Your job contains 1 sequence.
>psy15735
MSNNLPQLGKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSIS
INYRKNELEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEK
MSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLDRNMERLLRLGSGMPGLSQAPPVS
DGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGT
GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA
VAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANII
QCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGY
ISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTL
VSWIYLRFYQYHTNGTRGDMADNFNFANFFPTIIQPPIAVVCNTIHEFLVRIGLCRKMVR
KFDMSVAPSSGITITLPGIDPNDAERRSSVYCKE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy15735
(574 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species... 660 9.4e-82 2
ZFIN|ZDB-GENE-070410-56 - symbol:psmd14 "proteasome (pros... 740 2.8e-73 1
UNIPROTKB|Q17QP9 - symbol:PSMD14 "Proteasome (Prosome, ma... 736 7.5e-73 1
UNIPROTKB|O00487 - symbol:PSMD14 "26S proteasome non-ATPa... 736 7.5e-73 1
MGI|MGI:1913284 - symbol:Psmd14 "proteasome (prosome, mac... 736 7.5e-73 1
RGD|1594532 - symbol:Psmd14 "proteasome (prosome, macropa... 736 7.5e-73 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 620 3.3e-71 2
FB|FBgn0028694 - symbol:Rpn11 "Regulatory particle non-AT... 714 1.6e-70 1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer... 617 6.0e-70 2
UNIPROTKB|E1C6N0 - symbol:PSMD14 "Uncharacterized protein... 695 1.7e-68 1
UNIPROTKB|F1RPQ3 - symbol:PSMD14 "Uncharacterized protein... 683 3.1e-67 1
UNIPROTKB|F1LMW6 - symbol:Psmd14 "Protein Psmd14" species... 669 9.4e-66 1
WB|WBGene00004467 - symbol:rpn-11 species:6239 "Caenorhab... 661 6.7e-65 1
UNIPROTKB|O76577 - symbol:rpn-11 "26S proteasome non-ATPa... 661 6.7e-65 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 549 2.9e-64 2
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 549 2.9e-64 2
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula... 606 2.6e-61 2
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru... 590 2.2e-57 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 582 1.6e-56 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 531 4.0e-51 1
MGI|MGI:1930765 - symbol:Tmem115 "transmembrane protein 1... 464 5.0e-44 1
UNIPROTKB|Q12893 - symbol:TMEM115 "Transmembrane protein ... 462 8.1e-44 1
ZFIN|ZDB-GENE-050913-157 - symbol:tmem115 "transmembrane ... 462 8.1e-44 1
RGD|1310540 - symbol:Tmem115 "transmembrane protein 115" ... 460 1.3e-43 1
UNIPROTKB|E2QWQ9 - symbol:TMEM115 "Uncharacterized protei... 457 2.8e-43 1
UNIPROTKB|A4FUB8 - symbol:TMEM115 "Transmembrane protein ... 456 3.5e-43 1
UNIPROTKB|F1SJ20 - symbol:TMEM115 "Uncharacterized protei... 456 3.5e-43 1
UNIPROTKB|H9L111 - symbol:H9L111 "Uncharacterized protein... 455 4.5e-43 1
UNIPROTKB|C9JW37 - symbol:PSMD14 "26S proteasome non-ATPa... 377 1.3e-34 1
FB|FBgn0027053 - symbol:CSN5 "COP9 complex homolog subuni... 311 3.5e-27 1
TAIR|locus:2017764 - symbol:CSN5A "COP9 signalosome 5A" s... 291 3.9e-27 2
UNIPROTKB|Q5ZLC3 - symbol:COPS5 "Uncharacterized protein"... 305 1.6e-26 1
UNIPROTKB|F1MBP8 - symbol:COPS5 "Uncharacterized protein"... 305 1.6e-26 1
UNIPROTKB|E2QWE0 - symbol:COPS5 "Uncharacterized protein"... 305 1.6e-26 1
UNIPROTKB|Q92905 - symbol:COPS5 "COP9 signalosome complex... 305 1.6e-26 1
UNIPROTKB|F2Z540 - symbol:COPS5 "Uncharacterized protein"... 305 1.6e-26 1
MGI|MGI:1349415 - symbol:Cops5 "COP9 (constitutive photom... 305 1.6e-26 1
RGD|1310301 - symbol:Cops5 "COP9 signalosome subunit 5" s... 305 1.6e-26 1
DICTYBASE|DDB_G0284597 - symbol:csn5 "Mov34/MPN/PAD-1 fam... 304 2.1e-26 1
ZFIN|ZDB-GENE-040426-1686 - symbol:cops5 "COP9 constituti... 303 2.7e-26 1
TAIR|locus:2032288 - symbol:CSN5B "COP9-signalosome 5B" s... 293 3.3e-25 1
UNIPROTKB|G4N5N6 - symbol:MGG_05274 "COP9 signalosome com... 292 4.3e-25 1
WB|WBGene00000817 - symbol:csn-5 species:6239 "Caenorhabd... 285 2.5e-24 1
UNIPROTKB|P91001 - symbol:csn-5 "COP9 signalosome complex... 285 2.5e-24 1
ASPGD|ASPL0000041877 - symbol:csnE species:162425 "Emeric... 280 8.8e-24 1
UNIPROTKB|E5RHF2 - symbol:COPS5 "COP9 signalosome complex... 274 4.0e-23 1
POMBASE|SPAC1687.13c - symbol:csn5 "COP9/signalosome comp... 266 2.9e-22 1
DICTYBASE|DDB_G0278061 - symbol:tmem115 "transmembrane pr... 263 6.2e-22 1
WB|WBGene00008687 - symbol:F11A10.6 species:6239 "Caenorh... 231 7.8e-17 1
TAIR|locus:2077377 - symbol:AT3G07950 "AT3G07950" species... 220 1.4e-16 1
ASPGD|ASPL0000017304 - symbol:AN3692 species:162425 "Emer... 184 1.3e-12 2
SGD|S000002375 - symbol:RRI1 "Catalytic subunit of the CO... 190 9.1e-12 1
UNIPROTKB|Q5PPY6 - symbol:eif3h "Eukaryotic translation i... 162 5.9e-09 1
RGD|1588543 - symbol:Brcc3 "BRCA1/BRCA2-containing comple... 117 5.5e-08 2
UNIPROTKB|Q6P381 - symbol:eif3h "Eukaryotic translation i... 153 6.2e-08 1
UNIPROTKB|Q5R9L6 - symbol:BRCC3 "Lys-63-specific deubiqui... 117 6.4e-08 2
UNIPROTKB|B5RI54 - symbol:eif3h "Eukaryotic translation i... 151 1.1e-07 1
UNIPROTKB|Q5ZLE6 - symbol:EIF3H "Eukaryotic translation i... 151 1.1e-07 1
UNIPROTKB|B5FY35 - symbol:EIF3H "Eukaryotic translation i... 150 1.5e-07 1
CGD|CAL0001243 - symbol:orf19.3763 species:5476 "Candida ... 151 1.5e-07 2
UNIPROTKB|Q59M24 - symbol:CaO19.11247 "Putative uncharact... 151 1.5e-07 2
UNIPROTKB|B5X8M4 - symbol:brcc3 "Lys-63-specific deubiqui... 146 1.7e-07 1
ZFIN|ZDB-GENE-051030-42 - symbol:eif3hb "eukaryotic trans... 149 1.7e-07 1
UNIPROTKB|P46736 - symbol:BRCC3 "Lys-63-specific deubiqui... 117 2.0e-07 2
UNIPROTKB|B0KWU8 - symbol:BRCC3 "Lys-63-specific deubiqui... 117 2.0e-07 2
RGD|735178 - symbol:Eif3h "eukaryotic translation initiat... 147 3.3e-07 1
UNIPROTKB|Q56JZ5 - symbol:EIF3H "Eukaryotic translation i... 146 4.2e-07 1
UNIPROTKB|O15372 - symbol:EIF3H "Eukaryotic translation i... 146 4.2e-07 1
UNIPROTKB|B3KS98 - symbol:EIF3S3 "Eukaryotic translation ... 146 4.6e-07 1
UNIPROTKB|Q4VA72 - symbol:brcc3 "Lys-63-specific deubiqui... 142 5.0e-07 1
UNIPROTKB|Q66GV6 - symbol:brcc3 "Lys-63-specific deubiqui... 142 5.0e-07 1
UNIPROTKB|A5PJP6 - symbol:BRCC3 "Lys-63-specific deubiqui... 117 6.5e-07 2
UNIPROTKB|G5E595 - symbol:BRCC3 "Lys-63-specific deubiqui... 117 6.5e-07 2
MGI|MGI:1915385 - symbol:Eif3h "eukaryotic translation in... 144 7.0e-07 1
UNIPROTKB|F1RZ41 - symbol:BRCC36 "Uncharacterized protein... 117 7.4e-07 2
MGI|MGI:2389572 - symbol:Brcc3 "BRCA1/BRCA2-containing co... 117 7.4e-07 2
MGI|MGI:3647286 - symbol:Gm5136 "predicted gene 5136" spe... 125 7.5e-07 2
ZFIN|ZDB-GENE-040808-19 - symbol:eif3ha "eukaryotic trans... 142 1.1e-06 1
UNIPROTKB|F1NJR7 - symbol:MYSM1 "Histone H2A deubiquitina... 142 4.7e-06 1
UNIPROTKB|F1NCM9 - symbol:MYSM1 "Histone H2A deubiquitina... 142 4.7e-06 1
UNIPROTKB|Q5F3F2 - symbol:MYSM1 "Histone H2A deubiquitina... 142 4.7e-06 1
UNIPROTKB|Q5VVJ2 - symbol:MYSM1 "Histone H2A deubiquitina... 141 6.0e-06 1
ASPGD|ASPL0000029143 - symbol:AN5121 species:162425 "Emer... 135 7.0e-06 1
CGD|CAL0005997 - symbol:orf19.2928 species:5476 "Candida ... 134 9.4e-06 1
UNIPROTKB|Q5AIC5 - symbol:CaO19.10445 "Putative uncharact... 134 9.4e-06 1
UNIPROTKB|E1B741 - symbol:MYSM1 "Uncharacterized protein"... 138 1.3e-05 1
MGI|MGI:2444584 - symbol:Mysm1 "myb-like, SWIRM and MPN d... 140 1.3e-05 2
UNIPROTKB|F1S7A6 - symbol:MYSM1 "Uncharacterized protein"... 137 1.7e-05 1
UNIPROTKB|F1PLC7 - symbol:MYSM1 "Uncharacterized protein"... 135 2.6e-05 1
TAIR|locus:2019903 - symbol:AMSH2 "AT1G10600" species:370... 125 2.6e-05 1
RGD|1311787 - symbol:Mysm1 "myb-like, SWIRM and MPN domai... 142 3.2e-05 2
UNIPROTKB|A0JMR6 - symbol:mysm1 "Histone H2A deubiquitina... 133 4.4e-05 1
UNIPROTKB|B6MUN4 - symbol:MYSM1 "Histone H2A deubiquitina... 132 5.5e-05 1
UNIPROTKB|F1P4L2 - symbol:BRCC3 "Uncharacterized protein"... 122 6.3e-05 1
ZFIN|ZDB-GENE-041014-28 - symbol:mysm1 "Myb-like, SWIRM a... 131 7.3e-05 1
TAIR|locus:2196469 - symbol:TIF3H1 "AT1G10840" species:37... 122 0.00018 1
DICTYBASE|DDB_G0284037 - symbol:DDB_G0284037 "MPN/PAD-1 d... 119 0.00079 2
>TAIR|locus:2171696 [details] [associations]
symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
Uniprot:Q9LT08
Length = 308
Score = 660 (237.4 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 132/154 (85%), Positives = 140/154 (90%)
Query: 160 MERLLRL-GSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLML 218
MERL R+ G+G GL A P D P +DT+EQVYISSLALLKMLKHGRAGVPMEVMGLML
Sbjct: 1 MERLQRIFGAG-GGLGHASP--DSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLML 57
Query: 219 GEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF 278
GEFVDEYTVRV+DVFAMPQ+GTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGF
Sbjct: 58 GEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGF 117
Query: 279 GCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
GCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVK
Sbjct: 118 GCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK 151
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 105/156 (67%), Positives = 130/156 (83%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR INP ++LGQEPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 152 GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNEL 211
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+KMLLNLHKK W DGL+L+ ++ H K NE TV +ML LA YNKA++EE+++SPE+LAI
Sbjct: 212 EEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAI 271
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCLDRNMERLL 164
NVG+QD K+HLEE V LM++NI+Q L ++ ++
Sbjct: 272 VNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVV 307
Score = 179 (68.1 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 34/60 (56%), Positives = 47/60 (78%)
Query: 308 IQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLGGKL 367
+Q + LA YNKA++EE+++SPE+LAI NVG+QD K+HLEE V LM++NI+Q LG L
Sbjct: 244 VQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTML 303
>ZFIN|ZDB-GENE-070410-56 [details] [associations]
symbol:psmd14 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 14" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 ZFIN:ZDB-GENE-070410-56 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CR450841
IPI:IPI00800873 PRIDE:F1QHE5 Ensembl:ENSDART00000091901 Bgee:F1QHE5
Uniprot:F1QHE5
Length = 310
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 144/153 (94%), Positives = 148/153 (96%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGLSQ PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLSQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 126/148 (85%), Positives = 139/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCKLNE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKLNETIVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 49/87 (56%), Positives = 61/87 (70%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ + L+E V + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGLTLQDYSEHCKLNETIV-------KEMLELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>UNIPROTKB|Q17QP9 [details] [associations]
symbol:PSMD14 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 14" species:9913 "Bos taurus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0070628 "proteasome
binding" evidence=IDA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0061133 "endopeptidase
activator activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000502 GO:GO:0061133
GO:GO:0070628 eggNOG:COG1310 MEROPS:M67.001 GO:GO:0004221
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742 OrthoDB:EOG4R23V7
EMBL:DAAA02004429 EMBL:DAAA02004430 EMBL:BC118241 IPI:IPI00689118
RefSeq:NP_001069535.1 UniGene:Bt.31257 SMR:Q17QP9 STRING:Q17QP9
Ensembl:ENSBTAT00000046166 GeneID:535683 KEGG:bta:535683
InParanoid:Q17QP9 NextBio:20876811 Uniprot:Q17QP9
Length = 310
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 143/153 (93%), Positives = 147/153 (96%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>UNIPROTKB|O00487 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP;TAS]
[GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0070536
"protein K63-linked deubiquitination" evidence=IMP;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0061133 "endopeptidase activator activity" evidence=IMP]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IMP] [GO:0070628 "proteasome binding" evidence=IDA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=IMP] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0046872 GO:GO:0000082 GO:GO:0008237 EMBL:CH471058
GO:GO:0051436 GO:GO:0000724 GO:GO:0061133 GO:GO:0070628
GO:GO:0008541 GO:GO:0000216 GO:GO:0000209 eggNOG:COG1310
GO:GO:0070536 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006303 MEROPS:M67.001 GO:GO:0004221 GO:GO:0006521
GO:GO:0061136 Reactome:REACT_383 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP EMBL:U86782
EMBL:AK055128 EMBL:BC066336 IPI:IPI00024821 RefSeq:NP_005796.1
UniGene:Hs.740477 ProteinModelPortal:O00487 SMR:O00487
IntAct:O00487 STRING:O00487 PhosphoSite:O00487 OGP:O00487
REPRODUCTION-2DPAGE:IPI00024821 PaxDb:O00487 PeptideAtlas:O00487
PRIDE:O00487 Ensembl:ENST00000409682 GeneID:10213 KEGG:hsa:10213
UCSC:uc002ubu.2 CTD:10213 GeneCards:GC02P162164 HGNC:HGNC:16889
HPA:HPA002114 MIM:607173 neXtProt:NX_O00487 PharmGKB:PA134957776
HOVERGEN:HBG053742 InParanoid:O00487 OrthoDB:EOG4R23V7
BindingDB:O00487 ChEMBL:CHEMBL2007629 GenomeRNAi:10213
NextBio:38668 ArrayExpress:O00487 Bgee:O00487 CleanEx:HS_PSMD14
Genevestigator:O00487 GermOnline:ENSG00000115233 Uniprot:O00487
Length = 310
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 143/153 (93%), Positives = 147/153 (96%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>MGI|MGI:1913284 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISO] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0061133 "endopeptidase activator
activity" evidence=ISO] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070628 "proteasome
binding" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913284 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0004175 GO:GO:0000724 GO:GO:0061133
GO:GO:0008541 eggNOG:COG1310 GO:GO:0070536 GO:GO:0006303
MEROPS:M67.001 GO:GO:0004221 GO:GO:0061136 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 EMBL:Y13071 EMBL:AK012013 EMBL:AK151104
EMBL:AK151733 EMBL:BC003742 IPI:IPI00113262 RefSeq:NP_067501.2
UniGene:Mm.218198 ProteinModelPortal:O35593 SMR:O35593
IntAct:O35593 MINT:MINT-4049993 STRING:O35593 PhosphoSite:O35593
REPRODUCTION-2DPAGE:O35593 PaxDb:O35593 PRIDE:O35593
Ensembl:ENSMUST00000028278 GeneID:59029 KEGG:mmu:59029
InParanoid:O35593 BindingDB:O35593 ChiTaRS:PSMD14 NextBio:314614
Bgee:O35593 Genevestigator:O35593 GermOnline:ENSMUSG00000026914
Uniprot:O35593
Length = 310
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 143/153 (93%), Positives = 147/153 (96%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>RGD|1594532 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10116 "Rattus norvegicus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=ISO] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0070628 "proteasome binding" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0000502 GO:GO:0061133 eggNOG:COG1310 MEROPS:M67.001
EMBL:CH473949 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 IPI:IPI00372125 EMBL:BC097427 EMBL:BC158645
RefSeq:NP_001020860.1 UniGene:Rn.161794 SMR:Q4V8E2 IntAct:Q4V8E2
STRING:Q4V8E2 GeneID:311078 KEGG:rno:311078 UCSC:RGD:1594532
InParanoid:Q4V8E2 NextBio:662956 Genevestigator:Q4V8E2
Uniprot:Q4V8E2
Length = 310
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 143/153 (93%), Positives = 147/153 (96%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 620 (223.3 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 118/153 (77%), Positives = 135/153 (88%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
++RLL G+G+ G AP SDGP +D +E VYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 4 LQRLLGQGAGLGGA--APTQSDGPAIDNSETVYISSLALLKMLKHGRAGVPMEVMGLMLG 61
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD++T+ V DVFAMPQ+GTGVSVEAVD VFQ KM+DML+QTGR +MVVGWYHSHPGFG
Sbjct: 62 EFVDDFTIHVHDVFAMPQSGTGVSVEAVDDVFQTKMMDMLRQTGRDQMVVGWYHSHPGFG 121
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD+NTQQSFE L++RAVAVV+DPIQSVK
Sbjct: 122 CWLSSVDVNTQQSFEQLNKRAVAVVIDPIQSVK 154
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 80/153 (52%), Positives = 108/153 (70%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR I+ +++GQEPRQ+TSN+GHL K S+QALIHGLNRHYYS++I+Y K E
Sbjct: 155 GKVVIDAFRTIDTTTLMMGQEPRQSTSNVGHLNKPSIQALIHGLNRHYYSLNIDYHKTEY 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E MLLNLHKK W GL L DYN N M+ +AK YN+ ++EE++++ +QL
Sbjct: 215 ETNMLLNLHKKNWQSGLKLVDYNHKEVENLDNTEKMVSIAKLYNQRVQEEKELTEDQLKT 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCLDRNME 161
+ VGKQDPK+HL + + L+ N+ L N++
Sbjct: 275 RYVGKQDPKKHLSDTAEKLIDENVSSLLTSNID 307
Score = 119 (46.9 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 305 VDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCL 363
+D + + +AK YN+ ++EE++++ +QL + VGKQDPK+HL + + L+ N+ L
Sbjct: 244 LDNTEKMVSIAKLYNQRVQEEKELTEDQLKTRYVGKQDPKKHLSDTAEKLIDENVSSLL 302
>FB|FBgn0028694 [details] [associations]
symbol:Rpn11 "Regulatory particle non-ATPase 11" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IMP;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005875 EMBL:AE014134 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0004175 GO:GO:0008541
GO:GO:0032436 GO:GO:0009987 eggNOG:COG1310 MEROPS:M67.001
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
KO:K03030 OMA:MVLGQEP EMBL:AF145313 EMBL:AY070977 EMBL:AF195189
RefSeq:NP_608905.1 UniGene:Dm.3343 ProteinModelPortal:Q9V3H2
SMR:Q9V3H2 IntAct:Q9V3H2 MINT:MINT-819727 STRING:Q9V3H2
PaxDb:Q9V3H2 PRIDE:Q9V3H2 EnsemblMetazoa:FBtr0079027 GeneID:33738
KEGG:dme:Dmel_CG18174 CTD:33738 FlyBase:FBgn0028694
InParanoid:Q9V3H2 OrthoDB:EOG4SQVC9 PhylomeDB:Q9V3H2
GenomeRNAi:33738 NextBio:785010 Bgee:Q9V3H2 GermOnline:CG18174
Uniprot:Q9V3H2
Length = 308
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 141/153 (92%), Positives = 145/153 (94%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG MP QA P +D PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGAMP---QAAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 57
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTV+VIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 58 EFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 117
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 118 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 150
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 127/156 (81%), Positives = 143/156 (91%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLINPNM+VLGQEPRQTTSNLGHLQK SVQALIHGLNRHYYSISINYRKNEL
Sbjct: 151 GKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNEL 210
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+W DGL+L DYNEHC +NE TV +ML+LAK+YNK+LE+EEKM+PEQLAI
Sbjct: 211 EQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAI 270
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCLDRNMERLL 164
KNVGKQDPKRHLEEKVD +M NI+QCL ++ ++
Sbjct: 271 KNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIV 306
Score = 238 (88.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 49/87 (56%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W G+ ++ +++E VA ++D LAK+YNK+LE+EEKM+PEQLAIKNVGK
Sbjct: 223 WKDGLTLSDYNEHCSINEDTVAEMLD-------LAKNYNKSLEDEEKMTPEQLAIKNVGK 275
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEEKVD +M NI+QCLG L
Sbjct: 276 QDPKRHLEEKVDKVMQNNIVQCLGAML 302
>ASPGD|ASPL0000076795 [details] [associations]
symbol:AN4492 species:162425 "Emericella nidulans"
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
"mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
Length = 338
Score = 617 (222.3 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 121/158 (76%), Positives = 139/158 (87%)
Query: 156 LDRNMERLLRLGSGMPGLSQAPPVSDGP-VVDTAEQVYISSLALLKMLKHGRAGVPMEVM 214
+DR + R+++ GM G++ + P +D P ++D +E V+ISSLALLKML+HGRAGVPMEVM
Sbjct: 1 MDR-LTRMIQAAQGM-GMNGSAPGADTPNLLDNSETVHISSLALLKMLRHGRAGVPMEVM 58
Query: 215 GLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHS 274
GLMLGEFVDEYTVRV DVFAMPQ+GTGVSVEAVDPVFQ KM+DML+QTGRPE VVGWYHS
Sbjct: 59 GLMLGEFVDEYTVRVTDVFAMPQSGTGVSVEAVDPVFQTKMMDMLRQTGRPEPVVGWYHS 118
Query: 275 HPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
HPGFGCWLS VDINTQQSFE L+ RAVAVVVDPIQSVK
Sbjct: 119 HPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVK 156
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 85/168 (50%), Positives = 117/168 (69%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI P +V+GQEPRQTTSNLGHL K S+QALIHGLNRHYYSI INYRK L
Sbjct: 157 GKVVIDAFRLIQPQTVVMGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIGINYRKTGL 216
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+ ML+NLHK+ W + L + D+++ C+ N + ++ LA+ Y K ++EE +++ +QL
Sbjct: 217 EENMLMNLHKQVWTEALQMNDFHDECQHNVDRMKQLVNLAEGYEKRVKEETELTKDQLKT 276
Query: 129 KNVGKQDPKRHLEEKVDTLMTANII----QCLDRNMERLLRLGSGMPG 172
+ VGK DPK+H+E+ L+ NI+ Q +D+ + R +G G
Sbjct: 277 RYVGKVDPKKHIEDVSQQLIEDNIVAVSRQMIDKEAS-VARQSNGADG 323
Score = 110 (43.8 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 305 VDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANII 360
VD ++ + LA+ Y K ++EE +++ +QL + VGK DPK+H+E+ L+ NI+
Sbjct: 246 VDRMKQLVNLAEGYEKRVKEETELTKDQLKTRYVGKVDPKKHIEDVSQQLIEDNIV 301
>UNIPROTKB|E1C6N0 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0061133 "endopeptidase activator activity"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0070628 "proteasome binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:AADN02058674
IPI:IPI00604055 Ensembl:ENSGALT00000018142 ArrayExpress:E1C6N0
Uniprot:E1C6N0
Length = 300
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 135/143 (94%), Positives = 138/143 (96%)
Query: 170 MPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRV 229
MPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV
Sbjct: 1 MPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRV 59
Query: 230 IDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINT 289
IDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINT
Sbjct: 60 IDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINT 119
Query: 290 QQSFEALSERAVAVVVDPIQSVK 312
QQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 QQSFEALSERAVAVVVDPIQSVK 142
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 126/148 (85%), Positives = 139/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 143 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 202
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCKLNE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 203 EQKMLLNLHKKSWMEGLTLQDYSEHCKLNETVVKEMLELAKNYNKAVEEEDKMTPEQLAI 262
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 263 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 290
Score = 238 (88.8 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 49/87 (56%), Positives = 61/87 (70%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ + L+E V + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 215 WMEGLTLQDYSEHCKLNETVV-------KEMLELAKNYNKAVEEEDKMTPEQLAIKNVGK 267
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 268 QDPKRHLEEHVDVLMTSNIVQCLAAML 294
>UNIPROTKB|F1RPQ3 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070628 "proteasome binding" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0061133
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CU571357
Ensembl:ENSSSCT00000017304 Uniprot:F1RPQ3
Length = 310
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 134/153 (87%), Positives = 141/153 (92%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+++ LG M + PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MKKVESLGKNMVRKNMGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTVRVIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 119
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK
Sbjct: 120 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 212
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 213 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 272
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 273 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 300
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 225 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 277
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 278 QDPKRHLEEHVDVLMTSNIVQCLAAML 304
>UNIPROTKB|F1LMW6 [details] [associations]
symbol:Psmd14 "Protein Psmd14" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 IPI:IPI00372125
Ensembl:ENSRNOT00000006605 ArrayExpress:F1LMW6 Uniprot:F1LMW6
Length = 294
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 125/148 (84%), Positives = 138/148 (93%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLIN NMMVLG EPRQTTSNLGHL K S+QALIHGLNRHYYSI+INYRKNEL
Sbjct: 137 GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNEL 196
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK+WM+GL+LQDY+EHCK NE V +MLELAK+YNKA+EEE+KM+PEQLAI
Sbjct: 197 EQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAI 256
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGKQDPKRHLEE VD LMT+NI+QCL
Sbjct: 257 KNVGKQDPKRHLEEHVDVLMTSNIVQCL 284
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 129/135 (95%), Positives = 132/135 (97%)
Query: 178 PVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQ 237
P +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRVIDVFAMPQ
Sbjct: 2 PPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQ 61
Query: 238 TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 297
+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS
Sbjct: 62 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALS 121
Query: 298 ERAVAVVVDPIQSVK 312
ERAVAVVVDPIQSVK
Sbjct: 122 ERAVAVVVDPIQSVK 136
Score = 237 (88.5 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 50/87 (57%), Positives = 63/87 (72%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W+ G+ T Q + + +VV + + ELAK+YNKA+EEE+KM+PEQLAIKNVGK
Sbjct: 209 WMEGL---TLQDYSEHCKHNESVVKEML----ELAKNYNKAVEEEDKMTPEQLAIKNVGK 261
Query: 341 QDPKRHLEEKVDTLMTANIIQCLGGKL 367
QDPKRHLEE VD LMT+NI+QCL L
Sbjct: 262 QDPKRHLEEHVDVLMTSNIVQCLAAML 288
>WB|WBGene00004467 [details] [associations]
symbol:rpn-11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0006508 GO:GO:0040011 GO:GO:0008237 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 139/194 (71%), Positives = 153/194 (78%)
Query: 160 MERLLRLGS--GMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLM 217
MER LRLG G G A P D VDT+E VYISSLALLKMLKHGRAGVPMEVMGLM
Sbjct: 1 MERFLRLGGLGGNLGTFGANP-QDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLM 59
Query: 218 LGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 277
LGEFVD+YTV VIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG
Sbjct: 60 LGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 119
Query: 278 FGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKN 337
FGCWLSGVDINTQQSFEALS+RAVAVVVDPIQSVK ++ ++P+ +A+
Sbjct: 120 FGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKV-----VIDAFRTINPQSMALNQ 174
Query: 338 VGKQDPKR--HLEE 349
+Q HL++
Sbjct: 175 EPRQTTSNLGHLQK 188
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/148 (62%), Positives = 120/148 (81%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR INP M L QEPRQTTSNLGHLQK S+QALIHGLNRHYYSI I YR ++L
Sbjct: 155 GKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDL 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNL+K +WMD +S+++Y++ + N+ + ML+LAK+Y KALE+E+ M+ ++LAI
Sbjct: 215 EQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAI 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGK DPKRH+ ++V ++ NI+Q L
Sbjct: 275 KNVGKMDPKRHIADEVSKMLNDNIVQSL 302
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 29/60 (48%), Positives = 47/60 (78%)
Query: 308 IQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLGGKL 367
++++ +LAK+Y KALE+E+ M+ ++LAIKNVGK DPKRH+ ++V ++ NI+Q L G +
Sbjct: 247 LKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMM 306
>UNIPROTKB|O76577 [details] [associations]
symbol:rpn-11 "26S proteasome non-ATPase regulatory subunit
14" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0040011
GO:GO:0008237 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 GO:GO:0005838 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 139/194 (71%), Positives = 153/194 (78%)
Query: 160 MERLLRLGS--GMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLM 217
MER LRLG G G A P D VDT+E VYISSLALLKMLKHGRAGVPMEVMGLM
Sbjct: 1 MERFLRLGGLGGNLGTFGANP-QDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLM 59
Query: 218 LGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 277
LGEFVD+YTV VIDVFAMPQ+GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG
Sbjct: 60 LGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPG 119
Query: 278 FGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKN 337
FGCWLSGVDINTQQSFEALS+RAVAVVVDPIQSVK ++ ++P+ +A+
Sbjct: 120 FGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKV-----VIDAFRTINPQSMALNQ 174
Query: 338 VGKQDPKR--HLEE 349
+Q HL++
Sbjct: 175 EPRQTTSNLGHLQK 188
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/148 (62%), Positives = 120/148 (81%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR INP M L QEPRQTTSNLGHLQK S+QALIHGLNRHYYSI I YR ++L
Sbjct: 155 GKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDL 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNL+K +WMD +S+++Y++ + N+ + ML+LAK+Y KALE+E+ M+ ++LAI
Sbjct: 215 EQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAI 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
KNVGK DPKRH+ ++V ++ NI+Q L
Sbjct: 275 KNVGKMDPKRHIADEVSKMLNDNIVQSL 302
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 29/60 (48%), Positives = 47/60 (78%)
Query: 308 IQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLGGKL 367
++++ +LAK+Y KALE+E+ M+ ++LAIKNVGK DPKRH+ ++V ++ NI+Q L G +
Sbjct: 247 LKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMM 306
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 549 (198.3 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 101/129 (78%), Positives = 115/129 (89%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
+ DT+EQVYIS LALLK+LKHGRAGVPMEVMGLMLGE VDEYT+R++DVFAMPQ+G VS
Sbjct: 26 LADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVS 85
Query: 244 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 303
VEAVDPV+Q ML+ LK+TGR EMVVGWYHSHPGFGCWLSG D+NTQ+SFE L+ R + V
Sbjct: 86 VEAVDPVYQTNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGV 145
Query: 304 VVDPIQSVK 312
VVDPIQSVK
Sbjct: 146 VVDPIQSVK 154
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 79/148 (53%), Positives = 112/148 (75%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVID FRLINP++++LGQEPRQTTSN+G+L K ++ AL+HGLNR+YYSI INYRKNEL
Sbjct: 155 GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLNRNYYSIVINYRKNEL 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+ MLLNLHK W + L L D++E K ++ T+ D+ +L YNK L E K + E++ +
Sbjct: 215 EKNMLLNLHKDMWTNPLKLNDFHEQKKSSDETLEDIKKLTTLYNKNLRNEMKKTSEEILL 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+N+GK D K+ ++ V+TL+ +I+ C+
Sbjct: 275 ENIGKIDAKKRIQNSVETLLNESILTCI 302
Score = 124 (48.7 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 306 DPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ ++ +K+L YNK L E K + E++ ++N+GK D K+ ++ V+TL+ +I+ C+G
Sbjct: 245 ETLEDIKKLTTLYNKNLRNEMKKTSEEILLENIGKIDAKKRIQNSVETLLNESILTCIG 303
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 549 (198.3 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 101/129 (78%), Positives = 115/129 (89%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
+ DT+EQVYIS LALLK+LKHGRAGVPMEVMGLMLGE VDEYT+R++DVFAMPQ+G VS
Sbjct: 26 LADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVS 85
Query: 244 VEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAV 303
VEAVDPV+Q ML+ LK+TGR EMVVGWYHSHPGFGCWLSG D+NTQ+SFE L+ R + V
Sbjct: 86 VEAVDPVYQTNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGV 145
Query: 304 VVDPIQSVK 312
VVDPIQSVK
Sbjct: 146 VVDPIQSVK 154
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 79/148 (53%), Positives = 112/148 (75%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVID FRLINP++++LGQEPRQTTSN+G+L K ++ AL+HGLNR+YYSI INYRKNEL
Sbjct: 155 GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLNRNYYSIVINYRKNEL 214
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+ MLLNLHK W + L L D++E K ++ T+ D+ +L YNK L E K + E++ +
Sbjct: 215 EKNMLLNLHKDMWTNPLKLNDFHEQKKSSDETLEDIKKLTTLYNKNLRNEMKKTSEEILL 274
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+N+GK D K+ ++ V+TL+ +I+ C+
Sbjct: 275 ENIGKIDAKKRIQNSVETLLNESILTCI 302
Score = 124 (48.7 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 306 DPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ ++ +K+L YNK L E K + E++ ++N+GK D K+ ++ V+TL+ +I+ C+G
Sbjct: 245 ETLEDIKKLTTLYNKNLRNEMKKTSEEILLENIGKIDAKKRIQNSVETLLNESILTCIG 303
>POMBASE|SPAC31G5.13 [details] [associations]
symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IC] [GO:0046898 "response to
cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
NextBio:20804070 GO:GO:0071947 Uniprot:P41878
Length = 308
Score = 606 (218.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 121/157 (77%), Positives = 135/157 (85%)
Query: 159 NMERLL---RLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMG 215
+++RLL R+G+GM G D P+VD +E VYISSLALLKML+HGR G PMEVMG
Sbjct: 3 SLQRLLQGARMGTGMMG--------DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMG 54
Query: 216 LMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSH 275
LMLGEFVD++TVRV+DVFAMPQ+GTGVSVEAVDPVFQ M+DMLKQTGRPEMVVGWYHSH
Sbjct: 55 LMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSH 114
Query: 276 PGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
PGFGCWLS VDINTQQSFE L+ RAVAVVVDPIQSVK
Sbjct: 115 PGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVK 151
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 83/148 (56%), Positives = 111/148 (75%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLINP+ +++GQEPRQTTSNLGH+ K S+QALIHGL RHYYS+ INY+K EL
Sbjct: 152 GKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTEL 211
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E+ MLLNLHK+ W GL L+++N + N +++ M L++ Y + ++ E +SPEQL I
Sbjct: 212 EEIMLLNLHKQPWAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRI 271
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+ VGKQDPK+HL+ +V + NI L
Sbjct: 272 QYVGKQDPKKHLDAEVQKCIDNNISSML 299
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 34/104 (32%), Positives = 57/104 (54%)
Query: 260 KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYN 319
K+T E+++ H P W G+ + ++F + +E+ A I +K L++ Y
Sbjct: 207 KKTELEEIMLLNLHKQP----WAHGLLL---ENFNSAAEKNHA----SIDKMKSLSEQYT 255
Query: 320 KALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCL 363
+ ++ E +SPEQL I+ VGKQDPK+HL+ +V + NI L
Sbjct: 256 ERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSML 299
Score = 39 (18.8 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 308 IQS-VKELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRH 346
IQ+ + L +HY +K E++ + N+ KQ P H
Sbjct: 188 IQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQ-PWAH 226
>DICTYBASE|DDB_G0272566 [details] [associations]
symbol:psmD14 "putative multidrug resistance protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
Uniprot:Q86IJ1
Length = 306
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 119/187 (63%), Positives = 143/187 (76%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDG-PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLML 218
M R L G GL + ++D P+ DTAE ++ISSLALLKML+H RAGVP+EVMGLML
Sbjct: 1 MNRSLMSLLGREGLGEK--ITDATPLPDTAETIHISSLALLKMLQHARAGVPLEVMGLML 58
Query: 219 GEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF 278
GE +DEYT+RVIDVFAMPQ+GT VSVEA+DPVFQ KMLDMLKQTGR E+V+GWYHSHPGF
Sbjct: 59 GELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGF 118
Query: 279 GCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-ELAKHYNKALEEEEKMSPEQLAIKN 337
GCWLS VD+NTQQSFE L RAVAVVVDP+QSV+ ++ + ++ P Q+ N
Sbjct: 119 GCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPTAEPRQIT-SN 177
Query: 338 VGK-QDP 343
+G QDP
Sbjct: 178 LGHLQDP 184
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 87/148 (58%), Positives = 110/148 (74%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFR I + EPRQ TSNLGHLQ S+QALIHGLNR+YYSI+INYRKNEL
Sbjct: 153 GKVVIDAFRTIKTSPTA---EPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNEL 209
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
EQKMLLNLHKK W +GL + ++ H + NE +N++LEL K Y K++++E+K+ PE+ +
Sbjct: 210 EQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEV 269
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
VGK DPKRHL V TLM N+++ L
Sbjct: 270 SAVGKLDPKRHLISDVHTLMANNVVRVL 297
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W G+ ++ + E +E+ I ++ EL K Y K++++E+K+ PE+ + VGK
Sbjct: 222 WTEGLIVDKFDTHEQSNEKQ-------INNLLELTKQYQKSIQDEDKIEPEKKEVSAVGK 274
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
DPKRHL V TLM N+++ L
Sbjct: 275 LDPKRHLISDVHTLMANNVVRVL 297
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 118/153 (77%), Positives = 128/153 (83%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
MERL RL + A D DT E VYISS+ALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MERLQRLMMNSK-VGSADTGRD----DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLG 55
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
EFVD+YTV V+DVFAMPQ+GTGVSVEAVD VFQAKM+DMLKQTGR +MVVGWYHSHPGFG
Sbjct: 56 EFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFG 115
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
CWLS VD+NTQ+SFE L+ RAVAVVVDPIQSVK
Sbjct: 116 CWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVK 148
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 75/148 (50%), Positives = 103/148 (69%)
Query: 9 GKVVIDAFRLINPNMMVLGQEPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINYRKNEL 68
GKVVIDAFRLI+ ++ EPRQTTSN G L K ++QALIHGLNRHYYS++I+Y K
Sbjct: 149 GKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAK 208
Query: 69 EQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEEEEKMSPEQLAI 128
E KML+NLHK+ W GL + DY E + N M+++A+ Y+K +EEE++++ E+L
Sbjct: 209 ETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKT 268
Query: 129 KNVGKQDPKRHLEEKVDTLMTANIIQCL 156
+ VG+QDPK+HL E D + NI+ L
Sbjct: 269 RYVGRQDPKKHLSETADETLENNIVSVL 296
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/83 (33%), Positives = 49/83 (59%)
Query: 281 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVGK 340
W SG+ + +E E +A +S+ ++A+ Y+K +EEE++++ E+L + VG+
Sbjct: 221 WQSGLKM---YDYEEKEESNLAAT----KSMVKIAEQYSKRIEEEKELTEEELKTRYVGR 273
Query: 341 QDPKRHLEEKVDTLMTANIIQCL 363
QDPK+HL E D + NI+ L
Sbjct: 274 QDPKKHLSETADETLENNIVSVL 296
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 114/206 (55%), Positives = 140/206 (67%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RL+R M QA D P DT+E V ISSLALLKML+H R+G+P+EVMGLMLG
Sbjct: 1 MDRLIR-SLLMNQNKQATDKLDHP--DTSETVNISSLALLKMLRHARSGIPLEVMGLMLG 57
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
+FVD+YT+ V DVFAMPQ+GT V+VE+VDPV+Q K +D+LK GR E VVGWYHSHPGFG
Sbjct: 58 DFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFG 117
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVKELAKHYNKALEEEEKMSPEQLAIKNVG 339
CWLS VD+NTQQSFEAL RAVAVVVDPIQSVK L+ ++P L I+ +
Sbjct: 118 CWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVM-----LDAFRSVNPLNLQIRPLA 172
Query: 340 KQDPKRHLEEKVDTLMTANIIQCLGG 365
R + L ++I + G
Sbjct: 173 PTAEPRQTTSNLGHLTKPSLISVVHG 198
Score = 258 (95.9 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 60/155 (38%), Positives = 92/155 (59%)
Query: 9 GKVVIDAFRLINP-NMMV--LGQ--EPRQTTSNLGHLQKHSVQALIHGLNRHYYSISINY 63
GKV++DAFR +NP N+ + L EPRQTTSNLGHL K S+ +++HGL YYS+++ Y
Sbjct: 151 GKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGHLTKPSLISVVHGLGTKYYSLNVAY 210
Query: 64 RKNELEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEE------ 117
R EQKML+ L+KK+W D L++ Y+E K E + +L +NK ++E
Sbjct: 211 RMGSNEQKMLMCLNKKSWYDQLNMSTYSELEKKQEEKFKSINKLIAVFNKDIDEVKEKPI 270
Query: 118 EEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANI 152
+K Q +K GK + K+ L+ +L+ ++
Sbjct: 271 ADKKGKTQEEVKKFGKINAKQQLQMITSSLLNDSL 305
>MGI|MGI:1930765 [details] [associations]
symbol:Tmem115 "transmembrane protein 115" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] MGI:MGI:1930765 GO:GO:0016021 GO:GO:0005634
GO:GO:0005794 GO:GO:0001302 InterPro:IPR013861 Pfam:PF08551
CTD:11070 eggNOG:NOG251000 GeneTree:ENSGT00390000002470
HOGENOM:HOG000007827 HOVERGEN:HBG027575 OMA:YLFTVRI
OrthoDB:EOG4J1193 EMBL:AF134238 EMBL:BC009099 EMBL:BC019473
IPI:IPI00124661 RefSeq:NP_062678.1 UniGene:Mm.260153
ProteinModelPortal:Q9WUH1 STRING:Q9WUH1 PhosphoSite:Q9WUH1
PaxDb:Q9WUH1 PRIDE:Q9WUH1 Ensembl:ENSMUST00000010189 GeneID:56395
KEGG:mmu:56395 InParanoid:Q9WUH1 NextBio:312496 Bgee:Q9WUH1
CleanEx:MM_TMEM115 Genevestigator:Q9WUH1
GermOnline:ENSMUSG00000010045 Uniprot:Q9WUH1
Length = 350
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 92/211 (43%), Positives = 136/211 (64%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + L Y YM +FN LF +RIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGALAYLLTYMASFNLVYLFTIRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L +++ +P+L++ + +L L L+ S FG L S
Sbjct: 144 GVLVALKQTMGDCVVLRVPQVRVSV--VPMLLLALLLLLRLATLLQSPALASYGFGLLSS 201
Query: 483 WIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD P I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>UNIPROTKB|Q12893 [details] [associations]
symbol:TMEM115 "Transmembrane protein 115" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=NAS] GO:GO:0016021 GO:GO:0005634 GO:GO:0005794
GO:GO:0008285 EMBL:CH471055 GO:GO:0001302 EMBL:AC002481 EMBL:Z84492
InterPro:IPR013861 Pfam:PF08551 CTD:11070 eggNOG:NOG251000
HOGENOM:HOG000007827 HOVERGEN:HBG027575 OMA:YLFTVRI
OrthoDB:EOG4J1193 EMBL:U09584 EMBL:CR457020 EMBL:BC011948
EMBL:BC017367 IPI:IPI00170517 PIR:G01430 RefSeq:NP_008955.1
UniGene:Hs.91566 ProteinModelPortal:Q12893 STRING:Q12893
PhosphoSite:Q12893 DMDM:24638130 PaxDb:Q12893 PeptideAtlas:Q12893
PRIDE:Q12893 DNASU:11070 Ensembl:ENST00000266025 GeneID:11070
KEGG:hsa:11070 UCSC:uc003dan.1 GeneCards:GC03M050392
HGNC:HGNC:30055 HPA:CAB006319 HPA:HPA015497 MIM:607069
neXtProt:NX_Q12893 PharmGKB:PA143485636 InParanoid:Q12893
PhylomeDB:Q12893 GenomeRNAi:11070 NextBio:42086 Bgee:Q12893
CleanEx:HS_TMEM115 Genevestigator:Q12893 GermOnline:ENSG00000126062
Uniprot:Q12893
Length = 351
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 95/228 (41%), Positives = 143/228 (62%)
Query: 347 LEEKV-DTLMTANIIQCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFN 405
+E+ V D ++ + + G+L+EPLWG++E++ FF++VN+ V + Y YM +FN
Sbjct: 68 MEQHVWDVAISLTTV-VVAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFN 126
Query: 406 TDLLFFVRIHGLTGYISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIG 465
LF VRIHG G++ GVLVA+KQ M D V+L +++ +P+L++ + +L L
Sbjct: 127 LVYLFTVRIHGALGFLGGVLVALKQTMGDCVVLRVPQVRVSV--MPMLLLALLLLLRLAT 184
Query: 466 LVDSIRPTMTLFGTLVSWIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTI 525
L+ S FG L SW+YLRFYQ H+ G RGDMAD P I+QP + ++ N +
Sbjct: 185 LLQSPALASYGFGLLSSWVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLV 243
Query: 526 HEFLVRIGLCRKMVRKFDMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
H LV++ +C+K V+++D+ APSS ITI+LPG DP DAERR + K
Sbjct: 244 HSLLVKVKICQKTVKRYDVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>ZFIN|ZDB-GENE-050913-157 [details] [associations]
symbol:tmem115 "transmembrane protein 115"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA]
ZFIN:ZDB-GENE-050913-157 GO:GO:0016021 InterPro:IPR013861
Pfam:PF08551 CTD:11070 HOVERGEN:HBG027575 EMBL:BC097136
IPI:IPI00511985 RefSeq:NP_001028917.1 UniGene:Dr.78252
ProteinModelPortal:Q4V8Z5 PRIDE:Q4V8Z5 GeneID:619264
KEGG:dre:619264 InParanoid:Q4V8Z5 NextBio:20901481
ArrayExpress:Q4V8Z5 Bgee:Q4V8Z5 Uniprot:Q4V8Z5
Length = 361
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 94/221 (42%), Positives = 134/221 (60%)
Query: 355 MTANIIQCL-GGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVR 413
M NI + G+L+EPLWG++E++ FFA+VN+ + S L Y F Y TF+ D LF VR
Sbjct: 76 MAVNIATVMVAGRLLEPLWGALELLIFFAVVNVAAGLLSGLSYLFTYAATFDLDYLFAVR 135
Query: 414 IHGLTGYISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPT 473
++G ++ GVLVA+KQ D +L ++ + P L +L ++L L GL+D+ P
Sbjct: 136 VYGAPAFLGGVLVALKQTAGDTTVLRVPQVRL--KAAPALALLAIAVLRLAGLLDTSAPL 193
Query: 474 MTL-FGTLVSWIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRI 532
+G L W+YLRFYQ H+ G RGDM+D P +QP + +H LV+I
Sbjct: 194 AACGYGALSGWVYLRFYQRHSRG-RGDMSDHFAFASFFPEALQPAVGFAAGLVHAALVKI 252
Query: 533 GLCRKMVRKFDMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
+CRKMV+++D+ APSS ITI+LPG DP DAERR + K
Sbjct: 253 KICRKMVKRYDVG-APSS-ITISLPGTDPQDAERRRQLALK 291
>RGD|1310540 [details] [associations]
symbol:Tmem115 "transmembrane protein 115" species:10116 "Rattus
norvegicus" [GO:0001302 "replicative cell aging" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] RGD:1310540
GO:GO:0016021 GO:GO:0005634 GO:GO:0005794 GO:GO:0001302
EMBL:CH473954 InterPro:IPR013861 Pfam:PF08551 CTD:11070
GeneTree:ENSGT00390000002470 OMA:YLFTVRI OrthoDB:EOG4J1193
IPI:IPI00366712 RefSeq:NP_001102249.1 UniGene:Rn.7749
Ensembl:ENSRNOT00000032263 GeneID:363136 KEGG:rno:363136
UCSC:RGD:1310540 NextBio:682572 Uniprot:D3ZE59
Length = 350
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 91/211 (43%), Positives = 135/211 (63%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + Y YM +FN LF +RIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLFTIRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L +++ +P+L++ + +L L L+ S FG L S
Sbjct: 144 GVLVALKQTMGDCVVLRVPQVRVSV--VPMLLLALLLLLRLATLLQSPALASYGFGLLSS 201
Query: 483 WIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD P I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>UNIPROTKB|E2QWQ9 [details] [associations]
symbol:TMEM115 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
GO:GO:0005794 InterPro:IPR013861 Pfam:PF08551 CTD:11070
GeneTree:ENSGT00390000002470 OMA:YLFTVRI EMBL:AAEX03012220
RefSeq:XP_850145.1 Ensembl:ENSCAFT00000016810 GeneID:484758
KEGG:cfa:484758 Uniprot:E2QWQ9
Length = 351
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 91/211 (43%), Positives = 135/211 (63%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + Y YM +FN LF +RIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLFTIRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L +++ +P+L++ + +L L L+ S FG L S
Sbjct: 144 GVLVALKQTMGDCVVLRVPQVRVSV--VPMLLLGLLLLLRLATLLQSPALASYGFGLLSS 201
Query: 483 WIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD P I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>UNIPROTKB|A4FUB8 [details] [associations]
symbol:TMEM115 "Transmembrane protein 115" species:9913
"Bos taurus" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] GO:GO:0016021 GO:GO:0005634 GO:GO:0005794
InterPro:IPR013861 Pfam:PF08551 EMBL:BC114682 EMBL:BC140647
IPI:IPI00705100 RefSeq:NP_001076930.1 UniGene:Bt.62573
ProteinModelPortal:A4FUB8 STRING:A4FUB8 Ensembl:ENSBTAT00000003411
GeneID:532459 KEGG:bta:532459 CTD:11070 eggNOG:NOG251000
GeneTree:ENSGT00390000002470 HOGENOM:HOG000007827
HOVERGEN:HBG027575 InParanoid:A4FUB8 OMA:YLFTVRI OrthoDB:EOG4J1193
NextBio:20875702 Uniprot:A4FUB8
Length = 351
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 91/211 (43%), Positives = 135/211 (63%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + Y YM +FN LF VRIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLFTVRIHGALGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L +++ +P+L++ + +L L L+ S FG + S
Sbjct: 144 GVLVALKQTMGDCVVLRVPQVRVSV--VPMLLLGLLLLLRLATLLQSPALASYGFGLISS 201
Query: 483 WIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD P I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>UNIPROTKB|F1SJ20 [details] [associations]
symbol:TMEM115 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005794
InterPro:IPR013861 Pfam:PF08551 GeneTree:ENSGT00390000002470
OMA:YLFTVRI EMBL:CU861907 RefSeq:XP_003132275.3
Ensembl:ENSSSCT00000012491 GeneID:100517191 KEGG:ssc:100517191
Uniprot:F1SJ20
Length = 351
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 91/211 (43%), Positives = 135/211 (63%)
Query: 363 LGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYIS 422
+ G+L+EPLWG++E++ FF++VN+ V + Y YM +FN LF +RIHG G++
Sbjct: 84 VAGRLLEPLWGALELLIFFSVVNVSVGLLGAFAYLLTYMASFNLVYLFTIRIHGSLGFLG 143
Query: 423 GVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVS 482
GVLVA+KQ M D V+L +++ +P+L++ + +L L L+ S FG L S
Sbjct: 144 GVLVALKQTMGDCVVLRVPQVRVSV--VPMLLLGLLLLLRLATLLQSPALASYGFGLLSS 201
Query: 483 WIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKF 542
W+YLRFYQ H+ G RGDMAD P I+QP + ++ N +H LV++ +C+K V+++
Sbjct: 202 WVYLRFYQRHSRG-RGDMADHFAFATFFPEILQPVVGLLANLVHGLLVKVKICQKTVKRY 260
Query: 543 DMSVAPSSGITITLPGIDPNDAERRSSVYCK 573
D+ APSS ITI+LPG DP DAERR + K
Sbjct: 261 DVG-APSS-ITISLPGTDPQDAERRRQLALK 289
>UNIPROTKB|H9L111 [details] [associations]
symbol:H9L111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] InterPro:IPR013861 Pfam:PF08551
GeneTree:ENSGT00390000002470 EMBL:AADN02054088
Ensembl:ENSGALT00000029521 OMA:PDSINFL Uniprot:H9L111
Length = 258
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 91/203 (44%), Positives = 130/203 (64%)
Query: 365 GKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYISGV 424
G+L+EP WG++E++ FFA+V+ V + YF Y TF+ LF V IHG G+++GV
Sbjct: 60 GRLLEPRWGALELLVFFAVVHASVGLLGAAAYFLTYAATFHVAYLFDVHIHGGLGFLAGV 119
Query: 425 LVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTLFGTLVSWI 484
LVA+KQ M D +L +M + +P+L++L+ + L L L++S FG L SW+
Sbjct: 120 LVALKQTMGDSTVLRVPQVRM--KAVPVLLLLLLAALRLATLIESPALASYGFGLLSSWV 177
Query: 485 YLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRKFDM 544
YLRFYQ H+ G RGDM+D P I+QP + + N +H LV++ LCRK V+++D+
Sbjct: 178 YLRFYQRHSRG-RGDMSDHFAFATFFPEILQPAVGLAANLVHTLLVKVRLCRKTVKRYDV 236
Query: 545 SVAPSSGITITLPGIDPNDAERR 567
APSS ITI+LPG DP DAERR
Sbjct: 237 G-APSS-ITISLPGTDPQDAERR 257
>UNIPROTKB|C9JW37 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
HGNC:HGNC:16889 EMBL:AC009487 EMBL:AC009299 IPI:IPI00915790
ProteinModelPortal:C9JW37 SMR:C9JW37 STRING:C9JW37 PRIDE:C9JW37
Ensembl:ENST00000437630 ArrayExpress:C9JW37 Bgee:C9JW37
Uniprot:C9JW37
Length = 84
Score = 377 (137.8 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 75/85 (88%), Positives = 79/85 (92%)
Query: 160 MERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 219
M+RLLRLG GMPGL Q PP +D P VDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG
Sbjct: 1 MDRLLRLGGGMPGLGQGPP-TDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 59
Query: 220 EFVDEYTVRVIDVFAMPQTGTGVSV 244
EFVD+YTVRVIDVFAMPQ+GTGVSV
Sbjct: 60 EFVDDYTVRVIDVFAMPQSGTGVSV 84
>FB|FBgn0027053 [details] [associations]
symbol:CSN5 "COP9 complex homolog subunit 5" species:7227
"Drosophila melanogaster" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;IDA;TAS] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP;TAS]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007310 "oocyte
dorsal/ventral axis specification" evidence=IMP] [GO:0007314
"oocyte anterior/posterior axis specification" evidence=IMP]
[GO:0000338 "protein deneddylation" evidence=IMP] [GO:0019781
"NEDD8 activating enzyme activity" evidence=IMP] [GO:0048477
"oogenesis" evidence=TAS] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0032435 "negative regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0005737 GO:GO:0007095 GO:GO:0050821 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0007409 GO:GO:0008180
eggNOG:COG1310 GO:GO:0001751 GO:GO:0008347 GO:GO:0045787
GO:GO:0032435 GO:GO:0007314 GO:GO:0000338 GO:GO:0019781 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:AF129083 EMBL:AF132563 RefSeq:NP_477442.1 UniGene:Dm.1223
ProteinModelPortal:Q9XZ58 SMR:Q9XZ58 DIP:DIP-22022N IntAct:Q9XZ58
MINT:MINT-884235 STRING:Q9XZ58 PaxDb:Q9XZ58 PRIDE:Q9XZ58
EnsemblMetazoa:FBtr0083292 GeneID:42000 KEGG:dme:Dmel_CG14884
CTD:42000 FlyBase:FBgn0027053 InParanoid:Q9XZ58 OrthoDB:EOG4ZCRM3
PhylomeDB:Q9XZ58 ChiTaRS:COPS5 GenomeRNAi:42000 NextBio:826668
Bgee:Q9XZ58 GermOnline:CG14884 GO:GO:0007310 Uniprot:Q9XZ58
Length = 327
Score = 311 (114.5 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/125 (48%), Positives = 86/125 (68%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ + IS+LALLKM+ H R+G +EVMGLMLG+ V++ T+ V+D FA+P GT V A
Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQA 108
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ ++ K+ GR E VGWYHSHPG+GCWLSG+D++TQ + E VA+VVD
Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVD 168
Query: 307 PIQSV 311
P+++V
Sbjct: 169 PVRTV 173
>TAIR|locus:2017764 [details] [associations]
symbol:CSN5A "COP9 signalosome 5A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0010387 "signalosome
assembly" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0031347
"regulation of defense response" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0010093
GO:GO:0008180 eggNOG:COG1310 GO:GO:0031347 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 ProtClustDB:CLSN2681857
GO:GO:0010100 GO:GO:0010387 EMBL:AF087413 EMBL:AF395062
EMBL:AF042334 EMBL:AF000657 EMBL:AY087510 EMBL:BT003909
IPI:IPI00517251 PIR:C86363 PIR:T52180 RefSeq:NP_173705.1
UniGene:At.10441 ProteinModelPortal:Q8LAZ7 IntAct:Q8LAZ7
STRING:Q8LAZ7 MEROPS:M67.A01 PaxDb:Q8LAZ7 PRIDE:Q8LAZ7
EnsemblPlants:AT1G22920.1 GeneID:838899 KEGG:ath:AT1G22920
GeneFarm:4559 TAIR:At1g22920 InParanoid:Q8LAZ7 OMA:IFHYDDA
PhylomeDB:Q8LAZ7 Genevestigator:Q8LAZ7 Uniprot:Q8LAZ7
Length = 357
Score = 291 (107.5 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 61/141 (43%), Positives = 89/141 (63%)
Query: 173 LSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDV 232
+ Q P + P + ++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D
Sbjct: 43 IQQEKPWASDP--NYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGD-TIIVMDA 99
Query: 233 FAMPQTGTGVSVEAVDPVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQ 290
FA+P GT V A ++ + K GR E VVGWYHSHPG+GCWLSG+D++TQ
Sbjct: 100 FALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQ 159
Query: 291 QSFEALSERAVAVVVDPIQSV 311
+ E +AVV+DP ++V
Sbjct: 160 MLNQQYQEPFLAVVIDPTRTV 180
Score = 42 (19.8 bits), Expect = 3.9e-27, Sum P(2) = 3.9e-27
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 322 LEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLGGKLIEPLWGSMEMM 378
L E+ + + QLA G P H K D A I + +E + G M +
Sbjct: 273 LAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQV 329
>UNIPROTKB|Q5ZLC3 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
CTD:10987 HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:AADN02048438
EMBL:AADN02048434 EMBL:AADN02048433 EMBL:AADN02048414
EMBL:AADN02048415 EMBL:AADN02048416 EMBL:AADN02048417
EMBL:AADN02048432 EMBL:AADN02048427 EMBL:AADN02048399
EMBL:AADN02048400 EMBL:AADN02048401 EMBL:AADN02048402
EMBL:AADN02048403 EMBL:AADN02048404 EMBL:AADN02048405
EMBL:AADN02048406 EMBL:AADN02048407 EMBL:AADN02048408
EMBL:AADN02048409 EMBL:AADN02048410 EMBL:AADN02048411
EMBL:AADN02048412 EMBL:AADN02048413 EMBL:AADN02048418
EMBL:AADN02048419 EMBL:AADN02048420 EMBL:AADN02048421
EMBL:AADN02048422 EMBL:AADN02048423 EMBL:AADN02048424
EMBL:AADN02048425 EMBL:AADN02048426 EMBL:AADN02048428
EMBL:AADN02048429 EMBL:AADN02048430 EMBL:AADN02048431
EMBL:AADN02048435 EMBL:AADN02048436 EMBL:AADN02048437
EMBL:AADN02048439 EMBL:AADN02048440 EMBL:AADN02064737 EMBL:AJ719811
IPI:IPI00571765 RefSeq:NP_001034400.1 UniGene:Gga.49592
STRING:Q5ZLC3 Ensembl:ENSGALT00000023424 GeneID:426579
KEGG:gga:426579 InParanoid:Q5ZLC3 NextBio:20828097 Uniprot:Q5ZLC3
Length = 338
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 61 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 119
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 120 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 179
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 180 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 238
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 239 RKLLELLW 246
>UNIPROTKB|F1MBP8 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 KO:K09613 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 CTD:10987 EMBL:DAAA02038695
IPI:IPI00700780 RefSeq:NP_001179068.1 UniGene:Bt.9730
ProteinModelPortal:F1MBP8 Ensembl:ENSBTAT00000003609 GeneID:507179
KEGG:bta:507179 NextBio:20867939 Uniprot:F1MBP8
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>UNIPROTKB|E2QWE0 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0045944 GO:GO:0008237
GO:GO:0051726 GO:GO:0046328 GO:GO:0008180 GO:GO:0010388 KO:K09613
OMA:SAGKVCL GeneTree:ENSGT00550000074850 CTD:10987
EMBL:AAEX03015841 RefSeq:XP_535093.1 Ensembl:ENSCAFT00000011845
GeneID:477901 KEGG:cfa:477901 NextBio:20853308 Uniprot:E2QWE0
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>UNIPROTKB|Q92905 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000338 "protein
deneddylation" evidence=IMP] [GO:0008237 "metallopeptidase
activity" evidence=IMP] [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0003743 "translation initiation factor activity"
evidence=TAS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0045944 GO:GO:0006508
GO:GO:0008237 GO:GO:0051726 GO:GO:0003713 GO:GO:0006366
GO:GO:0003743 GO:GO:0046328 GO:GO:0008180 eggNOG:COG1310
Pathway_Interaction_DB:hif1apathway GO:GO:0005852 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD ChiTaRS:COPS5 EMBL:U65928
EMBL:U70734 EMBL:CR541678 EMBL:BC001187 EMBL:BC001859 EMBL:BC007272
EMBL:BX648542 EMBL:AY078082 IPI:IPI00009958 PIR:S71820
RefSeq:NP_006828.2 UniGene:Hs.491912 ProteinModelPortal:Q92905
DIP:DIP-34546N IntAct:Q92905 MINT:MINT-1188008 STRING:Q92905
PhosphoSite:Q92905 DMDM:55976562 REPRODUCTION-2DPAGE:IPI00009958
PaxDb:Q92905 PRIDE:Q92905 DNASU:10987 Ensembl:ENST00000357849
GeneID:10987 KEGG:hsa:10987 UCSC:uc003xxd.3 GeneCards:GC08M068005
HGNC:HGNC:2240 HPA:CAB004242 HPA:HPA004845 MIM:604850
neXtProt:NX_Q92905 PharmGKB:PA26757 InParanoid:Q92905
GenomeRNAi:10987 NextBio:41743 ArrayExpress:Q92905 Bgee:Q92905
CleanEx:HS_COPS5 Genevestigator:Q92905 GermOnline:ENSG00000121022
Uniprot:Q92905
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>UNIPROTKB|F2Z540 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 EMBL:CU582915 EMBL:JX570667
Ensembl:ENSSSCT00000006798 Uniprot:F2Z540
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>MGI|MGI:1349415 [details] [associations]
symbol:Cops5 "COP9 (constitutive photomorphogenic) homolog,
subunit 5 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000338 "protein deneddylation" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO] [GO:0010388
"cullin deneddylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046328 "regulation of JNK cascade" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349415 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0045944 GO:GO:0006508 GO:GO:0008237 GO:GO:0005667
GO:GO:0051726 GO:GO:0003713 GO:GO:0046328 GO:GO:0008180
eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:U70736 EMBL:AF068223
EMBL:AF065386 EMBL:AK012499 EMBL:AK146271 EMBL:AK151492
EMBL:BC046753 IPI:IPI00135087 RefSeq:NP_038743.1 UniGene:Mm.402384
ProteinModelPortal:O35864 STRING:O35864 PhosphoSite:O35864
REPRODUCTION-2DPAGE:O35864 PaxDb:O35864 PRIDE:O35864
Ensembl:ENSMUST00000027050 GeneID:26754 KEGG:mmu:26754
UCSC:uc007ahe.1 InParanoid:O35864 NextBio:304667 Bgee:O35864
Genevestigator:O35864 GermOnline:ENSMUSG00000025917 Uniprot:O35864
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>RGD|1310301 [details] [associations]
symbol:Cops5 "COP9 signalosome subunit 5" species:10116 "Rattus
norvegicus" [GO:0000338 "protein deneddylation" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008237 "metallopeptidase activity" evidence=IEA;ISO]
[GO:0010388 "cullin deneddylation" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046328 "regulation of JNK cascade"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1310301
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 EMBL:CH473984 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002
GeneTree:ENSGT00550000074850 CTD:10987 HOVERGEN:HBG051137
OrthoDB:EOG41NTMD EMBL:BC098736 IPI:IPI00366535
RefSeq:NP_001020866.1 UniGene:Rn.2243 STRING:Q4KM69
Ensembl:ENSRNOT00000008877 GeneID:312916 KEGG:rno:312916
UCSC:RGD:1310301 InParanoid:Q4KM69 NextBio:665375
Genevestigator:Q4KM69 Uniprot:Q4KM69
Length = 334
Score = 305 (112.4 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 74/188 (39%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 176 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 234
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 235 RKLLELLW 242
>DICTYBASE|DDB_G0284597 [details] [associations]
symbol:csn5 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0284597 GO:GO:0005737
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008283 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 EMBL:AAFI02000069
KO:K09613 OMA:SAGKVCL EMBL:DQ309433 RefSeq:XP_638491.1
ProteinModelPortal:Q54PF3 STRING:Q54PF3 MEROPS:M67.A13 PRIDE:Q54PF3
EnsemblProtists:DDB0233103 GeneID:8624671 KEGG:ddi:DDB_G0284597
ProtClustDB:CLSZ2497175 Uniprot:Q54PF3
Length = 332
Score = 304 (112.1 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 68/178 (38%), Positives = 106/178 (59%)
Query: 137 KRHLEEKVDTLMTANIIQCLDRNMERLLRLGSGM-PGLSQAPPVSDGPVVDTAEQVYISS 195
K + + T N IQ +D ++L + Q+ P S P + V IS+
Sbjct: 3 KNGAADALKTFELENNIQTIDH--DQLFKYDPQQYQQFLQSKPWSKDP--HYFKHVKISA 58
Query: 196 LALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEA-VDPV-FQA 253
+ALLKM+ H R+G +EVMG+++G+ V+ T+ ++D FA+P GT V A V+ +
Sbjct: 59 IALLKMVMHARSGGKLEVMGMLMGK-VENNTMIIMDSFALPVEGTETRVNAQVEAYEYMV 117
Query: 254 KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSV 311
+ L+++KQTGR E +GWYHSHPG+GCWLSG+D+ TQ + SE + +V+DP ++V
Sbjct: 118 EYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTV 175
>ZFIN|ZDB-GENE-040426-1686 [details] [associations]
symbol:cops5 "COP9 constitutive photomorphogenic
homolog subunit 5" species:7955 "Danio rerio" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040426-1686 GO:GO:0048471 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:BC059493 IPI:IPI00500950 RefSeq:NP_957019.1 UniGene:Dr.81074
ProteinModelPortal:Q6PC30 STRING:Q6PC30 PRIDE:Q6PC30
Ensembl:ENSDART00000080332 GeneID:393698 KEGG:dre:393698 CTD:10987
HOVERGEN:HBG051137 InParanoid:Q6PC30 OrthoDB:EOG41NTMD
NextBio:20814701 Bgee:Q6PC30 Uniprot:Q6PC30
Length = 334
Score = 303 (111.7 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 73/188 (38%), Positives = 106/188 (56%)
Query: 193 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ 252
+S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++
Sbjct: 55 LSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113
Query: 253 --AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQS 310
A ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP ++
Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173
Query: 311 VK----ELA--KHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDTLMTANIIQCLG 364
+ L + Y K + ++ E I +D H ++ L + L
Sbjct: 174 ISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYY-ALEVSYFKSSLD 232
Query: 365 GKLIEPLW 372
KL+E LW
Sbjct: 233 RKLLELLW 240
>TAIR|locus:2032288 [details] [associations]
symbol:CSN5B "COP9-signalosome 5B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0000338 "protein
deneddylation" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:2000082 "regulation of L-ascorbic acid
biosynthetic process" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 EMBL:AF087412 EMBL:AF395061
EMBL:AC016162 EMBL:AF411778 EMBL:AY124816 IPI:IPI00526805
PIR:H96736 PIR:T52042 RefSeq:NP_177279.1 UniGene:At.17922
UniGene:At.68950 ProteinModelPortal:Q9FVU9 IntAct:Q9FVU9
STRING:Q9FVU9 MEROPS:M67.A02 PRIDE:Q9FVU9 EnsemblPlants:AT1G71230.1
GeneID:843463 KEGG:ath:AT1G71230 TAIR:At1g71230
HOGENOM:HOG000116528 InParanoid:Q9FVU9 KO:K09613 OMA:SAGKVCL
PhylomeDB:Q9FVU9 ProtClustDB:CLSN2681857 Genevestigator:Q9FVU9
GermOnline:AT1G71230 GO:GO:0010100 GO:GO:0010387 Uniprot:Q9FVU9
Length = 358
Score = 293 (108.2 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 60/125 (48%), Positives = 84/125 (67%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D
Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115
Query: 249 PVFQ--AKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + E +AVV+D
Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175
Query: 307 PIQSV 311
P ++V
Sbjct: 176 PTRTV 180
>UNIPROTKB|G4N5N6 [details] [associations]
symbol:MGG_05274 "COP9 signalosome complex subunit 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:CM001233 KO:K09613 MEROPS:M67.002
RefSeq:XP_003712833.1 ProteinModelPortal:G4N5N6
EnsemblFungi:MGG_05274T0 GeneID:2675301 KEGG:mgr:MGG_05274
Uniprot:G4N5N6
Length = 344
Score = 292 (107.8 bits), Expect = 4.3e-25, P = 4.3e-25
Identities = 77/239 (32%), Positives = 125/239 (52%)
Query: 151 NIIQCLDRNMERLLRLGS-GMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGV 209
N ++ +D + + L + ++Q P + P + + V IS++AL+KM+ H R+G
Sbjct: 12 NNVKLVDPSRDALYNYDAESQKAINQQRPWAKDP--NYFKSVRISAIALIKMVMHARSGG 69
Query: 210 PMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV--FQAKMLDMLKQTGRPEM 267
+EVMG+M G +VD + V D F +P GT V A D + + L + ++ GR E
Sbjct: 70 SLEVMGMMQG-YVDGTALVVTDAFRLPVEGTETRVNAHDEANEYLVEYLRLSREQGRLEN 128
Query: 268 VVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK----ELA--KHYNKA 321
VVGWYHSHPG+GCWLSG+D++TQ + + VAVV+DP +++ E+ + Y +
Sbjct: 129 VVGWYHSHPGYGCWLSGIDVSTQFLQQQFMDPFVAVVIDPDRTISAGKVEIGAFRTYPEN 188
Query: 322 LEEEEKMSPEQLAIKNVGK-QDPKRHLEEKVDTLMTANIIQCLGGKLIEPLWGSMEMMT 379
+ EE + + + K +D H + L T + L L+E LW + T
Sbjct: 189 YKAEEASTSDGYQPVPLAKAEDFGAHAS-RYYALETEHFKSTLDAHLLELLWNKYWVQT 246
>WB|WBGene00000817 [details] [associations]
symbol:csn-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0008180 "signalosome" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017151 "DEAD/H-box RNA helicase binding" evidence=IPI]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0031672 "A band" evidence=IDA]
[GO:0000338 "protein deneddylation" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0009792
GO:GO:0040007 GO:GO:0030154 GO:GO:0008406 GO:GO:0002119
GO:GO:0046872 GO:GO:0006508 GO:GO:0048477 GO:GO:0008237
GO:GO:0000910 GO:GO:0040035 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA
EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 285 (105.4 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 54/125 (43%), Positives = 82/125 (65%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V A
Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112
Query: 249 PVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + +M GR E VVGWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 307 PIQSV 311
P++++
Sbjct: 173 PLRTM 177
>UNIPROTKB|P91001 [details] [associations]
symbol:csn-5 "COP9 signalosome complex subunit 5"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0009792 GO:GO:0040007 GO:GO:0030154 GO:GO:0008406
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0048477
GO:GO:0008237 GO:GO:0000910 GO:GO:0040035 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613
OMA:IFHYDDA EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 285 (105.4 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 54/125 (43%), Positives = 82/125 (65%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V A
Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112
Query: 249 PVFQAKML--DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
++ + +M GR E VVGWYHSHPG+GCWLSG+D++TQ + E VA+V+D
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172
Query: 307 PIQSV 311
P++++
Sbjct: 173 PLRTM 177
>ASPGD|ASPL0000041877 [details] [associations]
symbol:csnE species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0008180
"signalosome" evidence=ISS;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=TAS] [GO:0010388 "cullin deneddylation"
evidence=TAS] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0045116
"protein neddylation" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 GO:GO:0046872 EMBL:BN001307
GO:GO:0006508 GO:GO:0008237 EMBL:AACD01000032 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL
EMBL:AY126455 RefSeq:XP_659733.1 ProteinModelPortal:Q5BBF1
STRING:Q5BBF1 EnsemblFungi:CADANIAT00008806 GeneID:2875469
KEGG:ani:AN2129.2 OrthoDB:EOG4HDX37 Uniprot:Q5BBF1
Length = 335
Score = 280 (103.6 bits), Expect = 8.8e-24, P = 8.8e-24
Identities = 65/164 (39%), Positives = 91/164 (55%)
Query: 151 NIIQCLDRNMERLLRLGSGMPG-LSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGV 209
N + +D + L R LS P + P + V IS++ALLKM+ H R+G
Sbjct: 12 NAVTLIDPQRDSLYRYDEETHKYLSDTRPWTKDP--HYFKSVRISAVALLKMVMHARSGG 69
Query: 210 PMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV--FQAKMLDMLKQTGRPEM 267
+EVMGLM G ++ T V D F +P GT V A D + L ++ GR E
Sbjct: 70 SLEVMGLMQG-YILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMEN 128
Query: 268 VVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSV 311
VGWYHSHPG+GCWLSG+D++TQ + +S VAVV+DP +++
Sbjct: 129 AVGWYHSHPGYGCWLSGIDVSTQD-MQQMSGPFVAVVIDPERTI 171
>UNIPROTKB|E5RHF2 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0051726
GO:GO:0008180 ChiTaRS:COPS5 HGNC:HGNC:2240 EMBL:AC109335
EMBL:AC110998 IPI:IPI00985306 ProteinModelPortal:E5RHF2 SMR:E5RHF2
Ensembl:ENST00000518747 ArrayExpress:E5RHF2 Bgee:E5RHF2
Uniprot:E5RHF2
Length = 151
Score = 274 (101.5 bits), Expect = 4.0e-23, P = 4.0e-23
Identities = 53/113 (46%), Positives = 75/113 (66%)
Query: 201 MLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQ--AKMLDM 258
M+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V A ++ A ++
Sbjct: 1 MVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIEN 59
Query: 259 LKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSV 311
KQ GR E +GWYHSHPG+GCWLSG+D++TQ + E VAVV+DP +++
Sbjct: 60 AKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTI 112
>POMBASE|SPAC1687.13c [details] [associations]
symbol:csn5 "COP9/signalosome complex subunit Csn5"
species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC1687.13c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0008180 eggNOG:COG1310 GO:GO:0004843 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA MEROPS:M67.002
OrthoDB:EOG4HDX37 PIR:T37756 RefSeq:NP_593131.1
ProteinModelPortal:O94454 STRING:O94454 EnsemblFungi:SPAC1687.13c.1
GeneID:2541529 KEGG:spo:SPAC1687.13c NextBio:20802626
Uniprot:O94454
Length = 299
Score = 266 (98.7 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 54/124 (43%), Positives = 81/124 (65%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V IS++ALLKML+H G+P+EVMG + G+ V+ ++ ++D FA+P GT V A +
Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEA 93
Query: 251 --FQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+ + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + + VAVV+DP
Sbjct: 94 QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPK 153
Query: 309 QSVK 312
+S++
Sbjct: 154 RSLE 157
>DICTYBASE|DDB_G0278061 [details] [associations]
symbol:tmem115 "transmembrane protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA]
dictyBase:DDB_G0278061 GO:GO:0016021 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 InterPro:IPR013861 Pfam:PF08551 eggNOG:NOG251000
OMA:PEHNIVL RefSeq:XP_642097.1 ProteinModelPortal:Q54YV5
EnsemblProtists:DDB0304374 GeneID:8621308 KEGG:ddi:DDB_G0278061
ProtClustDB:CLSZ2430750 Uniprot:Q54YV5
Length = 288
Score = 263 (97.6 bits), Expect = 6.2e-22, P = 6.2e-22
Identities = 67/221 (30%), Positives = 113/221 (51%)
Query: 358 NIIQCLG-GKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHG 416
NI+ L GK +EP+WGS E + F +V ++ S F+ F +M DL+ + G
Sbjct: 32 NIVALLFIGKYLEPIWGSREFIKFILVVIFFSSLCSFFFFVFKFMFFGGIDLIMKANVCG 91
Query: 417 LTGYISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILW-LIGLVDSIRPTMT 475
+G I+ VA+KQ++ + N L K+ + IP ++IL I++ IG D T+
Sbjct: 92 FSGVIAAFSVALKQLITEQEF-NFFLIKIRAKWIPFILILFRVIVFSFIGFQDRSF-TLV 149
Query: 476 LFGTLVSWIYLRFYQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLC 535
++G ++WIYLRFYQ + G +GD+ + P +Q PI V+ N + + L ++ +C
Sbjct: 150 IYGVFIAWIYLRFYQVKS-GVKGDLNESFSFYTFFPDPVQAPIKVISNIVFKILCKLSIC 208
Query: 536 RKMVRKFDMSVAPSSG---ITITLPGIDPNDAERRSSVYCK 573
R + S+ P++ I + D ERR ++ K
Sbjct: 209 SSS-RFSNQSILPTTNNNNINNNDDSYNVADMERRRALAVK 248
>WB|WBGene00008687 [details] [associations]
symbol:F11A10.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z68297
InterPro:IPR013861 Pfam:PF08551 eggNOG:NOG251000
GeneTree:ENSGT00390000002470 GeneID:178149 KEGG:cel:CELE_F11A10.6
CTD:178149 PIR:T20737 RefSeq:NP_001255618.1
ProteinModelPortal:Q9U3K1 PaxDb:Q9U3K1 EnsemblMetazoa:F11A10.6a
UCSC:F11A10.6 WormBase:F11A10.6a HOGENOM:HOG000017900
InParanoid:Q9U3K1 OMA:VCFRTLA NextBio:899922 ArrayExpress:Q9U3K1
Uniprot:Q9U3K1
Length = 356
Score = 231 (86.4 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 64/230 (27%), Positives = 110/230 (47%)
Query: 351 VDTLMTANIIQCL--GGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDL 408
+D L T + CL G L+ + ++ +AI GV + + +L F++
Sbjct: 77 LDVLWT---VWCLHFGTNLVRLNNTNESLLKLYAITQ-GVTTFVIVVFAYLTYILFDSIK 132
Query: 409 LFFVR-IHGLTGYISGVLVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLV 467
F++ + G+T + V+V +KQ +PD ++L T LG++ ++P L I ++ IL L
Sbjct: 133 FFYIEPLVGMTPICASVMVLMKQFLPDTIVLATPLGRIKYAHLPFLAIFVSFILALTKFT 192
Query: 468 DSIRPTMTLFGTLVSWIYLRFYQYH-TNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIH 526
+ G VSW YLRFY+ H T+ GD ++ P+ Q ++
Sbjct: 193 YFVSFLQITIGVQVSWTYLRFYKPHETDEIYGDGSEHFTWASLFPSRTQLFFTLIGKVCF 252
Query: 527 EFLVRIGLCRKMVRKFDMSVAPSSGITITLPGIDPN--DAERRSSVYCKE 574
L R+G+C++ VR D+ S + I LP ++ + D+ERR KE
Sbjct: 253 RTLARMGVCKRQVRHVDLHSLQSGSVGINLPALENSAKDSERRRQKALKE 302
>TAIR|locus:2077377 [details] [associations]
symbol:AT3G07950 "AT3G07950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] GO:GO:0005794 EMBL:CP002686
InterPro:IPR013861 Pfam:PF08551 EMBL:AY085112 EMBL:BT002055
EMBL:BT008814 IPI:IPI00516727 RefSeq:NP_566326.1 UniGene:At.27668
ProteinModelPortal:Q8LF05 IntAct:Q8LF05 STRING:Q8LF05 PRIDE:Q8LF05
EnsemblPlants:AT3G07950.1 GeneID:819986 KEGG:ath:AT3G07950
TAIR:At3g07950 InParanoid:Q8LF05 OMA:LKIKAKW PhylomeDB:Q8LF05
ProtClustDB:CLSN2688165 ArrayExpress:Q8LF05 Genevestigator:Q8LF05
Uniprot:Q8LF05
Length = 304
Score = 220 (82.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 66/206 (32%), Positives = 99/206 (48%)
Query: 365 GKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGLTGYISGV 424
GK +EP+WGS E + F +VN + + LY T ++ ++ G G ++G+
Sbjct: 78 GKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYIT-RLEVYLYMPFAGFHGVLAGL 136
Query: 425 LVAVKQIMPDHVILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIR--PTMTLFGTLVS 482
LV +KQI+PD IL L K+ + +P ++LI SI +DS PT+ +FGT +
Sbjct: 137 LVGIKQIIPDQEIL---LLKIKAKWLPS-IMLILSIASSFFTLDSAAYLPTL-IFGTYMG 191
Query: 483 WIYLRFYQYHTNGT-RGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLCRKMVRK 541
W+YLR+ Q RGD +D P +++P I + H L G
Sbjct: 192 WLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLC--GRSNATSED 249
Query: 542 FDMSVAPSSGITITLPGIDPNDAERR 567
D S +SG LPG D +A RR
Sbjct: 250 HDYS---TSGAP--LPGSDSAEASRR 270
>ASPGD|ASPL0000017304 [details] [associations]
symbol:AN3692 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030137 "COPI-coated vesicle" evidence=IEA]
EMBL:BN001302 EMBL:AACD01000061 eggNOG:COG0705 OrthoDB:EOG4CNV1Q
InterPro:IPR013861 Pfam:PF08551 RefSeq:XP_661296.1
ProteinModelPortal:Q5B6Y8 EnsemblFungi:CADANIAT00005035
GeneID:2873117 KEGG:ani:AN3692.2 HOGENOM:HOG000216618 OMA:FCGRSAR
Uniprot:Q5B6Y8
Length = 405
Score = 184 (69.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 402 CTFNTD--LLFFVRIHGLTGYISGVLVAVKQIMPDHVI-LNTGLGKMTNRNIPLLVILIA 458
CTF D L +I G + LVA KQ++P+H + + GL KM ++ P + +L+
Sbjct: 160 CTFPADSALSSVTQICGGISIQASFLVAFKQLVPEHTVTIFKGLVKMRVKHFPAVFLLLN 219
Query: 459 SILWLIGLVDSIRPTMTLFGTLVSWIYLRFYQYHTN---------GTRGDMADXXXXXXX 509
++ +I + + T+ FG + SW YLRFY+ + G +GD ++
Sbjct: 220 TLSGII-VGTRVAATLAWFGLITSWTYLRFYKRQPDLTGTSTDGVGIKGDASETFAFKCL 278
Query: 510 XPTIIQPPIAVVCNTIHEFLVRIGLC 535
P IQPPI +V +TI+ FLV + +C
Sbjct: 279 FPDKIQPPIGLVSDTIYSFLVSLKIC 304
Score = 56 (24.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 347 LEEKVDTLMTANIIQCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLY 400
+E+ + T++ GGK +E WGS E F IV I + + + +L+
Sbjct: 69 VEQNIFTVLLNLATLFYGGKYLERAWGSREFTKF--IVTIALVPNVVIVPCYLF 120
>SGD|S000002375 [details] [associations]
symbol:RRI1 "Catalytic subunit of the COP9 signalosome (CSN)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0010388
"cullin deneddylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;IDA] [GO:0000754 "adaptation of signaling pathway by
response to pheromone involved in conjugation with cellular fusion"
evidence=IMP] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IMP] [GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 SGD:S000002375
GO:GO:0005737 GO:GO:0046872 GO:GO:0006508 EMBL:BK006938
GO:GO:0004222 EMBL:X99000 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000754 GO:GO:0010388 KO:K09613 MEROPS:M67.002
GeneTree:ENSGT00550000074850 OrthoDB:EOG4HDX37 EMBL:Z74264
PIR:S67775 RefSeq:NP_010065.2 ProteinModelPortal:Q12468
DIP:DIP-1809N IntAct:Q12468 MINT:MINT-411234 STRING:Q12468
EnsemblFungi:YDL216C GeneID:851310 KEGG:sce:YDL216C
HOGENOM:HOG000112018 OMA:YYELETI NextBio:968331
Genevestigator:Q12468 GermOnline:YDL216C Uniprot:Q12468
Length = 440
Score = 190 (71.9 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 46/135 (34%), Positives = 75/135 (55%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEA-VDP 249
V IS L+ K+ + G +E+MG+++G F + + V+D F +P GT V A ++
Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMG-FTLKDNIVVMDCFNLPVVGTETRVNAQLES 129
Query: 250 V-FQAKMLDMLKQ-----TGRPEM-----VVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
+ + +D + GR VVGW+HSHPG+ CWLS +DI TQ + +
Sbjct: 130 YEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQD 189
Query: 299 RAVAVVVDPIQSVKE 313
VA+VVDP++S+++
Sbjct: 190 PYVAIVVDPLKSLED 204
>UNIPROTKB|Q5PPY6 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 KO:K03247
HAMAP:MF_03007 CTD:8667 EMBL:BC087438 RefSeq:NP_001088779.1
UniGene:Xl.7704 GeneID:496043 KEGG:xla:496043
Xenbase:XB-GENE-958120 Uniprot:Q5PPY6
Length = 334
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 54/171 (31%), Positives = 93/171 (54%)
Query: 183 PVVDTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-T 238
P+ +TA +QV I L +LK++KH + G EV+ G++LG VD+ + + + F PQ T
Sbjct: 12 PIAETAVKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDD-RLEITNCFPFPQHT 70
Query: 239 GTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSE 298
V + V +Q +M+ L+ + VGWY S +G ++S +++Q S++ E
Sbjct: 71 EDDVDFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIE 127
Query: 299 RAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQD 342
+V ++ DPI++ + L+ K Y K +E +E+ S E L NV +D
Sbjct: 128 ESVVLIYDPIKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYED 178
>RGD|1588543 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO;ISS]
[GO:0010165 "response to X-ray" evidence=IEA;ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA;ISO] [GO:0031572 "G2 DNA
damage checkpoint" evidence=ISO;ISS] [GO:0031593 "polyubiquitin
binding" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO;ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO;ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] [GO:0070552 "BRISC complex" evidence=ISO;ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1588543
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 EMBL:CH474092 EMBL:BC166833
IPI:IPI00197234 RefSeq:NP_001120772.1 UniGene:Rn.52727
ProteinModelPortal:B2RYM5 PRIDE:B2RYM5 GeneID:316794
KEGG:rno:316794 NextBio:671241 Genevestigator:B2RYM5 Uniprot:B2RYM5
Length = 291
Score = 117 (46.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 79 (32.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 183 PVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGV 242
PVV + V++ S A L L H + EVMGL +GE D+ VR FA +
Sbjct: 4 PVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--VRSESKFAHAGSDVCT 61
Query: 243 SVEAVDPV 250
E VD +
Sbjct: 62 VPEKVDSI 69
>UNIPROTKB|Q6P381 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 HAMAP:MF_03007
CTD:8667 EMBL:BC064151 RefSeq:NP_989359.1 UniGene:Str.1956
ProteinModelPortal:Q6P381 STRING:Q6P381 GeneID:394989
KEGG:xtr:394989 Xenbase:XB-GENE-958115 InParanoid:Q6P381
OrthoDB:EOG4VQ9PV Uniprot:Q6P381
Length = 335
Score = 153 (58.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 57/195 (29%), Positives = 102/195 (52%)
Query: 184 VVDTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TG 239
V +TA +QV I + +LK++KH + G EV+ G++LG VD+ + + + F PQ T
Sbjct: 14 VAETAVKQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDD-RLEITNCFPFPQHTE 72
Query: 240 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSER 299
V + V +Q +M+ L+ + VGWY S +G ++S +++Q S++ E
Sbjct: 73 DDVDFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIEE 129
Query: 300 AVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQDPKRHLEEKVD 352
+V ++ DPI++ + L+ K Y K +E +E+ S E L N+ +D EE
Sbjct: 130 SVVLIYDPIKTGQGSLSLKAYRLTPKLMEVCKEKDFSAEGLKKANIAFEDM---FEEVPI 186
Query: 353 TLMTANIIQCLGGKL 367
+ +++I L +L
Sbjct: 187 IIKNSHLINVLAWEL 201
>UNIPROTKB|Q5R9L6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 HOGENOM:HOG000007866 EMBL:CR859371 RefSeq:NP_001125907.1
UniGene:Pab.3487 ProteinModelPortal:Q5R9L6 PRIDE:Q5R9L6
GeneID:100172840 KEGG:pon:100172840 Uniprot:Q5R9L6
Length = 247
Score = 117 (46.2 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 75 (31.5 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 24/67 (35%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ R FA T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDAV 69
>UNIPROTKB|B5RI54 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8030 "Salmo salar" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 HAMAP:MF_03007
EMBL:BT043978 UniGene:Ssa.31091 Uniprot:B5RI54
Length = 344
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/202 (28%), Positives = 106/202 (52%)
Query: 180 SDGPVVDT-AEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMP 236
S G +D+ +Q+ I L +LKM+KH + G EV+ G++LG V++ + + + F P
Sbjct: 19 SPGATLDSPVKQIQIEGLVVLKMIKHYQEEGQGSEVVQGVLLGLVVED-RLEITNCFPFP 77
Query: 237 Q-TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEA 295
Q T + V +Q +M+ L+ + VGWY S +G ++S +++Q S++
Sbjct: 78 QHTEDDADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALLDSQFSYQH 134
Query: 296 LSERAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQDPKRHLE 348
E +V ++ DPI++ + L+ K Y K +E +E+ S E L +G + H+
Sbjct: 135 AIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKAMIGFE----HMF 190
Query: 349 EKVDTLM-TANIIQCLGGKLIE 369
E+V ++ +++I L +L E
Sbjct: 191 EEVPIVIKNSHLINVLMWELEE 212
>UNIPROTKB|Q5ZLE6 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9031 "Gallus gallus" [GO:0006413 "translational
initiation" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:AJ719788 IPI:IPI00592172
RefSeq:NP_001026122.1 UniGene:Gga.4721 STRING:Q5ZLE6 PRIDE:Q5ZLE6
Ensembl:ENSGALT00000025971 GeneID:420288 KEGG:gga:420288
InParanoid:Q5ZLE6 NextBio:20823227 Uniprot:Q5ZLE6
Length = 348
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/190 (28%), Positives = 94/190 (49%)
Query: 167 GSGMPGLSQAPPVSDGPVVDTAE----QVYISSLALLKMLKHGRA-GVPMEVM-GLMLGE 220
GSG G G T + QV I L +LK++KH + G EV+ G++LG
Sbjct: 7 GSGAAGGGFGASKGKGKAATTGDSAVKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGL 66
Query: 221 FVDEYTVRVIDVFAMPQ-TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFG 279
VD+ + + + F PQ T + V +Q +M+ L+ + VGWY S +G
Sbjct: 67 VVDD-RLEITNCFPFPQHTEDDADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYG 122
Query: 280 CWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQ 332
+++ +++Q S++ E +V ++ DPI++ + L+ K Y K +E +E+ SPE
Sbjct: 123 SFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEA 182
Query: 333 LAIKNVGKQD 342
L N+ ++
Sbjct: 183 LKKANIAYEN 192
>UNIPROTKB|B5FY35 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:59729 "Taeniopygia guttata" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:DQ213760 RefSeq:NP_001232560.1
UniGene:Tgu.10677 STRING:B5FY35 PRIDE:B5FY35 GeneID:100190645
KEGG:tgu:100190645 Uniprot:B5FY35
Length = 348
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/168 (29%), Positives = 91/168 (54%)
Query: 186 DTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TGTG 241
D+A +QV I L +LK++KH + G EV+ G++LG VD+ + + + F PQ T
Sbjct: 29 DSAVKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDD-RLEITNCFPFPQHTEDD 87
Query: 242 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
+ V +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V
Sbjct: 88 ADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESV 144
Query: 302 AVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQD 342
++ DPI++ + L+ K Y K +E +E+ SPE L N+ ++
Sbjct: 145 VLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYEN 192
>CGD|CAL0001243 [details] [associations]
symbol:orf19.3763 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0001243 InterPro:IPR013861 Pfam:PF08551 EMBL:AACQ01000238
EMBL:AACQ01000237 RefSeq:XP_710780.1 RefSeq:XP_710793.1
ProteinModelPortal:Q59M24 GeneID:3647608 GeneID:3647616
KEGG:cal:CaO19.11247 KEGG:cal:CaO19.3763 eggNOG:NOG291335
Uniprot:Q59M24
Length = 459
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 347 LEEKVDTLMTANIIQCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNT 406
+EE L + I+ GK +E +WGS E F I+N V IS+ + Y + + +F
Sbjct: 106 IEENFIELFISFILIFYLGKYLETIWGSKEFSKFI-IIN--VLISNLIIYIYYNLKSFIV 162
Query: 407 DL----LFFVRIHGLTGYISGVLVAVKQIMPDH-VILNTGLGKMTNRNIPLLVILIASIL 461
+L L V + ++ I G+++A+KQ +P H +I G + +P L IL+ IL
Sbjct: 163 ELTDENLPPVILSSMSINI-GLIIAMKQRIPKHYLIFFKGNLRFKVTYLPFLTILLTWIL 221
Query: 462 WLIGLVDSIRPTMTLFGTLVSWIYLRFYQYHTN 494
L+ I M++ G +VSW YLRF++ N
Sbjct: 222 SLLSEEFYILFVMSIVGFIVSWTYLRFFKTGAN 254
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 489 YQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLC-RKMVRKFD 543
+ + +GD ++ P + PI + N I E LV L R+ + +D
Sbjct: 309 FSLDNDSLKGDRSEQFALYTFFPYPLSIPIKFIANFIFEILVDHKLLNRRDFKNYD 364
>UNIPROTKB|Q59M24 [details] [associations]
symbol:CaO19.11247 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0001243 InterPro:IPR013861 Pfam:PF08551 EMBL:AACQ01000238
EMBL:AACQ01000237 RefSeq:XP_710780.1 RefSeq:XP_710793.1
ProteinModelPortal:Q59M24 GeneID:3647608 GeneID:3647616
KEGG:cal:CaO19.11247 KEGG:cal:CaO19.3763 eggNOG:NOG291335
Uniprot:Q59M24
Length = 459
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 347 LEEKVDTLMTANIIQCLGGKLIEPLWGSMEMMTFFAIVNIGVAISSTLFYFFLYMCTFNT 406
+EE L + I+ GK +E +WGS E F I+N V IS+ + Y + + +F
Sbjct: 106 IEENFIELFISFILIFYLGKYLETIWGSKEFSKFI-IIN--VLISNLIIYIYYNLKSFIV 162
Query: 407 DL----LFFVRIHGLTGYISGVLVAVKQIMPDH-VILNTGLGKMTNRNIPLLVILIASIL 461
+L L V + ++ I G+++A+KQ +P H +I G + +P L IL+ IL
Sbjct: 163 ELTDENLPPVILSSMSINI-GLIIAMKQRIPKHYLIFFKGNLRFKVTYLPFLTILLTWIL 221
Query: 462 WLIGLVDSIRPTMTLFGTLVSWIYLRFYQYHTN 494
L+ I M++ G +VSW YLRF++ N
Sbjct: 222 SLLSEEFYILFVMSIVGFIVSWTYLRFFKTGAN 254
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 489 YQYHTNGTRGDMADXXXXXXXXPTIIQPPIAVVCNTIHEFLVRIGLC-RKMVRKFD 543
+ + +GD ++ P + PI + N I E LV L R+ + +D
Sbjct: 309 FSLDNDSLKGDRSEQFALYTFFPYPLSIPIKFIANFIFEILVDHKLLNRRDFKNYD 364
>UNIPROTKB|B5X8M4 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8030 "Salmo salar" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 GO:GO:0070537 MEROPS:M67.004 CTD:79184
EMBL:BT047393 RefSeq:NP_001134356.1 UniGene:Ssa.10060
ProteinModelPortal:B5X8M4 GeneID:100195855 Uniprot:B5X8M4
Length = 260
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 37/118 (31%), Positives = 56/118 (47%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPV 250
V++ S A L + H + EVMGL +GE V + V + ++ + P
Sbjct: 6 VHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPE 65
Query: 251 ---FQAKMLDMLKQ-TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
A + L + TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 66 QLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 123
>ZFIN|ZDB-GENE-051030-42 [details] [associations]
symbol:eif3hb "eukaryotic translation initiation
factor 3, subunit H, b" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA;ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-051030-42 GO:GO:0007420 GO:GO:0007507 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF HAMAP:MF_03007
EMBL:BC086809 EMBL:BC107824 IPI:IPI00655366 RefSeq:NP_001030341.1
UniGene:Dr.86151 STRING:Q5PR67 PRIDE:Q5PR67 GeneID:567151
KEGG:dre:567151 CTD:567151 NextBio:20888545 Uniprot:Q5PR67
Length = 333
Score = 149 (57.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/201 (27%), Positives = 106/201 (52%)
Query: 181 DGPVVDT-AEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ 237
+G +DT +Q+ I L ++K++KH + G EV+ G++LG V++ + + + F PQ
Sbjct: 9 NGKTLDTPVKQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQ-LEITNCFPFPQ 67
Query: 238 -TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL 296
T + V +Q +M+ L+ + VGWY S +G ++S +++Q S++
Sbjct: 68 HTEDDADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQSTL-YGSFVSRALLDSQFSYQHA 124
Query: 297 SERAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQDPKRHLEE 349
E +V ++ DPI++ + L K Y K +E +E+ S E L +VG + H+ E
Sbjct: 125 IEESVVLIYDPIKTAQGSLCLKAYRLTPKLMEICKEKDFSSEGLKKASVGYE----HMFE 180
Query: 350 KVDTLM-TANIIQCLGGKLIE 369
+V ++ +++I L +L E
Sbjct: 181 EVPIVIKNSHLINVLLWELEE 201
>UNIPROTKB|P46736 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IDA] [GO:0070552 "BRISC complex" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0031572 "G2 DNA
damage checkpoint" evidence=IMP] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IMP;IDA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IMP]
[GO:0008237 "metallopeptidase activity" evidence=IMP] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0000151 "ubiquitin ligase
complex" evidence=IDA] [GO:0010165 "response to X-ray"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IDA]
[GO:0050790 "regulation of catalytic activity" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0030234
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509 EMBL:X64643
EMBL:S68015 EMBL:AY438030 EMBL:AK298886 EMBL:AK299194 EMBL:AK313544
EMBL:BX293995 EMBL:BX470111 EMBL:BC002999 EMBL:BC006540
IPI:IPI00853631 IPI:IPI00871617 IPI:IPI00936224 IPI:IPI00939471
IPI:IPI01010909 PIR:I38167 RefSeq:NP_001018065.1
RefSeq:NP_001229569.1 RefSeq:NP_077308.1 UniGene:Hs.558537
ProteinModelPortal:P46736 DIP:DIP-48719N IntAct:P46736
MINT:MINT-1475401 STRING:P46736 PhosphoSite:P46736 DMDM:20532383
PaxDb:P46736 PRIDE:P46736 DNASU:79184 Ensembl:ENST00000330045
Ensembl:ENST00000340647 Ensembl:ENST00000369459
Ensembl:ENST00000369462 Ensembl:ENST00000399026
Ensembl:ENST00000411985 GeneID:79184 KEGG:hsa:79184 UCSC:uc004fna.3
UCSC:uc004fnb.3 UCSC:uc011mzy.2 GeneCards:GC0XP154299
HGNC:HGNC:24185 MIM:300617 neXtProt:NX_P46736 Orphanet:280679
PharmGKB:PA134922847 HOVERGEN:HBG002142 GenomeRNAi:79184
NextBio:68176 ArrayExpress:P46736 Bgee:P46736 CleanEx:HS_BRCC3
Genevestigator:P46736 GermOnline:ENSG00000185515 GO:GO:0000152
Uniprot:P46736
Length = 316
Score = 117 (46.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 75 (31.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 24/67 (35%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ R FA T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDAV 69
>UNIPROTKB|B0KWU8 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9483 "Callithrix jacchus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 MEROPS:M67.004 EMBL:DP000587 Uniprot:B0KWU8
Length = 316
Score = 117 (46.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 75 (31.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 24/67 (35%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ R FA T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--TRSDSKFAYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDAV 69
>RGD|735178 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3, subunit
H" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;ISS] [GO:0006413
"translational initiation" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
RGD:735178 GO:GO:0043231 GO:GO:0032403 GO:GO:0006413 GO:GO:0003743
EMBL:CH473950 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:BC060586 IPI:IPI00208038
RefSeq:NP_942046.1 RefSeq:XP_003750149.1 UniGene:Rn.129213
STRING:Q6P9U8 PhosphoSite:Q6P9U8 PRIDE:Q6P9U8
Ensembl:ENSRNOT00000005786 GeneID:100911110 GeneID:299899
KEGG:rno:100911110 KEGG:rno:299899 UCSC:RGD:735178
InParanoid:Q6P9U8 NextBio:645940 Genevestigator:Q6P9U8
Uniprot:Q6P9U8
Length = 352
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 54/190 (28%), Positives = 102/190 (53%)
Query: 186 DTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TGTG 241
D+A +QV I L +LK++KH + G EV+ G++LG V++ + + + F PQ T
Sbjct: 33 DSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQHTEDD 91
Query: 242 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
+ V +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V
Sbjct: 92 ADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESV 148
Query: 302 AVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQDPKRHLEEKVDTL 354
++ DPI++ + L+ K Y K +E +E+ SPE L N+ + H+ E+V +
Sbjct: 149 VLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFE----HMFEEVPIV 204
Query: 355 M-TANIIQCL 363
+ +++I L
Sbjct: 205 IKNSHLINVL 214
>UNIPROTKB|Q56JZ5 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9913 "Bos taurus" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:AY911332 EMBL:BC102096 IPI:IPI00714818
RefSeq:NP_001020493.1 UniGene:Bt.16723 STRING:Q56JZ5 PRIDE:Q56JZ5
Ensembl:ENSBTAT00000018645 GeneID:506873 KEGG:bta:506873 CTD:8667
InParanoid:Q56JZ5 NextBio:20867779 Uniprot:Q56JZ5
Length = 352
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 54/190 (28%), Positives = 102/190 (53%)
Query: 186 DTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TGTG 241
D+A +QV I L +LK++KH + G EV+ G++LG V++ + + + F PQ T
Sbjct: 33 DSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQHTEDD 91
Query: 242 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
+ V +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V
Sbjct: 92 ADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESV 148
Query: 302 AVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNVGKQDPKRHLEEKVDTL 354
++ DPI++ + L+ K Y K +E +E+ SPE L N+ + H+ E+V +
Sbjct: 149 VLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKGNITFE----HMFEEVPIV 204
Query: 355 M-TANIIQCL 363
+ +++I L
Sbjct: 205 IKNSHLINVL 214
>UNIPROTKB|O15372 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006413 "translational initiation"
evidence=IC;IDA;TAS] [GO:0006446 "regulation of translational
initiation" evidence=TAS] [GO:0003743 "translation initiation
factor activity" evidence=IC;IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0006413 GO:GO:0006446 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 HOVERGEN:HBG000883 KO:K03247
OrthoDB:EOG4SJ5FF HAMAP:MF_03007 Reactome:REACT_1762 CTD:8667
EMBL:U54559 EMBL:AF092576 EMBL:AF092569 EMBL:AF092570 EMBL:AF092571
EMBL:AF092572 EMBL:AF092573 EMBL:AF092574 EMBL:AF092575
EMBL:BC000386 IPI:IPI00977658 RefSeq:NP_003747.1 UniGene:Hs.492599
ProteinModelPortal:O15372 SMR:O15372 DIP:DIP-33689N IntAct:O15372
MINT:MINT-5000446 STRING:O15372 PhosphoSite:O15372 PaxDb:O15372
PRIDE:O15372 DNASU:8667 Ensembl:ENST00000521861 GeneID:8667
KEGG:hsa:8667 UCSC:uc003yoa.3 GeneCards:GC08M117727 HGNC:HGNC:3273
HPA:HPA023117 HPA:HPA023553 MIM:603912 neXtProt:NX_O15372
PharmGKB:PA162384854 InParanoid:O15372 PhylomeDB:O15372
ChiTaRS:EIF3H GenomeRNAi:8667 NextBio:32511 ArrayExpress:O15372
Bgee:O15372 CleanEx:HS_EIF3H Genevestigator:O15372
GermOnline:ENSG00000147677 Uniprot:O15372
Length = 352
Score = 146 (56.5 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 49/164 (29%), Positives = 89/164 (54%)
Query: 186 DTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TGTG 241
D+A +QV I L +LK++KH + G EV+ G++LG V++ + + + F PQ T
Sbjct: 33 DSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQHTEDD 91
Query: 242 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
+ V +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V
Sbjct: 92 ADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESV 148
Query: 302 AVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNV 338
++ DPI++ + L+ K Y K +E +E+ SPE L N+
Sbjct: 149 VLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANI 192
>UNIPROTKB|B3KS98 [details] [associations]
symbol:EIF3S3 "Eukaryotic translation initiation factor 3,
subunit 3 gamma, 40kDa, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 EMBL:CH471060
GO:GO:0003743 HOGENOM:HOG000248787 HOVERGEN:HBG000883 OMA:NCFPFPK
UniGene:Hs.492599 HGNC:HGNC:3273 ChiTaRS:EIF3H EMBL:AP002905
EMBL:AC023520 EMBL:AK093128 IPI:IPI00647650
ProteinModelPortal:B3KS98 SMR:B3KS98 STRING:B3KS98 PRIDE:B3KS98
Ensembl:ENST00000276682 UCSC:uc003yob.3 ArrayExpress:B3KS98
Bgee:B3KS98 Uniprot:B3KS98
Length = 366
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 49/164 (29%), Positives = 89/164 (54%)
Query: 186 DTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTVRVIDVFAMPQ-TGTG 241
D+A +QV I L +LK++KH + G EV+ G++LG V++ + + + F PQ T
Sbjct: 47 DSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLEITNCFPFPQHTEDD 105
Query: 242 VSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAV 301
+ V +Q +M+ L+ + VGWY S +G +++ +++Q S++ E +V
Sbjct: 106 ADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESV 162
Query: 302 AVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQLAIKNV 338
++ DPI++ + L+ K Y K +E +E+ SPE L N+
Sbjct: 163 VLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANI 206
>UNIPROTKB|Q4VA72 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 EMBL:CR760965 EMBL:BC096514
RefSeq:NP_001016457.1 UniGene:Str.51157 ProteinModelPortal:Q4VA72
STRING:Q4VA72 GeneID:549211 KEGG:xtr:549211 Xenbase:XB-GENE-5812885
Uniprot:Q4VA72
Length = 261
Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ V+I A L + H + EVMGL +GE + V + V + ++ +
Sbjct: 4 QAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEIS 63
Query: 249 PV-FQAKML--DMLKQ-TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
P A D L + TGRP VVGWYHSHP W S VD+ TQ ++ + V ++
Sbjct: 64 PEQLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLI 123
>UNIPROTKB|Q66GV6 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 EMBL:BC082208 RefSeq:NP_001087827.1 UniGene:Xl.13095
ProteinModelPortal:Q66GV6 GeneID:447688 KEGG:xla:447688
Xenbase:XB-GENE-5812935 Uniprot:Q66GV6
Length = 261
Score = 142 (55.0 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVD 248
+ V+I A L + H + EVMGL +GE + V + V + ++ +
Sbjct: 4 QAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEIS 63
Query: 249 PV-FQAKML--DMLKQ-TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
P A + D L TGRP VVGWYHSHP W S VD+ TQ ++ + V ++
Sbjct: 64 PEQLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLI 123
>UNIPROTKB|A5PJP6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0031593 "polyubiquitin binding" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070531 "BRCA1-A complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0045739 GO:GO:0031572 GO:GO:0004843
GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537
EMBL:BT021737 EMBL:BC142193 IPI:IPI00687250 IPI:IPI00854460
RefSeq:NP_001069258.1 UniGene:Bt.58955 ProteinModelPortal:A5PJP6
STRING:A5PJP6 MEROPS:M67.004 GeneID:519513 KEGG:bta:519513
CTD:79184 eggNOG:NOG322509 HOGENOM:HOG000007866 NextBio:20872891
Uniprot:A5PJP6
Length = 316
Score = 117 (46.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 70 (29.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ +R F T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--LRNDPKFTYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDTV 69
>UNIPROTKB|G5E595 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070531 "BRCA1-A complex" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0000152
"nuclear ubiquitin ligase complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:DAAA02070025 EMBL:DAAA02070022 EMBL:DAAA02070023
EMBL:DAAA02070024 Ensembl:ENSBTAT00000010280 Uniprot:G5E595
Length = 316
Score = 117 (46.2 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 70 (29.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ +R F T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--LRNDPKFTYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDTV 69
>MGI|MGI:1915385 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3,
subunit H" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1915385 GO:GO:0006413 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 GeneTree:ENSGT00550000074674
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 CTD:8667 EMBL:BC014755 IPI:IPI00128202
RefSeq:NP_542366.1 UniGene:Mm.289800 ProteinModelPortal:Q91WK2
SMR:Q91WK2 MINT:MINT-4098428 STRING:Q91WK2 PhosphoSite:Q91WK2
PaxDb:Q91WK2 PRIDE:Q91WK2 Ensembl:ENSMUST00000022925 GeneID:68135
KEGG:mmu:68135 InParanoid:Q91WK2 NextBio:326504 Bgee:Q91WK2
Genevestigator:Q91WK2 GermOnline:ENSMUSG00000022312 Uniprot:Q91WK2
Length = 352
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 52/177 (29%), Positives = 92/177 (51%)
Query: 168 SGMPGLSQAPPVSDGPVVDTA-EQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDE 224
SG G + G D+A +QV I L +LK++KH + G EV+ G++LG V++
Sbjct: 15 SGSAGGAVGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED 74
Query: 225 YTVRVIDVFAMPQ-TGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLS 283
+ + + F PQ T + V +Q +M+ L+ + VGWY S +G +++
Sbjct: 75 -RLEITNCFPFPQHTEDDADFDEVQ--YQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVT 130
Query: 284 GVDINTQQSFEALSERAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQL 333
+++Q S++ E +V ++ DPI++ + L+ K Y K +E +E+ SPE L
Sbjct: 131 RALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEAL 187
>UNIPROTKB|F1RZ41 [details] [associations]
symbol:BRCC36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070552 "BRISC complex" evidence=IEA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IEA] [GO:0070531
"BRCA1-A complex" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0030234 GO:GO:0008237 GO:GO:0006302 GO:GO:0010165
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 GO:GO:0000152
GeneTree:ENSGT00390000000360 EMBL:CU914693 EMBL:CU861979
RefSeq:NP_001229952.1 UniGene:Ssc.49952 Ensembl:ENSSSCT00000014006
GeneID:100516948 KEGG:ssc:100516948 CTD:100516948 OMA:IPIHVVP
Uniprot:F1RZ41
Length = 291
Score = 117 (46.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 68 (29.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 23/67 (34%), Positives = 29/67 (43%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ R F T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--PRSDPKFTYTGTEMRTV 62
Query: 244 VEAVDPV 250
E VD V
Sbjct: 63 AEKVDAV 69
>MGI|MGI:2389572 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=ISO] [GO:0010165 "response to X-ray"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050790 "regulation of catalytic activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070537 "histone H2A
K63-linked deubiquitination" evidence=ISO] [GO:0070552 "BRISC
complex" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:2389572 GO:GO:0030234 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 HOVERGEN:HBG002142 GO:GO:0000152 EMBL:S68022
EMBL:AK011876 EMBL:AK149844 EMBL:AL671860 EMBL:BC021313
EMBL:BC048179 IPI:IPI00137103 IPI:IPI00880818 RefSeq:NP_001159929.1
RefSeq:NP_001159931.1 RefSeq:NP_666068.1 UniGene:Mm.226957
ProteinModelPortal:P46737 SMR:P46737 STRING:P46737
PhosphoSite:P46737 PaxDb:P46737 PRIDE:P46737
Ensembl:ENSMUST00000033544 Ensembl:ENSMUST00000114074
Ensembl:ENSMUST00000118428 GeneID:210766 KEGG:mmu:210766
UCSC:uc009tpy.2 GeneTree:ENSGT00390000000360 InParanoid:Q3UDZ4
OrthoDB:EOG45490C NextBio:373053 Bgee:P46737 CleanEx:MM_BRCC3
Genevestigator:P46737 GermOnline:ENSMUSG00000031201 Uniprot:P46737
Length = 291
Score = 117 (46.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 262 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
TGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLI 153
Score = 68 (29.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 184 VVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVS 243
VV + V++ S A L L H + EVMGL +GE D+ +R F T
Sbjct: 5 VVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD--IRSDSKFTYTGTEMRTV 62
Query: 244 VEAVDPV 250
E +D +
Sbjct: 63 QEKMDTI 69
>MGI|MGI:3647286 [details] [associations]
symbol:Gm5136 "predicted gene 5136" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:3647286 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0010212 GO:GO:0006302 GO:GO:0031593 GO:GO:0045739
GO:GO:0031572 GO:GO:0004843 GO:GO:0004221 GO:GO:0070531
GO:GO:0070552 EMBL:BC120506 EMBL:BC120508 EMBL:AK134982
EMBL:BN000130 IPI:IPI00279112 RefSeq:NP_988991.1 UniGene:Mm.452758
ProteinModelPortal:Q7M757 MEROPS:M67.007 PRIDE:Q7M757 GeneID:368203
KEGG:mmu:368203 UCSC:uc007gzj.2 KO:K11864 NextBio:400944
Genevestigator:Q7M757 GO:GO:0070537 Uniprot:Q7M757
Length = 291
Score = 125 (49.1 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 258 MLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVV 304
+ +QTGRP VVGWYHSHP W S VD+ TQ ++ + + V ++
Sbjct: 107 LAEQTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQSFVGLI 153
Score = 59 (25.8 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 189 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD 223
+ VY+ S A L L H + EVMGL +G+ D
Sbjct: 10 QAVYLESDAFLVCLNHALSTEKEEVMGLCIGQLND 44
>ZFIN|ZDB-GENE-040808-19 [details] [associations]
symbol:eif3ha "eukaryotic translation initiation
factor 3, subunit H, a" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420 "brain
development" evidence=IMP] [GO:0048882 "lateral line development"
evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040808-19 GO:GO:0007420 GO:GO:0006413 GO:GO:0003743
GO:GO:0001944 GO:GO:0005852 EMBL:BC079514 IPI:IPI00496845
RefSeq:NP_001003763.1 UniGene:Dr.150579 STRING:Q6AXJ2
MEROPS:M67.971 PRIDE:Q6AXJ2 Ensembl:ENSDART00000044634
Ensembl:ENSDART00000110583 GeneID:445306 KEGG:dre:445306 CTD:445306
eggNOG:NOG314046 GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
NextBio:20832051 ArrayExpress:Q6AXJ2 Bgee:Q6AXJ2 GO:GO:0048882
HAMAP:MF_03007 Uniprot:Q6AXJ2
Length = 335
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 46/173 (26%), Positives = 89/173 (51%)
Query: 170 MPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDEYTV 227
M ++ P+ +Q+ + L +LK++KH + G EV+ G++LG V++ +
Sbjct: 1 MASRKESAASGSNPLDFPVKQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVED-RL 59
Query: 228 RVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDI 287
+ + F PQ T VE + +Q +M+ L+ + VGWY S +G ++S +
Sbjct: 60 EITNCFPFPQH-TEDDVEFDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALL 117
Query: 288 NTQQSFEALSERAVAVVVDPIQSVK-ELA-KHYN---KALE--EEEKMSPEQL 333
++Q S++ E +V ++ DP+++ + L K Y K +E +E+ +PE L
Sbjct: 118 DSQFSYQHAIEESVVLIYDPLKTAQGSLCLKAYRLTPKLMEICKEKDFTPEGL 170
>UNIPROTKB|F1NJR7 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00530000063766 EMBL:AADN02012509
IPI:IPI00573219 Ensembl:ENSGALT00000017668 ArrayExpress:F1NJR7
Uniprot:F1NJR7
Length = 829
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV +SS ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 576 QVKVSSEALLIMDLHSHVSMA-EVIGLLGGRYSE--ADKVVEVCAAEPCNSLSTGLQCE- 631
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A+ +
Sbjct: 632 MDPVSQTQASETLAARGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIG 689
Query: 307 PIQS 310
I S
Sbjct: 690 MIVS 693
>UNIPROTKB|F1NCM9 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003713 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 IPI:IPI00820738 OMA:ENGLIPW
EMBL:AADN02012509 Ensembl:ENSGALT00000038040 ArrayExpress:F1NCM9
Uniprot:F1NCM9
Length = 832
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV +SS ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 578 QVKVSSEALLIMDLHSHVSMA-EVIGLLGGRYSE--ADKVVEVCAAEPCNSLSTGLQCE- 633
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A+ +
Sbjct: 634 MDPVSQTQASETLAARGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIG 691
Query: 307 PIQS 310
I S
Sbjct: 692 MIVS 695
>UNIPROTKB|Q5F3F2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 EMBL:AJ851698 IPI:IPI00820738 RefSeq:NP_001012945.1
UniGene:Gga.6922 ProteinModelPortal:Q5F3F2 SMR:Q5F3F2
MEROPS:M67.005 GeneID:424671 KEGG:gga:424671 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 InParanoid:Q5F3F2
OrthoDB:EOG4ZGPBQ NextBio:20826977 Uniprot:Q5F3F2
Length = 832
Score = 142 (55.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 45/124 (36%), Positives = 65/124 (52%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV +SS ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 578 QVKVSSEALLIMDLHSHVSMA-EVIGLLGGRYSE--ADKVVEVCAAEPCNSLSTGLQCE- 633
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A+ +
Sbjct: 634 MDPVSQTQASETLAARGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIG 691
Query: 307 PIQS 310
I S
Sbjct: 692 MIVS 695
>UNIPROTKB|Q5VVJ2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016578 "histone deubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 MEROPS:M67.005 CTD:114803 HOVERGEN:HBG079486
OrthoDB:EOG4ZGPBQ EMBL:AB067502 EMBL:AK126835 EMBL:AK292919
EMBL:BX537912 EMBL:CR627323 EMBL:CR749450 EMBL:AL450024
EMBL:AL035411 IPI:IPI00044725 IPI:IPI00740485 IPI:IPI00747702
RefSeq:NP_001078956.1 UniGene:Hs.741265 PDB:2CU7 PDB:2DCE
PDBsum:2CU7 PDBsum:2DCE ProteinModelPortal:Q5VVJ2 SMR:Q5VVJ2
DIP:DIP-58941N STRING:Q5VVJ2 PhosphoSite:Q5VVJ2 DMDM:74756898
PaxDb:Q5VVJ2 PRIDE:Q5VVJ2 DNASU:114803 Ensembl:ENST00000472487
GeneID:114803 KEGG:hsa:114803 UCSC:uc001cza.3 UCSC:uc009wab.2
GeneCards:GC01M059120 H-InvDB:HIX0000634 HGNC:HGNC:29401 MIM:612176
neXtProt:NX_Q5VVJ2 PharmGKB:PA142671301 InParanoid:Q5VVJ2
OMA:ENGLIPW EvolutionaryTrace:Q5VVJ2 GenomeRNAi:114803
NextBio:79254 Bgee:Q5VVJ2 CleanEx:HS_MYSM1 Genevestigator:Q5VVJ2
GermOnline:ENSG00000162601 Uniprot:Q5VVJ2
Length = 828
Score = 141 (54.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV ++S ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSE--VDKVVEVCAAEPCNSLSTGLQCE- 631
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VA 302
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R +
Sbjct: 632 MDPVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 689
Query: 303 VVVDPIQSVKELAKHYNKALEEEEKMSPE 331
++V P L L E++SP+
Sbjct: 690 MIVSPYNRNNPLPYSQITCLVISEEISPD 718
>ASPGD|ASPL0000029143 [details] [associations]
symbol:AN5121 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:BN001305 InterPro:IPR024969 Pfam:PF13012 HOGENOM:HOG000209236
OMA:RSIIALH EnsemblFungi:CADANIAT00003105 Uniprot:C8VEY3
Length = 349
Score = 135 (52.6 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 191 VYISSLALLKMLKH-GRA--GVPMEVMGLMLGEFVDEYTVRVIDVFAMP--QTGTGVSVE 245
V ++ L LL + H GR+ G V+G++LGE + VRV + FA+P + SV
Sbjct: 16 VTVAPLVLLSVADHYGRSAKGTRKRVVGVLLGEHIGG-NVRVSNSFAVPFEEDEKDPSVW 74
Query: 246 AVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 305
+D F M DM K+ E ++GWYHS P L D+ + F+ + + V+V
Sbjct: 75 FLDHNFVESMRDMFKKINAREKLIGWYHSGPK----LRASDLEINELFKRYTPNPLLVIV 130
Query: 306 D 306
D
Sbjct: 131 D 131
>CGD|CAL0005997 [details] [associations]
symbol:orf19.2928 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030137 "COPI-coated vesicle" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] CGD:CAL0005997
EMBL:AACQ01000017 EMBL:AACQ01000015 InterPro:IPR013861 Pfam:PF08551
RefSeq:XP_721156.1 RefSeq:XP_721428.1 GeneID:3636793 GeneID:3637072
KEGG:cal:CaO19.10445 KEGG:cal:CaO19.2928 eggNOG:NOG245035
HOGENOM:HOG000247900 Uniprot:Q5AIC5
Length = 357
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 359 IIQCLGGKLIEPLWGS-MEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGL 417
++ +G K E WG+ +E++ F IV + T+ + + G
Sbjct: 87 VVLYIGSKFAERFWGNYLEVIKFVIIVG-SITNLITVIIAIISNIIRQDGKNMDQPLGGG 145
Query: 418 TGYISGVLVAVKQIMPDH-VILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTL 476
Y G LV KQ++P+H ++L GL +++P +I+ S LW I + S+ P +
Sbjct: 146 ISYYFGFLVVCKQLIPEHNIVLFQGLINFRVKHVPFALIIFLS-LWSIIISQSLYPAIPS 204
Query: 477 FGTL-VSWIYLRFYQ 490
G+ VS+ YLRF+Q
Sbjct: 205 IGSFFVSYFYLRFFQ 219
>UNIPROTKB|Q5AIC5 [details] [associations]
symbol:CaO19.10445 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0005997 EMBL:AACQ01000017 EMBL:AACQ01000015
InterPro:IPR013861 Pfam:PF08551 RefSeq:XP_721156.1
RefSeq:XP_721428.1 GeneID:3636793 GeneID:3637072
KEGG:cal:CaO19.10445 KEGG:cal:CaO19.2928 eggNOG:NOG245035
HOGENOM:HOG000247900 Uniprot:Q5AIC5
Length = 357
Score = 134 (52.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 38/135 (28%), Positives = 65/135 (48%)
Query: 359 IIQCLGGKLIEPLWGS-MEMMTFFAIVNIGVAISSTLFYFFLYMCTFNTDLLFFVRIHGL 417
++ +G K E WG+ +E++ F IV + T+ + + G
Sbjct: 87 VVLYIGSKFAERFWGNYLEVIKFVIIVG-SITNLITVIIAIISNIIRQDGKNMDQPLGGG 145
Query: 418 TGYISGVLVAVKQIMPDH-VILNTGLGKMTNRNIPLLVILIASILWLIGLVDSIRPTMTL 476
Y G LV KQ++P+H ++L GL +++P +I+ S LW I + S+ P +
Sbjct: 146 ISYYFGFLVVCKQLIPEHNIVLFQGLINFRVKHVPFALIIFLS-LWSIIISQSLYPAIPS 204
Query: 477 FGTL-VSWIYLRFYQ 490
G+ VS+ YLRF+Q
Sbjct: 205 IGSFFVSYFYLRFFQ 219
>UNIPROTKB|E1B741 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766 KO:K11865
CTD:114803 OMA:ENGLIPW EMBL:DAAA02008758 EMBL:DAAA02008759
IPI:IPI00712636 RefSeq:NP_001179337.1 UniGene:Bt.32576 PRIDE:E1B741
Ensembl:ENSBTAT00000033324 GeneID:515332 KEGG:bta:515332
NextBio:20871773 Uniprot:E1B741
Length = 831
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/149 (30%), Positives = 73/149 (48%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV ++S ALL M H + EV+GL+ G + + ++++V A P TG+ E
Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSE--ADKIVEVCAAEPCNSLSTGLQCE- 631
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VA 302
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R +
Sbjct: 632 MDPVSQTQASETLAVRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 689
Query: 303 VVVDPIQSVKELAKHYNKALEEEEKMSPE 331
++V P L L +++SP+
Sbjct: 690 MIVSPYNRNNPLPYSQITCLVISDEISPD 718
>MGI|MGI:2444584 [details] [associations]
symbol:Mysm1 "myb-like, SWIRM and MPN domains 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016578
"histone deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042393 "histone binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 MGI:MGI:2444584
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
PROSITE:PS51293 GO:GO:0042393 InterPro:IPR017930 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 EMBL:AL732611
eggNOG:NOG329351 GeneTree:ENSGT00530000063766 KO:K11865 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 OrthoDB:EOG4ZGPBQ
OMA:ENGLIPW EMBL:AK043802 EMBL:AK081684 EMBL:AK164103 EMBL:BC150946
EMBL:BC151172 EMBL:AK173300 IPI:IPI00225524 IPI:IPI00660704
RefSeq:NP_796213.2 UniGene:Mm.208868 UniGene:Mm.468748
ProteinModelPortal:Q69Z66 SMR:Q69Z66 PhosphoSite:Q69Z66
PRIDE:Q69Z66 Ensembl:ENSMUST00000075872 GeneID:320713
KEGG:mmu:320713 UCSC:uc008tsn.1 UCSC:uc008tso.1 InParanoid:Q69Z66
NextBio:397281 Bgee:Q69Z66 CleanEx:MM_MYSM1 Genevestigator:Q69Z66
GermOnline:ENSMUSG00000062627 Uniprot:Q69Z66
Length = 819
Score = 140 (54.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 47/149 (31%), Positives = 73/149 (48%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV +++ ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 567 QVKVAAEALLIMNLHAHVSMA-EVIGLLGGRYSE--ADKVLEVCAAEPCNSLSTGLQCE- 622
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VA 302
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R +
Sbjct: 623 MDPVSQTQASETLALRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 680
Query: 303 VVVDPIQSVKELAKHYNKALEEEEKMSPE 331
++V P L L E++SP+
Sbjct: 681 MIVSPYNRSNPLPYSQITCLVISEEVSPD 709
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/88 (19%), Positives = 40/88 (45%)
Query: 58 SISINYRKNELEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKALEE 117
S +N + N++ ++ LH+ + E C+ + + N+ML + E
Sbjct: 302 SAELNEKYNKVVEEH--TLHRGEVREEAKHSPSPEPCERQDSSGNEMLLPPCQIEEENHE 359
Query: 118 EEKMSPEQLAI---KNVGKQDPKRHLEE 142
E++ P + + +NV +++ K+ + E
Sbjct: 360 GEELKPPEQEVEIDRNVIQEEEKQAIPE 387
Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 98 EGTVNDMLELAKHYNKALEEEEKMSPEQLAIKNVGKQDPKRHLEEKVDT 146
+ T + EL + YNK +EE E ++ K P E+ D+
Sbjct: 296 KSTDKNSAELNEKYNKVVEEHTLHRGE---VREEAKHSPSPEPCERQDS 341
>UNIPROTKB|F1S7A6 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766
OMA:ENGLIPW EMBL:CU929656 EMBL:CU695066 Ensembl:ENSSSCT00000004239
Uniprot:F1S7A6
Length = 835
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV ++S ALL M H + EV+GL+ G + + R+++V A P TG+ E
Sbjct: 580 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSE--VDRIVEVCAAEPCNSLSTGLQCE- 635
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A +
Sbjct: 636 MDPVSQTQASETLAVRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 693
Query: 307 PIQS 310
I S
Sbjct: 694 MIVS 697
>UNIPROTKB|F1PLC7 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766
OMA:ENGLIPW EMBL:AAEX03003792 Ensembl:ENSCAFT00000030014
Uniprot:F1PLC7
Length = 807
Score = 135 (52.6 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV ++S ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 552 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSE--VDKVVEVCAAEPCNSLSTGLQCE- 607
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVD 306
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R A +
Sbjct: 608 MDPVSQTQASETLAVRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 665
Query: 307 PIQS 310
I S
Sbjct: 666 MIVS 669
>TAIR|locus:2019903 [details] [associations]
symbol:AMSH2 "AT1G10600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 EMBL:AC009398 eggNOG:COG1310 KO:K11866 GO:GO:0071108
GO:GO:0070536 EMBL:AC007067 EMBL:AK317451 EMBL:BT012645
EMBL:AK175458 IPI:IPI00539357 IPI:IPI00657408 IPI:IPI00846823
PIR:E86239 RefSeq:NP_001031020.1 RefSeq:NP_001077505.1
RefSeq:NP_172530.2 UniGene:At.50647 ProteinModelPortal:Q6NKP9
SMR:Q6NKP9 MEROPS:M67.A05 EnsemblPlants:AT1G10600.1 GeneID:837603
KEGG:ath:AT1G10600 KEGG:dosa:Os01t0661500-01 TAIR:At1g10600
HOGENOM:HOG000015127 InParanoid:Q6NKP9 OMA:ESTSNSC PhylomeDB:Q6NKP9
ProtClustDB:CLSN2681498 Genevestigator:Q6NKP9 Uniprot:Q6NKP9
Length = 223
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 43/162 (26%), Positives = 73/162 (45%)
Query: 153 IQCLDRNMERLLRLGSGMPGLSQAPPVSDGPVVDTAEQVYISSLALLKMLKHGRAGVP-- 210
+ C ++ R+L SG ++ S+ ++ V+IS L + R
Sbjct: 17 VTCKSSHVSRVLI--SGTDNINHGES-SEAKIL---RDVHISERLLEDFTELARENTEKD 70
Query: 211 MEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVG 270
+E G L F++ V + Q T S +A++ V ++ + Q R VG
Sbjct: 71 LETCGT-LAAFLERGIFYVTTLIIPKQESTSNSCQAMNEV---EVFSI--QNERELYPVG 124
Query: 271 WYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 312
W H+HP GC++S VD++T S++ + A A+VV P S K
Sbjct: 125 WIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSK 166
>RGD|1311787 [details] [associations]
symbol:Mysm1 "myb-like, SWIRM and MPN domains 1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA;ISO] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008237
"metallopeptidase activity" evidence=IEA;ISO] [GO:0016578 "histone
deubiquitination" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 RGD:1311787 GO:GO:0045893 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578 GO:GO:0004843
GO:GO:0004221 GeneTree:ENSGT00530000063766 KO:K11865 CTD:114803
OrthoDB:EOG4ZGPBQ OMA:ENGLIPW IPI:IPI00365065 RefSeq:XP_001058020.2
RefSeq:XP_216460.5 UniGene:Rn.63856 Ensembl:ENSRNOT00000039554
GeneID:298247 KEGG:rno:298247 UCSC:RGD:1311787 NextBio:643363
Uniprot:D4A7T9
Length = 811
Score = 142 (55.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 48/149 (32%), Positives = 73/149 (48%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAM-P--QTGTGVSVEA 246
QV ++S ALL M H + EV+GL+ G + + +V++V A P TG+ E
Sbjct: 559 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSE--ADKVLEVCAAEPCNSLSTGLQCE- 614
Query: 247 VDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VA 302
+DPV Q + + L G V+GWYHSHP F S DI+TQ +++ R +
Sbjct: 615 MDPVSQTQASETLALRGCS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIG 672
Query: 303 VVVDPIQSVKELAKHYNKALEEEEKMSPE 331
++V P L L E++SP+
Sbjct: 673 MIVSPYNRSNPLPYSQITCLVISEELSPD 701
Score = 39 (18.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 95 KLNEGTVNDMLELAKHYNKALEE------EEKMSPEQLAIKNVGKQDPK 137
K N N + EL + Y+K +EE E K SP + G++DP+
Sbjct: 289 KQNNNGKNSV-ELNEKYSKLVEEYTMLTEETKHSPSPEPCE--GQKDPR 334
>UNIPROTKB|A0JMR6 [details] [associations]
symbol:mysm1 "Histone H2A deubiquitinase MYSM1"
species:8355 "Xenopus laevis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 KO:K11865 MEROPS:M67.005 CTD:114803
EMBL:BC125979 RefSeq:NP_001090503.1 UniGene:Xl.3062
ProteinModelPortal:A0JMR6 SMR:A0JMR6 GeneID:779416 KEGG:xla:779416
Xenbase:XB-GENE-1032962 Uniprot:A0JMR6
Length = 818
Score = 133 (51.9 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 190 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-EYTVRVIDVFAMPQTGTGVSVEAVD 248
QV +S A+L + H + EV+GL+ G + + E V + V TG+ E +D
Sbjct: 547 QVKVSCEAMLVLDLHAHVSMA-EVIGLLGGRYTESESVVEICAVEPCNSLSTGLQCE-MD 604
Query: 249 PVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVA 302
PV Q + + L G V+GWYHSHP F S DI+TQ ++ R A
Sbjct: 605 PVSQTQASEALASRGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGA 656
>UNIPROTKB|B6MUN4 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:7739 "Branchiostoma floridae" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0003713 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
EMBL:ABEP02030881 EMBL:ABEP02030882 EMBL:ABEP02030884
ProteinModelPortal:B6MUN4 Uniprot:B6MUN4
Length = 809
Score = 132 (51.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 42/127 (33%), Positives = 59/127 (46%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFV-DEYTVRVIDVFAMPQTGTGVSVEAVDP 249
V I + AL+ + H EV+GL+ G F D + V TG+ E +DP
Sbjct: 592 VKIHATALVTIDMHAHISTA-EVIGLLGGVFHRDPGALEVASAEPCNSLSTGMQCE-MDP 649
Query: 250 VFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VAVVV 305
V Q + + L Q G VVGWYHSHP F S DI TQ F+ + + ++V
Sbjct: 650 VSQTQASEALSQAGYS--VVGWYHSHPTFAPNPSVRDIETQTKFQEWFAQGGSPFIGIIV 707
Query: 306 DPIQSVK 312
+P S +
Sbjct: 708 NPYSSTR 714
>UNIPROTKB|F1P4L2 [details] [associations]
symbol:BRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0031572 "G2 DNA damage
checkpoint" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070552 "BRISC complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:AADN02013225 IPI:IPI00823271
Ensembl:ENSGALT00000040298 ArrayExpress:F1P4L2 Uniprot:F1P4L2
Length = 226
Score = 122 (48.0 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 236 PQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEA 295
P+ + S EA + ++ +M TGRP VVGWYHSHP W S VD+ TQ ++
Sbjct: 2 PEQLSAASTEAHLSLLTHRLAEM---TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQM 58
Query: 296 LSERAVAVV 304
+ + V ++
Sbjct: 59 MDQGFVGLI 67
>ZFIN|ZDB-GENE-041014-28 [details] [associations]
symbol:mysm1 "Myb-like, SWIRM and MPN domains 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0016578 "histone
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 ZFIN:ZDB-GENE-041014-28
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 HSSP:Q5VVJ2 KO:K11865 eggNOG:COG5259
CTD:114803 HOGENOM:HOG000113713 OrthoDB:EOG4ZGPBQ EMBL:BX942841
EMBL:BC134239 IPI:IPI00494402 RefSeq:NP_001157501.1
UniGene:Dr.86682 Ensembl:ENSDART00000044655 GeneID:561225
KEGG:dre:561225 InParanoid:A3KPA5 NextBio:20883824 Bgee:Q5RGA4
Uniprot:Q5RGA4
Length = 822
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 191 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTV-RVIDVFAMPQTGTGVSVEAVDP 249
V + + AL+ M H + EV+GL+ G + +E V ++ TG+ E +DP
Sbjct: 517 VIVCAEALIVMDIHAHVSMG-EVIGLLGGTYEEEDKVLKICSAEPCNSLSTGLQCE-MDP 574
Query: 250 VFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA----VAVVV 305
V Q + ++L G VVGWYHSHP F S DI+TQ +++ R + ++V
Sbjct: 575 VSQTQASEVLGVKGLS--VVGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAPFIGMIV 632
Query: 306 DPIQSVKELAKHYNKALEEEEKMSP 330
P + + L +E+ P
Sbjct: 633 SPYNPSNSSPQSQSTCLLVQEEPGP 657
>TAIR|locus:2196469 [details] [associations]
symbol:TIF3H1 "AT1G10840" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003743 EMBL:AC007354
eggNOG:COG1310 HOGENOM:HOG000248787 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF285833 EMBL:AY054641 EMBL:AY081546
EMBL:BT000765 EMBL:AY087338 IPI:IPI00526917 PIR:B86242
RefSeq:NP_563880.1 UniGene:At.17013 ProteinModelPortal:Q9C5Z2
IntAct:Q9C5Z2 STRING:Q9C5Z2 PaxDb:Q9C5Z2 PRIDE:Q9C5Z2
EnsemblPlants:AT1G10840.1 GeneID:837627 KEGG:ath:AT1G10840
TAIR:At1g10840 InParanoid:Q9C5Z2 PhylomeDB:Q9C5Z2
ProtClustDB:CLSN2687763 Genevestigator:Q9C5Z2 Uniprot:Q9C5Z2
Length = 337
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 36/127 (28%), Positives = 57/127 (44%)
Query: 181 DGPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVIDVFAMPQTGT 240
D V V I LA+LK++KH + P V G +LG V + V + F P
Sbjct: 15 DEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGS-VLEVTNCFPFPVRDD 73
Query: 241 GVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERA 300
+EA +Q +M+ L++ VGWY S G + + I T +++ +R
Sbjct: 74 DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTV-LGSYQTVELIETFMNYQENIKRC 132
Query: 301 VAVVVDP 307
V ++ DP
Sbjct: 133 VCIIYDP 139
>DICTYBASE|DDB_G0284037 [details] [associations]
symbol:DDB_G0284037 "MPN/PAD-1 domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
dictyBase:DDB_G0284037 GenomeReviews:CM000153_GR GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 EMBL:AAFI02000063 eggNOG:COG1310
KO:K11866 EMBL:AF018638 RefSeq:XP_638757.1
ProteinModelPortal:Q54Q40 MEROPS:M67.A15 EnsemblProtists:DDB0191462
GeneID:8624428 KEGG:ddi:DDB_G0284037 InParanoid:Q54Q40
Uniprot:Q54Q40
Length = 715
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 27/100 (27%), Positives = 54/100 (54%)
Query: 211 MEVMGLMLGEFVDEYTVRVIDVFAMPQTGTGVSVEAVDP--VFQAKMLDMLKQTGRPEMV 268
+E G++ G ++ R+ + Q GT + ++ +F+ ++ + L +
Sbjct: 559 IETCGILSGTLSND-VFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDL-------LT 610
Query: 269 VGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPI 308
+GW H+HP C+LS VD++T S++ L + A+AVV+ P+
Sbjct: 611 LGWIHTHPTQDCFLSAVDVHTHCSYQYLLQEAIAVVISPM 650
Score = 48 (22.0 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 65 KNELEQKMLLNLHKKTWMDGLSLQDYNEHCKLNEGTVNDMLELAKHYNKA-------LEE 117
K E EQ++L ++ + L L+ + K E N L+ K+ +A L
Sbjct: 143 KLEREQQLLREEEEQRKREDLELESEIQRLKEVEDFENRKLQAQKNIKRATSARTFELLR 202
Query: 118 EEKMSPEQLAIKNVGKQDPKRHLEEKVDTL 147
+E + E+ ++ + + + KR L EK + L
Sbjct: 203 QEALLEERKRLQGI-ETEKKRILAEKQEAL 231
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 574 566 0.00079 120 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 97
No. of states in DFA: 615 (65 KB)
Total size of DFA: 307 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 52.55u 0.13s 52.68t Elapsed: 00:00:08
Total cpu time: 52.56u 0.13s 52.69t Elapsed: 00:00:08
Start: Thu Aug 15 15:20:19 2013 End: Thu Aug 15 15:20:27 2013