pred ecCCCeeeecCCceeeeEeeCCeeeEEEEEEeec---CCCC--CeEEEEEEeeCCCCceeEEEEEEEecCCCeeEE
Q psy15734 210 TNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSI---LSHQ--FGSYRCVAVNALGETDGFIKVYVNLVDGDIFQI 280 (314)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~---~~~d--~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~ 280 (314)
++++.. +.... . ..+. .+.+... .++| .+.|+|.|.|.....+....|.|+..|.+.+++
T Consensus 226 ~~~g~~-l~~~~----~-~~g~-----~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 290 (291)
T 1mq8_A 226 ALGDQR-LNPTV----T-YGND-----SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL 290 (291)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred EECCEe-cCcee----e-ecCC-----eEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCCCccEEe
Confidence 886433 32211 0 0111 2223222 3433 567889998866666777788888877776654
No 250
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.67 E-value=1.2e-15 Score=118.99 Aligned_cols=129 Identities=19% Similarity=0.315 Sum_probs=96.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecC-CCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSIL-SHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~~d~G~Y~C 253 (314)
||.|...+....+.+|+++.|.|.+.|.|.+.+.|++++. .+.. .........++ ..+.|.|.++. .+|+|.|+|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~-~~~~-~~~~~~~~~~~--~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 6 PPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGK-KVSN-QRFEVIEFDDG--SGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTE-ECCC-TTEEEEEEGGG--TEEEEEECSCCTTTTCEEEEE
T ss_pred CCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCc-CCCC-CceeEEEEcCC--CceEEEEeccCCCCCCeEEEE
Confidence 5778888888899999999999999999999999999744 3332 22222222221 13489999994 999999999
Q ss_pred EEeeCCCCceeEEEEEEEecCC-----CeeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 254 VAVNALGETDGFIKVYVNLVDG-----DIFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~-----~~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|.|..|.....+.|.|...+. +.+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~ 144 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFK 144 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEE
T ss_pred EEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEE
Confidence 9999999888888888876421 22222 123345556799999999999999954
No 251
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.67 E-value=4.2e-16 Score=128.56 Aligned_cols=130 Identities=16% Similarity=0.167 Sum_probs=99.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.+.+.|++++..+.....++.+....++ .+.|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEESSCCGGGCSEEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCC---EEEEEEccCChhhCeEEEEE
Confidence 678888888899999999999999999999999999975544433444444433333 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCee-------EEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDIF-------QIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~~-------~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|..|.....+.|.|...+.... ....+..++...+.|.+.+.|.|.+.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~ 140 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQK 140 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEE
T ss_pred EEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEE
Confidence 999999888888888876532110 01123345566799999999999999964
No 252
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=126.13 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=112.5
Q ss_pred ceeEEecCceEEEEEEec-ccCCCceEEEcCCCceeecCCeeC-------------------------------------
Q psy15734 133 TDVVVREGTEVTLECSAV-GYPEPYVAWRREDGKAINYNGELV------------------------------------- 174 (314)
Q Consensus 133 ~~~~~~~g~~~~l~C~~~-~~p~p~~~W~~~~~~~~~~~~~~~------------------------------------- 174 (314)
....+.+|+.+.|.|... +.|.+.+.|++ ++..+.......
T Consensus 9 ~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k-~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~ 87 (312)
T 2y23_A 9 VVVNVDDDGVISLNFECDKMTPKSEFSWSK-DYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSY 87 (312)
T ss_dssp CEEEECTTCCEEEEEECSSCCTTCCEEEEE-TTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEE
T ss_pred eeEEEecCCeEEEEEEEeCCCCCcEEEEEE-CCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEE
Confidence 345688999999998876 56899999999 666554221110
Q ss_pred ------------------CCeEEcCC-CcceeecCccEEEEEEEe-ecCCceeEEecCCCeeeecCCceeeeEeeCCeee
Q psy15734 175 ------------------PPMLTIPN-QLEGAFVSQTVELHCHTE-AFPASLNYWTNEKGDMIITGDDYEDSRLINGYSC 234 (314)
Q Consensus 175 ------------------~p~~~~~~-~~~~v~~g~~~~l~C~~~-g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (314)
+|.+...+ ....+.+|+++.|.|.+. +.|.+.+.|+++ +..+....++.+...... .
T Consensus 88 ~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~--~ 164 (312)
T 2y23_A 88 LIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNT--G 164 (312)
T ss_dssp EECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEET-TEEECSSSSCEEEEETTT--T
T ss_pred EEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEEC-CEECeeCCcEEEEEccCC--C
Confidence 12111111 256788999999999999 899999999997 455555555555433212 1
Q ss_pred EEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE-------------------ecCCCeeEE---EEccccccEeEE
Q psy15734 235 HMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN-------------------LVDGDIFQI---RKMSRLHMGAYL 292 (314)
Q Consensus 235 ~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------------------~~~~~~~~~---~~~~~~~~g~~~ 292 (314)
..+|.|.++..+|+|.|+|.|.|..+..... +.+. ...++.+.. ..+..++...+.
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~ 242 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLK 242 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEE
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEE
Confidence 2479999999999999999998755443333 3331 011122211 234455667799
Q ss_pred EEEeeccCC-Cccce
Q psy15734 293 CIASNGVVP-SVSHR 306 (314)
Q Consensus 293 C~a~~~~~~-~~~w~ 306 (314)
|.+.+.|+| .+.|.
T Consensus 243 C~~~~~p~~~~v~W~ 257 (312)
T 2y23_A 243 CKVANIKKETHIVWY 257 (312)
T ss_dssp EEEESCCSSCEEEEE
T ss_pred EEEcCCCCCCEEEEe
Confidence 999999888 99994
No 253
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.66 E-value=1.8e-15 Score=123.88 Aligned_cols=171 Identities=14% Similarity=0.143 Sum_probs=116.1
Q ss_pred eCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCcee----ecCCeeC-----------------------
Q psy15734 122 VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAI----NYNGELV----------------------- 174 (314)
Q Consensus 122 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~----~~~~~~~----------------------- 174 (314)
.+|.+.. .+....+.+|+.+.|.|.+.+ .+.|++ ++..+ ..+..+.
T Consensus 11 ~~P~i~~--~~~~~~v~~G~~v~l~C~~~~----~i~W~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ng~~~~ 83 (290)
T 2o26_X 11 SPPSIHP--AQSELIVEAGDTLSLTCIDPD----FVRWTF-KTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSNGLTSS 83 (290)
T ss_dssp -CCEESS--CSSEEEEETTSCEEEEEECTT----EEEEEE-ECSSSCEEEECSSEEEETTCCGGGCEEEEEEESSSCEEE
T ss_pred CCCEEeC--CCCeEEEcCCCcEEEEECCCC----cEEEec-CCcceeeecCCCceEEEeccCHHhCeEEEEEeeCCccEE
Confidence 4565553 346778999999999999987 899999 44433 1111110
Q ss_pred -------CCeEEcCCCcceeecCccEEEEEEEeecCC-ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCC
Q psy15734 175 -------PPMLTIPNQLEGAFVSQTVELHCHTEAFPA-SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSH 246 (314)
Q Consensus 175 -------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~ 246 (314)
+|.+...+....+.+|+.+.|.|.+.+ |. +.+.|++.++..+....+ .....++ .|.|.++..+
T Consensus 84 ~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~--~~~~~~~-----~L~i~~v~~~ 155 (290)
T 2o26_X 84 IYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLT--FVPNPKA-----GITIKNVKRA 155 (290)
T ss_dssp EEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCE--EEEETTT-----EEEEESCCGG
T ss_pred EEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCc--eeeCCCC-----CEEEecccHH
Confidence 333334556667889999999999996 77 999996444555443332 2223344 8999999999
Q ss_pred CCe-EEEEEEeeCCCCc-eeEEEEEEEec--CCCeeEEE----EccccccEeEEEEEeeccCCC-ccceE
Q psy15734 247 QFG-SYRCVAVNALGET-DGFIKVYVNLV--DGDIFQIR----KMSRLHMGAYLCIASNGVVPS-VSHRI 307 (314)
Q Consensus 247 d~G-~Y~C~a~n~~g~~-~~~~~l~V~~~--~~~~~~~~----~~~~~~~g~~~C~a~~~~~~~-~~w~v 307 (314)
|+| .|+|.|.|..+.. +..+.|.|... ..+.+.+. .+..++...+.|.+.+.|.|. +.|..
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~ 225 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLK 225 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEE
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEec
Confidence 999 9999999986553 34577777632 22323221 233445567999999999886 99963
No 254
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=7.2e-16 Score=106.56 Aligned_cols=95 Identities=21% Similarity=0.243 Sum_probs=76.3
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++.+.... ..+.|.|.++..+|+|.|+|.
T Consensus 13 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~ 87 (107)
T 3irg_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADG----AEHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEET----TEEEEEESSCCGGGCEEEEEE
T ss_pred CCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEEC-CeECCCCCcEEEEeCC----CEEEEEEccCCHHhCEEEEEE
Confidence 67777777888999999999999999999999999996 4444444444443221 134899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecC
Q psy15734 255 AVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~ 274 (314)
|.|..|.....+.|.|..+|
T Consensus 88 a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 88 ARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EEETTEEEEEEEEEEEEC--
T ss_pred EEcCCCcEEEEEEEEEEcCC
Confidence 99999999999998887653
No 255
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=110.03 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=79.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++.. +............++ .++|.|.++..+|+|.|+|.
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~-~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKP-VRPDSAHKMLVRENG---VHSLIIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSB-CCCCSSEEEEECTTS---CEEEEESSCCGGGCSBBCEE
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEE-CCCCCceEEEEecCC---eEEEEEeeCCcccCEEEEEE
Confidence 78888888889999999999999999999999999997443 333333332222222 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.|..|.....+.|.|..++.+
T Consensus 85 a~n~~g~~~~~~~l~V~~~p~~ 106 (110)
T 2dm3_A 85 ATNRAGQNSFSLELVVAAKESG 106 (110)
T ss_dssp EECSSCEEEECCEEEEECCCCS
T ss_pred EECCCCEEEEEEEEEEeCCCCC
Confidence 9999999999999999887654
No 256
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.65 E-value=2.7e-15 Score=121.32 Aligned_cols=211 Identities=18% Similarity=0.187 Sum_probs=108.2
Q ss_pred cceEEEcCCcEEEEEEecC--CCceEEEEEEcCc-e---eEEEeee------eeeecCcCEEEEeCC-ceeEEEEEeeec
Q psy15734 29 ANVTATVGKEALMACVVEN--LREYKVAWVKMIT-Q---TILSIHH------KVVTQNKRVSITFND-HRSWFLHLRDVQ 95 (314)
Q Consensus 29 ~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~-~---~~~~~~~------~~~~~~~~~~~~~~~-~~~~~L~i~~~~ 95 (314)
..+.+.+|++++|.|.+.+ .....+.|||... . .+..... ......+|+.+..+. ...++|.|.+++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 4578999999999999964 3457899998532 1 1111110 011124688776654 245689999999
Q ss_pred CCCCeEEEEEEecCCCcceeEEEEEEe----CCceeeecCcceeE--EecCceEEEEEEecccCCCceEEEcCCCceeec
Q psy15734 96 ETDRGWYMCQINTVPMTSQKGYLQVVV----PPRILLDRTSTDVV--VREGTEVTLECSAVGYPEPYVAWRREDGKAINY 169 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~--~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~ 169 (314)
.+|+|.|.|.+.+.... ..... .|...... .... ...|....|.........|.+.-..
T Consensus 111 ~~DsG~Y~C~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~-------- 175 (267)
T 3u1s_H 111 ADDTAIYYCLTGSKHRL-----RDYFLYNEYGPNYEEWG--DYLATLDVWGHGTAVTVSSASTKGPSVFPLA-------- 175 (267)
T ss_dssp GGGCEEEEEEEEEEEEE-----EEEEECCTTSSCEEEEE--EEEEEEEEECCCEEEEECCCCCBCCEEEEEC--------
T ss_pred hhhCEEEEEEECcCCcc-----ccccccccccccccccc--ccccccceecCCeEEEecCCCCCCCEEEEec--------
Confidence 99999999998521000 00000 00000000 0000 0012222222221111223332211
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEee-cC-CceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEEEEeecCCC
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEA-FP-ASLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTLKIRSILSH 246 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g-~p-~p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L~i~~~~~~ 246 (314)
+ ...+..|+.+.|.|.+.+ .| ++.+.| ++............... ++.|...+.|.|.....+
T Consensus 176 ------------~-~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~ 240 (267)
T 3u1s_H 176 ------------P-SSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG 240 (267)
T ss_dssp ------------C-CGGGEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGG
T ss_pred ------------C-CcccCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcC
Confidence 0 011245666666676665 33 235566 22221110000001112 233667789999999988
Q ss_pred CCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 247 QFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 247 d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
| |.|+|.|.+..+.......|.+
T Consensus 241 ~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 241 T-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp T-CCCEEEEEEGGGTEEEEEECCC
T ss_pred C-CEEEEEEEECCCCcceEEEccc
Confidence 9 9999999998766555544443
No 257
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.65 E-value=3.3e-17 Score=137.34 Aligned_cols=174 Identities=16% Similarity=0.096 Sum_probs=115.4
Q ss_pred CceeeecCcceeEEecCceEEEEEEec-------ccCCCceEEEcCCCcee--ecC---------CeeC-----------
Q psy15734 124 PRILLDRTSTDVVVREGTEVTLECSAV-------GYPEPYVAWRREDGKAI--NYN---------GELV----------- 174 (314)
Q Consensus 124 p~~~~~~~~~~~~~~~g~~~~l~C~~~-------~~p~p~~~W~~~~~~~~--~~~---------~~~~----------- 174 (314)
|.+... +....+.+|+.+.|.|.+. +.|.+.+.|++ ++..+ ... +.+.
T Consensus 19 p~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 19 RFRGRH--YKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK-NDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95 (339)
T ss_dssp EEEEEC--SCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEE-SSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEE
T ss_pred HhhCcC--ceEEEEECCccEEEEeccccccccccCCCCceEEEEE-CCCCcccCccccccEEeeCCeEEECCCCcccCEE
Confidence 444443 4677899999999999998 88999999999 45442 111 1110
Q ss_pred --------------CCeEE--cC--------CCcceeecCccEEEEEE-----EeecCCceeEEecCCCeeeecCCceee
Q psy15734 175 --------------PPMLT--IP--------NQLEGAFVSQTVELHCH-----TEAFPASLNYWTNEKGDMIITGDDYED 225 (314)
Q Consensus 175 --------------~p~~~--~~--------~~~~~v~~g~~~~l~C~-----~~g~p~p~~~W~~~~~~~~~~~~~~~~ 225 (314)
...+. .. .....+.+|+.+.|.|. +.|.|.+.+.|++++..+.....++..
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~ 175 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS 175 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE
T ss_pred EEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE
Confidence 00111 11 11235788999999999 889999999999974433322233322
Q ss_pred eEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCC----ceeEEEEEEEecC---CCeeEEE----EccccccEeEEEE
Q psy15734 226 SRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGE----TDGFIKVYVNLVD---GDIFQIR----KMSRLHMGAYLCI 294 (314)
Q Consensus 226 ~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~~---~~~~~~~----~~~~~~~g~~~C~ 294 (314)
. ...+ .|.|.++..+|+|.|+|.|.|..|. ....+.|.|...+ .+.+... .+..++...+.|.
T Consensus 176 ~-~~~~-----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~ 249 (339)
T 3o4o_C 176 V-RGTT-----HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCK 249 (339)
T ss_dssp C-TTSS-----EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCC
T ss_pred c-CCcc-----eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEE
Confidence 1 1222 8999999999999999999998874 4567777777543 1222211 1223344469999
Q ss_pred E---eecc-CCCccce
Q psy15734 295 A---SNGV-VPSVSHR 306 (314)
Q Consensus 295 a---~~~~-~~~~~w~ 306 (314)
+ .+.| ++.+.|.
T Consensus 250 ~~~~~g~P~~~~v~W~ 265 (339)
T 3o4o_C 250 VFLGTGTPLTTMLWWT 265 (339)
T ss_dssp EEESSSCCSSCEEEEE
T ss_pred EECCCCCCCCceEEEE
Confidence 9 7888 7788885
No 258
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=9.9e-16 Score=107.87 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=74.4
Q ss_pred CCeEEcC---CCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIP---NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~---~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
+|.|..+ +....+.+|+++.|.|.+.|.|.|.+.|++++.. +. ..++.+... +. .+.|.|.++..+|+|.|
T Consensus 21 ~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~-l~-~~~~~~~~~-~~---~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 21 PPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAP-LD-TSRVHVRTS-DF---DTVFFVRQAARSDSGEY 94 (118)
T ss_dssp EEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEE-CC-CSSCEEEEC-SS---EEEEEESSCCTTTCEEE
T ss_pred CCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEE-CC-CCcEEEEEC-CC---eEEEEECCCChhcCEEE
Confidence 6666543 4667889999999999999999999999997443 32 334433321 11 34799999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEEecC
Q psy15734 252 RCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
+|.|.|..|.....+.|.|...|
T Consensus 95 ~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEeCCCeEEEEEEEEEEcCC
Confidence 99999999999999999998765
No 259
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=103.96 Aligned_cols=93 Identities=19% Similarity=0.299 Sum_probs=76.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++.+....+ .++|.|.++..+|+|.|+|.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKD-GKAITQGGKYKLSEDKG----GFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEET-TEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEEC-CEECcCCCCEEEEEeCC----EEEEEECCCCcccCEEEEEE
Confidence 56777777888999999999999999999999999996 44454455555432221 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEe
Q psy15734 255 AVNALGETDGFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~ 272 (314)
|.|..|.....+.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 81 VKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEeCCCcEeEEEEEEEEe
Confidence 999999999988888863
No 260
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.65 E-value=4.4e-16 Score=125.87 Aligned_cols=117 Identities=19% Similarity=0.215 Sum_probs=82.3
Q ss_pred EEecCceEEEEEEecc-cCCC--ceEEEcCCCceeec---------------------CCe--eC---------------
Q psy15734 136 VVREGTEVTLECSAVG-YPEP--YVAWRREDGKAINY---------------------NGE--LV--------------- 174 (314)
Q Consensus 136 ~~~~g~~~~l~C~~~~-~p~p--~~~W~~~~~~~~~~---------------------~~~--~~--------------- 174 (314)
.+.+|+.+.|.|.+.+ .|.| .+.|++ ++..+.. .+. +.
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~ 92 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQT 92 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEE-TTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEe-CCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEE
Confidence 5789999999999998 7777 999999 5544321 111 11
Q ss_pred -------CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCC
Q psy15734 175 -------PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 175 -------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 247 (314)
+|.+. .....+.+|+.+.|.|.+. |.|.+.| + +..+.... ..+.|.|..+..+|
T Consensus 93 l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~-g~~~~~~~------------~~~~l~i~~~~~~~ 153 (265)
T 2oz4_A 93 VTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--N-GVPAQPLG------------PRAQLLLKATPEDN 153 (265)
T ss_dssp EEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--S-SCSSSCCS------------SEECCEEECCGGGT
T ss_pred EEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--C-CEEccCCC------------CcEEEEEccccccC
Confidence 23333 2345678899999999999 9999999 3 33331111 12378899999999
Q ss_pred CeEEEEEEeeCC-CCce---eEEEEEEEe
Q psy15734 248 FGSYRCVAVNAL-GETD---GFIKVYVNL 272 (314)
Q Consensus 248 ~G~Y~C~a~n~~-g~~~---~~~~l~V~~ 272 (314)
+|.|+|.|.|.. |... ..+.|.|..
T Consensus 154 ~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~ 182 (265)
T 2oz4_A 154 GRSFSCSATLEVAGQLIHKNQTRELRVLY 182 (265)
T ss_dssp TEEEEEEEEEECSSSEEEEEEEEEEEEEE
T ss_pred CceEEEEEEcCCCCCcccccccEEEEEEe
Confidence 999999998644 6655 667777754
No 261
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.65 E-value=1.8e-15 Score=115.97 Aligned_cols=128 Identities=13% Similarity=0.176 Sum_probs=93.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecC-CceeEEecCCCeeee-cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFP-ASLNYWTNEKGDMII-TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
|+.+...+....+.+|+++.|.|.+.+.| .+.+.|++.++..+. ...++.+...... ...|.|.++..+|+|.|+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~ 78 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD---SSTLTIYNANIDDAGIYK 78 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETT---EEEEEECSCCGGGCEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCC---ceEEEEccCCcccCEEEE
Confidence 45677788888999999999999999987 889999994454444 3444443322222 349999999999999999
Q ss_pred EEEeeCCC-CceeEEEEEEEecCCCeeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 253 CVAVNALG-ETDGFIKVYVNLVDGDIFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 253 C~a~n~~g-~~~~~~~l~V~~~~~~~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.+.|..+ .....+.|.|..+ +.+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~~--p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~ 136 (191)
T 1epf_A 79 CVVTAEDGTQSEATVNVKIFQK--LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH 136 (191)
T ss_dssp EEEEETTTEEEEEEEEEEEECC--SEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEE
T ss_pred EEEEcCCCcceEEEEEEEeecC--ceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEE
Confidence 99999984 4556666666544 33322 234455566799999999999999953
No 262
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.65 E-value=1.6e-15 Score=128.85 Aligned_cols=177 Identities=12% Similarity=0.164 Sum_probs=101.4
Q ss_pred ecCCcceE-EEcCCcEEEEEEecCC---C-ceEEEEEEcCceeEEEee-eeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 25 AEPVANVT-ATVGKEALMACVVENL---R-EYKVAWVKMITQTILSIH-HKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 25 ~~~~~~~~-v~~g~~~~l~C~~~~~---~-~~~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
+.++.... +.+|++++|.|.+.+. + ...|.|+++++....... ......++.+.. ...|.|.+++.+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~------~s~L~I~~~~~~D 244 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRS------VSELPIMHQDWLN 244 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEE------EEEEEechHhccC
Confidence 44454444 8899999999999876 2 247999996643211100 000011122221 2369999999999
Q ss_pred CeEEEEEEecCCC-cceeEEE----EEEeCCceeeecCcceeEEecCceEEEEEEeccc-C-CCceEEEcCCCceeecCC
Q psy15734 99 RGWYMCQINTVPM-TSQKGYL----QVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-P-EPYVAWRREDGKAINYNG 171 (314)
Q Consensus 99 ~G~Y~C~~~~~~~-~~~~~~l----~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p-~p~~~W~~~~~~~~~~~~ 171 (314)
+|.|+|.+.+... ......+ .+..+|.+...+.. .....|+.++|.|.+.|. | .+.|.|++ ++..+
T Consensus 245 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~--~~~~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~~---- 317 (376)
T 2aty_A 245 GKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPP--KEQMAKDKVSLTCMITDFFPEDITVEWQW-NGQPA---- 317 (376)
T ss_pred CCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCC--HHHhcCCceEEEEEEEEeECCCcEEEEEE-CCEEC----
Confidence 9999999976532 1222222 23345555443311 112346667777777664 2 33666666 33221
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEEEEeecCCCCCeE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L~i~~~~~~d~G~ 250 (314)
........... ++.|...+.|.|.....+|.|.
T Consensus 318 ----------------------------------------------~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~ 351 (376)
T 2aty_A 318 ----------------------------------------------ENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNT 351 (376)
T ss_pred ----------------------------------------------CCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCc
Confidence 11000111111 2235666789999988899999
Q ss_pred EEEEEeeCCC
Q psy15734 251 YRCVAVNALG 260 (314)
Q Consensus 251 Y~C~a~n~~g 260 (314)
|+|.|.|..-
T Consensus 352 YtC~v~h~~l 361 (376)
T 2aty_A 352 FTCSVLHEGL 361 (376)
T ss_pred EEEEEEeCCC
Confidence 9999999764
No 263
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=5.1e-16 Score=108.96 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=72.8
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeec---CCceeEEecCCCeeeec--CCceeeeEe-eC-CeeeEEEEEEeecCCCCC
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAF---PASLNYWTNEKGDMIIT--GDDYEDSRL-IN-GYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~---p~p~~~W~~~~~~~~~~--~~~~~~~~~-~~-~~~~~s~L~i~~~~~~d~ 248 (314)
+.|...+....+.+|++++|.|.+.|. |.|.|.|+|++...+.. ..++.+... .. .......|.|.++..+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456667788899999999999999875 89999999963111111 223322211 11 111245999999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEe
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNL 272 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~ 272 (314)
|.|+|+|.|..|..++.+.|.|..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999998
No 264
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.65 E-value=2e-15 Score=114.08 Aligned_cols=122 Identities=18% Similarity=0.287 Sum_probs=87.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCce-eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL-NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+|.+.+.+....+.+|+++.|.|.+.+.|.+. +.|++++ ..+.. .+. .|.|.+++.+|+|.|+|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~-~~~~~---------~~~-----~L~i~~~~~~d~G~Y~C 71 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNE-SLISS---------QAS-----SYFIDAATVNDSGEYRC 71 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETT-EEEES---------SCS-----EEEESSCCGGGCEEEEE
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECC-EEccC---------Cce-----EEEEeCCCcccCEEEEE
Confidence 56777777777899999999999999999877 7899974 33322 122 99999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEec---------------------------------------------CCCeeEEEEcccccc
Q psy15734 254 VAVNALGETDGFIKVYVNLV---------------------------------------------DGDIFQIRKMSRLHM 288 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~---------------------------------------------~~~~~~~~~~~~~~~ 288 (314)
.+.|..+.... .|.|... ....|.+..+...|.
T Consensus 72 ~~~n~~~s~~~--~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~ 149 (175)
T 1fnl_A 72 QTNLSTLSDPV--QLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDS 149 (175)
T ss_dssp ECSSSCCCCCE--EEEEECSSEEEECSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGC
T ss_pred EeeCCcccccE--EEEEeCCCceeeCCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhC
Confidence 99996664443 3433210 122344555666777
Q ss_pred EeEEEEEeeccCCCccceEEEEEEe
Q psy15734 289 GAYLCIASNGVVPSVSHRIMVTVHC 313 (314)
Q Consensus 289 g~~~C~a~~~~~~~~~w~v~l~v~~ 313 (314)
|.|+|.|.|......+-.+.|.|+-
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 150 GSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEEEEEcCCCCccCccEEEEEeC
Confidence 7788888776656666677777653
No 265
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.64 E-value=7.5e-16 Score=129.58 Aligned_cols=114 Identities=13% Similarity=-0.011 Sum_probs=75.7
Q ss_pred cceeecCccEEEEEEE-----eecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeC
Q psy15734 184 LEGAFVSQTVELHCHT-----EAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNA 258 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~-----~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 258 (314)
...+.+|+++.|.|.+ .|.|.|.+.|++++ ..+... ..+. ..+. .|.|.++..+|+|.|+|.|.|.
T Consensus 129 ~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~-~~l~~~--~~~~-~~~~-----~L~i~~v~~~d~G~Y~C~a~n~ 199 (349)
T 4dep_C 129 HKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGC-YKIQNF--NNVI-PEGM-----NLSFLIALISNNGNYTCVVTYP 199 (349)
T ss_dssp EEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETT-EECCSC--SSEE-EETT-----EEEEESCCGGGCEEEEEEEEEE
T ss_pred ceeeecCccEEEEcCCCcccccCCCCceEEEeeCC-EECCCc--ccee-ecCC-----EEEEeeeeecCCcEEEEEEEEe
Confidence 3467789999999985 78999999999974 433221 2221 2223 8999999999999999999998
Q ss_pred C-CCc---eeEEEEEEEecC----CCeeEEE------EccccccEeEEEEEee----ccCCCccce
Q psy15734 259 L-GET---DGFIKVYVNLVD----GDIFQIR------KMSRLHMGAYLCIASN----GVVPSVSHR 306 (314)
Q Consensus 259 ~-g~~---~~~~~l~V~~~~----~~~~~~~------~~~~~~~g~~~C~a~~----~~~~~~~w~ 306 (314)
. |.. ...+.|.|...+ .+.+... .+..++...+.|.+.+ .|.|.+.|.
T Consensus 200 ~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~ 265 (349)
T 4dep_C 200 ENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWT 265 (349)
T ss_dssp ETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEE
T ss_pred eCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEE
Confidence 7 443 566677776542 2222211 2233444569999994 577899994
No 266
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.64 E-value=2.2e-15 Score=115.31 Aligned_cols=126 Identities=20% Similarity=0.209 Sum_probs=94.3
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
.+..++....+.+|+++.|.|.+.+.|. .+.|+++++..+....++.+.... ..+.|.|.++..+|+|.|+|.+.
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~~~ 78 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEG----VRSRLTIYNANIEDAGIYRCQAT 78 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEET----TEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCC----CeEEEEEccCCcccCeEEEEEEE
Confidence 3556778888999999999999999988 899999656666555555443222 12499999999999999999999
Q ss_pred eCCCCc-eeEEEEEEEecCCCeeEE--EEccccccEeEEEEEeeccCCCccceE
Q psy15734 257 NALGET-DGFIKVYVNLVDGDIFQI--RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 257 n~~g~~-~~~~~l~V~~~~~~~~~~--~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|..|.. ...+.|.|..++...... ..+..++...+.|.+.+.|.|.+.|..
T Consensus 79 ~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 132 (189)
T 2v44_A 79 DAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLY 132 (189)
T ss_dssp CTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEE
T ss_pred eCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEE
Confidence 998876 667777776653211101 234455566799999999999999964
No 267
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.64 E-value=3.3e-17 Score=128.20 Aligned_cols=181 Identities=15% Similarity=0.177 Sum_probs=97.9
Q ss_pred CCce-ecCCcceEEEcCCcEEEEEEecCCCc---eEEEEEEcCceeEEEe-eeeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 21 MPRF-AEPVANVTATVGKEALMACVVENLRE---YKVAWVKMITQTILSI-HHKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 21 ~p~~-~~~~~~~~v~~g~~~~l~C~~~~~~~---~~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
+|.+ +.+|....+.+|++++|.|.+.+.++ +.+.| + +....... .......++++. ....|.|.+++
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~------~~~~L~I~~~~ 74 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYS------VSSVLPGCAEP 74 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCC------EEEECTTTHHH
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEE------EEEEEEEeHHH
Confidence 3444 45577777899999999999988643 68999 4 32211000 000001111211 23479999999
Q ss_pred CCCCeEEEEEEecCCCc-ceeEEEE---EEeCCceeeecCcceeEEecCceEEEEEEeccc-CC-CceEEEcCCCceeec
Q psy15734 96 ETDRGWYMCQINTVPMT-SQKGYLQ---VVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PE-PYVAWRREDGKAINY 169 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~-~~~~~l~---v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~-p~~~W~~~~~~~~~~ 169 (314)
.+|+|.|+|.+.+.... .....+. +..+|.+.... +....+..|+.+.|.|.+.|. |. +.+.|++ ++..
T Consensus 75 ~~D~g~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~-~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~--- 149 (214)
T 1ow0_A 75 WNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLP-PPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQE--- 149 (214)
T ss_dssp HHHTCEEEEEECCSSCSSCEEEEEECCSSCCCCEEEEEC-CCTTTTTSSSEEEEEEEEEEESSSCCEEEEEE-TTEE---
T ss_pred cCCCCeEEEEEecCCCCCceeEeeccCCCCCCCEEEecC-CCHHHhccCCceEEEEEEeeeECCCcEEEEEE-CCEE---
Confidence 99999999999764322 1122221 12334433222 111113345555555555553 32 2555555 3222
Q ss_pred CCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCce--eeeEe---eC-CeeeEEEEEEeec
Q psy15734 170 NGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDY--EDSRL---IN-GYSCHMTLKIRSI 243 (314)
Q Consensus 170 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~--~~~~~---~~-~~~~~s~L~i~~~ 243 (314)
+...... ..... .+ .|...+.|.|...
T Consensus 150 -----------------------------------------------l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~ 182 (214)
T 1ow0_A 150 -----------------------------------------------LPREKYLTWASRQEPSQGTTTFAVTSILRVAAE 182 (214)
T ss_dssp -----------------------------------------------CCGGGSEECCCEECSCSSSCCEEEEEEEEEEHH
T ss_pred -----------------------------------------------CCCCceeecCCcccccCCCCcEEEEEEEEECHH
Confidence 2111100 01111 22 2556678888877
Q ss_pred CCCCCeEEEEEEeeCCCC
Q psy15734 244 LSHQFGSYRCVAVNALGE 261 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~ 261 (314)
..+|.|.|+|.|.|....
T Consensus 183 ~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 183 DWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp HHHHTCCEEEEEECTTCT
T ss_pred HccCCCEEEEEEECCCCC
Confidence 777899999999997654
No 268
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.64 E-value=1.3e-15 Score=117.25 Aligned_cols=130 Identities=13% Similarity=0.050 Sum_probs=95.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEe-ecCCceeEEecCCCeeeecCC--ceeeeEeeCC---eeeEEEEEEeecCCCCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTE-AFPASLNYWTNEKGDMIITGD--DYEDSRLING---YSCHMTLKIRSILSHQF 248 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~-g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~---~~~~s~L~i~~~~~~d~ 248 (314)
+|.|...+....+.+|+++.|.|.+. |.|.+.+.|++++ ..+.... ++.+....++ +...+.|.|.++..+|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g-~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDG-QILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETT-EECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECC-EEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 57788888999999999999999999 9999999999974 4343331 2333322221 22246999999999999
Q ss_pred eEEEEEEeeCCCCce-eEEEEEEEecCCCeeEE----EEccccccEeEEEEEeeccCC-CccceE
Q psy15734 249 GSYRCVAVNALGETD-GFIKVYVNLVDGDIFQI----RKMSRLHMGAYLCIASNGVVP-SVSHRI 307 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~----~~~~~~~~g~~~C~a~~~~~~-~~~w~v 307 (314)
|.|+|.|.|..|... ..+.|.|...| .+.. ..+..++...+.|.+.+.|.| .+.|..
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~~p--~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 143 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEGLP--YFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQ 143 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECCSC--EEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEE
T ss_pred cEEEEEEEeCCCceecccEEEEEecCC--eEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEE
Confidence 999999999877653 34777776553 2322 133445556799999999999 899963
No 269
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.64 E-value=1.2e-15 Score=115.99 Aligned_cols=128 Identities=16% Similarity=0.115 Sum_probs=91.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.+.|.+.+.|+++ +..+....+.......+ ...+.|.|.++..+|+|.|+|.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSEQ--HWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEETT--EEEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEEC-CeecCCCCceEEEecCC--CceEEEEEeecCcccCeEEEEE
Confidence 35667778888999999999999999999999999996 44443333333322221 2245999999999999999999
Q ss_pred EeeCCCC-ceeEEEEEEEecCCCeeEE----EEccccccEeEEEEEeeccCC-CccceE
Q psy15734 255 AVNALGE-TDGFIKVYVNLVDGDIFQI----RKMSRLHMGAYLCIASNGVVP-SVSHRI 307 (314)
Q Consensus 255 a~n~~g~-~~~~~~l~V~~~~~~~~~~----~~~~~~~~g~~~C~a~~~~~~-~~~w~v 307 (314)
+.|..|. ....+.|.|..+| .+.. ..+..++...+.|.+.+.|.| .+.|..
T Consensus 79 ~~~~~~~~~~~~~~l~V~~~p--~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~ 135 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEGVP--FFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWR 135 (182)
T ss_dssp ESSCTTCEECCCEEEEEECSC--EEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEE
T ss_pred EEcCCCcEEEEEEEEEEecCC--eEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEc
Confidence 9998775 3567788887653 2222 134455556799999999988 899953
No 270
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.64 E-value=1e-15 Score=118.38 Aligned_cols=71 Identities=13% Similarity=0.028 Sum_probs=56.0
Q ss_pred EEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEE--EccccccEeEEEEEeeccCCCccce
Q psy15734 236 MTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIR--KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 236 s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
..|.|.+++.+|+|.|+|.|.|..|.....+.|.|..++.-..... .+..++...+.|.|.+.|.|.|.|.
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~ 141 (203)
T 4fa8_A 69 FFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWL 141 (203)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEEC
T ss_pred EEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEE
Confidence 4899999999999999999999999999999998876532222111 2233344569999999999999995
No 271
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.64 E-value=1.7e-15 Score=116.11 Aligned_cols=126 Identities=20% Similarity=0.300 Sum_probs=93.9
Q ss_pred CCeEEcCCC--cceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQ--LEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~--~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
||.|..... ...+.+|+++.|.|.+.+.|.+.+.|+++ +..+....++.+. ..+. .|.|.+++.+|+|.|+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~-~~~~-----~L~i~~~~~~d~G~Y~ 74 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILK-GSNT-----ELTVRNIINSDGGPYV 74 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEET-TEECCCSSSEEEE-TTTT-----EEEECSCCGGGCEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEEC-CeEcCCCccEEEe-CCee-----EEEEecCChhcCcEEE
Confidence 677776554 46788999999999999999999999997 4444444443321 2222 8999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEEecCCCeeEE-EEccccccEeEEEEEeeccCCCccceE
Q psy15734 253 CVAVNALGETDGFIKVYVNLVDGDIFQI-RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~~~~~~~~~~-~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.+.|..|.....+.|.|..+|...... ..+..++...+.|.+.+.|.|.+.|..
T Consensus 75 C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~ 130 (192)
T 2va4_A 75 CRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKR 130 (192)
T ss_dssp EEEEETTEEEEEEEEEEEEEEEEEEEECCEEECTTSEEEEEEEEEEESCCEEEEEE
T ss_pred EEEEccccccceEEEEEEEccCcccccCcceEEeCCeEEEEEEecCCCCCcEEEEe
Confidence 9999999988888888887664211110 122344556799999999999999953
No 272
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.64 E-value=1e-15 Score=117.95 Aligned_cols=88 Identities=15% Similarity=0.151 Sum_probs=62.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|++++....... ....... ....|.|.+++.+|+|.|+|.
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~-----~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPK-----NKARFSIPSMTEDYAGRYRCY 76 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSS-----SEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCC-----ceEEEEeccCCcccCceEEEE
Confidence 5666666666 7899999999999998 778999999754332110 0000001 124899999999999999999
Q ss_pred EeeCCC--CceeEEEEEE
Q psy15734 255 AVNALG--ETDGFIKVYV 270 (314)
Q Consensus 255 a~n~~g--~~~~~~~l~V 270 (314)
|.|..| ..+..+.|.|
T Consensus 77 a~n~~g~~~~s~~~~l~V 94 (196)
T 3p2t_A 77 YRSPVGWSQPSDPLELVM 94 (196)
T ss_dssp EEETTEEBCCCCCEEEEE
T ss_pred EeCCCcccCCCccEEEEe
Confidence 999987 3344555555
No 273
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.64 E-value=1.8e-14 Score=120.44 Aligned_cols=135 Identities=19% Similarity=0.261 Sum_probs=85.4
Q ss_pred cCCcceEEEcCCcEEEEEEecCCC--------------ceEEEEEEcCc---eeEEEeee-ee---ee-cCcCEEEE-e-
Q psy15734 26 EPVANVTATVGKEALMACVVENLR--------------EYKVAWVKMIT---QTILSIHH-KV---VT-QNKRVSIT-F- 81 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~~~--------------~~~v~W~~~~~---~~~~~~~~-~~---~~-~~~~~~~~-~- 81 (314)
.++..+.+.+|++++|.|.....+ ...+.||+... ..+..... .. .. ..++..+. .
T Consensus 163 tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~ 242 (401)
T 3f8u_B 163 THTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWD 242 (401)
T ss_dssp ESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEES
T ss_pred CCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeec
Confidence 466789999999999999985321 46899998532 12222111 10 00 11122121 1
Q ss_pred ------CCceeEEEEEeeecCCCCeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCc-eEEEEEEeccc-
Q psy15734 82 ------NDHRSWFLHLRDVQETDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGT-EVTLECSAVGY- 152 (314)
Q Consensus 82 ------~~~~~~~L~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~~~- 152 (314)
...++++|.|.+++.+|+|.|+|.+.+. +.....+.|.|.++|.+...+.. ...+..|+ .+.|.|.+.+.
T Consensus 243 ~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~-~~~~~~G~~~vtL~C~a~Gfy 321 (401)
T 3f8u_B 243 DDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPAT-LARAAPGEAPPELLCLVSHFY 321 (401)
T ss_dssp CCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSS-CCCCCTTCCCCCEEEEEEEEB
T ss_pred ccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCc-ceeecCCCccEEEEEEecCCc
Confidence 1124568999999999999999999764 33345567888888887654311 11134565 78889988875
Q ss_pred CC--CceEEE-c
Q psy15734 153 PE--PYVAWR-R 161 (314)
Q Consensus 153 p~--p~~~W~-~ 161 (314)
|. +.+.|. +
T Consensus 322 P~~~~~VtW~~r 333 (401)
T 3f8u_B 322 PSGGLEVEWELR 333 (401)
T ss_dssp SSTTCEEEEEEE
T ss_pred CCCCcEEEEEec
Confidence 55 678885 5
No 274
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.64 E-value=1.5e-15 Score=104.09 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=67.5
Q ss_pred ecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeee-EeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEE
Q psy15734 188 FVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDS-RLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFI 266 (314)
Q Consensus 188 ~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~-~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 266 (314)
..|+.+.|.|.+.|.|.|.+.|+++ +..+......... ...+.....+.|.|.++..+|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEEC-CEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEE
Confidence 4688999999999999999999997 4444444332221 1122233455799999999999999999999999999999
Q ss_pred EEEEEecCC
Q psy15734 267 KVYVNLVDG 275 (314)
Q Consensus 267 ~l~V~~~~~ 275 (314)
.|.|...|.
T Consensus 93 ~l~V~~~P~ 101 (103)
T 1wwb_X 93 SAHFMGWPG 101 (103)
T ss_dssp EECCSCCCC
T ss_pred EEEECCCCC
Confidence 998877654
No 275
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.64 E-value=2.4e-15 Score=115.21 Aligned_cols=119 Identities=14% Similarity=0.173 Sum_probs=89.1
Q ss_pred CCeEEcCCCcceeec-CccEEEEEEEeecCC--ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIPNQLEGAFV-SQTVELHCHTEAFPA--SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~-g~~~~l~C~~~g~p~--p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
||.|..++.. .+.+ |+++.|.|.+.+.|. +.+.|++++ ..+....... ....|.|.+++.+|+|.|
T Consensus 3 ~P~i~~~~~~-~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~-~~~~~~~~~~---------~~~~L~i~~~~~~d~G~Y 71 (190)
T 2wv3_A 3 EPRIVTSEEV-IIRDSLLPVTLQCNLTSSSHTLMYSYWTKNG-VELTATRKNA---------SNMEYRINKPRAEDSGEY 71 (190)
T ss_dssp CCEEEECCCE-ECCCSSSCEEEEEEEEECSSCEEEEEEEETT-EECTTCCBCC---------SEEEEEESSCCGGGCEEE
T ss_pred CCcccccceE-EEccCCceEEEEEEeccCCCCceEEEEEECC-EECcccceEe---------ccEEEEEecCCcccCEEE
Confidence 5677665444 4445 999999999999987 899999974 3332222111 124999999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEEecCCCeeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 252 RCVAVNALGETDGFIKVYVNLVDGDIFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
+|.|.|. |.....+.|.|..+| .+.. ..+..++...+.|.+.+.|.|.+.|..
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~~~p--~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~ 128 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVKAAP--DITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRK 128 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEECCC--EEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEE
T ss_pred EEEEEeC-CcccccEEEEEecCC--cccccCCcceeeCCCcEEEEEEeCccCCCceEEEE
Confidence 9999999 888888888888764 2322 133455556799999999999999976
No 276
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.63 E-value=8.3e-16 Score=105.97 Aligned_cols=95 Identities=14% Similarity=0.264 Sum_probs=77.0
Q ss_pred eeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 172 ELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 172 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
...+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++ ..+....++.+.... ...+|.|.++..+|+|.|
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g-~~l~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y 85 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKG-QVLSTSARHQVTTTK----YKSTFEISSVQASDEGNY 85 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSS-SCCTTCSSEEEEECS----SEEEEEECCCCSSCCSEE
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECC-EECCCCCCEEEEECC----CEEEEEECcCCchhCEEE
Confidence 334778888888999999999999999999999999999974 434344444443211 134999999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEE
Q psy15734 252 RCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~ 271 (314)
+|.|.|..|.....+.|.|.
T Consensus 86 ~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 86 SVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp EECCBCSSCBCCEEEEEEEC
T ss_pred EEEEEeCCCeEEEEEEEEEE
Confidence 99999999999999888874
No 277
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.63 E-value=1e-15 Score=119.20 Aligned_cols=139 Identities=22% Similarity=0.247 Sum_probs=93.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
||.|...+....+.+|+++.|.|.+.+.|.+.+.|++++........ ........++......|.|.++..+|+|.|+
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 88 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEE
Confidence 67788888888999999999999999999999999997543322211 1111222333222234566778999999999
Q ss_pred EEEeeCCCCc-eeEEEEEEEec----------------------------------------------------CCCeeE
Q psy15734 253 CVAVNALGET-DGFIKVYVNLV----------------------------------------------------DGDIFQ 279 (314)
Q Consensus 253 C~a~n~~g~~-~~~~~l~V~~~----------------------------------------------------~~~~~~ 279 (314)
|.|.|..|.. ...+.|.|... .+..|.
T Consensus 89 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~ 168 (212)
T 2v9r_A 89 CVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLM 168 (212)
T ss_dssp EEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEE
T ss_pred EEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEE
Confidence 9999988765 34455544221 112345
Q ss_pred EEEccccccEeEEEEEeeccCCCccceEEEEEEe
Q psy15734 280 IRKMSRLHMGAYLCIASNGVVPSVSHRIMVTVHC 313 (314)
Q Consensus 280 ~~~~~~~~~g~~~C~a~~~~~~~~~w~v~l~v~~ 313 (314)
+..+...|.|.|+|.|.|..+...+..+.|.|+.
T Consensus 169 i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 169 ITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 5566677778888888887765555567777764
No 278
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.63 E-value=3e-15 Score=116.02 Aligned_cols=121 Identities=18% Similarity=0.302 Sum_probs=86.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCce-eEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL-NYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
.|.+...+....+.+|+++.|.|.+.+.|.+. +.|++++ ..+.... . .|.|.+++.+|+|.|+|
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g-~~l~~~~---------~-----~L~i~~v~~~D~G~Y~C 71 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNE-SLISSQA---------S-----SYFIDAATVDDSGEYRC 71 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETT-EEESCCS---------S-----EEEESSCCGGGCEEEEE
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECC-EEcccCc---------c-----EEEEecccccCCEEEEE
Confidence 35666666767899999999999999999876 9999974 3332221 2 99999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEec---------------------------------------------CCCeeEEEEcccccc
Q psy15734 254 VAVNALGETDGFIKVYVNLV---------------------------------------------DGDIFQIRKMSRLHM 288 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~---------------------------------------------~~~~~~~~~~~~~~~ 288 (314)
.|.|..... .+.|.|... ....|.+..+...|.
T Consensus 72 ~a~n~~~s~--~~~l~V~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~ 149 (204)
T 3sgj_C 72 QTQLSTLSD--PVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDS 149 (204)
T ss_dssp EETTSBCCC--CEEEEEECSSEEEECSCSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGC
T ss_pred EeCCCcccc--cEEEEEecCceEecCCceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccC
Confidence 999854444 344444210 123345556677788
Q ss_pred EeEEEEEeeccCCCccceEEEEEE
Q psy15734 289 GAYLCIASNGVVPSVSHRIMVTVH 312 (314)
Q Consensus 289 g~~~C~a~~~~~~~~~w~v~l~v~ 312 (314)
|.|+|.|.|......+-.+.|.|+
T Consensus 150 G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 150 GSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEEEeCCCceecCcEEEEEe
Confidence 888888888555556667777665
No 279
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.63 E-value=2.4e-15 Score=102.53 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=73.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee--cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII--TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
||.|...+....+.+|+++.|.|.+.|.|.|.+.|++++ ..+. ...++.+. .+. ..++|.|.++..+|+|.|+
T Consensus 5 pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~-~~~~~~~~~~~~~~--~~~--~~~~L~i~~v~~~D~G~Y~ 79 (100)
T 3irg_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG-RKIHSQEQGRFHIE--NTD--DLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETT-EECCTTGGGTEEEE--ECS--SEEEEEESSCCGGGCEEEE
T ss_pred CCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECC-EEeecCCCCEEEEE--ecC--CEEEEEEeecCcccCEEEE
Confidence 566777778888999999999999999999999999964 4333 22333332 221 1348999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEE
Q psy15734 253 CVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~ 271 (314)
|.|.|..|.....+.|.|.
T Consensus 80 C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 80 LSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEEEE
Confidence 9999999998888888875
No 280
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=8.6e-16 Score=106.58 Aligned_cols=99 Identities=9% Similarity=-0.022 Sum_probs=73.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeec---CCceeEEecCCCeeeecC--CceeeeEeeC--CeeeEEEEEEeecCCCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAF---PASLNYWTNEKGDMIITG--DDYEDSRLIN--GYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~---p~p~~~W~~~~~~~~~~~--~~~~~~~~~~--~~~~~s~L~i~~~~~~d 247 (314)
++.|...+....+.+|++++|.|.+.|. |.|.|.|+|++...+... .++.+..... .......|.|.++..+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 3456667788899999999999999985 789999999632222211 2222221111 11234699999999999
Q ss_pred CeEEEEEEeeCCCCceeEEEEEEEec
Q psy15734 248 FGSYRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 248 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
+|.|+|+|.|..|..++.+.|.|..+
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999999998764
No 281
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.63 E-value=2.6e-15 Score=103.93 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=70.9
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCC---ceeEEecCCCeeeec---CCceeeeEee--CCeeeEEEEEEeecCCCC
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPA---SLNYWTNEKGDMIIT---GDDYEDSRLI--NGYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~---p~~~W~~~~~~~~~~---~~~~~~~~~~--~~~~~~s~L~i~~~~~~d 247 (314)
|.|...+....+.+|++++|.|.+.|.|. |.+.|++++. .... ..++.+.... ........|.|.+++.+|
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKW-VDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTT-EEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCc-ccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 55666777888999999999999999998 9999999642 2211 1222222111 111224589999999999
Q ss_pred CeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 248 FGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 248 ~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
+|.|+|.|.|..|...+++.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999999885
No 282
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.63 E-value=9.8e-16 Score=121.53 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=100.0
Q ss_pred CCceecCCcceE-EEcCCcEEEEEEecCCC----ceEEEEEEcCceeEEEeeee--eeecCcCEEEEeCCceeEEEEEee
Q psy15734 21 MPRFAEPVANVT-ATVGKEALMACVVENLR----EYKVAWVKMITQTILSIHHK--VVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 21 ~p~~~~~~~~~~-v~~g~~~~l~C~~~~~~----~~~v~W~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
++.++.++.... +..|+.+.|.|.+.+.. ...|.|++++ ..+...... ....++.+... ..|.|..
T Consensus 23 P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g-~~l~~~~~~~~~~~~~g~~~~~------s~L~i~~ 95 (240)
T 4acp_A 23 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG-VEVHNAKTKPREEQYNSTYRVV------SVLTVLH 95 (240)
T ss_dssp CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETT-EEECCCEECCCEEC---CEEEE------EEEECCH
T ss_pred CEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECC-cccCCceeccceECCCCeEEEE------EEEEEec
Confidence 334455666555 56799999999998853 3589999954 433211100 01123333332 2688888
Q ss_pred ecCCCCeEEEEEEecCCC-cceeEEEE----EEeCCceeeecCcceeEEecCceEEEEEEeccc-CCC-ceEEEcCCCce
Q psy15734 94 VQETDRGWYMCQINTVPM-TSQKGYLQ----VVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP-YVAWRREDGKA 166 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~-~~~~~~l~----v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p-~~~W~~~~~~~ 166 (314)
....|.|.|+|.+.+... ......+. +..+|.+....... ....|+.+.|.|.+.++ |.+ .+.|++ ++..
T Consensus 96 ~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~--~~~~g~~~~L~C~~~gf~P~~i~v~W~k-~g~~ 172 (240)
T 4acp_A 96 QDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR--DELTKNQVSLTCLVKGFYPSDIAVEWES-NGQP 172 (240)
T ss_dssp HHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCG--GGGGSSEEEEEEEEEEEBSSCCEEEEEE-TTEE
T ss_pred hhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCCh--HHhcCCceEEEEEEeEEeCCCcEEEEEE-CCEE
Confidence 888889999999976543 22222221 22345444432111 11236666677766663 433 566666 3322
Q ss_pred eecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEe-eCCeeeEEEEEEeecCC
Q psy15734 167 INYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRL-INGYSCHMTLKIRSILS 245 (314)
Q Consensus 167 ~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~~s~L~i~~~~~ 245 (314)
+ ........... ++.|...+.|.|.....
T Consensus 173 ~--------------------------------------------------~~~~~~~~~~~~dgt~~~~s~L~v~~~~~ 202 (240)
T 4acp_A 173 E--------------------------------------------------NNYKATPPVLDSDGSFFLYSKLTVDKSRW 202 (240)
T ss_dssp C--------------------------------------------------SSEEECCCEECTTSCEEEEEEEEEEHHHH
T ss_pred C--------------------------------------------------CCcCccCceECCCCCEEEEEEEEEChHHh
Confidence 1 10000001111 22255667899988887
Q ss_pred CCCeEEEEEEeeCCC
Q psy15734 246 HQFGSYRCVAVNALG 260 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g 260 (314)
.|.|.|+|.|.+..-
T Consensus 203 ~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 203 QQGNVFSCSVMHEAL 217 (240)
T ss_dssp HTTCCEEEEEECTTS
T ss_pred CCCCEEEEEEEECCC
Confidence 889999999999763
No 283
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.63 E-value=1.7e-15 Score=103.02 Aligned_cols=94 Identities=20% Similarity=0.240 Sum_probs=72.4
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ...+.++.+...+. ..+|.|.+++.+|+
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g-~~i~------~~~~~~~~~~~~~~-~~~L~I~~~~~~D~ 75 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG-RKIH------SQEQGRFHIENTDD-LTTLIIMDVQKQDG 75 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETT-EECC------TTGGGTEEEEECSS-EEEEEESSCCGGGC
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECc-eEee------eeccceeeeecccc-eEEEEEcCCCccCC
Confidence 4688888899999999999999999999999999999954 3321 12234666655443 34799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEE
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
|.|+|.+.|. |..+..+.|.|.
T Consensus 76 G~Y~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 76 GLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEECCCEEEEEEEEEEE
Confidence 9999999876 444556666664
No 284
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.62 E-value=8.9e-15 Score=117.40 Aligned_cols=167 Identities=15% Similarity=0.172 Sum_probs=81.6
Q ss_pred ecCCCCeEEEEEEecCCCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccC-----CCceEEEcCC-Ccee
Q psy15734 94 VQETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYP-----EPYVAWRRED-GKAI 167 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p-----~p~~~W~~~~-~~~~ 167 (314)
++.+|+|.|+|.+. +.......+.+..++.+... +....+.+|+.++|.|.+.+.| .+.+.|++.+ +..+
T Consensus 11 v~~~dsg~Y~C~a~--g~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS--GYSFTNYWMNWLRELVMTQS--PLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -----------------------------CCCEEEE--CSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc--hhhhhhhhhheeeceeEEeC--CceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 78899999999996 33333333444445555443 3577899999999999999887 4899999732 1110
Q ss_pred ecCCeeCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCC
Q psy15734 168 NYNGELVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 168 ~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 247 (314)
..+.. ...........++.... .. ....|.|.+++.+|
T Consensus 87 -------------------------------------~~~~~-~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v~~~D 124 (254)
T 2c1o_A 87 -------------------------------------KRLIY-LVSKLDSGDPDRFTGSG-SG---TDFTLKISRVEAED 124 (254)
T ss_dssp -------------------------------------EEEEE-TTTEECTTCCTTEEEEE-ET---TEEEEEESSCCGGG
T ss_pred -------------------------------------eEEEE-eccccCCCccceEEEec-CC---CEEEEEECcCCccc
Confidence 00000 00000000012332221 11 13489999999999
Q ss_pred CeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEEc----cccccEeEEEEEeeccCC--Cccce
Q psy15734 248 FGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 248 ~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
+|.|+|.|.|..+.. .....|.|.... .+.+.+... ..+....+.|.+.+.+++ .++|.
T Consensus 125 ~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 191 (254)
T 2c1o_A 125 LGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWK 191 (254)
T ss_dssp CSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEE
Confidence 999999999986543 223456665432 233433221 123345799999996555 47884
No 285
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=8e-16 Score=108.36 Aligned_cols=95 Identities=22% Similarity=0.291 Sum_probs=78.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.|.|.|.+.|++++..+.....++. ...++ +|.|.++..+|+|.|+|.
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~--~~~~~-----~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIK--QLENG-----VLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEE--EEETT-----EEEEESCCGGGCCCEEEE
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEE--EccCC-----EEEEccCCcCCCEEEEEE
Confidence 67777777888899999999999999999999999997544333233332 23455 899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.|..|.....+.|.|...+.+
T Consensus 81 a~n~~g~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQEFGVP 102 (118)
T ss_dssp EECSSCEEEEECCEEEECCSCC
T ss_pred EEcCCCcEEEEEEEEEEeCCCC
Confidence 9999999988999999877544
No 286
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=103.26 Aligned_cols=92 Identities=16% Similarity=0.091 Sum_probs=74.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|..++.+..+.+|+++.|.|.+ .|.|.+.|+++ +..+....++.+..... .+.|.|.++..+|+|.|+|.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~-g~~l~~~~r~~i~~~~~----~~~L~I~~v~~~D~G~Y~C~ 79 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKN-GLPVQESDRLKVVQKGR----IHKLVIANALTEDEGDYVFA 79 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEET-TEECCCCSSEEEEECSS----EEEEEESSCCGGGCSEEEEE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEEC-CEECCCCCcEEEEEeCC----EEEEEECCCChhhCEEEEEE
Confidence 5677777888899999999999999 89999999997 55555556665543221 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~ 275 (314)
|.|. ..+.++.|.|..+|.
T Consensus 80 a~N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 80 PDAY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp ESSS--CCCEEEEEEEECCSC
T ss_pred EcCC--CeeEEEEEEEeCCCC
Confidence 9998 567788888887753
No 287
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.62 E-value=3.4e-15 Score=110.34 Aligned_cols=97 Identities=19% Similarity=0.336 Sum_probs=78.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+..|+++.|.|.+.|.|.|.+.|+++ +..+....++.+....++ .+.|.|.++..+|+|.|+|.
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~-g~~~~~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKD-DNPVKESRHFQIDYDEEG---NCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEECTTC---EEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC-CEECCCCCcEEEEECCCC---eEEEEECCCChhcCEEEEEE
Confidence 67777777778899999999999999999999999997 444444455544432222 35999999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~ 275 (314)
|.|..|.....+.|.|...+.
T Consensus 117 a~N~~G~~~~~~~l~V~~~p~ 137 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETMGK 137 (154)
T ss_dssp EEETTEEEEEEEEEEEECC--
T ss_pred EEECCCeEEEEEEEEEeCcCc
Confidence 999999999999999987753
No 288
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.62 E-value=2.3e-15 Score=105.47 Aligned_cols=88 Identities=16% Similarity=0.102 Sum_probs=68.2
Q ss_pred ecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEee---CCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCcee
Q psy15734 188 FVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLI---NGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDG 264 (314)
Q Consensus 188 ~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~---~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 264 (314)
..+..+.|.|.+.|.|.|.+.|+++ +..+....+....... +.......|.|.++...|+|.|+|.|.|..|.+.+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~kn-G~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEET-TEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEEC-CEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEE
Confidence 3678999999999999999999997 5555554443333222 11112348999999999999999999999999999
Q ss_pred EEEEEEEecCCC
Q psy15734 265 FIKVYVNLVDGD 276 (314)
Q Consensus 265 ~~~l~V~~~~~~ 276 (314)
++.|.|...|..
T Consensus 92 t~~l~v~~~P~~ 103 (126)
T 1he7_A 92 SIMAAFMDNPFE 103 (126)
T ss_dssp EEEECCCSCTTS
T ss_pred EEEEEEEcCCCC
Confidence 999988877643
No 289
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=8.6e-16 Score=104.58 Aligned_cols=88 Identities=23% Similarity=0.311 Sum_probs=70.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++..+. .... . ...+ ...|.|.++..+|+|.|+|.
T Consensus 11 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~-~~~~-~---~~~~---~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 11 APSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQ-YARS-T---CEAG---VAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp EEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCS-SCCC-E---EETT---EEEEEECSCCTTCCBCEEEE
T ss_pred CCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECc-ccce-E---eeCC---eEEEEECCCChhhCEEEEEE
Confidence 6777777888889999999999999999999999999754332 2211 1 1111 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEE
Q psy15734 255 AVNALGETDGFIKVYV 270 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V 270 (314)
|.|..|.....+.|.|
T Consensus 83 a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 83 AENALGQVSCSAWVTV 98 (99)
T ss_dssp EECSSCEEEEECCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999999888887776
No 290
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=7.3e-15 Score=99.52 Aligned_cols=91 Identities=21% Similarity=0.335 Sum_probs=73.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEeec-CCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAF-PASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
.+..++....+.+|+++.|.|.+.|. |.|.+.|+++ +..+....++.+... ++ .+.|.|.++..+|+|.|+|.|
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~-~~~~~~~~~~~~~~~-~~---~~~L~i~~v~~~D~G~Y~C~a 77 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFG-VRQLENSEKYEITYE-DG---VAILYVKDITKLDDGTYRCKV 77 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEET-TEECCSSSSEEEEEE-TT---EEEEEECSCCGGGCEEEEEEE
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEEC-CEECcCCCCEEEEEc-CC---eEEEEEecCChhhCeEEEEEE
Confidence 45567778899999999999999997 9999999997 444444555554332 22 358999999999999999999
Q ss_pred eeCCCCceeEEEEEEEe
Q psy15734 256 VNALGETDGFIKVYVNL 272 (314)
Q Consensus 256 ~n~~g~~~~~~~l~V~~ 272 (314)
.|..|.....+.|.|..
T Consensus 78 ~n~~g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 78 VNDYGEDSSYAELFVKG 94 (97)
T ss_dssp ECSSCEEEEEEEEEETT
T ss_pred ECCCCeEeEEEEEEEEe
Confidence 99999998888887754
No 291
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.61 E-value=4.5e-15 Score=113.16 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=60.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+.. .+.+|++++|.|.+.+ |.+.+.|++++.. ....++ .|.|.+++.+|+|.|+|.
T Consensus 8 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~----------~~~~~~-----~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 8 KPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS----------RYQDQA-----VLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC----------CEESSS-----EEEESSCCGGGCEEEEEE
T ss_pred CCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc----------ccCccc-----EEEECcCChhhCceEEEE
Confidence 5667666654 7899999999999988 7889999997544 112233 999999999999999999
Q ss_pred EeeCCCC--ceeEEEEEE
Q psy15734 255 AVNALGE--TDGFIKVYV 270 (314)
Q Consensus 255 a~n~~g~--~~~~~~l~V 270 (314)
|.|..|. .+..+.|.|
T Consensus 71 a~n~~g~~~~s~~~~l~V 88 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVA 88 (184)
T ss_dssp EEETTEEBCCCCCEEEEE
T ss_pred EEcCCCccCCCCCEEEEe
Confidence 9998753 234455555
No 292
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.61 E-value=6e-15 Score=112.69 Aligned_cols=127 Identities=20% Similarity=0.148 Sum_probs=89.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++..... ....+.....++ .|.|.++..+|+|.|+|.
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~-~~~~~~~~~~~~-----~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT-ISDNRFAMLANN-----NLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CB-CCCTTEEECTTS-----CEEETTCCGGGCEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCcccee-ccCCeEEEecCC-----CEEEeeCCHhHCcEEEEE
Confidence 46777788888999999999999999999999999997544332 222222223344 899999999999999999
Q ss_pred EeeCCCCce--eEEEEEEEecCCCee----EEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 255 AVNALGETD--GFIKVYVNLVDGDIF----QIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 255 a~n~~g~~~--~~~~l~V~~~~~~~~----~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
+.|..+... ..+.+.|..++.... ....+..++...+.|.+.+.|.|.+.|..
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~ 134 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 134 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE
T ss_pred EEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE
Confidence 999876543 455555555432111 11234455666799999999999999953
No 293
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=1.1e-15 Score=110.29 Aligned_cols=86 Identities=14% Similarity=0.153 Sum_probs=67.2
Q ss_pred CCcceeecCccEEEEEEEeecCCceeEEecCCC---------------------------eee-ecCCceeeeEeeCCee
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG---------------------------DMI-ITGDDYEDSRLINGYS 233 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~---------------------------~~~-~~~~~~~~~~~~~~~~ 233 (314)
+....+.+|+++.|.|.+.|.|.|.+.|++++. ..+ ....++.+....+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~--- 101 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD--- 101 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT---
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC---
Confidence 456789999999999999999999999999762 222 1223333322111
Q ss_pred eEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEE
Q psy15734 234 CHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 234 ~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 271 (314)
.+.|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 102 -~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 102 -RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp -EEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -EEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 3589999999999999999999999999888888774
No 294
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.61 E-value=5e-15 Score=126.36 Aligned_cols=128 Identities=17% Similarity=0.186 Sum_probs=94.0
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC-Ceeeec-----CCceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK-GDMIIT-----GDDYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~-~~~~~~-----~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
+|.|.. +....+.+|+++.|.|.+.|.|.|.+.|++++ +..+.. ..++.+.. +. ..+.|.|.++..+|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~--~~--~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG--QH--GSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEE--CS--SEEEEEEESCCGGGC
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEec--cC--CcceEEEcccChhhC
Confidence 466666 44567788999999999999999999999973 333322 22332221 11 135999999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEecCCCe--eEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNLVDGDI--FQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~--~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|+|.|.|..|..+..+.|.|..+|.-. .....+..++...+.|.+.+.|.+.+.|..
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~ 136 (389)
T 2jll_A 76 GRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRR 136 (389)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEE
T ss_pred EEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEE
Confidence 99999999999999999999998764211 111233455566799999999999999953
No 295
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.61 E-value=3.5e-14 Score=117.56 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=116.9
Q ss_pred eeeeeeeccCCCCCceecCCcceEEEcCCcEEEEEEec-CCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeE
Q psy15734 9 CTYFKTKCEKPDMPRFAEPVANVTATVGKEALMACVVE-NLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSW 87 (314)
Q Consensus 9 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (314)
.......+.+...|.+...+....+..|+.+.|.|.+. +.|.+.+.|++++.. +..........++.+... .
T Consensus 105 ~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~-~~~~~~~~~~~~~~~~~~------s 177 (313)
T 4fqp_A 105 SRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGG-MPNTSQVPGFLSGTVTVT------S 177 (313)
T ss_dssp EEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCC-EEEEEEEECSSTTCEEEE------E
T ss_pred ceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcc-ccccceeeeecccccccc------e
Confidence 33344445556677777777777788899999999875 578899999995543 332222222233333332 2
Q ss_pred EEEEeeecCCCCeEEEEEEecCC---CcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCC-ceEEEcCC
Q psy15734 88 FLHLRDVQETDRGWYMCQINTVP---MTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEP-YVAWRRED 163 (314)
Q Consensus 88 ~L~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p-~~~W~~~~ 163 (314)
.|.|.+.+..|.|.|+|.+.+.. .....+.|.|..+|.+.... .....+.+|+.+.|.|.+.|+|.| .+.|++ +
T Consensus 178 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~-~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~-~ 255 (313)
T 4fqp_A 178 LWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISG-YDNNWYLGQNEATLTCDARSNPEPTGYNWST-T 255 (313)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEEC-CCSCEETTCCCEEEEEEEEEESCCCEEEEEE-T
T ss_pred eeeecccccccCeeEEEEEEccCcCccceeeeecccccCCcccccc-ccceeecCCCeEEEEEEecCCCCCcEEEEEE-C
Confidence 69999999999999999997742 22344566677778765543 334456788999999999999999 699999 6
Q ss_pred CceeecCCeeCCCeEEcCCCcceeecCccEEEEEEEe
Q psy15734 164 GKAINYNGELVPPMLTIPNQLEGAFVSQTVELHCHTE 200 (314)
Q Consensus 164 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~ 200 (314)
+.++.......-..+.+. .+...+.-...|.|.
T Consensus 256 ~~~l~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~ 288 (313)
T 4fqp_A 256 MGPLPPFAVAQGAQLLIR----PVDKPINTTLICNVT 288 (313)
T ss_dssp TBSCCTTEEEETTEEEEC----CCSSCCEEEEEEEEE
T ss_pred CEECCCceEEeCCEEEEC----cCChhhCEEEEEEEE
Confidence 665543222111122221 234456667778775
No 296
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.61 E-value=1.9e-15 Score=124.90 Aligned_cols=121 Identities=14% Similarity=-0.004 Sum_probs=80.5
Q ss_pred CCcceeecCccEEEEEEE-eecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 182 NQLEGAFVSQTVELHCHT-EAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~-~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
+.......|+.+.|.|.+ .|.|.|.+.|++++..+..... ......+...+.|.|..+..+|+|.|+|.|.|..+
T Consensus 121 ~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~----~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 196 (308)
T 4fom_A 121 PDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTT----SFPNETATIISQYKLFPTRFARGRRITCVVKHPAL 196 (308)
T ss_dssp SSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEE----ECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTC
T ss_pred cceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccc----eeeeecccccccceEEeeeecCCccEEEEEEccCC
Confidence 444455678899999975 7899999999998654332111 11122234456899999999999999999999987
Q ss_pred CceeE--EEEEEEecCCCeeEEE---EccccccEeEEEEEeeccCC-Cccce
Q psy15734 261 ETDGF--IKVYVNLVDGDIFQIR---KMSRLHMGAYLCIASNGVVP-SVSHR 306 (314)
Q Consensus 261 ~~~~~--~~l~V~~~~~~~~~~~---~~~~~~~g~~~C~a~~~~~~-~~~w~ 306 (314)
..... +.|.|..+|...+... .+..++...+.|.+.+.|+| .+.|.
T Consensus 197 ~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~ 248 (308)
T 4fom_A 197 EKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWS 248 (308)
T ss_dssp SSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECC
T ss_pred CCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEE
Confidence 76544 4444544432111111 12223344699999999988 68895
No 297
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.60 E-value=1.2e-15 Score=105.63 Aligned_cols=94 Identities=17% Similarity=0.269 Sum_probs=65.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.+...+....+.+|+++.|.|.+.|.|.|.+.|++++... .....+.. ...+. .|.|.++..+|+|.|+|.
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~-~~~~~~~~-~~~~~-----~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETL-VEDSGIVL-KDGNR-----NLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBC-CCBTTEEE-ETTTT-----EEEECSCCGGGCEEEEEE
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEc-ccCCCeEE-eCCCc-----EEEEeecCcccCEEEEEE
Confidence 566666777788999999999999999999999999975443 33333222 12233 899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~ 275 (314)
|.|..|.....+.|.|...+.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EC----CEEEEEEEEEEC---
T ss_pred EEeCCCceEEEEEEEEeCCCc
Confidence 999999999999999987654
No 298
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.60 E-value=2.1e-15 Score=101.81 Aligned_cols=86 Identities=15% Similarity=0.287 Sum_probs=70.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.+...+....+.+|+++.|.|.+.|.| |.+.|+++ +..+....++.+. ++ .|.|.+++.+|+|.|+|.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~---~~-----~L~i~~~~~~D~G~Y~C~ 78 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRIT---GE-----EVEVRDSIPADSGLYACV 78 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBT-TBCCCCCSSEEEC---SS-----EEEESSCCGGGSEEEEEE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEEC-CEecCCCCCEEEe---CC-----EEEECCCChHHCEEEEEE
Confidence 56666677788899999999999999998 89999996 4444344443322 33 999999999999999999
Q ss_pred EeeCCCCceeEEEEEE
Q psy15734 255 AVNALGETDGFIKVYV 270 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V 270 (314)
|.|..|.....+.|.|
T Consensus 79 a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 79 TSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred eccCCCcEEEEEEEEE
Confidence 9999999888888876
No 299
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=7.8e-15 Score=99.77 Aligned_cols=94 Identities=17% Similarity=0.285 Sum_probs=75.3
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|..++..+.+.+|+++.|.|.+ .+.+.+.|+|++ .. +..+.++.+..++.. ..|.|.+++.+|
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g-~~--------l~~~~r~~i~~~~~~-~~L~I~~v~~~D 72 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNG-LP--------VQESDRLKVVQKGRI-HKLVIANALTED 72 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETT-EE--------CCCCSSEEEEECSSE-EEEEESSCCGGG
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECC-EE--------CCCCCcEEEEEeCCE-EEEEECCCChhh
Confidence 457889999999999999999999999 677899999954 33 234556666655432 379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.|. ..+..+.|.|..+|.
T Consensus 73 ~G~Y~C~a~N~-~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 73 EGDYVFAPDAY-NVTLPAKVHVISGPS 98 (100)
T ss_dssp CSEEEEEESSS-CCCEEEEEEEECCSC
T ss_pred CEEEEEEEcCC-CeeEEEEEEEeCCCC
Confidence 99999999876 556778899988764
No 300
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.60 E-value=2.4e-15 Score=113.82 Aligned_cols=124 Identities=17% Similarity=0.266 Sum_probs=87.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+|.+...+....+.+|+++.|.|.+.+.|.+ .+.|++++.. +.. .+. .|.|.+++.+|+|.|+|
T Consensus 4 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~-~~~---------~~~-----~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 4 KPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSL-SEE---------TNS-----SLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEE-CSC---------CSS-----EEEECSCCGGGCEEEEE
T ss_pred CCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeE-CCC---------Cce-----EEEEeccceecCEEEEE
Confidence 4566667777789999999999999999886 6899997433 221 122 99999999999999999
Q ss_pred EEeeCCCCceeEEEEEE----------------------Ee---------------------cCCCeeEEEEccccccEe
Q psy15734 254 VAVNALGETDGFIKVYV----------------------NL---------------------VDGDIFQIRKMSRLHMGA 290 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V----------------------~~---------------------~~~~~~~~~~~~~~~~g~ 290 (314)
.+.|..+.....+.+.. .. ..+..|.+..+...|.|.
T Consensus 69 ~~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~ 148 (176)
T 1f2q_A 69 QHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGT 148 (176)
T ss_dssp ECTTSSCCCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEE
T ss_pred EcCCccccccEEEEEeCcceeecCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEE
Confidence 99997765554444320 00 013445666777788888
Q ss_pred EEEEEeeccCCCccceEEEEEEe
Q psy15734 291 YLCIASNGVVPSVSHRIMVTVHC 313 (314)
Q Consensus 291 ~~C~a~~~~~~~~~w~v~l~v~~ 313 (314)
|+|.|.|......+-.++|.|+.
T Consensus 149 Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 149 YYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp EEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEEeCCcceEecCEEEEEec
Confidence 88888886555566677777764
No 301
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.59 E-value=8.7e-15 Score=119.80 Aligned_cols=170 Identities=22% Similarity=0.219 Sum_probs=112.2
Q ss_pred eCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceee--cCC---eeC----------------------
Q psy15734 122 VPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAIN--YNG---ELV---------------------- 174 (314)
Q Consensus 122 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~--~~~---~~~---------------------- 174 (314)
.+|.+... +....+.+|+.+.|.|.+.+. +.|++....... ... .+.
T Consensus 3 ~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 76 (292)
T 4dkd_C 3 SIPVIEPS--VPELVVKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLG 76 (292)
T ss_dssp -CCEEESC--CSSCEECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----
T ss_pred CCceecCC--CCeEEEcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCC
Confidence 35655544 356689999999999998873 889863221111 100 000
Q ss_pred -----------CCe-EEcCCCcceeecCccEEEEEEEeecCC--ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEE
Q psy15734 175 -----------PPM-LTIPNQLEGAFVSQTVELHCHTEAFPA--SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 175 -----------~p~-~~~~~~~~~v~~g~~~~l~C~~~g~p~--p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i 240 (314)
+|. +...+....+.+|+++.|.|.+.+ |. +.+.|+++++..+.....+.. ..++ .|.|
T Consensus 77 ~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~--~~~~-----~L~i 148 (292)
T 4dkd_C 77 GSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSF--SPWH-----GFTI 148 (292)
T ss_dssp CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEEC--CSSS-----CCEE
T ss_pred cceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccc--cCCc-----eEEE
Confidence 232 344556678899999999999998 54 789999975555544433322 2233 6999
Q ss_pred eecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeeccCC-Cccc
Q psy15734 241 RSILSHQFGSYRCVAVNALGET-DGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNGVVP-SVSH 305 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~~~~-~~~w 305 (314)
.++..+|+|.|+|.|.|..+.. +..+.|.|.... .+.+.... +..++...+.|.+.+.+++ .+.|
T Consensus 149 ~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w 221 (292)
T 4dkd_C 149 HRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFL 221 (292)
T ss_dssp TTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEEC
T ss_pred CCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEE
Confidence 9999999999999999987755 447888887632 23333322 1344455799999987643 4566
No 302
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.59 E-value=3e-14 Score=112.22 Aligned_cols=126 Identities=16% Similarity=0.181 Sum_probs=89.1
Q ss_pred CCCcceeecCccEEEEEEEeecCCc---eeEEecCCCeeeec---C---------Cc--eeeeEeeCC-eeeEEEEEEee
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPAS---LNYWTNEKGDMIIT---G---------DD--YEDSRLING-YSCHMTLKIRS 242 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p---~~~W~~~~~~~~~~---~---------~~--~~~~~~~~~-~~~~s~L~i~~ 242 (314)
|...+.+.+|+++.|.|.+.+.+.+ .+.|++++...... . .. .+....... .....+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 4556788999999999999887665 68999975432210 0 00 011111111 12245899999
Q ss_pred cCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeec-cCCCccce
Q psy15734 243 ILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNG-VVPSVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~-~~~~~~w~ 306 (314)
++.+|+|.|+|.|.|..|.....+.+.+............+..+....+.|.+.+. |.|.|+|.
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~ 154 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWS 154 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEE
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEE
Confidence 99999999999999998888777777776665555555555566667799999985 88999995
No 303
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.59 E-value=1e-14 Score=97.70 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=68.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|..++.+..+.+|+++.|.|.+.+ |+|.+.|+++ +..+....++.+..... ..+|.|.+++.+|+|.|+|.
T Consensus 5 ~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~-g~~i~~~~~~~i~~~g~----~~~L~I~~v~~~D~G~Y~C~ 78 (93)
T 1waa_A 5 LIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLK-GQPLAASPDCEIIEDGK----KHILILHNCQLGMTGEVSFQ 78 (93)
T ss_dssp CCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEET-TEECCCBTTEEEEEETT----EEEEEECSCCGGGCEEEEEE
T ss_pred CcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEEC-CEECcCCCCEEEEEECC----EEEEEECCCChhhCEEEEEE
Confidence 677888888899999999999999986 5588999997 55555556665543221 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEe
Q psy15734 255 AVNALGETDGFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~ 272 (314)
|.|. ..+..|.|..
T Consensus 79 a~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 79 AANT----KSAANLKVKE 92 (93)
T ss_dssp ETTE----EEEEEEEEEC
T ss_pred ECCC----cEEEEEEEEc
Confidence 9874 3566676653
No 304
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.59 E-value=2.9e-14 Score=99.63 Aligned_cols=99 Identities=13% Similarity=0.197 Sum_probs=77.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. +..+.++.+.... ....|.|.+++.+|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~---------~~~~~~~~~~~~~-~~~~L~I~~v~~~D 74 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQ---------IQESEHMKVENSE-NGSKLTILAARQEH 74 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSB---------CCCSSSEEEEECS-SEEEEEETTCCTTT
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEE---------CcCCCCEEEEEcC-CEEEEEECCCChhc
Confidence 3578898899999999999999999999999999999995533 2233456555432 23489999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCcee
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRIL 127 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~ 127 (314)
+|.|+|.+.|. +.....+.|.|..+|...
T Consensus 75 ~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~P 104 (114)
T 2cqv_A 75 CGCYTLLVENKLGSRQAQVNLTVVDKPDPP 104 (114)
T ss_dssp CEEEEEEEECSSCEEECCEEEEEECSCSCC
T ss_pred CEEEEEEEEECCCcEEEEEEEEEECCCCCC
Confidence 99999999775 555666788888766543
No 305
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.59 E-value=1.2e-14 Score=122.05 Aligned_cols=119 Identities=13% Similarity=0.041 Sum_probs=73.9
Q ss_pred eeecCccEEEEEEEeec-CC-ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCce
Q psy15734 186 GAFVSQTVELHCHTEAF-PA-SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETD 263 (314)
Q Consensus 186 ~v~~g~~~~l~C~~~g~-p~-p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 263 (314)
.+.+|+++.|.|.+.|. |. +.+.|++++........ .......+.|...+.|.|.++..+| |.|+|.|.|..+...
T Consensus 131 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 131 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF-PAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp TTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEEC-CCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred cccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeEC-CCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 45789999999999997 54 79999997543211100 0011112335556799999999888 999999999988654
Q ss_pred eEEEEE--E--------------------EecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 264 GFIKVY--V--------------------NLVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 264 ~~~~l~--V--------------------~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
....+. | .....+.+.+.... ......+.|.|.+++++ .++|.
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 279 (344)
T 1za6_B 209 VDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWE 279 (344)
T ss_dssp EEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEE
T ss_pred ceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEE
Confidence 333222 1 11122333332211 22336799999997554 67884
No 306
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.59 E-value=1.5e-14 Score=99.95 Aligned_cols=105 Identities=24% Similarity=0.393 Sum_probs=77.5
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
...|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++.+...+... ......+.|+.+.......++|.|.+++.+|
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFD-DKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEET-TEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEc-CCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 345788888899999999999999999998888999999654333221 1222345577765544456689999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCC
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPP 124 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p 124 (314)
+|.|+|.+.+.+..+..+.|.|.++|
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFTMPVKTSKAYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECSSSCEEEEEEEEEECCC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEEcCC
Confidence 99999999775556667788887765
No 307
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=1.9e-14 Score=100.85 Aligned_cols=101 Identities=20% Similarity=0.354 Sum_probs=79.2
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
....+|.|+..+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+. ....++.+..+.....+|.|.+++.
T Consensus 11 ~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~-~~~~-------~~~~~~~~~~~~~~~~~L~I~~v~~ 82 (116)
T 2kkq_A 11 EHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNN-EMVQ-------FNTDRISLYQDNTGRVTLLIKDVNK 82 (116)
T ss_dssp CCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETT-EECC-------CCBTTEEEEECTTCEEEEEEEEECG
T ss_pred CCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECC-EECc-------CCCCeEEEEeCCCCeEEEEECCCCc
Confidence 3456899999999999999999999999999888999999955 3221 1245666665554455899999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEEeCCc
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVVVPPR 125 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 125 (314)
+|+|.|+|.+.|. +.....+.|.|..+|.
T Consensus 83 ~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 83 KDAGWYTVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEECCSC
T ss_pred ccCEEEEEEEEcCCCeEEEEEEEEEeCCCC
Confidence 9999999999775 4455667788877664
No 308
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.59 E-value=1.7e-14 Score=111.57 Aligned_cols=114 Identities=14% Similarity=0.079 Sum_probs=81.6
Q ss_pred ceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCcee
Q psy15734 185 EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDG 264 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 264 (314)
..+.+|+++.|.|.+.|.|.|.+.|++..+..+ . .. .. .... ...|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~-~-~~--~~-~~~~---~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL-N-GK--VT-NEGT---TSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCC-S-SE--EE-EETT---EEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc-c-ce--EE-EcCC---ccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 345599999999999999999999998432211 1 11 11 1111 237999999999999999999999988888
Q ss_pred EEEEEEEecCCCeeEEE--EccccccEeEEEEEeeccCC---Cccce
Q psy15734 265 FIKVYVNLVDGDIFQIR--KMSRLHMGAYLCIASNGVVP---SVSHR 306 (314)
Q Consensus 265 ~~~l~V~~~~~~~~~~~--~~~~~~~g~~~C~a~~~~~~---~~~w~ 306 (314)
.+.|.|...|..+.... .+..++...++|.+.+.+++ .++|.
T Consensus 83 ~~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~ 129 (202)
T 1vca_A 83 GIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLL 129 (202)
T ss_dssp EEEEEEEBCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEE
T ss_pred EEEEEEEeCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEE
Confidence 89999988765433222 23344556799999987543 57884
No 309
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.59 E-value=1.1e-14 Score=113.20 Aligned_cols=125 Identities=12% Similarity=0.134 Sum_probs=93.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee---------c--CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII---------T--GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~---------~--~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
|..+..++....+.+|+++.|.|.+.+.|.+.+.|++++..... . ..++. ..+. .|.|.++
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~-----~L~i~~v 72 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT---FSSS-----GITFSSV 72 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEE---EETT-----EEEESCC
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEE---eece-----eEEEccc
Confidence 45677788888999999999999999999999999997554211 0 11111 1223 8999999
Q ss_pred CCCCCeEEEEEEeeCCC--CceeEEEEEEEecCCCeeEEE--EccccccEeEEEE-EeeccCCCccceE
Q psy15734 244 LSHQFGSYRCVAVNALG--ETDGFIKVYVNLVDGDIFQIR--KMSRLHMGAYLCI-ASNGVVPSVSHRI 307 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~C~-a~~~~~~~~~w~v 307 (314)
..+|+|.|+|.|.|..| .....+.|.|..+|....... .+..++...+.|. +.+.|.|.+.|..
T Consensus 73 ~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~ 141 (212)
T 1f97_A 73 TRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFK 141 (212)
T ss_dssp CGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEE
T ss_pred CcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEe
Confidence 99999999999999977 446677888877765433322 2344455679999 7889999999953
No 310
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.59 E-value=1.1e-14 Score=109.31 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=84.4
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecC-CceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFP-ASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p-~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
|.+...+....+.+|+++.|.|.+.+.| .+.+.|++++ ..+.... . .+.|.++..+|+|.|+|.
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g-~~~~~~~---------~-----~~~~~~~~~~d~G~Y~C~ 69 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNG-NLIPTHT---------Q-----PSYRFKANNNDSGEYTCQ 69 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETT-EECTTCC---------S-----SEEEEECCGGGCEEEEEE
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECC-eEcccCc---------c-----ceEEEecccccCeEEEEE
Confidence 5566667777899999999999999987 6799999964 3332221 1 567889999999999999
Q ss_pred EeeCCCCceeEEEEEEEe---------------------------------------------cCCCeeEEEEccccccE
Q psy15734 255 AVNALGETDGFIKVYVNL---------------------------------------------VDGDIFQIRKMSRLHMG 289 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~---------------------------------------------~~~~~~~~~~~~~~~~g 289 (314)
+.|...... +.|.|.. .....|.+..+...|.|
T Consensus 70 ~~~~~~s~~--~~l~v~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G 147 (170)
T 3ry4_A 70 TGQTSLSDP--VHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSG 147 (170)
T ss_dssp ETTSBCCCC--EEEEEECCSEEEECSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCE
T ss_pred EeCCCceEe--EEEEEECCceEecCCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCE
Confidence 998655444 3343321 11234555566677778
Q ss_pred eEEEEEeeccCCCccceEEEEEE
Q psy15734 290 AYLCIASNGVVPSVSHRIMVTVH 312 (314)
Q Consensus 290 ~~~C~a~~~~~~~~~w~v~l~v~ 312 (314)
.|+|.|.|..+...+-.+.|.|+
T Consensus 148 ~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 148 DYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEeCcCccccccEEEEEC
Confidence 88888887776556666776663
No 311
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.59 E-value=4e-15 Score=117.42 Aligned_cols=127 Identities=16% Similarity=0.206 Sum_probs=93.7
Q ss_pred CCeEEcCC----CcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceee--eEeeCCeeeEEEEEEeecCCCCC
Q psy15734 175 PPMLTIPN----QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYED--SRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 175 ~p~~~~~~----~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~--~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++++ ..+.....+.. ....+. .|.|.++..+|+
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~-----~L~i~~~~~~d~ 88 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG-KEFKQEHRIGGYKVRNQHW-----SLIMESVVPSDK 88 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETT-EECCGGGSTTCCEEEGGGT-----EEEECSCCGGGC
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECC-ccccccccccceeeecCcc-----eEEEecCCcccC
Confidence 45554444 6678999999999999999999999999974 43333322221 112222 899999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEecCCCeeEE-------EEccccccEeEEEEEeeccCCCccceE
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNLVDGDIFQI-------RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~-------~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|+|.|.|..|.....+.|.|...+.....+ ..+..++...+.|.+.+.|.|.+.|..
T Consensus 89 G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~ 154 (231)
T 3ojm_B 89 GNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIK 154 (231)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEE
T ss_pred EEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEE
Confidence 99999999999988888888887654321111 233345556799999999999999975
No 312
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.58 E-value=2.7e-15 Score=102.32 Aligned_cols=90 Identities=20% Similarity=0.310 Sum_probs=67.7
Q ss_pred CCeEEcCC----CcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee-ee-EeeCCeeeEEEEEEeecCCCCC
Q psy15734 175 PPMLTIPN----QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE-DS-RLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 175 ~p~~~~~~----~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~-~~-~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
||.|...+ ....+.+|+++.|.|.+.|.|.|.+.|++++. .+....... .. ...+. .|.|.++..+|+
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~-~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~D~ 77 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGK-EFKQEHRIGGYKVRNQHW-----SLIMESVVPSDK 77 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTE-ECCGGGSTTCCEEEGGGT-----EEEECSCCGGGC
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCE-EcccccccccEEEecCeE-----EEEEccCCcCCC
Confidence 35555433 45678899999999999999999999999744 333322221 11 11222 899999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEE
Q psy15734 249 GSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
|.|+|.|.|..|.....+.|.|
T Consensus 78 G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 78 GNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCEEEEEEEEEE
Confidence 9999999999999888888776
No 313
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.58 E-value=3e-14 Score=111.13 Aligned_cols=127 Identities=18% Similarity=0.203 Sum_probs=87.4
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC-Ce---eeec---------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK-GD---MIIT---------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~-~~---~~~~---------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+.+..++....+.+|+++.|.|.+.+.|.+.+.|++++ +. .+.. ..++.... .. ...+|.|.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~ 77 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG-SG---TDFTLTISD 77 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEECS
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec-CC---CEEEEEECC
Confidence 45666777888999999999999999999999999843 11 1111 12333321 11 234899999
Q ss_pred cCCCCCeEEEEEEeeCCCC---ceeEEEEEEEecC-CCeeEEEE----ccccccEeEEEEEee-ccCCCccce
Q psy15734 243 ILSHQFGSYRCVAVNALGE---TDGFIKVYVNLVD-GDIFQIRK----MSRLHMGAYLCIASN-GVVPSVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~-~~~~~~~~----~~~~~~g~~~C~a~~-~~~~~~~w~ 306 (314)
++.+|+|.|+|.|.|..+. ......|.|.... .+.+.+.. +..++...+.|.+.+ .|.|.+.|.
T Consensus 78 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~ 150 (213)
T 3nl4_L 78 LECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWE 150 (213)
T ss_dssp CCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEE
T ss_pred CChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEE
Confidence 9999999999999998773 2344566665532 23333322 123445679999999 788899995
No 314
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=1.4e-13 Score=108.45 Aligned_cols=86 Identities=16% Similarity=0.333 Sum_probs=59.9
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCC--ceEEEEEEcCc-e--eEEEeeeee--eecCcCEEEEeC-CceeEEEEEeeec
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLR--EYKVAWVKMIT-Q--TILSIHHKV--VTQNKRVSITFN-DHRSWFLHLRDVQ 95 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~~-~--~~~~~~~~~--~~~~~~~~~~~~-~~~~~~L~i~~~~ 95 (314)
+..++..+.+.+|++++|.|.+.+.+ ...+.|||... . ..+...... ....+|+.+..+ ....++|.|.+++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 44567788999999999999998543 46899998632 1 111111101 112468877654 3345689999999
Q ss_pred CCCCeEEEEEEecC
Q psy15734 96 ETDRGWYMCQINTV 109 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~ 109 (314)
.+|+|.|.|.+.+.
T Consensus 84 ~~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 84 ERDEGSYYCACDTL 97 (229)
T ss_dssp GGGCEEEEEEEECC
T ss_pred HhHCeEEEEEEecC
Confidence 99999999999653
No 315
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=115.07 Aligned_cols=120 Identities=15% Similarity=0.187 Sum_probs=89.4
Q ss_pred CCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCcee--eeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYE--DSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~--~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
+....+.+|+++.|.|.+.+.|.+.+.|++++.. +....... .....+. .|.|.+++.+|+|.|+|.+.|..
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~-~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~~~~~~ 95 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNGRE-FRGEHRIGGIKLRHQQW-----SLVMESVVPSDRGNYTCVVENKF 95 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETTEE-CCGGGSTTCCEEEGGGT-----EEEECSCCGGGCEEEEEEEEETT
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECCcc-cCCCCcccceeeeccce-----EEEEEeCCcccCEEEEEEEeecC
Confidence 3456789999999999999999999999997443 33322221 1112222 89999999999999999999999
Q ss_pred CCceeEEEEEEEecCCC-eeEE------EEccccccEeEEEEEeeccCCCccceE
Q psy15734 260 GETDGFIKVYVNLVDGD-IFQI------RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 260 g~~~~~~~l~V~~~~~~-~~~~------~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.....+.|.|...+.. +... ..+..++...+.|.+.+.+.|.+.|..
T Consensus 96 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~ 150 (241)
T 3grw_A 96 GSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLK 150 (241)
T ss_dssp EEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEE
T ss_pred CceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEE
Confidence 98888888888774332 2221 123345556799999999999999975
No 316
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.57 E-value=3.2e-15 Score=116.96 Aligned_cols=131 Identities=14% Similarity=0.196 Sum_probs=92.9
Q ss_pred CCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 174 VPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 174 ~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
.+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++.. +.... ..... ..++ .....|.|.+++.+|+|.|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~-~~~~~~~~~~~~-~~~~-~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEP-VSTNEKKSHRVQ-FKDG-ALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEE-CCCSSSSSSEEE-CTTS-CEEESSCCBSSSCBCCEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcC-ccCCCccceeEE-ecCC-ceEEEEEeccCCcccCceE
Confidence 378888888888999999999999999999999999997443 33322 11111 1222 1122447889999999999
Q ss_pred EEEEeeCCCCc-eeEEEEEEEecCCCeeE---EEEccccccEeEEEEE-eeccCCCccceE
Q psy15734 252 RCVAVNALGET-DGFIKVYVNLVDGDIFQ---IRKMSRLHMGAYLCIA-SNGVVPSVSHRI 307 (314)
Q Consensus 252 ~C~a~n~~g~~-~~~~~l~V~~~~~~~~~---~~~~~~~~~g~~~C~a-~~~~~~~~~w~v 307 (314)
+|.|.|..|.. ...+.|.|...+..... ...+..++...+.|.+ .+.|.|.+.|..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~ 145 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIK 145 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEE
T ss_pred EEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEE
Confidence 99999998865 34566666654332221 1234455667799999 889999999964
No 317
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.57 E-value=8.6e-15 Score=97.90 Aligned_cols=84 Identities=12% Similarity=0.201 Sum_probs=66.7
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
++.+...+....+.+|+++.|.|.+.|.|.|.+.|++++ ..+.... .. .|.|.++..+|+|.|+|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~-~~~~~~~--------~~-----~L~i~~v~~~d~G~Y~C~ 68 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE-LPLTHET--------KK-----LYMVPYVDLEHQGTYWCH 68 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETT-EECTTCC--------SS-----EEEESSCCGGGCEEEEEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCC-eeCCcCC--------CC-----eEEECCCCHHhCEEEEEE
Confidence 356777788888999999999999999999999999974 3332221 12 899999999999999999
Q ss_pred EeeCCCCce-eEEEEEEEe
Q psy15734 255 AVNALGETD-GFIKVYVNL 272 (314)
Q Consensus 255 a~n~~g~~~-~~~~l~V~~ 272 (314)
|.|..|... ..+.|.|..
T Consensus 69 a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 69 VYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp EECSSCEEECCCEEEEEC-
T ss_pred EEcCCCCEEeeeEEEEEeh
Confidence 999999654 556676643
No 318
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.56 E-value=1e-14 Score=95.47 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=62.4
Q ss_pred CcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 183 QLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
..+.+.+|+++.|.|.+.+ |.|.+.|+++ +..+..+.++.+....+ ...|.|.++..+|+|.|+|.|. ..
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~-g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~----n~ 73 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKD-GERLASQGRVQLEQAGA----RQVLRVQGARSGDAGEYLCDAP----QD 73 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEET-TEECCCCSSEEEEECSS----CEEEEESSCSSTTCEEEEEECT----TT
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEEC-CEEccccccEEEeecCC----eEEEEecCCCCcccEEEEEEEC----CE
Confidence 4567889999999999976 9999999996 55565666666544322 2489999999999999999984 45
Q ss_pred eeEEEEEEEe
Q psy15734 263 DGFIKVYVNL 272 (314)
Q Consensus 263 ~~~~~l~V~~ 272 (314)
..++.|.|..
T Consensus 74 ~~~a~l~V~e 83 (84)
T 2lu7_A 74 SRIFLVSVEE 83 (84)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEEEC
Confidence 6777777754
No 319
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.56 E-value=3.9e-14 Score=97.87 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=70.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecC-------CceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG-------DDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
.+...+....+.+|+++.|.|.+.+.|.+.+.|++++...+... .++.+..... ....|.|.+++.+|+|
T Consensus 8 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 8 GQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASW---HELSISVSDVSLSDEG 84 (108)
T ss_dssp CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESS---SEEEEEECSCCGGGCE
T ss_pred CccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCC---CcEEEEECCCChhHCe
Confidence 34445667789999999999999999999999999755222221 1333222211 2458999999999999
Q ss_pred EEEEEEeeCCCCceeEEEEEEEecC
Q psy15734 250 SYRCVAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~~~~~l~V~~~~ 274 (314)
.|+|.|.| .+.....+.|.|..+|
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECCC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 99999999 8888888888887653
No 320
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=99.66 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=73.3
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|..++....+.+|+++.|.|.+.+ |.+.+.|++++ ..+....++.+..... .+.|.|.++..+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g-~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDR-KAIRKSQKYDVVCEGT----MAMLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESS-CBCCCSSSEEEEEETT----EEEEEESSCCTTTCSEEEEE
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECC-EEccCCCCEEEEECCC----EEEEEECCCCcccCEEEEEE
Confidence 677888888889999999999999998 88899999974 4444445554443221 35899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCCe
Q psy15734 255 AVNALGETDGFIKVYVNLVDGDI 277 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~~ 277 (314)
|.| ....+.|.|..+|.++
T Consensus 82 a~n----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 82 VEA----SKSTASLHVEEKASGP 100 (103)
T ss_dssp CSS----CEEEEEEEECCCSSSS
T ss_pred Ecc----CCcEEEEEEeCCCCCC
Confidence 999 4678888888776543
No 321
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.56 E-value=2.7e-14 Score=111.84 Aligned_cols=119 Identities=16% Similarity=0.222 Sum_probs=90.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
.+.|...+....+.+|+++.|.|.+.+.|.+.+.|++++.. +... .+. .|.|.++..+|+|.|+|.
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~-~~~~--------~~~-----~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKE-IPNG--------NTS-----ELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEE-CTTC--------CSS-----EEEETTCCGGGCEEEEEE
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEE-CCCC--------CCC-----EEEEccCChhhCeEeEEE
Confidence 56777788888999999999999999999999999997443 2221 122 899999999999999999
Q ss_pred EeeCCCCc-eeEEEEEEEecCC-------------CeeEE----EEccccccEeEEEEEeeccCCCccceE
Q psy15734 255 AVNALGET-DGFIKVYVNLVDG-------------DIFQI----RKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 255 a~n~~g~~-~~~~~l~V~~~~~-------------~~~~~----~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|..|.. +..+.|.|...+. +.+.. ..+..++...+.|.+.+.|.+.+.|..
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~ 154 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFK 154 (218)
T ss_dssp EECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEE
T ss_pred EEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEE
Confidence 99998755 5567777776531 22222 133445556799999999999999953
No 322
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.56 E-value=6.7e-14 Score=106.96 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=59.2
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+.. .+.+|++++|.|.+.+. .+.+.|++++............ .. ....|.|.+++.+|+|.|+|.
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~-~~-----~~~~L~I~~v~~~D~G~Y~C~ 75 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPE-RI-----NKVKFYIPDMNSRMAGQYSCI 75 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCT-TC-----CEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCC-Cc-----ceeEEEeCcCCcccCeEEEEE
Confidence 4666665555 78999999999999764 4688999975443321111100 01 124899999999999999999
Q ss_pred EeeCCCC--ceeEEEEEE
Q psy15734 255 AVNALGE--TDGFIKVYV 270 (314)
Q Consensus 255 a~n~~g~--~~~~~~l~V 270 (314)
+.|..+. .+..+.|.|
T Consensus 76 ~~~~~~~~~~s~~~~l~V 93 (188)
T 1oll_A 76 YRVGELWSEPSNLLDLVV 93 (188)
T ss_dssp EEETTEECCCCCCEEEEE
T ss_pred ecCCCCCCCCCCceEEEe
Confidence 9986542 234455544
No 323
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.55 E-value=3.1e-14 Score=111.71 Aligned_cols=127 Identities=19% Similarity=0.169 Sum_probs=87.5
Q ss_pred cCCCcceeecCccEEEEEEEeecCC-----ceeEEecCCCeeeecCC----------c--eeeeEeeCC-eeeEEEEEEe
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAFPA-----SLNYWTNEKGDMIITGD----------D--YEDSRLING-YSCHMTLKIR 241 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~p~-----p~~~W~~~~~~~~~~~~----------~--~~~~~~~~~-~~~~s~L~i~ 241 (314)
.++..+.+.+|+++.|.|.+.+.|. +.+.|++++........ . -+.....+. .....+|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3556678899999999999988874 38999997422111000 0 011111110 0123489999
Q ss_pred ecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEE--EccccccEeEEEEEeeccCCCccceE
Q psy15734 242 SILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIR--KMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~--~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
+++.+|+|.|+|.|.| .|.....+.|.|..++..+.... .+..++...+.|.|.+.|.|.+.|..
T Consensus 86 ~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~ 152 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTS 152 (222)
T ss_dssp SCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEE
T ss_pred CcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEE
Confidence 9999999999999999 66677888888887654433222 44555667899999999999999964
No 324
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=2.5e-14 Score=98.00 Aligned_cols=91 Identities=21% Similarity=0.264 Sum_probs=69.2
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+.|...+....+.+|+++.|.|.+.+ |.+.+.|++++ ..+.... ++.+..... ...|.|.+++.+|+|.|+|
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g-~~l~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C 81 (103)
T 1x44_A 8 IMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNG-EEIIPGPKSRYRIRVEGK----KHILIIEGATKADAAEYSV 81 (103)
T ss_dssp CCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETT-EECCCSTTCSEEEEEETT----EEEEEEEEECTTTCSEEEE
T ss_pred ceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECC-EECCCCCceEEEEEEcCC----EEEEEECCCCcccCEEEEE
Confidence 34666777788999999999999988 77999999974 4444444 344432211 2489999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecCCC
Q psy15734 254 VAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.|.| ....+.|.|...+.+
T Consensus 82 ~a~n----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp EETT----EEEEEEEEEECCCSC
T ss_pred EECC----CcEEEEEEEeCCCCC
Confidence 9987 567788888877644
No 325
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.55 E-value=6.9e-14 Score=109.02 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=86.2
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC--Cee--ee---------cCCceeeeEeeCCeeeEEEEEEee
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK--GDM--II---------TGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~--~~~--~~---------~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+.+..++ ...+.+|+++.|.|.+.+.|.+.+.|++.+ +.. +. ...++.... .. ....|.|.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~ 76 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN-SG---NMATLTISK 76 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ET---TEEEEEESS
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe-cC---CEEEEEECC
Confidence 4455666 788999999999999999999999999832 111 11 112332222 11 235899999
Q ss_pred cCCCCCeEEEEEEeeCCC---CceeEEEEEEEecC--CCeeEEEEc----cccccEeEEEEEeeccCC--Cccce
Q psy15734 243 ILSHQFGSYRCVAVNALG---ETDGFIKVYVNLVD--GDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g---~~~~~~~l~V~~~~--~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
++.+|+|.|+|.|.|..+ .....+.|.|...+ .+.+.+... ..++...+.|.+.+.+++ .+.|.
T Consensus 77 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 151 (213)
T 3mj8_L 77 AQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWE 151 (213)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEE
Confidence 999999999999999988 34566777777432 233333221 134556799999996443 88895
No 326
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.55 E-value=6.2e-14 Score=93.85 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=68.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|..++..+.+.+|+++.|.|.+.+ +.+.+.|++++ ..+ ..+.++.+..++.. ..|.|.+++.+|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g-~~i--------~~~~~~~i~~~g~~-~~L~I~~v~~~D 71 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKG-QPL--------AASPDCEIIEDGKK-HILILHNCQLGM 71 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETT-EEC--------CCBTTEEEEEETTE-EEEEECSCCGGG
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECC-EEC--------cCCCCEEEEEECCE-EEEEECCCChhh
Confidence 46789999999999999999999999976 45789999954 332 23456666554332 379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEe
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVV 122 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~ 122 (314)
+|.|+|.+.| ......|.|.+
T Consensus 72 ~G~Y~C~a~n---~~~sa~L~V~~ 92 (93)
T 1waa_A 72 TGEVSFQAAN---TKSAANLKVKE 92 (93)
T ss_dssp CEEEEEEETT---EEEEEEEEEEC
T ss_pred CEEEEEEECC---CcEEEEEEEEc
Confidence 9999999965 23455666654
No 327
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.55 E-value=1.5e-14 Score=109.32 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=81.3
Q ss_pred ceeecCccEEEEEEEee--cCCceeEEecCCCeee---------ecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 185 EGAFVSQTVELHCHTEA--FPASLNYWTNEKGDMI---------ITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g--~p~p~~~W~~~~~~~~---------~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+.+.+|+++.|.|...+ .|.+.+.|++++..+. ....++.+ ..++ +|.|.+++.+|+|.|+|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~--~~~g-----sL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEI--LANG-----DLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEE--CTTS-----CEEESSCCGGGCEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEE--CCCC-----cEEEcccccccCEEEEE
Confidence 46789999999995433 6678999999754322 11222222 3444 79999999999999999
Q ss_pred EEeeCCCCc--eeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 254 VAVNALGET--DGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 254 ~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|.|..|.. ...+.|.|...+..+..... .....+.|.+.+.|+|.+.|..
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~~~~~p~i~~~---~~~v~L~C~~~g~p~p~i~W~~ 131 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILEMVSKPMIYWE---CSNATLTCEVLEGTDVELKLYQ 131 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEECCCCCCEEEEE---TTTTEEEEECSSCSSCEEEEEE
T ss_pred EEEeCCCCEEEEEEEEEEEeCCCCCCEEEec---CCcEEEEEEecCCCCcEEEEEE
Confidence 999999986 67788888775443332221 1225799999999999999963
No 328
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.9e-14 Score=100.27 Aligned_cols=110 Identities=21% Similarity=0.240 Sum_probs=81.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++. .+ ...+.++.+..++ .|.|.+++.+|
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~-~~-------~~~~~~~~~~~~~----~L~i~~v~~~D 73 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGV-LV-------STQDSRIKQLENG----VLQIRYAKLGD 73 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSS-BC-------CTTSTTEEEEETT----EEEEESCCGGG
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCE-EC-------cCCCCeEEEccCC----EEEEccCCcCC
Confidence 457888888999999999999999999998889999999543 22 1134455554433 79999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCceeeecCcceeEEecC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREG 140 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g 140 (314)
+|.|+|.+.|. +.....+.|.|..++.......+.+..+.+|
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~p~~~~~~~~~~~~~G 116 (118)
T 2eo9_A 74 TGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPS 116 (118)
T ss_dssp CCCEEEEEECSSCEEEEECCEEEECCSCCCCCCCCCCCCCCCC
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEeCCCCccCCCCCCCccCCC
Confidence 99999999775 4455566788887765443333444444444
No 329
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.55 E-value=2.3e-14 Score=110.53 Aligned_cols=83 Identities=19% Similarity=0.225 Sum_probs=61.9
Q ss_pred CeEEcCCCcceeecCccEEEEEE-EeecCC-ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCH-TEAFPA-SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~-~~g~p~-p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+....++....+.+|+++.|.|. +.+.|. +.+.|++++................++ .|.|.++..+|+|.|+|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C 83 (201)
T 3s97_C 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG-----NLYIANVEASDKGNYSC 83 (201)
T ss_dssp CCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTC-----CEEESSCCGGGCEEEEE
T ss_pred ccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCC-----eEEECcCCcccCeEEEE
Confidence 33344557778999999999999 899999 999999986554332222222222333 89999999999999999
Q ss_pred EEeeCCCCce
Q psy15734 254 VAVNALGETD 263 (314)
Q Consensus 254 ~a~n~~g~~~ 263 (314)
.+.|..+...
T Consensus 84 ~~~~~~~~~~ 93 (201)
T 3s97_C 84 FVSSPSITKS 93 (201)
T ss_dssp EEEEGGGTEE
T ss_pred EEEecCCCcc
Confidence 9999765543
No 330
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.55 E-value=4.1e-14 Score=100.40 Aligned_cols=96 Identities=19% Similarity=0.225 Sum_probs=71.5
Q ss_pred EcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee-------cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 179 TIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII-------TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 179 ~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~-------~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
...+....+.+|+++.|.|.+.+.|.+.+.|+++++..+. ...++.+..... ...+|.|.+++.+|+|.|
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~L~I~~v~~~DsG~Y 81 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSA---NQLSITVPNVTLQDEGVY 81 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEET---TEEEEEESSCCGGGCEEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCC---CEEEEEECCCChHHCEEE
Confidence 3445667899999999999999999999999987665443 233333322111 135999999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEEecCCCee
Q psy15734 252 RCVAVNALGETDGFIKVYVNLVDGDIF 278 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~~~~~~ 278 (314)
+|.|.|. |.....+.|.|...|...+
T Consensus 82 ~C~a~n~-g~~~~~~~l~V~~~P~~~~ 107 (124)
T 3rbg_A 82 KCLHYSD-SVSTKEVKVIVLATMKGEF 107 (124)
T ss_dssp EEEEESS-SEEEEEEEEEEECC-----
T ss_pred EEEEEcC-CCCcEEEEEEEEeCCCCCc
Confidence 9999999 8889999999988775443
No 331
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=3e-14 Score=96.83 Aligned_cols=94 Identities=21% Similarity=0.276 Sum_probs=70.1
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+....+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ..+.++.+.........|.|.+++.+|+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g-~~~--------~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 74 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNG-VKI--------ERSDRIYWYWPEDNVCELVIRDVTGEDS 74 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT-EEC--------CCCSSEEEEEEETTEEEEEECSCCGGGC
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECC-EEC--------CCCCCEEEEEcCCCEEEEEECCCCcCCC
Confidence 4688888899999999999999999999888999999954 322 2233444332222344799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEe
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVV 122 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~ 122 (314)
|.|+|.+.|. +.....+.|.|..
T Consensus 75 G~Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 75 ASIMVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCcEEEEEEEEEec
Confidence 9999999775 4444555666643
No 332
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.55 E-value=3.6e-14 Score=100.73 Aligned_cols=116 Identities=15% Similarity=0.201 Sum_probs=74.5
Q ss_pred eecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEE
Q psy15734 24 FAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYM 103 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 103 (314)
+...+..+.+.+|++++|.|.+.+.+.+.+.|++.++..+... ......+.++.+.......++|.|.+++.+|+|.|+
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 82 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLN-EYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYK 82 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEET-TEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEe-ccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEE
Confidence 4556778999999999999999988889999998655433221 111234556666543334568999999999999999
Q ss_pred EEEecCCCcceeEEEEEEeCCceeeecCcceeEEecC
Q psy15734 104 CQINTVPMTSQKGYLQVVVPPRILLDRTSTDVVVREG 140 (314)
Q Consensus 104 C~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g 140 (314)
|.+.+.+.....+.|.|..+|.......|......+|
T Consensus 83 C~a~n~g~~~~~~~l~V~~~P~~~~~~~P~~~~~~~~ 119 (124)
T 3rbg_A 83 CLHYSDSVSTKEVKVIVLATMKGEFCRYPSHWRPLEH 119 (124)
T ss_dssp EEEESSSEEEEEEEEEEECC-----------------
T ss_pred EEEEcCCCCcEEEEEEEEeCCCCCcccccCccccccc
Confidence 9997765566777888888886544333343333333
No 333
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.54 E-value=8e-14 Score=98.62 Aligned_cols=93 Identities=17% Similarity=0.106 Sum_probs=67.4
Q ss_pred CCCcceeecCccEEEEEEEeecC--CceeEEecCCCeeee----cCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKGDMII----TGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~~~~~----~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
++....+.+|+++.|.|.+.|.| .+.+.|++++..... ..... ...........++|.|.+++.+|+|.|+|.
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 92 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLK-TQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 92 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCC-EEEETTEEEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccc-cccCCceeeEEEEEEECCCCcccCEEEEEE
Confidence 44555789999999999999944 568899997653211 11111 101111122345899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecC
Q psy15734 255 AVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~ 274 (314)
|.|..|.....+.|.|..+|
T Consensus 93 a~n~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 93 ASSGLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp EECSSCEEEEEEEEEEEEEE
T ss_pred EccCCCceEEEEEEEEeccC
Confidence 99999999999999998774
No 334
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=6.4e-14 Score=97.18 Aligned_cols=99 Identities=20% Similarity=0.190 Sum_probs=76.5
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. + .....++.+.........|.|.+++.+|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~-~-------~~~~~~~~~~~~~~~~~~L~i~~v~~~D 77 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQ-I-------SPKSDHYTIQRDLDGTCSLHTTASTLDD 77 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCB-C-------CTTCSSEEEEECTTCEEEEEESSCCTTT
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEE-C-------CCCCCeEEEEECCCcEEEEEECCCChhh
Confidence 4678888888999999999999999999988899999995432 2 1123456665543444579999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.|. +.....+.|.|..+|.
T Consensus 78 ~G~Y~C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 78 DGNYTIMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp CSCCEEEEECTTCCEEECCCEEEECCSC
T ss_pred CEEEEEEEEECCCeEEEEEEEEEECCCC
Confidence 99999999775 5556666788876553
No 335
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.54 E-value=1.3e-15 Score=108.02 Aligned_cols=98 Identities=20% Similarity=0.359 Sum_probs=75.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCce-eEEecCCCeeee-cCCceeeeEeeCCeeeEEEEEEeecCCCCC-eEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASL-NYWTNEKGDMII-TGDDYEDSRLINGYSCHMTLKIRSILSHQF-GSY 251 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~-~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~-G~Y 251 (314)
+|.|.. +....+.+|+++.|.|.+.|.|.|. +.|++++..+.. ...++.+..........+.|.|.++..+|+ |.|
T Consensus 14 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y 92 (122)
T 2cry_A 14 PPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIY 92 (122)
T ss_dssp SCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCE
T ss_pred CCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceE
Confidence 666666 6777899999999999999999997 999997544332 134444432222222346999999999999 999
Q ss_pred EEEEeeCCCCceeEEEEEEEec
Q psy15734 252 RCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
+|.|.|..|.....+.|.|...
T Consensus 93 ~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 93 NCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp EEEEECSSCEEEEEECCCCSCS
T ss_pred EEEEECCCCeEEEEEEEEECCC
Confidence 9999999999998888887654
No 336
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.7e-13 Score=106.96 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=83.5
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+|.|. .+....+.+|+.+.|.|.+.|.|.|.+.|++++ ..+.... ++.+..... .+.|.|.++..+|+|.|+
T Consensus 19 ~P~~~-~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g-~~l~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~Y~ 92 (215)
T 3mtr_A 19 APKLQ-GPVAVYTWEGNQVNITCEVFAYPSATISWFRDG-QLLPSSNYSNIKIYNTPS----ASYLEVTPDSENDFGNYN 92 (215)
T ss_dssp EEEEE-CCSEEEECTTCCEEEEEEEEEESCCEEEEEETT-EESSCSSSCSEEEEEETT----EEEEEECCCSGGGCEEEE
T ss_pred CCccc-CCceEEEECCCCEEEEEEEeecCCCEEEEEECC-eECCCCCCccEEEecCCC----eeEEEEecCChhhCeEEE
Confidence 56663 455578899999999999999999999999974 4443332 222221111 359999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEE
Q psy15734 253 CVAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCI 294 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~ 294 (314)
|.|.|..|.....+.|.|..+|..+..+..........+.|.
T Consensus 93 C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~~~~l~w~ 134 (215)
T 3mtr_A 93 CTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSSTAQVQFD 134 (215)
T ss_dssp EEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETTEEEEEEE
T ss_pred EEEEECCCceEEEEEEEECCCCCCCcceEEEEecceEEEEEe
Confidence 999999999999999999888776654433222333456665
No 337
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=1.8e-14 Score=95.85 Aligned_cols=86 Identities=20% Similarity=0.280 Sum_probs=63.1
Q ss_pred CCeEEcCCCcce--eecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEG--AFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~--v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
|+.|..+..... +.+|+++.|.|.+.+ |.|.+.|+++ +..+..+.++.+....+ ..+|.|.++..+|+|.|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~-g~~i~~~~~~~i~~~~~----~~~L~I~~v~~~D~G~Y~ 77 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKD-GQEVEESDFVVLENEGP----HRRLVLPATQPSDGGEFQ 77 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEET-TSCCCCCSSCEEEEETT----EEEEEESSCCGGGCSEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEEC-CEEeeeeeeeeEEecCC----eEEEEeCCCChhhcEEEE
Confidence 566666665544 468999999999976 8899999997 45555566666543322 248999999999999999
Q ss_pred EEEeeCCCCceeEEEEEE
Q psy15734 253 CVAVNALGETDGFIKVYV 270 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V 270 (314)
|.|.| .+.++.|.|
T Consensus 78 C~a~n----~~~~~~ltV 91 (91)
T 2lvc_A 78 CVAGD----ECAYFTVTI 91 (91)
T ss_dssp EECSS----CEEEEEEEC
T ss_pred EEEcc----eEEEEEEEC
Confidence 99865 455555543
No 338
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.54 E-value=2.6e-14 Score=112.02 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=86.9
Q ss_pred CcceeecCccEEEEEEEeecCCce---eEEecCCCeeeecCC---------------ceeee---EeeCCeeeEEEEEEe
Q psy15734 183 QLEGAFVSQTVELHCHTEAFPASL---NYWTNEKGDMIITGD---------------DYEDS---RLINGYSCHMTLKIR 241 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p~p~---~~W~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~s~L~i~ 241 (314)
..+.+.+|++++|.|.+.+.|.+. +.|+|+++....... +.... ..........+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 346788999999999999988764 789998655432100 00000 000001112379999
Q ss_pred ecCCCCCeEEEEEEeeCCCCceeE-EEEEEEe------------------------------------------------
Q psy15734 242 SILSHQFGSYRCVAVNALGETDGF-IKVYVNL------------------------------------------------ 272 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~------------------------------------------------ 272 (314)
+++.+|+|.|+|.|.|..+..... ..+.+..
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~ 168 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQ 168 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEE
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcc
Confidence 999999999999999987755433 2232210
Q ss_pred ---cCCC------eeEEEEccccccEeEEEEEeeccCC-CccceEEEEEEe
Q psy15734 273 ---VDGD------IFQIRKMSRLHMGAYLCIASNGVVP-SVSHRIMVTVHC 313 (314)
Q Consensus 273 ---~~~~------~~~~~~~~~~~~g~~~C~a~~~~~~-~~~w~v~l~v~~ 313 (314)
.... .|.+..+...+.|.|+|.|.|.... .++..++|.|+|
T Consensus 169 ~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 169 EPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp EECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred eEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 0011 2666777888899999999997644 567889999887
No 339
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.54 E-value=2.8e-14 Score=97.16 Aligned_cols=96 Identities=20% Similarity=0.243 Sum_probs=69.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ...+............|.|.+++.+|
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g-~~~~--------~~~~~~~~~~~~~~~~L~i~~v~~~D 73 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNG-RTVQ--------SDDLHKMIVSEKGLHSLIFEVVRASD 73 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETT-EEEC--------CCSSSCEEEETTTEEEEEESSCCGGG
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECC-EECc--------CCCcEEEEEcCCCeEEEEECCCCccc
Confidence 34678888888999999999999999998888999999954 3322 11111111112223479999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVP 123 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~ 123 (314)
+|.|+|.+.|. +.....+.|.|..+
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 74 AGAYACVAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEcCCCeEEEEEEEEEEec
Confidence 99999999775 44455666776653
No 340
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.54 E-value=2.8e-14 Score=110.78 Aligned_cols=128 Identities=21% Similarity=0.259 Sum_probs=84.9
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCee----ee----------cCCce--eeeEeeCCeeeEEEEEEeecC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDM----II----------TGDDY--EDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~----~~----------~~~~~--~~~~~~~~~~~~s~L~i~~~~ 244 (314)
.+....+.+|+++.|.|.+.+.|.+.+.|++++... +. ....+ +.....++ +|.|.+++
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~-----~L~i~~v~ 79 (208)
T 3r4d_A 5 EAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG-----SLLFQMIT 79 (208)
T ss_dssp EEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTS-----CEEECSCC
T ss_pred cCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCC-----eEEEcccc
Confidence 344467899999999999999999999999864211 00 00000 11122233 79999999
Q ss_pred CCCCeEEEEEEeeCC-CCceeEEEEEEEecC-------------------------------------------------
Q psy15734 245 SHQFGSYRCVAVNAL-GETDGFIKVYVNLVD------------------------------------------------- 274 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~------------------------------------------------- 274 (314)
.+|+|.|+|.+.|.. +.....+.|.|...+
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~pp~i~W~~~g~~l~~~~~~~~~ 159 (208)
T 3r4d_A 80 MKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLS 159 (208)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCTTCEEEEEETTEECCCCSSEEEE
T ss_pred ccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCCCCceEEEECCEeCCCCCCeEEc
Confidence 999999999999985 455666677664321
Q ss_pred --CCeeEEEEccccccEeEEEEEeeccCCCccceEEEEEEe
Q psy15734 275 --GDIFQIRKMSRLHMGAYLCIASNGVVPSVSHRIMVTVHC 313 (314)
Q Consensus 275 --~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v~l~v~~ 313 (314)
+..|.+..+...|.|.|+|.|.|..+...+-.++|.|++
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~ 200 (208)
T 3r4d_A 160 QNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIF 200 (208)
T ss_dssp TTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-
T ss_pred CCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEe
Confidence 133445555566666777777776666666666666654
No 341
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.54 E-value=1.4e-14 Score=112.50 Aligned_cols=129 Identities=9% Similarity=0.041 Sum_probs=81.4
Q ss_pred EEcCCCcce-eecCccEEEEEEEeecC---C-ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 178 LTIPNQLEG-AFVSQTVELHCHTEAFP---A-SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 178 ~~~~~~~~~-v~~g~~~~l~C~~~g~p---~-p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+..++.... +.+|+++.|.|.+.|.| . +.+.|+++++...............+.|...+.|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344555544 88999999999999985 2 489999986432211000011111222455668999999999999999
Q ss_pred EEEeeCCCCcee--EEEEEEEecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 253 CVAVNALGETDG--FIKVYVNLVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 253 C~a~n~~g~~~~--~~~l~V~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
|.|.|..+.... .+.+.+.....+.+.+.... .++...+.|.|.+++++ .+.|.
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWE 146 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEE
Confidence 999999886533 33321122223444433222 23445799999996554 78885
No 342
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.53 E-value=1.5e-14 Score=110.46 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=48.8
Q ss_pred eeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEee-cCCCCCeEEEEEEeeCCCCcee
Q psy15734 186 GAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRS-ILSHQFGSYRCVAVNALGETDG 264 (314)
Q Consensus 186 ~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~ 264 (314)
.+..|+++.|.|.+.+ |+ .+.|++++ ..+... .++ +|.|.+ +..+|+|.|+|.|.|..|....
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g-~~l~~~--------~~~-----~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~ 73 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNG-QELPQK--------HDK-----HLVLQDFSEVEDSGYYVCYTPASNKNTYL 73 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETT-EEECSC--------CCS-----EEEEESCCTTTSCEEEEEECSSCCCCCCE
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECC-EECCCC--------CCC-----EEEECCCCccccCEEEEEEEEeCCCcEEE
Confidence 3467999999999988 44 49999974 433221 122 899999 9999999999999998876433
No 343
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.53 E-value=5.7e-14 Score=96.19 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=73.0
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
+..+|.|..++..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ ..+.++.+...+. ...|.|.+++.+
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~-~~~--------~~~~~~~~~~~~~-~~~L~i~~~~~~ 74 (103)
T 3qp3_A 5 LDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNG-VEL--------QESSKIHYTNTSG-VLTLEILDCHTD 74 (103)
T ss_dssp TCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETT-EEC--------CCCSSEEEEEETT-EEEEEECSCCGG
T ss_pred CCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECC-EEC--------CCCCCEEEEECCC-EEEEEEcCCCcc
Confidence 345788888999999999999999999999899999999954 322 2234555544322 237999999999
Q ss_pred CCeEEEEEEecC-CCcceeEEEEEEeC
Q psy15734 98 DRGWYMCQINTV-PMTSQKGYLQVVVP 123 (314)
Q Consensus 98 d~G~Y~C~~~~~-~~~~~~~~l~v~~~ 123 (314)
|+|.|+|.+.|. +.....+.|.|...
T Consensus 75 D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 75 DSGTYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEECC
Confidence 999999999775 44555667777643
No 344
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.53 E-value=1.5e-14 Score=111.63 Aligned_cols=123 Identities=15% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+. ..+.+|++++|.|.+.+.|. .+.|++++......... ......+. .|.|.++..+|+|.|+|.
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~-----~L~i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRI-PQELVKKG-----QFPIPSITWEHTGRYRCY 76 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTS-CHHHHTTT-----EEEESSCCGGGCEEEEEE
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccc-cccCCccc-----EEEECCCCHHHCeEEEEE
Confidence 566666555 37899999999999999876 69999975433211111 00112233 899999999999999999
Q ss_pred EeeCC-C--CceeEEEEEEEecC-CCeeEEE---EccccccEeEEEEEeeccCCCccce
Q psy15734 255 AVNAL-G--ETDGFIKVYVNLVD-GDIFQIR---KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 255 a~n~~-g--~~~~~~~l~V~~~~-~~~~~~~---~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|.. | ..+..+.|.|...+ .+.+... .+..++...+.|.+.+. ++.+.|.
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~-~~~v~W~ 134 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDSQVA-FDGFILC 134 (198)
T ss_dssp EEETTTEECCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEECSSC-CSEEEEE
T ss_pred EECCCCCcccCCccEEEEEcccccCCccccCCccccCCCCcEEEEEecCCC-CcEEEEE
Confidence 99987 5 44667888888733 3444432 23455556799999988 7888884
No 345
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.53 E-value=1.6e-14 Score=111.22 Aligned_cols=123 Identities=11% Similarity=0.029 Sum_probs=81.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+.. .+.+|++++|.|.+.+.|. .+.|++++.......... .... ....|.|.+++.+|+|.|+|.
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~-~~~~-----~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 2d3v_A 5 KATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNP-LEPK-----NKARFSIPSMTEHHAGRYRCY 76 (196)
T ss_dssp BCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECC-CSST-----TEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccc-cCCc-----cccEEEeccCChhHCeEEEEE
Confidence 4666665553 7899999999999998876 899999754332110000 0001 124899999999999999999
Q ss_pred EeeCCCCc--eeEEEEEEEecC-CCeeEEE---EccccccEeEEEEEeeccCCCccce
Q psy15734 255 AVNALGET--DGFIKVYVNLVD-GDIFQIR---KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 255 a~n~~g~~--~~~~~l~V~~~~-~~~~~~~---~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|..|.. +..+.|.|.... .+.+... .+..++...+.|.+.+.+ +.+.|.
T Consensus 77 a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~~~p-~~~~W~ 133 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTLQCGSRLRF-DRFILT 133 (196)
T ss_dssp EEETTEECBCCCCEEEEEECSSCCCEEEC-----------CEEEEEESSCC-SEEEEE
T ss_pred EeCCCCcCCcCccEEEEecCCCCCCeEEccCCccccCCCcEEEEEEcCCCC-CEEEEE
Confidence 99987643 456778887643 3333332 234445556999999988 888885
No 346
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.53 E-value=8e-14 Score=108.18 Aligned_cols=118 Identities=12% Similarity=0.064 Sum_probs=83.0
Q ss_pred cceeecCccEEEEEEEee-cCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 184 LEGAFVSQTVELHCHTEA-FPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~~g-~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
...+.+|+.+.|.|.+.+ .|.|.+.|+++ +..+..+.++.+...... ....|.|.++..+|+|.|+|.|.| |..
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~--g~~~L~I~~v~~~D~G~Y~C~a~N--g~a 85 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNT--GIIEMFMEKLQDEDEGTYTFQLQD--GKA 85 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEET-TEEECSSSSCEEEECTTT--CEEEEEESCCCGGGCEEEEEEEEE--TTE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEEC-CEECccCCCEEEEEeCCC--CEEEEEECCCChhhCEEEEEEEEC--CCe
Confidence 467889999999999964 79999999997 555555666655442211 234799999999999999999999 555
Q ss_pred eeEEEEEEEe-------------------cCCCeeEE---EEccccccEeEEEEEeec-cCCCccce
Q psy15734 263 DGFIKVYVNL-------------------VDGDIFQI---RKMSRLHMGAYLCIASNG-VVPSVSHR 306 (314)
Q Consensus 263 ~~~~~l~V~~-------------------~~~~~~~~---~~~~~~~~g~~~C~a~~~-~~~~~~w~ 306 (314)
.....+.+.. ...+.+.. ..+..++...+.|.+.+. |.|.+.|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~ 152 (207)
T 3rbs_A 86 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWY 152 (207)
T ss_dssp EEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEE
T ss_pred EEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEE
Confidence 4444432210 01232221 234455556799999998 89999995
No 347
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.52 E-value=1.7e-13 Score=105.28 Aligned_cols=110 Identities=13% Similarity=0.106 Sum_probs=81.1
Q ss_pred ceeecCccEEEEEEEeecCCc--eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 185 EGAFVSQTVELHCHTEAFPAS--LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g~p~p--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
+.+..|++++|.|.+ +.|.| .|.|++.+... .+... . . ....|.|.+++.+|+|.|.|.|.|..+..
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l----~~~~~--~-~---~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~ 85 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL----GAVQS--D-T---GRSVLTVRNASLSAAGTRVCVGSCGGRTF 85 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT----CCEEE--E-S---SEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc----CcEEe--c-C---CccEEEECccCcccCceEEEEEEeCCCce
Confidence 688999999999999 99888 99999865332 11111 1 1 13489999999999999999999999888
Q ss_pred eeEEEEEEEecCCCeeEEE-EccccccEeEEEEEeeccC-C----Cccce
Q psy15734 263 DGFIKVYVNLVDGDIFQIR-KMSRLHMGAYLCIASNGVV-P----SVSHR 306 (314)
Q Consensus 263 ~~~~~l~V~~~~~~~~~~~-~~~~~~~g~~~C~a~~~~~-~----~~~w~ 306 (314)
.+.+.|.|..+|....... .....+.. ++|.|.+.+| + +|.|.
T Consensus 86 ~~~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wl 134 (210)
T 1gsm_A 86 QHTVQLLVYAFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLL 134 (210)
T ss_dssp EEEEEEEEEBCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEE
T ss_pred EEEEEEEEEecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEE
Confidence 8899999998764333221 22233445 9999999743 2 57773
No 348
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.52 E-value=6.7e-15 Score=123.72 Aligned_cols=123 Identities=18% Similarity=0.166 Sum_probs=96.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCe-EEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFG-SYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G-~Y~C 253 (314)
+|.+...+....+.+|+++.|.|.+.|.|.|.+.|+++++......... ......+|.|.+++.+|+| .|+|
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~-------~~~~~~~L~i~~v~~~D~G~~Y~C 230 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS-------GGLPSLGLTLANVTSDLNRKNVTC 230 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC-------CCSSEEEEEEESCCSTTTTCCEEE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc-------eecccceEEEeeCChHHCCCeEEE
Confidence 7888888888899999999999999999999999999865433221111 0112349999999999999 9999
Q ss_pred EEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCccce
Q psy15734 254 VAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
.|.|..|.....+.|.|..+|.. ....+..++...+.|.+.+.|.|.+.|.
T Consensus 231 ~a~n~~g~~~~~~~l~V~~~P~i--~~~~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 231 WAENDVGRAEVSVQVNVSFPASV--QLHTAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp CCEETTEECCEEECCCCBEEEEE--EECCCEESSSEEEEEEEEEESCCEEEEE
T ss_pred EEEcCCCCEEEEEEEEEcCCCee--eeccCccCceEEEEEEeeecCCCcEEEE
Confidence 99999999988888888766432 2333344556679999999999999995
No 349
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=94.03 Aligned_cols=94 Identities=22% Similarity=0.272 Sum_probs=72.5
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. +. ..+.++.+..+ +.|.|.+++.+|
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~-~~-------~~~~~~~~~~~----~~L~i~~v~~~d 73 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFT-FP-------GRDPRATIQEQ----GTLQIKNLRISD 73 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSE-ES-------SSCSSCEECTT----CCEEEESCCTTT
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEE-CC-------CCCCCEEEcCC----CEEEEccCCccc
Confidence 4678888889999999999999999999989899999995532 21 12334433322 269999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPP 124 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p 124 (314)
+|.|+|.+.|. +.....+.|.|..+|
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 74 TGTYTCVATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp CCEEEEEEECSSCCCBCCEEEEEESCC
T ss_pred CEEEEEEEEcCCCCEEEEEEEEEecCC
Confidence 99999999775 555667778887653
No 350
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.52 E-value=7.4e-14 Score=103.08 Aligned_cols=104 Identities=18% Similarity=0.282 Sum_probs=77.4
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.+..+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++ .. +..+.++.+.........|.|.+++.
T Consensus 37 ~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g-~~--------~~~~~~~~~~~~~~~~~~L~I~~v~~ 107 (154)
T 1fhg_A 37 KPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDD-NP--------VKESRHFQIDYDEEGNCSLTISEVCG 107 (154)
T ss_dssp CCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT-EE--------CCCSSSEEEEECTTCEEEEEESSCCG
T ss_pred cCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECC-EE--------CCCCCcEEEEECCCCeEEEEECCCCh
Confidence 3446788888888999999999999999999888999999954 32 22345565554433445899999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEEeCCceeee
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVVVPPRILLD 129 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~ 129 (314)
+|+|.|+|.+.|. +.....+.|.|..+|.....
T Consensus 108 ~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~ 141 (154)
T 1fhg_A 108 DDDAKYTCKAVNSLGEATCTAELLVETMGKEGEG 141 (154)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEECC------
T ss_pred hcCEEEEEEEEECCCeEEEEEEEEEeCcCcCCCC
Confidence 9999999999775 45566778888888776544
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.52 E-value=3e-14 Score=120.32 Aligned_cols=108 Identities=16% Similarity=0.204 Sum_probs=70.0
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC-ceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD-DYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
++....+.+|+++.|.|.+.| |+|.+.|+++++....... ..++.. .++ +|.|.+++.+|+|.|+|.|.|..
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~-----~L~I~~v~~~D~G~Y~C~a~N~~ 324 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNG-----DLFFKKVQVEDGGVYTCYAMGET 324 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETT-----EEEESSCCTTSCEEEEEEEECSS
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecC-----eEEEeecCcccCEEEEEEEecCC
Confidence 445678999999999999999 9999999997665443221 112222 555 89999999999999999999999
Q ss_pred CCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCcc
Q psy15734 260 GETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVS 304 (314)
Q Consensus 260 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~ 304 (314)
|.....+.|.|...+ ..++...+.|.|.+.|.|+|.
T Consensus 325 g~~~~~~~l~V~~~~---------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 325 FNETLSVELKVYNFT---------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp CEEEEEEEEEEESSC---------CC-------------------
T ss_pred CccEEEEEEEEEeee---------ccCCceEEEEEeCCCCCCccc
Confidence 999999998886532 233456799999999999874
No 352
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=3.6e-14 Score=97.40 Aligned_cols=92 Identities=16% Similarity=0.182 Sum_probs=68.0
Q ss_pred CCeEEcCCCc---ceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIPNQL---EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~~~~---~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
+|.+...+.. ..+.+|+++.|.|.+.+.|.+ +.|+++ +..+....++.+..... ...|.|.+++.+|+|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~-g~~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y 80 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKD-GQKVEESELLVVKMDGR----KHRLILPEAKVQDSGEF 80 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEET-TEECCCBTTBEEEEETT----EEEEEESSCCTTTCEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeC-CEECCCCCCEEEEeCCC----EEEEEECCCChhhCEEE
Confidence 4445444444 678999999999999999999 999997 44444445554432221 34899999999999999
Q ss_pred EEEEeeCCCCceeEEEEEEEecCCC
Q psy15734 252 RCVAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
+|.|.|.. ..+.|.|..+|.+
T Consensus 81 ~C~a~n~~----~~~~l~V~~~P~p 101 (104)
T 2e6p_A 81 ECRTEGVS----AFFGVTVQDPSGP 101 (104)
T ss_dssp EEECSSCC----CCEEEEEECCCCS
T ss_pred EEEECCce----EEEEEEEcCCCCC
Confidence 99999974 3667777776543
No 353
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.52 E-value=3.2e-14 Score=96.48 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=64.6
Q ss_pred CCCcceeecCccEEEEEEEe-ecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTE-AFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNAL 259 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~-g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~ 259 (314)
.+....+.+|+++.|.|.+. +.|.+.+.|++++..... .. ....++ +|.|.+++.+|+|.|+|.|.|..
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~-~~----~~~~~~-----~L~i~~v~~~D~G~Y~C~a~n~~ 85 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLP-SR----AMDFNG-----ILTIRNVQPSDAGTYVCTGSNMF 85 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCC-TT----EEEETT-----EEEECSCCGGGCEEEEEEEECSS
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCC-ce----eecCCC-----EEEEeCCChhhCEEEEEEecCCC
Confidence 44666889999999999998 689999999996433221 11 112333 89999999999999999999999
Q ss_pred CCceeEEEEEEE
Q psy15734 260 GETDGFIKVYVN 271 (314)
Q Consensus 260 g~~~~~~~l~V~ 271 (314)
|.....+.|.|.
T Consensus 86 g~~~~~~~l~V~ 97 (98)
T 1gl4_B 86 AMDQGTATLHVQ 97 (98)
T ss_dssp CEEEEEEEEEEC
T ss_pred CccccEEEEEEe
Confidence 998888888774
No 354
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.51 E-value=2.9e-12 Score=96.34 Aligned_cols=117 Identities=21% Similarity=0.240 Sum_probs=77.6
Q ss_pred CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
.|....|.+|+++.|.|.+....+..+.|-..-.... . ...+.+...|.|.+++. | |.|.|.+
T Consensus 5 ~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~-------~--------~~~~~~~~~l~l~~vs~-~-g~y~C~~ 67 (185)
T 1iam_A 5 SPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKE-------L--------LLPGNNRKVYELSNVQE-D-SQPMCYS 67 (185)
T ss_dssp ESSEEEEETTEEEEEEEEECSSSCSEEEEECSSCEEE-------E--------CSSSSSEEEEEEEEECS-C-BCCEEEE
T ss_pred ECCCcEEeCCCCEEEEEEccCCCCccceEEeeCCCcc-------E--------eccCCceeEEEEEecCc-C-CEEEEEE
Confidence 4566889999999999999653333466642111100 1 01112223689999983 4 9999999
Q ss_pred ecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CCC--ceEEEc
Q psy15734 107 NTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEP--YVAWRR 161 (314)
Q Consensus 107 ~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p--~~~W~~ 161 (314)
... ......+.|.|+.+|...... +....+.+|+.++|.|.+.+. |.+ .|+|++
T Consensus 68 ~c~~~~~~~~~~l~V~~~P~~v~i~-~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~k 125 (185)
T 1iam_A 68 NCPDGQSTAKTFLTVYWTPERVELA-PLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR 125 (185)
T ss_dssp ECSSCEEEEECEEEEEBCCSEEEEC-CCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE
T ss_pred ECCCCceEEEEEEEEeCCCCCCEEc-cCCccccCCCcEEEEEEcCCccCCCCcEEEEEe
Confidence 655 344666788998888765554 233447899999999999874 554 378888
No 355
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=7.2e-14 Score=98.24 Aligned_cols=83 Identities=14% Similarity=0.089 Sum_probs=64.8
Q ss_pred ccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEE
Q psy15734 191 QTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYV 270 (314)
Q Consensus 191 ~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 270 (314)
+...|.|.+.|.|.|.+.|+++ +..+............+.....+.|.|.++..+|+|.|+|.|.|..|....++.|.|
T Consensus 21 ~~~~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 99 (118)
T 1wwc_A 21 LEHCIEFVVRGNPPPTLHWLHN-GQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHF 99 (118)
T ss_dssp CEEEEEEEEECSSCCEEEEEET-TEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred cceEEEEEeeeeCCCeEEEEEC-CEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEE
Confidence 6678999999999999999997 444444444444333322223459999999999999999999999999999998877
Q ss_pred EecC
Q psy15734 271 NLVD 274 (314)
Q Consensus 271 ~~~~ 274 (314)
...|
T Consensus 100 ~~~P 103 (118)
T 1wwc_A 100 LKEP 103 (118)
T ss_dssp SCCC
T ss_pred ccCC
Confidence 7655
No 356
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.51 E-value=6.4e-14 Score=96.64 Aligned_cols=96 Identities=26% Similarity=0.328 Sum_probs=71.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ..+.++.+..++. ...|.|.+++.+|
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~-~~~--------~~~~~~~~~~~~~-~~~L~i~~~~~~D 80 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGG-QQL--------AASERLSFPADGA-EHGLLLTAALPTD 80 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT-EEC--------CCCSSEECCEETT-EEEEEESSCCGGG
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECC-eEC--------CCCCcEEEEeCCC-EEEEEEccCCHHh
Confidence 45788888899999999999999999998888899999954 322 2234444433322 2379999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCC
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPP 124 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p 124 (314)
+|.|+|.+.|. +.....+.|.|..+|
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 81 AGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEcCC
Confidence 99999999775 444556677777654
No 357
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.51 E-value=1.8e-13 Score=93.15 Aligned_cols=90 Identities=12% Similarity=0.004 Sum_probs=68.8
Q ss_pred CCeEEcCCCc-ceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQL-EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+|.|...+.. ..+.+|+++.|.|.+. .|.|.+.|++++ ..+....++.+..... ...|.|.++..+|+|.|+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g-~~i~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C 80 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNG-QEIRPSTKYIFEHKGC----QRILFINNCQMTDDSEYYV 80 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESS-CBCCCBTTEEEEEETT----EEEEEEEEECTTTCCEEEE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECC-EECCCCCCEEEEecCC----EEEEEEcCCCcCcCEEEEE
Confidence 5666666655 5788999999999999 799999999974 4444445555542221 2489999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecC
Q psy15734 254 VAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~ 274 (314)
.| |....++.|.|..+|
T Consensus 81 ~a----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 81 TA----GDEKCSTELFVRSGP 97 (100)
T ss_dssp EE----TTEEEEEEEEECCSC
T ss_pred EE----CCceEEEEEEEecCC
Confidence 99 677788888887654
No 358
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=6e-14 Score=96.14 Aligned_cols=91 Identities=12% Similarity=0.118 Sum_probs=69.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCC-ceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPA-SLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~-p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
|+.|..++.+..+.+|+++.|.|.+.+.|. +.+.|+++ +..+....++.+..... ..+|.|.+++.+|+|.|+|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~-g~~i~~~~r~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 82 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVG-GKTVGSSSRFQATRQGR----KYILVVREAAPSDAGEVVF 82 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSS-SSBCSBCSSCEEEEETT----EEEEEECSCCTTTCSCEEE
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEEC-CEECCCCCCEEEEEcCC----EEEEEECCCCHHHCEEEEE
Confidence 455666778889999999999999999885 48999997 44444555555543221 2489999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecC
Q psy15734 254 VAVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~ 274 (314)
.|.| ...+..|.|..+|
T Consensus 83 ~a~~----~~~~a~L~V~~~p 99 (104)
T 2eny_A 83 SVRG----LTSKASLIVRERS 99 (104)
T ss_dssp EETT----EEEEECEEEECCC
T ss_pred EECC----eeEEEEEEEeCCC
Confidence 9844 5678888888765
No 359
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.8e-14 Score=97.37 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=63.4
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.+...+....+.+|+++.|.|.+.+.|.|.+.|++++.. +... .+. .|.|.++..+|+|.|+|.
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~-~~~~--------~~~-----~L~i~~v~~~d~G~Y~C~ 75 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVP-LPLP--------PSP-----VLILPEIGPQDQGTYSCV 75 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSB-CSSC--------CCS-----EEEEESCCTTTCEEEECE
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEE-CcCC--------CCC-----EEEECCCCcccCEEEEEE
Confidence 45566667777899999999999999999999999996443 2221 122 999999999999999999
Q ss_pred EeeCCCCcee--EEEEEE
Q psy15734 255 AVNALGETDG--FIKVYV 270 (314)
Q Consensus 255 a~n~~g~~~~--~~~l~V 270 (314)
|.|..+.... .+.|.|
T Consensus 76 a~n~~~~~~~s~~~~v~V 93 (96)
T 2ens_A 76 ATHSSHGPQESRAVSISI 93 (96)
T ss_dssp ECCSSCCCEECCCEEEEE
T ss_pred EEeCCCCcEEEEEEEEEE
Confidence 9997665444 444444
No 360
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.50 E-value=2.8e-14 Score=111.81 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=80.7
Q ss_pred CCeEEc-CCCcce-eecCccEEEEEEEeec---CC-ceeEEecCCCeeeecCCceeeeEee-CCeeeEEEEEEeecCCCC
Q psy15734 175 PPMLTI-PNQLEG-AFVSQTVELHCHTEAF---PA-SLNYWTNEKGDMIITGDDYEDSRLI-NGYSCHMTLKIRSILSHQ 247 (314)
Q Consensus 175 ~p~~~~-~~~~~~-v~~g~~~~l~C~~~g~---p~-p~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~s~L~i~~~~~~d 247 (314)
+|.+.+ ++.... +.+|+++.|.|.+.|. |+ +.+.|+++++... ........... +.|...+.|.|.+++.+|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~-~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVH-TAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEEC-CCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCcccc-CcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 344433 344333 8899999999999987 44 7999999864322 11111111111 224456789999999999
Q ss_pred CeEEEEEEeeCCCCc--eeEEEEEEEecCCCeeEEEEcc----ccccEeEEEEEeec-cCC-Cccce
Q psy15734 248 FGSYRCVAVNALGET--DGFIKVYVNLVDGDIFQIRKMS----RLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 248 ~G~Y~C~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~~~----~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
+|.|+|.|.|..+.. ...+.+.+.....+.+.+.... .++...+.|.|.++ |++ .++|.
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 154 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWT 154 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEE
Confidence 999999999987754 2332211122223334333221 23455799999995 444 78895
No 361
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=5.8e-14 Score=97.37 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=74.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++.. + ....+............|.|.+++.+|
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~-~--------~~~~~~~~~~~~~~~~~L~i~~v~~~D 77 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKP-V--------RPDSAHKMLVRENGVHSLIIEPVTSRD 77 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSB-C--------CCCSSEEEEECTTSCEEEEESSCCGGG
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEE-C--------CCCCceEEEEecCCeEEEEEeeCCccc
Confidence 4578999999999999999999999999988899999995432 2 122222222222233489999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.|. +.....+.|.|..+|.
T Consensus 78 ~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 78 AGIYTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp CSBBCEEEECSSCEEEECCEEEEECCCC
T ss_pred CEEEEEEEECCCCEEEEEEEEEEeCCCC
Confidence 99999999775 4556667788877654
No 362
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.50 E-value=2.8e-14 Score=114.03 Aligned_cols=128 Identities=14% Similarity=0.148 Sum_probs=87.8
Q ss_pred EEcCCCcceeecCccEEEEEEEee---cCCceeEEecCCCee----eecC---------------------Cce--eeeE
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEA---FPASLNYWTNEKGDM----IITG---------------------DDY--EDSR 227 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g---~p~p~~~W~~~~~~~----~~~~---------------------~~~--~~~~ 227 (314)
+..++....+.+|+++.|.|.+.+ .|.+.+.|++++... +... ..+ +...
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 445667788999999999999998 889999999974321 1100 000 0001
Q ss_pred eeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-----eeEEEEEEEecCC-CeeEE-----EEccccccEeEEEEEe
Q psy15734 228 LINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET-----DGFIKVYVNLVDG-DIFQI-----RKMSRLHMGAYLCIAS 296 (314)
Q Consensus 228 ~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~-~~~~~-----~~~~~~~~g~~~C~a~ 296 (314)
..+ ....|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|...+. +.+.+ ..+..++...+.|.+.
T Consensus 85 ~~~---~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~ 161 (250)
T 2fbo_J 85 ANL---AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCT 161 (250)
T ss_dssp SCT---TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEE
T ss_pred ccC---CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEec
Confidence 110 01389999999999999999999988754 4477787776532 22322 1223355567999999
Q ss_pred eccCCCccceEE
Q psy15734 297 NGVVPSVSHRIM 308 (314)
Q Consensus 297 ~~~~~~~~w~v~ 308 (314)
+.|.|.+.|...
T Consensus 162 g~p~p~v~W~k~ 173 (250)
T 2fbo_J 162 DCANANVTWYTG 173 (250)
T ss_dssp SCTTCEEEEEEE
T ss_pred CCCCCeeEEEeC
Confidence 999899999654
No 363
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=5.5e-14 Score=96.83 Aligned_cols=89 Identities=10% Similarity=0.018 Sum_probs=68.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|..++....+.+|+++.|.|.+.+.|.+ +.|++++ ..+....++.+..... ...|.|.++..+|+|.|+|.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g-~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 81 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNG-VEVRPSKRITISHVGR----FHKLVIDDVRPEDEGDYTFV 81 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESS-CBCCCCSSCEEEEETT----EEEEEESSCCTTTCSCEEEE
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCC-EECcCCCCEEEEEeCC----EEEEEECCCCcCCCEEEEEE
Confidence 6778888888999999999999999999988 9999974 4444455555442221 24899999999999999999
Q ss_pred EeeCCCCceeEEEEEEE
Q psy15734 255 AVNALGETDGFIKVYVN 271 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~ 271 (314)
|.|. .....+.|.|.
T Consensus 82 a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 82 PDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EETS--CCCCCBCEEEE
T ss_pred EccC--CceEEEEEEEE
Confidence 9998 34445555554
No 364
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.49 E-value=1.8e-14 Score=101.22 Aligned_cols=99 Identities=20% Similarity=0.189 Sum_probs=67.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC--ceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD--DYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
||.|...+....+.+|+++.|.|.+.|.|.|.+.|++++........ ........++......|.|.+++.+|+|.|+
T Consensus 9 pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~ 88 (117)
T 2v9t_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYV 88 (117)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEE
T ss_pred CCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEE
Confidence 67788888888899999999999999999999999997543332211 1112222333111112333366899999999
Q ss_pred EEEeeCCCCce-eEEEEEEEec
Q psy15734 253 CVAVNALGETD-GFIKVYVNLV 273 (314)
Q Consensus 253 C~a~n~~g~~~-~~~~l~V~~~ 273 (314)
|.|.|..|... ..+.|.|...
T Consensus 89 C~a~N~~G~~~s~~~~l~~~~~ 110 (117)
T 2v9t_A 89 CVARNYLGEAVSHDASLEVAAA 110 (117)
T ss_dssp EEEEETTEEEECCCEEEEEC--
T ss_pred EEEEeCccceEeeeEEEEhhhh
Confidence 99999999774 5666666544
No 365
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.49 E-value=1.6e-13 Score=93.13 Aligned_cols=93 Identities=17% Similarity=0.307 Sum_probs=67.7
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ....++.... ......|.|.+++.+|+
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~-~~~~-------~~~~~~~~~~-~~~~~~L~i~~~~~~D~ 74 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNR-QPVR-------PDQRRFAEEA-EGGLCRLRILAAERGDA 74 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETT-EECC-------CBTTEEEEEC-GGGEEEEEESSCCGGGC
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECC-EECC-------CCCCEEEEEC-CCCEEEEEEccCCcCCC
Confidence 4678888888999999999999999998888999999954 3221 1122233222 22234799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEE
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
|.|+|.+.|. +.....+.|.|.
T Consensus 75 G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 75 GFYTCKAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEECCCceeEEEEEEEE
Confidence 9999999775 444455566654
No 366
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=4.1e-13 Score=92.74 Aligned_cols=96 Identities=21% Similarity=0.196 Sum_probs=68.4
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCc---eEEEEEEcCceeEEEeeeeeeecCcCEEEEe-----CCceeEEEEE
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLRE---YKVAWVKMITQTILSIHHKVVTQNKRVSITF-----NDHRSWFLHL 91 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~---~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~i 91 (314)
..|.|+..|..+.+.+|++++|.|.+.+.|. +.+.|+|++.. ... .....++.+.. .....+.|.|
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~I 76 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWV-DLS-----SKVGQHLQLHDSYDRASKVYLFELHI 76 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTE-EGG-----GGCBTTEEEEEEEETTTTEEEEEEEE
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcc-ccc-----ccCCceEEEeeEEecccccceEEEEE
Confidence 4588888999999999999999999998877 89999995421 100 11122333321 1112458999
Q ss_pred eeecCCCCeEEEEEEecC-CCcceeEEEEEE
Q psy15734 92 RDVQETDRGWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 92 ~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
.+++.+|+|.|+|.+.|. +..+..+.|.|.
T Consensus 77 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 77 TDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ecCCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999875 455566677664
No 367
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.49 E-value=2.9e-14 Score=110.62 Aligned_cols=127 Identities=12% Similarity=0.146 Sum_probs=91.7
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeee---------cCCceeeeEeeCCeeeEEEEEEeecCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMII---------TGDDYEDSRLINGYSCHMTLKIRSILS 245 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~---------~~~~~~~~~~~~~~~~~s~L~i~~~~~ 245 (314)
++.+..++....+.+|+++.|.|.+.+.|.+.+.|++++..... .....+... .+. .|.|.+++.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~-----~L~i~~~~~ 77 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTF-LPT-----GITFKSVTR 77 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEE-ETT-----EEECSCCCT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEe-ecc-----EEEEeeCCH
Confidence 34567778888999999999999999999999999997554211 011111111 123 899999999
Q ss_pred CCCeEEEEEEeeCCCC--ceeEEEEEEEecCCCeeEE--EEccccccEeEEEEE-eeccCCCccceE
Q psy15734 246 HQFGSYRCVAVNALGE--TDGFIKVYVNLVDGDIFQI--RKMSRLHMGAYLCIA-SNGVVPSVSHRI 307 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~~~~~~--~~~~~~~~g~~~C~a-~~~~~~~~~w~v 307 (314)
+|+|.|+|.|.|..|. ....+.|.|..+|...... ..+..++...+.|.+ .+.|.|.+.|..
T Consensus 78 ~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~ 144 (209)
T 1nbq_A 78 EDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFK 144 (209)
T ss_dssp TSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEE
T ss_pred HHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEE
Confidence 9999999999998663 4567778887765433221 123445556799997 888889999953
No 368
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.49 E-value=2e-13 Score=92.63 Aligned_cols=93 Identities=17% Similarity=0.301 Sum_probs=70.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ .. +..+.++.+..++. ...|.|.+++.+|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g-~~--------~~~~~~~~~~~~~~-~~~L~i~~~~~~d 73 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDG-KA--------ITQGGKYKLSEDKG-GFFLEIHKTDTSD 73 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETT-EE--------CCSSSSEEEEEETT-EEEEEECSCCGGG
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECC-EE--------CcCCCCEEEEEeCC-EEEEEECCCCccc
Confidence 34678888889999999999999999998888999999954 32 22345665554432 3379999999999
Q ss_pred CeEEEEEEecC-CCcceeEEEEEE
Q psy15734 99 RGWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 99 ~G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
+|.|+|.+.|. +.....+.|.|.
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 74 SGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCcEeEEEEEEEE
Confidence 99999999775 444555556654
No 369
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.49 E-value=3.6e-13 Score=105.27 Aligned_cols=126 Identities=16% Similarity=0.176 Sum_probs=84.3
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeec-CCceeEEecCC---Cee-eec-C------------CceeeeEeeCCeeeEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAF-PASLNYWTNEK---GDM-IIT-G------------DDYEDSRLINGYSCHMT 237 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~-p~p~~~W~~~~---~~~-~~~-~------------~~~~~~~~~~~~~~~s~ 237 (314)
+.+..++ ...+.+|+++.|.|.+.+. |.+.+.|++.+ ... +.. . .++.+.. . ....+
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~---~~~~~ 76 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS-S---GADRY 76 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE-E---TTEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec-C---CceEE
Confidence 4566667 7889999999999999999 99999999832 111 100 0 1222211 1 12348
Q ss_pred EEEeecCCCCCeEEEEEEeeCCC-----CceeEEEEEEEecC--CCeeEEEEc----cccccEeEEEEEeec-cCC-Ccc
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALG-----ETDGFIKVYVNLVD--GDIFQIRKM----SRLHMGAYLCIASNG-VVP-SVS 304 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~--~~~~~~~~~----~~~~~g~~~C~a~~~-~~~-~~~ 304 (314)
|.|.+++.+|+|.|+|.|.|..| .....+.|.|...+ .+.+.+... ...+...+.|.+.+. |+| .+.
T Consensus 77 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~ 156 (218)
T 3s96_B 77 LSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVA 156 (218)
T ss_dssp EEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEE
Confidence 99999999999999999999876 33445677777543 233333211 122446799999984 555 788
Q ss_pred ce
Q psy15734 305 HR 306 (314)
Q Consensus 305 w~ 306 (314)
|.
T Consensus 157 W~ 158 (218)
T 3s96_B 157 WK 158 (218)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 370
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=5.5e-14 Score=98.36 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=73.4
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
++.|...+..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+ ..+.++.+.........|.|.+++.+|+|
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g-~~l--------~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 83 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDK-TPL--------HANELNEIDAQPGGYHVLTLRQLALKDSG 83 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESS-CEE--------CCSSSCCBCCBTTTBCCBEECSCCTTTCE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECC-EEC--------CCCCcEEEEEcCCCEEEEEEcCCChhhCE
Confidence 457888899999999999999999999888899999954 332 22333333322222337999999999999
Q ss_pred EEEEEEecCCCcceeEEEEEEeCCceeeec
Q psy15734 101 WYMCQINTVPMTSQKGYLQVVVPPRILLDR 130 (314)
Q Consensus 101 ~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~~ 130 (314)
.|+|.+ +.....+.|.|..+|.+...+
T Consensus 84 ~Y~C~~---g~~~~~~~L~V~~~p~~~~~~ 110 (115)
T 2cr6_A 84 TIYFEA---GDQRASAALRVTEKPSVFSRS 110 (115)
T ss_dssp EEEEEE---TTEECCEEEEEECCSSCCSSS
T ss_pred EEEEEE---CCeeEEEEEEEECCCceeccC
Confidence 999995 345566789999888766544
No 371
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.49 E-value=2.6e-13 Score=91.36 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=66.5
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVA 255 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a 255 (314)
+.|...+....+.+|+++.|.|.+ +.|.+.+.|+++ +..+....++.+..... ...|.|.+++.+|+|.|+|.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~-~~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRG-GSDISASNKYGLATEGT----RHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECS-SSEECSSTTCEEEEETT----EEEEEESSCCTTCCSEEEEEE
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEEC-CEECCCCCcEEEEEcCC----EEEEEEcCCCcccCEEEEEEE
Confidence 455566777889999999999999 889999999997 44454555555543222 248999999999999999999
Q ss_pred eeCCCCceeEEEEEEE
Q psy15734 256 VNALGETDGFIKVYVN 271 (314)
Q Consensus 256 ~n~~g~~~~~~~l~V~ 271 (314)
|.....+.|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 566677777775
No 372
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=2.5e-14 Score=97.59 Aligned_cols=89 Identities=16% Similarity=0.269 Sum_probs=66.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC----ceeeeEeeCCeeeEEEEEEeecCCCCCeE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD----DYEDSRLINGYSCHMTLKIRSILSHQFGS 250 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~----~~~~~~~~~~~~~~s~L~i~~~~~~d~G~ 250 (314)
||.|..++....+.+|+++.|.|.+.+.| +.+.|++++.. +.... ++.+. .++ ....|.|.++..+|+|.
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~-i~~~~~~~~~~~~~--~~~--~~~~L~I~~~~~~D~G~ 81 (101)
T 2edk_A 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVE-LTREDSFKARYRFK--KDG--KRHILIFSDVVQEDRGR 81 (101)
T ss_dssp CCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCB-CCCSCCSSCCCEEE--ECS--SEEEEECSSCCGGGCSB
T ss_pred CCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEE-CCCCCCcceeEEEE--ECC--CEEEEEECCCChhhCEE
Confidence 56777777888999999999999999999 99999997543 43333 33443 222 13489999999999999
Q ss_pred EEEEEeeCCCCceeEEEEEEEec
Q psy15734 251 YRCVAVNALGETDGFIKVYVNLV 273 (314)
Q Consensus 251 Y~C~a~n~~g~~~~~~~l~V~~~ 273 (314)
|+|.|.| ......|.|..+
T Consensus 82 Y~C~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 82 YQVITNG----GQCEAELIVEEK 100 (101)
T ss_dssp EEEECSS----CEECCBEEEECC
T ss_pred EEEEEcC----CcEEEEEEEeCC
Confidence 9999987 344555666554
No 373
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.48 E-value=6.1e-14 Score=105.39 Aligned_cols=112 Identities=15% Similarity=0.159 Sum_probs=80.2
Q ss_pred cceeecCccEEEEEEEeecCCceeEEecCCCeeeec-CCc------e--eeeEe-eCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 184 LEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIIT-GDD------Y--EDSRL-INGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~-~~~------~--~~~~~-~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
.+.+.+|++++|.|.+.+ |.+.+.|++++..+..- ... + ++... .++ +|.|.+++.+|+|.|+|
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~-----sL~I~~v~~~DsG~Y~C 77 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG-----SLTIYNLTSSDEDEYEM 77 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC-----CEEECSCCGGGCEEEEE
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC-----eEEECCCChhhCceEEE
Confidence 356789999999999854 88999999975432211 100 1 11111 233 89999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCccce
Q psy15734 254 VAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
.|.|..| ...+.|.|..++..+........ +.++|.+.+.+.|.++|.
T Consensus 78 ~~~n~~~--~~~~~L~V~~~~~~p~i~~~~~~---~~L~C~~~~~p~p~i~W~ 125 (171)
T 1ccz_A 78 ESPNITD--TMKFFLYVLEMVSKPMIYWECSN---ATLTCEVLEGTDVELKLY 125 (171)
T ss_dssp ECTTCCS--CEEEEEEEECCCCCCEEEEETTT---TEEEEECSSCSSCEEEEE
T ss_pred EEeCCCC--cEEEEEEEECcCCCCEEEEecCC---cEEEEEeCCCCCcEEEEE
Confidence 9999887 67888888876543333222222 479999999888999995
No 374
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.48 E-value=1.5e-13 Score=105.49 Aligned_cols=122 Identities=11% Similarity=0.065 Sum_probs=83.1
Q ss_pred CCCcceeecCccEEEEEEEee-cCCceeEEecCCCeee-ec-CC-----------ce--eeeEeeCCeeeEEEEEEeecC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEA-FPASLNYWTNEKGDMI-IT-GD-----------DY--EDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g-~p~p~~~W~~~~~~~~-~~-~~-----------~~--~~~~~~~~~~~~s~L~i~~~~ 244 (314)
.+..+.+.+|++++|.|.+.+ .+.+.+.|++++..+. .. .. .+ +.....++ +|.|.+++
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~-----sL~I~~v~ 78 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSY-----SLQLSNLK 78 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTC-----CEEECSCC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCe-----EEEECCCC
Confidence 455677899999999999976 4557999999743221 11 00 00 11122233 89999999
Q ss_pred CCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEc---cccc-cEeEEEEEeec-cCCCccceE
Q psy15734 245 SHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKM---SRLH-MGAYLCIASNG-VVPSVSHRI 307 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~---~~~~-~g~~~C~a~~~-~~~~~~w~v 307 (314)
.+|+|.|+|.|.|..+.....+.|.|...+..+...... ..+. ...++|.|.+. +.|.++|..
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~ 146 (193)
T 2if7_A 79 MEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEA 146 (193)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEE
T ss_pred cccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEe
Confidence 999999999999998877778888887654332222111 1122 45799999995 478999963
No 375
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.48 E-value=1.8e-13 Score=94.53 Aligned_cols=98 Identities=16% Similarity=0.335 Sum_probs=64.5
Q ss_pred ccCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 16 CEKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 16 ~~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
+.+..+|.|...+....+.+|+++.|.|.+.+.+.+.+.|++++.. + ..+.++.+.... +.|.|.+++
T Consensus 5 v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~-~--------~~~~~~~~~~~~---~~L~i~~v~ 72 (108)
T 3kvq_A 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNET-L--------VEDSGIVLKDGN---RNLTIRRVR 72 (108)
T ss_dssp ------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSB-C--------CCBTTEEEETTT---TEEEECSCC
T ss_pred ECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeE-c--------ccCCCeEEeCCC---cEEEEeecC
Confidence 3445688998889999999999999999999888889999996543 1 222333332221 379999999
Q ss_pred CCCCeEEEEEEecC-CCcceeEEEEEEeCCc
Q psy15734 96 ETDRGWYMCQINTV-PMTSQKGYLQVVVPPR 125 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 125 (314)
.+|+|.|+|.+.|. +.....+.|.|..+|.
T Consensus 73 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 73 KEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp GGGCEEEEEEEC----CEEEEEEEEEEC---
T ss_pred cccCEEEEEEEEeCCCceEEEEEEEEeCCCc
Confidence 99999999999765 5566677788877654
No 376
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=4.2e-14 Score=96.09 Aligned_cols=84 Identities=12% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
++....+.+|+++.|.|.+.|.| |.+.|++++. .+....++.+. +. .|.|.++..+|+|.|+|.|.|..|
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~-~~~~~~~~~~~---~~-----~L~i~~v~~~D~G~Y~C~a~n~~g 78 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGV-QLAESNRTRIT---GE-----EVEVQDSVPADSGLYACVTSSPSG 78 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSS-BCCCCSSEEEC---SS-----EEEETTCCTTTCEEEEEEEEETTE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCE-ECCCCCcEEEE---CC-----EEEEccCCHHHCEEEEEEEEeCCc
Confidence 34556788999999999999987 7999999753 33333333322 33 999999999999999999999999
Q ss_pred CceeEEEEEEEecC
Q psy15734 261 ETDGFIKVYVNLVD 274 (314)
Q Consensus 261 ~~~~~~~l~V~~~~ 274 (314)
.....+.|.|...+
T Consensus 79 ~~~~~~~l~V~~~~ 92 (99)
T 2cr3_A 79 SDTTYFSVNVSDAL 92 (99)
T ss_dssp EEEEEEEECBCSCC
T ss_pred eEEEEEEEEEecCC
Confidence 88888888776543
No 377
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.48 E-value=8.4e-14 Score=110.54 Aligned_cols=130 Identities=8% Similarity=0.002 Sum_probs=82.8
Q ss_pred eEEcCCCcce-eecCccEEEEEEEeec---CCc-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 177 MLTIPNQLEG-AFVSQTVELHCHTEAF---PAS-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 177 ~~~~~~~~~~-v~~g~~~~l~C~~~g~---p~p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
++..++.... +.+|++++|.|.+.|. |.+ .+.|+++++...............+.|...+.|.|.+++.+|+|.|
T Consensus 18 v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y 97 (239)
T 1i1c_A 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTF 97 (239)
T ss_dssp EEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCE
T ss_pred EEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeE
Confidence 3344555555 7899999999999987 776 8999998654331111111111223366677999999999999999
Q ss_pred EEEEeeCCCCceeEEEEEE--EecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 252 RCVAVNALGETDGFIKVYV--NLVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 252 ~C~a~n~~g~~~~~~~l~V--~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
+|.|.|..+.......+.. .....+.+.+.... .+....+.|.|.+++++ .+.|.
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWK 160 (239)
T ss_dssp EEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEE
Confidence 9999999886533222211 12222334433221 12345799999997655 67885
No 378
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=5.2e-13 Score=91.34 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=68.6
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCc--CEEEEeCCceeEEEEEeeecCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNK--RVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
++.|..++..+.+.+|+++.|.|.+.+ +.+.+.|++++ ..+ ..+. ++.+..++. ...|.|.+++.+|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g-~~l--------~~~~~~~~~~~~~~~-~~~L~I~~~~~~D 75 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNG-EEI--------IPGPKSRYRIRVEGK-KHILIIEGATKAD 75 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETT-EEC--------CCSTTCSEEEEEETT-EEEEEEEEECTTT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECC-EEC--------CCCCceEEEEEEcCC-EEEEEECCCCccc
Confidence 344788888999999999999999987 66899999954 322 2233 445554432 3479999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.| ....+.|.|..+|.
T Consensus 76 ~G~Y~C~a~n---~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 76 AAEYSVMTTG---GQSSAKLSVDLKSG 99 (103)
T ss_dssp CSEEEEEETT---EEEEEEEEEECCCS
T ss_pred CEEEEEEECC---CcEEEEEEEeCCCC
Confidence 9999999965 45667788877653
No 379
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.47 E-value=7.2e-13 Score=90.09 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=69.6
Q ss_pred CCCceecCCcc-eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 20 DMPRFAEPVAN-VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 20 ~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
.+|.|..++.. +.+.+|+++.|.|.+. .+.+.+.|++++.. + ..+.++.+..++.. ..|.|.+++.+|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~-i--------~~~~~~~~~~~~~~-~~L~I~~~~~~D 74 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQE-I--------RPSTKYIFEHKGCQ-RILFINNCQMTD 74 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCB-C--------CCBTTEEEEEETTE-EEEEEEEECTTT
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEE-C--------CCCCCEEEEecCCE-EEEEEcCCCcCc
Confidence 47888887776 6889999999999998 58889999995532 2 23345655544332 379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCC
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPP 124 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p 124 (314)
+|.|+|.+ +.....+.|.|..+|
T Consensus 75 ~G~Y~C~a---g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 75 DSEYYVTA---GDEKCSTELFVRSGP 97 (100)
T ss_dssp CCEEEEEE---TTEEEEEEEEECCSC
T ss_pred CEEEEEEE---CCceEEEEEEEecCC
Confidence 99999999 445666778887766
No 380
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.47 E-value=1.9e-13 Score=105.47 Aligned_cols=118 Identities=15% Similarity=0.153 Sum_probs=81.3
Q ss_pred ceeecCccEEEEEEEe----ecCCceeEEecCCCeeeecC-----------CceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 185 EGAFVSQTVELHCHTE----AFPASLNYWTNEKGDMIITG-----------DDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~----g~p~p~~~W~~~~~~~~~~~-----------~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
+.+.+|+++.|.|.+. +.|.+.+.|++++....... .+..+....+. +|.|.+++.+|+|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~-----~L~I~~v~~~D~G 78 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNL-----SIVILALRPSDEG 78 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTT-----EEEECSCCGGGCE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCc-----EEEEecccchhCe
Confidence 5688999999999995 45778999999754332110 11111111223 8999999999999
Q ss_pred EEEEEEeeCCCCce-----eEEEEEEEecCC-CeeEEEEccccccEeEEEEEe-eccCCCccceE
Q psy15734 250 SYRCVAVNALGETD-----GFIKVYVNLVDG-DIFQIRKMSRLHMGAYLCIAS-NGVVPSVSHRI 307 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~-----~~~~l~V~~~~~-~~~~~~~~~~~~~g~~~C~a~-~~~~~~~~w~v 307 (314)
.|+|.|.|..|... ..+.|.|...+. +.+.+.....++...+.|.+. +.|.|.+.|..
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k 143 (201)
T 1dr9_A 79 TYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLE 143 (201)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEE
T ss_pred EEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEE
Confidence 99999999887653 466677766433 333333334444557999995 88999999953
No 381
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.47 E-value=1.1e-13 Score=94.66 Aligned_cols=92 Identities=17% Similarity=0.355 Sum_probs=71.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+....+.+|+++.|.|.+.+.|.+ +.|++++ ..+....++.+.. ++ ....|.|.+++.+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~-~~l~~~~~~~~~~--~~--~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2e7b_A 8 PVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGN-NVLRPGDKYSLRQ--EG--AMLELVVRNLRPQDSGRYSCS 81 (103)
T ss_dssp CCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESS-SBCCCSSSEEEEE--CS--SEEEEEECSCCTTTCCCEEEE
T ss_pred CCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECC-EECCCCCcEEEEE--cC--CEEEEEEccCCcccCEEEEEE
Confidence 6677777788899999999999999999999 9999964 4444445554432 22 134799999999999999998
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.|.....+.|.|..+|..
T Consensus 82 ----~g~~~~~~~l~V~~~p~~ 99 (103)
T 2e7b_A 82 ----FGDQTTSATLTVTALPSG 99 (103)
T ss_dssp ----CSSCBCCBCEEEECCCCC
T ss_pred ----ECCcEEEEEEEEEecccc
Confidence 566777888888877643
No 382
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=2.4e-13 Score=93.04 Aligned_cols=93 Identities=16% Similarity=0.333 Sum_probs=72.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|..++..+.+.+|+++.|.|.+.+ +.+.+.|++++. .+ ..+.++.+..++. ...|.|.+++.+|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~-~~--------~~~~~~~~~~~~~-~~~L~I~~v~~~D 74 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRK-AI--------RKSQKYDVVCEGT-MAMLVIRGASLKD 74 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSC-BC--------CCSSSEEEEEETT-EEEEEESSCCTTT
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCE-Ec--------cCCCCEEEEECCC-EEEEEECCCCccc
Confidence 46788888899999999999999999987 777899999543 22 2344555554433 3379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.| ....+.|.|..+|.
T Consensus 75 ~G~Y~C~a~n---~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 75 AGEYTCEVEA---SKSTASLHVEEKAS 98 (103)
T ss_dssp CSEEEEECSS---CEEEEEEEECCCSS
T ss_pred CEEEEEEEcc---CCcEEEEEEeCCCC
Confidence 9999999976 45667788877664
No 383
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.47 E-value=8e-13 Score=92.06 Aligned_cols=92 Identities=24% Similarity=0.341 Sum_probs=70.9
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|..++....+.+|+++.|.|.+.+. +.+.|++++.. +..+.++.+..++. ...|.|.+++.+|+
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~---------l~~~~~~~~~~~~~-~~~L~I~~v~~~D~ 85 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHET---------LRDGDRHSLRQDGA-RCELQIRGLVAEDA 85 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSB---------CCCSSSEEEEEETT-EEEEEECSCCSTTC
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEE---------CCCCCcEEEEECCC-EEEEEECCCChhhC
Confidence 45688888889999999999999999774 68999995532 22345666655433 33799999999999
Q ss_pred eEEEEEEecCCCcceeEEEEEEeCCce
Q psy15734 100 GWYMCQINTVPMTSQKGYLQVVVPPRI 126 (314)
Q Consensus 100 G~Y~C~~~~~~~~~~~~~l~v~~~p~~ 126 (314)
|.|+|.+ +.....+.|.|..+|..
T Consensus 86 G~Y~C~a---~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 86 GEYLCMC---GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp EEEEEEE---TTEEEEEEEEECCCCCS
T ss_pred EEEEEEe---CCCCEEEEEEEeCCCCC
Confidence 9999999 45566778888776643
No 384
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.47 E-value=2e-13 Score=106.86 Aligned_cols=124 Identities=10% Similarity=0.057 Sum_probs=83.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEE--EEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHM--TLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s--~L~i~~~~~~d~G~Y~ 252 (314)
+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|++............ .. ... .|.|.+++.+|+|.|+
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~--~~----~~~~~~L~I~~v~~~D~G~Y~ 80 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLK--FW----NETDPEFVIDHMDANKAGRYQ 80 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----------CCCEEEECSCCGGGCEEEE
T ss_pred CCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCC--CC----cceeeEEEEcccccccCEEEE
Confidence 566666555 47899999999999987 68899999975443322111000 00 113 8999999999999999
Q ss_pred EEEeeCCCCc--eeEEEEEEEecC-CCeeEEE---EccccccEeEEEEEeeccCCCccce
Q psy15734 253 CVAVNALGET--DGFIKVYVNLVD-GDIFQIR---KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 253 C~a~n~~g~~--~~~~~l~V~~~~-~~~~~~~---~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|.|..|.. +..+.|.|.... .+.+... .+..++...+.|.+.+.+++.+.|.
T Consensus 81 C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~~W~ 140 (218)
T 1uct_A 81 CQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISLTCSSAHIPFDRFSLA 140 (218)
T ss_dssp EEEEETTTEEEECCCEEEEEECSSCCCEEEESSCSEECTTCCCEEEEECSSSCCSEEEEE
T ss_pred EEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCCccCCCCCEEEEEeCCCCCCCEEEEE
Confidence 9999987633 345677776532 3444332 2345555679997777777788884
No 385
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.47 E-value=1.5e-13 Score=108.36 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=87.8
Q ss_pred CCCcceeecCccEEEEEEEeecCC-ceeEEecCCCe----eee----cCCce--eee----------EeeCCeeeEEEEE
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPA-SLNYWTNEKGD----MII----TGDDY--EDS----------RLINGYSCHMTLK 239 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~-p~~~W~~~~~~----~~~----~~~~~--~~~----------~~~~~~~~~s~L~ 239 (314)
.+....+.+|+++.|.|.+.+.|. +.+.|++++.. .+. ....+ ++. ...++ .|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-----~L~ 80 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG-----RLV 80 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC-----CEE
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc-----eEE
Confidence 456678999999999999999995 89999986433 111 11111 111 22223 599
Q ss_pred EeecCCCCCeEEEEEEeeCC-CCceeEEEEEEEecCCCeeEEEEc-----cccccE-eEEEEE-eeccCCCccce
Q psy15734 240 IRSILSHQFGSYRCVAVNAL-GETDGFIKVYVNLVDGDIFQIRKM-----SRLHMG-AYLCIA-SNGVVPSVSHR 306 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~-----~~~~~g-~~~C~a-~~~~~~~~~w~ 306 (314)
|.+++.+|+|.|+|.|.|.. +.....+.|.|...+..+...... ..++.. .+.|.+ .+.|.|.+.|.
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~ 155 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWY 155 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEE
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEE
Confidence 99999999999999999987 777888999998876654433222 233333 799999 88999999996
No 386
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.47 E-value=2.5e-13 Score=88.80 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=61.5
Q ss_pred CcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEEe
Q psy15734 28 VANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQIN 107 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 107 (314)
...+.+.+|+++.|.|.+.+ |.+.+.|+|++ ..+ ..+.++.+..++.. ..|.|.+++.+|+|.|+|.+.
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g-~~l--------~~~~~~~~~~~~~~-~~L~I~~~~~~D~G~Y~C~a~ 71 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDG-ERL--------ASQGRVQLEQAGAR-QVLRVQGARSGDAGEYLCDAP 71 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETT-EEC--------CCCSSEEEEECSSC-EEEEESSCSSTTCEEEEEECT
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECC-EEc--------cccccEEEeecCCe-EEEEecCCCCcccEEEEEEEC
Confidence 45788999999999999976 77889999954 432 33456666555433 379999999999999999984
Q ss_pred cCCCcceeEEEEEEeC
Q psy15734 108 TVPMTSQKGYLQVVVP 123 (314)
Q Consensus 108 ~~~~~~~~~~l~v~~~ 123 (314)
+ ....+.|.|.+|
T Consensus 72 n---~~~~a~l~V~eP 84 (84)
T 2lu7_A 72 Q---DSRIFLVSVEEP 84 (84)
T ss_dssp T---TCEEEEEEECCC
T ss_pred C---EEEEEEEEEECC
Confidence 4 355666777543
No 387
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.47 E-value=4.3e-13 Score=96.91 Aligned_cols=89 Identities=19% Similarity=0.204 Sum_probs=66.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeec---------CCceeeeEeeCCeeeEEEEEEeecCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIIT---------GDDYEDSRLINGYSCHMTLKIRSILS 245 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~---------~~~~~~~~~~~~~~~~s~L~i~~~~~ 245 (314)
||.|...+....+.+|+++.|.|.+.|.|.|.+.|++++...... ..++.+..... ....++|.|.+++.
T Consensus 21 pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~I~~v~~ 99 (137)
T 3qr2_A 21 MAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYH-QHAASTISIDTLVE 99 (137)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEES-SSEEEEEEECSCCG
T ss_pred CCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccc-cccceEEEECCCCc
Confidence 888888888899999999999999999999999999964432111 11111111111 11235999999999
Q ss_pred CCCeEEEEEEeeCCCCcee
Q psy15734 246 HQFGSYRCVAVNALGETDG 264 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~~~~ 264 (314)
+|+|.|+|.|.|..|....
T Consensus 100 ~D~G~Y~C~a~N~~G~~~~ 118 (137)
T 3qr2_A 100 EDTGTYECRASNDPDRNHL 118 (137)
T ss_dssp GGCEEEEEEEECCTTSSSC
T ss_pred ccCEEEEEEEEecCCccce
Confidence 9999999999999998643
No 388
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=93.57 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=71.3
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCc-eEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLRE-YKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~-~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
..+|.|..++..+.+.+|++++|.|.+.+.+. +.+.|++++. . +..+.++.+..++. ..+|.|.+++.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~-~--------i~~~~r~~~~~~~~-~~~L~I~~v~~~ 75 (104)
T 2eny_A 6 SGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGK-T--------VGSSSRFQATRQGR-KYILVVREAAPS 75 (104)
T ss_dssp CCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSS-B--------CSBCSSCEEEEETT-EEEEEECSCCTT
T ss_pred cCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCE-E--------CCCCCCEEEEEcCC-EEEEEECCCCHH
Confidence 34567888899999999999999999988664 4799999543 2 22344666554433 237999999999
Q ss_pred CCeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 98 DRGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 98 d~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
|+|.|+|.+.+ ....+.|.|..+|.
T Consensus 76 D~G~Y~C~a~~---~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 76 DAGEVVFSVRG---LTSKASLIVRERSG 100 (104)
T ss_dssp TCSCEEEEETT---EEEEECEEEECCCS
T ss_pred HCEEEEEEECC---eeEEEEEEEeCCCc
Confidence 99999999843 45667788887764
No 389
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.47 E-value=5.4e-13 Score=92.93 Aligned_cols=91 Identities=20% Similarity=0.269 Sum_probs=70.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+....+.+|+++.|.|.+.+. |.+.|++++ ..+....++.+..... ...|.|.++..+|+|.|+|.
T Consensus 19 pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~-~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 91 (113)
T 2edh_A 19 PIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGH-ETLRDGDRHSLRQDGA----RCELQIRGLVAEDAGEYLCM 91 (113)
T ss_dssp CCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESS-SBCCCSSSEEEEEETT----EEEEEECSCCSTTCEEEEEE
T ss_pred CCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECC-EECCCCCcEEEEECCC----EEEEEECCCChhhCEEEEEE
Confidence 5677777778899999999999999775 789999974 4444455555443221 34899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
| |.....+.|.|..+|..
T Consensus 92 a----~~~~~~~~l~V~~~p~~ 109 (113)
T 2edh_A 92 C----GKERTSAMLTVRAMPSG 109 (113)
T ss_dssp E----TTEEEEEEEEECCCCCS
T ss_pred e----CCCCEEEEEEEeCCCCC
Confidence 9 77788888888877643
No 390
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.46 E-value=5.4e-13 Score=103.90 Aligned_cols=127 Identities=17% Similarity=0.169 Sum_probs=84.2
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC---Cee-eec---------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK---GDM-IIT---------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~---~~~-~~~---------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+.+..++....+.+|+++.|.|.+.+.|.+.+.|++.+ ... +.. ..++.... .. ...+|.|.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~ 77 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG-SG---RDSSFTISS 77 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEESS
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec-cC---CEEEEEECC
Confidence 45666677888999999999999999999999999832 111 111 12332221 11 235899999
Q ss_pred cCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec-CCCeeEEEEc----cccccEeEEEEEeeccCC--Cccce
Q psy15734 243 ILSHQFGSYRCVAVNALGET-DGFIKVYVNLV-DGDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~-~~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
++.+|+|.|+|.|.|..+.. .....|.|... ..+.+.+... ..+....+.|.+.+.+++ .+.|.
T Consensus 78 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~ 149 (213)
T 3r06_A 78 LESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWK 149 (213)
T ss_dssp CCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEE
T ss_pred CCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEE
Confidence 99999999999999876532 34455666332 2233333221 123346799999997754 78885
No 391
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.46 E-value=1.4e-13 Score=107.09 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=88.6
Q ss_pred EEcCCCcceeecCccEEEEEEEeecC----CceeEEecCCC---------------eeeec-----CCceeeeEee-CCe
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFP----ASLNYWTNEKG---------------DMIIT-----GDDYEDSRLI-NGY 232 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~~~W~~~~~---------------~~~~~-----~~~~~~~~~~-~~~ 232 (314)
+..++....+.+|+++.|.|.+.+.| .+.+.|++.+. ..... ..+.. ... +..
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~ 80 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVH--FTSNDVK 80 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEE--ESCSCGG
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceE--EeccCcc
Confidence 34455667899999999999999987 46999998421 11110 11111 111 000
Q ss_pred eeEEEEEEeecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEE--ccccccEeEEEEE-eeccCCCccceE
Q psy15734 233 SCHMTLKIRSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRK--MSRLHMGAYLCIA-SNGVVPSVSHRI 307 (314)
Q Consensus 233 ~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~--~~~~~~g~~~C~a-~~~~~~~~~w~v 307 (314)
....+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...|........ +..++...+.|.+ .+.|.|.+.|..
T Consensus 81 ~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~ 158 (214)
T 3jz7_A 81 SGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQK 158 (214)
T ss_dssp GTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEE
T ss_pred CCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEE
Confidence 01238999999999999999999999998889999999887654443322 3334445799999 889999999964
No 392
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=6.3e-13 Score=93.34 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=71.8
Q ss_pred cCCCCCceec---CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEee
Q psy15734 17 EKPDMPRFAE---PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRD 93 (314)
Q Consensus 17 ~~~~~p~~~~---~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 93 (314)
.+..+|.|.. .+..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+ . ..++.+...+ ....|.|.+
T Consensus 17 ~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g-~~l--------~-~~~~~~~~~~-~~~~L~i~~ 85 (118)
T 2e7c_A 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGG-APL--------D-TSRVHVRTSD-FDTVFFVRQ 85 (118)
T ss_dssp CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETT-EEC--------C-CSSCEEEECS-SEEEEEESS
T ss_pred eeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECC-EEC--------C-CCcEEEEECC-CeEEEEECC
Confidence 3345677754 357889999999999999999999999999954 322 1 2344443322 234799999
Q ss_pred ecCCCCeEEEEEEecC-CCcceeEEEEEEeCC
Q psy15734 94 VQETDRGWYMCQINTV-PMTSQKGYLQVVVPP 124 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p 124 (314)
++.+|+|.|+|.+.|. +.....+.|.|..+|
T Consensus 86 ~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 86 AARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp CCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred CChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 9999999999999775 555666778887765
No 393
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.46 E-value=5e-13 Score=104.11 Aligned_cols=125 Identities=21% Similarity=0.241 Sum_probs=83.4
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC-eee---e------c---CCceeeeEeeCCeeeEEEEEEeecC
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG-DMI---I------T---GDDYEDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~-~~~---~------~---~~~~~~~~~~~~~~~~s~L~i~~~~ 244 (314)
+..++....+.+|+++.|.|.+.+.|.+.+.|++++. ..+ . . ..++.... .. ...+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v~ 79 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SG---TDFTLSINSVE 79 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ET---TEEEEEESSCC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc-CC---CEEEEEECCCC
Confidence 4556777889999999999999999999999997532 111 0 0 12332222 11 13489999999
Q ss_pred CCCCeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEEc----cccccEeEEEEEeec-cCC-Cccce
Q psy15734 245 SHQFGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRKM----SRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~~----~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
.+|+|.|+|.|.|..+.. .....|.|.... .+.+.+... ..++...+.|.+.+. |++ .+.|.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~ 149 (213)
T 3d9a_L 80 TEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWK 149 (213)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred hhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEE
Confidence 999999999999987753 233466665533 333433221 123456799999984 444 68885
No 394
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.46 E-value=1.3e-13 Score=94.82 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=73.1
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.....|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++.. +..+.++.+.... ..+.|.|.+++.
T Consensus 10 ~~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~---------l~~~~~~~~~~~~-~~~~L~I~~v~~ 79 (106)
T 1nct_A 10 KTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQV---------LSTSARHQVTTTK-YKSTFEISSVQA 79 (106)
T ss_dssp CSSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSC---------CTTCSSEEEEECS-SEEEEEECCCCS
T ss_pred CCCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEE---------CCCCCCEEEEECC-CEEEEEECcCCc
Confidence 345678999999999999999999999999988899999995532 2234555555432 234899999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEEE
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
+|+|.|+|.+.|. +.....+.|.|.
T Consensus 80 ~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 80 SDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp SCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred hhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 9999999999765 445555666653
No 395
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.46 E-value=2.5e-13 Score=91.11 Aligned_cols=89 Identities=8% Similarity=0.085 Sum_probs=65.0
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcC-ceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMI-TQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+|.|..++..+.+.+|+.+.|.|.+.+.|.+.+.|++++ +..+. .+ ...... .....|.|.+++.+|+
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~--------~~--~~~~~~-~~~~~L~i~~~~~~D~ 70 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALA--------PE--LLVDAK-SSTTSIFFPSAKRADS 70 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCS--------TT--SEEEEE-TTEEEEECTTBCGGGC
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccC--------Cc--EEEEec-CCEEEEEECCCChhcC
Confidence 588888888999999999999999999999999999965 13221 11 111111 1224799999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEE
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQV 120 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v 120 (314)
|.|+|.+.|. +.....+.|.|
T Consensus 71 G~Y~C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 71 GNYKLKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEEcCCCeEEEEEEEEE
Confidence 9999999875 33344444544
No 396
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.46 E-value=1.2e-12 Score=104.09 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=84.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+.. .+.+|++++|.|.+.+ +.+.+.|+|++............ .. ....|.|.+++.+|+|.|+|.
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~-~~-----~~~~L~I~~v~~~DsG~Y~C~ 78 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPE-RI-----NKVKFYIPDMNSRMAGQYSCI 78 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCT-TC-----CEEEEEECSCCGGGCEEEEEE
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccC-Cc-----ceeEEEecCCCcccCeEEEEE
Confidence 5666665555 7899999999999975 45688999975433221111000 01 123899999999999999999
Q ss_pred EeeCCCC--ceeEEEEEEEe-------------------------------------c-------------CCCeeEEEE
Q psy15734 255 AVNALGE--TDGFIKVYVNL-------------------------------------V-------------DGDIFQIRK 282 (314)
Q Consensus 255 a~n~~g~--~~~~~~l~V~~-------------------------------------~-------------~~~~~~~~~ 282 (314)
+.|..+. .+..+.|.|.. + ....|.|..
T Consensus 79 ~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~ 158 (242)
T 1p6f_A 79 YRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGP 158 (242)
T ss_dssp EEETTEECCCCCCEEEEEECCSCCCEEEEESCSEEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEE
T ss_pred EecCCccccCCcceEEEeecccCCCceEccCCCccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCC
Confidence 9886432 23344444421 0 112356677
Q ss_pred ccccccEeEEEEEeecc--CCCccceEEEEEE
Q psy15734 283 MSRLHMGAYLCIASNGV--VPSVSHRIMVTVH 312 (314)
Q Consensus 283 ~~~~~~g~~~C~a~~~~--~~~~~w~v~l~v~ 312 (314)
+...|.|.|+|.|.+.. ....+-.+.|.|.
T Consensus 159 v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 159 VTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp CCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred CccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 88888899999998763 2344556777765
No 397
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=4.3e-13 Score=94.05 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCC---CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeC-----CceeEEEEEe
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENL---REYKVAWVKMITQTILSIHHKVVTQNKRVSITFN-----DHRSWFLHLR 92 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~---~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~i~ 92 (314)
-|.|+..|..+.+.+|++++|.|.+.+. +.+.|.|||+....+. .....++.+... ....+.|+|.
T Consensus 7 ~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~------~~~~~~~~~~~~~~~~~~~~~~~L~I~ 80 (126)
T 2dav_A 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLA------SKAGKHLQLKETFERHSRVYTFEMQII 80 (126)
T ss_dssp SCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHH------HHTTSSEEEEEEEETTTTEEEEEEEEC
T ss_pred ccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccC------CCCCceEEEccccccccccceEEEEEc
Confidence 3678888999999999999999999764 7899999994211000 001223333210 1123589999
Q ss_pred eecCCCCeEEEEEEecC-CCcceeEEEEEEe
Q psy15734 93 DVQETDRGWYMCQINTV-PMTSQKGYLQVVV 122 (314)
Q Consensus 93 ~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~ 122 (314)
+++.+|+|.|+|.+.+. +..+..+.|.|.+
T Consensus 81 ~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 81 KAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999775 4556778899988
No 398
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=5.1e-13 Score=91.40 Aligned_cols=92 Identities=14% Similarity=0.171 Sum_probs=71.9
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+....+.+|+++.|.|. .+.|.|.+.|++++ ..+....++.+.. .+ ....|.|.++..+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~-~~l~~~~~~~~~~-~~---~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGL-LELRASGKHQPSQ-EG---LTLRLTISALEKADSDTYTCD 81 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESS-CBCCSSSSEEEEE-ET---TEEEEEEESCCTTTCSEEEEE
T ss_pred CCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCC-EECCCCCeEEEEe-CC---CEEEEEECCCCcccCEEEEEE
Confidence 667777778889999999999999 48999999999974 4444445555432 12 134899999999999999998
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.|.....+.|.|...+.+
T Consensus 82 ----~g~~~~~~~l~V~~~p~~ 99 (103)
T 2dku_A 82 ----IGQAQSRAQLLVQGRRSG 99 (103)
T ss_dssp ----CSSCBCCEEEEEECSCCC
T ss_pred ----eCCceEEEEEEEeCccCC
Confidence 677778888988877644
No 399
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.45 E-value=8.9e-13 Score=90.15 Aligned_cols=93 Identities=20% Similarity=0.349 Sum_probs=72.0
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|..++..+.+.+|+++.|.|.+.+.+.+ +.|++++.. ...+.++.+..++. ...|.|.+++.+|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~---------l~~~~~~~~~~~~~-~~~L~I~~v~~~D 74 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNV---------LRPGDKYSLRQEGA-MLELVVRNLRPQD 74 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSB---------CCCSSSEEEEECSS-EEEEEECSCCTTT
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEE---------CCCCCcEEEEEcCC-EEEEEEccCCccc
Confidence 467888888999999999999999999988877 999995432 22344666655432 3479999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+ +.....+.|.|..+|.
T Consensus 75 ~G~Y~C~~---g~~~~~~~l~V~~~p~ 98 (103)
T 2e7b_A 75 SGRYSCSF---GDQTTSATLTVTALPS 98 (103)
T ss_dssp CCCEEEEC---SSCBCCBCEEEECCCC
T ss_pred CEEEEEEE---CCcEEEEEEEEEeccc
Confidence 99999984 3455567788887764
No 400
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.45 E-value=7.1e-13 Score=103.05 Aligned_cols=125 Identities=17% Similarity=0.153 Sum_probs=82.9
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC-ee---eec---------CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG-DM---IIT---------GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~-~~---~~~---------~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
.+.. +....+.+|+++.|.|.+.+.|.+.+.|++++. .. +.. ..++.... .. ....|.|.++
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v 77 (210)
T 1lk3_L 3 VLTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG-SG---TDFTLTIDPV 77 (210)
T ss_dssp CEEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEESSC
T ss_pred cEEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe-cC---CEEEEEECCC
Confidence 3445 677889999999999999999999999998431 11 110 12222221 11 2348999999
Q ss_pred CCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEE----ccccccEeEEEEEeeccCC--Cccce
Q psy15734 244 LSHQFGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRK----MSRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~----~~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
+.+|+|.|+|.|.|..+.. .....|.|.... .+.+.+.. ...++...++|.+.+.+++ .+.|.
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 148 (210)
T 1lk3_L 78 EADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWK 148 (210)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEE
Confidence 9999999999999987643 233456665432 24444322 1234456799999985543 68885
No 401
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=4.9e-13 Score=91.65 Aligned_cols=92 Identities=17% Similarity=0.253 Sum_probs=68.3
Q ss_pred CCCceecCCcc---eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 20 DMPRFAEPVAN---VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 20 ~~p~~~~~~~~---~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
.+|.++..+.. +.+.+|+++.|.|.+.+.+.+ +.|++++ ..+ ..+.++.+...+. ...|.|.+++.
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g-~~~--------~~~~~~~~~~~~~-~~~L~I~~~~~ 74 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDG-QKV--------EESELLVVKMDGR-KHRLILPEAKV 74 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETT-EEC--------CCBTTBEEEEETT-EEEEEESSCCT
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCC-EEC--------CCCCCEEEEeCCC-EEEEEECCCCh
Confidence 46777766666 899999999999999988877 9999954 322 2234555443332 23799999999
Q ss_pred CCCeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 97 TDRGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|+|.|+|.+.|. ...+.|.|.++|.
T Consensus 75 ~D~G~Y~C~a~n~---~~~~~l~V~~~P~ 100 (104)
T 2e6p_A 75 QDSGEFECRTEGV---SAFFGVTVQDPSG 100 (104)
T ss_dssp TTCEEEEEECSSC---CCCEEEEEECCCC
T ss_pred hhCEEEEEEECCc---eEEEEEEEcCCCC
Confidence 9999999999764 3466788877664
No 402
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.45 E-value=1.2e-12 Score=102.43 Aligned_cols=123 Identities=12% Similarity=0.134 Sum_probs=80.6
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCC-Ceeee-----------------cCCceeeeEeeCCeeeEEEEEEe
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDMII-----------------TGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+....+.+|+++.|.|.+.+.| .+.+.|++++ +..+. ...++.+..... ....+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I~ 84 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETS--ATTAYLQIN 84 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGG--GTEEEEEEC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecC--CCEEEEEEC
Confidence 4456789999999999999875 6899999864 22110 012222221110 113589999
Q ss_pred ecCCCCCeEEEEEEeeCCCCc----eeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEee-ccCC-Cccce
Q psy15734 242 SILSHQFGSYRCVAVNALGET----DGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASN-GVVP-SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~----~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~-~~~~-~~~w~ 306 (314)
+++.+|+|.|+|.|.|..+.. ...+.|.|...+ .+.+.... +..++...+.|.+.+ .|.| .++|.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 161 (219)
T 1c1e_H 85 NLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 161 (219)
T ss_dssp SCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEE
Confidence 999999999999999987421 234566666532 23333221 233445579999999 7888 89995
No 403
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.45 E-value=5.5e-13 Score=91.72 Aligned_cols=91 Identities=20% Similarity=0.283 Sum_probs=69.6
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|..++..+.+.+|+++.|.|.+.+.+.+ +.|++++.. + ..+.++.+..++. ...|.|.+++.+|
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~-~--------~~~~~~~~~~~~~-~~~L~I~~v~~~D 74 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVE-V--------RPSKRITISHVGR-FHKLVIDDVRPED 74 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCB-C--------CCCSSCEEEEETT-EEEEEESSCCTTT
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEE-C--------cCCCCEEEEEeCC-EEEEEECCCCcCC
Confidence 467889999999999999999999999887776 999995532 2 2344555554332 2379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEE
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVV 121 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~ 121 (314)
+|.|+|.+.|. .....+.|.|.
T Consensus 75 ~G~Y~C~a~n~-~~~~~~~l~V~ 96 (106)
T 2dlt_A 75 EGDYTFVPDGY-ALSLSAKLNFL 96 (106)
T ss_dssp CSCEEEEEETS-CCCCCBCEEEE
T ss_pred CEEEEEEEccC-CceEEEEEEEE
Confidence 99999999876 44455566665
No 404
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.45 E-value=5.3e-13 Score=103.81 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=82.4
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC--Ce-e-ee---------cCCceeeeEeeCCeeeEEEEEEeec
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK--GD-M-II---------TGDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~--~~-~-~~---------~~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
.+..++ ...+.+|+++.|.|.+. |.+.+.|++.+ .. . +. ...++.... .. ...+|.|.++
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v 75 (211)
T 3tv3_L 3 ALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK-SG---NTASLTVSGL 75 (211)
T ss_dssp CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE-ET---TEEEEEEESC
T ss_pred eEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc-cC---CEEEEEECCC
Confidence 344555 77899999999999999 88999999842 11 1 11 112333222 11 2348999999
Q ss_pred CCCCCeEEEEEEeeCCC--CceeEEEEEEEecC--CCeeEEEEc----cccccEeEEEEEeeccC--CCccce
Q psy15734 244 LSHQFGSYRCVAVNALG--ETDGFIKVYVNLVD--GDIFQIRKM----SRLHMGAYLCIASNGVV--PSVSHR 306 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g--~~~~~~~l~V~~~~--~~~~~~~~~----~~~~~g~~~C~a~~~~~--~~~~w~ 306 (314)
+.+|+|.|+|.|.|..+ .....+.|.|...+ .+.+.+... ..++...+.|.+.+.++ +.+.|.
T Consensus 76 ~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 148 (211)
T 3tv3_L 76 QTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWK 148 (211)
T ss_dssp CGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEE
T ss_pred ChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEE
Confidence 99999999999999887 34556677776322 233433221 13455679999999654 577885
No 405
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.45 E-value=5.1e-13 Score=88.80 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=57.9
Q ss_pred CCCceecCCcceEE--EcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 20 DMPRFAEPVANVTA--TVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 20 ~~p~~~~~~~~~~v--~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
.||.|+.+++.+.+ .+|+++.|.|.+.+ +.+.+.|+|++. . +..+.++.+..++.. ..|.|.+++.+
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~-~--------i~~~~~~~i~~~~~~-~~L~I~~v~~~ 71 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQ-E--------VEESDFVVLENEGPH-RRLVLPATQPS 71 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTS-C--------CCCCSSCEEEEETTE-EEEEESSCCGG
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCE-E--------eeeeeeeeEEecCCe-EEEEeCCCChh
Confidence 35667777766544 58999999999966 777899999553 3 233456665554433 37999999999
Q ss_pred CCeEEEEEEec
Q psy15734 98 DRGWYMCQINT 108 (314)
Q Consensus 98 d~G~Y~C~~~~ 108 (314)
|+|.|+|.+.|
T Consensus 72 D~G~Y~C~a~n 82 (91)
T 2lvc_A 72 DGGEFQCVAGD 82 (91)
T ss_dssp GCSEEEEECSS
T ss_pred hcEEEEEEEcc
Confidence 99999999854
No 406
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.45 E-value=3e-13 Score=93.91 Aligned_cols=95 Identities=15% Similarity=0.255 Sum_probs=67.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecC--CceeEEecCCCeeeecCCc---eeeeEeeC-CeeeEEEEEEeecCCCCC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKGDMIITGDD---YEDSRLIN-GYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~~~~~~~~~---~~~~~~~~-~~~~~s~L~i~~~~~~d~ 248 (314)
+|.|...+....+.+|+++.|.|.+.+.| .+.+.|++++.. +..... .+.....+ .....+.|.|.++..+|+
T Consensus 10 ~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 10 XPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEA-LQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp SCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEE-CTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcc-cccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 56777777777899999999999999654 589999997533 222110 01100000 111235999999999999
Q ss_pred eEEEEEEeeCCCC-ceeEEEEEE
Q psy15734 249 GSYRCVAVNALGE-TDGFIKVYV 270 (314)
Q Consensus 249 G~Y~C~a~n~~g~-~~~~~~l~V 270 (314)
|.|+|.|.|..|. .+..+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999997 457777765
No 407
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.6e-13 Score=93.63 Aligned_cols=92 Identities=22% Similarity=0.253 Sum_probs=68.7
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCc----CEEEEeCCceeEEEEEeee
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNK----RVSITFNDHRSWFLHLRDV 94 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~L~i~~~ 94 (314)
..+|.|..++..+.+.+|+++.|.|.+.+.+ +.+.|++++. .+. .+. ++.+..++. ...|.|.++
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~-~i~--------~~~~~~~~~~~~~~~~-~~~L~I~~~ 74 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGV-ELT--------REDSFKARYRFKKDGK-RHILIFSDV 74 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSC-BCC--------CSCCSSCCCEEEECSS-EEEEECSSC
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCE-ECC--------CCCCcceeEEEEECCC-EEEEEECCC
Confidence 4568888889999999999999999998877 8999999553 221 122 445554432 347999999
Q ss_pred cCCCCeEEEEEEecCCCcceeEEEEEEeCC
Q psy15734 95 QETDRGWYMCQINTVPMTSQKGYLQVVVPP 124 (314)
Q Consensus 95 ~~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p 124 (314)
+.+|+|.|+|.+.+ ......|.|..+|
T Consensus 75 ~~~D~G~Y~C~a~n---~~~~~~l~V~~~P 101 (101)
T 2edk_A 75 VQEDRGRYQVITNG---GQCEAELIVEEKQ 101 (101)
T ss_dssp CGGGCSBEEEECSS---CEECCBEEEECCC
T ss_pred ChhhCEEEEEEEcC---CcEEEEEEEeCCC
Confidence 99999999999965 3344566666554
No 408
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.45 E-value=1.3e-13 Score=112.59 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=70.5
Q ss_pred ceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc-e
Q psy15734 185 EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET-D 263 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~-~ 263 (314)
..+.+|+++.|.|.+. .|.|.+.|++.+...... . ...... .+. ..+|+|.|+|.|.|..+.. +
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~-~----~~~~~~-----~~~----~~~d~G~Y~C~a~n~~~~~~s 169 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALP-V----PYDHQR-----GFS----GIFEDRSYICKTTIGDREVDS 169 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCC-C----CEETTT-----EEE----ECCCSSEEEEEEEETTEEEEC
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccc-e----eecCCc-----Cee----eeccCcEEEEEEEeCCceeee
Confidence 4578899999999999 788889888864222211 0 001111 111 3579999999999877654 3
Q ss_pred eEEEEEEEecCCCeeEEE----EccccccEeEEEEEeeccCCCccce
Q psy15734 264 GFIKVYVNLVDGDIFQIR----KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 264 ~~~~l~V~~~~~~~~~~~----~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
..+.|.|.....+.+.+. .+..++...+.|.+.+.|.|.+.|.
T Consensus 170 ~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~ 216 (289)
T 3mjg_X 170 DAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWT 216 (289)
T ss_dssp CCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEE
T ss_pred eeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEE
Confidence 445666665333334333 2334555679999999999999997
No 409
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=1.4e-13 Score=96.21 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=71.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
++.|...+....+.+|+++.|.|.+.|.|.|.+.|+++ +..+....++.+....++ ...|.|.++..+|+|.|+|.
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~ 88 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLD-KTPLHANELNEIDAQPGG---YHVLTLRQLALKDSGTIYFE 88 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEES-SCEECCSSSCCBCCBTTT---BCCBEECSCCTTTCEEEEEE
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEEC-CEECCCCCcEEEEEcCCC---EEEEEEcCCChhhCEEEEEE
Confidence 44666777888999999999999999999999999997 444444545444322121 23899999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecC
Q psy15734 255 AVNALGETDGFIKVYVNLVD 274 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~ 274 (314)
+ |.....+.|.|..+|
T Consensus 89 ~----g~~~~~~~L~V~~~p 104 (115)
T 2cr6_A 89 A----GDQRASAALRVTEKP 104 (115)
T ss_dssp E----TTEECCEEEEEECCS
T ss_pred E----CCeeEEEEEEEECCC
Confidence 4 667777888888765
No 410
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.45 E-value=8.1e-13 Score=104.92 Aligned_cols=127 Identities=15% Similarity=0.146 Sum_probs=87.1
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecC----CceeEEecCCC-e---eeec---------CCceeeeEeeCCeeeEEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFP----ASLNYWTNEKG-D---MIIT---------GDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p----~p~~~W~~~~~-~---~~~~---------~~~~~~~~~~~~~~~~s~L~ 239 (314)
.+..++....+.+|+++.|.|.+.+.| .+.+.|++++. . .+.. ..++.+.. .. ...+|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~ 78 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG-SR---TDFTLI 78 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEE
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe-cC---CeEEEE
Confidence 455667778899999999999999998 88999998531 1 1111 12333221 11 134899
Q ss_pred EeecCCCCCeEEEEEEeeCCCC-ceeEEEEEEEecCC---CeeEE-----EEccccccEeEEEEEeeccC--CCccceE
Q psy15734 240 IRSILSHQFGSYRCVAVNALGE-TDGFIKVYVNLVDG---DIFQI-----RKMSRLHMGAYLCIASNGVV--PSVSHRI 307 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~---~~~~~-----~~~~~~~~g~~~C~a~~~~~--~~~~w~v 307 (314)
|.+++.+|+|.|+|.|.|..+. ......|.|...+. +.+.+ ..+..++...+.|.+.+.+. +.+.|.-
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k 157 (240)
T 1moe_A 79 IDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVK 157 (240)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred EcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEE
Confidence 9999999999999999998664 34556677766431 21221 13445566679999998873 5899965
No 411
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.44 E-value=2.9e-13 Score=91.14 Aligned_cols=83 Identities=19% Similarity=0.273 Sum_probs=65.6
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
++....+.+|+++.|.|.+.+ .|.+.|+++ +..+....++.. .++ .|.|.++..+|+|.|+|.|.|..|
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~-g~~~~~~~~~~~---~~~-----~L~i~~~~~~D~G~Y~C~a~n~~g 75 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKD-GVHLGPNNRTVL---IGE-----YLQIKGATPRDSGLYACTAARTVD 75 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEET-TEEECCCSSEEE---ETT-----EEEECSCCGGGCEEEEEEEECSSC
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEEC-CEECCCCceEEE---eCC-----EEEECcCCcccCEEEEEEEccCCC
Confidence 456677899999999999987 579999996 444444443332 234 899999999999999999999999
Q ss_pred CceeEEEEEEEecC
Q psy15734 261 ETDGFIKVYVNLVD 274 (314)
Q Consensus 261 ~~~~~~~l~V~~~~ 274 (314)
.....+.|.|..+.
T Consensus 76 ~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 76 SETWIFMVNVTDAA 89 (95)
T ss_dssp EEEEEEEEEECCC-
T ss_pred cEEEEEEEEEeCCc
Confidence 88888888887654
No 412
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.44 E-value=9.6e-13 Score=104.21 Aligned_cols=126 Identities=18% Similarity=0.207 Sum_probs=83.2
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCe---e-eec---------CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGD---M-IIT---------GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~---~-~~~---------~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
.+...+....+.+|+++.|.|.+.+.|.+.+.|++.+.. . +.. ..++.... .. ...+|.|.++
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v 101 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SG---TDFTLTISSL 101 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEESSC
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc-CC---CEEEEEECCC
Confidence 444556667899999999999999999999999984311 1 110 12333221 11 2358999999
Q ss_pred CCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEEc----cccccEeEEEEEeeccC--CCccce
Q psy15734 244 LSHQFGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRKM----SRLHMGAYLCIASNGVV--PSVSHR 306 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~~----~~~~~g~~~C~a~~~~~--~~~~w~ 306 (314)
+.+|+|.|+|.+.|..+.. .....|.|.... .+.+.+... ..++...++|.+.+.++ +.+.|.
T Consensus 102 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~ 172 (237)
T 3sob_L 102 QPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWK 172 (237)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEE
T ss_pred ChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEE
Confidence 9999999999999877532 334456665532 333333221 12344679999999654 789995
No 413
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=87.27 Aligned_cols=89 Identities=20% Similarity=0.357 Sum_probs=65.8
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCC-CceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENL-REYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~-~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
.+..++..+.+.+|+++.|.|.+.+. |.+.+.|++++. . +..+.++.+...+ ....|.|.+++.+|+|.
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~-~--------~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~ 72 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVR-Q--------LENSEKYEITYED-GVAILYVKDITKLDDGT 72 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTE-E--------CCSSSSEEEEEET-TEEEEEECSCCGGGCEE
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCE-E--------CcCCCCEEEEEcC-CeEEEEEecCChhhCeE
Confidence 45567888999999999999999996 889999999543 2 2234455554332 23479999999999999
Q ss_pred EEEEEecC-CCcceeEEEEEE
Q psy15734 102 YMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 102 Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
|+|.+.|. +.....+.|.|.
T Consensus 73 Y~C~a~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 73 YRCKVVNDYGEDSSYAELFVK 93 (97)
T ss_dssp EEEEEECSSCEEEEEEEEEET
T ss_pred EEEEEECCCCeEeEEEEEEEE
Confidence 99999775 444444555553
No 414
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.44 E-value=6.9e-13 Score=91.56 Aligned_cols=91 Identities=16% Similarity=0.237 Sum_probs=69.3
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
||.|...+....+.+|+++.|.|.+.+. |.+.|++++. .+....++.+..... .+.|.|.+++.+|+|.|+|.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~-~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~ 80 (108)
T 2dm7_A 8 PARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPE-TLRDGGRYSLKQDGT----RCELQIHDLSVADAGEYSCM 80 (108)
T ss_dssp CCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSS-BCCSSSSCEEEEETT----EEEEEESSCCTTTCSEEEEE
T ss_pred CCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCE-ECCCCCCEEEEecCC----EEEEEECCCCcccCEEEEEE
Confidence 6777777788899999999999999875 6899999744 444445555432221 34799999999999999999
Q ss_pred EeeCCCCceeEEEEEEEecCCC
Q psy15734 255 AVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 255 a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
|.| ....+.|.|..+|..
T Consensus 81 a~n----~~~~~~l~V~~~p~~ 98 (108)
T 2dm7_A 81 CGQ----ERTSATLTVRALPAR 98 (108)
T ss_dssp ETT----EEEEEECEEECCCSS
T ss_pred EcC----CEEEEEEEEecCCHH
Confidence 944 567788888876543
No 415
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.43 E-value=1.5e-12 Score=103.84 Aligned_cols=127 Identities=14% Similarity=0.103 Sum_probs=83.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC---------------eeeecC---CceeeeEeeCCeeeEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG---------------DMIITG---DDYEDSRLINGYSCHMTL 238 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~---------------~~~~~~---~~~~~~~~~~~~~~~s~L 238 (314)
.+..++....+.+|+++.|.|.+.+.|.+.+.|++... ...... .++.+..... ...+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~L 79 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASL---TLSTL 79 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEET---TEEEE
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCC---CEEEE
Confidence 45566777889999999999999999999999998211 101111 2233222111 23589
Q ss_pred EEeecCCCCCeEEEEEEeeCCCC----ceeEEEEEEEec----CCCeeEEEEc-----cccccEeEEEEEeeccCC--Cc
Q psy15734 239 KIRSILSHQFGSYRCVAVNALGE----TDGFIKVYVNLV----DGDIFQIRKM-----SRLHMGAYLCIASNGVVP--SV 303 (314)
Q Consensus 239 ~i~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~----~~~~~~~~~~-----~~~~~g~~~C~a~~~~~~--~~ 303 (314)
.|.+++.+|+|.|+|.|.|..+. ......|.|... ..+.+.+... ..++...+.|.+.+.+++ .+
T Consensus 80 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v 159 (246)
T 4dzb_B 80 TVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 159 (246)
T ss_dssp EECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEE
Confidence 99999999999999999986541 224456777641 1233333221 124556799999998765 78
Q ss_pred cce
Q psy15734 304 SHR 306 (314)
Q Consensus 304 ~w~ 306 (314)
.|.
T Consensus 160 ~W~ 162 (246)
T 4dzb_B 160 SWW 162 (246)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 416
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=2.3e-12 Score=88.66 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=70.1
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeee--eeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHH--KVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
..+|.|..++.++.+.+|+++.|.|.+.+ .+.+.|++++ ..+..... .......++.+..++.. .+|.|.+++.
T Consensus 6 ~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG-~~l~~~~~~~~~~~~~~r~~i~~~g~~-~~L~I~~v~~ 81 (112)
T 2e6q_A 6 SGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNG-EELKSNEPEGQVEPGALRYRIEQKGLQ-HRLILHAVKH 81 (112)
T ss_dssp CSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESS-CBCCSSCCCTTSCTTSCEEEECCBTTE-EEEEEESCCS
T ss_pred cCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECC-EECccCcccccccccccEEEEEeCCcE-EEEEECCCCH
Confidence 45678999999999999999999999987 6689999954 43321100 00000005555544333 3799999999
Q ss_pred CCCeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 97 TDRGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|+|.|+|...+ .....+.|.|..+|.
T Consensus 82 ~D~G~Y~~~~~~--~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 82 QDSGALVGFSCP--GVQDSAALTIQESSG 108 (112)
T ss_dssp TTCSEEEEEEET--TEEEEEEEEEECSSC
T ss_pred HHCccEEEEEEC--CeeEEEEEEEeCCCc
Confidence 999999875432 334577888887764
No 417
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.43 E-value=9.8e-13 Score=95.96 Aligned_cols=93 Identities=15% Similarity=0.165 Sum_probs=68.9
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeee-------ecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMI-------ITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
.+....+.+|++++|.|.+.+.|.+.+.|++.+...+ ....++....... ...+|.|.+++.+|+|.|+|
T Consensus 44 ~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~---~~~~L~I~~v~~~DsG~Y~C 120 (145)
T 1z9m_A 44 WTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTP---HELSISISNVALADEGEYTC 120 (145)
T ss_dssp BCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSCCTTEEEEEECS---SEEEEEECSCCGGGCEEEEE
T ss_pred CCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecccCCEEEecCCC---CeEEEEECCCChhhCEEEEE
Confidence 4556778999999999999999999999996432222 1123333222111 13489999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecCCCe
Q psy15734 254 VAVNALGETDGFIKVYVNLVDGDI 277 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~~~ 277 (314)
.|.|. |.....+.|.|..+|.++
T Consensus 121 ~~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 121 SIFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp EECSS-SCEEEEEEEEEECCCC--
T ss_pred EEEcC-CCceEEEEEEEEeCCCCC
Confidence 99999 888899999998876554
No 418
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.43 E-value=1.6e-12 Score=94.78 Aligned_cols=103 Identities=19% Similarity=0.361 Sum_probs=76.8
Q ss_pred CceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeE
Q psy15734 22 PRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 22 p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 101 (314)
..+...+..+.+.+|++++|.|.+.+.+.+.+.|++.+...+.. .......+.|+.+.......++|.|.+++.+|+|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~-~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 117 (145)
T 1z9m_A 39 DDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYF-GEKRALRDNRIQLVTSTPHELSISISNVALADEGE 117 (145)
T ss_dssp CTTCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEE-TTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEE
T ss_pred cceecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEE-CCceecccCCEEEecCCCCeEEEEECCCChhhCEE
Confidence 34556788899999999999999988888899999755444322 11122334677665544455689999999999999
Q ss_pred EEEEEecCCCcceeEEEEEEeCCc
Q psy15734 102 YMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 102 Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
|+|.+.+.+.....+.|.|.++|.
T Consensus 118 Y~C~~~n~~~~~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 118 YTCSIFTMPVRTAKSLVTVLGIPQ 141 (145)
T ss_dssp EEEEECSSSCEEEEEEEEEECCCC
T ss_pred EEEEEEcCCCceEEEEEEEEeCCC
Confidence 999997765556677888887764
No 419
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.43 E-value=1.1e-12 Score=102.07 Aligned_cols=124 Identities=16% Similarity=0.168 Sum_probs=81.6
Q ss_pred EEcCCCcceeecCccEEEEEEEeecC---CceeEEecCCC-eee---e---------cCCceeeeEeeCCeeeEEEEEEe
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFP---ASLNYWTNEKG-DMI---I---------TGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p---~p~~~W~~~~~-~~~---~---------~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+.. +....+.+|+++.|.|.+.+.| .+.+.|++++. ..+ . ...++.... .. ....|.|.
T Consensus 4 v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~ 78 (212)
T 1q0x_L 4 VTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL-IG---DKAALTIT 78 (212)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEES
T ss_pred EEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe-eC---CEEEEEEC
Confidence 444 6777899999999999999988 48999998531 111 1 012222221 11 13489999
Q ss_pred ecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec--CCCeeEEEEc----cccccEeEEEEEeeccCC--Cccce
Q psy15734 242 SILSHQFGSYRCVAVNALGET-DGFIKVYVNLV--DGDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~--~~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
+++.+|+|.|.|.|.|..+.. .....|.|... ..+.+.+... ..++...+.|.+.+.+++ .+.|.
T Consensus 79 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 152 (212)
T 1q0x_L 79 GAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWK 152 (212)
T ss_dssp SCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEE
Confidence 999999999999999987632 23445666432 2344443221 133456799999997655 78895
No 420
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.43 E-value=3.3e-13 Score=104.96 Aligned_cols=115 Identities=11% Similarity=0.077 Sum_probs=82.1
Q ss_pred eecCccEEEEEEEeec-CCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCceeE
Q psy15734 187 AFVSQTVELHCHTEAF-PASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDGF 265 (314)
Q Consensus 187 v~~g~~~~l~C~~~g~-p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 265 (314)
...++.+.|.|.+.+. |.+.+.|+++ +..+....++.+....+ ...|.|.++..+|+|.|+|.|.|..|.....
T Consensus 14 ~c~~~~~~l~C~~~~~~p~~~i~W~~~-g~~i~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~ 88 (212)
T 2r15_A 14 QSTAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGE----QIWLQINEPTPNDKGKYVMELFDGKTGHQKT 88 (212)
T ss_dssp EECSSEEEEEEEBSSCCSSCEEEEEET-TEECCCCSSEEEEEETT----EEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred EEcCceEEEEEEEeccCCCceEEEEEC-CEEccCCCeEEEEEeCC----EEEEEECCCCcccCEEEEEEEecCCcceEEE
Confidence 3467788888888885 5899999997 44454555555433222 2479999999999999999999988877777
Q ss_pred EEEEEEe------------------cCCCeeEE-----EEccccccEeEEEEEeeccCCCccce
Q psy15734 266 IKVYVNL------------------VDGDIFQI-----RKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 266 ~~l~V~~------------------~~~~~~~~-----~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
+.|.|.. .+.+.+.. ..+..++...+.|.+.+.|.|.+.|.
T Consensus 89 ~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~ 152 (212)
T 2r15_A 89 VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWL 152 (212)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEE
T ss_pred EEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEE
Confidence 7765532 11122221 23445566679999999999999995
No 421
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.43 E-value=3.5e-11 Score=93.79 Aligned_cols=166 Identities=14% Similarity=0.173 Sum_probs=96.5
Q ss_pred eecCCcceEEEcCCcEEEEEEecC-CC---ceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 24 FAEPVANVTATVGKEALMACVVEN-LR---EYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 24 ~~~~~~~~~v~~g~~~~l~C~~~~-~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
+...|....+..|+.++|.|.+.+ .| +..+.|+|++ ..+ ... ...|.|..+...|+
T Consensus 5 Vs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG-~~I--------sGa-----------T~tLti~s~t~sdS 64 (304)
T 3shs_A 5 VSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDD-QPH--------ENN-----------TATLTVADATSENA 64 (304)
T ss_dssp EEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETT-EEC--------SCC-----------SSEEEESSCCGGGC
T ss_pred EEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECC-ccc--------cCC-----------cceEEeeeccccCC
Confidence 334566677889999999999854 45 5799999954 321 101 11699999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEEeCCce-eeecCcceeEEecCceEEEEEEe--cc-cCCCceEEEcCCCceeecCCeeC
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVVVPPRI-LLDRTSTDVVVREGTEVTLECSA--VG-YPEPYVAWRREDGKAINYNGELV 174 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~~~p~~-~~~~~~~~~~~~~g~~~~l~C~~--~~-~p~p~~~W~~~~~~~~~~~~~~~ 174 (314)
|.|+|.+.+. +.......+.|...+.+ .....+....+..|..+.|.+.+ .| .|+.
T Consensus 65 G~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA------------------- 125 (304)
T 3shs_A 65 GSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPA------------------- 125 (304)
T ss_dssp EEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSS-------------------
T ss_pred eEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcc-------------------
Confidence 9999999664 33322223333332221 11112333334445556665554 22 2210
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
..+..++.|+++++. +. +.. .|.+......++|.|+|+
T Consensus 126 --------------------------~~~~yTYQWyKngt~-Is-gAq--------------~lT~sS~TateaG~YtV~ 163 (304)
T 3shs_A 126 --------------------------DNYELHYSWSKGEDV-ID-TTQ--------------DITIQEFTADKNGVYTVK 163 (304)
T ss_dssp --------------------------TTCCCEEEEEETTEE-EE-SSS--------------EEEECSCCGGGCEEEEEE
T ss_pred --------------------------cCCCceeEEeeCCeE-cc-Ccc--------------ccceeeEEecCCeEEEEE
Confidence 001234555554332 21 111 677888888999999999
Q ss_pred EeeCCCCc--eeEEEEEE
Q psy15734 255 AVNALGET--DGFIKVYV 270 (314)
Q Consensus 255 a~n~~g~~--~~~~~l~V 270 (314)
+.|..+.. +.++.+.+
T Consensus 164 VTn~~~~c~~s~~~~i~~ 181 (304)
T 3shs_A 164 VWGESEDSAASASTKIML 181 (304)
T ss_dssp EESSSGGGCEEEEEEEEE
T ss_pred EEcCCCCcccccceEEEE
Confidence 99987633 44444433
No 422
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.43 E-value=7.2e-13 Score=90.03 Aligned_cols=94 Identities=20% Similarity=0.240 Sum_probs=69.7
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
.+|.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++ ..+. ...+.++.+...+. ...|.|.+++.+|+
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~-~~~~------~~~~~~~~~~~~~~-~~~L~i~~v~~~D~ 75 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG-RKIH------SQEQGRFHIENTDD-LTTLIIMDVQKQDG 75 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETT-EECC------TTGGGTEEEEECSS-EEEEEESSCCGGGC
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECC-EEee------cCCCCEEEEEecCC-EEEEEEeecCcccC
Confidence 3577778888999999999999999998888999999954 3221 11344666655432 34899999999999
Q ss_pred eEEEEEEecC-CCcceeEEEEEE
Q psy15734 100 GWYMCQINTV-PMTSQKGYLQVV 121 (314)
Q Consensus 100 G~Y~C~~~~~-~~~~~~~~l~v~ 121 (314)
|.|+|.+.|. +.....+.|.|.
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 76 GLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEeCCCcEEEEEEEEEE
Confidence 9999999775 334445555553
No 423
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.43 E-value=6.6e-12 Score=95.13 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=79.5
Q ss_pred ecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEE
Q psy15734 25 AEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMC 104 (314)
Q Consensus 25 ~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 104 (314)
...|..+.|.+|+++.|.|.+....+..+.|--.-+... . ..+.....+.|.+++ +|.+.|.|
T Consensus 6 ~v~P~~~~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~-------~---------~~g~~~~~~~ls~vs-~d~~~~~C 68 (196)
T 3bn3_B 6 DLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNG-------T---------QRGLRWLARQLVDIR-EPETQPVC 68 (196)
T ss_dssp EEESSEEEEETTEEEEEEEEECCSSCSEEEEECSSEEEE-------E---------EEETTEEEEEEEEEC-SSEECCEE
T ss_pred EEcCCCcEEcCCCeEEEEEeCCCCCCCccEEEEccCCee-------E---------ccccCceEEEEEEEc-cCCCceEE
Confidence 344567889999999999999643333677743211111 0 001111248889999 88888999
Q ss_pred EEecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEeccc-CCCc--eEEEc
Q psy15734 105 QINTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGY-PEPY--VAWRR 161 (314)
Q Consensus 105 ~~~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~-p~p~--~~W~~ 161 (314)
.+... ......+.|.|+.+|........ ...+.+|+.++|.|.+.+. |... +.|++
T Consensus 69 ~~~c~~~~~~~~v~l~Vy~~P~~v~i~~~-~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlk 128 (196)
T 3bn3_B 69 FFRCARRTLQARGLIRTFQRPDRVELMPL-PPWQPVGENFTLSCRVPGAGPRASLTLTLLR 128 (196)
T ss_dssp EEEETTEEEEEECEEEEEBCCCCCEECCC-CSSEETTSEEEEEEEETTCBCGGGEEEEEEE
T ss_pred EEECCCCceEEEEEEEEecCCCcCEEccC-CccccCCCcEEEEEEeCCccCCCCcEEEEEe
Confidence 98654 34466778899988876544322 2236789999999999875 5544 79998
No 424
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.43 E-value=4.8e-13 Score=101.38 Aligned_cols=114 Identities=16% Similarity=0.181 Sum_probs=79.9
Q ss_pred CcceeecCccEEEEEEEe--ecCCceeEEec--CCCeee---------ecCCceeeeEeeCCeeeEEEEEEeecCCCCCe
Q psy15734 183 QLEGAFVSQTVELHCHTE--AFPASLNYWTN--EKGDMI---------ITGDDYEDSRLINGYSCHMTLKIRSILSHQFG 249 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~--g~p~p~~~W~~--~~~~~~---------~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 249 (314)
..+...+|++++|.|... +.|.+.+.|++ ++..+. ....++. ...++ +|.|.+++.+|+|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~--~~~ng-----sL~I~~v~~~DsG 79 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK--LFKNG-----TLKIKHLKTDDQD 79 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEE--ECTTS-----CEEECSCCGGGCE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEE--ECCCC-----CEEECCCChhhCE
Confidence 345678999999999553 35678999999 644321 1222332 33555 9999999999999
Q ss_pred EEEEEEeeCCCCce--eEEEEEEEecCC-CeeEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 250 SYRCVAVNALGETD--GFIKVYVNLVDG-DIFQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 250 ~Y~C~a~n~~g~~~--~~~~l~V~~~~~-~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
.|+|.|.|..|... ..+.|.|..... +.+.. . .....++|.|.+.+.+.++|..
T Consensus 80 ~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~-~---~~~v~L~C~~~~~p~~~~~W~~ 136 (182)
T 1hnf_A 80 IYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW-T---CINTTLTCEVMNGTDPELNLYQ 136 (182)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE-E---TTTTEEEEECSSCSSCEEEEEE
T ss_pred EEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE-c---cCcEEEEeEccCCCCCEEEEEE
Confidence 99999999988763 567788876432 33322 1 1135799999988888899853
No 425
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=4.1e-13 Score=93.06 Aligned_cols=99 Identities=22% Similarity=0.258 Sum_probs=69.4
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCC---CceEEEEEEcCceeEEEeeeeeeecCcCEEEEe--CC---ceeEEEE
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENL---REYKVAWVKMITQTILSIHHKVVTQNKRVSITF--ND---HRSWFLH 90 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~---~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~L~ 90 (314)
...+.|+..|..+.+.+|++++|.|.+.+. +.+.|.|||+....+.. ....++.+.. .. ...+.|+
T Consensus 10 ~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~------~~~~~~~~~~~~~~~~~~~~~~L~ 83 (118)
T 2edn_A 10 EPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGS------KSGARFSFKESHNSASNVYTVELH 83 (118)
T ss_dssp CCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCC------STTSSCEEEEEECSSSCEEEEEEE
T ss_pred CCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCC------CCccEEEeccccccccccceEEEE
Confidence 345678888999999999999999999764 67899999943111100 0122333321 11 1235899
Q ss_pred EeeecCCCCeEEEEEEecC-CCcceeEEEEEEeC
Q psy15734 91 LRDVQETDRGWYMCQINTV-PMTSQKGYLQVVVP 123 (314)
Q Consensus 91 i~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~ 123 (314)
|.+++.+|+|.|+|.+.+. +..+..+.|.|.++
T Consensus 84 I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 84 IGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp ESSCCTTTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred EeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999775 55566777887764
No 426
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.43 E-value=6.4e-13 Score=89.42 Aligned_cols=89 Identities=17% Similarity=0.220 Sum_probs=66.7
Q ss_pred cCCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 17 EKPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 17 ~~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
....+|.|...+..+.+.+|+++.|.|.+.+.+ +.+.|++++ ..+ ..+.++.+.. ..|.|.+++.
T Consensus 5 ~~~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g-~~~--------~~~~~~~~~~-----~~L~i~~~~~ 69 (95)
T 2ckn_A 5 EQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDG-VQL--------VESNRTRITG-----EEVEVRDSIP 69 (95)
T ss_dssp TSSCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTT-BCC--------CCCSSEEECS-----SEEEESSCCG
T ss_pred CCCCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECC-Eec--------CCCCCEEEeC-----CEEEECCCCh
Confidence 345678888889999999999999999999877 699999944 322 2234544431 2799999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEE
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQV 120 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v 120 (314)
+|+|.|+|.+.|. +.....+.|.|
T Consensus 70 ~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 70 ADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp GGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred HHCEEEEEEeccCCCcEEEEEEEEE
Confidence 9999999999775 33344444444
No 427
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.43 E-value=1.6e-13 Score=109.60 Aligned_cols=125 Identities=15% Similarity=0.129 Sum_probs=83.2
Q ss_pred cCCCcceeecCccEEEEEEEeecCCce-----eEEecCCCeeee-------cCC-------ceeeeEeeCCeeeEEEEEE
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAFPASL-----NYWTNEKGDMII-------TGD-------DYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~p~p~-----~~W~~~~~~~~~-------~~~-------~~~~~~~~~~~~~~s~L~i 240 (314)
.++....+.+|+++.|.|.+.|.|.+. +.|++++..... ... +..+.. ........+|.|
T Consensus 8 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sL~I 86 (248)
T 3pv7_A 8 MAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSP-WRLKSGDASLRL 86 (248)
T ss_dssp STTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCH-HHHTTTBCCEEE
T ss_pred eCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEe-ccCCCCcEEEEe
Confidence 355666889999999999999998876 999986432110 000 000000 000011236999
Q ss_pred eecCCCCCeEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEc---cccccEeEEEEEee-ccCC-CccceE
Q psy15734 241 RSILSHQFGSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKM---SRLHMGAYLCIASN-GVVP-SVSHRI 307 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~---~~~~~g~~~C~a~~-~~~~-~~~w~v 307 (314)
.+++.+|+|.|+|.+.|..+.....+.|.|..+| .+.+... ..+....++|.+.+ .|.| .+.|..
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P--~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k 156 (248)
T 3pv7_A 87 PGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP--ASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEK 156 (248)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC--EEEEECC--------CEEEEEEEEEBSSCCEEEEEE
T ss_pred CCCCHHHCeEEEEEEEeCCccceeEEEEEEecCC--ceEEecCCccccCCCcEEEEEEccEECCCeEEEEEE
Confidence 9999999999999999998888888888888754 3333221 12233459999999 6777 899974
No 428
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.42 E-value=4.6e-12 Score=98.15 Aligned_cols=86 Identities=19% Similarity=0.312 Sum_probs=60.9
Q ss_pred ceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCc-e---eEEE-eeeeeeecCcCEEEEeC-CceeEEEEEeeecC
Q psy15734 23 RFAEPVANVTATVGKEALMACVVENLREYKVAWVKMIT-Q---TILS-IHHKVVTQNKRVSITFN-DHRSWFLHLRDVQE 96 (314)
Q Consensus 23 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~-~---~~~~-~~~~~~~~~~~~~~~~~-~~~~~~L~i~~~~~ 96 (314)
.+...+..+.+.+|++++|.|.+.+.....+.|||... . .+.. .........+|+.+..+ ....+.|.|.+++.
T Consensus 5 ~v~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 84 (210)
T 2eys_A 5 QVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQL 84 (210)
T ss_dssp CEEEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCG
T ss_pred eEEEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCc
Confidence 34555778999999999999999776556899999642 1 2221 11011123567777643 34457899999999
Q ss_pred CCCeEEEEEEec
Q psy15734 97 TDRGWYMCQINT 108 (314)
Q Consensus 97 ~d~G~Y~C~~~~ 108 (314)
+|+|.|.|.+.+
T Consensus 85 ~Dsg~Y~C~~~~ 96 (210)
T 2eys_A 85 SDSASYICVVSD 96 (210)
T ss_dssp GGCEEEEEEEES
T ss_pred ccCceEEEEEEc
Confidence 999999999865
No 429
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.42 E-value=2.1e-12 Score=86.82 Aligned_cols=88 Identities=19% Similarity=0.286 Sum_probs=66.2
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCC
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDR 99 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 99 (314)
..|.|..++..+.+.+|+++.|.|.+ +.+.+.+.|++++. .+ ..+.++.+..++. ...|.|.+++.+|+
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~-~l--------~~~~~~~~~~~~~-~~~L~I~~v~~~D~ 75 (95)
T 2k1m_A 7 PVSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGS-DI--------SASNKYGLATEGT-RHTLTVREVGPADQ 75 (95)
T ss_dssp CCCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSS-EE--------CSSTTCEEEEETT-EEEEEESSCCTTCC
T ss_pred CCCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCE-EC--------CCCCcEEEEEcCC-EEEEEEcCCCcccC
Confidence 45788888999999999999999999 66788999999543 22 2344555554433 33799999999999
Q ss_pred eEEEEEEecCCCcceeEEEEEE
Q psy15734 100 GWYMCQINTVPMTSQKGYLQVV 121 (314)
Q Consensus 100 G~Y~C~~~~~~~~~~~~~l~v~ 121 (314)
|.|+|.+ +.....+.|.|.
T Consensus 76 G~Y~C~a---g~~~~~~~l~V~ 94 (95)
T 2k1m_A 76 GSYAVIA---GSSKVKFDLKVI 94 (95)
T ss_dssp SEEEEEE---TTEEEEEEEEEE
T ss_pred EEEEEEE---CCceEEEEEEEe
Confidence 9999999 334445566654
No 430
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=6.8e-13 Score=90.78 Aligned_cols=87 Identities=14% Similarity=0.127 Sum_probs=62.1
Q ss_pred CCeEEcCCCc-ceeecCccEEEEEEEeecCCceeEEecCCCeeeecC-CceeeeEeeCCeeeEEEEEEeecCCCCCeEEE
Q psy15734 175 PPMLTIPNQL-EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG-DDYEDSRLINGYSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 175 ~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
+|.|...+.. ..+.+|+++.|.|.+ +.|.+.+.|++++.. +... .++.+....+ ...|.|.++..+|+|.|+
T Consensus 15 ~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~-l~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 15 STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQE-IQMSGSKYIFESIGA----KRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp TSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSE-ECCCSSSSEEEEETT----EEEEEECSCSSSSCEEEE
T ss_pred CCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEE-CCCCCCeEEEEecCC----EEEEEECCCCcccCEEEE
Confidence 4444444433 789999999999999 799999999997544 4333 4555432221 348999999999999999
Q ss_pred EEEeeCCCCceeEEEEEEE
Q psy15734 253 CVAVNALGETDGFIKVYVN 271 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V~ 271 (314)
|.|.| ...+..|.|.
T Consensus 89 C~a~~----~~~~~~l~V~ 103 (104)
T 1pd6_A 89 CVVGG----EKCSTELFVK 103 (104)
T ss_dssp EEETT----EEECCEEEEE
T ss_pred EEECC----CcEEEEEEEe
Confidence 99933 4455555553
No 431
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.42 E-value=1.4e-12 Score=104.00 Aligned_cols=123 Identities=14% Similarity=0.123 Sum_probs=81.5
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCCC-e-e--ee--------------cCCceeeeEeeCCeeeEEEEEEee
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-D-M--II--------------TGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~-~--~~--------------~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
....+.+|++++|.|.+.+.| .+.+.|++.+. . . +. ...++.+...... ...+|.|.+
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~L~I~~ 87 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSK--NTLYLQMNS 87 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTT--TEEEEEECS
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCC--CEEEEEECc
Confidence 447889999999999999987 68899998431 1 1 10 1123333221111 134899999
Q ss_pred cCCCCCeEEEEEEeeCCCC--ceeEEEEEEEecC-------------CCeeEE----EEccccccEeEEEEEeeccCCCc
Q psy15734 243 ILSHQFGSYRCVAVNALGE--TDGFIKVYVNLVD-------------GDIFQI----RKMSRLHMGAYLCIASNGVVPSV 303 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~~-------------~~~~~~----~~~~~~~~g~~~C~a~~~~~~~~ 303 (314)
++.+|+|.|+|.|.|..+. ......|.|...+ ...+.. ..+..++...+.|.+.+.+++.+
T Consensus 88 v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v 167 (247)
T 2ghw_B 88 LRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNL 167 (247)
T ss_dssp CCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCE
T ss_pred CCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceE
Confidence 9999999999999997322 2233466666431 122222 12445666789999999998999
Q ss_pred cceE
Q psy15734 304 SHRI 307 (314)
Q Consensus 304 ~w~v 307 (314)
.|.-
T Consensus 168 ~W~k 171 (247)
T 2ghw_B 168 AWYQ 171 (247)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 432
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.42 E-value=1.8e-12 Score=100.02 Aligned_cols=125 Identities=12% Similarity=0.043 Sum_probs=82.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCV 254 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~ 254 (314)
+|.|...+. ..+.+|++++|.|.+.+ |.+.+.|+|++............ ... .....|.|.+++.+|+|.|+|.
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~---~~~-~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEH---HDG-VSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEE---ETT-EEEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeec---CCC-CceEEEEeccCCcccCeEEEEe
Confidence 455555454 56889999999999974 77899999975433211100000 000 1224899999999999999999
Q ss_pred EeeCC-----CCceeEEEEEEEecC-CCeeEEE---EccccccEeEEEEEeeccCCCccce
Q psy15734 255 AVNAL-----GETDGFIKVYVNLVD-GDIFQIR---KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 255 a~n~~-----g~~~~~~~l~V~~~~-~~~~~~~---~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|.. +..+..+.|.|.... .+.+... .+..++...+.|.+.+. ++.+.|.
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~~~~-~~~~~w~ 141 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSS-YDMYHLS 141 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEESSC-CSEEEEE
T ss_pred EecCCCCccccCCCCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeCCCC-CceEEEE
Confidence 98753 233556778887643 3444432 34455666799999864 5677773
No 433
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.7e-12 Score=89.34 Aligned_cols=97 Identities=22% Similarity=0.294 Sum_probs=70.2
Q ss_pred CCCCceecCCcc---eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeec
Q psy15734 19 PDMPRFAEPVAN---VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 19 ~~~p~~~~~~~~---~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 95 (314)
..+|.++..+.. +.+.+|+++.|.|.+. .+.+.+.|++++ ..+ ..+.++.+...+. ...|.|.+++
T Consensus 8 ~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g-~~~--------~~~~~~~~~~~~~-~~~L~I~~v~ 76 (113)
T 2cpc_A 8 TDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDG-EEV--------VESPALLLQKEDT-VRRLVLPAVQ 76 (113)
T ss_dssp CSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETT-EEC--------CCBTTBEEEECSS-EEEEEESSCC
T ss_pred ccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECC-EEC--------ccCCCEEEEECCC-EEEEEECCCC
Confidence 345555554444 7889999999999995 677899999954 332 2234555544432 2379999999
Q ss_pred CCCCeEEEEEEecCCCcceeEEEEEEeCCceeee
Q psy15734 96 ETDRGWYMCQINTVPMTSQKGYLQVVVPPRILLD 129 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~~~~~~l~v~~~p~~~~~ 129 (314)
.+|+|.|+|.+.| ....+.|.|..+|.....
T Consensus 77 ~~D~G~Y~C~a~n---~~~~~~l~V~~~p~~~~~ 107 (113)
T 2cpc_A 77 LEDSGEYLCEIDD---ESASFTVTVTEPPVRIIY 107 (113)
T ss_dssp TTTCEEEEEESSS---CEEEEEEEEECCCCCCCC
T ss_pred cccCEEEEEEEec---CcEEEEEEEecCCchhcc
Confidence 9999999999976 566778889888865543
No 434
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.41 E-value=1.5e-12 Score=101.15 Aligned_cols=122 Identities=15% Similarity=0.099 Sum_probs=78.6
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCC-Ceee---e-------------cCCceeeeEeeCCeeeEEEEEEee
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDMI---I-------------TGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~~---~-------------~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+....+.+|+++.|.|.+.+.| .+.+.|++++ +... . ...++.+.....+ ...+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~L~I~~ 84 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSK--NQYYLDLNS 84 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGG--TEEEEEECS
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCC--CEEEEEECC
Confidence 4556889999999999999876 4899999853 1111 1 1123333221111 134899999
Q ss_pred cCCCCCeEEEEEEeeCCCCceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 243 ILSHQFGSYRCVAVNALGETDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
++.+|+|.|.|.|.|.. .......|.|...+ .+.+.+.. +..++...+.|.+.+. |.| .+.|.
T Consensus 85 v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 155 (210)
T 3d9a_H 85 VTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 155 (210)
T ss_dssp CCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEe
Confidence 99999999999999864 22233566665321 23333222 2234455799999997 767 88895
No 435
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.41 E-value=2e-12 Score=105.02 Aligned_cols=128 Identities=18% Similarity=0.145 Sum_probs=84.6
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC----eeeec---------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG----DMIIT---------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~----~~~~~---------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+.+..++....+.+|+++.|.|.+.+.|.+.+.|++++. ..+.. ..++.... .+ ...+|.|.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~ 88 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG-SG---TDFTLTISS 88 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEESS
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec-cC---CeEEEEEcc
Confidence 345556677789999999999999999999999998542 11211 12332221 11 134899999
Q ss_pred cCCCCCeEEEEEEeeCCCC-ceeEEEEEEEecCC-----------CeeEE-----EEccccccEeEEEEEeecc--CCCc
Q psy15734 243 ILSHQFGSYRCVAVNALGE-TDGFIKVYVNLVDG-----------DIFQI-----RKMSRLHMGAYLCIASNGV--VPSV 303 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~-----------~~~~~-----~~~~~~~~g~~~C~a~~~~--~~~~ 303 (314)
++.+|+|.|.|.|.|..+. ......|.|...+. +.+.+ ..+..++...+.|.+.+.+ .+.+
T Consensus 89 v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v 168 (276)
T 3auv_A 89 LQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWI 168 (276)
T ss_dssp CCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEE
T ss_pred CChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEE
Confidence 9999999999999997654 23345666665431 12222 1344555667999999876 4789
Q ss_pred cceE
Q psy15734 304 SHRI 307 (314)
Q Consensus 304 ~w~v 307 (314)
.|.-
T Consensus 169 ~W~k 172 (276)
T 3auv_A 169 HWVR 172 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 436
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.41 E-value=4.2e-12 Score=117.18 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=35.2
Q ss_pred EEEEEeecCCCCCeEEEEEEeeCCCC-ceeEEEEEEEecCC
Q psy15734 236 MTLKIRSILSHQFGSYRCVAVNALGE-TDGFIKVYVNLVDG 275 (314)
Q Consensus 236 s~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~ 275 (314)
++|.|.++...|+|.|+|.|.|..|. .+..+.|.|..+|.
T Consensus 223 ~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~ 263 (731)
T 2v5y_A 223 ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPV 263 (731)
T ss_dssp EEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCC
T ss_pred EEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCC
Confidence 49999999999999999999999997 67778888877654
No 437
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.41 E-value=5.2e-13 Score=104.11 Aligned_cols=117 Identities=13% Similarity=-0.017 Sum_probs=76.1
Q ss_pred CCcceeecC--ccEEEEEEEeecCCceeEEecC--CCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEee
Q psy15734 182 NQLEGAFVS--QTVELHCHTEAFPASLNYWTNE--KGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVN 257 (314)
Q Consensus 182 ~~~~~v~~g--~~~~l~C~~~g~p~p~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n 257 (314)
+....+.+| +++.|.|.+.+ |.+.+.|++. ++..+.... .......+ .|.|.+++.+|+|.|+|.|.|
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~--~~~~~~~~-----~l~I~~v~~~D~G~Y~C~a~n 85 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGN--RISWDSKK-----GFTIPSYMISYAGMVFCEAKI 85 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSS--SCEEETTT-----EEEEEGGGTTTCSEEEEEEC-
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCC--cccccCCc-----cEEEccCChhcCceEEEEEEE
Confidence 356678899 99999999987 7799999874 454443332 22223344 799999999999999999999
Q ss_pred CCCCcee-EEEEEEEecCCCeeEEE-----EccccccEeEEEEEeeccC--CCccce
Q psy15734 258 ALGETDG-FIKVYVNLVDGDIFQIR-----KMSRLHMGAYLCIASNGVV--PSVSHR 306 (314)
Q Consensus 258 ~~g~~~~-~~~l~V~~~~~~~~~~~-----~~~~~~~g~~~C~a~~~~~--~~~~w~ 306 (314)
..+.... .+.|.|.....+.+.+. .+..++...+.|.+.+.+. +.+.|.
T Consensus 86 ~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~ 142 (213)
T 2x1w_L 86 NDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 142 (213)
T ss_dssp ---CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEE
T ss_pred CCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEE
Confidence 5443322 26666643222223322 2344556679999998653 468884
No 438
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.41 E-value=2.5e-12 Score=102.58 Aligned_cols=127 Identities=18% Similarity=0.205 Sum_probs=83.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecC-----CceeEEecCCC-e---eeec---------CCceeeeEeeCCeeeEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFP-----ASLNYWTNEKG-D---MIIT---------GDDYEDSRLINGYSCHMTL 238 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~~~W~~~~~-~---~~~~---------~~~~~~~~~~~~~~~~s~L 238 (314)
.+..++....+.+|++++|.|.+.+.| .+.+.|++.+. . .+.. ..++.... .. ...+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L 78 (247)
T 1svz_A 3 LMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG-SG---TDFTL 78 (247)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ET---TEEEE
T ss_pred cEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc-CC---CEEEE
Confidence 455667778899999999999999988 68999998532 1 1111 12333221 11 13489
Q ss_pred EEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecCC----------CeeEE-----EEccccccEeEEEEEeecc--C
Q psy15734 239 KIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLVDG----------DIFQI-----RKMSRLHMGAYLCIASNGV--V 300 (314)
Q Consensus 239 ~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~----------~~~~~-----~~~~~~~~g~~~C~a~~~~--~ 300 (314)
.|.+++.+|+|.|.|.|.|..+.. .....|.|...+. +.+.+ ..+..++...+.|.+.+.+ .
T Consensus 79 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~ 158 (247)
T 1svz_A 79 KISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTD 158 (247)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGG
T ss_pred EECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCC
Confidence 999999999999999999976532 2345666655431 11121 1245556667999999875 4
Q ss_pred CCccceE
Q psy15734 301 PSVSHRI 307 (314)
Q Consensus 301 ~~~~w~v 307 (314)
+.+.|.-
T Consensus 159 ~~v~W~k 165 (247)
T 1svz_A 159 YSMHWVK 165 (247)
T ss_dssp SCEEEEE
T ss_pred cEEEEEE
Confidence 6899965
No 439
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.40 E-value=8.5e-13 Score=104.26 Aligned_cols=127 Identities=14% Similarity=0.101 Sum_probs=80.6
Q ss_pred cCCCcceeecCccEEEEEEEeec-CC-c-eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEe
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAF-PA-S-LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAV 256 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~-p~-p-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~ 256 (314)
..+....+.+|+++.|.|.+.|. |. | .+.|++++...............++.|...+.|.|.++..+|+|.|+|.|.
T Consensus 18 ~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~ 97 (231)
T 2w59_A 18 IPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQ 97 (231)
T ss_dssp ECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred eCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEE
Confidence 45566678899999999999995 64 5 999998754431111111111122335667789999999999999999999
Q ss_pred eCCCCceeEEEEEEE--ecCCCeeEEEEccc----cccEeEEEEEeeccC--CCccce
Q psy15734 257 NALGETDGFIKVYVN--LVDGDIFQIRKMSR----LHMGAYLCIASNGVV--PSVSHR 306 (314)
Q Consensus 257 n~~g~~~~~~~l~V~--~~~~~~~~~~~~~~----~~~g~~~C~a~~~~~--~~~~w~ 306 (314)
|..+.......+.+. ....+.+.+..... .....+.|.|.++++ +.+.|.
T Consensus 98 ~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 155 (231)
T 2w59_A 98 HEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRPRDIEIRWL 155 (231)
T ss_dssp CTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred cCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccCCCcEEEEE
Confidence 987654333333221 11223343322111 123569999999755 478885
No 440
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=1.1e-12 Score=102.11 Aligned_cols=125 Identities=17% Similarity=0.269 Sum_probs=80.4
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCC-Ceee---ec---------CCceeeeEeeCCeeeEEEEEEeecC
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK-GDMI---IT---------GDDYEDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~-~~~~---~~---------~~~~~~~~~~~~~~~~s~L~i~~~~ 244 (314)
+.. +....+.+|+++.|.|.+.+.|.+.+.|++++ +..+ .. ..++.+.. .. ....|.|.+++
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v~ 77 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST-SG---TTATLTISGAQ 77 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE-ET---TEEEEEETTCC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe-eC---CEEEEEECcCC
Confidence 344 66778999999999999999998999999853 2211 10 12333222 11 13489999999
Q ss_pred CCCCeEEEEEEeeCCCCc---eeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeecc-C-CCccceE
Q psy15734 245 SHQFGSYRCVAVNALGET---DGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNGV-V-PSVSHRI 307 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~---~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~~-~-~~~~w~v 307 (314)
.+|+|.|+|.|.|..+.. .....|.|...+ .+.+.+.. ...++...+.|.+.+.+ + +.++|..
T Consensus 78 ~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 151 (212)
T 1nfd_E 78 PEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKA 151 (212)
T ss_dssp GGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEE
T ss_pred cccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEE
Confidence 999999999999732211 233456665432 23333211 12234456999999874 3 6899953
No 441
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=90.50 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=62.2
Q ss_pred ceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCcee
Q psy15734 185 EGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETDG 264 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 264 (314)
..+.+|+++.|.|.+. .|.+.+.|+++ +..+....++.+... +. ...|.|.++..+|+|.|+|.|.| ...
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~-g~~~~~~~~~~~~~~-~~---~~~L~I~~v~~~D~G~Y~C~a~n----~~~ 92 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKD-GEEVVESPALLLQKE-DT---VRRLVLPAVQLEDSGEYLCEIDD----ESA 92 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEET-TEECCCBTTBEEEEC-SS---EEEEEESSCCTTTCEEEEEESSS----CEE
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEEC-CEECccCCCEEEEEC-CC---EEEEEECCCCcccCEEEEEEEec----CcE
Confidence 4678999999999995 88999999996 444444445444322 11 23899999999999999999988 567
Q ss_pred EEEEEEEecCC
Q psy15734 265 FIKVYVNLVDG 275 (314)
Q Consensus 265 ~~~l~V~~~~~ 275 (314)
.+.|.|..+|.
T Consensus 93 ~~~l~V~~~p~ 103 (113)
T 2cpc_A 93 SFTVTVTEPPV 103 (113)
T ss_dssp EEEEEEECCCC
T ss_pred EEEEEEecCCc
Confidence 88888887663
No 442
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.40 E-value=7.1e-13 Score=102.87 Aligned_cols=127 Identities=12% Similarity=0.063 Sum_probs=74.4
Q ss_pred EcCCCcce-eecCccEEEEEEEeecCC----ceeEEecCCCeeeecCCceeeeEeeCC-eeeEEEEEEeecCCCCCeEEE
Q psy15734 179 TIPNQLEG-AFVSQTVELHCHTEAFPA----SLNYWTNEKGDMIITGDDYEDSRLING-YSCHMTLKIRSILSHQFGSYR 252 (314)
Q Consensus 179 ~~~~~~~~-v~~g~~~~l~C~~~g~p~----p~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~s~L~i~~~~~~d~G~Y~ 252 (314)
..++.... +.+|+++.|.|.+.|.|+ +.+.|++++.... ...........++ +...+.|.|.....+|+|.|+
T Consensus 6 ~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~-~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~ 84 (207)
T 1l6x_A 6 LFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH-NAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYK 84 (207)
T ss_dssp EECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEEC-CCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEE
T ss_pred EeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCcccc-CcccCCceeccCCcEEEEEEEEEEHHHccCCceEE
Confidence 33444434 379999999999999763 4999999754332 2111111112222 444445666555566699999
Q ss_pred EEEeeCCCCceeEEEEEE--EecCCCeeEEEEcc----ccccEeEEEEEeeccCC--Cccce
Q psy15734 253 CVAVNALGETDGFIKVYV--NLVDGDIFQIRKMS----RLHMGAYLCIASNGVVP--SVSHR 306 (314)
Q Consensus 253 C~a~n~~g~~~~~~~l~V--~~~~~~~~~~~~~~----~~~~g~~~C~a~~~~~~--~~~w~ 306 (314)
|.|.|..+.......+.+ .....+.+.+.... ......+.|.|.+++++ .++|.
T Consensus 85 C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 1l6x_A 85 CKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWE 146 (207)
T ss_dssp EEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEE
Confidence 999999876533333321 12222334333221 12235799999997544 78895
No 443
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.40 E-value=2.8e-12 Score=102.07 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=83.8
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC----eeeec---------CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG----DMIIT---------GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~----~~~~~---------~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
.+...+....+.+|++++|.|.+.+.|.+.+.|++++. ..+.. ..++.+.. .. ...+|.|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v 78 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG-SG---TDFTLSINSV 78 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ET---TEEEEEESSC
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec-CC---CEEEEEECCC
Confidence 45667777889999999999999999999999998531 11111 12333221 11 1348999999
Q ss_pred CCCCCeEEEEEEeeCCCCc-eeEEEEEEEecCC-----------C-eeEEE---EccccccEeEEEEEeecc--CCCccc
Q psy15734 244 LSHQFGSYRCVAVNALGET-DGFIKVYVNLVDG-----------D-IFQIR---KMSRLHMGAYLCIASNGV--VPSVSH 305 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~-----------~-~~~~~---~~~~~~~g~~~C~a~~~~--~~~~~w 305 (314)
+.+|+|.|.|.|.|..+.. .....|.|...+. + .+... .+..++...+.|.+.+.+ .+.+.|
T Consensus 79 ~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W 158 (242)
T 2znx_A 79 ETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSX 158 (242)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEE
T ss_pred ChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceee
Confidence 9999999999999976432 2345666765432 1 12111 234455567999999875 478889
Q ss_pred eE
Q psy15734 306 RI 307 (314)
Q Consensus 306 ~v 307 (314)
.-
T Consensus 159 ~k 160 (242)
T 2znx_A 159 IR 160 (242)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 444
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=3.2e-12 Score=87.95 Aligned_cols=91 Identities=9% Similarity=0.125 Sum_probs=68.6
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC----------ceeeeEeeCCeeeEEEEEEeecC
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD----------DYEDSRLINGYSCHMTLKIRSIL 244 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~----------~~~~~~~~~~~~~~s~L~i~~~~ 244 (314)
+|.|..++.+..+.+|+++.|.|.+.+ .|.+.|+++ +..+..+. ++.+. .++ ..++|.|.++.
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~kn-G~~l~~~~~~~~~~~~~~r~~i~--~~g--~~~~L~I~~v~ 80 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLN-GEELKSNEPEGQVEPGALRYRIE--QKG--LQHRLILHAVK 80 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEES-SCBCCSSCCCTTSCTTSCEEEEC--CBT--TEEEEEEESCC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEEC-CEECccCcccccccccccEEEEE--eCC--cEEEEEECCCC
Confidence 456777888899999999999999998 788999997 44454444 44443 222 13489999999
Q ss_pred CCCCeEEEEEEeeCCCCceeEEEEEEEecCC
Q psy15734 245 SHQFGSYRCVAVNALGETDGFIKVYVNLVDG 275 (314)
Q Consensus 245 ~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 275 (314)
.+|+|.|+|...+ ....+..|.|...|.
T Consensus 81 ~~D~G~Y~~~~~~---~~~ssA~L~V~~~p~ 108 (112)
T 2e6q_A 81 HQDSGALVGFSCP---GVQDSAALTIQESSG 108 (112)
T ss_dssp STTCSEEEEEEET---TEEEEEEEEEECSSC
T ss_pred HHHCccEEEEEEC---CeeEEEEEEEeCCCc
Confidence 9999999875543 346788898987753
No 445
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.40 E-value=2.6e-12 Score=100.77 Aligned_cols=123 Identities=14% Similarity=0.106 Sum_probs=79.6
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCC-Cee---eec----------------CCceeeeEeeCCeeeEEEEE
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDM---IIT----------------GDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~---~~~----------------~~~~~~~~~~~~~~~~s~L~ 239 (314)
+....+.+|+++.|.|.+.+.| .+.+.|++.+ +.. +.. ..++.+..... ....+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 84 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNS--QSILYLQ 84 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETT--TTEEEEE
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECC--CCeEEEE
Confidence 3456789999999999999876 7899999853 211 100 12222222111 1134899
Q ss_pred EeecCCCCCeEEEEEEeeCCC-----CceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 240 IRSILSHQFGSYRCVAVNALG-----ETDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
|.+++.+|+|.|.|.+.|..+ .......|.|...+ .+.+.+.. +..++...+.|.|.+. |.| .+.|.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 164 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 164 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEe
Confidence 999999999999999999764 22234566666422 23333322 2234455799999986 777 88885
No 446
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=5.3e-12 Score=86.24 Aligned_cols=93 Identities=16% Similarity=0.260 Sum_probs=70.3
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+ +.+.+.+.|++++.. +..+.++.+..++ ....|.|.+++.+|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~---------l~~~~~~~~~~~~-~~~~L~I~~v~~~D 74 (103)
T 2dku_A 6 SGANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLE---------LRASGKHQPSQEG-LTLRLTISALEKAD 74 (103)
T ss_dssp CCCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCB---------CCSSSSEEEEEET-TEEEEEEESCCTTT
T ss_pred CCCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEE---------CCCCCeEEEEeCC-CEEEEEECCCCccc
Confidence 357888888999999999999999995 667789999995532 2234466555333 22379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+ +.....+.|.|..+|.
T Consensus 75 ~G~Y~C~~---g~~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 75 SDTYTCDI---GQAQSRAQLLVQGRRS 98 (103)
T ss_dssp CSEEEEEC---SSCBCCEEEEEECSCC
T ss_pred CEEEEEEe---CCceEEEEEEEeCccC
Confidence 99999983 4455567888877654
No 447
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.39 E-value=2.6e-13 Score=103.26 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=78.0
Q ss_pred cceeecCccEEEEEEEeecCCceeEEecCCCeeeecC-------------CceeeeE--eeCCeeeEEEEEEeecCCCCC
Q psy15734 184 LEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITG-------------DDYEDSR--LINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~s~L~i~~~~~~d~ 248 (314)
.+.+.+|+++.|.|.+.+.|.+.+.|++++....... .++.... ..++ ..+|.|.+++.+|+
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~---~~~L~i~~v~~~D~ 80 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG---NFPLIIKNLKIEDS 80 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGT---BCCEEECSCCGGGC
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCC---eEEEEEecCCHHHC
Confidence 3468899999999999999999999999865433221 1111110 0111 23699999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCccce
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
|.|+|.+.|..+ .+.|.|...+.+.- ..+..++...+.|.+.+.|.|.+.|.
T Consensus 81 G~Y~C~~~~~~~----~~~l~V~~~~~~~~--~~v~~g~~~~l~C~~~~~p~~~v~W~ 132 (184)
T 2ny1_B 81 DTYICEVEDQKE----EVQLLVFGLTANSD--THLLQGQSLTLTLESPPGSSPSVQCR 132 (184)
T ss_dssp EEEEEEETTEEE----EEEEEEEEEEESSC--SEEETTCCEEEEEECCTTCCCEEEEE
T ss_pred EEEEEEEEcCCC----cEEEEEEEecCCCC--ceeecCCCEEEEEEcCCCCCCEEEEE
Confidence 999999998754 44555543211100 13345566679999999999999995
No 448
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.38 E-value=5.7e-12 Score=99.05 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=79.0
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCC-Cee---eec--------------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDM---IIT--------------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~---~~~--------------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
....+.+|++++|.|.+.+.| .+.+.|++.+ +.. +.. ..++.+..... ....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I~~ 85 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDL--EDFVYLQMHK 85 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETT--TTEEEEEECS
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCC--CCEEEEEECC
Confidence 346789999999999999877 7899999853 211 110 12232222111 1135899999
Q ss_pred cCCCCCeEEEEEEeeCCC-----C---ceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 243 ILSHQFGSYRCVAVNALG-----E---TDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g-----~---~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
++.+|+|.|.|.+.|..| . ....+.|.|...+ .+.+.+.. +..++...+.|.+.++ |.| .++|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 165 (225)
T 1op3_H 86 MRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 165 (225)
T ss_dssp CCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECC
T ss_pred CChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEe
Confidence 999999999999999865 1 1234577777532 23333321 2233445699999987 555 88884
No 449
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.38 E-value=3.8e-12 Score=96.66 Aligned_cols=108 Identities=13% Similarity=0.162 Sum_probs=76.9
Q ss_pred ceeecCccEEEEEEEeecCCc--eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCc
Q psy15734 185 EGAFVSQTVELHCHTEAFPAS--LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGET 262 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g~p~p--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~ 262 (314)
..+.+|+++.|.|.+.+.|.| .+.|+++ +..+........ ...|.|. +.+|+|.|+|.|.| ..
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~-~~~l~~~~~~~~---------~~~l~i~--~~~d~G~Y~C~~~n---~~ 72 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKEDALPGQ---------KTEFKVD--SDDQWGEYSCVFLP---EP 72 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESS-SEEEECTTCCCS---------EEEEEEC--GGGCCEEEEEEEES---TT
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeC-CEEeecccccCC---------cEEEEEe--chhhCeEEEEEEEC---Cc
Confidence 457899999999999998887 8999996 444433322211 2366666 68999999999998 33
Q ss_pred eeEEEEEEEecCCCeeEE--EEccccccEeEEEEEeecc-CCCccceE
Q psy15734 263 DGFIKVYVNLVDGDIFQI--RKMSRLHMGAYLCIASNGV-VPSVSHRI 307 (314)
Q Consensus 263 ~~~~~l~V~~~~~~~~~~--~~~~~~~~g~~~C~a~~~~-~~~~~w~v 307 (314)
...+.|.|..+|.-.... ..+..++...+.|.+.+.| .|.+.|..
T Consensus 73 ~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 73 MGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp SCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred CcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 467777787654322111 2345556677999999999 78999976
No 450
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.38 E-value=5.5e-12 Score=102.75 Aligned_cols=123 Identities=17% Similarity=0.133 Sum_probs=81.5
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC-e-e--eec--------------CCceeeeEeeCCeeeEEEEEEe
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-D-M--IIT--------------GDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~-~--~~~--------------~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+....+.+|++++|.|.+.+.| .+.+.|++.+. . . +.. ..++.+.....+ ...+|.|.
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~sL~I~ 110 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSS--NTAYLQLS 110 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTT--TEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCC--CeEEEEEC
Confidence 4456789999999999999875 68999998542 1 1 110 123322221111 13489999
Q ss_pred ecCCCCCeEEEEEEeeCCCCc-----eeEEEEEEEecC-------------CCeeEEE----EccccccEeEEEEEeecc
Q psy15734 242 SILSHQFGSYRCVAVNALGET-----DGFIKVYVNLVD-------------GDIFQIR----KMSRLHMGAYLCIASNGV 299 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~-------------~~~~~~~----~~~~~~~g~~~C~a~~~~ 299 (314)
+++.+|+|.|.|.+.|..|.. ...+.|.|...+ ...+... .+..++...+.|.+.+.+
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 190 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV 190 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC
Confidence 999999999999999987621 133467776653 1222221 345566678999999998
Q ss_pred CCCccceE
Q psy15734 300 VPSVSHRI 307 (314)
Q Consensus 300 ~~~~~w~v 307 (314)
+.+.|.-
T Consensus 191 -~~v~W~k 197 (282)
T 1qok_A 191 -SYMHWFQ 197 (282)
T ss_dssp -SCCEEEE
T ss_pred -ceEEEEE
Confidence 8999965
No 451
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.38 E-value=2.2e-12 Score=97.71 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=79.1
Q ss_pred CcceeecCccEEEEEEEee-cCCceeEEecCCCeeeec----------CCce--eeeE-eeCCeeeEEEEEEeecCCCCC
Q psy15734 183 QLEGAFVSQTVELHCHTEA-FPASLNYWTNEKGDMIIT----------GDDY--EDSR-LINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g-~p~p~~~W~~~~~~~~~~----------~~~~--~~~~-~~~~~~~~s~L~i~~~~~~d~ 248 (314)
..+.+.+|++++|.|.+.+ .+.+.+.|++.+...+.. ...| +... ..++ +|.|.+++.+|+
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~-----sL~I~~v~~~D~ 81 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG-----ALRIYNVSKEDR 81 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTC-----CEEECSCCGGGC
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCc-----cEEEcCCCHHHC
Confidence 4567899999999999865 447899999952222110 0111 1111 2233 899999999999
Q ss_pred eEEEEEEeeCCCCceeEEEEEEEecCCCeeEEEEccccccEeEEEEEeeccCCCccceE
Q psy15734 249 GSYRCVAVNALGETDGFIKVYVNLVDGDIFQIRKMSRLHMGAYLCIASNGVVPSVSHRI 307 (314)
Q Consensus 249 G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a~~~~~~~~~w~v 307 (314)
|.|+|.+.+.. .....+.|.|..++..+..... .....++|.+.+.|.|.+.|..
T Consensus 82 G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~~---~~~v~L~C~~~~gp~p~i~W~~ 136 (180)
T 2dru_A 82 GDYYMRMLHET-EDQWKITMEVYEMVSKPMIYWE---CSNATLTCEVLEGTDVELKLYQ 136 (180)
T ss_dssp EEEEEEEESSS-EEEEEEEEEEECCCCCCEEEEE---GGGTEEEEECSSCTTCEEEEEE
T ss_pred eEEEEEEEcCC-eEEEEEEEEEECCCCCCEEEec---CCCEEEEEEeCCCCCCEEEEEE
Confidence 99999998876 5677788888776443332222 2346799999444888999953
No 452
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.38 E-value=3.7e-12 Score=87.82 Aligned_cols=92 Identities=22% Similarity=0.356 Sum_probs=70.1
Q ss_pred CCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCC
Q psy15734 19 PDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETD 98 (314)
Q Consensus 19 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 98 (314)
..+|.|...+..+.+.+|+++.|.|.+.+. +.+.|++++.. +..+.++.+..++. ...|.|.+++.+|
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~---------~~~~~~~~~~~~~~-~~~L~I~~v~~~D 73 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPET---------LRDGGRYSLKQDGT-RCELQIHDLSVAD 73 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSB---------CCSSSSCEEEEETT-EEEEEESSCCTTT
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEE---------CCCCCCEEEEecCC-EEEEEECCCCccc
Confidence 467888888899999999999999999765 68999995532 22345665554432 3379999999999
Q ss_pred CeEEEEEEecCCCcceeEEEEEEeCCc
Q psy15734 99 RGWYMCQINTVPMTSQKGYLQVVVPPR 125 (314)
Q Consensus 99 ~G~Y~C~~~~~~~~~~~~~l~v~~~p~ 125 (314)
+|.|+|.+.+ ......|.|..+|.
T Consensus 74 ~G~Y~C~a~n---~~~~~~l~V~~~p~ 97 (108)
T 2dm7_A 74 AGEYSCMCGQ---ERTSATLTVRALPA 97 (108)
T ss_dssp CSEEEEEETT---EEEEEECEEECCCS
T ss_pred CEEEEEEEcC---CEEEEEEEEecCCH
Confidence 9999999943 45667788877554
No 453
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.37 E-value=1.6e-11 Score=97.80 Aligned_cols=127 Identities=15% Similarity=0.131 Sum_probs=82.0
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC--e--eeec-----------CCceeeeEeeCCeeeEEEEEEe
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG--D--MIIT-----------GDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~--~--~~~~-----------~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
.+..++....+.+|+++.|.|.+.+.|.+.+.|++.+. . .+.. ..++.+.... ....+|.|.
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~sL~I~ 79 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQ---DRQFILSSK 79 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEE---TTEEEEEES
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecC---CCEEEEEEC
Confidence 35566777889999999999999999999999998321 1 0000 1222222211 123589999
Q ss_pred ecCCCCCeEEEEEEeeCCC------CceeEEEEEEEec----CCCeeEEEEcc-----ccccEeEEEEEeeccCC--Ccc
Q psy15734 242 SILSHQFGSYRCVAVNALG------ETDGFIKVYVNLV----DGDIFQIRKMS-----RLHMGAYLCIASNGVVP--SVS 304 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~~----~~~~~~~~~~~-----~~~~g~~~C~a~~~~~~--~~~ 304 (314)
+++.+|+|.|.|.+.|..| .......|.|... ..+.+.+.... .++...+.|.+.+++++ .+.
T Consensus 80 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 80 KLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELS 159 (245)
T ss_dssp SCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEE
Confidence 9999999999999999433 1223456677641 12333332221 14456799999996544 567
Q ss_pred ce
Q psy15734 305 HR 306 (314)
Q Consensus 305 w~ 306 (314)
|.
T Consensus 160 W~ 161 (245)
T 3nfj_J 160 WW 161 (245)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 454
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.37 E-value=9e-13 Score=104.17 Aligned_cols=128 Identities=18% Similarity=0.260 Sum_probs=70.5
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC-ee---eec---------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG-DM---IIT---------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~-~~---~~~---------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+.+..++....+.+|+++.|.|.+.+.|.+.+.|++++. .. +.. ..++.... .....+|.|.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~L~I~~ 99 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG----YGTDFVFTIEN 99 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE----EEEEEEEC---
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec----cCCEEEEEECC
Confidence 344555667789999999999999999989999998532 11 110 11222211 12345899999
Q ss_pred cCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEEc----cccccEeEEEEEeeccCC--CccceE
Q psy15734 243 ILSHQFGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHRI 307 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~v 307 (314)
++.+|+|.|.|.|.|..+.. .....|.|.... .+.+.+... ..++...+.|.+.+.+++ .++|..
T Consensus 100 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 172 (233)
T 3bqu_C 100 MLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 172 (233)
T ss_dssp --CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEE
Confidence 99999999999999976533 223456665533 344443221 124456799999996654 688853
No 455
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.37 E-value=1.3e-12 Score=110.35 Aligned_cols=108 Identities=23% Similarity=0.257 Sum_probs=63.8
Q ss_pred CCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCeEEEEEE
Q psy15734 27 PVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRGWYMCQI 106 (314)
Q Consensus 27 ~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 106 (314)
++..+.+.+|+++.|.|.+.+ |.+.+.|+++++..+.. ...+.++.+ .+ ++|.|.+++.+|+|.|+|.+
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~-----~~~~~r~~~-~~----~~L~I~~v~~~D~G~Y~C~a 320 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLS-----QGSNGSVSV-RN----GDLFFKKVQVEDGGVYTCYA 320 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCS-----CCSSSSEEE-ET----TEEEESSCCTTSCEEEEEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEee-----cccCCceEe-ec----CeEEEeecCcccCEEEEEEE
Confidence 456789999999999999998 88899999966543211 122335665 32 27999999999999999999
Q ss_pred ecC-CCcceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceE
Q psy15734 107 NTV-PMTSQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVA 158 (314)
Q Consensus 107 ~~~-~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~ 158 (314)
.|. +..+..+.|.|...+ ..|+.+.|.|.+.|.|.|.+.
T Consensus 321 ~N~~g~~~~~~~l~V~~~~-------------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 321 MGETFNETLSVELKVYNFT-------------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp ECSSCEEEEEEEEEEESSC-------------CC-------------------
T ss_pred ecCCCccEEEEEEEEEeee-------------ccCCceEEEEEeCCCCCCccc
Confidence 876 344455566664321 467899999999999998763
No 456
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.37 E-value=7e-12 Score=101.93 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=84.0
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC-e--e-ee---c-----------CCceeeeEeeCCeeeEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG-D--M-II---T-----------GDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~-~--~-~~---~-----------~~~~~~~~~~~~~~~~s~ 237 (314)
+.+..++....+.+|+++.|.|.+.+.|.+.+.|++.+. . . +. . ..++.+... . ....+
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~--~~~~s 101 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA-S--LTLST 101 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEEC-S--SSEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeC-C--CCEEE
Confidence 445566777889999999999999988999999998641 1 1 10 0 112222211 1 12358
Q ss_pred EEEeecCCCCCeEEEEEEeeCCCC------ceeEEEEEEEec----CCCeeEEEEcc-----ccccEeEEEEEeeccC--
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALGE------TDGFIKVYVNLV----DGDIFQIRKMS-----RLHMGAYLCIASNGVV-- 300 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g~------~~~~~~l~V~~~----~~~~~~~~~~~-----~~~~g~~~C~a~~~~~-- 300 (314)
|.|.+++.+|+|.|+|.+.|..+. ....+.|.|... ..+.+.+.... .++...+.|.+.++++
T Consensus 102 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 181 (279)
T 2wbj_D 102 LTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 181 (279)
T ss_dssp EEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSC
T ss_pred EEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCC
Confidence 999999999999999999995321 123356777652 13444443221 2345679999999755
Q ss_pred CCccce
Q psy15734 301 PSVSHR 306 (314)
Q Consensus 301 ~~~~w~ 306 (314)
+.+.|.
T Consensus 182 ~~v~W~ 187 (279)
T 2wbj_D 182 VELSWW 187 (279)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 588885
No 457
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=6e-12 Score=86.03 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=64.5
Q ss_pred CCCCCceecCCcc-eEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecC-cCEEEEeCCceeEEEEEeeec
Q psy15734 18 KPDMPRFAEPVAN-VTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQN-KRVSITFNDHRSWFLHLRDVQ 95 (314)
Q Consensus 18 ~~~~p~~~~~~~~-~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~ 95 (314)
...+|.|+..+.. +.+.+|+++.|.|.+ +.+.+.+.|++++. .+. .+ .++.+..++. ...|.|.+++
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~-~l~--------~~~~~~~~~~~~~-~~~L~I~~v~ 80 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQ-EIQ--------MSGSKYIFESIGA-KRTLTISQCS 80 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSS-EEC--------CCSSSSEEEEETT-EEEEEECSCS
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCE-ECC--------CCCCeEEEEecCC-EEEEEECCCC
Confidence 3467888887666 889999999999999 66778899999553 321 22 4555554333 3379999999
Q ss_pred CCCCeEEEEEEecCCCcceeEEEEEE
Q psy15734 96 ETDRGWYMCQINTVPMTSQKGYLQVV 121 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~~~~~~~~~l~v~ 121 (314)
.+|+|.|+|.+.+ ......|.|.
T Consensus 81 ~~D~G~Y~C~a~~---~~~~~~l~V~ 103 (104)
T 1pd6_A 81 LADDAAYQCVVGG---EKCSTELFVK 103 (104)
T ss_dssp SSSCEEEEEEETT---EEECCEEEEE
T ss_pred cccCEEEEEEECC---CcEEEEEEEe
Confidence 9999999999932 3333445543
No 458
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.36 E-value=4e-12 Score=103.15 Aligned_cols=165 Identities=13% Similarity=0.134 Sum_probs=79.1
Q ss_pred ceeEEecCceEEEEEEecccCCC-ceEEEcCCC-cee-ecC--------------CeeC---------------------
Q psy15734 133 TDVVVREGTEVTLECSAVGYPEP-YVAWRREDG-KAI-NYN--------------GELV--------------------- 174 (314)
Q Consensus 133 ~~~~~~~g~~~~l~C~~~~~p~p-~~~W~~~~~-~~~-~~~--------------~~~~--------------------- 174 (314)
....+.+|+.+.|.|.+.. +.| .+.|..... ..+ ..+ +.+.
T Consensus 7 ~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V~~~ 85 (291)
T 1mq8_A 7 SKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWT 85 (291)
T ss_dssp SEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEEECBC
T ss_pred CccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEEEecC
Confidence 5667899999999999864 444 488873211 111 111 1000
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCc---eeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPAS---LNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSY 251 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p---~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y 251 (314)
|-.+.+.+....+.+|+.++|.|.+.|.+++ .|.|++++..+..... ... ...++|.+...+.+|.+.|
T Consensus 86 P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~------~~~--~~~~~l~~~~~~~D~g~~~ 157 (291)
T 1mq8_A 86 PERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA------VGE--PAEVTTTVLVRRDHHGANF 157 (291)
T ss_dssp CSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC------CBT--TEEEEEECCCSSSCSSCEE
T ss_pred CCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC------CCC--CceEEEEeeeeeccCCceE
Confidence 1122222333457889999999999886543 5899997543322210 011 1234777777777777799
Q ss_pred EEEEeeCCCC--------ceeEEEEEEEecCCCeeEEE---EccccccEeEEEEEeeccCC---Cccce
Q psy15734 252 RCVAVNALGE--------TDGFIKVYVNLVDGDIFQIR---KMSRLHMGAYLCIASNGVVP---SVSHR 306 (314)
Q Consensus 252 ~C~a~n~~g~--------~~~~~~l~V~~~~~~~~~~~---~~~~~~~g~~~C~a~~~~~~---~~~w~ 306 (314)
+|+|.|..+. .+....|.|...|.....+. ....++...++|.+.+.+++ .+.|.
T Consensus 158 ~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~ 226 (291)
T 1mq8_A 158 SCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLA 226 (291)
T ss_dssp EEEEEEECGGGTSCEEEECCCCEECBC------------------------------------------
T ss_pred EEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEE
Confidence 9999997652 35567788888754433322 23445556799999987654 47775
No 459
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.36 E-value=5e-12 Score=101.16 Aligned_cols=128 Identities=16% Similarity=0.222 Sum_probs=83.1
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecC-----CceeEEecCCC-e---eeec---------CCceeeeEeeCCeeeEEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFP-----ASLNYWTNEKG-D---MIIT---------GDDYEDSRLINGYSCHMT 237 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p-----~p~~~W~~~~~-~---~~~~---------~~~~~~~~~~~~~~~~s~ 237 (314)
+.+..++....+.+|++++|.|.+.+.| .+.+.|++++. . .+.. ..++.... .. ...+
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~ 110 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG-SG---TDFT 110 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE-ET---TEEE
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc-cC---CEEE
Confidence 3455556677899999999999999988 68999998542 1 1110 12222221 11 1348
Q ss_pred EEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC-CCeeEEEE----ccccccEeEEEEEeeccCC--CccceE
Q psy15734 238 LKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLVD-GDIFQIRK----MSRLHMGAYLCIASNGVVP--SVSHRI 307 (314)
Q Consensus 238 L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~-~~~~~~~~----~~~~~~g~~~C~a~~~~~~--~~~w~v 307 (314)
|.|.+++.+|+|.|+|.|.|..+.. .....|.|.... .+.+.+.. +..++...++|.+.+.+++ .+.|..
T Consensus 111 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 188 (252)
T 3bkj_L 111 LRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKI 188 (252)
T ss_dssp EEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEE
Confidence 9999999999999999999986532 233456665432 24444322 1233456799999996544 588853
No 460
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=6.3e-13 Score=90.19 Aligned_cols=90 Identities=18% Similarity=0.310 Sum_probs=65.3
Q ss_pred CCCCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCC
Q psy15734 18 KPDMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQET 97 (314)
Q Consensus 18 ~~~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 97 (314)
+..+|.|...+....+.+|+++.|.|.+.+.|.+.+.|++++.. +. .... .. . .....|.|.+++.+
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~-~~--------~~~~-~~-~--~~~~~L~i~~v~~~ 74 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQP-IQ--------YARS-TC-E--AGVAELHIQDALPE 74 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSB-CS--------SCCC-EE-E--TTEEEEEECSCCTT
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEE-Cc--------ccce-Ee-e--CCeEEEEECCCChh
Confidence 34578888888999999999999999999888889999995432 21 1111 11 1 11247999999999
Q ss_pred CCeEEEEEEecC-CCcceeEEEEE
Q psy15734 98 DRGWYMCQINTV-PMTSQKGYLQV 120 (314)
Q Consensus 98 d~G~Y~C~~~~~-~~~~~~~~l~v 120 (314)
|+|.|+|.+.|. +.....+.|.|
T Consensus 75 D~G~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 75 DHGTYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp CCBCEEEEEECSSCEEEEECCEEE
T ss_pred hCEEEEEEEEECCCeEEEEEEEEE
Confidence 999999999875 33344444444
No 461
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.36 E-value=5.7e-12 Score=100.65 Aligned_cols=128 Identities=16% Similarity=0.157 Sum_probs=83.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC----eeeec---------CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG----DMIIT---------GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~----~~~~~---------~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
.+..++....+.+|+++.|.|.+.+.|.+.+.|++.+. ..+.. ..++.... .. ...+|.|.++
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v 81 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG-SG---TDYSLTISNL 81 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE-ET---TEEEEEESSC
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC-CC---CEEEEEEccC
Confidence 45667777889999999999999999999999998531 11111 12222211 11 1348999999
Q ss_pred CCCCCeEEEEEEeeCCCCc-eeEEEEEEEecC------------------CCeeEE---EEccccccEeEEEEEeecc--
Q psy15734 244 LSHQFGSYRCVAVNALGET-DGFIKVYVNLVD------------------GDIFQI---RKMSRLHMGAYLCIASNGV-- 299 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~------------------~~~~~~---~~~~~~~~g~~~C~a~~~~-- 299 (314)
+.+|+|.|.|.|.|..+.. .....|.|...+ ...+.. ..+..++...+.|.+.+.+
T Consensus 82 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 161 (250)
T 3esu_F 82 EQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFS 161 (250)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGG
T ss_pred ChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCccc
Confidence 9999999999999976542 233455565421 111111 1234555667999999876
Q ss_pred CCCccceEE
Q psy15734 300 VPSVSHRIM 308 (314)
Q Consensus 300 ~~~~~w~v~ 308 (314)
.+.+.|...
T Consensus 162 ~~~v~W~k~ 170 (250)
T 3esu_F 162 SSWMNWVKQ 170 (250)
T ss_dssp GSEEEEEEE
T ss_pred CCEEEEEEE
Confidence 678899654
No 462
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.36 E-value=1.7e-12 Score=101.06 Aligned_cols=125 Identities=12% Similarity=0.042 Sum_probs=82.5
Q ss_pred cCCCcceeecCccEEEEEEEeec-------CCceeEEecCCCee-----eec-----------CCceeeeEeeCCeeeEE
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAF-------PASLNYWTNEKGDM-----IIT-----------GDDYEDSRLINGYSCHM 236 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~-------p~p~~~W~~~~~~~-----~~~-----------~~~~~~~~~~~~~~~~s 236 (314)
..+....+.+|+++.|.|.+.+. +.+.+.|++++... +.. ..++.+ ..+......
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~ 82 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRL--LGDVQKKNC 82 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEE--CSCGGGTBC
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEE--eccCCCCeE
Confidence 34566789999999999999864 57899999975421 110 112221 111101123
Q ss_pred EEEEeecCCCCCeEEEEEEeeCCCCc----eeEEEEEEEecCC-CeeEEE-EccccccEeEEEEEeec----cCCCccce
Q psy15734 237 TLKIRSILSHQFGSYRCVAVNALGET----DGFIKVYVNLVDG-DIFQIR-KMSRLHMGAYLCIASNG----VVPSVSHR 306 (314)
Q Consensus 237 ~L~i~~~~~~d~G~Y~C~a~n~~g~~----~~~~~l~V~~~~~-~~~~~~-~~~~~~~g~~~C~a~~~----~~~~~~w~ 306 (314)
+|.|.+++.+|+|.|.|.+.+..+.. ...+.|.|...+. +.+... .+..++...++|.|.+. |+|.++|.
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~ 162 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWT 162 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEE
T ss_pred EEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEe
Confidence 79999999999999999999976322 2467788877553 333222 23445556799999874 77899995
No 463
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.36 E-value=4.1e-12 Score=100.69 Aligned_cols=126 Identities=16% Similarity=0.135 Sum_probs=82.2
Q ss_pred EEcCCCcceeecCccEEEEEEEeecCCceeEEecCCC--ee--ee------------cCCceeeeEeeCCeeeEEEEEEe
Q psy15734 178 LTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKG--DM--II------------TGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 178 ~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~--~~--~~------------~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+...+....+.+|++++|.|. .+.|.+.+.|++++. .. +. ...++.+.. .+. ...+|.|.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~--~~~~L~I~ 78 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR-PSQ--ENFSLILE 78 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC-CSS--SBCEEEES
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc-cCC--ceEEEEEe
Confidence 455677788999999999999 788999999998521 10 10 012222221 111 12389999
Q ss_pred ecCCCCCeEEEEEEeeCCCCc-----eeEEEEEEEecCC----------CeeEE----EEccccccEeEEEEEeeccCCC
Q psy15734 242 SILSHQFGSYRCVAVNALGET-----DGFIKVYVNLVDG----------DIFQI----RKMSRLHMGAYLCIASNGVVPS 302 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~----------~~~~~----~~~~~~~~g~~~C~a~~~~~~~ 302 (314)
+++.+|+|.|+|.|.|..|.. .....|.|...+. ..+.. ..+..++...+.|.+.+.+.|.
T Consensus 79 ~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~ 158 (238)
T 2p1y_A 79 LATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDY 158 (238)
T ss_dssp SCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCE
T ss_pred cCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCc
Confidence 999999999999999986632 1334566655432 02222 1345566678999999999899
Q ss_pred ccceE
Q psy15734 303 VSHRI 307 (314)
Q Consensus 303 ~~w~v 307 (314)
+.|.-
T Consensus 159 i~W~k 163 (238)
T 2p1y_A 159 FPWYQ 163 (238)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 464
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.36 E-value=1.4e-11 Score=98.92 Aligned_cols=129 Identities=12% Similarity=0.091 Sum_probs=85.1
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCe----eee----------cCCceeeeEeeCCeeeEEEEEEe
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGD----MII----------TGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~----~~~----------~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
..+..++....+.+|+++.|.|.+.+.|.+.+.|++.... .+. ...++.+...... ...+|.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSD--SSFHLRKA 81 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTT--TEEEEEES
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCC--CEEEEEEC
Confidence 3466777888999999999999999999999999983211 111 1122222211111 23489999
Q ss_pred ecCCCCCeEEEEEEeeCCCCce----eEEEEEEEec------------------CCCeeEEE----EccccccEeEEEEE
Q psy15734 242 SILSHQFGSYRCVAVNALGETD----GFIKVYVNLV------------------DGDIFQIR----KMSRLHMGAYLCIA 295 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~----~~~~l~V~~~------------------~~~~~~~~----~~~~~~~g~~~C~a 295 (314)
+++.+|+|.|+|.+.|..+... ....|.|... ..+.+... .+..++...+.|.+
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 161 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQ 161 (256)
T ss_dssp SCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEE
T ss_pred CCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEc
Confidence 9999999999999999865332 2346666641 11222221 23355666799999
Q ss_pred eeccCCCccceE
Q psy15734 296 SNGVVPSVSHRI 307 (314)
Q Consensus 296 ~~~~~~~~~w~v 307 (314)
.+. .+.+.|.-
T Consensus 162 ~~~-~~~v~W~k 172 (256)
T 3tf7_C 162 TNS-HNYMYWYR 172 (256)
T ss_dssp CSC-CSEEEEEE
T ss_pred CCC-ceEEEEEE
Confidence 887 67899954
No 465
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=2.3e-12 Score=92.71 Aligned_cols=92 Identities=15% Similarity=0.230 Sum_probs=63.6
Q ss_pred CcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeE-------------------EEeeeeee-ecCcCEEEEeCCceeE
Q psy15734 28 VANVTATVGKEALMACVVENLREYKVAWVKMITQTI-------------------LSIHHKVV-TQNKRVSITFNDHRSW 87 (314)
Q Consensus 28 ~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~-------------------~~~~~~~~-~~~~~~~~~~~~~~~~ 87 (314)
+..+.+.+|+++.|.|.+.|.|.+.+.|++++.... .......+ ....++.+...+. ..
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~-~s 103 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD-RS 103 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT-EE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC-EE
Confidence 678999999999999999999999999999762100 00000001 2334555554332 23
Q ss_pred EEEEeeecCCCCeEEEEEEecC-CCcceeEEEEE
Q psy15734 88 FLHLRDVQETDRGWYMCQINTV-PMTSQKGYLQV 120 (314)
Q Consensus 88 ~L~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~l~v 120 (314)
.|.|.+++.+|+|.|+|.+.|. +.....+.|.|
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEE
Confidence 7999999999999999999876 44444555555
No 466
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.36 E-value=4.6e-12 Score=101.75 Aligned_cols=123 Identities=18% Similarity=0.125 Sum_probs=81.0
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCCC--e--eeec-------------CCceeeeEeeCCeeeEEEEEEeec
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG--D--MIIT-------------GDDYEDSRLINGYSCHMTLKIRSI 243 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~--~--~~~~-------------~~~~~~~~~~~~~~~~s~L~i~~~ 243 (314)
....+.+|++++|.|.+.+.| .+.+.|++++. . .+.. ..++.+..... ....+|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I~~v 85 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTS--KNQVFLKMNSL 85 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETT--TTEEEEEEESC
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECC--CCEEEEEECCC
Confidence 345799999999999999985 78999998521 1 1110 12333322111 12348999999
Q ss_pred CCCCCeEEEEEEeeCCCC------c---eeEEEEEEEecCC------------C-eeEE----EEccccccEeEEEEEee
Q psy15734 244 LSHQFGSYRCVAVNALGE------T---DGFIKVYVNLVDG------------D-IFQI----RKMSRLHMGAYLCIASN 297 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~g~------~---~~~~~l~V~~~~~------------~-~~~~----~~~~~~~~g~~~C~a~~ 297 (314)
+.+|+|.|+|.|.|..|. . .....|.|...+. + .+.. ..+..++...+.|.+.+
T Consensus 86 ~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~ 165 (257)
T 1f3r_B 86 QTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQ 165 (257)
T ss_dssp CTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSS
T ss_pred CcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECC
Confidence 999999999999998641 1 1334666765431 1 1111 12445566679999999
Q ss_pred ccCCCccceE
Q psy15734 298 GVVPSVSHRI 307 (314)
Q Consensus 298 ~~~~~~~w~v 307 (314)
.+++.+.|.-
T Consensus 166 ~~~~~v~W~k 175 (257)
T 1f3r_B 166 NINNYLAWYQ 175 (257)
T ss_dssp CCBTCEEEEE
T ss_pred cCCCcEEEEE
Confidence 9888999965
No 467
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.35 E-value=4.5e-12 Score=99.22 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=80.1
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC-ee---eec----------------CCceeeeEeeCCeeeEEEEE
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-DM---IIT----------------GDDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~~---~~~----------------~~~~~~~~~~~~~~~~s~L~ 239 (314)
+....+.+|+++.|.|.+.+.| .+.+.|++++. .. +.. ..++.+..... .....|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 84 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDS--KSSVYLQ 84 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGG--GTEEEEE
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCC--CCeEEEE
Confidence 4456889999999999999876 78999998531 11 110 12222222111 1234899
Q ss_pred EeecCCCCCeEEEEEEeeCCCCc---eeEEEEEEEec--CCCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 240 IRSILSHQFGSYRCVAVNALGET---DGFIKVYVNLV--DGDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~V~~~--~~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
|.+++.+|+|.|.|.+.|..+.. .....|.|... ..+.+.+.. +..++...+.|.|.+. |.| .+.|.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 162 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWN 162 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEG
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEe
Confidence 99999999999999999976431 13456666532 223333221 2344556799999998 778 89995
No 468
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.35 E-value=5.4e-12 Score=98.49 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=77.5
Q ss_pred CCcceeecCccEEEEEEE-eecC-CceeEEecCCC-eee---ec---------CCceeeeEeeCCeeeEEEEEEeecCCC
Q psy15734 182 NQLEGAFVSQTVELHCHT-EAFP-ASLNYWTNEKG-DMI---IT---------GDDYEDSRLINGYSCHMTLKIRSILSH 246 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~-~g~p-~p~~~W~~~~~-~~~---~~---------~~~~~~~~~~~~~~~~s~L~i~~~~~~ 246 (314)
+....+.+|+++.|.|.+ .+.+ .+.+.|++++. ... .. ..++.... .. ...+|.|.+++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~---~~~~L~I~~v~~~ 82 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK-SG---TSATLGITGLQTG 82 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE-ET---TEEEEEECSCCGG
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec-cC---CEEEEEECCCCcc
Confidence 566789999999999995 4443 68999998542 111 10 12222221 11 2348999999999
Q ss_pred CCeEEEEEEeeCCC--CceeEEEEEEEecC-CCeeEEEEc----cccccEeEEEEEeeccCC--CccceE
Q psy15734 247 QFGSYRCVAVNALG--ETDGFIKVYVNLVD-GDIFQIRKM----SRLHMGAYLCIASNGVVP--SVSHRI 307 (314)
Q Consensus 247 d~G~Y~C~a~n~~g--~~~~~~~l~V~~~~-~~~~~~~~~----~~~~~g~~~C~a~~~~~~--~~~w~v 307 (314)
|+|.|+|.|.|..+ .......|.|...+ .+.+.+... ..++...+.|.+.+++++ .+.|..
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 152 (216)
T 2xzc_L 83 DEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV 152 (216)
T ss_dssp GCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred cCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEE
Confidence 99999999999876 12234456665432 233333221 123456799999995543 788953
No 469
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.35 E-value=1.1e-11 Score=99.46 Aligned_cols=126 Identities=15% Similarity=0.060 Sum_probs=80.7
Q ss_pred cCCCcceeecCccEEEEEEEeec--CCceeEEecCCC---eeee--------------cCCceeeeEeeCCeeeEEEEEE
Q psy15734 180 IPNQLEGAFVSQTVELHCHTEAF--PASLNYWTNEKG---DMII--------------TGDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 180 ~~~~~~~v~~g~~~~l~C~~~g~--p~p~~~W~~~~~---~~~~--------------~~~~~~~~~~~~~~~~~s~L~i 240 (314)
..+....+.+|++++|.|.+.+. |.+.+.|++.+. .... ...++.+..... ....+|.|
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I 90 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTS--KNQVYLQL 90 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGG--GTEEEEEE
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecC--CceEEEEE
Confidence 34455678999999999999994 578999998421 1111 012222221111 12348999
Q ss_pred eecCCCCCeEEEEEEeeCCCC----ceeEEEEEEEec------------CCCeeEE----EEccccccEeEEEEEeeccC
Q psy15734 241 RSILSHQFGSYRCVAVNALGE----TDGFIKVYVNLV------------DGDIFQI----RKMSRLHMGAYLCIASNGVV 300 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~------------~~~~~~~----~~~~~~~~g~~~C~a~~~~~ 300 (314)
.+++.+|+|.|+|.|.|..+. ......|.|... +.+.+.. ..+..++...+.|.+.+.+.
T Consensus 91 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 170 (257)
T 3gkz_A 91 KSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVS 170 (257)
T ss_dssp CSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCC
T ss_pred CCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCcc
Confidence 999999999999999997322 223456666654 1222221 23455666779999999887
Q ss_pred C-CccceE
Q psy15734 301 P-SVSHRI 307 (314)
Q Consensus 301 ~-~~~w~v 307 (314)
+ .+.|.-
T Consensus 171 ~~~v~W~k 178 (257)
T 3gkz_A 171 SSHLYWYQ 178 (257)
T ss_dssp GGGEEEEE
T ss_pred ceEEEEEE
Confidence 7 899964
No 470
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.34 E-value=9.6e-12 Score=100.25 Aligned_cols=129 Identities=19% Similarity=0.220 Sum_probs=86.1
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeecC------CceeEEecCC-Ce---eeec---------CCceeeeEeeCCeeeEE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAFP------ASLNYWTNEK-GD---MIIT---------GDDYEDSRLINGYSCHM 236 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~p------~p~~~W~~~~-~~---~~~~---------~~~~~~~~~~~~~~~~s 236 (314)
+.+...+....+.+|++++|.|.+.+.| .+.+.|++.+ +. .+.. ..++.+.. .. ...
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~-~~---~~~ 81 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG-SG---TDF 81 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE-ET---TEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec-CC---CEE
Confidence 4456667778899999999999999988 7899999853 11 1111 12333321 11 134
Q ss_pred EEEEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEecCC----------------CeeEEE-----EccccccEeEEEE
Q psy15734 237 TLKIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLVDG----------------DIFQIR-----KMSRLHMGAYLCI 294 (314)
Q Consensus 237 ~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~----------------~~~~~~-----~~~~~~~g~~~C~ 294 (314)
.|.|.+++.+|+|.|.|.+.|..+.. .....|.|...+. +.+.+. .+..++...+.|.
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 161 (264)
T 2gjj_A 82 TLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCK 161 (264)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEE
T ss_pred EEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEE
Confidence 89999999999999999999876432 2345677766531 122221 3445566679999
Q ss_pred EeeccC--CCccceEE
Q psy15734 295 ASNGVV--PSVSHRIM 308 (314)
Q Consensus 295 a~~~~~--~~~~w~v~ 308 (314)
+.+.+. +.+.|.-.
T Consensus 162 ~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 162 ASGYSFTGYFINWVKK 177 (264)
T ss_dssp EESSCGGGSEEEEEEE
T ss_pred EeCCccCCeEEEEEEE
Confidence 998864 78999643
No 471
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.34 E-value=8.4e-12 Score=100.14 Aligned_cols=122 Identities=14% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC--ee--eec--------------CCceeeeEeeCCeeeEEEEEEe
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG--DM--IIT--------------GDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~--~~--~~~--------------~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+....+.+|++++|.|.+.+.| .+.+.|++.+. .. +.. ..++.+...... ...+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~~L~I~ 84 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPS--STAYMQLS 84 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTT--TEEEEEEC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCC--CEEEEEEC
Confidence 4456889999999999999886 68999998421 11 110 123333221111 13489999
Q ss_pred ecCCCCCeEEEEEEeeCCCC---c--eeEEEEEEEecCCCeeEE----EEccccccEeEEEEEeeccCC-----CccceE
Q psy15734 242 SILSHQFGSYRCVAVNALGE---T--DGFIKVYVNLVDGDIFQI----RKMSRLHMGAYLCIASNGVVP-----SVSHRI 307 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~---~--~~~~~l~V~~~~~~~~~~----~~~~~~~~g~~~C~a~~~~~~-----~~~w~v 307 (314)
+++.+|+|.|.|.|.|..|. . ...+.|.|... +.+.. ..+..++...+.|.+.+.+++ .+.|..
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~--~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k 162 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD--IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYL 162 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC--CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEE
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeeccc--ccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEE
Confidence 99999999999999998763 1 23355666533 22222 134556667899999998865 899965
No 472
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.34 E-value=2.7e-10 Score=87.41 Aligned_cols=132 Identities=19% Similarity=0.339 Sum_probs=75.9
Q ss_pred ceEEEcCCcEEEEEEecCCC--ceEEEEEEcC-ceeEEEeee------e-ee--ecCcCEEEEeCCc-eeEEEEEeeecC
Q psy15734 30 NVTATVGKEALMACVVENLR--EYKVAWVKMI-TQTILSIHH------K-VV--TQNKRVSITFNDH-RSWFLHLRDVQE 96 (314)
Q Consensus 30 ~~~v~~g~~~~l~C~~~~~~--~~~v~W~~~~-~~~~~~~~~------~-~~--~~~~~~~~~~~~~-~~~~L~i~~~~~ 96 (314)
.-.+.+|+++.|.|.+++.. ...+.|+|.. ++-++-... . .+ .-.+|+.+..+.. +...|.+.+++.
T Consensus 9 ~~lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~ 88 (254)
T 4f9p_D 9 AEVVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTS 88 (254)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CceECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCC
Confidence 44588899999999998854 4679999863 222211100 0 01 1235888876644 345799999999
Q ss_pred CCCeEEEEEEecCCCc-ceeEEEEEEe----CC---------------ceeeecCcceeEEecCceEEEEEEecccCCCc
Q psy15734 97 TDRGWYMCQINTVPMT-SQKGYLQVVV----PP---------------RILLDRTSTDVVVREGTEVTLECSAVGYPEPY 156 (314)
Q Consensus 97 ~d~G~Y~C~~~~~~~~-~~~~~l~v~~----~p---------------~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~ 156 (314)
+|++.|+|.-...... -.-..+.|.. .| .+.....+....+..|+.++|.|.+...-...
T Consensus 89 eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~~~ 168 (254)
T 4f9p_D 89 DDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSISNN 168 (254)
T ss_dssp GGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCTTC
T ss_pred CCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcccCC
Confidence 9999999975221100 0011233321 11 11111123445567777777777765433345
Q ss_pred eEEEc
Q psy15734 157 VAWRR 161 (314)
Q Consensus 157 ~~W~~ 161 (314)
+.|++
T Consensus 169 l~Wyq 173 (254)
T 4f9p_D 169 LHWYR 173 (254)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 77776
No 473
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.34 E-value=9.8e-13 Score=103.10 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=80.9
Q ss_pred CCcceeecCccEEEEEEEee-cCCce----eEEecCCCeeeec------------CCceeeeEee-CCeeeEEEEEEeec
Q psy15734 182 NQLEGAFVSQTVELHCHTEA-FPASL----NYWTNEKGDMIIT------------GDDYEDSRLI-NGYSCHMTLKIRSI 243 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g-~p~p~----~~W~~~~~~~~~~------------~~~~~~~~~~-~~~~~~s~L~i~~~ 243 (314)
+....+.+|+++.|.|.+.+ .+.+. +.|++++...... ..+..+.... .......+|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 45567889999999999954 55444 8999975321110 1122211100 00001238999999
Q ss_pred CCCCCeEEEEEEeeCC-CCceeEEEEEEEecCCCeeEEEEcc-ccccE-eEEEEEe-eccCCCccce
Q psy15734 244 LSHQFGSYRCVAVNAL-GETDGFIKVYVNLVDGDIFQIRKMS-RLHMG-AYLCIAS-NGVVPSVSHR 306 (314)
Q Consensus 244 ~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~~-~~~~g-~~~C~a~-~~~~~~~~w~ 306 (314)
+.+|+|.|+|.+.|.. +.....+.|.|..+|...+...... .++.. .++|.+. +.|.|.++|.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~ 152 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWH 152 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEE
Confidence 9999999999999977 7778888888877543332222221 22333 4999998 7888899994
No 474
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.34 E-value=1.2e-12 Score=105.74 Aligned_cols=126 Identities=12% Similarity=0.077 Sum_probs=81.6
Q ss_pred eEEcCCCcceeecCccEEEEEEEe---ecCCceeEEecCCCeeeec-----------------CCceeeeEeeCCeeeEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTE---AFPASLNYWTNEKGDMIIT-----------------GDDYEDSRLINGYSCHM 236 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~---g~p~p~~~W~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~s 236 (314)
.+..++....+.+|+++.|.|.+. +.|.+.+.|++++...... ..+..+ ..+......
T Consensus 7 ~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~ 84 (268)
T 3mj6_A 7 GLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHL--VGDTFHNDG 84 (268)
T ss_dssp -----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEE--CSCTTTTBC
T ss_pred ccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEE--eecCCCCEE
Confidence 445566778899999999999998 7888899999964321100 011111 000001113
Q ss_pred EEEEeecCCCCCeEEEEEEeeCCCCcee--EEEEEEEecCCCeeEEEEccccccEeEEEEE---eeccCCCccceE
Q psy15734 237 TLKIRSILSHQFGSYRCVAVNALGETDG--FIKVYVNLVDGDIFQIRKMSRLHMGAYLCIA---SNGVVPSVSHRI 307 (314)
Q Consensus 237 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~g~~~C~a---~~~~~~~~~w~v 307 (314)
+|.|.+++.+|+|.|+|.|.|..+.... .+.|.|...... ...+..++...+.|.+ .+.+.|.+.|..
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~---~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~ 157 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPR---DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMF 157 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCS---EEEEETTCCEEECCBCEESSSSCCCEEEEEE
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCC---ccccccCCcEEEEEEecCCCCCCccceEEEe
Confidence 8999999999999999999998766544 445555433222 2234556677899999 556888999976
No 475
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.34 E-value=5.1e-12 Score=99.58 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=78.3
Q ss_pred CCcceeecCccEEEEEEEeecCC----ceeEEecCC-Ce---eeec-------------CCceeeeEeeCCeeeEEEEEE
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFPA----SLNYWTNEK-GD---MIIT-------------GDDYEDSRLINGYSCHMTLKI 240 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p~----p~~~W~~~~-~~---~~~~-------------~~~~~~~~~~~~~~~~s~L~i 240 (314)
+....+.+|++++|.|.+.+.|. +.+.|++.+ +. .+.. ..++.+..... .....|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I 84 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTS--RDMVFMKI 84 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETT--TTEEEEEE
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCC--CCeEEEEE
Confidence 45568899999999999999875 889999853 11 1111 11222221111 11358999
Q ss_pred eecCCCCCeEEEEEEeeCCC------C---ceeEEEEEEEec--CCCeeEEEE----ccccccEeEEEEEeec-cCC-Cc
Q psy15734 241 RSILSHQFGSYRCVAVNALG------E---TDGFIKVYVNLV--DGDIFQIRK----MSRLHMGAYLCIASNG-VVP-SV 303 (314)
Q Consensus 241 ~~~~~~d~G~Y~C~a~n~~g------~---~~~~~~l~V~~~--~~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~ 303 (314)
.+++.+|+|.|.|.+.|..| . ....+.|.|... ..+.+.+.. +..++...+.|.|.++ |.| .+
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v 164 (228)
T 3bae_H 85 TSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTL 164 (228)
T ss_dssp CSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEE
T ss_pred cCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEE
Confidence 99999999999999999765 1 112356777632 123333221 2334455799999987 666 88
Q ss_pred cce
Q psy15734 304 SHR 306 (314)
Q Consensus 304 ~w~ 306 (314)
+|.
T Consensus 165 ~W~ 167 (228)
T 3bae_H 165 TWN 167 (228)
T ss_dssp EEG
T ss_pred EEe
Confidence 885
No 476
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.34 E-value=1.2e-11 Score=100.10 Aligned_cols=164 Identities=13% Similarity=0.119 Sum_probs=78.3
Q ss_pred ecCCCCeEEEEEEecCCCc-ceeEEEEEEeCCceeeecCcceeEEecCceEEEEEEecccCCCceEEEcCCCceeecCCe
Q psy15734 94 VQETDRGWYMCQINTVPMT-SQKGYLQVVVPPRILLDRTSTDVVVREGTEVTLECSAVGYPEPYVAWRREDGKAINYNGE 172 (314)
Q Consensus 94 ~~~~d~G~Y~C~~~~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~~~W~~~~~~~~~~~~~ 172 (314)
.+++|.+.|.|.+.+.... .....+.|..+ +....+.+|++++|.|.+.+ +.+.+.|++.+.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~--------p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~-------- 65 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQT--------PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNK-------- 65 (270)
T ss_dssp -------------------------CCCEEE--------CSEEEEETTSCEEEEEECCT-TCCEEEEEEECT--------
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeC--------CCeEEEcCCCCEEEEEEecC-CCceEEEEEECC--------
Confidence 3578999999998654222 22222222222 34567889999999999765 678999998321
Q ss_pred eCCCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC----ceeeeEeeCCeeeEEEEEEeecCCCCC
Q psy15734 173 LVPPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD----DYEDSRLINGYSCHMTLKIRSILSHQF 248 (314)
Q Consensus 173 ~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~----~~~~~~~~~~~~~~s~L~i~~~~~~d~ 248 (314)
|.... .+.+..+ +....... ++.+.... ....+|.|.+++.+|+
T Consensus 66 -----------------~~~~~-----------~~~~~~~-~~~~~~~~~~~~r~~~~~~~---~~~~sL~I~~v~~~D~ 113 (270)
T 3qib_D 66 -----------------NNEFK-----------FLINFQN-QEVLQQIDMTEKRFSAECPS---NSPCSLEIQSSEAGDS 113 (270)
T ss_dssp -----------------TCCEE-----------EEEEEET-TEEEEECHHHHHHEEEECCT---TSCEEEEESSCCGGGC
T ss_pred -----------------CCCcE-----------EEEEECC-CCceecCCccCCcEEEEeCC---CcEEEEEECCCCHhHC
Confidence 11111 1112221 11111110 22222111 1134999999999999
Q ss_pred eEEEEEEeeCCC----CceeEEEEEEEecC----CCeeEEEEc-----cccccEeEEEEEeec-cCC-Cccce
Q psy15734 249 GSYRCVAVNALG----ETDGFIKVYVNLVD----GDIFQIRKM-----SRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 249 G~Y~C~a~n~~g----~~~~~~~l~V~~~~----~~~~~~~~~-----~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
|.|.|.+.+..+ .......|.|.... .+.+.+... ..++...++|.+.++ |.| .+.|.
T Consensus 114 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 186 (270)
T 3qib_D 114 ALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 186 (270)
T ss_dssp EEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred eEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEE
Confidence 999999997432 22234566676521 233333222 124556799999994 445 67884
No 477
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.34 E-value=2.9e-12 Score=111.17 Aligned_cols=96 Identities=20% Similarity=0.364 Sum_probs=75.7
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCC-ceeeeEeeCCeeeEEEEEEeecCCCCCeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGD-DYEDSRLINGYSCHMTLKIRSILSHQFGSYRC 253 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C 253 (314)
+|.+..++....+.+|++++|.|.+ +.|.|.+.|+++++....... ..+.....++ +|.|.+++.+|+|.|+|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~-----~L~I~~v~~~D~G~Y~C 414 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDG-----TLNFTNVTVQDTGMYTC 414 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTC-----CEEESSCCSTTCEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCC-----eEEEccCChhhCEEEEE
Confidence 6778888888899999999999999 679999999997666554332 1233334455 89999999999999999
Q ss_pred EEeeCCCCceeEEEEEEEecCCC
Q psy15734 254 VAVNALGETDGFIKVYVNLVDGD 276 (314)
Q Consensus 254 ~a~n~~g~~~~~~~l~V~~~~~~ 276 (314)
.|.|..|..++++.+.|...+++
T Consensus 415 ~a~N~~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 415 MVSNSVGNTTASATLNVTGTHHH 437 (440)
T ss_dssp EEECSSCEEEEEEEEEEC-----
T ss_pred EEEcCCCcEEEEEEEEEeccccc
Confidence 99999999999999999877654
No 478
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.34 E-value=4.8e-12 Score=86.41 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=63.8
Q ss_pred CCCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCE--EEEe--CCceeEEEEEeeec
Q psy15734 20 DMPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRV--SITF--NDHRSWFLHLRDVQ 95 (314)
Q Consensus 20 ~~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~L~i~~~~ 95 (314)
.+|++..-.. ...|..+.|.|.+.|.|.+.+.|++++ ..+. .+.++ .+.. .....+.|.|.+++
T Consensus 3 ~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g-~~l~--------~~~~~~~~~~~~~~~~~~~~L~I~~v~ 70 (103)
T 1wwb_X 3 FAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNG-AILN--------ESKYICTKIHVTNHTEYHGCLQLDNPT 70 (103)
T ss_dssp CCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETT-EEEC--------CCSSEEEEEEEECSSEEEEEEEEESCC
T ss_pred CCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECC-EECC--------CCCcEeEEEEecCCcEEEEEEEECCCC
Confidence 4566542222 235788999999999999999999954 4332 12222 1111 11223469999999
Q ss_pred CCCCeEEEEEEecC-CCcceeEEEEEEeCCc
Q psy15734 96 ETDRGWYMCQINTV-PMTSQKGYLQVVVPPR 125 (314)
Q Consensus 96 ~~d~G~Y~C~~~~~-~~~~~~~~l~v~~~p~ 125 (314)
.+|+|.|+|.+.|. |.....+.|.|..+|.
T Consensus 71 ~~D~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 71 HMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEECCSCCCC
T ss_pred cccCEEEEEEEEeCCCcEeEEEEEEECCCCC
Confidence 99999999999876 5556667777776664
No 479
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.33 E-value=9.1e-12 Score=99.89 Aligned_cols=131 Identities=15% Similarity=0.187 Sum_probs=85.8
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEee--cCCceeEEecCC-Ce---eee--c------------CCceeeeEeeCCeee
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEA--FPASLNYWTNEK-GD---MII--T------------GDDYEDSRLINGYSC 234 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g--~p~p~~~W~~~~-~~---~~~--~------------~~~~~~~~~~~~~~~ 234 (314)
++.+..++....+.+|++++|.|.+.+ .|.+.+.|++.. +. .+. . ..++.+...... .
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~ 83 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSA--N 83 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTT--T
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCC--C
Confidence 456667778889999999999999998 477899999742 11 010 0 112322211111 2
Q ss_pred EEEEEEeecCCCCCeEEEEEEeeC------------CCCceeEEEEEEEecCC-------------CeeEE----EEccc
Q psy15734 235 HMTLKIRSILSHQFGSYRCVAVNA------------LGETDGFIKVYVNLVDG-------------DIFQI----RKMSR 285 (314)
Q Consensus 235 ~s~L~i~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~V~~~~~-------------~~~~~----~~~~~ 285 (314)
..+|.|.+++.+|+|.|.|.+.|. .+.......|.|...+. +.+.. ..+..
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 163 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSP 163 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECT
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeC
Confidence 347999999999999999999997 22234455676765422 11221 23445
Q ss_pred cccEeEEEEEeeccC-CCccceE
Q psy15734 286 LHMGAYLCIASNGVV-PSVSHRI 307 (314)
Q Consensus 286 ~~~g~~~C~a~~~~~-~~~~w~v 307 (314)
++...+.|.+.+.+. +.+.|.-
T Consensus 164 G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 164 GERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp TSCEEEEEEESSCCTTCCEEEEE
T ss_pred CCCEEEEEEECCCcCCeeEEEEE
Confidence 566679999999876 8999954
No 480
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.33 E-value=1.2e-11 Score=97.00 Aligned_cols=123 Identities=14% Similarity=0.092 Sum_probs=78.8
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCCC-e---eeec--------------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-D---MIIT--------------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~---~~~~--------------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
....+.+|+++.|.|.+.+.+ .+.+.|++.+. . .+.. ..++.+..... ....+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I~~ 85 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNS--KNTLYLQMNS 85 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETT--TTEEEEEECS
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCC--CCEEEEEECC
Confidence 467899999999999999876 57899998531 1 1110 12222221111 1135899999
Q ss_pred cCCCCCeEEEEEEeeCCCC------ceeEEEEEEEec--CCCeeEEEE----ccccccEeEEEEEeec-cCC-CccceE
Q psy15734 243 ILSHQFGSYRCVAVNALGE------TDGFIKVYVNLV--DGDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHRI 307 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~------~~~~~~l~V~~~--~~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~v 307 (314)
++.+|+|.|.|.+.|..|. ....+.|.|... ..+.+.+.. +..++...+.|.+.++ |.| .++|..
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 164 (223)
T 1dee_B 86 LRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKY 164 (223)
T ss_dssp CCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEE
T ss_pred CCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEc
Confidence 9999999999999987531 113346777642 223333222 1233455799999997 556 888965
No 481
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.33 E-value=3.6e-12 Score=102.47 Aligned_cols=133 Identities=10% Similarity=0.060 Sum_probs=74.1
Q ss_pred CCeEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC---Cee-eecCC----------ce--eeeEeeCCeeeEEEE
Q psy15734 175 PPMLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK---GDM-IITGD----------DY--EDSRLINGYSCHMTL 238 (314)
Q Consensus 175 ~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~---~~~-~~~~~----------~~--~~~~~~~~~~~~s~L 238 (314)
+|.+..++....+.+|++++|.|.+.+.|.+.+.|++.. ... +.... .+ +.....+......+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 355667778889999999999999999999999999832 111 11100 00 000011111123479
Q ss_pred EEeecCCCCCeEEEEEEeeCCCC---ceeEEEEEEEecCC---------------CeeEE----EEccccccEeEEEEEe
Q psy15734 239 KIRSILSHQFGSYRCVAVNALGE---TDGFIKVYVNLVDG---------------DIFQI----RKMSRLHMGAYLCIAS 296 (314)
Q Consensus 239 ~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~---------------~~~~~----~~~~~~~~g~~~C~a~ 296 (314)
.|.+++.+|+|.|.|.+.|..+. ......|.|..... +.+.. ..+..++...+.|.+.
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 161 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYE 161 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEE
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECC
Confidence 99999999999999999998762 33445666765421 11111 1234556667999998
Q ss_pred ec-cCCCccceE
Q psy15734 297 NG-VVPSVSHRI 307 (314)
Q Consensus 297 ~~-~~~~~~w~v 307 (314)
+. +.+.+.|.-
T Consensus 162 ~~~~~~~v~W~k 173 (259)
T 3omz_A 162 TSWWSYYIFWYK 173 (259)
T ss_dssp CCCSSCEEEEEE
T ss_pred CccCCceEEEee
Confidence 75 677899953
No 482
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.33 E-value=7.5e-12 Score=97.33 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=79.9
Q ss_pred CCCcceeecCccEEEEEEEeecCCc---eeEEecCCCeeeecC-----Cce----------eeeEeeC-CeeeEEEEEEe
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPAS---LNYWTNEKGDMIITG-----DDY----------EDSRLIN-GYSCHMTLKIR 241 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p---~~~W~~~~~~~~~~~-----~~~----------~~~~~~~-~~~~~s~L~i~ 241 (314)
.+..+.+.+|+++.|.|.+.+.|.+ .+.|++++....... ... +...... ......+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 3456788999999999999998876 478998654321110 000 0000000 01112379999
Q ss_pred ecCCCCCeEEEEEEeeCCCCcee-EEEEEEEecCCCeeEEE---EccccccEeEEEEEeeccCCCccce
Q psy15734 242 SILSHQFGSYRCVAVNALGETDG-FIKVYVNLVDGDIFQIR---KMSRLHMGAYLCIASNGVVPSVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~---~~~~~~~g~~~C~a~~~~~~~~~w~ 306 (314)
+++.+|+|.|.|.+.+..+.... ...+.+...+....... .+.......+.|.+.+.|+|.|+|.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~ 153 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWD 153 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEE
Confidence 99999999999999987765543 34444444433333221 2233334469999999999999995
No 483
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.33 E-value=1.4e-11 Score=97.04 Aligned_cols=123 Identities=11% Similarity=0.055 Sum_probs=76.7
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC-ee---ee--c------------CCceeeeEeeCCeeeEEEEEEe
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-DM---II--T------------GDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~~---~~--~------------~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+....+.+|++++|.|.+.+.| .+.+.|++.+. .. +. . ..++.+...... ...+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~sL~I~ 84 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSS--STAYMQLS 84 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTT--TEEEEEEC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCC--CeEEEEEC
Confidence 4556799999999999999887 68999998641 11 10 0 123332221111 23489999
Q ss_pred ecCCCCCeEEEEEEeeCCCC-ceeEEEEEEEec--CCCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 242 SILSHQFGSYRCVAVNALGE-TDGFIKVYVNLV--DGDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~--~~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
+++.+|+|.|.|.+.|..+. ....+.|.|... ..+.+.+.. +..++...+.|.|.++ |.| .+.|.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 158 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWN 158 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEG
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEe
Confidence 99999999999999986321 122346677642 123333221 2234455799999986 555 88884
No 484
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.33 E-value=6.6e-13 Score=90.26 Aligned_cols=91 Identities=14% Similarity=0.232 Sum_probs=61.1
Q ss_pred CCceecCC----cceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecC
Q psy15734 21 MPRFAEPV----ANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQE 96 (314)
Q Consensus 21 ~p~~~~~~----~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 96 (314)
+|.|..++ ..+.+.+|+++.|.|.+.+.+.+.+.|++++ ..+... .....+.... ..+.|.|.+++.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~-~~~~~~-----~~~~~~~~~~---~~~~L~i~~v~~ 74 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG-KEFKQE-----HRIGGYKVRN---QHWSLIMESVVP 74 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETT-EECCGG-----GSTTCCEEEG---GGTEEEECSCCG
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECC-EEcccc-----cccccEEEec---CeEEEEEccCCc
Confidence 46666443 5678999999999999998888999999954 322110 0001122221 123799999999
Q ss_pred CCCeEEEEEEecC-CCcceeEEEEE
Q psy15734 97 TDRGWYMCQINTV-PMTSQKGYLQV 120 (314)
Q Consensus 97 ~d~G~Y~C~~~~~-~~~~~~~~l~v 120 (314)
+|+|.|+|.+.|. +.....+.|.|
T Consensus 75 ~D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 75 SDKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEeCCCEEEEEEEEEE
Confidence 9999999999775 33344444544
No 485
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.32 E-value=1.1e-11 Score=98.58 Aligned_cols=126 Identities=16% Similarity=0.100 Sum_probs=80.0
Q ss_pred eEEcCCCcceeecCccEEEEEEEeecCCceeEEecCC-------------CeeeecC----CceeeeEeeCCeeeEEEEE
Q psy15734 177 MLTIPNQLEGAFVSQTVELHCHTEAFPASLNYWTNEK-------------GDMIITG----DDYEDSRLINGYSCHMTLK 239 (314)
Q Consensus 177 ~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~-------------~~~~~~~----~~~~~~~~~~~~~~~s~L~ 239 (314)
.+..++....+.+|+++.|.| ..+.|.+.+.|++.. +...... .++.+.... ....+|.
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~sL~ 79 (245)
T 4ei6_B 4 KVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPD---GSYFTLK 79 (245)
T ss_dssp CCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCT---TSCEEEE
T ss_pred ceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEecc---CceEEEE
Confidence 455567778899999999999 778889999999821 1111111 333322111 1234899
Q ss_pred EeecCCCCCeEEEEEEeeCC----CCceeEEEEEEEec----CCCeeEEEEc-----cccccEeEEEEEeeccCC--Ccc
Q psy15734 240 IRSILSHQFGSYRCVAVNAL----GETDGFIKVYVNLV----DGDIFQIRKM-----SRLHMGAYLCIASNGVVP--SVS 304 (314)
Q Consensus 240 i~~~~~~d~G~Y~C~a~n~~----g~~~~~~~l~V~~~----~~~~~~~~~~-----~~~~~g~~~C~a~~~~~~--~~~ 304 (314)
|.+++.+|+|.|.|.+.+.. +.......|.|... ..+.+.+... ..++...+.|.+.+++++ .+.
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~ 159 (245)
T 4ei6_B 80 IQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELS 159 (245)
T ss_dssp ECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred ECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEE
Confidence 99999999999999999642 22234456677641 1233333221 124455799999996554 788
Q ss_pred ce
Q psy15734 305 HR 306 (314)
Q Consensus 305 w~ 306 (314)
|.
T Consensus 160 W~ 161 (245)
T 4ei6_B 160 WW 161 (245)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 486
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.32 E-value=1.7e-11 Score=95.93 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=79.0
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCCC-e---eeec--------------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-D---MIIT--------------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~---~~~~--------------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
....+.+|++++|.|.+.+.| .+.+.|++.+. . .+.. ..++.+.. +......+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~~~L~I~~ 85 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISR--DNAKNSLYLQMSK 85 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEE--CSSSCEEEEEECS
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEe--eCCCCEEEEEECC
Confidence 447889999999999999876 67899998531 1 1110 12222221 1111235899999
Q ss_pred cCCCCCeEEEEEEeeCCCC---ceeEEEEEEEecC--CCeeEEEE---ccccccEeEEEEEeec-cC--CCccce
Q psy15734 243 ILSHQFGSYRCVAVNALGE---TDGFIKVYVNLVD--GDIFQIRK---MSRLHMGAYLCIASNG-VV--PSVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~--~~~~~~~~---~~~~~~g~~~C~a~~~-~~--~~~~w~ 306 (314)
++.+|+|.|.|.+.|..+. ....+.|.|...+ .+.+.+.. +..++...+.|.+.++ |. +.+.|.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~ 160 (220)
T 2fbj_H 86 VRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCLIHDYFPSGTMNVTWG 160 (220)
T ss_dssp CCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEEEEEEBSCCCEEEEES
T ss_pred CChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEEEEeEECCCcEEEEEe
Confidence 9999999999999997542 1234567776532 23333322 2334455799999998 54 588884
No 487
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.31 E-value=1.4e-11 Score=86.94 Aligned_cols=100 Identities=13% Similarity=0.257 Sum_probs=65.7
Q ss_pred cCCcceEEEcCCcEEEEEEecC--CCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCC--ceeEEEEEeeecCCCCeE
Q psy15734 26 EPVANVTATVGKEALMACVVEN--LREYKVAWVKMITQTILSIHHKVVTQNKRVSITFND--HRSWFLHLRDVQETDRGW 101 (314)
Q Consensus 26 ~~~~~~~v~~g~~~~l~C~~~~--~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~ 101 (314)
.++..+.+.+|+++.|.|.+.+ .+.+.+.|++++...... ......+....... ...+.|.|.+++.+|+|.
T Consensus 13 ~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~ 88 (122)
T 3s35_X 13 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHK----KLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGL 88 (122)
T ss_dssp ESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHH----HHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEE
T ss_pred cCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCc----eeeeeccccccCCceeeEEEEEEECCCCcccCEE
Confidence 4566678999999999999987 455789999965421000 00011111111110 123479999999999999
Q ss_pred EEEEEecC-CCcceeEEEEEEeCCceeee
Q psy15734 102 YMCQINTV-PMTSQKGYLQVVVPPRILLD 129 (314)
Q Consensus 102 Y~C~~~~~-~~~~~~~~l~v~~~p~~~~~ 129 (314)
|+|.+.|. +.....+.|.|..+|.+...
T Consensus 89 Y~C~a~n~~g~~~~~~~l~V~~~p~i~~~ 117 (122)
T 3s35_X 89 YTCAASSGLMTKKNSTFVRVHEKPFVAFG 117 (122)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECC---
T ss_pred EEEEEccCCCceEEEEEEEEeccCeEEee
Confidence 99999875 45567788999888877654
No 488
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=3.9e-12 Score=86.76 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=60.1
Q ss_pred cceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCCCce
Q psy15734 184 LEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALGETD 263 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 263 (314)
...+.+|+++.|.|.+. .|.+.+.|+++ +..+....++.+..... ...|.|.++..+|+|.|+|.|.| ..
T Consensus 20 ~~~v~~G~~v~L~C~~~-~p~~~v~W~k~-g~~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~~----~~ 89 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA-QAQTEVTWYKD-GKKLSSSSKVRVEAVGC----TRRLVVQQAGQAEAGEYSCEAGG----QQ 89 (102)
T ss_dssp EEEEETTCCEEECCBCS-CSSSCCEEEET-TEECCCCSSEEEEEETT----EEEEEETTCCTTTCSCEEEEETT----EE
T ss_pred cEEEeCCCcEEEEEEec-CCCCceEEEEC-CEECCCCCCEEEEEcCC----EEEEEECCCCcccCEEEEEEcCC----Cc
Confidence 44788999999999998 89999999997 44444444544432211 24899999999999999999954 45
Q ss_pred eEEEEEEEec
Q psy15734 264 GFIKVYVNLV 273 (314)
Q Consensus 264 ~~~~l~V~~~ 273 (314)
.++.|.|..+
T Consensus 90 ~~~~l~V~~p 99 (102)
T 2eo1_A 90 LSFRLQVAGQ 99 (102)
T ss_dssp CCEEEEEESC
T ss_pred EEEEEEEeCC
Confidence 5677777654
No 489
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.31 E-value=1.3e-11 Score=96.38 Aligned_cols=123 Identities=16% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC-ee---eec-------------CCceeeeEeeCCeeeEEEEEEee
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-DM---IIT-------------GDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~~---~~~-------------~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
+....+.+|+++.|.|.+.+.| .+.+.|++.+. .. +.. ..++.+..... ....+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I~~ 84 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTS--KSQVFLKMNS 84 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETT--TTEEEEEESS
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCC--CceEEEEECC
Confidence 4456789999999999999875 57899998531 11 110 11222221111 1235899999
Q ss_pred cCCCCCeEEEEEEeeCCCC---ceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 243 ILSHQFGSYRCVAVNALGE---TDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
++.+|+|.|.|.+.|..+. ....+.|.|...+ .+.+.+.. +..++...+.|.+.++ |.| .+.|.
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 159 (215)
T 1c5d_H 85 LQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWN 159 (215)
T ss_dssp CCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEG
T ss_pred CCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEc
Confidence 9999999999999987532 2234567776321 23333221 1234455799999997 666 88884
No 490
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.31 E-value=1.6e-11 Score=85.93 Aligned_cols=83 Identities=12% Similarity=0.054 Sum_probs=60.1
Q ss_pred cCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeC------CceeEEEEEeeecCCCCeEEEEEEec
Q psy15734 35 VGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFN------DHRSWFLHLRDVQETDRGWYMCQINT 108 (314)
Q Consensus 35 ~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~~~~ 108 (314)
.+..+.|.|.+.|.|.+.++|++++ ..+ ..+.++..... ....+.|.|.+++..|+|.|+|.|.|
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG-~~l--------~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N 84 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNG-SVL--------NETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 84 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETT-EEC--------CCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECC-EEC--------CCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEE
Confidence 5678999999999999999999954 432 22333322211 11345899999999999999999987
Q ss_pred C-CCcceeEEEEEEeCCce
Q psy15734 109 V-PMTSQKGYLQVVVPPRI 126 (314)
Q Consensus 109 ~-~~~~~~~~l~v~~~p~~ 126 (314)
. |.....+.|.|...|.-
T Consensus 85 ~~G~~~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 85 PFGQASASIMAAFMDNPFE 103 (126)
T ss_dssp TTEEEEEEEEECCCSCTTS
T ss_pred CCCeEEEEEEEEEEcCCCC
Confidence 6 55566677777776643
No 491
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.31 E-value=5.4e-12 Score=97.59 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=43.9
Q ss_pred eecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeC
Q psy15734 187 AFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNA 258 (314)
Q Consensus 187 v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 258 (314)
+.+|+++.|.|.+ |.+.+.|++++.. +... ...++ +|.|.+++.+|+|.|+|.+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~-l~~~------~~~~~-----~L~i~~v~~~DsG~Y~C~~~~~ 71 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKM-IGFL------TEDKK-----KWNLGSNAKDPRGMYQCKGSQN 71 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEE-EEEE------ESSCC-----CEEEEEGGGCCEEEEEEESSSS
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEE-CCCC------CCCCC-----eEEeCCCCcCCCEEEEEEecCC
Confidence 4689999999998 8899999997433 3211 01122 8999999999999999997664
No 492
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.31 E-value=1.1e-11 Score=98.67 Aligned_cols=130 Identities=18% Similarity=0.290 Sum_probs=82.9
Q ss_pred CeEEcCCCcceeecCccEEEEEEEeec--CCceeEEecCCC-e---eee--------------cCCceeeeEeeCCeeeE
Q psy15734 176 PMLTIPNQLEGAFVSQTVELHCHTEAF--PASLNYWTNEKG-D---MII--------------TGDDYEDSRLINGYSCH 235 (314)
Q Consensus 176 p~~~~~~~~~~v~~g~~~~l~C~~~g~--p~p~~~W~~~~~-~---~~~--------------~~~~~~~~~~~~~~~~~ 235 (314)
+.+...+....+.+|++++|.|.+.+. +.+.+.|++.+. . .+. ...++.+..... ...
T Consensus 2 ~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~ 79 (242)
T 1hxm_B 2 GHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPE--TST 79 (242)
T ss_dssp CEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETT--TTE
T ss_pred CccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCC--CcE
Confidence 345667778889999999999999886 678999998531 1 111 112222221111 124
Q ss_pred EEEEEeecCCCCCeEEEEEEeeCCC-C------ceeEEEEEEEecC-------CCeeEEEE---ccccccEeEEEEEeec
Q psy15734 236 MTLKIRSILSHQFGSYRCVAVNALG-E------TDGFIKVYVNLVD-------GDIFQIRK---MSRLHMGAYLCIASNG 298 (314)
Q Consensus 236 s~L~i~~~~~~d~G~Y~C~a~n~~g-~------~~~~~~l~V~~~~-------~~~~~~~~---~~~~~~g~~~C~a~~~ 298 (314)
.+|.|.+++.+|+|.|.|.+.+... . ....+.|.|...+ .+.+.... +..++...+.|.+.++
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~ 159 (242)
T 1hxm_B 80 STLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKF 159 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeE
Confidence 5899999999999999999998641 1 1234567777532 22222111 1124456799999987
Q ss_pred cC--CCccceE
Q psy15734 299 VV--PSVSHRI 307 (314)
Q Consensus 299 ~~--~~~~w~v 307 (314)
.+ +.+.|..
T Consensus 160 ~P~~~~v~W~~ 170 (242)
T 1hxm_B 160 FPDVIKIHWEE 170 (242)
T ss_dssp SSCCEEEEEEE
T ss_pred ECCCeEEEEEc
Confidence 43 5788863
No 493
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.31 E-value=2.5e-11 Score=97.31 Aligned_cols=123 Identities=17% Similarity=0.120 Sum_probs=80.4
Q ss_pred CcceeecCccEEEEEEEeecC--CceeEEecCC-Cee--ee---------------cCCceeeeEeeCCeeeEEEEEEee
Q psy15734 183 QLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDM--II---------------TGDDYEDSRLINGYSCHMTLKIRS 242 (314)
Q Consensus 183 ~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~--~~---------------~~~~~~~~~~~~~~~~~s~L~i~~ 242 (314)
....+.+|++++|.|.+.+.| .+.+.|++.. +.. .+ ...++.+..... ....+|.|.+
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~L~I~~ 87 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKS--SSTAYLELRS 87 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGG--GTEEEEEECS
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecC--CCEEEEEECC
Confidence 345689999999999999876 7899998732 111 11 012232222111 1234799999
Q ss_pred cCCCCCeEEEEEEeeC----CCCceeEEEEEEEecC--------------CCeeEE----EEccccccEeEEEEEeeccC
Q psy15734 243 ILSHQFGSYRCVAVNA----LGETDGFIKVYVNLVD--------------GDIFQI----RKMSRLHMGAYLCIASNGVV 300 (314)
Q Consensus 243 ~~~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~~--------------~~~~~~----~~~~~~~~g~~~C~a~~~~~ 300 (314)
++.+|+|.|.|.+.|. .+.......|.|...+ .+.+.. ..+..++...+.|.+.+.+.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 167 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIG 167 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCT
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCC
Confidence 9999999999999997 2323445567676421 222222 23445666779999999988
Q ss_pred CCccceE
Q psy15734 301 PSVSHRI 307 (314)
Q Consensus 301 ~~~~w~v 307 (314)
+.+.|.-
T Consensus 168 ~~v~W~k 174 (256)
T 3umt_A 168 SNLNWLQ 174 (256)
T ss_dssp TCEEEEE
T ss_pred cEEEEEE
Confidence 8999954
No 494
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.31 E-value=1.6e-11 Score=98.24 Aligned_cols=127 Identities=15% Similarity=0.055 Sum_probs=83.0
Q ss_pred EcCCCcceeecCccEEEEEEEeecC--CceeEEecCC-Ceee--e---------------cCCceeeeEeeCCeeeEEEE
Q psy15734 179 TIPNQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEK-GDMI--I---------------TGDDYEDSRLINGYSCHMTL 238 (314)
Q Consensus 179 ~~~~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~-~~~~--~---------------~~~~~~~~~~~~~~~~~s~L 238 (314)
...+....+.+|++++|.|.+.+.+ .+.+.|++.. +..+ . ...++.+...... ...+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~L 82 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSS--NTAYL 82 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTT--TEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCC--CeEEE
Confidence 3455667899999999999999854 7899999832 2111 1 0122332221111 23479
Q ss_pred EEeecCCCCCeEEEEEEeeCCCCc-eeEEEEEEEec-------------CCCeeEE----EEccccccEeEEEEEeeccC
Q psy15734 239 KIRSILSHQFGSYRCVAVNALGET-DGFIKVYVNLV-------------DGDIFQI----RKMSRLHMGAYLCIASNGVV 300 (314)
Q Consensus 239 ~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~-------------~~~~~~~----~~~~~~~~g~~~C~a~~~~~ 300 (314)
.|.+++.+|+|.|+|.|.|..+.. .....|.|... +.+.+.. ..+..++...+.|.+.+.+.
T Consensus 83 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~ 162 (253)
T 3uzq_A 83 HLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVD 162 (253)
T ss_dssp EECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCE
T ss_pred EeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccc
Confidence 999999999999999999966544 34556666642 1222222 23445666779999999887
Q ss_pred C----CccceE
Q psy15734 301 P----SVSHRI 307 (314)
Q Consensus 301 ~----~~~w~v 307 (314)
+ .+.|.-
T Consensus 163 ~~~~~~v~W~r 173 (253)
T 3uzq_A 163 RYGNSFMHWYQ 173 (253)
T ss_dssp ETTEECEEEEE
T ss_pred cCCCcEEEEEE
Confidence 6 899964
No 495
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.30 E-value=2.5e-11 Score=97.58 Aligned_cols=123 Identities=11% Similarity=0.105 Sum_probs=77.8
Q ss_pred CCcceeecCccEEEEEEEeecC--CceeEEecCCC-e-e--ee--c------------CCceeeeEeeCCeeeEEEEEEe
Q psy15734 182 NQLEGAFVSQTVELHCHTEAFP--ASLNYWTNEKG-D-M--II--T------------GDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 182 ~~~~~v~~g~~~~l~C~~~g~p--~p~~~W~~~~~-~-~--~~--~------------~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
+....+.+|++++|.|.+.+.| .+.+.|++.+. . . +. . ..++.+..... .....|.|.
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I~ 90 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKS--SSTVYIQLS 90 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGG--GTEEEEEEC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCC--CCEEEEEEc
Confidence 4566799999999999999887 68999998642 1 1 11 0 12222222110 123489999
Q ss_pred ecCCCCCeEEEEEEeeCCCC---ceeEEEEEEEecC--CCeeEEEE----ccccccEeEEEEEeec-cCC-Cccce
Q psy15734 242 SILSHQFGSYRCVAVNALGE---TDGFIKVYVNLVD--GDIFQIRK----MSRLHMGAYLCIASNG-VVP-SVSHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~--~~~~~~~~----~~~~~~g~~~C~a~~~-~~~-~~~w~ 306 (314)
+++.+|+|.|.|.+.|..+. ....+.|.|...+ .+.+.+.. +..++...+.|.+.++ |.| .+.|.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~ 166 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWN 166 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEG
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEe
Confidence 99999999999999996431 1133467776421 23333221 2234455799999986 555 78884
No 496
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.30 E-value=1.2e-11 Score=81.49 Aligned_cols=88 Identities=16% Similarity=0.225 Sum_probs=62.9
Q ss_pred ceeecCccEEEEEEEee-cCCceeEEecCCCeeeec---CCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 185 EGAFVSQTVELHCHTEA-FPASLNYWTNEKGDMIIT---GDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 185 ~~v~~g~~~~l~C~~~g-~p~p~~~W~~~~~~~~~~---~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
..+..|+++.|.|.+.+ .|.|.+.|.|.++..... .........+.+......|.|.++..+|+|.|+|.|.|..|
T Consensus 24 ~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g 103 (122)
T 1xau_A 24 HSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQ 103 (122)
T ss_dssp EEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTE
T ss_pred EEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCC
Confidence 46889999999999976 689999999976533222 11212222233333456999999999999999999999888
Q ss_pred Cc-eeEEEEEEEe
Q psy15734 261 ET-DGFIKVYVNL 272 (314)
Q Consensus 261 ~~-~~~~~l~V~~ 272 (314)
.. +.++.|.|..
T Consensus 104 ~ieSHs~ti~V~~ 116 (122)
T 1xau_A 104 VINSHSVTIHVRE 116 (122)
T ss_dssp EEECCCEEEEEC-
T ss_pred ceeeeEEEEEEEe
Confidence 65 4555666654
No 497
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=82.05 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=61.6
Q ss_pred CCceecCCcceEEEcCCcEEEEEEecCCCceEEEEEEcCceeEEEeeeeeeecCcCEEEEeCCceeEEEEEeeecCCCCe
Q psy15734 21 MPRFAEPVANVTATVGKEALMACVVENLREYKVAWVKMITQTILSIHHKVVTQNKRVSITFNDHRSWFLHLRDVQETDRG 100 (314)
Q Consensus 21 ~p~~~~~~~~~~v~~g~~~~l~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 100 (314)
++.|...|....+.+|+++.|.|.+.+.|.+.+.|++++ ..+ .... ...|.|.+++.+|+|
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~-~~~--------~~~~----------~~~L~i~~v~~~d~G 63 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE-LPL--------THET----------KKLYMVPYVDLEHQG 63 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETT-EEC--------TTCC----------SSEEEESSCCGGGCE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCC-eeC--------CcCC----------CCeEEECCCCHHhCE
Confidence 567778888899999999999999999898999999954 321 1111 127999999999999
Q ss_pred EEEEEEecCCCcc--eeEEEEE
Q psy15734 101 WYMCQINTVPMTS--QKGYLQV 120 (314)
Q Consensus 101 ~Y~C~~~~~~~~~--~~~~l~v 120 (314)
.|+|.+.|..... ..+.|.|
T Consensus 64 ~Y~C~a~n~~g~~~s~~~~l~V 85 (91)
T 3bfo_A 64 TYWCHVYNDRDSQDSKKVEIII 85 (91)
T ss_dssp EEEEEEECSSCEEECCCEEEEE
T ss_pred EEEEEEEcCCCCEEeeeEEEEE
Confidence 9999998763332 3344554
No 498
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.30 E-value=2.7e-11 Score=94.40 Aligned_cols=122 Identities=14% Similarity=0.108 Sum_probs=75.6
Q ss_pred CCCcceeecCccEEEEEEEeec--CCceeEEecCCC-e--eee--------------cCCceeeeEeeCCeeeEEEEEEe
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAF--PASLNYWTNEKG-D--MII--------------TGDDYEDSRLINGYSCHMTLKIR 241 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~--p~p~~~W~~~~~-~--~~~--------------~~~~~~~~~~~~~~~~~s~L~i~ 241 (314)
.+....+.+|++++|.|.+.+. +.+.+.|++.+. . ..+ ...++.+.. .+ ....|.|.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~--~~~~L~I~ 80 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK--TS--TTVDLKIT 80 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE--CS--SEEEEEES
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe--eC--CEEEEEEC
Confidence 3455678999999999999874 467899987421 1 111 112222222 11 23479999
Q ss_pred ecCCCCCeEEEEEEeeCCCC----ceeEEEEEEEec--CCCeeEE-EEc---cccccEeEEEEEeeccCCCc--cce
Q psy15734 242 SILSHQFGSYRCVAVNALGE----TDGFIKVYVNLV--DGDIFQI-RKM---SRLHMGAYLCIASNGVVPSV--SHR 306 (314)
Q Consensus 242 ~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~--~~~~~~~-~~~---~~~~~g~~~C~a~~~~~~~~--~w~ 306 (314)
+++.+|+|.|.|.+.|..+. ......|.|... ..+.+.+ ... ..++...+.|.+.+++++.+ .|.
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~ 157 (215)
T 3nl4_H 81 SPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWN 157 (215)
T ss_dssp SCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEG
T ss_pred CCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEe
Confidence 99999999999999998653 233445666522 2233332 111 22344569999999876554 484
No 499
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.29 E-value=1.8e-12 Score=101.63 Aligned_cols=120 Identities=13% Similarity=0.152 Sum_probs=79.6
Q ss_pred cceeecCccEEEEEEEeecCC-----ceeEEecCCCeeeec------------CCceeeeEeeCC-eeeEEEEEEeecCC
Q psy15734 184 LEGAFVSQTVELHCHTEAFPA-----SLNYWTNEKGDMIIT------------GDDYEDSRLING-YSCHMTLKIRSILS 245 (314)
Q Consensus 184 ~~~v~~g~~~~l~C~~~g~p~-----p~~~W~~~~~~~~~~------------~~~~~~~~~~~~-~~~~s~L~i~~~~~ 245 (314)
.+.+.+|+++.|.|.+.+.|. +.+.|++++...... ..+..+ ..+. .....+|.|.+++.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTAL--FPDLLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEEC--CTTTGGGTBCCEEECSCCG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEE--ecccccCCeEEEEECCccc
Confidence 456889999999999998865 789999976443110 111111 1100 00123899999999
Q ss_pred CCCeEEEEEEeeCCCCceeEEEEEEEecCCCe-eEEE---EccccccEeEEEEE-eeccCCCccce
Q psy15734 246 HQFGSYRCVAVNALGETDGFIKVYVNLVDGDI-FQIR---KMSRLHMGAYLCIA-SNGVVPSVSHR 306 (314)
Q Consensus 246 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~-~~~~---~~~~~~~g~~~C~a-~~~~~~~~~w~ 306 (314)
+|+|.|+|.+.|. +.....+.|.|...+..+ +... .+..++...+.|.+ .+.|.|.+.|.
T Consensus 82 ~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~ 146 (222)
T 4i0k_A 82 TDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWK 146 (222)
T ss_dssp GGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEE
T ss_pred ccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEE
Confidence 9999999999986 455667777776654333 3222 22334555799999 78888999995
No 500
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.29 E-value=2.6e-12 Score=112.64 Aligned_cols=86 Identities=21% Similarity=0.308 Sum_probs=67.8
Q ss_pred CCCcceeecCccEEEEEEEeecCCceeEEecCCCeeeecCCceeeeEeeCCeeeEEEEEEeecCCCCCeEEEEEEeeCCC
Q psy15734 181 PNQLEGAFVSQTVELHCHTEAFPASLNYWTNEKGDMIITGDDYEDSRLINGYSCHMTLKIRSILSHQFGSYRCVAVNALG 260 (314)
Q Consensus 181 ~~~~~~v~~g~~~~l~C~~~g~p~p~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~g 260 (314)
.+....+.+|+++.|.|.+.|.|.|.+.|+++++.........+.....++ +|.|.+++.+|+|.|+|.|.|..|
T Consensus 391 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~-----~L~i~~v~~~d~G~Y~C~a~N~~g 465 (477)
T 2id5_A 391 KAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG-----TLEVRYAQVQDNGTYLCIAANAGG 465 (477)
T ss_dssp SCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTS-----CEEESSCCSTTCEEEEEEEEETTE
T ss_pred ccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCC-----EEEEeeCChHHCEEEEEEEEeCCC
Confidence 456778999999999999999999999999986554432222223333445 899999999999999999999999
Q ss_pred CceeEEEEEEE
Q psy15734 261 ETDGFIKVYVN 271 (314)
Q Consensus 261 ~~~~~~~l~V~ 271 (314)
.....+.|.|.
T Consensus 466 ~~~~~~~l~V~ 476 (477)
T 2id5_A 466 NDSMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEEEE
T ss_pred cEEEEEEEEEe
Confidence 99888888875
Done!