BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy15735
(574 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 291 bits (746), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/153 (92%), Positives = 145/153 (94%), Gaps = 3/153 (1%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG MP QA P +D PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGAMP---QAAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 57
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTV+VIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 58 EFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 117
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 118 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 150
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/148 (85%), Positives = 139/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLINPNM+VLGQEPRQTTSNLGHLQK SVQALIHGLNRHYYSISINYRKNEL
Sbjct: 151 GKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNEL 210
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+W DGL+L DYNEHC +NE TV +ML+LAK+YNK+LE+EEKM+PEQLAI
Sbjct: 211 EQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAI 270
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEEKVD +M NI+QCL
Sbjct: 271 KNVGKQDPKRHLEEKVDKVMQNNIVQCL 298
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVG 339
W G+ ++ +++E VA ++D LAK+YNK+LE+EEKM+PEQLAIKNVG
Sbjct: 222 SWKDGLTLSDYNEHCSINEDTVAEMLD-------LAKNYNKSLEDEEKMTPEQLAIKNVG 274
Query: 340 KQDPKRHLEEKVDTLMTANIIQCLGGKL 367
KQDPKRHLEEKVD +M NI+QCLG L
Sbjct: 275 KQDPKRHLEEKVDKVMQNNIVQCLGAML 302
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/133 (96%), Positives = 131/133 (98%)
Query: 180 SDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTG 239
+D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRVIDVFAMPQ+G
Sbjct: 20 TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 240 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 299
TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 300 AVAVVVDPIQSVK 312
AVAVVVDPIQSVK
Sbjct: 140 AVAVVVDPIQSVK 152
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVG 339
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVG
Sbjct: 224 SWMEGL---TLQDYSEHCKHNESVV----KEMLELAKNYNKAVEEEDKMTPEQLAIKNVG 276
Query: 340 KQDPKRHLEEKVDTLMTANIIQCLGGKL 367
KQDPKRHLEE VD LMT+NI+QCL L
Sbjct: 277 KQDPKRHLEEHVDVLMTSNIVQCLAAML 304
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 128/133 (96%), Positives = 131/133 (98%)
Query: 180 SDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTG 239
+D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRVIDVFAMPQ+G
Sbjct: 20 TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 240 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 299
TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 139
Query: 300 AVAVVVDPIQSVK 312
AVAVVVDPIQSVK
Sbjct: 140 AVAVVVDPIQSVK 152
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 7/88 (7%)
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVG 339
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVG
Sbjct: 224 SWMEGL---TLQDYSEHCKHNESVV----KEMLELAKNYNKAVEEEDKMTPEQLAIKNVG 276
Query: 340 KQDPKRHLEEKVDTLMTANIIQCLGGKL 367
KQDPKRHLEE VD LMT+NI+QCL L
Sbjct: 277 KQDPKRHLEEHVDVLMTSNIVQCLAAML 304
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/153 (84%), Positives = 137/153 (89%), Gaps = 2/153 (1%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
MERL R+ GL A P D P +DT+EQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MERLQRIFGAGGGLGHASP--DSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 58
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVDEYTVRV+DVFAMPQ+GTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 59 EFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFG 118
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEAL++RAVAVVVDPIQSVK
Sbjct: 119 CWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK 151
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 126/148 (85%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR INP ++LGQEPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 152 GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNEL 211
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+KMLLNLHKK W DGL+L+ ++ H K NE TV +ML LA YNKA++EE+++SPE+LAI
Sbjct: 212 EEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAI 271
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
NVG+QD K+HLEE V LM++NI+Q L
Sbjct: 272 VNVGRQDAKKHLEEHVSNLMSSNIVQTL 299
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 7/87 (8%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W G+ + + +E+ V Q + LA YNKA++EE+++SPE+LAI NVG+
Sbjct: 224 WTDGLTLRRFDTHSKTNEQTV-------QEMLSLAAKYNKAVQEEDELSPEKLAIVNVGR 276
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QD K+HLEE V LM++NI+Q LG L
Sbjct: 277 QDAKKHLEEHVSNLMSSNIVQTLGTML 303
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/132 (93%), Positives = 127/132 (96%)
Query: 181 DGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGT 240
D VDT+E VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV VIDVFAMPQ+GT
Sbjct: 23 DSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGT 82
Query: 241 GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA 300
GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS+RA
Sbjct: 83 GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRA 142
Query: 301 VAVVVDPIQSVK 312
VAVVVDPIQSVK
Sbjct: 143 VAVVVDPIQSVK 154
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 120/148 (81%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR INP M L QEPRQTTSNLGHLQK S+QALIHGLNRHYYSI I YR ++L
Sbjct: 155 GKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDL 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNL+K +WMD +S+++Y++ + N+ + ML+LAK+Y KALE+E+ M+ ++LAI
Sbjct: 215 EQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAI 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGK DPKRH+ ++V ++ NI+Q L
Sbjct: 275 KNVGKMDPKRHIADEVSKMLNDNIVQSL 302
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 308 IQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLGG 365
++++ +LAK+Y KALE+E+ M+ ++LAIKNVGK DPKRH+ ++V ++ NI+Q L G
Sbjct: 247 LKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAG 304
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 135/157 (85%), Gaps = 11/157 (7%)
Query: 159 NMERLL---RLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMG 215
+++RLL R+G+GM G D P+VD +E VYISSLALLKML+HGR G PMEVMG
Sbjct: 3 SLQRLLQGARMGTGMMG--------DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMG 54
Query: 216 LMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSH 275
LMLGEFVD++TVRV+DVFAMPQ+GTGVSVEAVDPVFQ M+DMLKQTGRPEMVVGWYHSH
Sbjct: 55 LMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSH 114
Query: 276 PGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
PGFGCWLS VDINTQQSFE L+ RAVAVVVDPIQSVK
Sbjct: 115 PGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVK 151
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 115/156 (73%), Gaps = 8/156 (5%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLINP+ +++GQEPRQTTSNLGH+ K S+QALIHGL RHYYS+ INY+K EL
Sbjct: 152 GKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTEL 211
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+ MLLNLHK+ W GL L+++N + N +++ M L++ Y + ++ E +SPEQL I
Sbjct: 212 EEIMLLNLHKQPWAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRI 271
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCLDRNMERLL 164
+ VGKQDPK+HL+ A + +C+D N+ +L
Sbjct: 272 QYVGKQDPKKHLD--------AEVQKCIDNNISSML 299
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 260 KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYN 319
K+T E+++ H P W G+ + ++F + +E+ A I +K L++ Y
Sbjct: 207 KKTELEEIMLLNLHKQP----WAHGLLL---ENFNSAAEKNHA----SIDKMKSLSEQYT 255
Query: 320 KALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ ++ E +SPEQL I+ VGKQDPK+HL+ +V + NI L
Sbjct: 256 ERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLA 300
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/153 (76%), Positives = 129/153 (84%), Gaps = 5/153 (3%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
MERL RL ++ +D DT E VYISS+ALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MERLQRLM-----MNTKVGAADANKDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLG 55
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVDEYTV V+DVFAMPQ+GTGVSVEAVD VFQA+M+DMLKQTGR +MVVGWYHSHPGFG
Sbjct: 56 EFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFG 115
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD+NTQ+SFE L+ RAVAVVVDPIQSVK
Sbjct: 116 CWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVK 148
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 102/148 (68%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI+ ++ QEPRQTTSN G + K ++QALIHGLNRHYYS++I+Y K
Sbjct: 149 GKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQALIHGLNRHYYSLNIDYHKTPA 208
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E KMLLNLHK+ W GL +QDY E N M+ +A+ Y+K +EEE+++S E+L
Sbjct: 209 ETKMLLNLHKEQWQSGLKMQDYQEKETENLEATKRMVAVAQQYSKRIEEEKELSEEELKT 268
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+ VGKQDPK+HL + + + N + L
Sbjct: 269 RYVGKQDPKKHLAKTAENTLEENTVSVL 296
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W SG+ + Q E + A +V +A+ Y+K +EEE+++S E+L + VGK
Sbjct: 221 WQSGLKMQDYQEKETENLEATKRMV-------AVAQQYSKRIEEEKELSEEELKTRYVGK 273
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
QDPK+HL + + + N + L
Sbjct: 274 QDPKKHLAKTAENTLEENTVSVL 296
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 242 bits (617), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/153 (76%), Positives = 129/153 (84%), Gaps = 5/153 (3%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
MERL RL ++ +D DT E VYISS+ALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MERLQRLM-----MNSKVGSADTGRDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLG 55
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTV V+DVFAMPQ+GTGVSVEAVD VFQAKM+DMLKQTGR +MVVGWYHSHPGFG
Sbjct: 56 EFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFG 115
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD+NTQ+SFE L+ RAVAVVVDPIQSVK
Sbjct: 116 CWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVK 148
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 103/148 (69%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI+ ++ EPRQTTSN G L K ++QALIHGLNRHYYS++I+Y K
Sbjct: 149 GKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAK 208
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E KML+NLHK+ W GL + DY E + N M+++A+ Y+K +EEE++++ E+L
Sbjct: 209 ETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKT 268
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+ VG+QDPK+HL E D + NI+ L
Sbjct: 269 RYVGRQDPKKHLSETADETLENNIVSVL 296
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W SG+ + +E E +A +S+ ++A+ Y+K +EEE++++ E+L + VG+
Sbjct: 221 WQSGLKM---YDYEEKEESNLAAT----KSMVKIAEQYSKRIEEEKELTEEELKTRYVGR 273
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
QDPK+HL E D + NI+ L
Sbjct: 274 QDPKKHLSETADETLENNIVSVL 296
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 128/153 (83%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RL RL ++ P+ DT E VYISSLALLKMLKH RAGVPMEVMGLMLG
Sbjct: 1 MDRLQRLMMSQRSNMIGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLG 60
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
+FVDEYTV V+DVFAMPQ+GTGVSVEAVD VFQAKM+DMLKQTGR +MVVGWYHSHPGFG
Sbjct: 61 DFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFG 120
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD++TQ+SFE L+ RAVAVVVDPIQSVK
Sbjct: 121 CWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVK 153
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 104/148 (70%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI+P +V QEPRQTTSN+G L K ++Q+LIHGLNRHYYS++I+Y K
Sbjct: 154 GKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHGLNRHYYSLNIDYHKTSA 213
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E ML+NLHK+ W GL + DY E ++N + +A+ Y K +EEE++++ ++L
Sbjct: 214 ELNMLMNLHKEQWQSGLKMHDYKEKERINLEATKKSVRIAEQYTKRIEEEKELTEDELKT 273
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+ VGKQDPK+HL E + ++ NI+ L
Sbjct: 274 RYVGKQDPKKHLSETAERVLEENIVSVL 301
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W SG+ ++ + E ++ A +SV+ +A+ Y K +EEE++++ ++L + VGK
Sbjct: 226 WQSGLKMHDYKEKERINLEATK------KSVR-IAEQYTKRIEEEKELTEDELKTRYVGK 278
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
QDPK+HL E + ++ NI+ L
Sbjct: 279 QDPKKHLSETAERVLEENIVSVL 301
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 143/187 (76%), Gaps = 6/187 (3%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDG-PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLML 218
M R L G GL + ++D P+ DTAE ++ISSLALLKML+H RAGVP+EVMGLML
Sbjct: 1 MNRSLMSLLGREGLGEK--ITDATPLPDTAETIHISSLALLKMLQHARAGVPLEVMGLML 58
Query: 219 GEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF 278
GE +DEYT+RVIDVFAMPQ+GT VSVEA+DPVFQ KMLDMLKQTGR E+V+GWYHSHPGF
Sbjct: 59 GELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGF 118
Query: 279 GCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-ELAKHYNKALEEEEKMSPEQLAIKN 337
GCWLS VD+NTQQSFE L RAVAVVVDP+QSV+ ++ + ++ P Q+ N
Sbjct: 119 GCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPTAEPRQIT-SN 177
Query: 338 VGK-QDP 343
+G QDP
Sbjct: 178 LGHLQDP 184
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/148 (58%), Positives = 110/148 (74%), Gaps = 3/148 (2%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR I + EPRQ TSNLGHLQ S+QALIHGLNR+YYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRTIKTSPTA---EPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNEL 209
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK W +GL + ++ H + NE +N++LEL K Y K++++E+K+ PE+ +
Sbjct: 210 EQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEV 269
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
VGK DPKRHL V TLM N+++ L
Sbjct: 270 SAVGKLDPKRHLISDVHTLMANNVVRVL 297
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W G+ ++ + E +E+ I ++ EL K Y K++++E+K+ PE+ + VGK
Sbjct: 222 WTEGLIVDKFDTHEQSNEKQ-------INNLLELTKQYQKSIQDEDKIEPEKKEVSAVGK 274
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
DPKRHL V TLM N+++ L
Sbjct: 275 LDPKRHLISDVHTLMANNVVRVL 297
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/135 (76%), Positives = 117/135 (86%)
Query: 178 PVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQ 237
P P D +E V ISSLALLKMLKHGRAG+P+EVMGLMLGEFVDEYTV+V+DVFAMPQ
Sbjct: 8 PDDGEPTSDASETVQISSLALLKMLKHGRAGIPLEVMGLMLGEFVDEYTVKVVDVFAMPQ 67
Query: 238 TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 297
+GT V+VE+VDP+FQ +M+ +LK TGR E VVGWYHSHPGFGCWLS VDI+TQQSFE L
Sbjct: 68 SGTNVTVESVDPIFQMEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLC 127
Query: 298 ERAVAVVVDPIQSVK 312
+RAVAVVVDPIQSVK
Sbjct: 128 KRAVAVVVDPIQSVK 142
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI+ + VLG EPRQ TSN+G+L+ ++ ++IHGLN+HYYS +I RKN+
Sbjct: 143 GKVVIDAFRLIDNQLGVLGGEPRQVTSNIGYLKTPTLISIIHGLNKHYYSFNITCRKNDF 202
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLH+KTW D L L D + + L+L + Y KA EEE+ ++ + +
Sbjct: 203 EQKMLLNLHRKTWADNLKLGDVRSKRE-------EALKLIESYGKAFEEEKNLAGKNPDM 255
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCLDRNMERLL 164
VG+ D +R L EK + + N I L ++ R +
Sbjct: 256 AKVGRIDYRRRLLEKCEESIMENTIYSLLYSIHRYI 291
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 123/153 (80%), Gaps = 3/153 (1%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RL+R M QA D P DT+E V ISSLALLKML+H R+G+P+EVMGLMLG
Sbjct: 1 MDRLIR-SLLMNQNKQATDKLDHP--DTSETVNISSLALLKMLRHARSGIPLEVMGLMLG 57
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
+FVD+YT+ V DVFAMPQ+GT V+VE+VDPV+Q K +D+LK GR E VVGWYHSHPGFG
Sbjct: 58 DFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFG 117
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD+NTQQSFEAL RAVAVVVDPIQSVK
Sbjct: 118 CWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVK 150
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 11/159 (6%)
Query: 9 GKVVIDAFRLINP-NMMVL----GQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINY 63
GKV++DAFR +NP N+ + EPRQTTSNLGHL K S+ +++HGL YYS+++ Y
Sbjct: 151 GKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAY 210
Query: 64 RKNELEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEE------ 117
R EQKML+ L+KK+W D L++ Y+E K E + +L +NK ++E
Sbjct: 211 RMGSNEQKMLMCLNKKSWYDQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEKPI 270
Query: 118 EEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+K Q +K GK + K+ L+ +L+ ++ L
Sbjct: 271 ADKKGKTQEEVKKFGKINAKQQLQMITSSLLNDSLCHQL 309
>sp|Q12893|TM115_HUMAN Transmembrane protein 115 OS=Homo sapiens GN=TMEM115 PE=1 SV=1
Length = 351
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 147/227 (64%), Gaps = 5/227 (2%)
Query: 347 LEEKVDTLMTANIIQCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNT 406
+E+ V + + + G+L+EPLWG++E++ FF++VN+ V + Y YM +FN
Sbjct: 68 MEQHVWDVAISLTTVVVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNL 127
Query: 407 DLLFFVRIHGLTGYISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGL 466
LF VRIHG G++ GVLVA+KQ M D V+L + ++ +P+L++ + +L L L
Sbjct: 128 VYLFTVRIHGALGFLGGVLVALKQTMGDCVVLR--VPQVRVSVMPMLLLALLLLLRLATL 185
Query: 467 VDSIRPTMTLFGTLVSWIYLRFYQYHTNGTRGDMADNFNFANFFPTIIQPPIAVVCNTIH 526
+ S FG L SW+YLRFYQ H+ G RGDMAD+F FA FFP I+QP + ++ N +H
Sbjct: 186 LQSPALASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVH 244
Query: 527 EFLVRIGLCRKMVRKFDMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
LV++ +C+K V+++D+ APSS ITI+LPG DP DAERR + K
Sbjct: 245 SLLVKVKICQKTVKRYDVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>sp|A4FUB8|TM115_BOVIN Transmembrane protein 115 OS=Bos taurus GN=TMEM115 PE=2 SV=1
Length = 351
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 141/211 (66%), Gaps = 5/211 (2%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + Y YM +FN LF VRIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L + ++ +P+L++ + +L L L+ S FG + S
Sbjct: 144 GVLVALKQTMGDCVVLR--VPQVRVSVVPMLLLGLLLLLRLATLLQSPALASYGFGLISS 201
Query: 483 WIYLRFYQYHTNGTRGDMADNFNFANFFPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD+F FA FFP I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>sp|Q9WUH1|TM115_MOUSE Transmembrane protein 115 OS=Mus musculus GN=Tmem115 PE=1 SV=1
Length = 350
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 142/211 (67%), Gaps = 5/211 (2%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + L Y YM +FN LF +RIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTYMASFNLVYLFTIRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L + ++ +P+L++ + +L L L+ S FG L S
Sbjct: 144 GVLVALKQTMGDCVVLR--VPQVRVSVVPMLLLALLLLLRLATLLQSPALASYGFGLLSS 201
Query: 483 WIYLRFYQYHTNGTRGDMADNFNFANFFPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD+F FA FFP I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF-VDEYTVRVIDVFAMPQTGTGVSVEAV 247
++V IS++AL+KM+ H R+G E+MGLM G+ V+ T+ V+D FA+P GT V A
Sbjct: 59 QKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQ 118
Query: 248 DPVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 305
+ ++ + LD K+ GR E VVGWYHSHPG+GCWLSG+D+NTQ++ + + VA+V+
Sbjct: 119 NEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVI 178
Query: 306 DPIQSV 311
DP +++
Sbjct: 179 DPNRTI 184
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 86/125 (68%), Gaps = 3/125 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ + IS+LALLKM+ H R+G +EVMGLMLG+ V++ T+ V+D FA+P GT V A
Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQA 108
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ ++ K+ GR E VGWYHSHPG+GCWLSG+D++TQ + E VA+VVD
Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVD 168
Query: 307 PIQSV 311
P+++V
Sbjct: 169 PVRTV 173
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQ-TTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNE 67
GKV + AFR +EP + T L ++ V + YY + I+Y K+
Sbjct: 176 GKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHC------KQYYPLEISYFKSA 229
Query: 68 LEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDM---LELAKHY-NKALEEEEKMSP 123
L++++L +L K W++ L + + G + D+ LE ++++ + + EK S
Sbjct: 230 LDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGRGTDVNEKRSE 289
Query: 124 EQLA 127
++L+
Sbjct: 290 DKLS 293
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 175 QAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFA 234
Q+ P S P + V IS++ALLKM+ H R+G +EVMG+++G+ V+ T+ ++D FA
Sbjct: 40 QSKPWSKDP--HYFKHVKISAIALLKMVMHARSGGKLEVMGMLMGK-VENNTMIIMDSFA 96
Query: 235 MPQTGTGVSVEAVDPVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQS 292
+P GT V A ++ + L+++KQTGR E +GWYHSHPG+GCWLSG+D+ TQ
Sbjct: 97 LPVEGTETRVNAQVEAYEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSV 156
Query: 293 FEALSERAVAVVVDPIQSV 311
+ SE + +V+DP ++V
Sbjct: 157 NQQYSEPWLGIVIDPTRTV 175
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTS-NLGHLQKHSVQALIHGLNRHYYSISINYRKNE 67
GKV I AFR + P + S L ++ V + YYS+ I Y K+
Sbjct: 178 GKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHC------KQYYSLEITYFKSS 231
Query: 68 LEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLE 106
L+Q++L L K W++ LS + G +ND+ E
Sbjct: 232 LDQQLLDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSE 270
>sp|Q9FVU9|CSN5A_ARATH COP9 signalosome complex subunit 5a OS=Arabidopsis thaliana
GN=CSN5A PE=1 SV=1
Length = 358
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D
Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + E +AVV+D
Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175
Query: 307 PIQSV 311
P ++V
Sbjct: 176 PTRTV 180
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 82/121 (67%), Gaps = 3/121 (2%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 AKM--LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 V 311
+
Sbjct: 176 I 176
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 82/121 (67%), Gaps = 3/121 (2%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 AKM--LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 V 311
+
Sbjct: 176 I 176
>sp|Q6BMQ3|CSN5_DEBHA COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRI1 PE=3 SV=2
Length = 469
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 83/124 (66%), Gaps = 3/124 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++ YISSLAL KM H ++G +EVMG+M G+ + + ++ V+DV+ +P GT V A
Sbjct: 61 KKTYISSLALCKMSVHAKSGGAIEVMGMMTGKII-KNSIIVMDVYPLPVEGTETRVNAQA 119
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + L+ KQ GR E +VGWYHSHPG+GCWLSG+D+ TQ + + +A+V+D
Sbjct: 120 EGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVID 179
Query: 307 PIQS 310
P+++
Sbjct: 180 PMKT 183
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 3/121 (2%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
+S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 55 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113
Query: 253 AKM--LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173
Query: 311 V 311
+
Sbjct: 174 I 174
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 3/121 (2%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
+S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 AKM--LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 V 311
+
Sbjct: 176 I 176
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 3/121 (2%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
+S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 55 LSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113
Query: 253 AKM--LDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173
Query: 311 V 311
+
Sbjct: 174 I 174
>sp|Q8LAZ7|CSN5B_ARATH COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana
GN=CSN5B PE=1 SV=2
Length = 357
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 83/125 (66%), Gaps = 3/125 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D FA+P GT V A
Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQS 115
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + K GR E VVGWYHSHPG+GCWLSG+D++TQ + E +AVV+D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 307 PIQSV 311
P ++V
Sbjct: 176 PTRTV 180
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V A
Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112
Query: 249 PVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + +M GR E VVGWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 307 PIQSV 311
P++++
Sbjct: 173 PLRTM 177
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V ISS+A++KM+ H R+G +EVMG+M G +++ T+ + D + +P GT V A D
Sbjct: 44 VRISSVAMIKMVMHARSGGNLEVMGMMQG-YIEGSTMVITDAYRLPVEGTETRVNAQDEA 102
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+ + L + ++ R E V+GWYHSHPG+GCWLSG+D+ TQ + +E VAVV+DP
Sbjct: 103 NEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPD 162
Query: 309 QSVKE 313
++V +
Sbjct: 163 RTVSQ 167
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ V IS+ AL+KM H R+G +EVMGLM G + T V D F +P GT V A D
Sbjct: 50 KHVRISATALIKMTMHARSGGNLEVMGLMQG-YTQGDTFIVTDAFRLPVEGTETRVNAQD 108
Query: 249 PV--FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+ + LD+ + GR E VVGWYHSHPG+GCWLSG+D++T+ + + +AVV+D
Sbjct: 109 EANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVID 168
Query: 307 PIQSV 311
P +++
Sbjct: 169 PDRTI 173
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 85/149 (57%), Gaps = 14/149 (9%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V IS++ALLKM+ H R+G +EVMGLM G ++ T V D F +P GT V A D
Sbjct: 51 VRISAVALLKMVMHARSGGSLEVMGLMQG-YILPNTFVVTDAFRLPVEGTETRVNAQDEA 109
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDP- 307
+ L ++ GR E VGWYHSHPG+GCWLSG+D++T Q + +S VAVV+DP
Sbjct: 110 NEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVST-QDMQQMSGPFVAVVIDPE 168
Query: 308 ---------IQSVKELAKHYNKALEEEEK 327
I + + K Y EE+E+
Sbjct: 169 RTISAGKVDIGAFRTFPKDYTPPKEEQEE 197
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 3/123 (2%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDP- 249
V +SS+AL+KM H R+G +EVMG+M G+ + T V+D + +P GT V A
Sbjct: 56 VLVSSIALVKMAMHARSGGAIEVMGMMTGKILPN-TFVVMDCYPLPVEGTETRVNAQQEG 114
Query: 250 -VFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
F + L LK GR E +VGWYHSHPG+GCWLSG+D++TQ + E +AVVVDP
Sbjct: 115 IEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPN 174
Query: 309 QSV 311
+++
Sbjct: 175 RTI 177
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 81/124 (65%), Gaps = 3/124 (2%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V IS++ALLKML+H G+P+EVMG + G+ V+ ++ ++D FA+P GT V A +
Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEA 93
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+ + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + + VAVV+DP
Sbjct: 94 QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPK 153
Query: 309 QSVK 312
+S++
Sbjct: 154 RSLE 157
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 151 NIIQCLDRNMERLLRLGSGM-PGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGV 209
N I +D + L R LS A P + P + + IS++AL+KM H R+G
Sbjct: 12 NTISLIDPQRDALYRYDEETHKALSAARPWAKDP--HYFKSIRISAVALIKMTMHARSGG 69
Query: 210 PMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV--FQAKMLDMLKQTGRPEM 267
+EVMGLM G + E T V D F +P GT V A + + L + GR E
Sbjct: 70 SLEVMGLMQGYILPE-TFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMEN 128
Query: 268 VVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSV 311
VGWYHSHPG+GCWLSG+D+ T Q + L VAVV+DP +++
Sbjct: 129 AVGWYHSHPGYGCWLSGIDVTT-QDMQQLGGPFVAVVIDPERTI 171
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V IS++AL+KM+ H R+G E+MG+M G+ D T ++DV A+P GT V A +
Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGKVRDG-TFWIMDVAALPVQGTETRVNAGNEA 109
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+ + G+ E++ GWYHSHPG+GCWLSG+D+NTQ + + ++ +AVV+DP
Sbjct: 110 MEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPN 169
Query: 309 QSV 311
++V
Sbjct: 170 RTV 172
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 3/123 (2%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V IS++AL+KM+ H R+G E+MG+M G+ D T ++DV A+P GT V A +
Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGKVRDG-TFWIMDVAALPVQGTETRVNAGNEA 109
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+ + G+ E++ GWYHSHPG+GCWLSG+D+NTQ + + ++ +AVV+DP
Sbjct: 110 MEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPN 169
Query: 309 QSV 311
++V
Sbjct: 170 RTV 172
>sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1
Length = 213
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 85/135 (62%), Gaps = 8/135 (5%)
Query: 185 VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSV 244
V+ + YISSLAL+KM H + G +E+MG+++G+ + +++ V+D + +P GT V
Sbjct: 69 VNYFNKCYISSLALMKMCTHAQTGGSIEIMGMLVGK-ISGHSIIVMDTYRLPVEGTETRV 127
Query: 245 EAVDPVFQAKMLDMLKQTGR------PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
A + + M++ L + + E +VGWYH HP +GCWL G+D++TQ + L +
Sbjct: 128 NAQNEAY-TYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQD 186
Query: 299 RAVAVVVDPIQSVKE 313
+A+VVDP++++K+
Sbjct: 187 PYLAIVVDPVKTLKQ 201
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++ +S+LA +K+L+H G MEV+G++LG DE V V+D + +P GT V A
Sbjct: 71 QKAALSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIV-VVDSYRLPVEGTETRVNAQM 129
Query: 249 PVFQAKMLDMLKQTGRPE--MVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + + +T PE +VGWYHSHPG+GCWLSG+D TQ + + +A+VVD
Sbjct: 130 ESYEYTVQYL--ETAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVD 187
Query: 307 PIQS 310
P +S
Sbjct: 188 PKRS 191
>sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRI1 PE=3 SV=1
Length = 373
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++ IS LA KML H G +EVMG+++G + + V D +++P GT V A
Sbjct: 64 QKCLISRLATTKMLSHAVDGGDIEVMGMLVG-YTSNDMIVVKDCYSLPVQGTETRVNAHM 122
Query: 249 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
++ + + + + +VGWYHSHPG+GCWLS +DI TQ + + +A+VVDP
Sbjct: 123 ESYEYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPK 182
Query: 309 QSV 311
+S+
Sbjct: 183 KSL 185
>sp|B3LH96|CSN5_YEAS1 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=RRI1 PE=3 SV=2
Length = 440
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEA---- 246
V IS L+ K+ + G +E+MG+++G F + + V+D F +P GT V A
Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLES 129
Query: 247 -------VDPVF-QAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
+D ++ D G VVGW+HSHPG+ CWLS +DI TQ + +
Sbjct: 130 YEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQD 189
Query: 299 RAVAVVVDPIQSVKE 313
VA+VVDP++S+++
Sbjct: 190 PYVAIVVDPLKSLED 204
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSV---- 244
+ V +S LA K+L H G +EVMG++LG + T + D F +P GT V
Sbjct: 72 QNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGN-TFVIFDCFELPVEGTETMVNAHM 130
Query: 245 EAVDPVFQAKMLDMLKQTGRPEM---VVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
E+ + + Q + + R E ++GWYHSHPG+ CWLS +D+ TQ + + +
Sbjct: 131 ESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYL 190
Query: 302 AVVVDPIQS 310
A+VVDP +S
Sbjct: 191 AIVVDPHKS 199
>sp|A6ZXB7|CSN5_YEAS7 COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRI1 PE=3 SV=2
Length = 440
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEA---- 246
V IS L+ K+ + G +E+MG+++G F + + V+D F +P GT V A
Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLES 129
Query: 247 -------VDPVF-QAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
+D ++ D G VVGW+HSHPG+ CWLS +DI TQ + +
Sbjct: 130 YEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQD 189
Query: 299 RAVAVVVDPIQSVKE 313
VA+VVDP++S+++
Sbjct: 190 PYVAIVVDPLKSLED 204
>sp|Q12468|CSN5_YEAST COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRI1 PE=1 SV=2
Length = 440
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEA---- 246
V IS L+ K+ + G +E+MG+++G F + + V+D F +P GT V A
Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLES 129
Query: 247 -------VDPVF-QAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
+D ++ D G VVGW+HSHPG+ CWLS +DI TQ + +
Sbjct: 130 YEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQD 189
Query: 299 RAVAVVVDPIQSVKE 313
VA+VVDP++S+++
Sbjct: 190 PYVAIVVDPLKSLED 204
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 31/159 (19%)
Query: 172 GLSQAP--------PVSDGPVVDTAEQVYISSLALLKMLKHGR------------AGVPM 211
GL+Q+P P ++ P +D++E S L K++ HG +
Sbjct: 501 GLAQSPAVNTPSITPTTNKPNIDSSEASKKYS-KLRKIIVHGEVFQEFMRLAENNTKRSI 559
Query: 212 EVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDP--VFQAKMLDMLKQTGRPEMVV 269
E G++ G ++ R+ + Q GT + ++ +F+ ++ + L + +
Sbjct: 560 ETCGILSGTLSND-VFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDL-------LTL 611
Query: 270 GWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
GW H+HP C+LS VD++T S++ L + A+AVV+ P+
Sbjct: 612 GWIHTHPTQDCFLSAVDVHTHCSYQYLLQEAIAVVISPM 650
>sp|B5X8M4|BRCC3_SALSA Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2
SV=1
Length = 260
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDP- 249
V++ S A L + H + EVMGL +GE V + V + ++ + P
Sbjct: 6 VHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPE 65
Query: 250 ---VFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
+ + + TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 66 QLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 123
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQT---GTGVSVEA 246
QV +SS ALL M H + EV+GL+ G + + +V++V A TG+ E
Sbjct: 578 QVKVSSEALLIMDLHSHVSM-AEVIGLLGGRYSE--ADKVVEVCAAEPCNSLSTGLQCE- 633
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 305
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A+ +
Sbjct: 634 MDPVSQTQASETLAARGY--SVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFI 690
>sp|B2RYM5|BRCC3_RAT Lys-63-specific deubiquitinase BRCC36 OS=Rattus norvegicus GN=Brcc3
PE=2 SV=1
Length = 291
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Query: 192 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDE------YTVRVIDVFAMPQTGTGVSVE 245
++ S A L L H + EVMGL +GE D+ + DV +P+ + V
Sbjct: 13 HLESDAFLVCLNHALSTEKEEVMGLCIGELNDDVRSESKFAHAGSDVCTVPEKVDSIRVV 72
Query: 246 AVDPVFQAKMLDMLKQ----------------------TGRPEMVVGWYHSHPGFGCWLS 283
+ V + D K TGRP VVGWYHSHP W S
Sbjct: 73 HIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHITVWPS 132
Query: 284 GVDINTQQSFEALSERAVAVV 304
VD+ TQ ++ + + V ++
Sbjct: 133 HVDVRTQAMYQMMDQGFVGLI 153
>sp|Q4VA72|BRCC3_XENTR Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis
GN=brcc3 PE=2 SV=1
Length = 261
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ V+I A L + H + EVMGL +GE + V + V + ++ +
Sbjct: 4 QAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEIS 63
Query: 249 P---VFQAKMLDMLKQ-TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL 296
P D L + TGRP VVGWYHSHP W S VD+ TQ ++ +
Sbjct: 64 PEQLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMM 115
>sp|Q7M757|BRC3L_MOUSE Lys-63-specific deubiquitinase BRCC36-like OS=Mus musculus
GN=C6.1al PE=2 SV=1
Length = 291
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 28/144 (19%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDE---------------------YTV 227
+ VY+ S A L L H + EVMGL +G+ D
Sbjct: 10 QAVYLESDAFLVCLNHALSTEKEEVMGLCIGQLNDHGRSDSRLAYAGAEMCTVAKKMEAT 69
Query: 228 RVIDVFAM----PQTGTGVSVEAVDPVFQAKMLD---MLKQTGRPEMVVGWYHSHPGFGC 280
R++ + ++ T VE A ++ + +QTGRP VVGWYHSHP
Sbjct: 70 RIVHIHSVIILRRSDKTKDRVEISPEQLSAASIEAERLAEQTGRPMRVVGWYHSHPHITV 129
Query: 281 WLSGVDINTQQSFEALSERAVAVV 304
W S VD+ TQ ++ + + V ++
Sbjct: 130 WPSHVDVRTQAMYQMMDQSFVGLI 153
>sp|Q5PPY6|EIF3H_XENLA Eukaryotic translation initiation factor 3 subunit H OS=Xenopus
laevis GN=eif3h PE=2 SV=1
Length = 334
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 182 GPVVDTA-EQVYISSLALLKMLKH-GRAGVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ- 237
P+ +TA +QV I L +LK++KH G EV+ G++LG VD+ + + + F PQ
Sbjct: 11 APIAETAVKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDD-RLEITNCFPFPQH 69
Query: 238 TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 297
T V + V +Q +M+ L+ + VGWY S +G ++S +++Q S++
Sbjct: 70 TEDDVDFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAI 126
Query: 298 ERAVAVVVDPIQS 310
E +V ++ DPI++
Sbjct: 127 EESVVLIYDPIKT 139
>sp|Q66GV6|BRCC3_XENLA Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis GN=brcc3
PE=2 SV=1
Length = 261
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM------------- 235
+ V+I A L + H + EVMGL +GE + V + V +
Sbjct: 4 QAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEIS 63
Query: 236 PQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEA 295
P+ + ++EA ++ D+ TGRP VVGWYHSHP W S VD+ TQ ++
Sbjct: 64 PEQLSAATIEA------DRLADI---TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQM 114
Query: 296 L 296
+
Sbjct: 115 M 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,807,061
Number of Sequences: 539616
Number of extensions: 9076637
Number of successful extensions: 26787
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 26546
Number of HSP's gapped (non-prelim): 279
length of query: 574
length of database: 191,569,459
effective HSP length: 123
effective length of query: 451
effective length of database: 125,196,691
effective search space: 56463707641
effective search space used: 56463707641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)