Query psy15736
Match_columns 70
No_of_seqs 75 out of 77
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 20:05:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy15736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/15736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fa8_A Secreted protein BARF1; 98.4 2.3E-07 8E-12 61.4 3.8 54 16-69 85-138 (203)
2 2wv3_A Neuroplastin; igcam, me 98.4 7.7E-07 2.6E-11 55.4 5.7 53 16-69 72-124 (190)
3 2cry_A KIN of IRRE-like protei 98.3 5.3E-08 1.8E-12 58.5 -0.1 42 26-68 3-44 (122)
4 1rhf_A Tyrosine-protein kinase 98.3 1.4E-06 4.7E-11 53.5 5.4 52 16-67 76-128 (182)
5 2jll_A NCAM2, neural cell adhe 98.2 9.1E-07 3.1E-11 60.1 3.8 54 16-69 79-132 (389)
6 2v5m_A Dscam; neurobiology SPL 98.2 2.4E-06 8.1E-11 58.0 5.4 54 16-69 286-339 (388)
7 2rik_A Titin; I-SET IG fold, p 98.2 1.3E-06 4.3E-11 56.9 3.8 54 16-69 171-224 (284)
8 3p3y_A Neurofascin; IG domains 98.2 1.9E-06 6.6E-11 58.4 4.5 54 16-69 291-344 (404)
9 2c5d_C AXL oncogene, tyrosine- 98.1 3.8E-06 1.3E-10 52.2 4.8 54 16-69 84-139 (195)
10 1bih_A Hemolin; insect immunit 98.1 4.1E-06 1.4E-10 56.8 5.3 54 16-69 286-341 (395)
11 3b5h_A Cervical EMMPRIN, HAB18 98.1 2.2E-06 7.5E-11 52.8 3.6 51 16-69 65-116 (184)
12 3laf_A Deleted in colorectal c 98.1 1.9E-06 6.6E-11 58.5 3.4 54 16-69 291-344 (403)
13 1epf_A NCAM, protein (neural c 98.1 3.2E-06 1.1E-10 52.0 4.0 54 16-69 78-132 (191)
14 2j8h_A Titin, connectin; cardi 98.1 2.3E-06 7.9E-11 52.9 3.4 54 16-69 78-136 (197)
15 3b43_A Titin; I-SET IG fold, e 98.1 4.5E-06 1.6E-10 61.2 5.1 54 16-69 363-416 (570)
16 3kvq_A Vascular endothelial gr 98.0 1E-06 3.6E-11 50.9 0.8 42 28-69 1-42 (108)
17 2a38_A Titin; Z1Z2, structural 98.0 8.5E-06 2.9E-10 50.0 4.2 54 16-69 79-135 (194)
18 4fqp_A Poliovirus receptor; im 98.0 7.3E-06 2.5E-10 54.7 4.2 53 16-68 193-248 (313)
19 3u83_A Poliovirus receptor-rel 98.0 4.6E-06 1.6E-10 55.4 3.1 53 16-68 210-263 (331)
20 2v44_A NCAM2, neural cell adhe 98.0 8.1E-06 2.8E-10 50.3 4.1 54 16-69 74-128 (189)
21 2yd1_A Tyrosine-protein phosph 97.9 1.1E-05 3.8E-10 51.0 4.6 54 16-69 81-142 (212)
22 2yd6_A PTPRD protein; hydrolas 97.9 1.5E-05 5.1E-10 50.6 5.0 54 16-69 80-140 (212)
23 2va4_A NCAM2, N-CAM 2, neural 97.9 1.4E-05 4.9E-10 48.8 4.7 53 16-69 74-126 (192)
24 3kld_A Contactin 4, axcam, BIG 97.9 9E-06 3.1E-10 56.4 4.0 54 16-69 274-327 (384)
25 1cs6_A Axonin-1; neural cell a 97.9 9.3E-06 3.2E-10 55.1 4.0 54 16-69 273-326 (382)
26 2iep_A Muscle-specific kinase 97.9 1.2E-05 4.1E-10 49.3 3.9 54 16-69 78-132 (192)
27 2yr3_A Myosin light chain kina 97.9 9.3E-06 3.2E-10 46.4 3.0 38 32-69 6-43 (99)
28 3qp3_A Titin; I-SET IG-like, s 97.8 7E-06 2.4E-10 47.1 2.2 38 32-69 3-40 (103)
29 3b43_A Titin; I-SET IG fold, e 97.8 2.6E-05 9E-10 57.2 5.7 54 16-69 456-509 (570)
30 2nzi_A Titin; IG-domain, FNIII 97.8 1.2E-05 4.2E-10 52.7 3.5 54 16-69 78-136 (305)
31 2ec8_A MAST/stem cell growth f 97.8 4.8E-05 1.6E-09 54.3 6.8 53 16-68 289-344 (524)
32 3qs7_E FL cytokine receptor; i 97.8 1.8E-05 6E-10 57.2 4.6 51 16-69 306-358 (423)
33 1fhg_A Telokin; immunoglobulin 97.8 8.2E-06 2.8E-10 51.0 2.5 45 25-69 29-73 (154)
34 2v9t_A Roundabout homolog 1; s 97.8 7.8E-06 2.7E-10 48.2 2.2 38 32-69 4-41 (117)
35 3ejj_X Macrophage colony-stimu 97.8 3.5E-05 1.2E-09 50.0 5.2 54 16-69 160-219 (289)
36 3sbw_C Programmed cell death 1 97.8 3.5E-05 1.2E-09 48.3 5.0 53 16-69 96-148 (222)
37 3dmk_A DOWN syndrome cell adhe 97.8 1.7E-05 5.7E-10 59.7 4.0 54 16-69 693-746 (816)
38 3jz7_A MCAR, CAR, coxsackievir 97.8 1.4E-05 4.8E-10 49.2 3.0 54 16-69 100-154 (214)
39 1f97_A Junction adhesion molec 97.8 1.8E-05 6.2E-10 48.8 3.3 54 16-69 81-137 (212)
40 3lcy_A Titin; A-BAND, IG tande 97.8 2.7E-05 9.1E-10 47.6 4.0 54 16-69 79-135 (197)
41 2o26_X MAST/stem cell growth f 97.8 2.4E-05 8.2E-10 51.3 4.0 53 16-68 162-219 (290)
42 1qz1_A Neural cell adhesion mo 97.8 3.4E-05 1.2E-09 50.1 4.6 54 16-69 171-228 (291)
43 2oz4_A Intercellular adhesion 97.7 4.8E-06 1.6E-10 54.5 0.2 54 16-69 158-217 (265)
44 1vca_A VCAM-D1,2, human vascul 97.7 2.4E-05 8.3E-10 50.6 3.6 50 16-66 70-120 (202)
45 2ifg_A High affinity nerve gro 97.7 9.5E-06 3.3E-10 55.9 1.6 50 16-69 229-278 (347)
46 2kdg_A Myotilin; immonoglobuli 97.7 1.1E-05 3.9E-10 45.8 1.7 36 34-69 2-37 (100)
47 1z7z_I Intercellular adhesion 97.7 3.2E-06 1.1E-10 59.0 -1.0 54 16-69 343-402 (450)
48 2rik_A Titin; I-SET IG fold, p 97.7 6.9E-05 2.3E-09 48.7 5.5 54 16-69 77-131 (284)
49 2yd9_A Receptor-type tyrosine- 97.7 3.2E-05 1.1E-09 51.2 3.8 54 16-69 80-140 (304)
50 2e7c_A Myosin-binding protein 97.7 1.5E-05 5.2E-10 47.3 1.7 49 21-69 2-56 (118)
51 3mjg_X Beta-type platelet-deri 97.7 3.4E-05 1.2E-09 50.4 3.5 54 16-69 157-213 (289)
52 2v5t_A NCAM2, N-CAM 2, neural 97.6 4.3E-05 1.5E-09 46.5 3.6 53 17-69 74-130 (189)
53 1qz1_A Neural cell adhesion mo 97.6 5.9E-05 2E-09 49.0 4.5 54 16-69 78-132 (291)
54 2pet_A Lutheran blood group gl 97.6 8.6E-05 3E-09 46.6 4.8 54 16-69 93-152 (231)
55 3qs7_E FL cytokine receptor; i 97.6 3.7E-05 1.3E-09 55.5 3.4 53 16-69 119-171 (423)
56 3bp6_B Programmed cell death 1 97.6 9.6E-05 3.3E-09 46.1 4.6 53 16-69 83-135 (202)
57 2ocw_A Polymeric-immunoglobuli 97.6 5E-05 1.7E-09 54.6 3.6 54 16-69 306-363 (585)
58 2dm3_A KIAA0992 protein, palla 97.6 4.5E-05 1.5E-09 44.1 2.8 35 35-69 7-41 (110)
59 2edh_A Obscurin; structural ge 97.6 5.1E-05 1.7E-09 44.5 3.0 44 22-65 3-47 (113)
60 2yd9_A Receptor-type tyrosine- 97.6 5.9E-05 2E-09 49.9 3.6 54 16-69 180-237 (304)
61 2wim_A N-CAM 2, NCAM2, neural 97.5 2.4E-05 8.4E-10 50.8 1.6 54 16-69 169-226 (291)
62 1wit_A Twitchin 18TH IGSF modu 97.5 7.1E-05 2.4E-09 42.5 3.0 33 37-69 2-34 (93)
63 3knb_A Titin; IG-like, titin, 97.5 5.6E-05 1.9E-09 44.8 2.6 34 36-69 4-37 (100)
64 1u2h_A APEG-1, aortic preferen 97.5 9E-05 3.1E-09 41.9 3.3 35 35-69 3-37 (99)
65 2ec8_A MAST/stem cell growth f 97.5 7.8E-05 2.7E-09 53.2 3.6 48 16-69 391-438 (524)
66 1nbq_A JAM, junctional adhesio 97.5 1.5E-05 5.3E-10 49.1 -0.1 54 16-69 84-140 (209)
67 3puc_A Titin; I-SET IG-like do 97.5 0.0001 3.5E-09 41.6 3.4 36 34-69 3-38 (99)
68 3k0w_A Mucosa-associated lymph 97.5 0.00016 5.5E-09 46.2 4.6 54 16-69 81-150 (218)
69 4fom_A Poliovirus receptor-rel 97.4 3.2E-05 1.1E-09 51.1 1.2 52 16-67 188-242 (308)
70 4dkd_C Macrophage colony-stimu 97.4 0.00031 1E-08 45.6 5.7 52 16-67 160-216 (292)
71 2r15_A Myomesin-1; sarcomeric 97.4 0.00017 5.8E-09 44.7 4.1 54 16-69 75-149 (212)
72 3nl4_L Antigen binding fragmen 97.4 0.00014 4.7E-09 45.6 3.6 54 16-69 87-147 (213)
73 1wwb_X Protein (brain derived 97.4 6.2E-05 2.1E-09 44.4 1.7 33 34-69 1-33 (103)
74 3irg_A Titin; IG-like, titin, 97.3 0.00012 4E-09 41.1 2.6 34 36-69 4-37 (100)
75 1wwc_A Protein (NT-3 growth fa 97.3 5.2E-05 1.8E-09 44.9 1.2 37 30-69 1-37 (118)
76 3pv7_A B7-H6, IG-like domain-c 97.3 0.00026 8.8E-09 45.6 4.5 51 16-67 98-149 (248)
77 1z7z_I Intercellular adhesion 97.3 0.00019 6.5E-09 50.0 4.0 52 16-67 64-116 (450)
78 1itb_B Type 1 interleukin-1 re 97.3 0.00028 9.6E-09 46.5 4.5 43 27-69 193-241 (315)
79 1g1c_A Immunoglobulin-like dom 97.3 0.00022 7.4E-09 40.3 3.3 34 36-69 4-37 (99)
80 2cr6_A KIAA1556 protein, obscu 97.3 0.00012 4E-09 43.5 2.1 41 29-69 4-45 (115)
81 3so5_A LIG-3, leucine-rich rep 97.3 0.00056 1.9E-08 38.4 4.9 37 30-66 3-39 (112)
82 3knb_B Obscurin-like protein 1 97.3 0.00021 7.2E-09 43.0 3.3 33 37-69 13-45 (107)
83 3d9a_H Heavy chain of hyhel10 97.3 0.00032 1.1E-08 44.3 4.2 50 17-67 95-149 (210)
84 1e07_A Carcinoembryonic antige 97.3 0.00023 7.8E-09 52.1 4.0 54 16-69 536-591 (642)
85 1nct_A Titin; cell adhesion, g 97.2 0.00033 1.1E-08 41.3 3.8 36 34-69 11-46 (106)
86 3mj8_L Stimulatory hamster ant 97.2 0.00027 9.4E-09 44.2 3.6 50 17-66 87-143 (213)
87 1nqb_A Single-chain antibody f 97.2 0.00064 2.2E-08 45.1 5.5 52 16-67 95-151 (256)
88 3grw_A Fibroblast growth facto 97.2 0.00038 1.3E-08 44.1 4.2 54 16-69 88-146 (241)
89 3qs9_E FL cytokine receptor; i 97.2 0.00029 9.8E-09 52.6 4.0 51 16-69 306-358 (527)
90 1c1e_H Catalytic antibody 1E9 97.2 0.00033 1.1E-08 44.3 3.8 53 17-69 96-158 (219)
91 3s97_C Contactin-1; carbonic a 97.2 0.00056 1.9E-08 41.7 4.6 35 35-69 111-145 (201)
92 2vol_A Murine IGG FC; FC, zinc 97.2 0.00036 1.2E-08 44.6 3.8 52 16-67 84-139 (207)
93 3umt_A SCFV heavy chain and li 97.2 0.00086 2.9E-08 43.8 5.6 53 17-69 98-170 (256)
94 3lcy_A Titin; A-BAND, IG tande 97.2 0.00032 1.1E-08 42.7 3.2 37 33-69 3-39 (197)
95 3rjd_A High affinity immunoglo 97.1 0.00048 1.7E-08 43.8 4.1 50 16-66 147-199 (262)
96 3mtr_A N-CAM-1, NCAM-1, neural 97.1 0.00028 9.5E-09 44.7 2.9 35 34-69 16-50 (215)
97 3qr2_A Basigin; CD147, EMMPRIN 97.1 0.00052 1.8E-08 41.5 4.0 36 34-69 18-53 (137)
98 3irg_B Obscurin-like protein 1 97.1 0.00041 1.4E-08 39.7 3.3 38 32-69 8-45 (107)
99 2edj_A Roundabout homolog 2; K 97.1 0.0003 1E-08 40.1 2.7 35 35-69 6-40 (100)
100 3eow_R Poliovirus receptor; im 97.1 0.00017 5.8E-09 45.8 1.8 52 17-69 95-149 (221)
101 1gsm_A Madcam-1, mucosal addre 97.1 0.00063 2.1E-08 46.8 4.8 50 16-67 75-125 (210)
102 3r4d_A CEA-related cell adhesi 97.1 0.00061 2.1E-08 42.2 4.3 48 16-65 87-138 (208)
103 3dmk_A DOWN syndrome cell adhe 97.1 0.00066 2.3E-08 51.1 5.2 54 16-69 322-375 (816)
104 2ghw_B Anti-SARS SCFV antibody 97.1 0.00074 2.5E-08 43.4 4.8 53 17-69 98-167 (247)
105 2wim_A N-CAM 2, NCAM2, neural 97.1 0.00019 6.6E-09 46.5 2.0 54 16-69 76-130 (291)
106 3v2a_R Vascular endothelial gr 97.1 0.00019 6.7E-09 52.8 2.1 54 16-69 306-362 (772)
107 2cqv_A MLCK, myosin light chai 97.1 0.00038 1.3E-08 40.8 2.9 34 36-69 6-39 (114)
108 3tv3_L PGT128 light chain, IG 97.1 0.00042 1.4E-08 43.4 3.3 50 17-66 85-140 (211)
109 1c5d_H Monoclonal antibody aga 97.1 0.00071 2.4E-08 43.3 4.4 51 17-67 95-153 (215)
110 1pz5_B Heavy chain of FAB (SYA 97.1 0.0008 2.7E-08 42.7 4.5 51 17-67 98-156 (220)
111 1wio_A CD4, T-cell surface gly 97.0 0.00011 3.6E-09 50.2 0.3 51 16-69 158-213 (363)
112 3ejj_X Macrophage colony-stimu 97.0 0.00084 2.9E-08 43.4 4.5 52 16-67 67-119 (289)
113 1q9r_B S25-2 FAB (IGG1K) heavy 97.0 0.001 3.4E-08 42.3 4.7 51 17-67 98-158 (222)
114 3laf_A Deleted in colorectal c 97.0 0.00026 9E-09 48.0 2.1 54 16-69 98-153 (403)
115 1qgc_4 Protein (immunoglobulin 97.0 0.00063 2.2E-08 46.9 4.0 52 16-67 313-374 (438)
116 2v9r_A Roundabout homolog 1; p 97.0 0.00023 7.7E-09 44.0 1.6 54 16-69 88-144 (212)
117 2rgs_A I, IG gamma-2B heavy ch 97.0 0.00035 1.2E-08 45.1 2.6 52 16-67 92-148 (218)
118 2dm2_A Palladin; beta-sandwich 97.0 0.00027 9.3E-09 41.0 1.8 35 35-69 6-40 (110)
119 1za6_B IGG heavy chain; immuno 97.0 0.00093 3.2E-08 45.5 4.7 54 16-69 95-154 (344)
120 2ocw_A Polymeric-immunoglobuli 97.0 0.00086 3E-08 48.2 4.7 51 16-66 91-141 (585)
121 3oq3_B IFN-alpha/beta binding 97.0 0.0016 5.6E-08 43.9 5.9 49 16-65 198-256 (329)
122 2fbo_J V1V2;, variable region- 97.0 0.00047 1.6E-08 43.7 3.0 53 17-69 107-168 (250)
123 2x1w_L Vascular endothelial gr 97.0 0.0011 3.9E-08 42.2 4.5 52 16-67 80-135 (213)
124 2vr9_A Roundabout 1, ROBO; imm 96.9 0.00022 7.6E-09 44.6 1.1 53 17-69 86-141 (217)
125 3u83_A Poliovirus receptor-rel 96.9 0.0019 6.3E-08 42.7 5.6 54 16-69 108-168 (331)
126 3r06_A Anti-mouse CD3epsilon a 96.9 0.00098 3.4E-08 41.7 4.1 52 16-67 87-142 (213)
127 2wng_A Tyrosine-protein phosph 96.9 0.00041 1.4E-08 46.4 2.4 50 16-67 196-250 (327)
128 2d3v_A Leukocyte immunoglobuli 96.9 0.00043 1.5E-08 43.5 2.4 51 16-68 74-129 (196)
129 2o26_X MAST/stem cell growth f 96.9 0.0003 1E-08 46.1 1.6 50 16-69 73-123 (290)
130 3bae_H WO2 IGG2A FAB fragment 96.9 0.0011 3.7E-08 42.8 4.3 40 28-67 117-161 (228)
131 1ry7_B FGFR-3, fibroblast grow 96.9 0.0002 7E-09 47.6 0.8 54 16-69 196-254 (334)
132 3ojm_B Fibroblast growth facto 96.9 0.00067 2.3E-08 42.2 2.9 54 16-69 92-150 (231)
133 4dep_C Interleukin-1 receptor 96.9 0.00025 8.7E-09 47.6 1.0 54 16-69 193-262 (349)
134 3s96_B 3B5H10 FAB light chain; 96.9 0.0005 1.7E-08 43.0 2.3 51 17-67 92-152 (218)
135 3bfo_A Mucosa-associated lymph 96.8 0.0011 3.9E-08 37.3 3.5 33 37-69 3-35 (91)
136 1dee_B IGM RF 2A2; FAB-IBP com 96.8 0.0013 4.4E-08 42.5 4.1 41 27-67 112-157 (223)
137 1igt_B IGG2A intact antibody - 96.8 0.0009 3.1E-08 46.9 3.5 52 16-67 321-377 (444)
138 2oz4_A Intercellular adhesion 96.8 0.0015 5.3E-08 42.5 4.4 50 16-69 77-128 (265)
139 2yd6_A PTPRD protein; hydrolas 96.8 0.00095 3.2E-08 42.1 3.3 36 34-69 3-38 (212)
140 1e07_A Carcinoembryonic antige 96.8 0.0013 4.3E-08 48.2 4.2 54 16-69 358-413 (642)
141 2y25_A Myomesin; structural pr 96.8 0.00092 3.1E-08 43.7 3.2 54 16-69 180-254 (317)
142 3juy_B 3B3 single chain varian 96.8 0.003 1E-07 41.1 5.6 46 23-68 120-181 (256)
143 2xot_A Amphoterin-induced prot 96.8 0.00057 1.9E-08 48.0 2.2 43 16-69 317-359 (361)
144 1ugn_A LIR1, leukocyte immunog 96.8 0.0011 3.8E-08 41.5 3.3 49 16-65 74-128 (198)
145 3v2a_R Vascular endothelial gr 96.8 0.00022 7.5E-09 52.6 0.0 53 16-69 529-581 (772)
146 4dkd_C Macrophage colony-stimu 96.8 0.0009 3.1E-08 43.4 2.9 50 16-66 67-117 (292)
147 3o4o_C Interleukin-1 receptor 96.7 0.00031 1.1E-08 46.9 0.6 53 16-68 196-261 (339)
148 3sgj_C Human FCG3A receptor; r 96.7 0.0022 7.6E-08 41.3 4.6 48 16-66 70-117 (204)
149 2wng_A Tyrosine-protein phosph 96.7 0.0015 5.1E-08 43.7 3.9 52 16-67 90-147 (327)
150 1l6x_A Immunoglobulin gamma-1 96.7 0.0013 4.5E-08 41.8 3.4 51 16-66 84-138 (207)
151 2iep_A Muscle-specific kinase 96.7 0.0005 1.7E-08 41.9 1.3 37 33-69 3-39 (192)
152 3d9a_L Light chain of hyhel10 96.7 0.0013 4.5E-08 41.1 3.2 52 16-67 87-143 (213)
153 2v9r_A Roundabout homolog 1; p 96.7 0.00083 2.8E-08 41.4 2.2 36 34-69 6-41 (212)
154 2rcj_C Light chain; immunoglob 96.7 0.0021 7.2E-08 45.8 4.5 52 16-67 400-455 (523)
155 1dr9_A B7-1 (CD80), T lymphocy 96.6 0.0026 9E-08 39.5 4.4 50 16-69 81-139 (201)
156 2lvc_A Obscurin-like protein 1 96.6 0.0013 4.6E-08 38.8 2.9 34 35-69 2-37 (91)
157 3qs9_E FL cytokine receptor; i 96.6 0.0024 8.2E-08 47.6 4.9 52 16-69 207-260 (527)
158 2xzc_L FAB A.17 light chain; i 96.6 0.0017 5.7E-08 40.9 3.5 50 16-65 88-142 (216)
159 1op3_H FAB 2G12, heavy chain; 96.6 0.0021 7.3E-08 41.3 4.0 40 28-67 115-159 (225)
160 1ry7_B FGFR-3, fibroblast grow 96.6 0.00053 1.8E-08 45.6 1.1 53 16-69 77-155 (334)
161 3gkz_A Anti-methamphetamine si 96.6 0.0022 7.5E-08 41.7 4.0 51 17-67 103-171 (257)
162 3nl4_H Antigen binding fragmen 96.6 0.003 1E-07 40.0 4.5 51 17-67 92-150 (215)
163 2e7b_A Obscurin; IG-like domai 96.6 0.0012 4E-08 37.8 2.3 32 36-67 7-38 (103)
164 2eo9_A Roundabout homolog 1; b 96.6 0.0005 1.7E-08 40.4 0.7 34 36-69 7-40 (118)
165 1hng_A CD2; T lymphocyte adhes 96.6 0.0019 6.7E-08 40.7 3.4 49 16-69 77-127 (176)
166 2edf_A Obscurin; beta-sandwich 96.5 0.0022 7.6E-08 36.6 3.3 33 36-69 7-39 (103)
167 2yd1_A Tyrosine-protein phosph 96.5 0.0028 9.7E-08 39.8 4.0 34 36-69 5-38 (212)
168 1q0x_L FAB 9B1, light chain; a 96.5 0.0028 9.5E-08 39.7 4.0 51 17-67 90-145 (212)
169 1f3r_B FV antibody fragment; I 96.5 0.0017 6E-08 42.6 3.1 43 27-69 114-171 (257)
170 1he7_A High affinity nerve gro 96.5 0.00096 3.3E-08 43.0 1.8 31 35-69 2-32 (126)
171 3uzq_A Anti-dengue MAB 4E11; d 96.5 0.004 1.4E-07 40.5 4.6 51 17-67 97-163 (253)
172 2wqr_A IG epsilon chain C regi 96.5 0.003 1E-07 42.5 4.1 52 16-67 194-249 (323)
173 2p1y_A Bispecific alpha/beta T 96.5 0.003 1E-07 40.2 3.9 42 28-69 106-159 (238)
174 2j8h_A Titin, connectin; cardi 96.5 0.0034 1.1E-07 38.5 4.0 34 36-69 3-36 (197)
175 1fnl_A Low affinity immunoglob 96.5 0.0054 1.8E-07 37.7 4.9 49 16-67 70-118 (175)
176 2ens_A Advanced glycosylation 96.4 0.0012 4.1E-08 37.6 1.7 33 37-69 10-42 (96)
177 2c1o_A IGK-C protein; FAB frag 96.4 0.0036 1.2E-07 40.3 4.0 47 16-65 20-66 (254)
178 3liz_H 4C3 monoclonal antibody 96.4 0.0054 1.9E-07 40.3 5.0 51 17-67 96-155 (253)
179 3p2t_A Leukocyte immunoglobuli 96.4 0.0053 1.8E-07 38.3 4.7 49 16-65 74-127 (196)
180 2edk_A Myosin-binding protein 96.4 0.0017 5.6E-08 37.3 2.2 33 36-69 7-39 (101)
181 1za6_B IGG heavy chain; immuno 96.4 0.0026 9E-08 43.3 3.5 34 34-67 239-272 (344)
182 2va4_A NCAM2, N-CAM 2, neural 96.4 0.0024 8.3E-08 38.7 3.0 33 37-69 2-36 (192)
183 1iam_A ICAM-1, CD54, intercell 96.4 0.0048 1.6E-07 41.7 4.7 52 16-67 64-117 (185)
184 2a38_A Titin; Z1Z2, structural 96.4 0.003 1E-07 38.5 3.3 35 35-69 3-37 (194)
185 1lk3_L 9D7 light chain; antige 96.4 0.0039 1.3E-07 39.1 3.9 51 16-66 86-140 (210)
186 1i1c_A IGG2A, IG gamma-2A chai 96.4 0.0032 1.1E-07 41.9 3.7 52 16-67 98-153 (239)
187 1igy_B IGG1 intact antibody MA 96.4 0.0019 6.5E-08 45.2 2.6 51 16-66 311-365 (434)
188 3caf_A Fibroblast growth facto 96.3 0.0011 3.9E-08 37.4 1.2 26 44-69 15-40 (100)
189 1moe_A Anti-CEA MAB T84.66; an 96.3 0.0073 2.5E-07 38.4 5.1 51 16-66 91-148 (240)
190 2y23_A Myomesin; structural pr 96.3 0.0035 1.2E-07 40.7 3.6 53 16-69 74-140 (312)
191 1igy_B IGG1 intact antibody MA 96.3 0.0053 1.8E-07 43.0 4.6 52 16-67 94-150 (434)
192 2vr9_A Roundabout 1, ROBO; imm 96.3 0.0028 9.5E-08 39.5 2.9 35 35-69 7-41 (217)
193 1mju_H Immunoglobulin MS6-12; 96.3 0.0055 1.9E-07 39.7 4.4 51 17-67 96-152 (227)
194 2rcj_C Light chain; immunoglob 96.3 0.0026 9E-08 45.3 3.1 52 16-67 194-250 (523)
195 3m45_A Cell adhesion molecule 96.3 0.0034 1.1E-07 35.4 2.9 35 35-69 4-38 (108)
196 1ow0_A IG alpha-1 chain C regi 96.3 0.0058 2E-07 39.2 4.4 51 16-66 82-136 (214)
197 1bih_A Hemolin; insect immunit 96.3 0.0016 5.4E-08 44.0 1.7 38 32-69 1-39 (395)
198 2kkq_A Myotilin; unknown funct 96.3 0.0017 6E-08 38.7 1.7 36 34-69 12-47 (116)
199 4i0k_A CD276 antigen; immunogl 96.2 0.0018 6.2E-08 40.6 1.9 51 17-69 89-143 (222)
200 1hzh_H IGG, immunoglobulin hea 96.2 0.004 1.4E-07 43.8 3.8 52 16-67 330-385 (457)
201 1qok_A MFE-23 recombinant anti 96.2 0.01 3.4E-07 39.6 5.6 52 17-69 122-193 (282)
202 1nfd_E H57 FAB; complex (immun 96.2 0.001 3.4E-08 41.7 0.6 40 27-66 99-143 (212)
203 2c1o_A IGK-C protein; FAB frag 96.2 0.0053 1.8E-07 39.5 4.0 51 17-67 130-184 (254)
204 3cx2_A Myosin-binding protein 96.2 0.0026 8.9E-08 37.1 2.3 29 38-66 5-33 (108)
205 2zg1_A Sialic acid-binding IG- 96.2 0.0033 1.1E-07 39.1 2.9 39 28-69 114-159 (214)
206 1svz_A Immunoglobulin;, single 96.2 0.009 3.1E-07 38.4 5.1 49 16-65 92-155 (247)
207 3ry4_A Low affinity immunoglob 96.1 0.006 2.1E-07 36.7 3.7 49 17-68 68-117 (170)
208 3oq3_B IFN-alpha/beta binding 96.1 0.0021 7.2E-08 43.4 1.8 54 16-69 106-161 (329)
209 3sob_L Antibody light chain; b 96.1 0.0036 1.2E-07 39.4 2.7 51 16-66 110-164 (237)
210 3p3y_A Neurofascin; IG domains 96.1 0.0024 8.3E-08 43.0 1.9 54 16-69 93-149 (404)
211 3bqu_C 3H6 FAB light chain; be 96.1 0.0026 8.9E-08 40.4 1.9 51 17-67 110-164 (233)
212 3ux9_B SCFV antibody; five hel 96.0 0.0076 2.6E-07 39.0 4.1 48 17-65 91-162 (256)
213 2znx_A SCFV; fluorotryptohpan, 96.0 0.012 4.1E-07 38.2 5.1 49 16-65 87-150 (242)
214 2ckn_A Basic fibroblast growth 96.0 0.0016 5.6E-08 37.1 0.8 31 37-68 9-39 (95)
215 2nzi_A Titin; IG-domain, FNIII 96.0 0.0075 2.6E-07 39.3 4.1 34 36-69 3-36 (305)
216 2xqy_G A13-D6.3 monoclonal ant 96.0 0.0083 2.9E-07 40.4 4.4 51 17-67 102-160 (261)
217 2wv3_A Neuroplastin; igcam, me 96.0 0.0062 2.1E-07 37.4 3.4 32 35-66 1-32 (190)
218 2fbj_H IGA-kappa J539 FAB (hea 96.0 0.0063 2.2E-07 39.1 3.5 49 17-66 96-152 (220)
219 2dku_A KIAA1556 protein; beta- 96.0 0.0038 1.3E-07 35.6 2.2 32 37-69 8-39 (103)
220 2c5d_C AXL oncogene, tyrosine- 96.0 0.012 4.1E-07 36.1 4.6 33 37-69 2-35 (195)
221 1fnl_A Low affinity immunoglob 95.9 0.0078 2.7E-07 37.0 3.7 35 34-68 4-38 (175)
222 1gl4_B Basement membrane-speci 95.9 0.0088 3E-07 33.8 3.6 33 37-69 9-43 (98)
223 2ifg_A High affinity nerve gro 95.9 0.0051 1.7E-07 42.1 3.1 43 27-69 148-190 (347)
224 2e6p_A Obscurin-like protein 1 95.9 0.0024 8.3E-08 36.5 1.2 32 36-67 6-40 (104)
225 2aty_A Complement receptor chi 95.9 0.0058 2E-07 43.1 3.3 51 16-66 249-303 (376)
226 4fqp_A Poliovirus receptor; im 95.8 0.017 5.7E-07 38.3 5.1 53 17-69 96-150 (313)
227 2v5m_A Dscam; neurobiology SPL 95.8 0.0027 9.2E-08 42.9 1.3 51 16-66 81-132 (388)
228 1dn0_B IGM-kappa cold agglutin 95.8 0.015 5.1E-07 37.9 4.6 41 27-67 111-157 (232)
229 3qhz_H Human monoclonal antibo 95.7 0.021 7.2E-07 36.6 5.3 42 26-67 117-162 (232)
230 1qgc_4 Protein (immunoglobulin 95.7 0.013 4.3E-07 40.3 4.4 49 16-65 197-246 (438)
231 1hzh_H IGG, immunoglobulin hea 95.7 0.012 4.2E-07 41.3 4.4 40 27-66 118-162 (457)
232 3omz_A Human vdelta1 gamma del 95.7 0.0092 3.1E-07 38.9 3.5 52 17-68 96-168 (259)
233 2if7_A SLAM family member 6; N 95.7 0.014 5E-07 36.9 4.3 52 16-69 86-142 (193)
234 2dlt_A Myosin binding protein 95.7 0.004 1.4E-07 35.9 1.6 32 36-67 7-38 (106)
235 4acp_A IG gamma-1 chain C regi 95.7 0.0093 3.2E-07 40.3 3.6 52 16-67 105-161 (240)
236 1waa_A Titin; metal binding pr 95.7 0.017 5.9E-07 33.6 4.3 33 36-69 4-36 (93)
237 2bk8_A Connectin, M1, titin he 95.7 0.011 3.9E-07 33.2 3.4 30 40-69 4-34 (97)
238 2y23_A Myomesin; structural pr 95.6 0.013 4.4E-07 38.1 3.8 32 35-67 220-251 (312)
239 4dzb_B Vbeta2 (MAIT T cell rec 95.6 0.01 3.6E-07 38.0 3.3 51 17-67 94-155 (246)
240 2gki_A Nuclease; anti-DNA anti 95.6 0.011 3.8E-07 39.8 3.6 40 28-67 134-189 (291)
241 1f97_A Junction adhesion molec 95.6 0.0081 2.8E-07 36.7 2.7 33 37-69 1-33 (212)
242 1rhf_A Tyrosine-protein kinase 95.6 0.01 3.5E-07 35.9 3.1 33 37-69 2-34 (182)
243 2eny_A Obscurin; beta-sandwich 95.6 0.0085 2.9E-07 35.2 2.6 31 37-67 8-38 (104)
244 2w59_A IGY FCU3-4; immunoglobu 95.6 0.018 6E-07 37.6 4.4 51 16-66 93-147 (231)
245 1mq8_A ICAM-1, intercellular a 95.5 0.0018 6.2E-08 46.0 -0.5 40 25-67 175-218 (291)
246 3bkj_L WO2 IGG2A FAB fragment 95.5 0.011 3.7E-07 38.4 3.2 51 17-67 126-180 (252)
247 4fmk_A Poliovirus receptor-rel 95.5 0.0043 1.5E-07 37.8 1.2 30 32-68 3-32 (225)
248 1iga_A IGA1; immunoglobulin; N 95.5 0.014 4.7E-07 41.5 3.9 51 16-66 325-379 (475)
249 1igt_B IGG2A intact antibody - 95.4 0.02 6.7E-07 40.0 4.6 51 17-67 96-154 (444)
250 2yuv_A Myosin-binding protein 95.4 0.015 5.2E-07 33.1 3.4 32 37-69 7-39 (100)
251 3kld_A Contactin 4, axcam, BIG 95.4 0.023 7.9E-07 39.2 4.9 36 34-69 201-237 (384)
252 3auv_A SC-DSFV derived from th 95.4 0.02 6.9E-07 37.9 4.4 50 16-65 98-162 (276)
253 1x44_A Myosin-binding protein 95.4 0.0079 2.7E-07 34.5 2.1 32 37-69 7-38 (103)
254 3o4o_C Interleukin-1 receptor 95.4 0.0066 2.3E-07 40.4 2.0 54 16-69 97-157 (339)
255 1cs6_A Axonin-1; neural cell a 95.4 0.0069 2.3E-07 40.9 2.1 35 35-69 2-39 (382)
256 2j6e_L IGM, FAB light chain; a 95.4 0.0012 3.9E-08 41.9 -1.6 51 17-67 108-165 (234)
257 2gi7_A GPVI protein; IG-like d 95.4 0.013 4.4E-07 36.5 3.2 49 17-66 69-122 (184)
258 4dep_C Interleukin-1 receptor 95.4 0.0058 2E-07 40.9 1.7 54 16-69 95-157 (349)
259 1bec_A 14.3.D T cell antigen r 95.4 0.011 3.7E-07 38.3 2.9 40 28-67 105-152 (238)
260 1f2q_A High affinity immunoglo 95.4 0.0041 1.4E-07 38.2 0.8 34 34-67 1-34 (176)
261 4f80_A Butyrophilin subfamily 95.4 0.026 8.8E-07 35.8 4.6 52 16-69 99-151 (226)
262 1oll_A NK receptor; immune sys 95.3 0.02 6.7E-07 35.8 3.9 48 17-65 74-126 (188)
263 2dm7_A KIAA1556 protein; beta- 95.3 0.0082 2.8E-07 34.5 1.9 30 36-65 7-36 (108)
264 3vh8_G Killer cell immunoglobu 95.3 0.016 5.4E-07 38.6 3.5 50 16-67 190-247 (316)
265 3nl4_L Antigen binding fragmen 95.2 0.025 8.5E-07 35.2 4.0 32 38-69 2-33 (213)
266 2k1m_A Myosin-binding protein 95.2 0.014 4.7E-07 33.1 2.6 31 38-69 9-39 (95)
267 2ny1_B T-cell surface glycopro 95.2 0.02 6.7E-07 35.1 3.5 46 16-69 84-129 (184)
268 4frw_A Poliovirus receptor-rel 95.2 0.053 1.8E-06 32.7 5.4 47 23-69 103-150 (218)
269 3rjd_A High affinity immunoglo 95.2 0.015 5.2E-07 36.8 3.0 31 37-67 1-31 (262)
270 3r06_A Anti-mouse CD3epsilon a 95.2 0.029 9.8E-07 34.9 4.2 32 38-69 2-33 (213)
271 3o3u_N Maltose-binding peripla 95.1 0.032 1.1E-06 40.3 5.0 53 16-69 448-505 (581)
272 1jhl_L IGG1-kappa D11.15 FV (l 95.1 0.03 1E-06 32.4 4.0 29 41-69 5-33 (108)
273 4f80_A Butyrophilin subfamily 95.1 0.03 1E-06 35.5 4.2 26 42-67 9-34 (226)
274 2v5t_A NCAM2, N-CAM 2, neural 95.1 0.015 5.2E-07 35.0 2.7 33 37-69 2-34 (189)
275 3nfj_J T cell receptor beta ch 95.0 0.014 4.9E-07 37.4 2.7 41 26-66 106-153 (245)
276 3bn9_D E2 FAB heavy chain; ant 95.0 0.0075 2.6E-07 40.9 1.4 40 28-67 120-164 (257)
277 2jll_A NCAM2, neural cell adhe 95.0 0.026 8.9E-07 38.0 4.0 32 37-69 1-32 (389)
278 1epf_A NCAM, protein (neural c 95.0 0.025 8.6E-07 34.3 3.5 32 37-68 2-34 (191)
279 3esu_F Antibody 14B7* light ch 94.9 0.022 7.6E-07 36.5 3.4 48 17-65 91-159 (250)
280 1wio_A CD4, T-cell surface gly 94.9 0.018 6.2E-07 39.0 3.1 40 16-68 271-312 (363)
281 3ry4_A Low affinity immunoglob 94.9 0.02 6.8E-07 34.4 2.9 30 37-66 4-33 (170)
282 1iga_A IGA1; immunoglobulin; N 94.9 0.015 5.3E-07 41.3 2.7 51 16-66 206-276 (475)
283 1uct_A Immunoglobulin alpha FC 94.9 0.02 6.9E-07 37.3 3.1 51 16-67 80-135 (218)
284 3bn3_B ICAM-5, intercellular a 94.8 0.016 5.5E-07 39.6 2.6 48 17-66 68-118 (196)
285 3pl6_D MBP peptide / T-cell re 94.8 0.019 6.6E-07 37.4 2.9 51 17-67 117-176 (268)
286 1pd6_A Cardiac MYBP-C;, myosin 94.8 0.02 6.9E-07 33.7 2.7 34 35-69 13-47 (104)
287 1ccz_A Protein (CD58); LFA-3, 94.8 0.028 9.6E-07 35.4 3.5 44 16-69 76-122 (171)
288 1nkr_A P58-CL42 KIR; inhibitor 94.8 0.047 1.6E-06 34.2 4.5 38 26-64 94-134 (201)
289 2q20_A VK1 O18/O8 germline lig 94.8 0.044 1.5E-06 32.0 4.1 31 39-69 5-35 (109)
290 2yuz_A Myosin-binding protein 94.7 0.011 3.7E-07 34.7 1.3 31 37-69 7-37 (100)
291 3m8o_H Immunoglobulin A1 heavy 94.7 0.057 2E-06 34.1 4.8 49 17-66 98-153 (221)
292 3tf7_C 42F3 MUT7 SCFV (42F3 al 94.7 0.035 1.2E-06 36.2 3.9 29 36-64 136-164 (256)
293 3sgj_C Human FCG3A receptor; r 94.6 0.025 8.6E-07 36.3 3.1 33 36-68 6-38 (204)
294 3ojm_B Fibroblast growth facto 94.6 0.011 3.6E-07 36.7 1.2 36 34-69 12-51 (231)
295 1itb_B Type 1 interleukin-1 re 94.6 0.0091 3.1E-07 39.2 0.9 54 16-69 78-141 (315)
296 3vh8_G Killer cell immunoglobu 94.5 0.072 2.5E-06 35.4 5.2 41 24-65 103-146 (316)
297 2gi7_A GPVI protein; IG-like d 94.5 0.031 1.1E-06 34.7 3.1 34 33-68 4-37 (184)
298 1f2q_A High affinity immunoglo 94.4 0.045 1.5E-06 33.4 3.7 50 16-68 67-117 (176)
299 4ei6_B Vbeta16 XV19 type II na 94.4 0.029 9.9E-07 35.8 2.9 43 24-66 104-153 (245)
300 3k0w_A Mucosa-associated lymph 94.3 0.024 8.3E-07 35.9 2.4 35 35-69 16-50 (218)
301 1nbq_A JAM, junctional adhesio 94.3 0.014 5E-07 35.5 1.3 33 37-69 4-36 (209)
302 2cpc_A KIAA0657 protein; immun 94.3 0.054 1.9E-06 31.0 3.6 22 47-69 23-44 (113)
303 3mj8_L Stimulatory hamster ant 94.3 0.025 8.7E-07 35.1 2.3 31 38-69 2-32 (213)
304 2gjj_A A21 single-chain antibo 94.2 0.1 3.5E-06 34.5 5.4 50 17-66 98-167 (264)
305 1z9m_A GAPA225; nectin-like, I 94.2 0.021 7.2E-07 34.7 1.9 42 28-69 28-70 (145)
306 2v5y_A Receptor-type tyrosine- 94.2 0.083 2.8E-06 39.9 5.4 46 23-69 148-196 (731)
307 3q5y_A TCR N15 beta; IG, T cel 94.2 0.041 1.4E-06 35.1 3.2 43 25-67 103-153 (240)
308 3mjg_X Beta-type platelet-deri 94.1 0.023 8E-07 36.8 2.0 53 16-69 67-126 (289)
309 3u2s_H PG9 heavy chain; greek 94.1 0.11 3.7E-06 34.5 5.3 39 28-66 128-170 (248)
310 3rbs_A Myomesin-1; immunoglobu 94.1 0.055 1.9E-06 35.0 3.7 32 37-69 117-149 (207)
311 2lu7_A Obscurin-like protein 1 94.0 0.023 7.8E-07 32.8 1.7 24 45-69 4-27 (84)
312 3s96_B 3B5H10 FAB light chain; 94.0 0.053 1.8E-06 33.6 3.5 31 38-69 2-33 (218)
313 3n9g_H FAB fragment of MAB CR4 94.0 0.11 3.8E-06 33.4 5.2 39 28-66 115-157 (230)
314 3fku_X Neutralizing antibody F 94.0 0.054 1.8E-06 36.2 3.7 37 26-63 114-165 (280)
315 1qfw_M FV, antibody (anti beta 93.9 0.068 2.3E-06 31.1 3.7 29 40-68 4-32 (108)
316 1vca_A VCAM-D1,2, human vascul 93.9 0.066 2.3E-06 34.2 3.9 24 46-69 10-33 (202)
317 4fom_A Poliovirus receptor-rel 93.9 0.099 3.4E-06 34.2 4.7 54 16-69 90-147 (308)
318 3mlr_H Human monoclonal anti-H 93.8 0.16 5.4E-06 32.8 5.6 39 28-66 116-158 (226)
319 3d9a_L Light chain of hyhel10 93.8 0.079 2.7E-06 32.8 4.0 30 40-69 4-33 (213)
320 2e27_L Anti-ciguatoxin antibod 93.8 0.085 2.9E-06 31.7 4.0 29 40-68 6-34 (119)
321 3omz_A Human vdelta1 gamma del 93.8 0.015 5.2E-07 37.8 0.7 33 37-69 2-34 (259)
322 1lk2_B Beta-2-microglobulin; c 93.8 0.12 4E-06 30.9 4.6 30 36-67 3-33 (99)
323 2y25_A Myomesin; structural pr 93.7 0.061 2.1E-06 34.9 3.5 35 34-69 4-39 (317)
324 3qib_D 2B4 beta chain; IG doma 93.7 0.047 1.6E-06 35.7 2.9 42 26-67 131-180 (270)
325 1x9q_A SCFV, 4M5.3 anti-fluore 93.7 0.1 3.5E-06 34.2 4.6 21 46-66 160-180 (268)
326 1i8k_A Epidermal growth factor 93.7 0.093 3.2E-06 30.4 3.9 29 40-68 4-32 (107)
327 1hnf_A CD2; T lymphocyte adhes 93.6 0.059 2E-06 34.8 3.3 46 16-69 82-132 (182)
328 1mq8_A ICAM-1, intercellular a 93.6 0.045 1.5E-06 38.7 2.9 50 16-67 64-116 (291)
329 1gxe_A Myosin binding protein 93.6 0.019 6.6E-07 36.3 0.9 24 46-69 27-50 (139)
330 1k5n_B Beta-2-microglobulin, l 93.6 0.13 4.5E-06 30.7 4.6 30 36-67 4-34 (100)
331 3tv3_H PGT128 heavy chain, IG 93.5 0.14 4.8E-06 33.3 5.0 39 28-66 127-169 (239)
332 1oga_E TRBC1, T-cell receptor 93.5 0.05 1.7E-06 35.5 2.8 39 29-67 108-154 (252)
333 2dru_A Chimera of CD48 antigen 93.5 0.064 2.2E-06 34.0 3.2 45 16-69 85-132 (180)
334 3s35_X Vascular endothelial gr 93.5 0.08 2.7E-06 30.7 3.4 22 46-67 17-38 (122)
335 1ugn_A LIR1, leukocyte immunog 93.4 0.07 2.4E-06 33.1 3.3 31 35-66 3-33 (198)
336 3esu_F Antibody 14B7* light ch 93.4 0.076 2.6E-06 33.9 3.5 30 40-69 7-36 (250)
337 2d3v_A Leukocyte immunoglobuli 93.4 0.066 2.2E-06 33.3 3.1 31 35-66 3-33 (196)
338 3sob_L Antibody light chain; b 93.3 0.12 4.1E-06 32.3 4.2 33 37-69 24-56 (237)
339 1mqk_L Antibody 7E2 FV fragmen 93.3 0.12 4E-06 31.1 4.0 29 41-69 5-33 (120)
340 2vsd_A CHIR AB1; immune system 93.2 0.063 2.2E-06 31.6 2.7 30 35-65 3-32 (105)
341 3p2t_A Leukocyte immunoglobuli 93.2 0.071 2.4E-06 33.1 3.0 30 36-67 4-33 (196)
342 2znx_A SCFV; fluorotryptohpan, 93.2 0.11 3.8E-06 33.5 4.1 31 39-69 3-33 (242)
343 2ywz_A NEW antigen receptor va 93.1 0.15 5E-06 29.9 4.2 25 40-64 3-27 (111)
344 1i3g_L Antibody FV fragment; a 93.0 0.12 4.2E-06 30.2 3.8 29 40-68 7-35 (111)
345 2wbj_D OB TCR; transmembrane, 93.0 0.046 1.6E-06 36.2 2.1 39 28-66 134-179 (279)
346 4dzb_B Vbeta2 (MAIT T cell rec 93.0 0.13 4.3E-06 32.8 4.1 31 39-69 3-33 (246)
347 3nfj_J T cell receptor beta ch 93.0 0.12 4.3E-06 32.9 4.0 30 40-69 4-33 (245)
348 3rbg_A Cytotoxic and regulator 92.9 0.044 1.5E-06 32.6 1.7 26 44-69 8-33 (124)
349 1zvo_C Myeloma immunoglobulin 92.9 0.13 4.6E-06 37.5 4.6 49 16-67 377-431 (512)
350 3f8u_B Tapasin; endoplasmic re 92.7 0.13 4.3E-06 39.0 4.3 51 17-67 271-323 (401)
351 1eaj_A Coxsackie virus and ade 92.4 0.059 2E-06 30.5 1.7 28 40-67 8-35 (126)
352 1hxm_B Gamma-delta T-cell rece 92.3 0.067 2.3E-06 34.7 2.1 39 28-66 115-162 (242)
353 1bii_B Beta-2 microglobulin, M 92.3 0.24 8.3E-06 30.9 4.6 32 35-68 22-54 (119)
354 3auv_A SC-DSFV derived from th 92.3 0.18 6.1E-06 33.3 4.1 33 37-69 12-44 (276)
355 4ffy_L DENV1-E111 single chain 92.3 0.2 6.9E-06 30.0 4.1 28 38-65 2-29 (126)
356 4frw_A Poliovirus receptor-rel 92.2 0.062 2.1E-06 32.4 1.7 23 46-68 8-30 (218)
357 3mj6_A Junctional adhesion mol 92.1 0.059 2E-06 34.5 1.6 49 16-69 100-153 (268)
358 4gos_A V-SET domain-containing 92.1 0.11 3.6E-06 31.7 2.7 29 38-66 6-34 (125)
359 2rgs_A I, IG gamma-2B heavy ch 92.0 0.061 2.1E-06 34.5 1.6 31 35-65 7-39 (218)
360 2ghw_B Anti-SARS SCFV antibody 92.0 0.21 7.1E-06 31.8 4.1 27 38-65 4-30 (247)
361 1oll_A NK receptor; immune sys 92.0 0.14 4.8E-06 31.8 3.2 29 36-65 3-31 (188)
362 3to4_D NKT vbeta2 (mouse varia 91.9 0.096 3.3E-06 34.0 2.5 40 28-67 108-155 (253)
363 3sob_H Antibody heavy chain, l 91.9 0.38 1.3E-05 31.4 5.4 39 28-66 141-183 (256)
364 2yz1_A Tyrosine-protein phosph 91.8 0.11 3.9E-06 30.4 2.5 28 40-67 10-38 (120)
365 1ntl_A CRRY-IG; immunology, co 91.8 0.21 7.3E-06 37.2 4.5 44 24-67 434-479 (551)
366 3tf7_C 42F3 MUT7 SCFV (42F3 al 91.7 0.1 3.5E-06 34.0 2.5 32 38-69 4-35 (256)
367 3bp6_B Programmed cell death 1 91.7 0.096 3.3E-06 32.3 2.2 27 40-66 5-31 (202)
368 3bqu_C 3H6 FAB light chain; be 91.7 0.09 3.1E-06 33.1 2.1 33 37-69 23-55 (233)
369 3grw_A Fibroblast growth facto 91.6 0.081 2.8E-06 33.2 1.8 26 44-69 22-47 (241)
370 1l6x_A Immunoglobulin gamma-1 91.6 0.11 3.6E-06 32.9 2.3 29 37-65 1-31 (207)
371 2fbo_J V1V2;, variable region- 91.5 0.12 4.2E-06 32.4 2.6 29 41-69 6-37 (250)
372 1lk3_L 9D7 light chain; antige 91.5 0.21 7.1E-06 31.0 3.6 25 45-69 8-32 (210)
373 3p73_B Beta-2-microglobulin; I 91.4 0.34 1.2E-05 28.9 4.4 30 37-68 4-34 (99)
374 2wqr_A IG epsilon chain C regi 91.4 0.039 1.3E-06 37.0 0.1 52 16-67 88-144 (323)
375 2v44_A NCAM2, neural cell adhe 91.3 0.33 1.1E-05 29.3 4.4 27 40-66 5-31 (189)
376 2e6q_A Obscurin-like protein 1 91.2 0.28 9.6E-06 30.2 4.0 28 38-65 9-36 (112)
377 1sq2_N Novel antigen receptor; 91.2 0.3 1E-05 28.8 4.0 26 40-65 3-28 (113)
378 3zyj_A Leucine-rich repeat-con 91.0 0.098 3.4E-06 37.2 2.0 33 36-69 340-372 (440)
379 1uct_A Immunoglobulin alpha FC 91.0 0.094 3.2E-06 34.1 1.7 32 34-67 6-37 (218)
380 1p6f_A NKP46, natural cytotoxi 91.0 0.31 1.1E-05 32.4 4.3 39 26-65 88-129 (242)
381 2dav_A SLOW MYBP-C, myosin-bin 90.9 0.1 3.5E-06 33.2 1.8 25 45-69 15-42 (126)
382 1moe_A Anti-CEA MAB T84.66; an 90.8 0.21 7.3E-06 31.5 3.2 27 39-65 3-29 (240)
383 3sbw_C Programmed cell death 1 90.8 0.15 5.3E-06 31.4 2.5 26 42-67 6-31 (222)
384 3bkj_L WO2 IGG2A FAB fragment 90.8 0.31 1.1E-05 31.4 4.0 29 37-65 34-62 (252)
385 1pko_A Myelin oligodendrocyte 90.7 0.28 9.5E-06 29.2 3.5 24 43-66 12-35 (139)
386 2id5_A Lingo-1, leucine rich r 90.6 0.062 2.1E-06 38.2 0.6 32 38-69 385-417 (477)
387 3iu4_H CHP3 FAB heavy chain; a 90.6 0.45 1.5E-05 31.9 4.8 39 28-66 114-156 (263)
388 2ny1_B T-cell surface glycopro 90.5 0.083 2.8E-06 32.2 1.0 26 44-69 2-27 (184)
389 3juy_B 3B3 single chain varian 90.5 0.3 1E-05 31.5 3.7 28 37-64 6-33 (256)
390 1j05_L T84.66 antibody, anti-C 90.4 0.37 1.3E-05 27.9 3.8 26 40-65 4-29 (111)
391 2wbj_D OB TCR; transmembrane, 90.3 0.21 7E-06 33.0 2.9 32 37-68 24-55 (279)
392 1b6u_A KIR2DL3, P58 killer cel 90.3 0.19 6.5E-06 34.1 2.8 39 26-65 93-134 (257)
393 1eeq_A Kappa-4 immunoglobulin 90.1 0.45 1.5E-05 27.7 4.0 26 40-65 4-29 (114)
394 2coq_A NEW antigen receptor va 90.1 0.43 1.5E-05 27.6 3.9 25 40-64 3-27 (108)
395 2eo1_A OBSCN protein, cDNA FLJ 90.0 0.091 3.1E-06 29.6 0.8 24 45-69 19-42 (102)
396 2yc1_B Single chain antibody f 89.9 0.46 1.6E-05 30.2 4.3 31 37-67 16-46 (146)
397 1h5b_A Murine T cell receptor 89.8 0.45 1.5E-05 27.6 3.8 25 41-65 5-29 (113)
398 1nkr_A P58-CL42 KIR; inhibitor 89.7 0.32 1.1E-05 30.3 3.3 32 34-67 5-36 (201)
399 1svz_A Immunoglobulin;, single 89.6 0.41 1.4E-05 30.5 3.8 26 40-65 4-29 (247)
400 3pv7_A B7-H6, IG-like domain-c 89.6 0.23 7.8E-06 31.6 2.6 23 46-68 12-34 (248)
401 1nez_G T-cell surface glycopro 89.6 0.6 2E-05 28.6 4.5 29 37-65 4-32 (128)
402 2edn_A Myosin-binding protein 89.6 0.12 4E-06 32.5 1.2 25 45-69 20-47 (118)
403 3o81_A Beta-2-microglobulin; I 89.5 0.57 2E-05 29.2 4.4 35 33-69 20-55 (119)
404 1ypz_F T-cell receptor gamma c 89.5 0.14 4.8E-06 33.1 1.5 40 28-67 111-161 (230)
405 2p1y_A Bispecific alpha/beta T 89.4 0.36 1.2E-05 30.4 3.4 29 40-69 3-31 (238)
406 2jju_A Signal regulatory prote 89.4 0.23 7.9E-06 29.7 2.4 24 45-68 11-35 (127)
407 2gjj_A A21 single-chain antibo 89.3 0.33 1.1E-05 32.0 3.3 28 38-65 6-33 (264)
408 1i1c_A IGG2A, IG gamma-2A chai 89.0 0.17 5.7E-06 33.5 1.7 31 37-67 15-50 (239)
409 3jts_B Beta-2-microglobulin; a 89.0 0.72 2.5E-05 28.7 4.6 33 34-68 21-54 (119)
410 3jz7_A MCAR, CAR, coxsackievir 88.9 0.14 4.7E-06 31.1 1.1 28 40-67 3-30 (214)
411 1hxm_B Gamma-delta T-cell rece 88.9 0.54 1.8E-05 30.3 4.0 26 39-64 3-28 (242)
412 2x1w_L Vascular endothelial gr 88.8 0.15 5E-06 32.2 1.2 33 36-69 6-40 (213)
413 3udw_C Poliovirus receptor; PV 88.7 0.3 1E-05 27.4 2.4 21 47-67 10-31 (118)
414 1x9q_A SCFV, 4M5.3 anti-fluore 88.6 0.44 1.5E-05 31.1 3.5 30 36-65 14-43 (268)
415 3moq_A NEW antigen receptor va 88.5 0.65 2.2E-05 28.7 4.1 26 39-64 2-27 (126)
416 3r4d_A CEA-related cell adhesi 88.5 0.2 6.9E-06 30.6 1.7 29 41-69 3-31 (208)
417 3tv3_L PGT128 light chain, IG 88.3 0.26 8.7E-06 30.5 2.1 27 40-69 4-30 (211)
418 1zxq_A ICAM-2, intercellular a 88.3 0.5 1.7E-05 32.3 3.7 50 17-68 67-120 (192)
419 1xt5_A Variable region-contain 88.2 0.34 1.1E-05 28.3 2.5 21 43-63 10-30 (135)
420 1q0x_L FAB 9B1, light chain; a 88.1 0.58 2E-05 28.9 3.7 22 45-66 8-29 (212)
421 1jbj_A CD3 epsilon and gamma e 88.1 0.1 3.5E-06 32.7 0.2 17 50-69 120-136 (186)
422 4ei6_B Vbeta16 XV19 type II na 88.1 0.43 1.5E-05 30.2 3.1 30 38-68 3-32 (245)
423 1dlf_L Anti-dansyl immunoglobu 87.9 0.72 2.5E-05 26.8 3.8 25 41-65 5-29 (113)
424 2d9c_A Signal-regulatory prote 87.9 0.41 1.4E-05 28.7 2.8 21 44-64 15-35 (136)
425 4hwn_A FC receptor-like A; FCR 87.8 0.38 1.3E-05 28.3 2.6 31 35-66 6-36 (108)
426 4fmk_A Poliovirus receptor-rel 87.5 2.5 8.5E-05 25.3 6.2 52 17-68 100-153 (225)
427 3q5y_A TCR N15 beta; IG, T cel 87.4 0.41 1.4E-05 30.4 2.7 28 39-67 4-31 (240)
428 3umt_A SCFV heavy chain and li 87.3 0.72 2.5E-05 29.7 3.9 26 39-65 5-30 (256)
429 1f3r_B FV antibody fragment; I 87.1 0.89 3E-05 29.4 4.3 25 40-65 4-28 (257)
430 4gjt_B Poliovirus receptor-rel 87.0 0.31 1.1E-05 29.0 1.9 22 46-67 9-30 (123)
431 4fa8_A Secreted protein BARF1; 87.0 0.14 4.8E-06 33.3 0.3 24 46-69 2-28 (203)
432 1p6f_A NKP46, natural cytotoxi 86.9 0.57 1.9E-05 31.1 3.3 29 34-63 4-32 (242)
433 1gsm_A Madcam-1, mucosal addre 86.8 0.55 1.9E-05 31.9 3.3 22 45-67 15-36 (210)
434 3gbl_A BETA2-microglobulin; im 86.8 0.8 2.7E-05 27.1 3.6 30 36-66 3-32 (97)
435 2z35_A T-cell receptor alpha-c 86.8 0.41 1.4E-05 27.8 2.3 24 44-67 7-30 (112)
436 2vol_A Murine IGG FC; FC, zinc 86.7 0.4 1.4E-05 30.2 2.3 28 38-65 2-31 (207)
437 1nfd_E H57 FAB; complex (immun 86.7 0.38 1.3E-05 29.7 2.2 24 46-69 8-31 (212)
438 1sy6_A T-cell surface glycopro 86.7 0.42 1.4E-05 30.5 2.5 18 50-69 126-143 (204)
439 3c5j_B MHC class II antigen; H 86.6 0.75 2.6E-05 29.7 3.7 34 33-67 92-126 (190)
440 3u1s_H FAB PGT145 heavy chain; 86.5 1 3.5E-05 29.9 4.4 38 29-66 156-197 (267)
441 2w59_A IGY FCU3-4; immunoglobu 86.4 0.27 9.2E-06 31.9 1.4 30 37-66 12-43 (231)
442 1u3h_A T-cell receptor alpha-c 86.3 0.14 4.8E-06 29.9 0.0 25 45-69 7-31 (110)
443 1uvq_B HLA class II histocompa 86.1 0.79 2.7E-05 29.9 3.6 32 34-66 91-123 (198)
444 1fo0_B Protein (BM3.3 T cell r 86.1 0.84 2.9E-05 26.7 3.5 27 40-66 4-30 (112)
445 1zvo_C Myeloma immunoglobulin 85.8 0.86 2.9E-05 33.2 4.0 40 28-67 121-166 (512)
446 2cr3_A Basic fibroblast growth 85.5 0.16 5.6E-06 28.8 0.1 22 46-68 12-33 (99)
447 2bnu_A TCR alpha chain, T-cell 85.5 1.3 4.4E-05 28.7 4.4 35 30-69 107-147 (203)
448 3ux9_B SCFV antibody; five hel 85.4 0.47 1.6E-05 30.4 2.2 24 46-69 11-36 (256)
449 1oaq_L Light chain; antibody, 85.3 0.86 2.9E-05 26.8 3.2 25 40-65 4-28 (120)
450 3gkz_A Anti-methamphetamine si 85.3 0.94 3.2E-05 29.0 3.7 21 45-65 16-36 (257)
451 3b5h_A Cervical EMMPRIN, HAB18 85.0 1.4 4.6E-05 26.5 4.1 18 50-67 11-28 (184)
452 3c5j_A HLA class II histocompa 84.6 1.3 4.3E-05 28.9 4.1 34 32-66 81-115 (181)
453 3s97_C Contactin-1; carbonic a 84.4 0.21 7.2E-06 30.0 0.2 27 43-69 14-42 (201)
454 3s6c_A Beta-2-microglobulin, T 84.4 1 3.5E-05 33.1 3.9 34 34-69 1-35 (392)
455 2bc4_B HLA class II histocompa 84.4 1.4 4.6E-05 29.1 4.2 36 32-68 91-126 (211)
456 2fbj_H IGA-kappa J539 FAB (hea 84.2 1.3 4.6E-05 28.0 3.9 20 46-65 9-28 (220)
457 3r0n_A Poliovirus receptor-rel 84.2 0.71 2.4E-05 26.9 2.5 22 46-67 11-32 (128)
458 3to4_D NKT vbeta2 (mouse varia 84.2 0.85 2.9E-05 29.5 3.0 27 43-69 7-33 (253)
459 1op3_H FAB 2G12, heavy chain; 84.0 0.96 3.3E-05 28.7 3.2 20 46-65 9-28 (225)
460 3khq_A B-cell antigen receptor 83.9 1.4 4.8E-05 26.9 3.9 26 39-64 19-44 (133)
461 1tvd_A T cell receptor, ES204 83.4 0.85 2.9E-05 26.5 2.6 23 42-64 5-27 (116)
462 3qib_D 2B4 beta chain; IG doma 83.4 0.81 2.8E-05 29.7 2.7 26 38-63 28-53 (270)
463 3uto_A Twitchin; kinase, muscl 83.4 1.5 5.1E-05 33.4 4.5 37 33-69 478-514 (573)
464 3t0v_A Immunoglobulin variable 83.3 0.8 2.7E-05 27.9 2.5 27 38-65 2-28 (123)
465 1k5n_A Major histocompatibilit 83.3 1.7 5.7E-05 30.1 4.4 31 36-69 183-213 (276)
466 3mj6_A Junctional adhesion mol 83.2 0.43 1.5E-05 30.4 1.3 42 16-57 217-259 (268)
467 1ow0_A IG alpha-1 chain C regi 83.2 0.19 6.6E-06 32.0 -0.4 30 37-66 3-33 (214)
468 1n4x_H Immunoglobulin heavy ch 83.2 1.8 6.3E-05 25.2 4.0 19 46-64 9-27 (120)
469 1a2y_B IGG1-kappa D1.3 FV (hea 83.0 1.4 4.9E-05 25.6 3.5 25 40-65 4-28 (116)
470 1p4b_L Antibody variable light 83.0 0.94 3.2E-05 28.0 2.8 26 39-65 8-33 (135)
471 1lp9_E T-cell receptor alpha c 82.9 1.8 6.3E-05 27.9 4.3 35 30-69 108-148 (194)
472 2oyp_A Hepatitis A virus cellu 82.8 0.5 1.7E-05 26.4 1.3 22 46-67 3-24 (109)
473 3kgr_A LAIR-1, hlair1, leukocy 82.8 1.8 6.2E-05 25.3 3.9 28 34-62 6-33 (106)
474 1ncn_A T lymphocyte activation 82.5 0.55 1.9E-05 26.8 1.5 22 46-67 3-24 (110)
475 1fo0_A Protein (BM3.3 T cell r 82.5 0.74 2.5E-05 26.9 2.1 21 44-64 7-27 (116)
476 3u6r_L Antibody 1:7 (light cha 82.5 1.8 6.1E-05 27.2 4.0 27 40-66 3-29 (143)
477 1c1e_H Catalytic antibody 1E9 82.3 1.1 3.7E-05 27.8 2.9 19 47-65 10-28 (219)
478 1nqb_A Single-chain antibody f 82.3 1.3 4.4E-05 28.9 3.4 20 46-65 9-28 (256)
479 3r08_E T-cell surface glycopro 82.3 0.37 1.3E-05 28.8 0.6 19 48-66 10-28 (82)
480 3q0h_A T cell immunoreceptor w 82.2 1.5 5E-05 25.9 3.4 26 37-63 4-29 (117)
481 2i24_N NEW antigen receptor PB 82.0 1.9 6.3E-05 26.1 3.8 25 40-64 3-27 (121)
482 1mju_H Immunoglobulin MS6-12; 81.8 1.4 4.7E-05 28.2 3.3 20 46-65 9-28 (227)
483 3b9v_A Heavy chain variable do 81.8 2.4 8.3E-05 24.7 4.2 24 40-64 4-27 (120)
484 2atp_B T-cell surface glycopro 81.8 1.2 4.1E-05 25.8 2.8 21 44-64 5-25 (115)
485 1uvq_A HLA class II histocompa 81.6 1.9 6.4E-05 28.7 4.0 35 32-67 84-119 (197)
486 3uzq_A Anti-dengue MAB 4E11; d 81.5 1.3 4.6E-05 28.3 3.2 22 44-65 8-29 (253)
487 3s35_X Vascular endothelial gr 81.4 0.45 1.5E-05 27.4 0.8 29 16-44 90-118 (122)
488 1onq_A T-cell surface glycopro 81.3 2 6.9E-05 30.0 4.3 30 36-67 185-215 (283)
489 1pew_A JTO2, A lambda-6 type i 81.2 1.4 4.9E-05 25.3 3.0 21 45-65 8-29 (109)
490 3pl6_D MBP peptide / T-cell re 81.2 0.59 2E-05 30.2 1.4 26 37-62 26-51 (268)
491 3r8b_B G5-8, enterotoxin type 81.2 2.2 7.5E-05 25.5 3.9 27 39-65 7-33 (125)
492 2ak4_D SB27 T cell receptor al 80.8 2.7 9.4E-05 27.5 4.6 35 30-69 111-151 (211)
493 2xt1_B Camelid VHH 9; viral pr 80.8 2.5 8.4E-05 25.2 4.0 20 46-65 11-30 (121)
494 2yc1_A Single chain antibody f 80.7 2.6 9E-05 24.3 4.0 19 46-64 9-27 (117)
495 1j05_H T84.66 antibody, anti-C 80.5 2.5 8.7E-05 24.7 4.0 20 46-65 9-28 (121)
496 3zyi_A Leucine-rich repeat-con 80.4 0.3 1E-05 34.8 -0.3 31 37-69 352-382 (452)
497 3tpk_A Immunoglobulin heavy ch 80.3 2.3 7.9E-05 26.3 3.9 29 36-64 2-31 (136)
498 2pet_A Lutheran blood group gl 80.1 0.4 1.4E-05 29.6 0.3 20 47-66 10-29 (231)
499 2otu_A FV light chain variable 79.9 2.2 7.5E-05 24.8 3.5 20 45-64 9-28 (115)
500 3noi_A Natural cytotoxicity tr 79.7 1.1 3.9E-05 26.2 2.2 20 46-65 16-35 (120)
No 1
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.39 E-value=2.3e-07 Score=61.43 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=49.8
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+....++..+.|.|..||.+....+.+...+|..++|.|.+.|.|.|.|
T Consensus 85 ~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v 138 (203)
T 4fa8_A 85 LCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHV 138 (203)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEE
T ss_pred EEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEE
Confidence 488888888899999999999999999988888899999999999999999975
No 2
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.37 E-value=7.7e-07 Score=55.36 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=47.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. ...+..+.|.|.++|.|......+....|..++|.|.+.+.|.+.|
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i 124 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEW 124 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEE
T ss_pred EEEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCce
Confidence 4777777 6788999999999999999887788899999999999999998864
No 3
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.34 E-value=5.3e-08 Score=58.46 Aligned_cols=42 Identities=19% Similarity=0.291 Sum_probs=38.0
Q ss_pred eeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 26 VRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 26 vs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
..+.+.|+|++||.|.. ...+.+.+|..+.|.|.+.+.|.|.
T Consensus 3 ~~~~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~ 44 (122)
T 2cry_A 3 SGSSGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPD 44 (122)
T ss_dssp SSCCCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCS
T ss_pred cceEEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCc
Confidence 45788999999999999 6778889999999999999999986
No 4
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.29 E-value=1.4e-06 Score=53.48 Aligned_cols=52 Identities=17% Similarity=0.139 Sum_probs=45.1
Q ss_pred hcCcCCC-ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+. +...+..+.|.|.++|.|......+....|..++|.|.+.+.|.+
T Consensus 76 ~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p 128 (182)
T 1rhf_A 76 WCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEP 128 (182)
T ss_dssp EEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSC
T ss_pred EEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCC
Confidence 4777766 345778999999999999998777888999999999999999988
No 5
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.22 E-value=9.1e-07 Score=60.06 Aligned_cols=54 Identities=17% Similarity=0.178 Sum_probs=48.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+....+++.+.|+|.++|.|..+...+.+..|..+.|.|.+.+.|.+.|
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i 132 (389)
T 2jll_A 79 DCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASI 132 (389)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEE
T ss_pred EEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeE
Confidence 488888877889999999999999998888778899999999999999998764
No 6
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.19 E-value=2.4e-06 Score=57.99 Aligned_cols=54 Identities=7% Similarity=-0.051 Sum_probs=48.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.+||.+....+.+....|..++|.|.+.+.|.+.|
T Consensus 286 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 339 (388)
T 2v5m_A 286 LCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 339 (388)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEECCCEE
T ss_pred EEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEeccccCCeE
Confidence 588888888889999999999999998888888899999999999999998864
No 7
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.19 E-value=1.3e-06 Score=56.94 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=48.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.+||.|......+....|..++|.|.+.+.|.+.|
T Consensus 171 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v 224 (284)
T 2rik_A 171 TCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQV 224 (284)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEE
T ss_pred EEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEE
Confidence 477888878889999999999999998877788899999999999999998764
No 8
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.17 E-value=1.9e-06 Score=58.35 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=48.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....++.+.|.|.++|.|......+....|..++|.|.+.+.|.+.|
T Consensus 291 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v 344 (404)
T 3p3y_A 291 FCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTV 344 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEE
T ss_pred EEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCCce
Confidence 488888888899999999999999998877788889999999999999998865
No 9
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.12 E-value=3.8e-06 Score=52.21 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=43.9
Q ss_pred hcCcCCCcc-ceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC-CC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA-DP 69 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a-~V 69 (70)
.|.+.+... ..+..+.|.|.++|.|......+....|..++|.|.+.+.|.+ .|
T Consensus 84 ~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v 139 (195)
T 2c5d_C 84 QCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDL 139 (195)
T ss_dssp EEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEE
T ss_pred EEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEE
Confidence 466666544 3455599999999999988777788899999999999999988 54
No 10
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.12 E-value=4.1e-06 Score=56.77 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=45.2
Q ss_pred hcCcCCCcccee-eeEEEEeecCCeEEEecce-EEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVR-RRRRRNQKNLPEIEVERSW-VHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs-~~I~L~V~ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+...... ..+.|.|.++|.|.....- +....|..++|.|.+.+.|.+.|
T Consensus 286 ~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 341 (395)
T 1bih_A 286 TCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNV 341 (395)
T ss_dssp EEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEESCCCC
T ss_pred EEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECcccCCee
Confidence 477777655544 4999999999999987554 77789999999999999999876
No 11
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.11 E-value=2.2e-06 Score=52.84 Aligned_cols=51 Identities=24% Similarity=0.178 Sum_probs=42.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeC-CCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEP-HADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P-~a~V 69 (70)
.|.+.+ ..+..+.|+|+|+|.|...........|..++|.|.+.+.| .+.|
T Consensus 65 ~C~~~n---~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i 116 (184)
T 3b5h_A 65 SCVFLP---EPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDW 116 (184)
T ss_dssp EEEEES---TTSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEE
T ss_pred EEEEEC---CcCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeE
Confidence 366665 23478999999999999998888889999999999999999 5654
No 12
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.10 E-value=1.9e-06 Score=58.53 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=49.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....++.+.|.|.+||.+....+.+....|..++|.|.+.+.|.+.|
T Consensus 291 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v 344 (403)
T 3laf_A 291 TCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVPTV 344 (403)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEESCCEE
T ss_pred EEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeeccCCEE
Confidence 488888888899999999999999999888888999999999999999999864
No 13
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.09 E-value=3.2e-06 Score=52.03 Aligned_cols=54 Identities=11% Similarity=-0.021 Sum_probs=46.7
Q ss_pred hcCcCCCc-cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDK-EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~-~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.. ...++.+.|.|.++|.+......+....|..++|.|.+.+.|.+.|
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 132 (191)
T 1epf_A 78 KCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132 (191)
T ss_dssp EEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEE
T ss_pred EEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEE
Confidence 46666654 6788999999999999998887888899999999999999998864
No 14
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.09 E-value=2.3e-06 Score=52.90 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=45.8
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec-----ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER-----SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~-----~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.++|.+..+. ..+....|..++|.|.+.+.|.+.|
T Consensus 78 ~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i 136 (197)
T 2j8h_A 78 QVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVI 136 (197)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEE
T ss_pred EEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcE
Confidence 47777777778999999999999997765 4566788999999999999998864
No 15
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.06 E-value=4.5e-06 Score=61.24 Aligned_cols=54 Identities=15% Similarity=0.171 Sum_probs=49.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.|....++..+.|.|.+||.+......+.+..|..++|.|.+.+.|.+.|
T Consensus 363 ~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v 416 (570)
T 3b43_A 363 TCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQV 416 (570)
T ss_dssp EEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCC
T ss_pred EEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEE
Confidence 588899988999999999999999998877888899999999999999999876
No 16
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.02 E-value=1e-06 Score=50.89 Aligned_cols=42 Identities=14% Similarity=0.190 Sum_probs=26.1
Q ss_pred eeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 28 RRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 28 ~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+++.|.|.++|.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 1 ~~~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i 42 (108)
T 3kvq_A 1 RQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQI 42 (108)
T ss_dssp ----------CCCBSCCCCEEEETTCCEEEECBCC----CCE
T ss_pred CceeECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeE
Confidence 467899999999999988899999999999999999998865
No 17
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=97.97 E-value=8.5e-06 Score=50.03 Aligned_cols=54 Identities=11% Similarity=0.052 Sum_probs=46.8
Q ss_pred hcCcCCCccceeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+........+.|.|. +||.|......+....|..++|.|.+.+.|.+.|
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 135 (194)
T 2a38_A 79 SLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVV 135 (194)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEE
T ss_pred EEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeE
Confidence 47777777777888899998 8999998888888899999999999999998864
No 18
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=97.96 E-value=7.3e-06 Score=54.70 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=40.1
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEec-ceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVER-SWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
-|.+++. ..+.+..+.|.|+|||.|.+.. +......|..++|.|.+.|.|.|.
T Consensus 193 ~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~ 248 (313)
T 4fqp_A 193 TCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPT 248 (313)
T ss_dssp EEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCC
T ss_pred EEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCc
Confidence 3666654 3456778899999999998763 333345688999999999999883
No 19
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.96 E-value=4.6e-06 Score=55.38 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=45.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec-ceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER-SWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
-|.+.+.....++.+.|+|.|+|.|.+.. +......|..++|.|.+.+.|.+.
T Consensus 210 ~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 263 (331)
T 3u83_A 210 ACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPAT 263 (331)
T ss_dssp EEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCC
T ss_pred EEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCC
Confidence 48888888889999999999999998654 334467899999999999999986
No 20
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=97.96 E-value=8.1e-06 Score=50.28 Aligned_cols=54 Identities=13% Similarity=0.058 Sum_probs=44.3
Q ss_pred hcCcCCC-ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. +...++.+.|.|.++|.+....+-.....|..++|.|.+.+.|.+.|
T Consensus 74 ~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 128 (189)
T 2v44_A 74 RCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 128 (189)
T ss_dssp EEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEE
T ss_pred EEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcE
Confidence 4666665 34448899999999999987666677789999999999999998864
No 21
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=97.95 E-value=1.1e-05 Score=51.00 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=45.8
Q ss_pred hcCcCCCccc-eeeeEEEEeecC-------CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKNL-------PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~yp-------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.... .+..+.|.|.++ |.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 81 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i 142 (212)
T 2yd1_A 81 ECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNI 142 (212)
T ss_dssp EEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEE
T ss_pred EEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeE
Confidence 4777766555 889999999998 88988877778889999999999999998864
No 22
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=97.93 E-value=1.5e-05 Score=50.58 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=45.7
Q ss_pred hcCcCCCccceeeeEEEEeecC-------CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNL-------PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~yp-------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.++ |.|....+......|..++|.|.+.+.|.+.|
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v 140 (212)
T 2yd6_A 80 ECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEI 140 (212)
T ss_dssp EEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred EEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeE
Confidence 4777777777889999999886 78888766677788999999999999998865
No 23
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=97.93 E-value=1.4e-05 Score=48.77 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=44.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+......+.+.|.|.++|.|....+. ....|..++|.|.+.++|.+.|
T Consensus 74 ~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~g~~v~l~C~~~~~p~~~v 126 (192)
T 2va4_A 74 VCRATNKAGEDEKQAFLQVFVQPHIIQLKNE-TTYENGQVTLVCDAEGEPIPEI 126 (192)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEEEECCE-EECTTSEEEEEEEEEEESCCEE
T ss_pred EEEEEccccccceEEEEEEEccCcccccCcc-eEEeCCeEEEEEEecCCCCCcE
Confidence 4777777777889999999999999877654 3456999999999999998864
No 24
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=97.91 E-value=9e-06 Score=56.40 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=49.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.++|....+.....|.|.++|.+....+-+....|..++|.|.+.+.|.+.|
T Consensus 274 ~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i 327 (384)
T 3kld_A 274 ECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTY 327 (384)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEE
T ss_pred EEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeE
Confidence 588999888899999999999999988877888899999999999999999865
No 25
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=97.91 E-value=9.3e-06 Score=55.11 Aligned_cols=54 Identities=17% Similarity=0.139 Sum_probs=48.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.++|.+.....-+....|..++|.|.+.+.|.+.|
T Consensus 273 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 326 (382)
T 1cs6_A 273 ECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAV 326 (382)
T ss_dssp EEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEE
T ss_pred EEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEE
Confidence 477888777889999999999999988877778899999999999999999865
No 26
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=97.89 E-value=1.2e-05 Score=49.27 Aligned_cols=54 Identities=20% Similarity=0.151 Sum_probs=44.8
Q ss_pred hcCcCCC-ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. +...+..+.|.|.++|.|......+....|..++|.|.+.+.|.+.|
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 132 (192)
T 2iep_A 78 CCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSV 132 (192)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred EEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceE
Confidence 3666554 34467889999999999999877788889999999999999998864
No 27
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.87 E-value=9.3e-06 Score=46.44 Aligned_cols=38 Identities=18% Similarity=0.147 Sum_probs=34.1
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.|.+||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 6 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 43 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRI 43 (99)
T ss_dssp SCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCC
T ss_pred CCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeE
Confidence 45789999999888888999999999999999999875
No 28
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=97.84 E-value=7e-06 Score=47.13 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=34.2
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|..+|.|..+.+.+...+|..+.|.|.+.+.|.+.|
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i 40 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEV 40 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEE
T ss_pred CCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEE
Confidence 46788999999988888999999999999999999865
No 29
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=97.84 E-value=2.6e-05 Score=57.19 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=49.8
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.++|....++....|.|.+||.|....+-+.+..|..++|.|.+.+.|.+.|
T Consensus 456 ~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v 509 (570)
T 3b43_A 456 QCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEGAEPISV 509 (570)
T ss_dssp EEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEESCSSCCC
T ss_pred EEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEecCCCCEE
Confidence 589999988999999999999999998888888899999999999999999876
No 30
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=97.84 E-value=1.2e-05 Score=52.75 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=46.6
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec-----ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER-----SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~-----~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+....+++.+.|.|.++|.|..+. ..+....|..+.|.|.+.+.|.+.|
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i 136 (305)
T 2nzi_A 78 QVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVI 136 (305)
T ss_dssp EEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEE
T ss_pred EEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEE
Confidence 48888887788999999999999998765 4567788999999999999998864
No 31
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.83 E-value=4.8e-05 Score=54.32 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=47.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec---ceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER---SWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~---~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.|.+.+.....+..+.|.|.++|.|.... +.+...+|..++|.|.+.++|.+.
T Consensus 289 ~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~ 344 (524)
T 2ec8_A 289 MCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE 344 (524)
T ss_dssp EEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCC
T ss_pred EEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCc
Confidence 58888888888899999999999998864 368889999999999999999987
No 32
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=97.83 E-value=1.8e-05 Score=57.24 Aligned_cols=51 Identities=10% Similarity=-0.119 Sum_probs=43.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec--ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER--SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~--~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.++|. .++.+.|+|.++|.|.... ..+...+|..+.|.|.+.|+|.|.|
T Consensus 306 ~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i 358 (423)
T 3qs7_E 306 TCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRC 358 (423)
T ss_dssp EEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEE
T ss_pred EEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeE
Confidence 4888887 8899999999999988653 5677889999999999999999865
No 33
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=97.83 E-value=8.2e-06 Score=50.96 Aligned_cols=45 Identities=16% Similarity=0.130 Sum_probs=36.7
Q ss_pred ceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 25 EVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 25 pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-......|.|.+||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 29 ~~~~~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v 73 (154)
T 1fhg_A 29 FLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEV 73 (154)
T ss_dssp -----CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred eeeehhcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEE
Confidence 344556788999999999988899999999999999999999865
No 34
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=97.82 E-value=7.8e-06 Score=48.20 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=33.9
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..|.+||.|....+.+.+..|..++|.|.+.+.|.+.|
T Consensus 4 ~~~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v 41 (117)
T 2v9t_A 4 RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI 41 (117)
T ss_dssp CCCCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEE
T ss_pred ccccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeE
Confidence 35789999999888888899999999999999999865
No 35
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.80 E-value=3.5e-05 Score=50.00 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=45.9
Q ss_pred hcCcC-CCccceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 16 EEEPE-KDKEEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 16 ~~~~~-~~~~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
-|.+. +.....++.+.|.|. ++|.|...........|..++|.|.+.+ .|.+.|
T Consensus 160 ~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 219 (289)
T 3ejj_X 160 VCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNV 219 (289)
T ss_dssp EEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEE
T ss_pred EEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEE
Confidence 47777 667778899999999 8999999987777789999999999999 687754
No 36
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.79 E-value=3.5e-05 Score=48.33 Aligned_cols=53 Identities=15% Similarity=0.019 Sum_probs=40.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+ +...++.+.|.|..||..-..........|..++|.|.+.++|.+.|
T Consensus 96 ~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i 148 (222)
T 3sbw_C 96 RCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEV 148 (222)
T ss_dssp EEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEE
T ss_pred EEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeE
Confidence 477877 55678899999998886543332235678999999999999998865
No 37
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=97.79 E-value=1.7e-05 Score=59.69 Aligned_cols=54 Identities=13% Similarity=0.061 Sum_probs=48.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-|.+.+.....+..+.|.|.+||.|....+-+....|..++|.|.+.+.|.+.|
T Consensus 693 ~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i 746 (816)
T 3dmk_A 693 TCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQV 746 (816)
T ss_dssp EEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEE
T ss_pred EEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCCCCeE
Confidence 588888888899999999999999998877777789999999999999999865
No 38
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.78 E-value=1.4e-05 Score=49.22 Aligned_cols=54 Identities=9% Similarity=-0.110 Sum_probs=44.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
.|.+.+.....++.+.|+|.++|.+...........|..++|.|.+ .+.|.+.|
T Consensus 100 ~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v 154 (214)
T 3jz7_A 100 QCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQF 154 (214)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEE
T ss_pred EEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEE
Confidence 4777777777799999999999998766555557889999999999 89998865
No 39
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=97.77 E-value=1.8e-05 Score=48.84 Aligned_cols=54 Identities=11% Similarity=-0.032 Sum_probs=43.1
Q ss_pred hcCcCCCc--cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEE-EeeeCCCCC
Q psy15736 16 EEEPEKDK--EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCI-VHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~--~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~Ci-V~A~P~a~V 69 (70)
.|.+.+.. ...++.+.|.|.++|.+.....-.....|..++|.|. +.+.|.+.|
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 137 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEY 137 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEE
T ss_pred EEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEE
Confidence 46666553 3678899999999999876655566788999999999 799998864
No 40
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=97.76 E-value=2.7e-05 Score=47.56 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=45.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEe---cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVE---RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~---~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+........+.|.|.++|.+... ...+....|..+.|.|.+.+.|.+.|
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v 135 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAM 135 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEE
T ss_pred EEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCee
Confidence 4778877778899999999999998753 34566688999999999999999865
No 41
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.76 E-value=2.4e-05 Score=51.31 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=43.0
Q ss_pred hcCcCCCccc-eeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.|.+.+.+.. .++.+.|+|. ++|.|....+-....+|..++|.|.+.+.|.+.
T Consensus 162 ~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~ 219 (290)
T 2o26_X 162 RCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSV 219 (290)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTC
T ss_pred EEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcce
Confidence 4677766554 3556888887 899998886666889999999999999999885
No 42
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=97.76 E-value=3.4e-05 Score=50.10 Aligned_cols=54 Identities=17% Similarity=0.091 Sum_probs=42.7
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. +...++.+.|.|.++|.|..... -+....|..++|.|.+.+.|.+.|
T Consensus 171 ~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i 228 (291)
T 1qz1_A 171 RCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTM 228 (291)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEE
T ss_pred EEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCcE
Confidence 3666543 44567889999999999988654 446688999999999999999864
No 43
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.73 E-value=4.8e-06 Score=54.54 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=41.9
Q ss_pred hcCcC----CCccceeeeEEEEeecCCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPE----KDKEEVRRRRRRNQKNLPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~----~~~~pvs~~I~L~V~ypPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.++ |.....+..+.|+|+|+|.+..... -+...+|..++|.|.+.+.|.+.|
T Consensus 158 ~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i 217 (265)
T 2oz4_A 158 SCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPEL 217 (265)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEE
T ss_pred EEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeE
Confidence 46665 3333445889999999999976642 556678999999999999999865
No 44
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=97.73 E-value=2.4e-05 Score=50.61 Aligned_cols=50 Identities=12% Similarity=0.082 Sum_probs=39.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCe-EEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPE-IEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPe-I~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.....++.+.|.|.++|. +.+..+ ....+|..++|.|.+.+.|.
T Consensus 70 ~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p 120 (202)
T 1vca_A 70 LCTATCESRKLEKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYP 120 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBS
T ss_pred EEEEEECCceEeeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCC
Confidence 488888888889999999999875 344433 55678999999999998643
No 45
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=97.72 E-value=9.5e-06 Score=55.87 Aligned_cols=50 Identities=12% Similarity=-0.042 Sum_probs=42.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....++.+.|.|.+||.| .......|..++|.|.+.|.|.|.|
T Consensus 229 ~C~a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i 278 (347)
T 2ifg_A 229 TCWAENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSL 278 (347)
T ss_dssp EECCEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEE
T ss_pred EEEEEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcE
Confidence 5788888888899999999999998 2233457999999999999999865
No 46
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=97.72 E-value=1.1e-05 Score=45.84 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=31.9
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.+||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 2 ~~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v 37 (100)
T 2kdg_A 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDV 37 (100)
T ss_dssp CCEEEECCCCCCCEEEETTCCEEEEEECEEESCCEE
T ss_pred CCCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEE
Confidence 568999988877888899999999999999998865
No 47
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.71 E-value=3.2e-06 Score=59.00 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=43.6
Q ss_pred hcCcCCCcc----ceeeeEEEEeecCCeEEEec--ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKE----EVRRRRRRNQKNLPEIEVER--SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~----pvs~~I~L~V~ypPeI~v~~--~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+++... ..+..+.|+|+|+|.|.... +-+...+|..++|.|.+.|.|.|.|
T Consensus 343 ~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i 402 (450)
T 1z7z_I 343 SCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPEL 402 (450)
T ss_dssp EEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEE
T ss_pred EEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCCCCcE
Confidence 377763222 45688999999999998875 5667789999999999999999875
No 48
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=97.71 E-value=6.9e-05 Score=48.66 Aligned_cols=54 Identities=6% Similarity=-0.002 Sum_probs=44.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.++|.+... .+......|..++|.|.+.+.|.+.|
T Consensus 77 ~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v 131 (284)
T 2rik_A 77 TCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKV 131 (284)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEE
T ss_pred EEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEE
Confidence 4777777777899999999999997765 44555678999999999999998764
No 49
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=97.70 E-value=3.2e-05 Score=51.23 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=47.1
Q ss_pred hcCcCCCccceeeeEEEEeecC-------CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNL-------PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~yp-------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|+|.++ |.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v 140 (304)
T 2yd9_A 80 ECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEI 140 (304)
T ss_dssp EEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEE
T ss_pred EEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeE
Confidence 4788887777899999999987 88888877788889999999999999998864
No 50
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=1.5e-05 Score=47.29 Aligned_cols=49 Identities=14% Similarity=0.133 Sum_probs=37.0
Q ss_pred CCccceeeeEEE---EeecCCeEEEe---cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 21 KDKEEVRRRRRR---NQKNLPEIEVE---RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 21 ~~~~pvs~~I~L---~V~ypPeI~v~---~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.|......| .|..+|.|.++ .+.+....|..+.|.|.+.+.|.+.|
T Consensus 2 G~s~p~~~~~~v~~~~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i 56 (118)
T 2e7c_A 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQV 56 (118)
T ss_dssp CCCCCCCCCCCCCCCCCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEE
T ss_pred CcCCccccCCCEEEEeeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEE
Confidence 344444444444 67789999874 46677789999999999999999865
No 51
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.66 E-value=3.4e-05 Score=50.39 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=42.1
Q ss_pred hcCcCC-CccceeeeEEEEeec--CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEK-DKEEVRRRRRRNQKN--LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~-~~~pvs~~I~L~V~y--pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+ .+...+..+.|.|.+ +|.|.+..+-....+|..++|.|.+.+.|.+.|
T Consensus 157 ~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v 213 (289)
T 3mjg_X 157 ICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNF 213 (289)
T ss_dssp EEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEE
T ss_pred EEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcce
Confidence 366763 344456667888887 899998866666789999999999999998764
No 52
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=97.64 E-value=4.3e-05 Score=46.48 Aligned_cols=53 Identities=17% Similarity=0.115 Sum_probs=41.5
Q ss_pred cCcCCC--ccceeeeEEEEeecCCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 17 EEPEKD--KEEVRRRRRRNQKNLPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 17 ~~~~~~--~~pvs~~I~L~V~ypPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.+. +...++.+.|.|.++|.+..... .+....|..++|.|.+.+.|.+.|
T Consensus 74 C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v 130 (189)
T 2v5t_A 74 CEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAI 130 (189)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEE
T ss_pred EEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeE
Confidence 555443 44556789999999999988754 456678999999999999998864
No 53
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=97.64 E-value=5.9e-05 Score=48.97 Aligned_cols=54 Identities=11% Similarity=-0.021 Sum_probs=45.3
Q ss_pred hcCcCCCc-cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDK-EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~-~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.. ...++.+.|+|..+|.+......+...+|..+.|.|.+.+.|.+.|
T Consensus 78 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v 132 (291)
T 1qz1_A 78 KCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTI 132 (291)
T ss_dssp EEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEE
T ss_pred EEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEE
Confidence 46666654 5677899999999999998877777889999999999999998764
No 54
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.61 E-value=8.6e-05 Score=46.64 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=44.4
Q ss_pred hcCcCCCc-cceeeeEEEEeecC---CeEEEecceEEeccCCcE-EEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKDK-EEVRRRRRRNQKNL---PEIEVERSWVHSGEGYEA-QLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~-~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a-~L~CiV-~A~P~a~V 69 (70)
.|.+.+.. ...+..+.|.|.++ |.|....+.+....|..+ +|.|.+ .+.|.+.|
T Consensus 93 ~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i 152 (231)
T 2pet_A 93 VCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKI 152 (231)
T ss_dssp EEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEE
T ss_pred EEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEE
Confidence 47776665 77889999999998 567777777777889988 999999 99999865
No 55
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=97.61 E-value=3.7e-05 Score=55.53 Aligned_cols=53 Identities=13% Similarity=0.078 Sum_probs=39.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+....++..+.|+|.++|.|...++.+. ..|..+.|.|.+.+.|.|.|
T Consensus 119 ~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~-~~~~~~~L~C~a~G~P~P~i 171 (423)
T 3qs7_E 119 LLFIQSEATNYTILFTVSIRNTLLYTLRRPYFR-KMENQDALVCISESVPEPIV 171 (423)
T ss_dssp EEEEEC--CEEEEEEEEEEC-----CEEEEEEE-ECSSSSCEEEEEEESSCCEE
T ss_pred EEEEEcCCCcEEEEEEEEEecCccccccCCcEe-ccCCceEEEEEEeeecCCeE
Confidence 478888888899999999999999977777665 45888999999999999875
No 56
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.58 E-value=9.6e-05 Score=46.14 Aligned_cols=53 Identities=13% Similarity=-0.085 Sum_probs=39.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....++.+.|+|..+|..- .-.......|..++|.|.+.++|.+.|
T Consensus 83 ~C~~~~~~~~~~~~~~l~V~~~~~~p-~~~~~~~~~g~~v~l~C~~~g~P~p~v 135 (202)
T 3bp6_B 83 RCLVICGAAWDYKYLTVKVKASYMRI-DTRILEVPGTGEVQLTCQARGYPLAEV 135 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCCCE-EEEEEECTTTCCEEEEEEEEEBSCCEE
T ss_pred EEEEEeCCCcceEEEEEEecCCCCcc-cEEEEecCCCCeEEEEEEccccCCceE
Confidence 47777777777899999999875211 111234578999999999999999865
No 57
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.57 E-value=5e-05 Score=54.64 Aligned_cols=54 Identities=9% Similarity=0.013 Sum_probs=46.8
Q ss_pred hcCcCCCccce----eeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEV----RRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pv----s~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.+... ++.+.|.|.++|.|....+.+...+|..++|.|.+.+.|.+.+
T Consensus 306 ~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i 363 (585)
T 2ocw_A 306 LCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSI 363 (585)
T ss_pred EEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccE
Confidence 47788876655 3899999999999998888888899999999999999998864
No 58
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=4.5e-05 Score=44.14 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.9
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|+|.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 41 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDL 41 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEE
Confidence 58999999988899999999999999999998864
No 59
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=97.56 E-value=5.1e-05 Score=44.53 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=36.8
Q ss_pred CccceeeeEEEEee-cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 22 DKEEVRRRRRRNQK-NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 22 ~~~pvs~~I~L~V~-ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
++...+....|+|. .||.|....+.+.+.+|..++|.|.+.+.|
T Consensus 3 s~g~~~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p 47 (113)
T 2edh_A 3 SGSSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKMA 47 (113)
T ss_dssp CCCCCCCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSCC
T ss_pred CCCCCcEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCCC
Confidence 45667788899999 556998887788899999999999998764
No 60
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=97.56 E-value=5.9e-05 Score=49.92 Aligned_cols=54 Identities=9% Similarity=0.016 Sum_probs=40.8
Q ss_pred hcCcCCCcccee---eeEEEEe-ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVR---RRRRRNQ-KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs---~~I~L~V-~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+...... ..+.|.| .++|.|......+....|..++|.|.+.+.|.+.|
T Consensus 180 ~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 237 (304)
T 2yd9_A 180 ECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYV 237 (304)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEE
T ss_pred EEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEE
Confidence 366666554443 4455555 48999998877777889999999999999999865
No 61
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=97.55 E-value=2.4e-05 Score=50.80 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=42.4
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. +...++.+.|.|.+||.|..... .+....|..++|.|.+.+.|.+.|
T Consensus 169 ~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 226 (291)
T 2wim_A 169 RCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAI 226 (291)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEE
T ss_pred EEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeE
Confidence 3655543 34466889999999999988754 345678999999999999998864
No 62
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=97.51 E-value=7.1e-05 Score=42.51 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=29.8
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|..+...+....|..+.|.|.+.+.|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i 34 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTA 34 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEE
Confidence 788888877888999999999999999999865
No 63
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.49 E-value=5.6e-05 Score=44.79 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=29.2
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|....+-+...+|+.+.|.|.+.|.|.|.|
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v 37 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEV 37 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEE
Confidence 4788877766778889999999999999999875
No 64
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=97.49 E-value=9e-05 Score=41.94 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=30.5
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 37 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVV 37 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEE
Confidence 35788888877788899999999999999999865
No 65
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.48 E-value=7.8e-05 Score=53.22 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=42.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+++....+++.+.|.|.+||.|..... ...| +|.|.+.|.|.|.|
T Consensus 391 ~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~---~~~g---~l~C~~~g~P~p~i 438 (524)
T 2ec8_A 391 TFLVSNSDVNAAIAFNVYVNTKPEILTYDR---LVNG---MLQCVAAGFPEPTI 438 (524)
T ss_dssp EEEEECSSCEEEEEEEEEECEEEEEEEEEC---CSSS---CEEEEEEEESCCEE
T ss_pred EEEEEecCceEEEEEEEEEecCCeEeeccc---CcCc---EEEEEEEeecCCEE
Confidence 588899888899999999999999998876 3456 99999999999865
No 66
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.48 E-value=1.5e-05 Score=49.06 Aligned_cols=54 Identities=11% Similarity=0.005 Sum_probs=42.3
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
.|.+.+. ....+..+.|+|.++|.+...........|..++|.|.+ .+.|.+.|
T Consensus 84 ~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v 140 (209)
T 1nbq_A 84 TCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEY 140 (209)
T ss_dssp EEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEE
T ss_pred EEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCcee
Confidence 3555554 345678899999999998766555567889999999997 99998864
No 67
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=97.47 E-value=0.0001 Score=41.59 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=31.4
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+..||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 3 ~~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v 38 (99)
T 3puc_A 3 ISSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTA 38 (99)
T ss_dssp CCEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEE
T ss_pred CCCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEE
Confidence 456888888888888899999999999999998864
No 68
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=97.47 E-value=0.00016 Score=46.22 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=43.8
Q ss_pred hcCcCCC-ccceeeeEEEEeecC---------------CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNL---------------PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~yp---------------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-|.+.+. +...+..+.|.|.++ |.+......+....|..++|.|.+.+.|.+.|
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v 150 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHY 150 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEE
T ss_pred EEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeE
Confidence 3666655 344577899999988 78888877788899999999999999998864
No 69
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.44 E-value=3.2e-05 Score=51.11 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=39.9
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEec-ceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVER-SWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+. ..+.+..+.|+|+++|.|.+.. +......|..++|.|.+.|.|.+
T Consensus 188 ~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p 242 (308)
T 4fom_A 188 TCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPP 242 (308)
T ss_dssp EEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCE
T ss_pred EEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCC
Confidence 3666654 3456778999999999998763 33444668899999999999987
No 70
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.43 E-value=0.00031 Score=45.59 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=42.5
Q ss_pred hcCcCCCccc-eeeeEEEEeec----CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKN----LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~y----pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.+.. .+..+.|.|.+ +|.|....+......|..++|.|.+.+.|.+
T Consensus 160 ~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~ 216 (292)
T 4dkd_C 160 QCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVN 216 (292)
T ss_dssp EEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSC
T ss_pred EEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCc
Confidence 4777765554 46689999997 9999998777766799999999999998864
No 71
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=97.40 E-value=0.00017 Score=44.70 Aligned_cols=54 Identities=17% Similarity=0.113 Sum_probs=41.3
Q ss_pred hcCcCCCccceeeeEEEEeec---------------------CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN---------------------LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y---------------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+........+.|.|.. ||.+......+....|..++|.|.+.+.|.+.|
T Consensus 75 ~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v 149 (212)
T 2r15_A 75 VMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEV 149 (212)
T ss_dssp EEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEE
T ss_pred EEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceE
Confidence 477777777778888888773 444444455677788999999999999999865
No 72
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=97.40 E-value=0.00014 Score=45.62 Aligned_cols=54 Identities=7% Similarity=0.033 Sum_probs=40.4
Q ss_pred hcCcCCCcc---ceeeeEEEEe---ecCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 16 EEEPEKDKE---EVRRRRRRNQ---KNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~---pvs~~I~L~V---~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
.|.+.+... .....+.|.| ..+|.|.+..+......|..++|.|.+.+ .|.+.|
T Consensus 87 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v 147 (213)
T 3nl4_L 87 YCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTV 147 (213)
T ss_dssp EEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEE
T ss_pred EEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEE
Confidence 366666554 4556667777 78999988766555567999999999999 887654
No 73
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=97.38 E-value=6.2e-05 Score=44.44 Aligned_cols=33 Identities=12% Similarity=0.067 Sum_probs=26.6
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|+|||.|..-. ....|+.+.|.|.|.|.|.|.|
T Consensus 1 V~~pP~i~~~~---~~~~~~~~~~~c~v~G~P~P~i 33 (103)
T 1wwb_X 1 VHFAPTITFLE---SPTSDHHWCIPFTVKGNPKPAL 33 (103)
T ss_dssp CCCCCCCCCCC---CCCCCCEEEEEEEEECSSCCEE
T ss_pred CCCCCEEEecc---CceECcEEEEEEEEEEeCCCEE
Confidence 78999985322 2456899999999999999875
No 74
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.35 E-value=0.00012 Score=41.12 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=29.8
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v 37 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEV 37 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCce
Confidence 5788887777888899999999999999999865
No 75
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=97.35 E-value=5.2e-05 Score=44.91 Aligned_cols=37 Identities=11% Similarity=-0.013 Sum_probs=26.7
Q ss_pred EEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 30 RRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 30 I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|+|+|||.|...... ..+..+.|.|.+.|.|.+.|
T Consensus 1 v~L~V~~pP~i~~~~~~---~~~~~~~l~C~~~g~P~p~i 37 (118)
T 1wwc_A 1 VALTVYYPPRVVSLEEP---ELRLEHCIEFVVRGNPPPTL 37 (118)
T ss_dssp ---CCCCCCCCCCCCCC---CCCCEEEEEEEEECSSCCEE
T ss_pred CEEEEecCCceeccCCC---eeccceEEEEEeeeeCCCeE
Confidence 57999999998766332 23467899999999999865
No 76
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.34 E-value=0.00026 Score=45.64 Aligned_cols=51 Identities=14% Similarity=0.059 Sum_probs=37.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
.|.+.+......+.+.|.|..+|.|.+..... +..|..++|.|.+.+ .|.+
T Consensus 98 ~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~-~~~~~~~~L~C~~~g~~P~p 149 (248)
T 3pv7_A 98 RCEVVVTPLKAQGTVQLEVVASPASRLLLDQV-GMKENEDKYMCESSGFYPEA 149 (248)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSC
T ss_pred EEEEEeCCccceeEEEEEEecCCceEEecCCc-cccCCCcEEEEEEccEECCC
Confidence 37777777778899999999999999876643 356888999999999 7887
No 77
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.32 E-value=0.00019 Score=49.96 Aligned_cols=52 Identities=12% Similarity=-0.086 Sum_probs=42.9
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec-ceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER-SWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.+...++.+.|.|.++|.+.... +-+...+|+.++|.|.+.+.|.+
T Consensus 64 ~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~ 116 (450)
T 1z7z_I 64 MCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPR 116 (450)
T ss_dssp EEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCG
T ss_pred EEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCC
Confidence 47777777788899999999999988543 33566789999999999999876
No 78
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.32 E-value=0.00028 Score=46.55 Aligned_cols=43 Identities=19% Similarity=0.120 Sum_probs=35.2
Q ss_pred eeeEEEEee-----cCCeEEEecc-eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 27 RRRRRRNQK-----NLPEIEVERS-WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 27 s~~I~L~V~-----ypPeI~v~~~-~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
++.+.|.|. ++|.|..+.+ .+...+|..++|.|.+.+.|.+.|
T Consensus 193 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i 241 (315)
T 1itb_B 193 TRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIA 241 (315)
T ss_dssp EEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEE
T ss_pred EEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCee
Confidence 566666565 8999987755 467899999999999999999864
No 79
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=97.28 E-value=0.00022 Score=40.32 Aligned_cols=34 Identities=21% Similarity=0.263 Sum_probs=29.5
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 37 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPEC 37 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEE
Confidence 4788888777788899999999999999998865
No 80
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.28 E-value=0.00012 Score=43.48 Aligned_cols=41 Identities=15% Similarity=0.056 Sum_probs=33.7
Q ss_pred eEEEEeecCC-eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 29 RRRRNQKNLP-EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 29 ~I~L~V~ypP-eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
...|.|+.+| .|....+-+.+.+|+.++|.|.+.+.|.+.|
T Consensus 4 ~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 45 (115)
T 2cr6_A 4 GSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPV 45 (115)
T ss_dssp CCCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSC
T ss_pred cEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCcc
Confidence 3457788877 6777777788899999999999999998865
No 81
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=97.28 E-value=0.00056 Score=38.40 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=28.6
Q ss_pred EEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 30 RRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 30 I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+......+|.|....+.+.+..|..++|.|.+.+.|.
T Consensus 3 ~~c~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~ 39 (112)
T 3so5_A 3 FVCDDFPXPQITVQPETQSAIXGSDVSFTCSAASSSD 39 (112)
T ss_dssp -----CCSCEEEECCCCEEECTTCCEEEEEEEEESCC
T ss_pred eecCCCCCCeEEeCCCCcEEECCCCEEEEEEEecCCC
Confidence 3455678999999887788899999999999997764
No 82
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=97.27 E-value=0.00021 Score=42.96 Aligned_cols=33 Identities=30% Similarity=0.255 Sum_probs=28.2
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|...-+-+...+|+.+.|.|.+.|.|.+.|
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v 45 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVV 45 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEE
Confidence 677777666677889999999999999999875
No 83
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=97.27 E-value=0.00032 Score=44.28 Aligned_cols=50 Identities=10% Similarity=-0.002 Sum_probs=36.4
Q ss_pred cCcCCCccceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|.+.+.. .....+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 95 C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p 149 (210)
T 3d9a_H 95 CANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 149 (210)
T ss_dssp EEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSC
T ss_pred EEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCC
Confidence 6666542 23345677776 68898876644455789999999999998 876
No 84
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=97.27 E-value=0.00023 Score=52.09 Aligned_cols=54 Identities=9% Similarity=-0.020 Sum_probs=41.7
Q ss_pred hcCcCCCccc-eeeeEEEEeecCCe-EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKNLPE-IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~ypPe-I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.... .+..+.|+|.++|. +.+..+-+....|..++|.|.+.+.|.+.|
T Consensus 536 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v 591 (642)
T 1e07_A 536 VCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQY 591 (642)
T ss_pred EEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEeccCCCCeE
Confidence 4777766443 45679999999775 555555567788999999999999999865
No 85
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=97.23 E-value=0.00033 Score=41.32 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=32.2
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-.++|.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v 46 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTV 46 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBC
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEE
Confidence 357889988888899999999999999999999876
No 86
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.23 E-value=0.00027 Score=44.23 Aligned_cols=50 Identities=10% Similarity=0.064 Sum_probs=39.5
Q ss_pred cCcCCCcc---ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 17 EEPEKDKE---EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 17 ~~~~~~~~---pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.+.|.
T Consensus 87 C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p 143 (213)
T 3mj8_L 87 CQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYP 143 (213)
T ss_dssp EEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeC
Confidence 66666554 56788899999 8999998765555558999999999999744
No 87
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.22 E-value=0.00064 Score=45.05 Aligned_cols=52 Identities=8% Similarity=-0.133 Sum_probs=40.7
Q ss_pred hcCcCCCcc-----ceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKE-----EVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~-----pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+... .....+.|.|..+|.|....+.+...+|..++|.|.+.+.|.+
T Consensus 95 ~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 151 (256)
T 1nqb_A 95 YCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVH 151 (256)
T ss_dssp EEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBC
T ss_pred EEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccc
Confidence 366665521 2345689999999998887777788999999999999999875
No 88
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=97.22 E-value=0.00038 Score=44.06 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=41.8
Q ss_pred hcCcCCCccceeeeEEEEeec----CCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN----LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y----pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.+ +|.+... ...+....|..++|.|.+.+.|.+.|
T Consensus 88 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v 146 (241)
T 3grw_A 88 TCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHI 146 (241)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEE
T ss_pred EEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEE
Confidence 477777777788899999987 3444443 44566788999999999999998854
No 89
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.20 E-value=0.00029 Score=52.62 Aligned_cols=51 Identities=10% Similarity=-0.119 Sum_probs=41.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec--ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER--SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~--~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+++. .++.+.|+|.++|.|.... ..+...+|..+.|.|.+.|+|.|.|
T Consensus 306 ~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i 358 (527)
T 3qs9_E 306 TCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRC 358 (527)
T ss_dssp EEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEE
T ss_pred EEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCCCEE
Confidence 4778877 7899999999999987653 3466788999999999999999865
No 90
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.20 E-value=0.00033 Score=44.32 Aligned_cols=53 Identities=9% Similarity=-0.009 Sum_probs=38.1
Q ss_pred cCcCCCcc----ceeeeEEEEeecC----CeEEEecceEEeccCCcEEEEEEEee-eCCC-CC
Q psy15736 17 EEPEKDKE----EVRRRRRRNQKNL----PEIEVERSWVHSGEGYEAQLVCIVHA-EPHA-DP 69 (70)
Q Consensus 17 ~~~~~~~~----pvs~~I~L~V~yp----PeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a-~V 69 (70)
|.+.+... .....+.|.|..+ |.|....+......|..++|.|.+.+ +|.+ .|
T Consensus 96 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 158 (219)
T 1c1e_H 96 CARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTV 158 (219)
T ss_dssp EEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEE
T ss_pred EEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEE
Confidence 66665531 2335677888764 88887665555678999999999999 8987 44
No 91
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=97.20 E-value=0.00056 Score=41.72 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=31.5
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.++|.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 111 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v 145 (201)
T 3s97_C 111 PYPADIVVQFKDVYALMGQNVTLECFALGNPVPDI 145 (201)
T ss_dssp CEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEE
T ss_pred CCCCceEecCCceEEecCCcEEEEEEccCCCCCce
Confidence 48999999988888899999999999999998865
No 92
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.18 E-value=0.00036 Score=44.64 Aligned_cols=52 Identities=6% Similarity=0.040 Sum_probs=37.2
Q ss_pred hcCcCCCcc--ceeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKE--EVRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+++... +..+.|.| .+..+|.|.+..+......|..++|.|.+.+++.+
T Consensus 84 ~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~ 139 (207)
T 2vol_A 84 KCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPE 139 (207)
T ss_dssp EEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSS
T ss_pred EEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECC
Confidence 466666544 34566666 78999999887554434469999999999996443
No 93
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.16 E-value=0.00086 Score=43.77 Aligned_cols=53 Identities=6% Similarity=-0.009 Sum_probs=41.6
Q ss_pred cCcCCC----ccceeeeEEEEeec----------------CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 17 EEPEKD----KEEVRRRRRRNQKN----------------LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 17 ~~~~~~----~~pvs~~I~L~V~y----------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.+. .......+.|.|.- +|.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 98 C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 170 (256)
T 3umt_A 98 CARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNL 170 (256)
T ss_dssp EEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred EEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEE
Confidence 666554 33345677888883 889988888888899999999999999887654
No 94
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=97.16 E-value=0.00032 Score=42.70 Aligned_cols=37 Identities=30% Similarity=0.320 Sum_probs=33.0
Q ss_pred EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 33 NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 33 ~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+||.|....+-+...+|..++|.|.+.+.|.+.|
T Consensus 3 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 39 (197)
T 3lcy_A 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDI 39 (197)
T ss_dssp CCCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEE
T ss_pred ccCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEE
Confidence 3678999999988899999999999999999998754
No 95
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.14 E-value=0.00048 Score=43.81 Aligned_cols=50 Identities=12% Similarity=-0.023 Sum_probs=41.4
Q ss_pred hcCcCCCccceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.....++.+.|.|.. +|.|.... ......|..++|.|.+.+.|.
T Consensus 147 ~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~ 199 (262)
T 3rjd_A 147 HCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQ 199 (262)
T ss_dssp EEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC
T ss_pred EEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCC
Confidence 488888888888999999984 78887776 344577999999999999986
No 96
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=97.13 E-value=0.00028 Score=44.71 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=29.9
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..|||.|..+.. +.+..|..++|.|.+.+.|.+.|
T Consensus 16 ~~~~P~~~~p~~-~~~~~G~~v~l~C~~~g~p~p~i 50 (215)
T 3mtr_A 16 HMYAPKLQGPVA-VYTWEGNQVNITCEVFAYPSATI 50 (215)
T ss_dssp CCEEEEEECCSE-EEECTTCCEEEEEEEEEESCCEE
T ss_pred eecCCcccCCce-EEEECCCCEEEEEEEeecCCCEE
Confidence 568999965554 88899999999999999999865
No 97
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=97.13 E-value=0.00052 Score=41.47 Aligned_cols=36 Identities=11% Similarity=0.074 Sum_probs=30.1
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.-||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i 53 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEI 53 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeE
Confidence 346899998888888899999999999999998865
No 98
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=97.12 E-value=0.00041 Score=39.66 Aligned_cols=38 Identities=29% Similarity=0.254 Sum_probs=31.9
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..+.-||.|......+...+|..++|.|.+.+.|.+.|
T Consensus 8 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i 45 (107)
T 3irg_B 8 GDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVV 45 (107)
T ss_dssp --CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred CCCCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEE
Confidence 34566899988888888999999999999999998864
No 99
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.12 E-value=0.0003 Score=40.05 Aligned_cols=35 Identities=17% Similarity=0.053 Sum_probs=30.3
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v 40 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVI 40 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEE
Confidence 45888988877778889999999999999998864
No 100
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=97.12 E-value=0.00017 Score=45.76 Aligned_cols=52 Identities=13% Similarity=-0.043 Sum_probs=40.6
Q ss_pred cCcCCCc-cceeeeEEEEeecCCeEEEecceEEeccCCcEE-EEEEEe-eeCCCCC
Q psy15736 17 EEPEKDK-EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQ-LVCIVH-AEPHADP 69 (70)
Q Consensus 17 ~~~~~~~-~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~-L~CiV~-A~P~a~V 69 (70)
|...+.. ...++.+.|+|..+|.|.+..+-.. ..|..+. |.|.+. +.|.+.|
T Consensus 95 C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v 149 (221)
T 3eow_R 95 CLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQI 149 (221)
T ss_dssp EEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCE
T ss_pred EEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCee
Confidence 6666544 5678999999999999987644433 6788995 999988 8998865
No 101
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.11 E-value=0.00063 Score=46.80 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=39.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.|.+.+.+...++++.|.|.++|..-.-.+. ....|..+ |.|.+++. |.+
T Consensus 75 ~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~ 125 (210)
T 1gsm_A 75 VCVGSCGGRTFQHTVQLLVYAFPNQLTVSPA-ALVPGDPE-VACTAHKVTPVD 125 (210)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCSEEEEESS-SBCTTCCE-EEEEEEEEBCCC
T ss_pred EEEEEeCCCceEEEEEEEEEecCCCcEEccc-eEEeCCce-EEEEeCCCCCCC
Confidence 5888888888899999999999976554343 44568888 99999996 654
No 102
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.11 E-value=0.00061 Score=42.20 Aligned_cols=48 Identities=13% Similarity=0.116 Sum_probs=39.7
Q ss_pred hcCcCCC-ccceeeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+. +...+..+.|.|.++ |.|...... ...|..++|.|.+.+.|
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p 138 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG 138 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT
T ss_pred EEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC
Confidence 4666666 477888999999888 888887666 78899999999999977
No 103
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=97.11 E-value=0.00066 Score=51.06 Aligned_cols=54 Identities=7% Similarity=-0.051 Sum_probs=48.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|+|..||.+.+..+......|..++|.|.+.+.|.+.|
T Consensus 322 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v 375 (816)
T 3dmk_A 322 LCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTV 375 (816)
T ss_dssp EEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEE
T ss_pred EEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEE
Confidence 488888877788999999999999998888888899999999999999998865
No 104
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.11 E-value=0.00074 Score=43.43 Aligned_cols=53 Identities=8% Similarity=0.028 Sum_probs=38.5
Q ss_pred cCcCCC--ccceeeeEEEEeecC---------------CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 17 EEPEKD--KEEVRRRRRRNQKNL---------------PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 17 ~~~~~~--~~pvs~~I~L~V~yp---------------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.+. .........|.|..+ |.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 98 C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v 167 (247)
T 2ghw_B 98 CARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNL 167 (247)
T ss_dssp EEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCE
T ss_pred EeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceE
Confidence 666665 222344567888754 55776666778889999999999999997754
No 105
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=97.11 E-value=0.00019 Score=46.51 Aligned_cols=54 Identities=15% Similarity=0.084 Sum_probs=43.3
Q ss_pred hcCcCCCc-cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDK-EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~-~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.. ...++.+.|+|..+|.+....+.+....|..++|.|.+.+.|.+.|
T Consensus 76 ~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 130 (291)
T 2wim_A 76 RCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 130 (291)
T ss_dssp EEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEE
T ss_pred EEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEE
Confidence 36666653 3346889999999999887766677789999999999999998764
No 106
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.08 E-value=0.00019 Score=52.83 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=20.6
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec---ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER---SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~---~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|+|.++|.|.+.. +.+....|..++|.|.+.++|.+.|
T Consensus 306 ~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 362 (772)
T 3v2a_R 306 TCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEI 362 (772)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCC---------------------------------
T ss_pred EEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeE
Confidence 47777777778899999999999987653 4566788999999999999998875
No 107
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.08 E-value=0.00038 Score=40.77 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=29.7
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i 39 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITC 39 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEE
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEE
Confidence 4788888777888899999999999999998865
No 108
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.08 E-value=0.00042 Score=43.44 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=39.0
Q ss_pred cCcCCCcc--ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 17 EEPEKDKE--EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 17 ~~~~~~~~--pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.+.|.
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p 140 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYP 140 (211)
T ss_dssp EEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBS
T ss_pred EEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecC
Confidence 66666554 56777899999 8999998765444457999999999999754
No 109
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.07 E-value=0.00071 Score=43.34 Aligned_cols=51 Identities=12% Similarity=0.046 Sum_probs=35.9
Q ss_pred cCcCCCc---cceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDK---EEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~---~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|...+.+ ......+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 95 C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 153 (215)
T 1c5d_H 95 CTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEP 153 (215)
T ss_dssp EEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSC
T ss_pred EEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCC
Confidence 5555543 123345788887 57899876544445679999999999998 876
No 110
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.06 E-value=0.0008 Score=42.70 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=36.2
Q ss_pred cCcCCCcc---ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDKE---EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~~---pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|.+.+.+. .....+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 98 C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 156 (220)
T 1pz5_B 98 CTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEP 156 (220)
T ss_dssp EEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSC
T ss_pred EEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCC
Confidence 55555431 12245677776 68998876544445789999999999998 887
No 111
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.05 E-value=0.00011 Score=50.17 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=42.6
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEee-----eCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-----EPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-----~P~a~V 69 (70)
.|.+.+.+..+...+.|.|.++|.+. +.+.+.+|..++|.|.+.+ +|.+.|
T Consensus 158 ~C~a~~~~~~~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i 213 (363)
T 1wio_A 158 TCTVLQNQKKVEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGEL 213 (363)
T ss_dssp EEEEEETTEEEEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEE
T ss_pred EEEEecCCCeEEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeE
Confidence 48888889999999999999888865 5677788999999999988 666543
No 112
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.03 E-value=0.00084 Score=43.42 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=39.5
Q ss_pred hcCcCCCccceeeeEEEEeecCCeE-EEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEI-EVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI-~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.....+..+.|.|.++|.+ ....+.+....|..+.|.|.+.+.|.+
T Consensus 67 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~ 119 (289)
T 3ejj_X 67 RCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALK 119 (289)
T ss_dssp EEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGG
T ss_pred EEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcc
Confidence 4777777677899999999999984 555677788899999999999998765
No 113
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.02 E-value=0.001 Score=42.30 Aligned_cols=51 Identities=12% Similarity=0.046 Sum_probs=35.6
Q ss_pred cCcCCCcc-----ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDKE-----EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~~-----pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 98 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 158 (222)
T 1q9r_B 98 CARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 158 (222)
T ss_dssp EEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSC
T ss_pred EEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCC
Confidence 66665442 22345677776 57888876544445679999999999997 887
No 114
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=97.02 E-value=0.00026 Score=47.96 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=45.3
Q ss_pred hcCcCC--CccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEK--DKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~--~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+ .+...+..+.|.|..||.+....+.+....|..+.|.|.+.+.|.+.|
T Consensus 98 ~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v 153 (403)
T 3laf_A 98 QCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTI 153 (403)
T ss_dssp EEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEE
T ss_pred EEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeE
Confidence 477763 455567889999999999988888888899999999999999998754
No 115
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.02 E-value=0.00063 Score=46.87 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=38.5
Q ss_pred hcCcCCCcc-----ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDKE-----EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~~-----pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.|.++++.. .......|.|. ++|.|....+......|..++|.|.+.++ |.+
T Consensus 313 ~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 374 (438)
T 1qgc_4 313 YCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEP 374 (438)
T ss_dssp EEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSC
T ss_pred EEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEEEeccccCCC
Confidence 377776322 33456678887 68988877655556789999999999998 876
No 116
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=97.01 E-value=0.00023 Score=43.99 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=39.7
Q ss_pred hcCcCCCcc-ceeeeEEEEeec-CCeEEEecceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQKN-LPEIEVERSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~y-pPeI~v~~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
.|.+.+... ..+..+.|.|.+ +|.+....+.+....|..++|.|.+ .+.|.+.|
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v 144 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTI 144 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEE
T ss_pred EEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEE
Confidence 366665433 346788999988 4455555556677889999999999 99998864
No 117
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=97.01 E-value=0.00035 Score=45.15 Aligned_cols=52 Identities=12% Similarity=0.189 Sum_probs=36.1
Q ss_pred hcCcCCCccc--eeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 16 EEEPEKDKEE--VRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p--vs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
.|.+.+.+.. ..+.+.+ .+.++|.|.+..+-.....|..++|.|.+.+ +|.+
T Consensus 92 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 148 (218)
T 2rgs_A 92 KCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGD 148 (218)
T ss_dssp EEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSC
T ss_pred EEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCC
Confidence 3666655433 3555544 7889999987654433345999999999999 5654
No 118
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.01 E-value=0.00027 Score=41.01 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=30.0
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.-||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 40 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKI 40 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEE
Confidence 34788888877888899999999999999998865
No 119
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.00 E-value=0.00093 Score=45.54 Aligned_cols=54 Identities=15% Similarity=0.022 Sum_probs=40.4
Q ss_pred hcCcCCCccceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CC-CCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PH-ADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~-a~V 69 (70)
.|.+.+........+.|.|. .+|.|....+......|..++|.|.+.++ |. +.|
T Consensus 95 ~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 154 (344)
T 1za6_B 95 FCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 154 (344)
T ss_dssp EEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCE
T ss_pred EEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEE
Confidence 47777755455567788888 68888876655556789999999999998 54 443
No 120
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.00 E-value=0.00086 Score=48.19 Aligned_cols=51 Identities=8% Similarity=0.006 Sum_probs=44.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.....+..+.|.|..+|.+......+...+|..++|.|.+.+.|.
T Consensus 91 ~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 141 (585)
T 2ocw_A 91 KCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENA 141 (585)
T ss_pred EEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCC
Confidence 477777776778999999999999998888888899999999999997654
No 121
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.00 E-value=0.0016 Score=43.92 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=36.9
Q ss_pred hcCcCC------CccceeeeEEEEeecCC----eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEK------DKEEVRRRRRRNQKNLP----EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~------~~~pvs~~I~L~V~ypP----eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+ ....+++.+.|.|.++| -+- ..+.+...+|..++|.|.+.+.|
T Consensus 198 ~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p 256 (329)
T 3oq3_B 198 DCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVSTS 256 (329)
T ss_dssp EEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEETT
T ss_pred EEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEECC
Confidence 366664 34455667999999987 333 44457778999999999999998
No 122
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=96.99 E-value=0.00047 Score=43.71 Aligned_cols=53 Identities=11% Similarity=0.084 Sum_probs=39.0
Q ss_pred cCcCCCccc-----eeeeEEEEeecC---CeEEEec-ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 17 EEPEKDKEE-----VRRRRRRNQKNL---PEIEVER-SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 17 ~~~~~~~~p-----vs~~I~L~V~yp---PeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.+.... +++.+.|.|..+ |.+.+.. +.+...+|..++|.|.+.+.|.|.|
T Consensus 107 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 107 CQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp EEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred EEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 555554332 367899999985 6666643 3577778999999999999998854
No 123
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=96.95 E-value=0.0011 Score=42.20 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=34.2
Q ss_pred hcCcCCCccce-eeeEEEEeec--CCeEEEe-cceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEV-RRRRRRNQKN--LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pv-s~~I~L~V~y--pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.+... +..+.|+|.- +|.+.+. .+.+...+|..++|.|.+.+.|.+
T Consensus 80 ~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~ 135 (213)
T 2x1w_L 80 FCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNV 135 (213)
T ss_dssp EEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTB
T ss_pred EEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCC
Confidence 47777655543 3347888854 5666665 344577899999999999997754
No 124
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=96.94 E-value=0.00022 Score=44.62 Aligned_cols=53 Identities=17% Similarity=0.119 Sum_probs=40.5
Q ss_pred cCcCCCc-cceeeeEEEEeec-CCeEEEecceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 17 EEPEKDK-EEVRRRRRRNQKN-LPEIEVERSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 17 ~~~~~~~-~pvs~~I~L~V~y-pPeI~v~~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
|.+.+.. ...++.+.|.|.+ +|.+....+.+....|..++|.|.+ .+.|.+.|
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v 141 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTL 141 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEE
T ss_pred EEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeE
Confidence 5565433 3346678888887 6777777667778899999999999 99998864
No 125
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=96.94 E-value=0.0019 Score=42.73 Aligned_cols=54 Identities=9% Similarity=0.049 Sum_probs=41.7
Q ss_pred hcC-cCCCccceeeeEEEEeecCCeEEE--ecceEEeccC---CcEEEEEE-EeeeCCCCC
Q psy15736 16 EEE-PEKDKEEVRRRRRRNQKNLPEIEV--ERSWVHSGEG---YEAQLVCI-VHAEPHADP 69 (70)
Q Consensus 16 ~~~-~~~~~~pvs~~I~L~V~ypPeI~v--~~~~Vha~~G---~~a~L~Ci-V~A~P~a~V 69 (70)
.|. ..+.....+..+.|+|.++|.+.+ ..+.+....| ..+.|.|. +.+.|.+.|
T Consensus 108 ~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i 168 (331)
T 3u83_A 108 ICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVV 168 (331)
T ss_dssp EEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEE
T ss_pred EEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceE
Confidence 355 444455688999999999999965 4556667778 77999997 999998865
No 126
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=96.94 E-value=0.00098 Score=41.67 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=39.9
Q ss_pred hcCcCCC-ccceeeeEEEEe---ecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQ---KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V---~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+. +......+.|.| ..+|.|.+..+......|..++|.|.+.+.|.+
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~ 142 (213)
T 3r06_A 87 YCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPK 142 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSS
T ss_pred EEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCC
Confidence 3777665 334566778888 899999987666666678899999999998753
No 127
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=96.93 E-value=0.00041 Score=46.44 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=36.4
Q ss_pred hcCcCCCcc---ceeee--EEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKE---EVRRR--RRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~---pvs~~--I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+... +.... +.+.|.+||.|.+.... ..+|..++|.|.+.+.|.+
T Consensus 196 ~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~ 250 (327)
T 2wng_A 196 ICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYPQ 250 (327)
T ss_dssp EEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBSS
T ss_pred EEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccCC
Confidence 477766432 23334 44478999999988665 5789999999999996544
No 128
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=96.93 E-value=0.00043 Score=43.48 Aligned_cols=51 Identities=12% Similarity=-0.060 Sum_probs=29.1
Q ss_pred hcCcCCCcc--ceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKDKE--EVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.|.+.+... ..+..+.|.|.+ +|.|....+ ....+|..++|.|.+.+.| +.
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~p-~~ 129 (196)
T 2d3v_A 74 RCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPS-PVVTSGENVTLQCGSRLRF-DR 129 (196)
T ss_dssp EEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SE
T ss_pred EEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCC-ccccCCCcEEEEEEcCCCC-CE
Confidence 366654422 235678888888 688887643 3567899999999999998 54
No 129
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=96.92 E-value=0.0003 Score=46.06 Aligned_cols=50 Identities=8% Similarity=0.007 Sum_probs=41.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCC-CCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH-ADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~-a~V 69 (70)
.|.+.+ |. +..+.|.|.++|.+....+.+....|..+.|.|.+.+ |. +.|
T Consensus 73 ~C~~~n-g~--~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v 123 (290)
T 2o26_X 73 TCSNSN-GL--TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQY 123 (290)
T ss_dssp EEEESS-SC--EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEE
T ss_pred EEEeeC-Cc--cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceE
Confidence 477777 43 7889999999999888777888889999999999995 76 543
No 130
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=96.91 E-value=0.0011 Score=42.82 Aligned_cols=40 Identities=15% Similarity=0.211 Sum_probs=29.2
Q ss_pred eeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
+.+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 117 ~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p 161 (228)
T 3bae_H 117 QGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP 161 (228)
T ss_dssp CCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSC
T ss_pred CcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCC
Confidence 45788887 68999876654445789999999999997 776
No 131
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=96.91 E-value=0.0002 Score=47.61 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=42.1
Q ss_pred hcCcCCCccceeeeEEEEeec----CCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN----LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y----pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.+ +|.+... ...+....|..++|.|.+.+.|.+.|
T Consensus 196 ~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v 254 (334)
T 1ry7_B 196 TCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHI 254 (334)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEE
T ss_pred EEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeE
Confidence 577777777788999999987 4556542 24456678999999999999998754
No 132
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=96.88 E-value=0.00067 Score=42.21 Aligned_cols=54 Identities=11% Similarity=0.148 Sum_probs=41.3
Q ss_pred hcCcCCCccceeeeEEEEeec----CCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN----LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y----pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.. +|.+... ...+....|..++|.|.+.+.|.+.|
T Consensus 92 ~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v 150 (231)
T 3ojm_B 92 TCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHI 150 (231)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEE
T ss_pred EEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEE
Confidence 477877777788889999986 4444432 34566688999999999999998854
No 133
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=96.87 E-value=0.00025 Score=47.57 Aligned_cols=54 Identities=13% Similarity=0.074 Sum_probs=30.5
Q ss_pred hcCcCCC--ccc--eeeeEEEEeec------CCeEEEecc--eEEeccCCcEEEEEEEee----eCCCCC
Q psy15736 16 EEEPEKD--KEE--VRRRRRRNQKN------LPEIEVERS--WVHSGEGYEAQLVCIVHA----EPHADP 69 (70)
Q Consensus 16 ~~~~~~~--~~p--vs~~I~L~V~y------pPeI~v~~~--~Vha~~G~~a~L~CiV~A----~P~a~V 69 (70)
.|.+.+. +.. +++.+.|+|.. +|.|..+.. .+....|..++|.|.+.+ .|.+.|
T Consensus 193 ~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v 262 (349)
T 4dep_C 193 TCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEV 262 (349)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEE
T ss_pred EEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEE
Confidence 4677664 343 68999999988 799877753 337788999999999995 566654
No 134
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=96.87 E-value=0.0005 Score=43.03 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=38.2
Q ss_pred cCcCCCcc-----ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 17 EEPEKDKE-----EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 17 ~~~~~~~~-----pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.+ .|.+
T Consensus 92 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~ 152 (218)
T 3s96_B 92 CGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSG 152 (218)
T ss_dssp EEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSC
T ss_pred EEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCC
Confidence 66665543 45667889998 8999998655555566899999999999 4655
No 135
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=96.84 E-value=0.0011 Score=37.34 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=27.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|.+..+.+....|..+.|.|.+.+.|.+.+
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i 35 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHY 35 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEE
Confidence 466666666677889999999999999998854
No 136
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=96.83 E-value=0.0013 Score=42.46 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=31.1
Q ss_pred eeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 27 RRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 27 s~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
...+.|+|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 112 ~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 157 (223)
T 1dee_B 112 GQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDS 157 (223)
T ss_dssp CCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSC
T ss_pred cCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCC
Confidence 356788887 58898865433334689999999999998 765
No 137
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=96.82 E-value=0.0009 Score=46.89 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=36.5
Q ss_pred hcCcCCCccce--eeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDKEEV--RRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~~pv--s~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.|.+.+..... .+.|.+ .+.++|.|.+..+......|..++|.|.+.++ |.+
T Consensus 321 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~ 377 (444)
T 1igt_B 321 KCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPED 377 (444)
T ss_dssp EEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSC
T ss_pred EEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCC
Confidence 47777765544 667766 88999999876554333345569999999995 544
No 138
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=96.82 E-value=0.0015 Score=42.49 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=39.1
Q ss_pred hcCcCCCccceeeeEEEEeec--CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN--LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y--pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|+|.. +|.|...... ..+|..++|.|.+. |.+.|
T Consensus 77 ~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~--v~~G~~v~l~C~~~--p~~~i 128 (265)
T 2oz4_A 77 TCAVILGNQSQETLQTVTIYSFPAPNVILTKPE--VSEGTEVTVKCEAH--PRAKV 128 (265)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCEEEESCSE--EETTCEEEEEEECC--TTSEE
T ss_pred EEEEecCCCCcEEEEEEEEeCCCCceeecCCce--ecCCCcEEEEEEcc--CCCEE
Confidence 478888877788999999987 5677765554 45699999999998 77654
No 139
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=96.81 E-value=0.00095 Score=42.13 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.0
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+..||.|....+-+...+|..+.|.|.+.+.|.+.|
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v 38 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKI 38 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEE
Confidence 467899998877788899999999999999998864
No 140
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=96.80 E-value=0.0013 Score=48.17 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=40.0
Q ss_pred hcCcCCCcc-ceeeeEEEEeecCCeE-EEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQKNLPEI-EVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~ypPeI-~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+... ..+..+.|+|.++|.+ .+..+-.....|..++|.|.+.+.|.+.|
T Consensus 358 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i 413 (642)
T 1e07_A 358 ECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQY 413 (642)
T ss_pred EEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeE
Confidence 466666544 3467799999999864 33333455678999999999999999865
No 141
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=96.80 E-value=0.00092 Score=43.66 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=41.8
Q ss_pred hcCcCCCccceeeeEEEEeec--------------------CCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN--------------------LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y--------------------pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|.. +|.+... .+.+....|..++|.|.+.+.|.+.|
T Consensus 180 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i 254 (317)
T 2y25_A 180 VMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEV 254 (317)
T ss_dssp EEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEE
T ss_pred EEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEE
Confidence 477888777888888888752 4555544 55677789999999999999998864
No 142
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=96.78 E-value=0.003 Score=41.13 Aligned_cols=46 Identities=7% Similarity=-0.046 Sum_probs=36.3
Q ss_pred ccceeeeEEEEeec---------------CCeEEEecceEEeccCCcEEEEEEEeeeCC-CC
Q psy15736 23 KEEVRRRRRRNQKN---------------LPEIEVERSWVHSGEGYEAQLVCIVHAEPH-AD 68 (70)
Q Consensus 23 ~~pvs~~I~L~V~y---------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~-a~ 68 (70)
.........|.|.. +|.|....+.+.+.+|..++|.|.+.+.|. +.
T Consensus 120 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~ 181 (256)
T 3juy_B 120 MDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSIRSRR 181 (256)
T ss_dssp CCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESSCCTTCC
T ss_pred eeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECCCcCCee
Confidence 34455677889988 566777777888899999999999999875 44
No 143
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=96.77 E-value=0.00057 Score=47.97 Aligned_cols=43 Identities=9% Similarity=-0.088 Sum_probs=21.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+++....++..+.|+|..+| ..|..++|.|.+.|+|.|.|
T Consensus 317 ~C~a~N~~g~~~~~~~l~V~~~~-----------~~g~~~~l~C~~~g~P~P~i 359 (361)
T 2xot_A 317 TCYAMGETFNETLSVELKVYNFT-----------LHGHHDTLNAAADPWSHPQF 359 (361)
T ss_dssp EEEEECSSCEEEEEEEEEEESSC-----------CC------------------
T ss_pred EEEEecCCCccEEEEEEEEEeee-----------ccCCceEEEEEeCCCCCCcc
Confidence 58899999999999999997755 56889999999999999986
No 144
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=96.77 E-value=0.0011 Score=41.53 Aligned_cols=49 Identities=14% Similarity=0.053 Sum_probs=36.3
Q ss_pred hcCcCCCc---cceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDK---EEVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~---~pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+.. ...+..+.|.|.+ +|.|..... ....+|..++|.|.+.+.|
T Consensus 74 ~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~~~~ 128 (198)
T 1ugn_A 74 RCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPS-PVVNSGGNVTLQCDSQVAF 128 (198)
T ss_dssp EEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESC-SEEETTCCEEEEEECSSCC
T ss_pred EEEEECCCCCcccCCccEEEEEcccccCCccccCCc-cccCCCCcEEEEEecCCCC
Confidence 46665543 2446788999988 688887753 3456899999999999873
No 145
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=96.76 E-value=0.00022 Score=52.56 Aligned_cols=53 Identities=15% Similarity=0.141 Sum_probs=0.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.....++.+.|+|..+|.|.+... ....+|..++|.|.+.+.|.+.|
T Consensus 529 ~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v 581 (772)
T 3v2a_R 529 KCEAVNKVGRGERVISFHVTRGPEITLQPD-MQPTEQESVSLWCTADRSTFENL 581 (772)
T ss_dssp ------------------------------------------------------
T ss_pred EEEEEccccccceeEEEEEECCceeeccCC-cccccCCceEEEEeccCCCCCCc
Confidence 588888888889999999999999988754 34678999999999999998765
No 146
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=96.75 E-value=0.0009 Score=43.36 Aligned_cols=50 Identities=18% Similarity=0.043 Sum_probs=38.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeE-EEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEI-EVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI-~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.....+..+.|.|..+|.+ ....+.+....|..+.|.|.+.+ |.
T Consensus 67 ~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~ 117 (292)
T 4dkd_C 67 RCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PV 117 (292)
T ss_dssp EECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GG
T ss_pred EEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CC
Confidence 5888887777799999999999985 44455677789999999999998 54
No 147
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=96.74 E-value=0.00031 Score=46.93 Aligned_cols=53 Identities=17% Similarity=0.171 Sum_probs=42.4
Q ss_pred hcCcCCCcc----ceeeeEEEEee-----cCCeEEEecceEEeccCCcEEEEEEE---eeeC-CCC
Q psy15736 16 EEEPEKDKE----EVRRRRRRNQK-----NLPEIEVERSWVHSGEGYEAQLVCIV---HAEP-HAD 68 (70)
Q Consensus 16 ~~~~~~~~~----pvs~~I~L~V~-----ypPeI~v~~~~Vha~~G~~a~L~CiV---~A~P-~a~ 68 (70)
.|.+.+... .+++.+.|+|. ++|.|..+.+.+....|..++|.|.+ .+.| .+.
T Consensus 196 ~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~ 261 (339)
T 3o4o_C 196 RCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTM 261 (339)
T ss_dssp EEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCE
T ss_pred EEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCce
Confidence 366665443 67889999997 47788888777888999999999999 8999 543
No 148
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=96.73 E-value=0.0022 Score=41.31 Aligned_cols=48 Identities=6% Similarity=-0.136 Sum_probs=37.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.++ ..+..+.|.|.++|.+....+ ....+|..++|.|.+.+.|.
T Consensus 70 ~C~a~n~--~~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p 117 (204)
T 3sgj_C 70 RCQTQLS--TLSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTA 117 (204)
T ss_dssp EEEETTS--BCCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCC
T ss_pred EEEeCCC--cccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCC
Confidence 3666653 456789999999998877765 44567999999999977643
No 149
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=96.72 E-value=0.0015 Score=43.68 Aligned_cols=52 Identities=8% Similarity=-0.019 Sum_probs=36.2
Q ss_pred hcCcCCCccc-----eeeeEEEEeecCCeE-EEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEE-----VRRRRRRNQKNLPEI-EVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p-----vs~~I~L~V~ypPeI-~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.+.+ .++.+.|.|..+|.. .+..+.+....|..++|.|.+.+.|.+
T Consensus 90 ~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~ 147 (327)
T 2wng_A 90 YCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPR 147 (327)
T ss_dssp EEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSS
T ss_pred EEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCC
Confidence 4777766543 235678899877643 222333556789999999999999876
No 150
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=96.72 E-value=0.0013 Score=41.84 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=35.1
Q ss_pred hcCcCCCccc--eeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEE--VRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~p--vs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.... .++.|.+ .+..+|.|.+..+......|..++|.|.+.+++.
T Consensus 84 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P 138 (207)
T 1l6x_A 84 KCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYP 138 (207)
T ss_dssp EEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred EEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeEC
Confidence 4777766543 3555555 6789999988654433345677999999999643
No 151
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=96.69 E-value=0.0005 Score=41.92 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=32.0
Q ss_pred EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 33 NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 33 ~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+..||.|..+...+...+|..++|.|.+.+.|.+.|
T Consensus 3 ~~~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i 39 (192)
T 2iep_A 3 KLPKAPVITTPLETVDALVEEVATFMCAVESYPQPEI 39 (192)
T ss_dssp -CCEEEEESSCCCEEEEETTSCEEEECCEEEESCCEE
T ss_pred ccCCCceeecCccceeeeCCCcEEEEeeCCCCCCCeE
Confidence 3577899999888888999999999999999998754
No 152
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=96.69 E-value=0.0013 Score=41.09 Aligned_cols=52 Identities=12% Similarity=0.087 Sum_probs=36.8
Q ss_pred hcCcCCCccc-eeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
.|.+.+.... ....+.|.|.. +|.|.+..+......|..++|.|.+.+ .|.+
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~ 143 (213)
T 3d9a_L 87 FCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKD 143 (213)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSC
T ss_pred EEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCc
Confidence 3777665433 33455777775 999998765555567999999999998 5554
No 153
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=96.67 E-value=0.00083 Score=41.41 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=31.8
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..+||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 6 ~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v 41 (212)
T 2v9r_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI 41 (212)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEE
T ss_pred ccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEE
Confidence 357999999888888999999999999999998754
No 154
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=96.66 E-value=0.0021 Score=45.79 Aligned_cols=52 Identities=10% Similarity=0.045 Sum_probs=35.6
Q ss_pred hcCcCCCccceeeeEEEE----eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRN----QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~----V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.+........|. +.++|.|.+..+......|.+++|.|.+.+.|.+
T Consensus 400 ~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~ 455 (523)
T 2rcj_C 400 KCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPS 455 (523)
T ss_pred EEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCCceEEEEEEEeeECC
Confidence 488876655544333333 7899999886544333445669999999998776
No 155
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=96.65 E-value=0.0026 Score=39.47 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=35.1
Q ss_pred hcCcCCCcc-ce----eeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 16 EEEPEKDKE-EV----RRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~-pv----s~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
.|.+.+... .. .+.+.|.|..+ |.|.+.. ...|..++|.|.+. ++|.|.|
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~----~~~g~~~~l~C~~~~g~P~p~i 139 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE----IPTSNIRRIICSTSGGFPEPHL 139 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEE----CSSTTEEEEEEEEEEESSCEEE
T ss_pred EEEEEcCCCCccccccccEEEEEEcCCCCCCceEecc----CCCCCeEEEEEecCCccCCCEE
Confidence 366665432 22 46888999887 6766532 25589999999995 9998865
No 156
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=96.65 E-value=0.0013 Score=38.75 Aligned_cols=34 Identities=24% Similarity=0.174 Sum_probs=26.1
Q ss_pred ecCCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.||.|.-+.. .|++.+|+.+.|.|.|.+ |.+.|
T Consensus 2 ~~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v 37 (91)
T 2lvc_A 2 HMPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPV 37 (91)
T ss_dssp CCCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCC
T ss_pred CCCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEE
Confidence 35777766643 577889999999999965 87765
No 157
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=96.64 E-value=0.0024 Score=47.63 Aligned_cols=52 Identities=8% Similarity=-0.036 Sum_probs=40.5
Q ss_pred hcCcCCCccce-eeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 16 EEEPEKDKEEV-RRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pv-s~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
.|.+.|..... ++.+.|+|.++|.+ +.+-+....|..+.|.|.+. +.|.+.|
T Consensus 207 ~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i 260 (527)
T 3qs9_E 207 RCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGL 260 (527)
T ss_dssp EEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCE
T ss_pred EEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEE
Confidence 48888665444 44599999999988 44456668899999999996 8998865
No 158
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=96.63 E-value=0.0017 Score=40.94 Aligned_cols=50 Identities=10% Similarity=-0.032 Sum_probs=34.5
Q ss_pred hcCcCCCcc--ceeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKE--EVRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+... .....+.|.|. .+|.|.+..+...+..|..++|.|.+.+.+
T Consensus 88 ~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~ 142 (216)
T 2xzc_L 88 YCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFY 142 (216)
T ss_dssp EEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEB
T ss_pred EEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEc
Confidence 366666543 33455677776 789998854433334689999999999954
No 159
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=96.62 E-value=0.0021 Score=41.34 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=30.1
Q ss_pred eeEEEEeec----CCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQKN----LPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~y----pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
+.+.|.|.. +|.|.+..+......|..++|.|.+.++ |.+
T Consensus 115 ~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p 159 (225)
T 1op3_H 115 PGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 159 (225)
T ss_dssp CCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSC
T ss_pred CCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCC
Confidence 567888875 6888775443334679999999999998 765
No 160
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=96.62 E-value=0.00053 Score=45.57 Aligned_cols=53 Identities=8% Similarity=0.090 Sum_probs=21.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEE----------------------E----ecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIE----------------------V----ERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~----------------------v----~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+. ...+..+.|+|.++|.+. . ....+....|..++|.|.+.+.|.+.|
T Consensus 77 ~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v 155 (334)
T 1ry7_B 77 SCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSI 155 (334)
T ss_dssp -------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEE
T ss_pred EEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeE
Confidence 4777777 567888999998876432 1 223456678999999999999998764
No 161
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=96.61 E-value=0.0022 Score=41.70 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=37.5
Q ss_pred cCcCCC----ccceeeeEEEEeecC--------------CeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKD----KEEVRRRRRRNQKNL--------------PEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~----~~pvs~~I~L~V~yp--------------PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+. .......+.|.|.-+ |.|......+.+.+|..++|.|.+.+.|.+
T Consensus 103 C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 171 (257)
T 3gkz_A 103 CSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSS 171 (257)
T ss_dssp EEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCG
T ss_pred EEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccc
Confidence 666654 223445677888765 777777777888999999999999998875
No 162
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=96.60 E-value=0.003 Score=40.02 Aligned_cols=51 Identities=10% Similarity=-0.038 Sum_probs=33.8
Q ss_pred cCcCCCcc----ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKE----EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~----pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|...+... .....+.|.|. .+|.|.+..+-.....|..++|.|.+.++|.+
T Consensus 92 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~ 150 (215)
T 3nl4_H 92 CVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPE 150 (215)
T ss_dssp EEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSS
T ss_pred EEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCC
Confidence 55554432 24566778887 88999855444444579999999999998654
No 163
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=96.58 E-value=0.0012 Score=37.82 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=28.0
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.||.|..+.+.+.+.+|..++|.|.+.+.|.+
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~ 38 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP 38 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC
Confidence 47888777777888999999999999999987
No 164
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.58 E-value=0.0005 Score=40.45 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=29.7
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|....+.+....|..++|.|.+.+.|.+.|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i 40 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTI 40 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEE
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEE
Confidence 5788888877788899999999999999998864
No 165
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=96.56 E-value=0.0019 Score=40.68 Aligned_cols=49 Identities=10% Similarity=0.036 Sum_probs=33.9
Q ss_pred hcCcCCCccce--eeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEV--RRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pv--s~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+..... ++.+.|+|.++|. ++.+. ..+..++|.|.+.+.|.+.|
T Consensus 77 ~C~~~n~~g~~~~~~~~~l~V~~~~~----~p~i~-~~~~~v~L~C~~~g~p~p~i 127 (176)
T 1hng_A 77 NVTVYSTNGTRILNKALDLRILEMVS----KPMIY-WECSNATLTCEVLEGTDVEL 127 (176)
T ss_dssp EEEEEETTCCEEEEEEEEEEEECCCC----CCEEE-EETTTTEEEEECSSCSSCEE
T ss_pred EEEEEeCCCCEEEEEEEEEEEeCCCC----CCEEE-ecCCcEEEEEEecCCCCcEE
Confidence 47777655554 7889999988631 22232 22556999999999998765
No 166
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.55 E-value=0.0022 Score=36.64 Aligned_cols=33 Identities=12% Similarity=0.045 Sum_probs=28.1
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-||.|..+.+.+....|..++|.|.+.+ |.+.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v 39 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPV 39 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCC
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcE
Confidence 4788888877788899999999999997 77665
No 167
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=96.54 E-value=0.0028 Score=39.77 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=30.6
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v 38 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSI 38 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeE
Confidence 5899999988888899999999999999998754
No 168
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=96.53 E-value=0.0028 Score=39.67 Aligned_cols=51 Identities=10% Similarity=-0.001 Sum_probs=35.9
Q ss_pred cCcCCCcc-ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.+.|.+
T Consensus 90 C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 145 (212)
T 1q0x_L 90 CALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPG 145 (212)
T ss_dssp EEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSS
T ss_pred EEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCC
Confidence 66665432 23455677773 79999986554445679999999999997654
No 169
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=96.52 E-value=0.0017 Score=42.57 Aligned_cols=43 Identities=9% Similarity=-0.007 Sum_probs=32.8
Q ss_pred eeeEEEEeecCC---------------eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 27 RRRRRRNQKNLP---------------EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 27 s~~I~L~V~ypP---------------eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.+.|.|..+| .|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 114 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 171 (257)
T 1f3r_B 114 GPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYL 171 (257)
T ss_dssp CCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTCE
T ss_pred CCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCcE
Confidence 356789998864 3444455677889999999999999987654
No 170
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=96.51 E-value=0.00096 Score=42.97 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=26.7
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|||.|.++. ...|+.+.|.|.|.|.|+|.|
T Consensus 2 ~~pP~I~l~~----~~~~~~~~l~c~v~G~P~P~I 32 (126)
T 1he7_A 2 HMPASVQLHT----AVEMHHWCIPFSVDGQPAPSL 32 (126)
T ss_dssp CCCCCCCCCC----CCCCCEEEEEEEECCSSCCEE
T ss_pred CCCCEEEccC----CccCccEEEEEEEeeeCCCeE
Confidence 5999997776 347899999999999999976
No 171
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=96.48 E-value=0.004 Score=40.48 Aligned_cols=51 Identities=6% Similarity=-0.074 Sum_probs=38.7
Q ss_pred cCcCCCccce-eeeEEEEeec---------------CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKEEV-RRRRRRNQKN---------------LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~pv-s~~I~L~V~y---------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+..... .....|.|.- +|.|....+.+.+.+|..++|.|.+.+.|.+
T Consensus 97 C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 163 (253)
T 3uzq_A 97 CSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDR 163 (253)
T ss_dssp EEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEE
T ss_pred EEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCcccc
Confidence 6666543333 4667788874 6888888878888999999999999998865
No 172
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=96.48 E-value=0.003 Score=42.50 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=33.1
Q ss_pred hcCcCCCc--cceeeeEEEE--eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDK--EEVRRRRRRN--QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~--~pvs~~I~L~--V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.. .+....|.+. +.++|.|.+..+......|..++|.|.+.++|.+
T Consensus 194 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~ 249 (323)
T 2wqr_A 194 QCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPE 249 (323)
T ss_dssp EEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSS
T ss_pred EEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCC
Confidence 37776653 2233333333 5589999886544333349999999999995543
No 173
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=96.48 E-value=0.003 Score=40.20 Aligned_cols=42 Identities=12% Similarity=0.035 Sum_probs=33.1
Q ss_pred eeEEEEeecCC------------eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 28 RRRRRNQKNLP------------EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 28 ~~I~L~V~ypP------------eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
....|.|..+| .|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 106 ~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i 159 (238)
T 2p1y_A 106 HGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYF 159 (238)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEE
T ss_pred CCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcE
Confidence 45678887765 6666666778889999999999999987654
No 174
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=96.47 E-value=0.0034 Score=38.46 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=29.7
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|..+.+-+...+|..++|.|.+.+.|.+.|
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 36 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIV 36 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEE
Confidence 4788888877888899999999999999998754
No 175
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=96.46 E-value=0.0054 Score=37.73 Aligned_cols=49 Identities=6% Similarity=-0.176 Sum_probs=36.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+... +..+.|.|.++|.+..... ....+|..++|.|.+.+.|.+
T Consensus 70 ~C~~~n~~~--s~~~~l~V~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~~~ 118 (175)
T 1fnl_A 70 RCQTNLSTL--SDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTAL 118 (175)
T ss_dssp EEECSSSCC--CCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEECTTCCC
T ss_pred EEEeeCCcc--cccEEEEEeCCCceeeCCC-ceecCCCCEEEEEEcCCCCCc
Confidence 477766433 6778899988877655543 445789999999999988764
No 176
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.43 E-value=0.0012 Score=37.57 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=26.9
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|.+..+.+....|..++|.|.+.+.|.+.|
T Consensus 10 ~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v 42 (96)
T 2ens_A 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQI 42 (96)
T ss_dssp SCCCEEESTTSEECTTCEEEEECCCSSCSSCCC
T ss_pred CCEEEECCCCCEEcCCCeEEEEEEEccCCCCEE
Confidence 466666655566789999999999999998865
No 177
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=96.41 E-value=0.0036 Score=40.35 Aligned_cols=47 Identities=9% Similarity=-0.109 Sum_probs=27.1
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.++|. ....+.|.+..+|.|....+.+.+.+|..++|.|.+.+.|
T Consensus 20 ~C~a~g~---~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~ 66 (254)
T 2c1o_A 20 SCKASGY---SFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSL 66 (254)
T ss_dssp ---------------------CCCEEEECSEEEECTTSCEEEEEEESSCC
T ss_pred EEcCchh---hhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcc
Confidence 4777732 3345667777799999888889999999999999999988
No 178
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=96.41 E-value=0.0054 Score=40.33 Aligned_cols=51 Identities=10% Similarity=0.015 Sum_probs=32.9
Q ss_pred cCcCCCc----cceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 17 EEPEKDK----EEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 17 ~~~~~~~----~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
|...+.+ ....+.+.|.|. .+|.|.+..+......|..++|.|.+.+ +|.+
T Consensus 96 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 155 (253)
T 3liz_H 96 CTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 155 (253)
T ss_dssp EEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSC
T ss_pred EEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCC
Confidence 5555542 223455678886 8999987666555567999999999999 6655
No 179
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=96.40 E-value=0.0053 Score=38.30 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=35.8
Q ss_pred hcCcCCCcc--ceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKE--EVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+... ..+..+.|.|.+ +|.|....+. ....|..++|.|.+.+.|
T Consensus 74 ~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~~ 127 (196)
T 3p2t_A 74 RCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSPM 127 (196)
T ss_dssp EEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEEE
T ss_pred EEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCCC
Confidence 366666543 457778888864 6788877654 447899999999998855
No 180
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.40 E-value=0.0017 Score=37.31 Aligned_cols=33 Identities=15% Similarity=-0.074 Sum_probs=28.3
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|..+.+-+.+.+|+.++|.|.+.+.| +.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v 39 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQV 39 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCC
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEE
Confidence 578888877778889999999999999998 654
No 181
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=96.40 E-value=0.0026 Score=43.27 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=25.5
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
+.++|.|.+..+...+..|..++|.|.+.++|.+
T Consensus 239 ~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~ 272 (344)
T 1za6_B 239 QPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPS 272 (344)
T ss_dssp CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSS
T ss_pred CCcCCEEEEeCCChHhccCCcEEEEEEEeeEECC
Confidence 4689999887654444557789999999996443
No 182
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=96.39 E-value=0.0024 Score=38.67 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=28.0
Q ss_pred CCeEEEecc--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERS--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|.+..+ -+...+|..++|.|.+.+.|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 36 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAI 36 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeE
Confidence 789988755 477889999999999999998754
No 183
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=96.38 E-value=0.0048 Score=41.70 Aligned_cols=52 Identities=15% Similarity=0.017 Sum_probs=38.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEE-ecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEV-ERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v-~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
-|-....+....+.+.|.|.++|..-. ..+--...+|++.+|.|.|++ .|.+
T Consensus 64 ~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~ 117 (185)
T 1iam_A 64 MCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRA 117 (185)
T ss_dssp EEEEECSSCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGG
T ss_pred EEEEECCCCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCC
Confidence 366667778899999999999886522 222112578999999999999 5554
No 184
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=96.38 E-value=0.003 Score=38.49 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=30.1
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.-||.|..+.+.+...+|..++|.|.+.+.|.+.|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 37 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEV 37 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEEEecCCCEE
Confidence 34788888877888899999999999999998754
No 185
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=96.36 E-value=0.0039 Score=39.07 Aligned_cols=51 Identities=10% Similarity=0.012 Sum_probs=35.5
Q ss_pred hcCcCCCccc-eeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.... ....+.|.|.. +|.|.+..+......|..++|.|.+.+.+.
T Consensus 86 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p 140 (210)
T 1lk3_L 86 FCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYP 140 (210)
T ss_dssp EEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred EEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeC
Confidence 3777665432 23455777775 899998655444557999999999998543
No 186
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=96.35 E-value=0.0032 Score=41.94 Aligned_cols=52 Identities=6% Similarity=0.041 Sum_probs=35.9
Q ss_pred hcCcCCCccc--eeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEE--VRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p--vs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.+.+.... ..+.|.+ .+..+|.|.+..+......|..++|.|.+.+++.+
T Consensus 98 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~ 153 (239)
T 1i1c_A 98 KCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPP 153 (239)
T ss_dssp EEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSS
T ss_pred EEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECC
Confidence 3666665443 4556655 78899999887554333458899999999995443
No 187
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=96.35 E-value=0.0019 Score=45.23 Aligned_cols=51 Identities=6% Similarity=0.038 Sum_probs=37.3
Q ss_pred hcCcCCCccc--eeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEE--VRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~p--vs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+.... ..+.|.+ .+.++|.|.+..+......|..++|.|.+.++|.
T Consensus 311 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P 365 (434)
T 1igy_B 311 KCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFP 365 (434)
T ss_dssp BCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBC
T ss_pred EEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeEC
Confidence 4787776553 4566655 7889999988765444456888999999999643
No 188
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=96.34 E-value=0.0011 Score=37.45 Aligned_cols=26 Identities=8% Similarity=0.133 Sum_probs=22.5
Q ss_pred cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.+...+|..++|.|.+.+.|.+.|
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~v 40 (100)
T 3caf_A 15 KRLHAVPAANTVKFRCPAGGNPMPTM 40 (100)
T ss_dssp CCEEEECTTCCEEEECCEEEESCCEE
T ss_pred ccEEEecCCCEEEEEEEccccCCCEE
Confidence 35677889999999999999998864
No 189
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=96.33 E-value=0.0073 Score=38.42 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=34.7
Q ss_pred hcCcCCCcc-ceeeeEEEEeecCC-----eE-EEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQKNLP-----EI-EVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~ypP-----eI-~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+... .......|.|..+| .+ ....+.+.+..|..++|.|.+.+.|.
T Consensus 91 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~ 148 (240)
T 1moe_A 91 YCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNI 148 (240)
T ss_dssp EEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCG
T ss_pred EEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccC
Confidence 466666533 24566788888753 22 22334456788999999999999884
No 190
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=96.31 E-value=0.0035 Score=40.75 Aligned_cols=53 Identities=9% Similarity=0.060 Sum_probs=39.7
Q ss_pred hcCcCCCccceeeeEEEEeec------------CCeEEEecc-eEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKN------------LPEIEVERS-WVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~y------------pPeI~v~~~-~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
.|.+.+... ......|.|.+ +|.+....+ .+....|..++|.|.+. +.|.+.|
T Consensus 74 ~C~~~n~~g-~~~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v 140 (312)
T 2y23_A 74 SCDVTDTDG-IASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKV 140 (312)
T ss_dssp EEEESSSCC-CCEEEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEE
T ss_pred EEEEEeCCC-cEEEEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEE
Confidence 466766544 23367788875 888777654 77788999999999999 8898764
No 191
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=96.29 E-value=0.0053 Score=42.95 Aligned_cols=52 Identities=12% Similarity=0.021 Sum_probs=37.8
Q ss_pred hcCcCCCccceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.|.+.+........+.|.|. .+|.|....+......|..++|.|.+.+. |.+
T Consensus 94 ~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p 150 (434)
T 1igy_B 94 YCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEP 150 (434)
T ss_dssp CCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSC
T ss_pred EEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCC
Confidence 47777754445566788886 47888865544445789999999999997 765
No 192
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=96.28 E-value=0.0028 Score=39.55 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=31.0
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v 41 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTI 41 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeE
Confidence 56889999888888999999999999999998754
No 193
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=96.28 E-value=0.0055 Score=39.66 Aligned_cols=51 Identities=12% Similarity=0.037 Sum_probs=30.7
Q ss_pred cCcCCCcc-ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.++ |.+
T Consensus 96 C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p 152 (227)
T 1mju_H 96 CANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEP 152 (227)
T ss_dssp EEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSC
T ss_pred EEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCC
Confidence 55544321 22355688887 47888876554445679999999999997 765
No 194
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=96.28 E-value=0.0026 Score=45.30 Aligned_cols=52 Identities=17% Similarity=0.182 Sum_probs=39.9
Q ss_pred hcCcCCCccceeeeEEE----EeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDKEEVRRRRRR----NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L----~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.|.+.+.+..+...+.+ .+.++|.|....+......|..++|.|.+.+. |.+
T Consensus 194 ~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p 250 (523)
T 2rcj_C 194 SCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQP 250 (523)
T ss_pred EEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCC
Confidence 47777777766666665 45789999866555566789999999999987 766
No 195
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=96.27 E-value=0.0034 Score=35.41 Aligned_cols=35 Identities=23% Similarity=0.086 Sum_probs=25.3
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.-+|.+....+-+.+.+|..++|.|.+.+.|.+.|
T Consensus 4 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v 38 (108)
T 3m45_A 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSL 38 (108)
T ss_dssp ----CCCEECCCEEEETTSCEEEEEEESSCSSCCE
T ss_pred ccCCCccccCCeeEEEeCCcEEEEeEEcCCCccEE
Confidence 34566666666677789999999999999997754
No 196
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=96.26 E-value=0.0058 Score=39.24 Aligned_cols=51 Identities=8% Similarity=0.018 Sum_probs=35.0
Q ss_pred hcCcCCCcc--ceeeeEE-EEeecCCeEEEecceE-EeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE--EVRRRRR-RNQKNLPEIEVERSWV-HSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~-L~V~ypPeI~v~~~~V-ha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+... +..+.|. +.+.++|.|.+..+.. ....|..++|.|.+.+++.
T Consensus 82 ~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P 136 (214)
T 1ow0_A 82 TCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSP 136 (214)
T ss_dssp EEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESS
T ss_pred EEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeEC
Confidence 466666543 3445554 3678999998765432 2457999999999999643
No 197
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=96.25 E-value=0.0016 Score=43.97 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=30.8
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
|.|..||.|....+.+...+|..++|.|.+.+ .|.+.|
T Consensus 1 l~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v 39 (395)
T 1bih_A 1 LPVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKY 39 (395)
T ss_dssp ----CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEE
T ss_pred CCcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceE
Confidence 56889999999988899999999999999999 787654
No 198
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.25 E-value=0.0017 Score=38.67 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=30.5
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
...+|.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v 47 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKL 47 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEE
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEE
Confidence 445788887777788899999999999999998865
No 199
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=96.24 E-value=0.0018 Score=40.56 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=34.8
Q ss_pred cCcCCCccceeeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
|...+.+ ..++.+.|.|..+ |.|....+. ....|..++|.|.+ .+.|.+.|
T Consensus 89 C~~~~~~-~~~~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~~~l~C~~~~g~P~~~v 143 (222)
T 4i0k_A 89 CFVSIQD-FDSAAVSLQVAAPYSKPSMTLEPNK-DLRPGNMVTITCSSYQGYPEAEV 143 (222)
T ss_dssp EEEEECC-CCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEE
T ss_pred EEEEeCC-CceEEEEEEEEcCCCCCcEEeCCCc-eecCCceEEEEEecccccCCCeE
Confidence 5555432 3467778888876 888876543 34679999999999 89998765
No 200
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=96.24 E-value=0.004 Score=43.84 Aligned_cols=52 Identities=10% Similarity=0.092 Sum_probs=35.0
Q ss_pred hcCcCCCcc--ceeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKE--EVRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.+.+.+. ++++.|.+ .+.++|.|.+..+......|.+++|.|.+.++|.+
T Consensus 330 ~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~ 385 (457)
T 1hzh_H 330 KCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPS 385 (457)
T ss_dssp EEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSS
T ss_pred EEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCcEEEEEEEEeEECC
Confidence 477775433 34555655 67899999887544333345559999999998654
No 201
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=96.24 E-value=0.01 Score=39.65 Aligned_cols=52 Identities=4% Similarity=-0.033 Sum_probs=36.0
Q ss_pred cCcCCCcc-----ceeeeEEEEeecCC---------------eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 17 EEPEKDKE-----EVRRRRRRNQKNLP---------------EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 17 ~~~~~~~~-----pvs~~I~L~V~ypP---------------eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.+.+... .....+.|.|..+| .|....+.+.+.+|..++|.|.+.+.| +.|
T Consensus 122 C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v 193 (282)
T 1qok_A 122 CNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYM 193 (282)
T ss_dssp EEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCC
T ss_pred EEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceE
Confidence 66655432 22355688888754 466666677889999999999999988 544
No 202
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=96.23 E-value=0.001 Score=41.74 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=30.0
Q ss_pred eeeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeee-CC
Q psy15736 27 RRRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 27 s~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~ 66 (70)
.....|.| ..+|.|.+..+......|..++|.|.+.+. |.
T Consensus 99 ~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 143 (212)
T 1nfd_E 99 GSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPG 143 (212)
T ss_dssp CCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSS
T ss_pred CCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECC
Confidence 34566777 478999886554445679999999999998 44
No 203
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=96.21 E-value=0.0053 Score=39.53 Aligned_cols=51 Identities=10% Similarity=0.006 Sum_probs=34.7
Q ss_pred cCcCCCccc-eeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKEE-VRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~p-vs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+.... ......|.|. ++|.|.+..+......|..++|.|.+.+.|.+
T Consensus 130 C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~ 184 (254)
T 2c1o_A 130 CVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 184 (254)
T ss_dssp EEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred EEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecccCC
Confidence 777665432 2334466665 48999986555444568899999999996544
No 204
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=96.21 E-value=0.0026 Score=37.11 Aligned_cols=29 Identities=7% Similarity=-0.151 Sum_probs=22.3
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.+....+.+.+.+|..++|.|.+.+.|.
T Consensus 5 p~f~~~p~~~~v~~G~~v~L~C~~~g~p~ 33 (108)
T 3cx2_A 5 GLFVMRPQDGEVTVGGSITFSARVAGASL 33 (108)
T ss_dssp CSCSBCCCCEEEETTCCEEEEEEEECC-C
T ss_pred cEEEeCCCcEEEeCCCCEEEEEEECCCcc
Confidence 44444555677789999999999999997
No 205
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=96.20 E-value=0.0033 Score=39.08 Aligned_cols=39 Identities=15% Similarity=0.242 Sum_probs=28.8
Q ss_pred eeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeee----CCCCC
Q psy15736 28 RRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAE----PHADP 69 (70)
Q Consensus 28 ~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~----P~a~V 69 (70)
+.+.|+|.. +|.|.++.. ...|..++|.|.+.+. |.+.|
T Consensus 114 ~~~~l~V~~~~~~p~i~~~~~---~~~G~~v~L~C~~~~~~~~~p~p~v 159 (214)
T 2zg1_A 114 NKLNLEVTALIEKPDIHFLEP---LESGRPTRLSCSLPGSCEAGPPLTF 159 (214)
T ss_dssp SCEEEEEECCCCCCEEC--CC---CCTTCCEEEEEECTTCCSCSSCCEE
T ss_pred CceEEEEecCCCCCceecCcc---ccCCCeEEEEEEeccCCCCCCCceE
Confidence 578888887 678887654 3579999999999874 76654
No 206
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=96.20 E-value=0.009 Score=38.40 Aligned_cols=49 Identities=6% Similarity=-0.066 Sum_probs=31.6
Q ss_pred hcCcCCCccc-eeeeEEEEeecCC--------------eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKNLP--------------EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~ypP--------------eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+.... ....+.|.|..+| .|..+.+. .+.+|..++|.|.+.+.|
T Consensus 92 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~ 155 (247)
T 1svz_A 92 YCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPE-LKKPGETVKISCKATNYA 155 (247)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEECCCE-EECTTCCEEEEEEEESSC
T ss_pred EEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCce-eecCCCcEEEEEEEcCcc
Confidence 3666665332 3456788888763 34433443 478999999999999885
No 207
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=96.11 E-value=0.006 Score=36.71 Aligned_cols=49 Identities=10% Similarity=-0.029 Sum_probs=35.4
Q ss_pred cCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEee-eCCCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHAD 68 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~ 68 (70)
|.+.+. ..+..+.|.|.++|.+...... ...+|..++|.|.+.+ .|.+.
T Consensus 68 C~~~~~--~~s~~~~l~v~~~~~~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~ 117 (170)
T 3ry4_A 68 CQTGQT--SLSDPVHLTVLFEWLVLQTPHL-EFQEGETIMLRCHSWKDKPLVK 117 (170)
T ss_dssp EEETTS--BCCCCEEEEEECCSEEEECSCS-EECTTCCEEEEEEEGGGCCEEE
T ss_pred EEEeCC--CceEeEEEEEECCceEecCCCc-eeecCCeEEEEEECCCCCCCce
Confidence 666543 3466799999999977766544 4578999999999954 45443
No 208
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=96.11 E-value=0.0021 Score=43.38 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=39.0
Q ss_pred hcCcCCCc-cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeC-CCCC
Q psy15736 16 EEEPEKDK-EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEP-HADP 69 (70)
Q Consensus 16 ~~~~~~~~-~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P-~a~V 69 (70)
.|.+.+.. ......+.+.+..||.+..+...+.+.+|..+.|.|.+.+.| .+.|
T Consensus 106 ~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i 161 (329)
T 3oq3_B 106 LCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNI 161 (329)
T ss_dssp EEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEE
T ss_pred EEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceE
Confidence 36666655 333333446666788887777777778899999999999999 7654
No 209
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=96.07 E-value=0.0036 Score=39.38 Aligned_cols=51 Identities=8% Similarity=-0.003 Sum_probs=35.5
Q ss_pred hcCcCCCcc-ceeeeEEEEe---ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQ---KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V---~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+... .....+.|.| ..+|.|.+..+-.....|..++|.|.+.+.|.
T Consensus 110 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p 164 (237)
T 3sob_L 110 YCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYP 164 (237)
T ss_dssp EEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBS
T ss_pred EEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCC
Confidence 366655442 2345566776 78999988766555556899999999999553
No 210
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=96.07 E-value=0.0024 Score=43.04 Aligned_cols=54 Identities=19% Similarity=0.091 Sum_probs=40.6
Q ss_pred hcCcCCC-ccceeeeEEEEeecCCeEEEec-ceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNLPEIEVER-SWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~ypPeI~v~~-~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
.|.+.+. |...+..+.|.|.++|.+.... .-+...+|+.++|.|.+ .+.|.+.+
T Consensus 93 ~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v 149 (404)
T 3p3y_A 93 QCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVI 149 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEE
T ss_pred EEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeE
Confidence 4777665 4444688999999999765432 33666889999999999 88887754
No 211
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=96.06 E-value=0.0026 Score=40.37 Aligned_cols=51 Identities=10% Similarity=0.015 Sum_probs=31.9
Q ss_pred cCcCCCcc-ceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+... .....+.|.|.. +|.|.+..+......|..++|.|.+.+.|++
T Consensus 110 C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 164 (233)
T 3bqu_C 110 CLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 164 (233)
T ss_dssp EEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSS
T ss_pred EEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCC
Confidence 66655432 223345566664 8999886554444579999999999996543
No 212
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=96.04 E-value=0.0076 Score=38.96 Aligned_cols=48 Identities=6% Similarity=-0.035 Sum_probs=31.6
Q ss_pred cCcCCCc---cceeeeEEEEeecCC---------------------eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 17 EEPEKDK---EEVRRRRRRNQKNLP---------------------EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 17 ~~~~~~~---~pvs~~I~L~V~ypP---------------------eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|.+.+.. ......+.|.|..+| .|..+.+.. ..+|..++|.|.+.+.|
T Consensus 91 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~G~~v~L~C~~~~~~ 162 (256)
T 3ux9_B 91 CQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGL-VQPGGSLRLSCAASGFT 162 (256)
T ss_dssp EEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEE-ECTTCCEEEEEEEESSC
T ss_pred EEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeE-EcCCCeEEEEEEEeCCc
Confidence 5555432 234466789998876 565555444 78999999999999876
No 213
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=96.04 E-value=0.012 Score=38.19 Aligned_cols=49 Identities=6% Similarity=-0.018 Sum_probs=31.3
Q ss_pred hcCcCCCccc-eeeeEEEEeecCCe--------------EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKNLPE--------------IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~ypPe--------------I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+.... ....+.|.|..+|. |..+.+ +.+.+|..++|.|.+.+.|
T Consensus 87 ~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C~~~g~~ 150 (242)
T 2znx_A 87 FCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGP-SLVKPSQTLSLTCSVTGDS 150 (242)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEEECC-SEECTTSCEEEEEEEESSC
T ss_pred EEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCc-ceecCCCeEEEEEEEEccc
Confidence 3666665432 34567899998773 333333 3478999999999999876
No 214
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=96.03 E-value=0.0016 Score=37.05 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=26.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
||.|....+.+....|..++|.|.+.+.| +.
T Consensus 9 pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~ 39 (95)
T 2ckn_A 9 PWGVPVEVESLLVHPGDLLQLRCRLRDDV-QS 39 (95)
T ss_dssp SCCBTTBBCCEEECTTSCEEEECCEESSC-CE
T ss_pred CCEEEcCcceEEEcCCCeEEEEEECCCCC-Cc
Confidence 57777777778889999999999999998 54
No 215
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=96.02 E-value=0.0075 Score=39.31 Aligned_cols=34 Identities=24% Similarity=0.246 Sum_probs=30.2
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.||.|....+.+...+|..++|.|.+.+.|.+.|
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v 36 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIV 36 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeE
Confidence 4899988878888899999999999999998764
No 216
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=96.02 E-value=0.0083 Score=40.40 Aligned_cols=51 Identities=12% Similarity=0.060 Sum_probs=33.8
Q ss_pred cCcCCCc---cceeeeEEEEeec----CCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDK---EEVRRRRRRNQKN----LPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~---~pvs~~I~L~V~y----pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|...+.. ......+.|+|.. +|.|.+..+......|..++|.|.+.++ |.+
T Consensus 102 C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~ 160 (261)
T 2xqy_G 102 CGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP 160 (261)
T ss_dssp EEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSC
T ss_pred EEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCC
Confidence 5555532 1233567888874 7888876544444679999999999986 765
No 217
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=96.00 E-value=0.0062 Score=37.41 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=25.8
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+.||.|..+........|..++|.|.+.+.|.
T Consensus 1 Q~~P~i~~~~~~~v~~~G~~v~l~C~~~~~~~ 32 (190)
T 2wv3_A 1 QNEPRIVTSEEVIIRDSLLPVTLQCNLTSSSH 32 (190)
T ss_dssp --CCEEEECCCEECCCSSSCEEEEEEEEECSS
T ss_pred CCCCcccccceEEEccCCceEEEEEEeccCCC
Confidence 46899999877666555999999999999987
No 218
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=95.97 E-value=0.0063 Score=39.09 Aligned_cols=49 Identities=10% Similarity=-0.046 Sum_probs=33.3
Q ss_pred cCcCCCcc---ceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CC
Q psy15736 17 EEPEKDKE---EVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 17 ~~~~~~~~---pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~ 66 (70)
|...+... .....+.|+|. .+|.|.+..+ .....|..++|.|.+.++ |.
T Consensus 96 C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~-~~~~~g~~v~L~C~~~g~~P~ 152 (220)
T 2fbj_H 96 CARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTL-PPALSSDPVIIGCLIHDYFPS 152 (220)
T ss_dssp EEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECC-CSSSCCSSEEEEEEEEEEBSC
T ss_pred EEEeccccccceecCCEEEEecCCCCCCCEEEEeec-ccccCCCcEEEEEEEEeEECC
Confidence 55554432 13355688887 4688887652 234679999999999998 75
No 219
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.97 E-value=0.0038 Score=35.63 Aligned_cols=32 Identities=19% Similarity=0.136 Sum_probs=26.7
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|....+.+.+.+|..++|.|.+ +.|.+.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v 39 (103)
T 2dku_A 8 ANCFTEELTNLQVEEKGTAVFTCKT-EHPAATV 39 (103)
T ss_dssp CCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCC
T ss_pred CCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeE
Confidence 6777777777888999999999995 8888765
No 220
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=95.96 E-value=0.012 Score=36.12 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=29.1
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
||.|..+.+.+...+|..++|.|.+. +.|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v 35 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEV 35 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCC
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEE
Confidence 67788888888889999999999999 9998865
No 221
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=95.94 E-value=0.0078 Score=37.00 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=30.4
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
...+|.|++..+.+...+|..++|.|.+.+.|.+.
T Consensus 4 ~~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~ 38 (175)
T 1fnl_A 4 DLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDN 38 (175)
T ss_dssp CCCCCEEEEESCCSEEETTCCEEEEEECCCBTTBC
T ss_pred CCCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCc
Confidence 34689999998887888999999999999998775
No 222
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=95.93 E-value=0.0088 Score=33.77 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=24.0
Q ss_pred CCeEEEec-ceEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 37 LPEIEVER-SWVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 37 pPeI~v~~-~~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
||.+.+.. +.+...+|..++|.|.+. +.|.+.|
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v 43 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTL 43 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEE
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEE
Confidence 44455543 445678899999999999 5887754
No 223
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=95.92 E-value=0.0051 Score=42.14 Aligned_cols=43 Identities=14% Similarity=0.175 Sum_probs=36.7
Q ss_pred eeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 27 RRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 27 s~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.+.+.+-.+|.|.+..+.+...+|..+.|.|.+.+.|.+.|
T Consensus 148 l~~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i 190 (347)
T 2ifg_A 148 LAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQA 190 (347)
T ss_dssp SSCCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCC
T ss_pred HhcCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEE
Confidence 3455566667999999988888999999999999999999876
No 224
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.91 E-value=0.0024 Score=36.53 Aligned_cols=32 Identities=9% Similarity=-0.008 Sum_probs=26.0
Q ss_pred cCCeEEEecce---EEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEVERSW---VHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v~~~~---Vha~~G~~a~L~CiV~A~P~a 67 (70)
.||.+.+..+. +...+|..++|.|.+.+.|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~ 40 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP 40 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc
Confidence 46666666555 778999999999999999987
No 225
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=95.90 E-value=0.0058 Score=43.13 Aligned_cols=51 Identities=6% Similarity=0.039 Sum_probs=37.2
Q ss_pred hcCcCCCcc--ceeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE--EVRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~--pvs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
-|.+.+... +..+.+.+ .+..+|.|.+..+......|..++|.|.|.+++.
T Consensus 249 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P 303 (376)
T 2aty_A 249 KCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFP 303 (376)
T ss_pred EEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeEC
Confidence 355554433 45555555 7889999999877666666999999999999643
No 226
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=95.82 E-value=0.017 Score=38.30 Aligned_cols=53 Identities=11% Similarity=-0.073 Sum_probs=43.5
Q ss_pred cCc-CCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEe-eeCCCCC
Q psy15736 17 EEP-EKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVH-AEPHADP 69 (70)
Q Consensus 17 ~~~-~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~-A~P~a~V 69 (70)
|.+ .+.+...+..+.|+|..+|.+....+.+....|..+.|.|.+. +.|.+.|
T Consensus 96 C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i 150 (313)
T 4fqp_A 96 CLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQI 150 (313)
T ss_dssp EEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEE
T ss_pred EEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEE
Confidence 555 3455677889999999999999998888888899999999875 7788764
No 227
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=95.82 E-value=0.0027 Score=42.86 Aligned_cols=51 Identities=12% Similarity=0.030 Sum_probs=41.6
Q ss_pred hcCcCCCcc-ceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+... ..++.+.|+|.++|.+....+-+....|..++|.|.+.+.|.
T Consensus 81 ~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~ 132 (388)
T 2v5m_A 81 ACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVA 132 (388)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTT
T ss_pred EEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCC
Confidence 467766544 357889999999999988877778889999999999998764
No 228
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=95.77 E-value=0.015 Score=37.85 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=27.3
Q ss_pred eeeEEEEeec----CCeEEEecceEEeccC-CcEEEEEEEeee-CCC
Q psy15736 27 RRRRRRNQKN----LPEIEVERSWVHSGEG-YEAQLVCIVHAE-PHA 67 (70)
Q Consensus 27 s~~I~L~V~y----pPeI~v~~~~Vha~~G-~~a~L~CiV~A~-P~a 67 (70)
...+.|+|.. +|.|.+..+......| ..++|.|.+.++ |.+
T Consensus 111 ~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p 157 (232)
T 1dn0_B 111 GQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDS 157 (232)
T ss_dssp CCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSC
T ss_pred ccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCC
Confidence 3567888875 5888876544444578 999999999997 765
No 229
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=95.75 E-value=0.021 Score=36.65 Aligned_cols=42 Identities=19% Similarity=0.056 Sum_probs=26.5
Q ss_pred eeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 26 VRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 26 vs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
......|.|. .+|.|.+..+......|..++|.|.+.++|.+
T Consensus 117 ~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 117 WGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSS
T ss_pred eCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCC
Confidence 3455667775 78999865554444569999999999997653
No 230
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=95.72 E-value=0.013 Score=40.31 Aligned_cols=49 Identities=10% Similarity=-0.056 Sum_probs=31.3
Q ss_pred hcCcCCCccceeeeEEEEee-cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQK-NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~-ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+.+......+.+.+. .++.+..+ +.+.+.+|..++|.|.+.+.|
T Consensus 197 ~C~a~n~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~g~p 246 (438)
T 1qgc_4 197 TCEATHKTSTSPIVKSFNRNECEVMLVES-GGGLVKPGGSLKLSCTASGFI 246 (438)
T ss_dssp EEEEEETTCSSCEEEEEETTC-CCEEEEE-CCEEECTTCCEEEEEEEESSC
T ss_pred EEEEEecccCCceecccccccceeEEecC-CceEEecCCcEEEEEEEcccc
Confidence 46777665554333444433 33444444 445578999999999999998
No 231
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=95.71 E-value=0.012 Score=41.33 Aligned_cols=40 Identities=20% Similarity=0.161 Sum_probs=31.1
Q ss_pred eeeEEEEeec----CCeEEEecceEEeccCCcEEEEEEEeee-CC
Q psy15736 27 RRRRRRNQKN----LPEIEVERSWVHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 27 s~~I~L~V~y----pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~ 66 (70)
.....|.|.. +|.|....+......|..++|.|.+.+. |.
T Consensus 118 ~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 118 GKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp CCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred CCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 3556788875 7888876655556789999999999988 64
No 232
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=95.71 E-value=0.0092 Score=38.87 Aligned_cols=52 Identities=8% Similarity=-0.084 Sum_probs=37.8
Q ss_pred cCcCCCcc---ceeeeEEEEeec-----------------CCeEEEecceEEeccCCcEEEEEEEeee-CCCC
Q psy15736 17 EEPEKDKE---EVRRRRRRNQKN-----------------LPEIEVERSWVHSGEGYEAQLVCIVHAE-PHAD 68 (70)
Q Consensus 17 ~~~~~~~~---pvs~~I~L~V~y-----------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a~ 68 (70)
|.+.+... .......|.|.. +|.|....+.+.+.+|..++|.|.+.+. |.+.
T Consensus 96 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 168 (259)
T 3omz_A 96 CATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYY 168 (259)
T ss_dssp EEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCE
T ss_pred EEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCce
Confidence 66655433 455667888887 4677777777888999999999998874 5443
No 233
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=95.71 E-value=0.014 Score=36.88 Aligned_cols=52 Identities=8% Similarity=-0.020 Sum_probs=34.2
Q ss_pred hcCcCCCccceeeeEEEEeecC---CeEEEecceEEeccCC-cEEEEEEEeeeC-CCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNL---PEIEVERSWVHSGEGY-EAQLVCIVHAEP-HADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~-~a~L~CiV~A~P-~a~V 69 (70)
.|.+.+......+.+.|+|.-+ |.|....+. ...|. .++|.|.+.+.| .+.|
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~~--~~~g~~~v~L~C~~~g~~p~p~i 142 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQL--FQNMTCELHLTCSVEDADDNVSF 142 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEEEEEEECCC-----CSSEEEEEEEEEESCCTTCEE
T ss_pred EEEEEecCCCeEEEEEEEEEccCCCCeEecCcee--ecCCCceEEEEEEEecCCCceEE
Confidence 4667666666677899999766 445544322 22365 899999999964 6654
No 234
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.70 E-value=0.004 Score=35.92 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=27.6
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-||.|..+.+-+.+.+|..++|.|.+.+.|.+
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~ 38 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT 38 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc
Confidence 36888888777888999999999999998875
No 235
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=95.70 E-value=0.0093 Score=40.34 Aligned_cols=52 Identities=12% Similarity=0.175 Sum_probs=36.6
Q ss_pred hcCcCCCc--cceeeeEEE--EeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 16 EEEPEKDK--EEVRRRRRR--NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 16 ~~~~~~~~--~pvs~~I~L--~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
-|.+.+.+ .+..+.+.+ .+.++|.|.+..+-.....|..++|.|.+.++ |.+
T Consensus 105 tC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~ 161 (240)
T 4acp_A 105 KCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSD 161 (240)
T ss_dssp EEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSC
T ss_pred EEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCC
Confidence 47877766 356667663 57799999987554333459999999999995 543
No 236
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=95.67 E-value=0.017 Score=33.56 Aligned_cols=33 Identities=21% Similarity=0.093 Sum_probs=26.4
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-||.|..+-+-+...+|+.++|.|.+.+ |.+.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v 36 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHG 36 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCC
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeE
Confidence 3678888777788899999999999986 44544
No 237
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=95.66 E-value=0.011 Score=33.21 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=23.5
Q ss_pred EEEecceEEeccCCcEEEEEEEeee-CCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE-PHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~-P~a~V 69 (70)
|..+..-+.+.+|..++|.|.+.+. |.+.|
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v 34 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQV 34 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEE
Confidence 4444455677899999999999997 87754
No 238
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=95.60 E-value=0.013 Score=38.06 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=26.6
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
..+|.+....+ +....|..++|.|.+.+.|.+
T Consensus 220 ~~~p~~~~~~~-~~v~~G~~~~l~C~~~~~p~~ 251 (312)
T 2y23_A 220 KQGPHFVEYLS-WEVTGECNVLLKCKVANIKKE 251 (312)
T ss_dssp HHSSEEEEEEE-EEEETTTEEEEEEEEESCCSS
T ss_pred ccCCceeecce-EEEeCCCEEEEEEEEcCCCCC
Confidence 45688776665 667899999999999999987
No 239
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=95.58 E-value=0.01 Score=37.95 Aligned_cols=51 Identities=16% Similarity=0.077 Sum_probs=34.6
Q ss_pred cCcCCCc----cceeeeEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDK----EEVRRRRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~----~pvs~~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+.+ ......+.|.|. ++|.|.+..+. .....|..++|.|.+.+.|.+
T Consensus 94 C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~ 155 (246)
T 4dzb_B 94 CSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 155 (246)
T ss_dssp EEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCC
Confidence 6665432 234456677776 68988875432 223459999999999998865
No 240
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=95.58 E-value=0.011 Score=39.85 Aligned_cols=40 Identities=8% Similarity=0.021 Sum_probs=31.4
Q ss_pred eeEEEEeec----------------CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 28 RRRRRNQKN----------------LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 28 ~~I~L~V~y----------------pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
..+.|.|.. +|.|....+.+.+.+|..++|.|.+.+.|.+
T Consensus 134 ~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~ 189 (291)
T 2gki_A 134 QGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFN 189 (291)
T ss_dssp CCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEE
T ss_pred CCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcccc
Confidence 456888887 4566665567778899999999999988764
No 241
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=95.57 E-value=0.0081 Score=36.73 Aligned_cols=33 Identities=15% Similarity=0.085 Sum_probs=28.1
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|+.|..+.+-+...+|..++|.|.+.+.|.+.|
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v 33 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRV 33 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEE
Confidence 466777888888899999999999999887654
No 242
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=95.56 E-value=0.01 Score=35.92 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=24.2
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|..+.+.+...+|..++|.|.+.+.|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v 34 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDI 34 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeE
Confidence 456666666788899999999999999998765
No 243
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.56 E-value=0.0085 Score=35.18 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=25.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
||.|..+.+-+...+|+.++|.|.+.+.|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~ 38 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESAS 38 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCS
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCC
Confidence 4466666677888999999999999998854
No 244
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=95.55 E-value=0.018 Score=37.59 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=29.8
Q ss_pred hcCcCCCccceeeeEEEE----eecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRRN----QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~----V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+..........|. ...+|.|.+..+......|..++|.|.+.+++.
T Consensus 93 ~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~~~~~~L~C~~~g~~P 147 (231)
T 2w59_A 93 TCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEELSLSRVTLSCLVRGFRP 147 (231)
T ss_dssp EEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS
T ss_pred EEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHHhccCceEEEEEEEeccC
Confidence 366666543322222232 237899887644322233567999999999744
No 245
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=95.51 E-value=0.0018 Score=45.97 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=8.2
Q ss_pred ceeeeEEEEeecCCe----EEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 25 EVRRRRRRNQKNLPE----IEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 25 pvs~~I~L~V~ypPe----I~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
..++.+.|+|+|+|. |..+. .-.+|..++|.|.+.+.|+|
T Consensus 175 ~~s~~~~L~V~~~P~~~~~~~~p~---~l~eG~~v~l~C~~~g~~P~ 218 (291)
T 1mq8_A 175 NTSAPYQLQTFVLPATPPQLVSPR---VLEVDTQGTVVCSLDGLFPV 218 (291)
T ss_dssp ECCCCEECBC-------------------------------------
T ss_pred ccccceEEEEEecCCCCceecCCc---CccCCCeEEEEEEcCCCCCC
Confidence 467788999999953 34432 33579999999999998654
No 246
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=95.49 E-value=0.011 Score=38.36 Aligned_cols=51 Identities=10% Similarity=-0.018 Sum_probs=34.0
Q ss_pred cCcCCCcc-ceeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+... .....+.|.|. .+|.|.+..+......|..++|.|.+.+.|.+
T Consensus 126 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 180 (252)
T 3bkj_L 126 CFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPK 180 (252)
T ss_dssp EEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSS
T ss_pred EEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCC
Confidence 66666533 22344567776 47999885443334469999999999996543
No 247
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=95.48 E-value=0.0043 Score=37.77 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=23.6
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|+|+-||+| .+.+|+.|+|.|.+.+.|.+.
T Consensus 3 v~V~vp~~V-------~~~~G~~v~L~C~~~~~~~~~ 32 (225)
T 4fmk_A 3 VRVRVLPEV-------RGRLGGTVELPCHLLPPTTER 32 (225)
T ss_dssp CSEECCSEE-------EEETTSCEEECCEECSSCCCE
T ss_pred EEEEeCCEE-------EEecCCCEEEEEEEECCCCCc
Confidence 456677765 456899999999999888763
No 248
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=95.47 E-value=0.014 Score=41.54 Aligned_cols=51 Identities=8% Similarity=0.000 Sum_probs=35.4
Q ss_pred hcCcCCCccceeeeEEE---EeecCCeEEEecceE-EeccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKEEVRRRRRR---NQKNLPEIEVERSWV-HSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L---~V~ypPeI~v~~~~V-ha~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+..........| .+.++|.|.+..+.. ....|..++|.|.+.++|.
T Consensus 325 ~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P 379 (475)
T 1iga_A 325 TCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSP 379 (475)
T ss_pred EEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeEC
Confidence 57777766654333344 458999998875432 2357999999999999744
No 249
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=95.44 E-value=0.02 Score=40.03 Aligned_cols=51 Identities=12% Similarity=0.083 Sum_probs=34.7
Q ss_pred cCcCCCccc---eeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 17 EEPEKDKEE---VRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 17 ~~~~~~~~p---vs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|.+.+.... ....+.|.|. .+|.|....+......|..++|.|.+.+. |.+
T Consensus 96 C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p 154 (444)
T 1igt_B 96 CARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEP 154 (444)
T ss_dssp EEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSC
T ss_pred EEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCC
Confidence 666554322 3345677777 47888765444344789999999999996 765
No 250
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=95.44 E-value=0.015 Score=33.06 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=25.0
Q ss_pred CCeEEEecc-eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERS-WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~-~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|..+.+ .+....|..++|.|.+. .|.+.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v 39 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEV 39 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCE
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceE
Confidence 677776644 46778999999999998 787764
No 251
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=95.43 E-value=0.023 Score=39.15 Aligned_cols=36 Identities=25% Similarity=0.358 Sum_probs=29.4
Q ss_pred eecCCeEEEec-ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVER-SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~-~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..|+|.|.+.. +.+.+.+|..++|.|.+.+.|.+.+
T Consensus 201 ~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i 237 (384)
T 3kld_A 201 GEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTI 237 (384)
T ss_dssp CCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEE
T ss_pred cccCCceeecCCCceEecCCCcEEEEEEEeecCCCcE
Confidence 35788887763 4667789999999999999999865
No 252
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=95.43 E-value=0.02 Score=37.93 Aligned_cols=50 Identities=8% Similarity=-0.051 Sum_probs=31.1
Q ss_pred hcCcCCCccc-eeeeEEEEeecCCe-------------EEEe-cceEEeccCCcEEEEEEEeeeC
Q psy15736 16 EEEPEKDKEE-VRRRRRRNQKNLPE-------------IEVE-RSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 16 ~~~~~~~~~p-vs~~I~L~V~ypPe-------------I~v~-~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|.+.+.... .+....|.|..+|. +.+. .+.+.+.+|..++|.|.+.+.|
T Consensus 98 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~ 162 (276)
T 3auv_A 98 YCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFT 162 (276)
T ss_dssp EEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSC
T ss_pred EEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCcc
Confidence 3666665332 44557888888653 3332 2456778999999999999876
No 253
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=95.43 E-value=0.0079 Score=34.47 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=24.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|....+-+.+.+|..++|.|.+.+ |.+.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v 38 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANV 38 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCC
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeE
Confidence 344555555677789999999999987 66654
No 254
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=95.42 E-value=0.0066 Score=40.44 Aligned_cols=54 Identities=6% Similarity=-0.157 Sum_probs=41.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEe--cceEEeccCCcEEEEEE-----EeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVE--RSWVHSGEGYEAQLVCI-----VHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~--~~~Vha~~G~~a~L~Ci-----V~A~P~a~V 69 (70)
.|.+.+.....+..+.|.|..+|.+..+ ........|..+.|.|. +.+.|.+.|
T Consensus 97 ~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v 157 (339)
T 3o4o_C 97 VCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKI 157 (339)
T ss_dssp ECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCB
T ss_pred EEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceE
Confidence 4777777778889999999999875321 11234578999999999 788888876
No 255
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=95.42 E-value=0.0069 Score=40.90 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=28.6
Q ss_pred ecCCeEEEecceEEe---ccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHS---GEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha---~~G~~a~L~CiV~A~P~a~V 69 (70)
.|+|.|..+-+.+.. ..|..++|.|.+.+.|.+.|
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v 39 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATY 39 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEE
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEE
Confidence 578999887555554 67999999999999998764
No 256
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=95.42 E-value=0.0012 Score=41.91 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=34.6
Q ss_pred cCcCCCcc---ceeeeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKE---EVRRRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~---pvs~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+... .....+.|.| ..+|.|.+..+......|..++|.|.+.+.|.+
T Consensus 108 C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~ 165 (234)
T 2j6e_L 108 CATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPG 165 (234)
T ss_dssp EEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSC
T ss_pred EEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCC
Confidence 56655543 3345677788 378888875544334468899999999997543
No 257
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=95.42 E-value=0.013 Score=36.52 Aligned_cols=49 Identities=8% Similarity=0.040 Sum_probs=33.4
Q ss_pred cCcCCCc--cceeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 17 EEPEKDK--EEVRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 17 ~~~~~~~--~pvs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.+.+.. ...+..+.|.|. .+|.|....+ .....|..++|.|.+.+.|.
T Consensus 69 C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~l~C~~~~~~~ 122 (184)
T 2gi7_A 69 CSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPG-PAVSSGGDVTLQCQTRYGFD 122 (184)
T ss_dssp EEEEETTEEBCCCCCEEEEEESSSCCCEEEEECC-CSSCCTTCEEEEEECSSCCC
T ss_pred EEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCC-ceecCCCcEEEEEEcCCCCc
Confidence 6665543 234566778774 3788887653 34468999999999887663
No 258
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=95.39 E-value=0.0058 Score=40.89 Aligned_cols=54 Identities=4% Similarity=-0.261 Sum_probs=41.2
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecc----eEEeccCCcEEEEEEE-----eeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERS----WVHSGEGYEAQLVCIV-----HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~----~Vha~~G~~a~L~CiV-----~A~P~a~V 69 (70)
.|.+.+........+.|+|..+|.+..+.. -+...+|..+.|.|.+ .+.|.+.|
T Consensus 95 ~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v 157 (349)
T 4dep_C 95 TCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTI 157 (349)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEE
T ss_pred EEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceE
Confidence 588888888888899999998886554432 3345789999999974 77787764
No 259
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=95.39 E-value=0.011 Score=38.31 Aligned_cols=40 Identities=18% Similarity=0.256 Sum_probs=29.1
Q ss_pred eeEEEEeec------CCeEEEecce-EEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQKN------LPEIEVERSW-VHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~y------pPeI~v~~~~-Vha~~G~~a~L~CiV~A~-P~a 67 (70)
..+.|+|.. +|.|.+..+. +....|..++|.|.+.++ |.+
T Consensus 105 ~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 152 (238)
T 1bec_A 105 PGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 152 (238)
T ss_dssp CCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCC
T ss_pred CCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCC
Confidence 445677764 8999886543 233479999999999997 654
No 260
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=95.38 E-value=0.0041 Score=38.18 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=26.3
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|..+|.|.+..+.+...+|..++|.|.+.+.|.+
T Consensus 1 v~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~ 34 (176)
T 1f2q_A 1 VPQKPKVSLNPPWNRIFKGENVTLTCNGNNFFEV 34 (176)
T ss_dssp ---CCCCEEESSCSEEETTCCEEEECCTTCC---
T ss_pred CCCCCEEEcCCCCcceecCCcEEEEEeCCCCCCc
Confidence 5678999999888888999999999999999875
No 261
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=95.37 E-value=0.026 Score=35.76 Aligned_cols=52 Identities=8% Similarity=-0.191 Sum_probs=36.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeee-CCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a~V 69 (70)
.|.+.+........+.+.+. |.+...........|..+.|.|.+.+. |.|.|
T Consensus 99 ~C~a~n~~~~~~~~v~~~~~--~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i 151 (226)
T 4f80_A 99 LCYFQDGDFYEKALVELKVA--ALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQI 151 (226)
T ss_dssp EEEEEETTEEEEEEEEEEEE--BCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEE
T ss_pred EEEEECCCcEEEEEEEEeec--cceecccceeeeccCCceeeEEEeccCCCCCEE
Confidence 47777766666555555554 444445555666789999999999984 88865
No 262
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=95.34 E-value=0.02 Score=35.76 Aligned_cols=48 Identities=10% Similarity=0.001 Sum_probs=32.1
Q ss_pred cCcCCC--ccceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 17 EEPEKD--KEEVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 17 ~~~~~~--~~pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|.+.+. ....+..+.|.|.. +|.|....+. ...+|..++|.|.+.+.|
T Consensus 74 C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~-~v~~G~~v~L~C~~~~~~ 126 (188)
T 1oll_A 74 CIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGP-EVISGEKVTFYCRLDTAT 126 (188)
T ss_dssp EEEEETTEECCCCCCEEEEEESCSCCCEEEEESCS-EEETTCEEEEEEECSSSC
T ss_pred EEecCCCCCCCCCCceEEEecccCCCCeEEECCCC-ccccCCEEEEEEEcCCCC
Confidence 555442 12235667777763 7888876543 347899999999987654
No 263
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=95.29 E-value=0.0082 Score=34.46 Aligned_cols=30 Identities=17% Similarity=0.188 Sum_probs=26.1
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.||.|....+.+...+|..++|.|.+.+.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p 36 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKVA 36 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSSC
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCCC
Confidence 688888887788889999999999998764
No 264
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=95.27 E-value=0.016 Score=38.57 Aligned_cols=50 Identities=8% Similarity=0.002 Sum_probs=34.9
Q ss_pred hcCcCCCccc-----eeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEE-----VRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~p-----vs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.+.+...+ .+..+.|.|. .+|.|.+.... ....|..++|.|.+.. |.+
T Consensus 190 ~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~~-~~~ 247 (316)
T 3vh8_G 190 RCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSRS-SYD 247 (316)
T ss_dssp EEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEESS-CCS
T ss_pred EEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECCC-CCc
Confidence 3777766443 2666777775 57888887543 3478999999999974 443
No 265
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=95.19 E-value=0.025 Score=35.15 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=26.4
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|+...+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYL 33 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCE
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceE
Confidence 56677666778899999999999999987654
No 266
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=95.18 E-value=0.014 Score=33.09 Aligned_cols=31 Identities=10% Similarity=0.014 Sum_probs=23.7
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|..+.+.+.+..|..++|.|.+ +.|.+.|
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v 39 (95)
T 2k1m_A 9 SAFSKKPRSVEVAAGSPAVFEAET-ERAGVKV 39 (95)
T ss_dssp CCCSBCCCCEEEETTSCEEEEEEC-SSSSCCC
T ss_pred CeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeE
Confidence 445554456777899999999999 7887765
No 267
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=95.18 E-value=0.02 Score=35.06 Aligned_cols=46 Identities=15% Similarity=0.015 Sum_probs=31.7
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.. ..+.|.|.+. ..+.. .....|..++|.|.+.+.|.+.+
T Consensus 84 ~C~~~~~~----~~~~l~V~~~---~~~~~-~~v~~g~~~~l~C~~~~~p~~~v 129 (184)
T 2ny1_B 84 ICEVEDQK----EEVQLLVFGL---TANSD-THLLQGQSLTLTLESPPGSSPSV 129 (184)
T ss_dssp EEEETTEE----EEEEEEEEEE---EESSC-SEEETTCCEEEEEECCTTCCCEE
T ss_pred EEEEEcCC----CcEEEEEEEe---cCCCC-ceeecCCCEEEEEEcCCCCCCEE
Confidence 35555553 4677888863 33322 34478999999999999998764
No 268
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=95.18 E-value=0.053 Score=32.69 Aligned_cols=47 Identities=15% Similarity=0.202 Sum_probs=34.1
Q ss_pred ccceeeeEEEEeecCCeEEE-ecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 23 KEEVRRRRRRNQKNLPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 23 ~~pvs~~I~L~V~ypPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+......+.+.+..+|.... ....+.+..|..+.|.|.+.+.|.|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i 150 (218)
T 4frw_A 103 AGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSV 150 (218)
T ss_dssp TEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEE
T ss_pred CceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceE
Confidence 33445555666666655544 456677788999999999999999865
No 269
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=95.16 E-value=0.015 Score=36.77 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=27.9
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
+|.|.+..+.+...+|+.++|.|.+.+.|.+
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~ 31 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGS 31 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCT
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCC
Confidence 5889998888888899999999999999876
No 270
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=95.15 E-value=0.029 Score=34.86 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=26.4
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|..+.+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYL 33 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceE
Confidence 56777666778899999999999999987654
No 271
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=95.13 E-value=0.032 Score=40.31 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=36.8
Q ss_pred hcCcCCCccce-eeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 16 EEEPEKDKEEV-RRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pv-s~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
.|.+.+..... +..+.|+|.. +|.|....+.+. ..+..+.|.|.+.+ +|.+.|
T Consensus 448 ~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~-~~~~~~~l~C~~~~~~P~~~i 505 (581)
T 3o3u_N 448 RCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELT-AGVPNKVGTCVSEGSYPAGTL 505 (581)
T ss_dssp EEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEEC-TTSCEEEEEEEEEEEBSCCEE
T ss_pred EEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccc-cCCceeEEEEECCCCCCCCeE
Confidence 37776665555 7889999988 566766665532 22344567999999 598765
No 272
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=95.10 E-value=0.03 Score=32.42 Aligned_cols=29 Identities=10% Similarity=0.142 Sum_probs=22.6
Q ss_pred EEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..+...+.+.+|..++|.|.+.+.|.+.|
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v 33 (108)
T 1jhl_L 5 TQSPSYLVASPGETITINCRASKSISKSL 33 (108)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCTTCE
T ss_pred eccCCeeEEcCCCCEEEEeEECCCCCceE
Confidence 33345677889999999999999886654
No 273
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=95.09 E-value=0.03 Score=35.47 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=20.7
Q ss_pred EecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 42 VERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 42 v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|..-|.+.+|..|+|.|.+.+.|.+
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~ 34 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSA 34 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCC
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCC
Confidence 34455777899999999999887765
No 274
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=95.08 E-value=0.015 Score=34.97 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=27.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.+....+-+...+|..++|.|.+.+.|.+.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v 34 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 34 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEE
Confidence 566777766778889999999999999998754
No 275
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=95.04 E-value=0.014 Score=37.38 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=29.1
Q ss_pred eeeeEEEEeec------CCeEEEecceEE-eccCCcEEEEEEEeeeCC
Q psy15736 26 VRRRRRRNQKN------LPEIEVERSWVH-SGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 26 vs~~I~L~V~y------pPeI~v~~~~Vh-a~~G~~a~L~CiV~A~P~ 66 (70)
....+.|.|.- +|.|.+..+... ...|..++|.|.+.+++.
T Consensus 106 ~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p 153 (245)
T 3nfj_J 106 FGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFP 153 (245)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBS
T ss_pred ECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcC
Confidence 34556777775 898887654333 234999999999999644
No 276
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=95.02 E-value=0.0075 Score=40.88 Aligned_cols=40 Identities=20% Similarity=0.177 Sum_probs=22.8
Q ss_pred eeEEEEeec----CCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQKN----LPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~y----pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
..+.|.|.. +|.|.+..+......|..++|.|.+.++ |.+
T Consensus 120 ~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~p 164 (257)
T 3bn9_D 120 QGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 164 (257)
T ss_dssp CCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSC
T ss_pred CcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCC
Confidence 456888875 7888876544445679999999999997 776
No 277
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=95.02 E-value=0.026 Score=37.99 Aligned_cols=32 Identities=25% Similarity=0.285 Sum_probs=26.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|..+.+. .+.+|+.++|.|.+.+.|.+.|
T Consensus 1 ~P~i~~~~~~-~~~~G~~v~l~C~~~g~p~p~v 32 (389)
T 2jll_A 1 QPHIIQLKNE-TTYENGQVTLVCDAEGEPIPEI 32 (389)
T ss_dssp CCEEEECCCE-EEETTSEEEEEEEEECSSCCEE
T ss_pred CCeEEecCce-EEeCCCeEEEEEEeecccCCeE
Confidence 6888886654 3466999999999999998865
No 278
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=94.97 E-value=0.025 Score=34.30 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=26.1
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeC-CCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEP-HAD 68 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P-~a~ 68 (70)
|+.|.++.+.+...+|..++|.|.+.+.| .+.
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~ 34 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKD 34 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCce
Confidence 56777777788889999999999999987 443
No 279
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=94.94 E-value=0.022 Score=36.49 Aligned_cols=48 Identities=4% Similarity=-0.030 Sum_probs=30.5
Q ss_pred cCcCCCcc-ceeeeEEEEeecC--------------------CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQKNL--------------------PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~yp--------------------PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|.+.+... .......|.|..+ +.+..+ +.+.+.+|..++|.|.+.+.|
T Consensus 91 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~ 159 (250)
T 3esu_F 91 CQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPELVKPGASVKISCKDSGYA 159 (250)
T ss_dssp EEECSSSSCEECCCEEEEEC------------------------CEEC-CCEEECTTCCEEEEEECCSTT
T ss_pred EEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecC-CceEEcCCceEEEEEEecCCc
Confidence 66655432 2345567888774 234444 445678999999999999876
No 280
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=94.92 E-value=0.018 Score=39.01 Aligned_cols=40 Identities=8% Similarity=0.075 Sum_probs=33.6
Q ss_pred hcCcCCC--ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 16 EEEPEKD--KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 16 ~~~~~~~--~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.|.+.+. ...+++.+.|.|. .| .|..++|.|.+.+.|.+.
T Consensus 271 ~C~a~n~~~~g~~~~~~~l~V~---~v----------~g~~~~l~C~~~g~p~p~ 312 (363)
T 1wio_A 271 NLTLALEAKTGKLHQEVNLVVM---RA----------TQLQKNLTCEVWGPTSPK 312 (363)
T ss_dssp EEEECBTTTTCCEEEEEEEEEE---EE----------CCCSSSEEEEEESSCCTT
T ss_pred EEEEEEhhhcCeEEEEEeEEEE---Ee----------cCCCeeEEEEEccccCCC
Confidence 4888888 6688999999998 11 199999999999999887
No 281
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=94.89 E-value=0.02 Score=34.38 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=26.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+|.|.+..+.+....|..++|.|.+.+.|.
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~ 33 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPE 33 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSS
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCC
Confidence 578888888888889999999999999973
No 282
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=94.88 E-value=0.015 Score=41.28 Aligned_cols=51 Identities=14% Similarity=0.101 Sum_probs=34.1
Q ss_pred hcCcCCCcc-ceeeeEEEEee------------------cCCeEEEecceEEe-ccCCcEEEEEEEeeeCC
Q psy15736 16 EEEPEKDKE-EVRRRRRRNQK------------------NLPEIEVERSWVHS-GEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 16 ~~~~~~~~~-pvs~~I~L~V~------------------ypPeI~v~~~~Vha-~~G~~a~L~CiV~A~P~ 66 (70)
.|.+.+... .+++.+.|+|. .+|.|.+..+.... .+|..++|.|.+.+.|.
T Consensus 206 ~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p 276 (475)
T 1iga_A 206 TCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRD 276 (475)
T ss_pred EEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccC
Confidence 376666543 24566666563 36777665544443 78999999999998754
No 283
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=94.88 E-value=0.02 Score=37.29 Aligned_cols=51 Identities=12% Similarity=0.050 Sum_probs=33.8
Q ss_pred hcCcCCCc--cceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDK--EEVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~--~pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+.. ...+..+.|.|.. +|.|....+. ...+|..++|.|.+.+.|.+
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~~ 135 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGL-VLMPGENISLTCSSAHIPFD 135 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEECSSCCCEEEESSCS-EECTTCCCEEEEECSSSCCS
T ss_pred EEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCCC-ccCCCCCEEEEEeCCCCCCC
Confidence 36666542 3345667888864 7888765432 34689999999966555554
No 284
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=94.84 E-value=0.016 Score=39.56 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=36.4
Q ss_pred cCcCCCccceeeeEEEEeecCCeE---EEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQKNLPEI---EVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~ypPeI---~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|...-.+....+.+.|.|.++|+. ....+| ..+|++.+|.|.|++...
T Consensus 68 C~~~c~~~~~~~~v~l~Vy~~P~~v~i~~~~~~--~~~G~~~tL~C~v~~~~P 118 (196)
T 3bn3_B 68 CFFRCARRTLQARGLIRTFQRPDRVELMPLPPW--QPVGENFTLSCRVPGAGP 118 (196)
T ss_dssp EEEEETTEEEEEECEEEEEBCCCCCEECCCCSS--EETTSEEEEEEEETTCBC
T ss_pred EEEECCCCceEEEEEEEEecCCCcCEEccCCcc--ccCCCcEEEEEEeCCccC
Confidence 555556788999999999998864 333344 467999999999998433
No 285
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=94.82 E-value=0.019 Score=37.37 Aligned_cols=51 Identities=18% Similarity=0.139 Sum_probs=33.9
Q ss_pred cCcCC--CccceeeeEEEEeec------CCeEEEecce-EEeccCCcEEEEEEEeeeCCC
Q psy15736 17 EEPEK--DKEEVRRRRRRNQKN------LPEIEVERSW-VHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~--~~~pvs~~I~L~V~y------pPeI~v~~~~-Vha~~G~~a~L~CiV~A~P~a 67 (70)
|.+.+ ..........|.|.- +|.|.+..+- .....|..++|.|.+.++|.+
T Consensus 117 C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~ 176 (268)
T 3pl6_D 117 CATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 176 (268)
T ss_dssp EEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCC
Confidence 66554 333444566777765 8888775332 223459999999999997765
No 286
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=94.82 E-value=0.02 Score=33.70 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=25.8
Q ss_pred ecCCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
..+|.+..+ .+.+.+.+|..++|.|.+ +.|.+.|
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v 47 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEV 47 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCC
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEE
Confidence 346666555 344778899999999999 7888765
No 287
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=94.80 E-value=0.028 Score=35.40 Aligned_cols=44 Identities=23% Similarity=0.165 Sum_probs=31.0
Q ss_pred hcCcCCCccceeeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+... ++.+.|+|.-+ |.|....+ ..+|.|.+.+.|.+.+
T Consensus 76 ~C~~~n~~~--~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i 122 (171)
T 1ccz_A 76 EMESPNITD--TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVEL 122 (171)
T ss_dssp EEECTTCCS--CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEE
T ss_pred EEEEeCCCC--cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEE
Confidence 466665544 78899999876 55554332 2489999999998764
No 288
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=94.79 E-value=0.047 Score=34.24 Aligned_cols=38 Identities=11% Similarity=0.037 Sum_probs=27.7
Q ss_pred eeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeee
Q psy15736 26 VRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 26 vs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.+..+.|.|.. +|.|.+..+. ...+|..++|.|.+.+.
T Consensus 94 ~s~~~~l~V~~~~~~p~i~~~p~~-~v~~G~~v~L~C~~~~~ 134 (201)
T 1nkr_A 94 PSDPLDIVIIGLYEKPSLSAQPGP-TVLAGENVTLSCSSRSS 134 (201)
T ss_dssp CCCCEEEEEECSSCCCEEEEESCS-EECTTCEEEEEEEESSC
T ss_pred CCCCEEEEeeccCCCCceecCCCC-ccCCCCeEEEEEeCCCC
Confidence 35556677754 5899887552 44789999999998863
No 289
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=94.76 E-value=0.044 Score=31.99 Aligned_cols=31 Identities=10% Similarity=0.141 Sum_probs=23.5
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v 35 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYL 35 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcE
Confidence 4445455678899999999999998875543
No 290
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.68 E-value=0.011 Score=34.69 Aligned_cols=31 Identities=16% Similarity=0.013 Sum_probs=25.2
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
||.|..+.+-+...+|+.+.|.|.+ .|.+.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v 37 (100)
T 2yuz_A 7 GLKILTPLTDQTVNLGKEICLKCEI--SENIPG 37 (100)
T ss_dssp CCCCSBCCCCEEEETTSCCCEEEEC--SSCCCE
T ss_pred CCEEeccCCceEEcCCCCEEEEEEe--CCCCeE
Confidence 6677766667788899999999999 787764
No 291
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=94.68 E-value=0.057 Score=34.10 Aligned_cols=49 Identities=10% Similarity=0.050 Sum_probs=32.0
Q ss_pred cCcCCCc--cceeeeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEee-eCC
Q psy15736 17 EEPEKDK--EEVRRRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPH 66 (70)
Q Consensus 17 ~~~~~~~--~pvs~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~ 66 (70)
|...+.. ......+.|.|. .+|.|....+... ..|..++|.|.+.+ .|.
T Consensus 98 C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~ 153 (221)
T 3m8o_H 98 CVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST-QPDGNVVIACLVQGFFPQ 153 (221)
T ss_dssp EEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC-CCTTEEEEEEEEEEEBSS
T ss_pred EEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc-ccCCCEEEEEEEEeeECC
Confidence 5555442 234455677775 6788873322222 68999999999999 665
No 292
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=94.67 E-value=0.035 Score=36.21 Aligned_cols=29 Identities=10% Similarity=0.059 Sum_probs=24.1
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeee
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.+|.|....+.+.+.+|..++|.|.+.+.
T Consensus 136 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 136 SEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp --CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred CccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 38889888888888899999999999865
No 293
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=94.64 E-value=0.025 Score=36.26 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=28.6
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
-+|.|.+..+++...+|..++|.|.+.+.|.+.
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~ 38 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQ 38 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCC
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCc
Confidence 468888888878888999999999999998764
No 294
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=94.62 E-value=0.011 Score=36.69 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=27.5
Q ss_pred eecCCeEEEec----ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVER----SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~----~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
...+|.+..+. ..+...+|..++|.|.+.+.|.+.|
T Consensus 12 ~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v 51 (231)
T 3ojm_B 12 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTM 51 (231)
T ss_dssp -CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEE
T ss_pred CccCCccccccccCceeEEEccCCCEEEEEecccCCCCeE
Confidence 34566665554 6777789999999999999998764
No 295
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=94.60 E-value=0.0091 Score=39.23 Aligned_cols=54 Identities=11% Similarity=-0.001 Sum_probs=37.0
Q ss_pred hcCcCCCccceeeeEEEEe-ecCCeEEEecc---eEEeccCCcEEEEEEE------eeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQ-KNLPEIEVERS---WVHSGEGYEAQLVCIV------HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V-~ypPeI~v~~~---~Vha~~G~~a~L~CiV------~A~P~a~V 69 (70)
.|.+.+........+.|.| .++|.+..... ......|..++|.|.+ .+.|.+.|
T Consensus 78 ~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i 141 (315)
T 1itb_B 78 YCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 141 (315)
T ss_dssp EECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCC
T ss_pred EEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEE
Confidence 4778777666666666663 46676643321 2345679999999999 89998865
No 296
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=94.53 E-value=0.072 Score=35.35 Aligned_cols=41 Identities=10% Similarity=-0.029 Sum_probs=29.9
Q ss_pred cceeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 24 EEVRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 24 ~pvs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
...+..+.|.|.+ +|.|......+ ..+|..++|.|.+...|
T Consensus 103 ~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~~~ 146 (316)
T 3vh8_G 103 SAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDIMF 146 (316)
T ss_dssp CCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESSCC
T ss_pred ecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCCCC
Confidence 3456677777754 57888776555 57899999999996543
No 297
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=94.48 E-value=0.031 Score=34.74 Aligned_cols=34 Identities=12% Similarity=-0.079 Sum_probs=27.0
Q ss_pred EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 33 NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 33 ~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.+..+|.|.+..+. ...+|..++|.|.+.+ |.+.
T Consensus 4 ~~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~ 37 (184)
T 2gi7_A 4 GPLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDL 37 (184)
T ss_dssp CCBCCCEEEEESCS-EEETTCCEEEEEECST-TCSE
T ss_pred CCCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCE
Confidence 35678999998775 5688999999999887 5443
No 298
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=94.41 E-value=0.045 Score=33.41 Aligned_cols=50 Identities=8% Similarity=-0.197 Sum_probs=34.3
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEe-eeCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVH-AEPHAD 68 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~-A~P~a~ 68 (70)
.|.+.+.. .+..+.|.|..+|.+....+ .....|..++|.|.+. +.|.+.
T Consensus 67 ~C~~~~~~--~s~~~~l~V~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~ 117 (176)
T 1f2q_A 67 KCQHQQVN--ESEPVYLEVFSDWLLLQASA-EVVMEGQPLFLRCHGWRNWDVYK 117 (176)
T ss_dssp EEECTTSS--CCCCEEEEEECSSEEEEESC-SEEETTSCEEEEEEEGGGCCEEE
T ss_pred EEEcCCcc--ccccEEEEEeCcceeecCCc-ceeeCCCCEEEEEEecCCCCceE
Confidence 36666544 35678888887776655443 3456899999999995 455443
No 299
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=94.40 E-value=0.029 Score=35.81 Aligned_cols=43 Identities=19% Similarity=0.113 Sum_probs=30.3
Q ss_pred cceeeeEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEeeeCC
Q psy15736 24 EEVRRRRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 24 ~pvs~~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~P~ 66 (70)
......+.|.|. .+|.|.+..+- .....|..++|.|.+.++|.
T Consensus 104 ~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p 153 (245)
T 4ei6_B 104 QFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 153 (245)
T ss_dssp CEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBS
T ss_pred EEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeC
Confidence 344566778887 78988875432 22345999999999999654
No 300
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=94.35 E-value=0.024 Score=35.92 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=28.1
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
...|.|.+.-+.+...+|..+.|.|.+.+.|.+.|
T Consensus 16 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v 50 (218)
T 3k0w_A 16 PRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQY 50 (218)
T ss_dssp ---CCEEECCCCEEEETTSBEEEECEETTTTSSEE
T ss_pred CCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEE
Confidence 45677888878888899999999999999998754
No 301
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=94.30 E-value=0.014 Score=35.51 Aligned_cols=33 Identities=12% Similarity=0.072 Sum_probs=27.8
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
++.|..+.+.+...+|..+.|.|.+.+.|.+.|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v 36 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRV 36 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEE
Confidence 567777777888889999999999999887654
No 302
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.26 E-value=0.054 Score=31.04 Aligned_cols=22 Identities=23% Similarity=0.252 Sum_probs=18.6
Q ss_pred EEeccCCcEEEEEEEeeeCCCCC
Q psy15736 47 VHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 47 Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.+..|..+.|.|.+. .|.+.|
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v 44 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEV 44 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCC
T ss_pred EEEEcCCeEEEEEEec-CCCCeE
Confidence 6678899999999995 787765
No 303
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=94.26 E-value=0.025 Score=35.11 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=24.2
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|..+. .+.+.+|..++|.|.+.+.|.+.|
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v 32 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYV 32 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCE
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceE
Confidence 4455555 667788999999999998887764
No 304
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=94.24 E-value=0.1 Score=34.55 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=32.6
Q ss_pred cCcCCCcc-ceeeeEEEEeecCC------------------eEEEe-cceEEeccCCcEEEEEEEeeeCC
Q psy15736 17 EEPEKDKE-EVRRRRRRNQKNLP------------------EIEVE-RSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 17 ~~~~~~~~-pvs~~I~L~V~ypP------------------eI~v~-~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.+.+... .....+.|.|..+| .+.+. .+.+.+.+|..++|.|.+.+.|.
T Consensus 98 C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 167 (264)
T 2gjj_A 98 CQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSF 167 (264)
T ss_dssp EEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCG
T ss_pred EEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCcc
Confidence 66655432 23456789998874 33332 22345789999999999998874
No 305
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=94.24 E-value=0.021 Score=34.75 Aligned_cols=42 Identities=12% Similarity=-0.026 Sum_probs=24.8
Q ss_pred eeEEEEeecCCeE-EEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 28 RRRRRNQKNLPEI-EVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 28 ~~I~L~V~ypPeI-~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
......+.+.|.. ......+.+..|..++|.|.+.+.|.+.|
T Consensus 28 ~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i 70 (145)
T 1z9m_A 28 DKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSL 70 (145)
T ss_dssp ----------CCTTCCBCCCEEEETTSCEEEEEECSCCTTCCE
T ss_pred HhHhhhheecccceecCCceEEEEcCCCEEEEEEEcCCCCcEE
Confidence 3344444444433 45556678899999999999999987654
No 306
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=94.17 E-value=0.083 Score=39.91 Aligned_cols=46 Identities=13% Similarity=0.005 Sum_probs=33.9
Q ss_pred ccceeeeEEEEee---cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 23 KEEVRRRRRRNQK---NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 23 ~~pvs~~I~L~V~---ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.-+...+.+.+. .||.+..++ -+.+..|..++|.|.+.+.|.+.|
T Consensus 148 G~~~~~~v~~~~~~~~~~p~~~~~~-~~~v~~G~~v~l~C~~~g~P~p~i 196 (731)
T 2v5y_A 148 GYLAIDEVKVLGHPCTRTPHFLRIQ-NVEVNAGQFATFQCSAIGRTVAGD 196 (731)
T ss_dssp CEEEECCBEEESSCCSSSCEECCCC-CEEEETTSCEEEEEEEESCCCTTC
T ss_pred eEEEEeeEEeeeccccccccccccc-ceEEeCCCcEEEEEEeCCCCCCce
Confidence 3344445554443 688887554 577789999999999999999875
No 307
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=94.16 E-value=0.041 Score=35.13 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=30.0
Q ss_pred ceeeeEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEee-eCCC
Q psy15736 25 EVRRRRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 25 pvs~~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A-~P~a 67 (70)
.......|.|. .+|.|.+..+. .....|..++|.|.+.+ .|.+
T Consensus 103 ~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 153 (240)
T 3q5y_A 103 YFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDH 153 (240)
T ss_dssp EECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCC
Confidence 34456677776 88998875432 23346999999999999 4544
No 308
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=94.09 E-value=0.023 Score=36.79 Aligned_cols=53 Identities=13% Similarity=0.035 Sum_probs=33.9
Q ss_pred hcCcCCCccc---eeeeEEEEeecCCeEEEec--c--eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEE---VRRRRRRNQKNLPEIEVER--S--WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~p---vs~~I~L~V~ypPeI~v~~--~--~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|.+.+.... .+..+.|.|..|+...++. . .+....|..+.|.|.+. .|.+.+
T Consensus 67 ~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v 126 (289)
T 3mjg_X 67 FCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVV 126 (289)
T ss_dssp EEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCE
T ss_pred EEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceE
Confidence 4667665533 5677788887554433321 1 26678999999999999 777654
No 309
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=94.06 E-value=0.11 Score=34.53 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=25.8
Q ss_pred eeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|.|. .+|.|.+..+......|..++|.|.+.++++
T Consensus 128 ~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P 170 (248)
T 3u2s_H 128 KGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 170 (248)
T ss_dssp CCEEEEECSCCCBCCEEEEECCC------CEEEEEEEEEEEBS
T ss_pred CCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEEeeEEC
Confidence 44567776 8899997666555566999999999999653
No 310
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=94.05 E-value=0.055 Score=35.04 Aligned_cols=32 Identities=16% Similarity=0.009 Sum_probs=26.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeee-CCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAE-PHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a~V 69 (70)
+|.+..+.+ ....+|..++|.|.+.+. |.+.|
T Consensus 117 ~P~~~~~~~-~~v~~g~~v~l~C~v~g~~P~p~i 149 (207)
T 3rbs_A 117 GPHFVEYLS-WEVTGECNVLLKCKVANIKKETHI 149 (207)
T ss_dssp SSEEEEEEE-EEEETTTEEEEEEEEESCCTTCEE
T ss_pred CCceEecCC-cEEcCCCcEEEEEEEeCCCCCCEE
Confidence 788776654 556789999999999999 88865
No 311
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=94.05 E-value=0.023 Score=32.84 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=20.5
Q ss_pred ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+-|.+.+|..++|.|.|.+ |.|.|
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v 27 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPV 27 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEE
Confidence 4578899999999999966 88876
No 312
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=94.05 E-value=0.053 Score=33.63 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=24.5
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeee-CCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAE-PHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a~V 69 (70)
|.|..+. .+.+.+|..++|.|.+.+. |.+.|
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v 33 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTI 33 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEE
Confidence 4555555 6778899999999999998 77654
No 313
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=94.03 E-value=0.11 Score=33.35 Aligned_cols=39 Identities=18% Similarity=0.064 Sum_probs=29.5
Q ss_pred eeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|+| ..+|.|.+..+......|..++|.|.+.+++.
T Consensus 115 ~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P 157 (230)
T 3n9g_H 115 QGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 157 (230)
T ss_dssp CCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBS
T ss_pred CCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEEC
Confidence 4456777 47888887655555568999999999999754
No 314
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=94.02 E-value=0.054 Score=36.23 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=30.5
Q ss_pred eeeeEEEEeec---------------CCeEEEecceEEeccCCcEEEEEEEee
Q psy15736 26 VRRRRRRNQKN---------------LPEIEVERSWVHSGEGYEAQLVCIVHA 63 (70)
Q Consensus 26 vs~~I~L~V~y---------------pPeI~v~~~~Vha~~G~~a~L~CiV~A 63 (70)
......|.|.. +|.|..+.+ +.+.+|..++|.|.+.+
T Consensus 114 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 114 WGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp ECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 44567788877 777877766 88899999999999998
No 315
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=93.94 E-value=0.068 Score=31.08 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=22.0
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|..+.+.+.+.+|..++|.|.+.+.|.+.
T Consensus 4 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~ 32 (108)
T 1qfw_M 4 LTQSPKSMSMSVGERVTLSCKASETVDSF 32 (108)
T ss_dssp EEEECSCEECCTTCCEEEEEEESSCCCSC
T ss_pred EEEeCCeEEEcCCCCEEEEeeeCCCCCcE
Confidence 33444567889999999999999887543
No 316
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=93.93 E-value=0.066 Score=34.20 Aligned_cols=24 Identities=13% Similarity=-0.007 Sum_probs=19.5
Q ss_pred eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+...+|..++|.|.+.+.|.+.|
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i 33 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFF 33 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeE
Confidence 344458999999999999998764
No 317
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=93.87 E-value=0.099 Score=34.21 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=39.0
Q ss_pred hcCcCCC-ccceeeeEEEEeecCCeEEEe--cceEEeccCCcEEEEEEE-eeeCCCCC
Q psy15736 16 EEEPEKD-KEEVRRRRRRNQKNLPEIEVE--RSWVHSGEGYEAQLVCIV-HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~-~~pvs~~I~L~V~ypPeI~v~--~~~Vha~~G~~a~L~CiV-~A~P~a~V 69 (70)
.|.+.+. +...+..+.|.|..+|.+..- ...+....|..+.|.|.+ .+.|.+.|
T Consensus 90 ~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i 147 (308)
T 4fom_A 90 ICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHI 147 (308)
T ss_dssp EEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEE
T ss_pred EEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceE
Confidence 3666553 556778888999888876543 334445778999999975 68998765
No 318
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=93.84 E-value=0.16 Score=32.77 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=29.4
Q ss_pred eeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|.| ..+|.|.+..+......|..++|.|.+.++++
T Consensus 116 ~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p 158 (226)
T 3mlr_H 116 QGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 158 (226)
T ss_dssp CCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBS
T ss_pred CccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEEC
Confidence 3446666 57888987655555668999999999999754
No 319
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=93.81 E-value=0.079 Score=32.81 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=23.5
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNL 33 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCE
Confidence 344445677789999999999999987754
No 320
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=93.81 E-value=0.085 Score=31.74 Aligned_cols=29 Identities=10% Similarity=0.202 Sum_probs=22.4
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|....+.+.+.+|..++|.|.+.+.|.+.
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~ 34 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKK 34 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTC
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCce
Confidence 44444567788999999999999887554
No 321
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=93.80 E-value=0.015 Score=37.81 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=16.8
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|+...+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 34 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYI 34 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEE
Confidence 577777778889999999999999998886543
No 322
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=93.76 E-value=0.12 Score=30.93 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=22.4
Q ss_pred cCCeEEEe-cceEEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-||.|.+- +.. ...|..++|.|.|.++..+
T Consensus 3 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gfyP~ 33 (99)
T 1lk2_B 3 KTPQIQVYSRHP--PENGKPNILNCYVTQFHPP 33 (99)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSS
T ss_pred cCCEEEEEcCCc--ccCCCCEEEEEEEEEEECC
Confidence 48999983 443 3468899999999997544
No 323
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=93.71 E-value=0.061 Score=34.90 Aligned_cols=35 Identities=14% Similarity=-0.020 Sum_probs=28.0
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeee-CCCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHADP 69 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a~V 69 (70)
...+|.+..+.. +...+|..++|.|.+.+. |.+.|
T Consensus 4 ~~~~P~~~~~~~-~~v~~G~~v~l~C~~~~~~p~~~v 39 (317)
T 2y25_A 4 PFTGPHFVEYLS-WEVTGECNVLLKCKVANIKKETHI 39 (317)
T ss_dssp SSSCCEEEEEEE-EEEETTTEEEEEEEEESCCTTCEE
T ss_pred ccCCCcEeeeee-EEECCCCeEEEEEEEcCCCCCCEE
Confidence 346888887765 777899999999999998 66654
No 324
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=93.69 E-value=0.047 Score=35.67 Aligned_cols=42 Identities=21% Similarity=0.221 Sum_probs=29.2
Q ss_pred eeeeEEEEeec------CCeEEEecceE-EeccCCcEEEEEEEee-eCCC
Q psy15736 26 VRRRRRRNQKN------LPEIEVERSWV-HSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 26 vs~~I~L~V~y------pPeI~v~~~~V-ha~~G~~a~L~CiV~A-~P~a 67 (70)
....+.|.|.- +|.|.+..+.. ....|..++|.|.+.+ .|.+
T Consensus 131 ~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 180 (270)
T 3qib_D 131 FGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 180 (270)
T ss_dssp ECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred ECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCC
Confidence 34556778776 88887754322 2345999999999999 5554
No 325
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=93.66 E-value=0.1 Score=34.18 Aligned_cols=21 Identities=14% Similarity=0.093 Sum_probs=17.6
Q ss_pred eEEeccCCcEEEEEEEeeeCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~ 66 (70)
-+...+|..++|.|.+.+.|.
T Consensus 160 ~~~v~~G~~v~L~C~~~~~~~ 180 (268)
T 1x9q_A 160 GGLVQPGGAMKLSCVTSGFTF 180 (268)
T ss_dssp CEEECTTCCEEEEEEEESSCG
T ss_pred ceEecCCCcEEEEEEecCccc
Confidence 456788999999999998763
No 326
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=93.65 E-value=0.093 Score=30.44 Aligned_cols=29 Identities=10% Similarity=0.284 Sum_probs=22.0
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|......+.+.+|+.++|.|.+.+.|.+.
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~ 32 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDD 32 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCc
Confidence 33334567789999999999999877554
No 327
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=93.64 E-value=0.059 Score=34.80 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=31.3
Q ss_pred hcCcCCCccc--eeeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEE--VRRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~p--vs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|++.+.... .++.+.|+|..+ |.|... +..++|.|.+.+.|.+.+
T Consensus 82 ~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~~--------~~~v~L~C~~~~~p~~~~ 132 (182)
T 1hnf_A 82 KVSIYDTKGKNVLEKIFDLKIQERVSKPKISWT--------CINTTLTCEVMNGTDPEL 132 (182)
T ss_dssp EEEEEETTSCEEEEEEEEEEEECCCCCCEEEEE--------TTTTEEEEECSSCSSCEE
T ss_pred EEEEEeCCCceeEEEEEEEEEcCcCCCCEEEEc--------cCcEEEEeEccCCCCCEE
Confidence 3666654333 357788999863 555542 347999999999987654
No 328
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=93.64 E-value=0.045 Score=38.72 Aligned_cols=50 Identities=16% Similarity=0.090 Sum_probs=37.4
Q ss_pred hcCcCCCccceeeeEEEEeecCCeE---EEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEI---EVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI---~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.....+....+.+.|.|.++|.. .....+ ..+|+.++|.|.|.+.+.+
T Consensus 64 ~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~--~~~G~~~~LtC~v~g~~P~ 116 (291)
T 1mq8_A 64 MCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSW--QPVGKNLTLRCQVEGGAPR 116 (291)
T ss_dssp EEEEECSSCEEEEECEEEECBCCSCCCBCCCCSB--CCSSCCCEEEEEECCCBST
T ss_pred EEEEEcCCccEEEEEEEEEecCCCCCEEecCCcc--ccCCCCEEEEEEecCccCC
Confidence 3666666678899999999999864 332223 4679999999999986544
No 329
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=93.63 E-value=0.019 Score=36.30 Aligned_cols=24 Identities=13% Similarity=0.140 Sum_probs=21.1
Q ss_pred eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-+.+..|..++|.|.+.|.|.|.|
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P~i 50 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAPTV 50 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCCEE
T ss_pred CEEEeCCCeEEEEEEEEEcCCCeE
Confidence 456688999999999999999875
No 330
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=93.56 E-value=0.13 Score=30.74 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=22.2
Q ss_pred cCCeEEE-ecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-||.|.+ ++.. ...|..++|.|.|.++..+
T Consensus 4 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gFyP~ 34 (100)
T 1k5n_B 4 RTPKIQVYSRHP--AENGKSNFLNCYVSGFHPS 34 (100)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSS
T ss_pred CCCEEEEEeCCc--ccCCCcEEEEEEEEeeECC
Confidence 4789988 4433 3567899999999997444
No 331
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=93.54 E-value=0.14 Score=33.28 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=27.2
Q ss_pred eeEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|.|. .+|.|.+..+......|..++|.|.+.++++
T Consensus 127 ~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p 169 (239)
T 3tv3_H 127 RGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 169 (239)
T ss_dssp CCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBS
T ss_pred CCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeC
Confidence 44566664 7888886655444456999999999999543
No 332
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=93.52 E-value=0.05 Score=35.52 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=27.3
Q ss_pred eEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEeee-CCC
Q psy15736 29 RRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 29 ~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~-P~a 67 (70)
.+.|.|. .+|.|.+..+. +....|..++|.|.+.++ |.+
T Consensus 108 ~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 154 (252)
T 1oga_E 108 GTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 154 (252)
T ss_dssp CEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred CEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCC
Confidence 3456664 68999886433 233469999999999996 653
No 333
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=93.50 E-value=0.064 Score=33.99 Aligned_cols=45 Identities=18% Similarity=0.119 Sum_probs=30.7
Q ss_pred hcCcCCCccceeeeEEEEeecC---CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNL---PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~yp---PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|...+.. ...+.+.|+|.-+ |.|.+ .+..++|.|.+...|.+.|
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~gp~p~i 132 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEGTDVEL 132 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSCTTCEE
T ss_pred EEEEEcCC-eEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCCCCCEE
Confidence 36655555 6778899999765 55544 2467999999933387754
No 334
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=93.49 E-value=0.08 Score=30.69 Aligned_cols=22 Identities=18% Similarity=0.228 Sum_probs=17.7
Q ss_pred eEEeccCCcEEEEEEEeeeCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.+...+|..++|.|.+.+.|.+
T Consensus 17 ~v~v~~G~~v~L~C~~~g~p~~ 38 (122)
T 3s35_X 17 GIELSVGEKLVLNCTARTELNV 38 (122)
T ss_dssp CEEEEETCCEEEEEEEEECTTC
T ss_pred CEEEecCCeEEEEEEEEcCCCC
Confidence 3455679999999999997654
No 335
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=93.45 E-value=0.07 Score=33.13 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=25.2
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.-+|.|++..+. ...+|..++|.|.+.+.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~ 33 (198)
T 1ugn_A 3 LPKPTLWAEPGS-VITQGSPVTLRCQGGQETQ 33 (198)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCTTCC
T ss_pred CCCCeEeccCCC-cccCCCcEEEEEEecCCCc
Confidence 357888887664 5678999999999998875
No 336
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=93.44 E-value=0.076 Score=33.94 Aligned_cols=30 Identities=10% Similarity=0.091 Sum_probs=23.8
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i 36 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDIRNYL 36 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred EEecCCEEEeeCCCcEEEEEEecccCCceE
Confidence 444455677789999999999999998754
No 337
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=93.41 E-value=0.066 Score=33.32 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=25.1
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.-+|.|++..+. ...+|..++|.|.+.+.|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~ 33 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQGTLEAQ 33 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEECCTTCC
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeCCCCCc
Confidence 457889887664 5678999999999988765
No 338
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=93.27 E-value=0.12 Score=32.29 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=26.2
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 56 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAV 56 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCE
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceE
Confidence 355666666788899999999999999877654
No 339
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=93.26 E-value=0.12 Score=31.06 Aligned_cols=29 Identities=7% Similarity=0.027 Sum_probs=22.0
Q ss_pred EEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (120)
T 1mqk_L 5 TQTPVSLSASVGETVTITCRASENIYSYL 33 (120)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred EecCCeEEEcCCCcEEEEEEeCCCCCceE
Confidence 33345677889999999999998875543
No 340
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=93.21 E-value=0.063 Score=31.55 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=24.1
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
..+|.|++..++ ....|..++|.|.+...|
T Consensus 3 ~~kP~i~~~p~~-~v~~G~~VtL~C~~~~~~ 32 (105)
T 2vsd_A 3 LPQPSLSLHPSQ-GVSLGDTVTLRCHLPRMA 32 (105)
T ss_dssp CCCCEEEEESCS-SCCTTCEEEEEEECCSSC
T ss_pred CCCCEEEeCCCC-CcCcCCCEEEEEEcCCCC
Confidence 357999998777 467899999999987643
No 341
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=93.20 E-value=0.071 Score=33.05 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=23.9
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-+|.|+...+. ....|..++|.|.+.+ |.+
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~ 33 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAR 33 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCC
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCC
Confidence 47889888666 5578999999999988 444
No 342
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=93.20 E-value=0.11 Score=33.50 Aligned_cols=31 Identities=10% Similarity=0.094 Sum_probs=24.6
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNL 33 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCE
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceE
Confidence 4555556677889999999999999886654
No 343
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=93.08 E-value=0.15 Score=29.93 Aligned_cols=25 Identities=8% Similarity=0.304 Sum_probs=20.6
Q ss_pred EEEecceEEeccCCcEEEEEEEeee
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
|+...+.+.+.+|+.++|.|.+.+.
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~ 27 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDH 27 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESC
T ss_pred eEECCCcEEEccCCCEEEEeEECCC
Confidence 4555567888999999999999876
No 344
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=93.04 E-value=0.12 Score=30.19 Aligned_cols=29 Identities=7% Similarity=0.269 Sum_probs=21.9
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|+...+.+.+.+|..++|.|.+...|.+.
T Consensus 7 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~ 35 (111)
T 1i3g_L 7 LTQSHKFMSTSVGDRVSITCKASQDVGTA 35 (111)
T ss_dssp EEESCSEEECCTTCCEEEEEEESSCCTTC
T ss_pred EEEeCCEEEEcCCCCEEEEEEeCCCCCCC
Confidence 44444567789999999999998876443
No 345
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=93.03 E-value=0.046 Score=36.20 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=28.0
Q ss_pred eeEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~P~ 66 (70)
..+.|.|. .+|.|.+..+. +....|..++|.|.+.++|.
T Consensus 134 ~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 179 (279)
T 2wbj_D 134 PGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 179 (279)
T ss_dssp CCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBS
T ss_pred CCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcC
Confidence 44667775 48999876433 23347999999999999844
No 346
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=92.99 E-value=0.13 Score=32.79 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=25.3
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.|..+.+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 33 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTM 33 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSE
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEE
Confidence 4566666788899999999999998887654
No 347
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=92.97 E-value=0.12 Score=32.92 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=24.3
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|..+.+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v 33 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNL 33 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEE
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceE
Confidence 455566788899999999999998887654
No 348
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=92.92 E-value=0.044 Score=32.56 Aligned_cols=26 Identities=15% Similarity=0.265 Sum_probs=21.5
Q ss_pred cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+-+.+.+|+.++|.|.+.+.|.+.|
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p~~~v 33 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRKNSSL 33 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCTTCEE
T ss_pred CccEEEcCCCCEEEEeEEeccCCCEE
Confidence 44566789999999999999988754
No 349
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=92.92 E-value=0.13 Score=37.48 Aligned_cols=49 Identities=14% Similarity=-0.021 Sum_probs=33.1
Q ss_pred hcCcCCCccce-eeeEEEE--e--ecCCeEEEecceEEeccCCcEE-EEEEEeeeCCC
Q psy15736 16 EEEPEKDKEEV-RRRRRRN--Q--KNLPEIEVERSWVHSGEGYEAQ-LVCIVHAEPHA 67 (70)
Q Consensus 16 ~~~~~~~~~pv-s~~I~L~--V--~ypPeI~v~~~~Vha~~G~~a~-L~CiV~A~P~a 67 (70)
-|.+.+.+.+. .+.+.+. + .++|.|.+..+-. .|..++ |.|.+.+++.+
T Consensus 377 ~C~a~n~~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~ 431 (512)
T 1zvo_C 377 TCTLNHPSLPPQRLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPP 431 (512)
T ss_pred EEEEEeCCCCCCceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCC
Confidence 47777665443 4445432 2 5899988764433 799999 99999996554
No 350
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=92.67 E-value=0.13 Score=39.00 Aligned_cols=51 Identities=10% Similarity=0.065 Sum_probs=36.1
Q ss_pred cCcCCCccceeeeEEEEeecCCeEEEecce-EEeccCC-cEEEEEEEeeeCCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQKNLPEIEVERSW-VHSGEGY-EAQLVCIVHAEPHA 67 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~ypPeI~v~~~~-Vha~~G~-~a~L~CiV~A~P~a 67 (70)
|...+......+.+.|+|.-+|.|.+..+- +....|+ .++|.|.+.+++.+
T Consensus 271 C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~ 323 (401)
T 3f8u_B 271 ATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPS 323 (401)
T ss_dssp EEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSS
T ss_pred EEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCC
Confidence 444444444567889999999999987433 3245686 89999999997443
No 351
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=92.44 E-value=0.059 Score=30.46 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=22.0
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|..+...+.+.+|..++|.|.+.+.|.+
T Consensus 8 v~~~~~~v~~~~G~~v~L~C~~~~~~~~ 35 (126)
T 1eaj_A 8 ITTPEEMIEKAKGETAYLPCKFTLSPED 35 (126)
T ss_dssp ESSSEEEEEEETTSCEEECCBEECCTTC
T ss_pred EECCCceEEEEeCCCEEEEEEEecCCCC
Confidence 3334567888999999999999987754
No 352
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=92.33 E-value=0.067 Score=34.68 Aligned_cols=39 Identities=8% Similarity=0.101 Sum_probs=26.1
Q ss_pred eeEEEEeec-------CCeEEEecce-EEeccCCcEEEEEEEeee-CC
Q psy15736 28 RRRRRNQKN-------LPEIEVERSW-VHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 28 ~~I~L~V~y-------pPeI~v~~~~-Vha~~G~~a~L~CiV~A~-P~ 66 (70)
..+.|+|.. +|.+.+-.+. .....|..++|.|.+.++ |.
T Consensus 115 ~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~ 162 (242)
T 1hxm_B 115 PGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPD 162 (242)
T ss_dssp CCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSC
T ss_pred CcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECC
Confidence 467888886 4555443221 123469999999999998 64
No 353
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=92.30 E-value=0.24 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=23.9
Q ss_pred ecCCeEEE-ecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 35 KNLPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 35 ~ypPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.-+|.|.+ ++.. ...|..++|.|.|.++.++.
T Consensus 22 ~~~P~V~v~~~~~--~~~~~~~tL~C~a~gFyP~~ 54 (119)
T 1bii_B 22 QKTPQIQVYSRHP--PENGKPNILNCYVTQFHPPH 54 (119)
T ss_dssp CBCCEEEEEESSC--CCSSSCEEEEEEEEEEBSSC
T ss_pred CcCCEEEEEcCCc--ccCCCCEEEEEEEEeecCCC
Confidence 57899998 4443 35688999999999975543
No 354
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=92.27 E-value=0.18 Score=33.29 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=26.3
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.|..+.+.+...+|..++|.|.+.+.|.+.|
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i 44 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAV 44 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCE
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcE
Confidence 355666666778899999999999999987654
No 355
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=92.26 E-value=0.2 Score=30.03 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=22.7
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
+.|+.+...+.+.+|..++|.|.+...|
T Consensus 2 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~ 29 (126)
T 4ffy_L 2 IVLTQSPASLAVSLGQRATISCRASESV 29 (126)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSCC
T ss_pred CcEEeCCCeEEEeCCCCEEEEEecCCCc
Confidence 4566666678889999999999998876
No 356
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=92.16 E-value=0.062 Score=32.37 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=19.6
Q ss_pred eEEeccCCcEEEEEEEeeeCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.|.+.+|+.++|.|.+.+.|.+.
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~ 30 (218)
T 4frw_A 8 VVTVVLGQDAKLPCFYRGDSGEQ 30 (218)
T ss_dssp EEEEETTSCEEECCEECCCTTCE
T ss_pred eEEEEcCCCEEEEEEEEcCCCCC
Confidence 46668899999999999998764
No 357
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=92.09 E-value=0.059 Score=34.46 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=31.4
Q ss_pred hcCcCCCc--cceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEE---eeeCCCCC
Q psy15736 16 EEEPEKDK--EEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIV---HAEPHADP 69 (70)
Q Consensus 16 ~~~~~~~~--~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV---~A~P~a~V 69 (70)
.|.+.+.. ...+..+.|.|. |. ..+.+....|..++|.|.+ .+.|.+.|
T Consensus 100 ~C~~~~~~~~~~~~~~~~l~V~--~~---~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v 153 (268)
T 3mj6_A 100 TCEIRLKNESMVMKKPVELWVL--PE---EPRDLRVRVGDTTQMRCSIQSTEEKRVTKV 153 (268)
T ss_dssp EEEEEETTCCCEEEEEEEEEEE--CC---CCSEEEEETTCCEEECCBCEESSSSCCCEE
T ss_pred EEEEEecCCcceEEEEEEEEEe--cc---CCCccccccCCcEEEEEEecCCCCCCccce
Confidence 36665433 335566777765 21 1224566789999999999 66677754
No 358
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=92.05 E-value=0.11 Score=31.65 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=23.2
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
..|+++...+.+.+|.+|+|.|.+...+.
T Consensus 6 ~sVt~~~~~v~g~vG~~v~L~C~~~~~~~ 34 (125)
T 4gos_A 6 HSITVTTVASAGNIGEDGILSCTFEPDIK 34 (125)
T ss_dssp CCSCEEEECEEEETTSCEEEEEEECCCSC
T ss_pred eEEEccCceEEEeCCCCEEEEEEEcCCcc
Confidence 34677777888899999999999975443
No 359
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=92.04 E-value=0.061 Score=34.47 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=23.5
Q ss_pred ecCCeEEEecceEE--eccCCcEEEEEEEeeeC
Q psy15736 35 KNLPEIEVERSWVH--SGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 35 ~ypPeI~v~~~~Vh--a~~G~~a~L~CiV~A~P 65 (70)
..+|.|.+..+... ..+|..++|.|.+.+.|
T Consensus 7 ~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~ 39 (218)
T 2rgs_A 7 EGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVS 39 (218)
T ss_dssp --CCEEEEECCCHHHHHCTTSCCEEEEEEEEEC
T ss_pred CCCCEEEEECcCHHHhhccCCCeeEEEEEcCCc
Confidence 45778877766555 57899999999999984
No 360
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=91.98 E-value=0.21 Score=31.79 Aligned_cols=27 Identities=11% Similarity=0.084 Sum_probs=21.3
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
+.|..+.+ +.+.+|..++|.|.+.+.|
T Consensus 4 ~~v~~p~~-~~v~~G~~v~L~C~~~g~p 30 (247)
T 2ghw_B 4 VQLVQSGG-GVVQPGKSLRLSCAASGFA 30 (247)
T ss_dssp CEEEEECC-EEECTTCCEEEEEEEESSC
T ss_pred eEEEecCC-EEEecCCcEEEEEEecccc
Confidence 44555544 6678999999999999987
No 361
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=91.95 E-value=0.14 Score=31.80 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=23.1
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
-+|.|++..+. ...+|..++|.|.+.+.|
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~ 31 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNYGA 31 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTC
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCCCC
Confidence 47899988766 567899999999986543
No 362
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=91.90 E-value=0.096 Score=34.05 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=27.2
Q ss_pred eeEEEEee------cCCeEEEecce-EEeccCCcEEEEEEEee-eCCC
Q psy15736 28 RRRRRNQK------NLPEIEVERSW-VHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 28 ~~I~L~V~------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A-~P~a 67 (70)
....|.|. .+|.|.+..+. .....|..++|.|.+.+ .|.+
T Consensus 108 ~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 155 (253)
T 3to4_D 108 EGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (253)
T ss_dssp CCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred CCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCc
Confidence 44566665 78888875432 22235789999999999 4554
No 363
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=91.87 E-value=0.38 Score=31.41 Aligned_cols=39 Identities=18% Similarity=0.064 Sum_probs=25.1
Q ss_pred eeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|.| ..+|.|.+..+......|..++|.|.+.++++
T Consensus 141 ~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p 183 (256)
T 3sob_H 141 QGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 183 (256)
T ss_dssp CCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBS
T ss_pred CCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEEC
Confidence 3445666 47888886555444567999999999999543
No 364
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=91.81 E-value=0.11 Score=30.35 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=20.8
Q ss_pred EEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|..+.+.+.+.+|..++|.|.+.+. |..
T Consensus 10 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~ 38 (120)
T 2yz1_A 10 VTQPEKSVSVAAGDSTVLNCTLTSLLPVG 38 (120)
T ss_dssp EECCSSEEEECTTCCEEECCEESCCCSCC
T ss_pred EECCCceEEEeCCCCEEEEeEECCCCCCc
Confidence 3344456778899999999999875 443
No 365
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=91.76 E-value=0.21 Score=37.19 Aligned_cols=44 Identities=7% Similarity=0.097 Sum_probs=30.4
Q ss_pred cceeeeEEEE--eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 24 EEVRRRRRRN--QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 24 ~pvs~~I~L~--V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.+..+.+.+. +.++|.|.+-.+......|..++|.|.|.++..+
T Consensus 434 ~~~~~~~~~~~~~~~~P~V~~~~~~~~~~~~~~~~L~C~v~gfyP~ 479 (551)
T 1ntl_A 434 APIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPE 479 (551)
T ss_pred CCeEEEEecCCCCCcCCceEEeCCChhhccCCceEEEEEEEEeECC
Confidence 3555565554 4599998876444334569999999999994433
No 366
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=91.75 E-value=0.1 Score=34.00 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=25.2
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v 35 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKYSYSATPYL 35 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEEECSSCCEE
T ss_pred cEEEecCceEEecCCCeEEEEEEeCCCCCceE
Confidence 45555556777889999999999998887654
No 367
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=91.71 E-value=0.096 Score=32.27 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=21.3
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|..+...+.+.+|..+.|.|.+.+.|.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~ 31 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRREC 31 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC-
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCC
Confidence 444555677889999999999999885
No 368
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=91.68 E-value=0.09 Score=33.12 Aligned_cols=33 Identities=12% Similarity=0.185 Sum_probs=19.8
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.|....+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v 55 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDM 55 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCE
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeE
Confidence 466666556677789999999999999886654
No 369
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=91.61 E-value=0.081 Score=33.16 Aligned_cols=26 Identities=8% Similarity=0.210 Sum_probs=22.0
Q ss_pred cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.+...+|..++|.|.+.+.|.+.|
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v 47 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSI 47 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCcee
Confidence 34677789999999999999998754
No 370
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=91.59 E-value=0.11 Score=32.85 Aligned_cols=29 Identities=10% Similarity=0.072 Sum_probs=22.6
Q ss_pred CCeEEEecceEEe--ccCCcEEEEEEEeeeC
Q psy15736 37 LPEIEVERSWVHS--GEGYEAQLVCIVHAEP 65 (70)
Q Consensus 37 pPeI~v~~~~Vha--~~G~~a~L~CiV~A~P 65 (70)
+|.|.+..+.... .+|..++|.|.+.+.|
T Consensus 1 ~P~v~~~pps~~~~~~~G~~v~L~C~~~g~~ 31 (207)
T 1l6x_A 1 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVS 31 (207)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEEC
T ss_pred CCeEEEeCcChHHheecCCceEEEEEEeccc
Confidence 4667776555555 5899999999999986
No 371
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=91.52 E-value=0.12 Score=32.41 Aligned_cols=29 Identities=14% Similarity=0.094 Sum_probs=22.0
Q ss_pred EEecceEEeccCCcEEEEEEEee---eCCCCC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHA---EPHADP 69 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A---~P~a~V 69 (70)
..+.+.+.+.+|..++|.|.+.+ .|.+.|
T Consensus 6 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v 37 (250)
T 2fbo_J 6 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVI 37 (250)
T ss_dssp ECSCSEEEECTTSCEEECCEEEECSCCSCCEE
T ss_pred EcCCCceEEecCCeEEEEEEeEcCCCCCceEE
Confidence 34445677889999999999998 666543
No 372
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=91.48 E-value=0.21 Score=31.02 Aligned_cols=25 Identities=8% Similarity=0.118 Sum_probs=20.4
Q ss_pred ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v 32 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRM 32 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCE
Confidence 3456688999999999999987654
No 373
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=91.39 E-value=0.34 Score=28.89 Aligned_cols=30 Identities=20% Similarity=0.293 Sum_probs=21.6
Q ss_pred CCeEEE-ecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 37 LPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 37 pPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
||.|.+ +++-. ..|+.++|.|.|.++..+.
T Consensus 4 ~P~V~v~~~~~~--~~~~~~~L~C~~~gFyP~~ 34 (99)
T 3p73_B 4 TPKVQVYSRFPA--SAGTKNVLNCFAAGFHPPK 34 (99)
T ss_dssp CCEEEEEESSCC--CTTSCEEEEEEEEEESSSC
T ss_pred CCEEEEEeCCcc--cCCCCEEEEEEEeeeECCC
Confidence 788888 33322 3588999999999975543
No 374
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=91.38 E-value=0.039 Score=37.01 Aligned_cols=52 Identities=6% Similarity=-0.018 Sum_probs=34.8
Q ss_pred hcCcCCCccceeeeEEE---EeecCCeEEEecc-eEEeccCCcEEEEEEEeeeC-CC
Q psy15736 16 EEEPEKDKEEVRRRRRR---NQKNLPEIEVERS-WVHSGEGYEAQLVCIVHAEP-HA 67 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L---~V~ypPeI~v~~~-~Vha~~G~~a~L~CiV~A~P-~a 67 (70)
.|.+.+.+....+.+.+ .+..+|.|.+..+ .+...+|..++|.|.+.+.| .+
T Consensus 88 ~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p 144 (323)
T 2wqr_A 88 TCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSK 144 (323)
T ss_dssp EEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCS
T ss_pred EEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCC
Confidence 48888777666655543 2345677766533 33456899999999999974 44
No 375
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=91.35 E-value=0.33 Score=29.26 Aligned_cols=27 Identities=22% Similarity=0.335 Sum_probs=21.6
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|.++.+.+...+|..++|.|.+.+.|.
T Consensus 5 ~~~~~~~~~v~~G~~v~L~C~~~~~p~ 31 (189)
T 2v44_A 5 VTISLSKVELSVGESKFFTCTAIGEPE 31 (189)
T ss_dssp EEESCSEEEEETTCCEEEEEEEEECCS
T ss_pred EEecCCceEEecCCcEEEEEEeecCCe
Confidence 344455667789999999999999886
No 376
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.24 E-value=0.28 Score=30.21 Aligned_cols=28 Identities=11% Similarity=-0.044 Sum_probs=21.8
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|.|..+-+-+...+|+++.|.|.|.+.|
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs~~p 36 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLSTII 36 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEESSCC
T ss_pred cEEecCCCCeEEcCCCcEEEEEEECCCC
Confidence 4455555567889999999999999833
No 377
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=91.22 E-value=0.3 Score=28.79 Aligned_cols=26 Identities=12% Similarity=0.293 Sum_probs=20.5
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|....+.+.+.+|+.++|.|.+.+.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~~ 28 (113)
T 1sq2_N 3 VDQTPRSVTKETGESLTINCVLRDAS 28 (113)
T ss_dssp EEEECSEEEECTTCCEEEEEEECSCS
T ss_pred eEeCCccEEEecCCCEEEEEEECCCc
Confidence 34445567778999999999998776
No 378
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=91.04 E-value=0.098 Score=37.16 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=28.2
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
++|.|....+.+...+|..++|.|.+ +.|.+.|
T Consensus 340 ~~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i 372 (440)
T 3zyj_A 340 YAPVIVEPPADLNVTEGMAAELKCRA-STSLTSV 372 (440)
T ss_dssp CCCCEEECCCCEEECTTSCCEECCEE-SSTTSEE
T ss_pred CCCcccccccceeeccCceEEEEeec-CCCCCce
Confidence 47999988888999999999999999 5687754
No 379
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=90.99 E-value=0.094 Score=34.06 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=24.9
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
+..+|.|++..+. ...+|..++|.|.+.+ |.+
T Consensus 6 ~~~~P~i~~~p~~-~v~~G~~vtL~C~~~~-~~~ 37 (218)
T 1uct_A 6 DFPMPFISAKSSP-VIPLDGSVKIQCQAIR-EAY 37 (218)
T ss_dssp GSCCCCEEESSCS-EEETTCCEEEEECCCT-TCS
T ss_pred CCCCCEEEecCCC-ccCCCCCEEEEEEcCC-CCC
Confidence 4668999987664 4578999999999876 443
No 380
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=90.97 E-value=0.31 Score=32.41 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=28.1
Q ss_pred eeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 26 VRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 26 vs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.+..+.|.|.. +|.|.+..+. ....|..++|.|.+.+.|
T Consensus 88 ~S~~~~L~V~~~~~~P~i~~~p~~-~v~~G~~vtL~C~~~~~~ 129 (242)
T 1p6f_A 88 PSNLLDLVVTEMYDTPTLSVHPGP-EVISGEKVTFYCRLDTAT 129 (242)
T ss_dssp CCCCEEEEEECCSCCCEEEEESCS-EEETTCEEEEEEECTTSC
T ss_pred CCcceEEEeecccCCCceEccCCC-ccCCCCcEEEEEecCCCC
Confidence 35567777763 7899876543 346799999999987654
No 381
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=90.86 E-value=0.1 Score=33.22 Aligned_cols=25 Identities=16% Similarity=0.073 Sum_probs=20.3
Q ss_pred ceEEeccCCcEEEEEEEeee---CCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAE---PHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~---P~a~V 69 (70)
+.+...+|+.++|.|.|.+. |.+.|
T Consensus 15 ~~v~V~eG~~v~L~C~v~g~~~~p~P~V 42 (126)
T 2dav_A 15 QGGTVKVGEDITFIAKVKAEDLLRKPTI 42 (126)
T ss_dssp CCCEEETTCCEEEEEEEECCCSSSCCEE
T ss_pred CCeEEeCCCCEEEEEEEeccCCCCCCcE
Confidence 45566889999999999985 77765
No 382
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=90.85 E-value=0.21 Score=31.49 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=21.7
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|....+.+.+.+|..++|.|.+.+.|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~ 29 (240)
T 1moe_A 3 VLTQSPASLAVSLGQRATMSCRAGESV 29 (240)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCC
T ss_pred ceEeeCCeEEecCCCCEEEEEeCCCcc
Confidence 344555567778999999999999988
No 383
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=90.82 E-value=0.15 Score=31.45 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=21.0
Q ss_pred EecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 42 VERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 42 v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.+...|.+.+|..+.|.|.+.+.|..
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~ 31 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQL 31 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSC
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCC
Confidence 34556778899999999999988854
No 384
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=90.79 E-value=0.31 Score=31.38 Aligned_cols=29 Identities=10% Similarity=-0.015 Sum_probs=24.5
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.|....+.+.+.+|..++|.|.+.+.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 62 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSI 62 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCC
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCc
Confidence 56677766778889999999999999887
No 385
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=90.73 E-value=0.28 Score=29.24 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=19.1
Q ss_pred ecceEEeccCCcEEEEEEEeeeCC
Q psy15736 43 ERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 43 ~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+...+.+.+|..++|.|.+.+.|.
T Consensus 12 ~~~~v~~~~G~~v~L~C~~~~~~~ 35 (139)
T 1pko_A 12 PGHPIRALVGDEAELPCRISPGKN 35 (139)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCC
T ss_pred CCCCEEEEeCCCEEEeeEccCCCC
Confidence 344577889999999999987653
No 386
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=90.62 E-value=0.062 Score=38.16 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=24.7
Q ss_pred CeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 38 PEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 38 PeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|.|... .+.+.+..|..++|.|.+.+.|.|.|
T Consensus 385 P~i~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i 417 (477)
T 2id5_A 385 ARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAI 417 (477)
T ss_dssp EEESCCSCEEEEEETTCCEEECCCEEEESCCEE
T ss_pred ccccccccccEEEeCCCeEEEEEeccccCCCEE
Confidence 444333 35677789999999999999999865
No 387
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=90.55 E-value=0.45 Score=31.85 Aligned_cols=39 Identities=13% Similarity=0.006 Sum_probs=25.0
Q ss_pred eeEEEEe----ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 28 RRRRRNQ----KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 28 ~~I~L~V----~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
....|+| ..+|.|.+..+......|..++|.|.+.+++.
T Consensus 114 ~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P 156 (263)
T 3iu4_H 114 QGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFP 156 (263)
T ss_dssp CCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBS
T ss_pred CceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeC
Confidence 4456777 46888886544444457999999999999764
No 388
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=90.52 E-value=0.083 Score=32.20 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=21.9
Q ss_pred cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
++.|.+.+|..++|.|.+.+.|.+.|
T Consensus 2 ~~~v~~~~G~~v~L~C~~~~~~~~~i 27 (184)
T 2ny1_B 2 KKVVLGKKGDTVELTCTASQKKSIQF 27 (184)
T ss_dssp CCEEEEETTSCEEECCBCSSSSCCCE
T ss_pred CCcEEEeCCCCEEEEEEEcCCCceEE
Confidence 35678899999999999998887764
No 389
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=90.47 E-value=0.3 Score=31.55 Aligned_cols=28 Identities=11% Similarity=0.025 Sum_probs=23.1
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeee
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
+|.+......+.+.+|..++|.|.+.+.
T Consensus 6 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~ 33 (256)
T 3juy_B 6 HQVQLVQSGAEVKKPGASVKVSCQASGY 33 (256)
T ss_dssp -CCEEEECCCEEECTTCCEEEEEEEESS
T ss_pred ceEEEEecCCceecCCCeEEEEEEeecc
Confidence 5666777778888999999999999883
No 390
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=90.41 E-value=0.37 Score=27.87 Aligned_cols=26 Identities=12% Similarity=0.151 Sum_probs=20.4
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|....+.+.+.+|+.++|.|.+.+.|
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~ 29 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESV 29 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCC
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCc
Confidence 33444567889999999999998876
No 391
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=90.33 E-value=0.21 Score=33.03 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=25.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.+.|..+.+.+.+.+|..++|.|.+.+.|.+.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~ 55 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATT 55 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCe
Confidence 35666666778889999999999998766543
No 392
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=90.25 E-value=0.19 Score=34.05 Aligned_cols=39 Identities=10% Similarity=0.022 Sum_probs=28.5
Q ss_pred eeeeEEEEeec---CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 26 VRRRRRRNQKN---LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 26 vs~~I~L~V~y---pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.+..+.|.|.. +|.|.+.... ....|..++|.|.+.+.|
T Consensus 93 ~S~~~~L~V~~~~~~P~l~~~p~~-~V~~G~~vtL~C~~~~~~ 134 (257)
T 1b6u_A 93 PSDPLDIVITGLYEKPSLSAQPGP-TVLAGESVTLSCSSRSSY 134 (257)
T ss_dssp CCCCEEEEEECSSCCCEEECSSCT-TCBTTCEEEEEEECSSCC
T ss_pred cCCCEEEecccCCCCcceEccCCC-ccCCCCEEEEEEeCCCCC
Confidence 45666777764 5788876542 347899999999998765
No 393
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=90.08 E-value=0.45 Score=27.73 Aligned_cols=26 Identities=12% Similarity=0.118 Sum_probs=20.3
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|....+.+.+.+|..++|.|.+.+.|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~ 29 (114)
T 1eeq_A 4 LTQSPDSLAVSLGERATINCKSSQSV 29 (114)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCC
T ss_pred eEecCCeEEEcCCCeEEEEEEcCCCc
Confidence 33444567788999999999998776
No 394
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=90.05 E-value=0.43 Score=27.62 Aligned_cols=25 Identities=8% Similarity=0.274 Sum_probs=19.7
Q ss_pred EEEecceEEeccCCcEEEEEEEeee
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
|....+.+.+.+|..++|.|.+.+.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~~~~ 27 (108)
T 2coq_A 3 VDQTPRIATKETGESLTINCVLRDT 27 (108)
T ss_dssp EEEECSEEEECTTCCEEEEEEECCS
T ss_pred eEeCCceEEEcCCCCEEEEeEeCCC
Confidence 4444556778899999999999865
No 395
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.96 E-value=0.091 Score=29.61 Aligned_cols=24 Identities=25% Similarity=0.370 Sum_probs=19.5
Q ss_pred ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+-+.+.+|..++|.|.+. .|.+.|
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v 42 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEV 42 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCC
T ss_pred ccEEEeCCCcEEEEEEec-CCCCce
Confidence 345678899999999998 887765
No 396
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=89.92 E-value=0.46 Score=30.19 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=23.5
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.+.|+.+.+.+.+.+|..++|.|.+...+..
T Consensus 16 ~~~v~q~p~~v~v~~G~sVtL~C~~s~~~~~ 46 (146)
T 2yc1_B 16 EIVLTQSPATLSVSPGERATLSCRASQSVRS 46 (146)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTT
T ss_pred cceEEEeCCEEEEecCCCEEEEEEECCCCCC
Confidence 3455555566778899999999999887644
No 397
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=89.76 E-value=0.45 Score=27.57 Aligned_cols=25 Identities=24% Similarity=0.250 Sum_probs=19.2
Q ss_pred EEecceEEeccCCcEEEEEEEeeeC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
....+.+.+.+|+.++|.|.+.+.+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~ 29 (113)
T 1h5b_A 5 EQSPSALSLHEGTDSALRCNFTTTM 29 (113)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCC
T ss_pred EECCCEEEEecCCcEEEEEEECCCC
Confidence 3344566778999999999998754
No 398
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=89.71 E-value=0.32 Score=30.31 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=23.0
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
+.-+|.|++..+ ....+|..++|.|.+.. |.+
T Consensus 5 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~ 36 (201)
T 1nkr_A 5 VHRKPSLLAHPG-PLVKSEETVILQCWSDV-MFE 36 (201)
T ss_dssp --CCCEEEEESC-SEEETTCCEEEEEEESS-CCS
T ss_pred cCCCCeEEEEcC-CccCCCCcEEEEEeccC-CCC
Confidence 456788988766 44578999999999874 443
No 399
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=89.64 E-value=0.41 Score=30.50 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=21.1
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|....+.+.+.+|..++|.|.+.+.|
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~ 29 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTI 29 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcc
Confidence 44444567778999999999999888
No 400
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=89.63 E-value=0.23 Score=31.63 Aligned_cols=23 Identities=4% Similarity=0.014 Sum_probs=19.1
Q ss_pred eEEeccCCcEEEEEEEeeeCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.+.+.+|..++|.|.+.+.|.+.
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p~~~ 34 (248)
T 3pv7_A 12 TQITPLNDNVTIFCNIFYSQPLN 34 (248)
T ss_dssp EEEEETTSCEEECCEEEESSCCC
T ss_pred CeEEeCCCCEEEeeEEecCCCcC
Confidence 44567899999999999988764
No 401
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=89.60 E-value=0.6 Score=28.64 Aligned_cols=29 Identities=24% Similarity=0.361 Sum_probs=23.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
++.|+.....+.+.+|+.++|.|.+.+.+
T Consensus 4 ~~~v~Q~p~~~~v~~G~~vtL~C~~s~~~ 32 (128)
T 1nez_G 4 APELRIFPKKMDAELGQKVDLVCEVLGSV 32 (128)
T ss_dssp CCEEEEESSCEEECTTCCEEEEEEEESCC
T ss_pred CCeeEECCCeEEEcCCCCEEEEEEeCccC
Confidence 56777766667788999999999997654
No 402
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.59 E-value=0.12 Score=32.55 Aligned_cols=25 Identities=20% Similarity=0.190 Sum_probs=20.1
Q ss_pred ceEEeccCCcEEEEEEEeee---CCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAE---PHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~---P~a~V 69 (70)
+.|...+|..|+|.|.|.+. |.|.|
T Consensus 20 ~~v~V~eG~~v~L~C~v~g~~~~p~P~V 47 (118)
T 2edn_A 20 DSVSVETGKDAVVVAKVNGKELPDKPTI 47 (118)
T ss_dssp CCCEEETTSCEECCEEEETTTSSSCCCC
T ss_pred CCeEEeCCCCEEEEEEEeccCCCCCCcE
Confidence 44556789999999999985 77776
No 403
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=89.47 E-value=0.57 Score=29.21 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=25.1
Q ss_pred EeecCCeEEE-ecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 33 NQKNLPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 33 ~V~ypPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
...-||.|.+ +++-. ..|+.++|.|.+.++..+.|
T Consensus 20 ~~~~~P~V~v~~~~~~--~~g~~~~L~C~v~gFyP~~I 55 (119)
T 3o81_A 20 QADLTPKVQVYSRFPA--SAGTKNVLNCFAAGFHPPKI 55 (119)
T ss_dssp -CCCSCEEEEEESSCC--CTTSCEEEEEEEEEESSSCC
T ss_pred CCccCCceEEEcCCcc--cCCCcEEEEEEEecccCCCc
Confidence 4557999998 34332 35889999999999866543
No 404
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=89.47 E-value=0.14 Score=33.09 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=26.3
Q ss_pred eeEEEEee---------cCCeEEEecce-EEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQK---------NLPEIEVERSW-VHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~---------ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~-P~a 67 (70)
..+.|+|. .||.+.+-.+. .....|..++|.|.+.++ |.+
T Consensus 111 ~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~ 161 (230)
T 1ypz_F 111 EGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDV 161 (230)
T ss_dssp SCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCC
T ss_pred CCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCC
Confidence 56788886 45655443221 112358999999999988 763
No 405
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=89.44 E-value=0.36 Score=30.37 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=22.0
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|....+.+.+.+|..++|.|. .+.|.+.|
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i 31 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNM 31 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEE
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccE
Confidence 455556677889999999999 67776643
No 406
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=89.40 E-value=0.23 Score=29.73 Aligned_cols=24 Identities=25% Similarity=0.331 Sum_probs=19.0
Q ss_pred ceEEeccCCcEEEEEEEeee-CCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAE-PHAD 68 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~-P~a~ 68 (70)
+.+.+.+|..++|.|.+.+. |.+.
T Consensus 11 ~~~~v~~G~~vtL~C~~~~~~~~~~ 35 (127)
T 2jju_A 11 KSVSVAAGESATLRCAMTSLIPVGP 35 (127)
T ss_dssp SEEEEETTSCEEECCEESCCCSCCC
T ss_pred CeEEEeCCCCEEEEEEEeCCCCCCE
Confidence 46778899999999999875 4443
No 407
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=89.28 E-value=0.33 Score=32.02 Aligned_cols=28 Identities=11% Similarity=0.079 Sum_probs=22.6
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
+.|....+.+.+.+|..++|.|.+.+.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~ 33 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTL 33 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCC
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcc
Confidence 4555555677788999999999999887
No 408
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=89.04 E-value=0.17 Score=33.50 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=21.9
Q ss_pred CCeEEEecceEE--eccCCcEEEEEEEeee---CCC
Q psy15736 37 LPEIEVERSWVH--SGEGYEAQLVCIVHAE---PHA 67 (70)
Q Consensus 37 pPeI~v~~~~Vh--a~~G~~a~L~CiV~A~---P~a 67 (70)
+|.|.+..+.+. ..+|..++|.|.+.+. |.+
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~ 50 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPE 50 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCC
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCC
Confidence 555555544444 4689999999999988 765
No 409
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=88.99 E-value=0.72 Score=28.75 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=24.3
Q ss_pred eecCCeEEE-ecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 34 QKNLPEIEV-ERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 34 V~ypPeI~v-~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
..-||.|.+ +++- ...|+.++|.|.+.++..+.
T Consensus 21 ~~~~P~V~v~~~~~--~~~g~~~~L~C~~~gFyP~~ 54 (119)
T 3jts_B 21 IQRTPKIQVYSRHP--AENGKSNFLNCYVSGFHPSD 54 (119)
T ss_dssp CCBCCEEEEEESSC--CCTTSCEEEEEEEEEEBSSC
T ss_pred CccCCEEEEEccCc--ccCCCcEEEEEEEeCccCCC
Confidence 456999999 4432 24688999999999975553
No 410
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=88.94 E-value=0.14 Score=31.06 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=21.4
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
|..+.+.+.+.+|..++|.|.+.+.|..
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~ 30 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPED 30 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTC
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCC
Confidence 4455677888999999999999998843
No 411
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=88.85 E-value=0.54 Score=30.32 Aligned_cols=26 Identities=19% Similarity=0.206 Sum_probs=20.8
Q ss_pred eEEEecceEEeccCCcEEEEEEEeee
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.+....+.+.+.+|..++|.|.+.+.
T Consensus 3 ~v~q~p~~v~~~~G~~v~L~C~~~~~ 28 (242)
T 1hxm_B 3 HLEQPQISSTKTLSKTARLECVVSGI 28 (242)
T ss_dssp EEECCCSEEEEETTCCEEEEEEEESS
T ss_pred ccCcCCceEEecCCCcEEEEEEeCCc
Confidence 44555567888999999999999875
No 412
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=88.78 E-value=0.15 Score=32.21 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=22.2
Q ss_pred cCCeEEEecceEEeccC--CcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEG--YEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G--~~a~L~CiV~A~P~a~V 69 (70)
|.|......+.|...+| ..+.|.|.+.+ |.+.|
T Consensus 6 f~~~~~~~p~~v~v~eG~~~~v~L~C~~~~-p~~~v 40 (213)
T 2x1w_L 6 FIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNV 40 (213)
T ss_dssp BCCC----CEEEEECCSTTCEEEECCCBSS-TTCCE
T ss_pred ccccCcCCceEEEEecCCCccEEEeeccCC-CCcEE
Confidence 44444444467888899 99999999986 76654
No 413
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=88.73 E-value=0.3 Score=27.43 Aligned_cols=21 Identities=19% Similarity=0.226 Sum_probs=16.1
Q ss_pred EEeccCCcEEEEEEEe-eeCCC
Q psy15736 47 VHSGEGYEAQLVCIVH-AEPHA 67 (70)
Q Consensus 47 Vha~~G~~a~L~CiV~-A~P~a 67 (70)
+.+.+|..++|.|.+. ..|.+
T Consensus 10 v~~~~G~~v~L~C~~~~~~~~~ 31 (118)
T 3udw_C 10 VPGFLGDSVTLPCYLQVPNMEV 31 (118)
T ss_dssp EEEETTSCEEECCEEECCTTCC
T ss_pred EEEeeCCcEEEEEEeECCCCCC
Confidence 6667899999999994 44443
No 414
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=88.55 E-value=0.44 Score=31.13 Aligned_cols=30 Identities=10% Similarity=0.008 Sum_probs=24.8
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
-.+.|....+.+.+.+|..++|.|.+.+.|
T Consensus 14 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 43 (268)
T 1x9q_A 14 SDVVMTQTPLSLPVSLGDQASISCRSSQSL 43 (268)
T ss_dssp CCCCEEEECSEECCCTTCCEEEEEEESSCC
T ss_pred ccceEEeeCCeEEecCCCCEEEEeEecCCc
Confidence 356677766778889999999999999887
No 415
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=88.52 E-value=0.65 Score=28.70 Aligned_cols=26 Identities=8% Similarity=0.188 Sum_probs=21.5
Q ss_pred eEEEecceEEeccCCcEEEEEEEeee
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.|+.+...+...+|+.++|.|.+...
T Consensus 2 ~V~Q~p~~v~v~~G~svtL~C~~s~~ 27 (126)
T 3moq_A 2 WVDQTPRTATKETGESLTINCVLRDA 27 (126)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESC
T ss_pred ceEECCceEEEeCCCCEEEEEEeecC
Confidence 46666677888999999999999865
No 416
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=88.48 E-value=0.2 Score=30.59 Aligned_cols=29 Identities=10% Similarity=-0.084 Sum_probs=21.1
Q ss_pred EEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
++...-+.+.+|..++|.|.+.+.|.+.|
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~~~~~~~~v 31 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHNLPLALGAF 31 (208)
T ss_dssp EEEEESSEEETTCCEEEEEECCCSSCSEE
T ss_pred cccCccceeecCCcEEEEEeCCCCCceEE
Confidence 34444466778999999999877776543
No 417
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=88.33 E-value=0.26 Score=30.51 Aligned_cols=27 Identities=7% Similarity=0.065 Sum_probs=19.7
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|..+. .+.+.+|..++|.|.+. |.+.|
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~--~~~~v 30 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT--SNNFV 30 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC--CSSCE
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC--CCCeE
Confidence 44444 56778899999999998 65543
No 418
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=88.25 E-value=0.5 Score=32.34 Aligned_cols=50 Identities=12% Similarity=0.134 Sum_probs=35.0
Q ss_pred cCcCCCccceeeeEEEEeecCCe---EEEecceEEeccCCcEEEEEEEee-eCCCC
Q psy15736 17 EEPEKDKEEVRRRRRRNQKNLPE---IEVERSWVHSGEGYEAQLVCIVHA-EPHAD 68 (70)
Q Consensus 17 ~~~~~~~~pvs~~I~L~V~ypPe---I~v~~~~Vha~~G~~a~L~CiV~A-~P~a~ 68 (70)
|-..-.+..-.+.+.|.|-.+|+ |+....| ..+|++.+|.|.|++ +|.+.
T Consensus 67 C~~~c~~~~~~~~~~itVy~~P~~v~i~~~p~~--~~~G~~~tL~C~v~~v~P~~~ 120 (192)
T 1zxq_A 67 CHFTCSGKQESMNSNVSVYQPPRQVILTLQPTL--VAVGKSFTIECRVPTVEPLDS 120 (192)
T ss_dssp EEEEETTEEEEEEEEEEECBCCCCCEEEEESSE--ECTTSEEEEEEEECSCBCGGG
T ss_pred EEEECCCcceEEEEEEEEEeCCCCceEccCCcc--ccCCCcEEEEEEeCCeECCCC
Confidence 33444455667899999998884 3332345 467999999999995 77654
No 419
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=88.22 E-value=0.34 Score=28.34 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.1
Q ss_pred ecceEEeccCCcEEEEEEEee
Q psy15736 43 ERSWVHSGEGYEAQLVCIVHA 63 (70)
Q Consensus 43 ~~~~Vha~~G~~a~L~CiV~A 63 (70)
+.+.+.+.+|..++|.|.+..
T Consensus 10 ~~~~v~v~~G~~v~L~C~~~~ 30 (135)
T 1xt5_A 10 THTEVEVHAGGTVELPCSYQL 30 (135)
T ss_dssp SCSEEEEETTSCEEECCEEEE
T ss_pred CCceEEEeCCCCEEEeeEeec
Confidence 345677889999999999864
No 420
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=88.14 E-value=0.58 Score=28.90 Aligned_cols=22 Identities=18% Similarity=0.235 Sum_probs=18.3
Q ss_pred ceEEeccCCcEEEEEEEeeeCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+.+.+.+|..++|.|.+.+.|.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~ 29 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAV 29 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCC
T ss_pred CeEeecCCCCEEEEEEeccccc
Confidence 3556688999999999999873
No 421
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=88.06 E-value=0.1 Score=32.67 Aligned_cols=17 Identities=12% Similarity=0.067 Sum_probs=14.2
Q ss_pred ccCCcEEEEEEEeeeCCCCC
Q psy15736 50 GEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 50 ~~G~~a~L~CiV~A~P~a~V 69 (70)
.+|..++|.|.+ |.+.|
T Consensus 120 ~~G~~v~l~C~~---p~p~i 136 (186)
T 1jbj_A 120 RGDGSVLLTCGL---TDKTI 136 (186)
T ss_dssp SSSCEEEEECSS---SCSCE
T ss_pred CCCCeEEEEeeC---CCCeE
Confidence 489999999998 77654
No 422
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=88.05 E-value=0.43 Score=30.24 Aligned_cols=30 Identities=20% Similarity=0.132 Sum_probs=22.6
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
+.|..+.+.+.+.+|+.++|.| ..+.|.+.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~ 32 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLY 32 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCE
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCE
Confidence 4566666778889999999999 55666544
No 423
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=87.88 E-value=0.72 Score=26.75 Aligned_cols=25 Identities=12% Similarity=0.085 Sum_probs=19.5
Q ss_pred EEecceEEeccCCcEEEEEEEeeeC
Q psy15736 41 EVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 41 ~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
....+.+.+.+|..++|.|.+...+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~ 29 (113)
T 1dlf_L 5 TQTPLSLPVSLGNQASISCRSSQSL 29 (113)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCC
T ss_pred EEeCCEEEEcCCCCEEEEEEccccc
Confidence 3333467788999999999998766
No 424
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.86 E-value=0.41 Score=28.67 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=17.4
Q ss_pred cceEEeccCCcEEEEEEEeee
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~ 64 (70)
...+.+.+|+.++|.|.+...
T Consensus 15 p~~~~v~~G~~v~L~C~~~~~ 35 (136)
T 2d9c_A 15 EKSVSVAAGESATLRCAMTSL 35 (136)
T ss_dssp CSEEEEETTSCEEECCEESCC
T ss_pred CcEEEEcCCCCEEEEEEEcCC
Confidence 345777889999999999875
No 425
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=87.77 E-value=0.38 Score=28.32 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=20.7
Q ss_pred ecCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 35 KNLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 35 ~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
.-+|.|++..+.+ ...|..++|.|.+...|.
T Consensus 6 ~~kP~l~~~p~~~-v~~G~~VtL~C~~~~~~~ 36 (108)
T 4hwn_A 6 FPAPILRAVPSAE-PQAGSPMTLSCQTKLPLQ 36 (108)
T ss_dssp CCCCEEEEESCSS-CBTTCCEEEEEEC-----
T ss_pred CCCCEEEecCCCc-CCCCCcEEEEEcccCCCC
Confidence 3468998887653 357999999999987654
No 426
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=87.53 E-value=2.5 Score=25.25 Aligned_cols=52 Identities=21% Similarity=0.090 Sum_probs=38.0
Q ss_pred cCcCCC-ccceeeeEEEEeecCCeEEEecceEEeccCCcEEEEEEEee-eCCCC
Q psy15736 17 EEPEKD-KEEVRRRRRRNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHAD 68 (70)
Q Consensus 17 ~~~~~~-~~pvs~~I~L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~ 68 (70)
|.+.+. +........+.+..+|.+....+......|..+.|.|.+.+ .|.+.
T Consensus 100 C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~ 153 (225)
T 4fmk_A 100 CEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPAR 153 (225)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCE
T ss_pred EEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCE
Confidence 555443 44566677889999999998888888888888888877655 55543
No 427
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=87.38 E-value=0.41 Score=30.36 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=21.2
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeCCC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|..+.+.+.+.+|..++|.|.+.+ |.+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~ 31 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPIS-GHS 31 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCT-TCC
T ss_pred ccccCcceeeecCCCcEEEEEEeCC-CCc
Confidence 4555556778889999999999875 444
No 428
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=87.31 E-value=0.72 Score=29.69 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=19.1
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|..+.+ +.+.+|..++|.|.+.+.|
T Consensus 5 ~v~~~~~-~~v~~G~~v~L~C~~~~~~ 30 (256)
T 3umt_A 5 QLQQSGL-ELVKPGASVKISCKTSGYT 30 (256)
T ss_dssp EEEECCC-EEECTTCCEEEEEEEESSC
T ss_pred eEEccCc-eEEcCCCCEEEEEEEeccc
Confidence 3444433 4478899999999999865
No 429
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=87.10 E-value=0.89 Score=29.44 Aligned_cols=25 Identities=12% Similarity=0.025 Sum_probs=19.3
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|..+.+ +.+.+|..++|.|.+.+.|
T Consensus 4 ~~~p~~-~~v~~G~~v~L~C~~~g~p 28 (257)
T 1f3r_B 4 LLESGP-GLVRPSETLSLTCTVSGFS 28 (257)
T ss_dssp EEEECC-SEECTTSEEEEEEEEESSC
T ss_pred EECCCC-ccccCCceEEEEEEEeccc
Confidence 444444 4578899999999999886
No 430
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=87.03 E-value=0.31 Score=28.96 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=18.2
Q ss_pred eEEeccCCcEEEEEEEeeeCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+|..|+|.|.+.+.|..
T Consensus 9 ~vtv~~G~~v~L~C~~~~~~~~ 30 (123)
T 4gjt_B 9 VVTVVLGQDAKLPCFYRGDSGE 30 (123)
T ss_dssp EEECCTTSEEEECCEECCCTTC
T ss_pred EEEEEcCCCEEEEEEEeCCccC
Confidence 4667889999999999877654
No 431
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=86.97 E-value=0.14 Score=33.34 Aligned_cols=24 Identities=21% Similarity=0.137 Sum_probs=19.6
Q ss_pred eEEeccCCcEEEEEE---EeeeCCCCC
Q psy15736 46 WVHSGEGYEAQLVCI---VHAEPHADP 69 (70)
Q Consensus 46 ~Vha~~G~~a~L~Ci---V~A~P~a~V 69 (70)
-|.+.+|.+++|.|. |.+.|.+.|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V 28 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEV 28 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEE
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEE
Confidence 477899999999995 677787765
No 432
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=86.91 E-value=0.57 Score=31.12 Aligned_cols=29 Identities=14% Similarity=0.103 Sum_probs=23.9
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEee
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHA 63 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A 63 (70)
+.-+|.|++..++ ....|..++|.|.+..
T Consensus 4 ~~~kP~i~~~P~~-~v~~G~~VtL~C~~~~ 32 (242)
T 1p6f_A 4 TLPKPFIWAEPHF-MVPKEKQVTICCQGNY 32 (242)
T ss_dssp CCCCCEEEEESCS-EEETTCCEEEEEECCT
T ss_pred CCCCCEEEeeCCC-ccCCCCcEEEEEeeCC
Confidence 3568999998877 5678999999999864
No 433
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=86.80 E-value=0.55 Score=31.94 Aligned_cols=22 Identities=27% Similarity=0.277 Sum_probs=18.6
Q ss_pred ceEEeccCCcEEEEEEEeeeCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
+.|.+..|..++|.|.+ +.|.+
T Consensus 15 ~~v~v~~G~sv~L~C~a-~~p~P 36 (210)
T 1gsm_A 15 PVVAVALGASRQLTCRL-ACADR 36 (210)
T ss_dssp SEEEEETTCCEEEEEEE-CCSST
T ss_pred CceEEeCCCCEEEEEEC-CCCCC
Confidence 44667789999999999 88877
No 434
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=86.78 E-value=0.8 Score=27.14 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=21.1
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
-||.|.+-.+- ....|+.++|.|.|.++-.
T Consensus 3 ~~P~V~v~~~~-~~~~~~~~~L~C~~~gFyP 32 (97)
T 3gbl_A 3 SSPKIQVYSHY-PGEYGKENTLICYVSGFHP 32 (97)
T ss_dssp BCCEEEEEESS-CCCTTCCEEEEEEEECCBS
T ss_pred CCCEEEEEcCC-cccCCCcEEEEEEEcceeC
Confidence 47888885331 1235889999999999733
No 435
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=86.76 E-value=0.41 Score=27.80 Aligned_cols=24 Identities=17% Similarity=-0.000 Sum_probs=18.7
Q ss_pred cceEEeccCCcEEEEEEEeeeCCC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P~a 67 (70)
...+.+.+|..++|.|.+...+..
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~ 30 (112)
T 2z35_A 7 GGQVALSEEDFLTIHCNYSASGYP 30 (112)
T ss_dssp CSEEEEETTCCEEECCEEECSSCC
T ss_pred CCcEEEcCCCCEEEEEEECCCCCC
Confidence 445677889999999999876443
No 436
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=86.72 E-value=0.4 Score=30.23 Aligned_cols=28 Identities=7% Similarity=0.044 Sum_probs=20.3
Q ss_pred CeEEEecceE-E-eccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWV-H-SGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~V-h-a~~G~~a~L~CiV~A~P 65 (70)
|.|.+..+.. . ..+|+.++|.|.+.+.|
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~ 31 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDIS 31 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEEC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcc
Confidence 5555544331 2 57899999999999985
No 437
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=86.71 E-value=0.38 Score=29.72 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=19.6
Q ss_pred eEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.+.+.+|..++|.|.+.+.|.+.|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v 31 (212)
T 1nfd_E 8 SASVTVGETVKITCSGDQLPKNFA 31 (212)
T ss_dssp EEEEETTSCCCEEEEETTGGGSCC
T ss_pred eEEEeCCCcEEEEEecCCCCCCeE
Confidence 455678999999999998887654
No 438
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=86.67 E-value=0.42 Score=30.52 Aligned_cols=18 Identities=22% Similarity=0.296 Sum_probs=15.1
Q ss_pred ccCCcEEEEEEEeeeCCCCC
Q psy15736 50 GEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 50 ~~G~~a~L~CiV~A~P~a~V 69 (70)
..|..++|.|. +.|.+.|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i 143 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEI 143 (204)
T ss_dssp EETTEEEEECS--CCCSSCE
T ss_pred ecCCcEEEEcC--CCCCCce
Confidence 37999999998 7888764
No 439
>3c5j_B MHC class II antigen; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 2q6w_B 1a6a_B* 1d5m_B* 1j8h_B* 1d5z_B* 1d5x_B* 1d6e_B* 2seb_B* 2wbj_B* 1ymm_B* 3l6f_B* 3s4s_B 3s5l_B 1fyt_B* 1seb_B 1bx2_B* 1zgl_B 1fv1_B 1h15_B* 1hqr_B ...
Probab=86.60 E-value=0.75 Score=29.67 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=21.9
Q ss_pred EeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 33 NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 33 ~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
...-||.|.+-.+-.. ..|..++|.|.|.++ |+.
T Consensus 92 ~r~~~P~v~v~~~~~~-~~~~~~~L~C~~~gFyP~~ 126 (190)
T 3c5j_B 92 QRRVHPQVTVYPAKTQ-PLQHHNLLVCSVSGFYPGS 126 (190)
T ss_dssp TCCBCCEEEEEEEC------CCCEEEEEEEEEBSSC
T ss_pred ccccCceEEEEeCCcc-ccCCceEEEEEEeeEECCc
Confidence 3456899998643322 357889999999996 543
No 440
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=86.45 E-value=1 Score=29.86 Aligned_cols=38 Identities=18% Similarity=0.066 Sum_probs=25.5
Q ss_pred eEEEEee----cCCeEEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 29 RRRRNQK----NLPEIEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 29 ~I~L~V~----ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
...|+|. .+|.|.+..+-.....|..++|.|.+.++.+
T Consensus 156 ~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~~~~p 197 (267)
T 3u1s_H 156 GTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 197 (267)
T ss_dssp CEEEEECCCCCBCCEEEEECCCGGGEETTEEEEEEEEEEEBS
T ss_pred CeEEEecCCCCCCCEEEEecCCcccCCCCcEEEEEEEeEEEC
Confidence 3456664 6888885333322346999999999998543
No 441
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=86.42 E-value=0.27 Score=31.86 Aligned_cols=30 Identities=17% Similarity=0.017 Sum_probs=20.3
Q ss_pred CCeEEEe-cceEEeccCCcEEEEEEEeee-CC
Q psy15736 37 LPEIEVE-RSWVHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 37 pPeI~v~-~~~Vha~~G~~a~L~CiV~A~-P~ 66 (70)
+|.|.+. .+.+...+|..++|.|.+.++ |.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~ 43 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSD 43 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCC
Confidence 4555432 223345689999999999996 63
No 442
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=86.25 E-value=0.14 Score=29.86 Aligned_cols=25 Identities=20% Similarity=0.073 Sum_probs=19.6
Q ss_pred ceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+.+.+.+|..++|.|.+.+.|.+.|
T Consensus 7 ~~v~v~~G~~v~L~C~~~~~~~~~v 31 (110)
T 1u3h_A 7 QSLTVWEGETAILNCSYENSAFDYF 31 (110)
Confidence 4566788999999999987765543
No 443
>1uvq_B HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_B* 1jk8_B* 2nna_B 1s9v_B 2iad_B 1muj_B* 1d9k_D* 1iak_B* 1jl4_B 1f3j_B* 2pxy_D 1k2d_B* 1u3h_D 2z31_D 3mbe_B* 1aqd_B 3pdo_B 3pgc_B 3pgd_B 1klu_B ...
Probab=86.14 E-value=0.79 Score=29.91 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=19.1
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEeee-CC
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PH 66 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~ 66 (70)
..-||.|.+-.+-.. ..|..++|.|.|.++ |+
T Consensus 91 r~~~P~V~v~~~~~~-~~~~~~~L~C~v~gFyP~ 123 (198)
T 1uvq_B 91 RRVEPTVTISPSRTE-ALNHHNLLVCSVTDFYPG 123 (198)
T ss_dssp CCBCCEEEEEEC---------CEEEEEEEEEBSS
T ss_pred ccccceEEEEecCcc-cCCCCcEEEEEEeeEeCC
Confidence 346899998754332 357889999999996 54
No 444
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=86.12 E-value=0.84 Score=26.67 Aligned_cols=27 Identities=22% Similarity=0.444 Sum_probs=19.9
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
++...+.+.+.+|+.++|.|.+...+.
T Consensus 4 v~q~p~~~~v~~G~~vtL~C~~~~~~~ 30 (112)
T 1fo0_B 4 LEQNPRWRLVPRGQAVNLRCILKNSQY 30 (112)
T ss_dssp EEEECSEEECCTTCCEEEEEEESCTTC
T ss_pred EEeCCCeEEEecCCcEEEEEEeCCCCC
Confidence 444455677889999999999865443
No 445
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=85.76 E-value=0.86 Score=33.18 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=27.0
Q ss_pred eeEEEEee----cCCeEEEecce-EEeccCCcEEEEEEEeee-CCC
Q psy15736 28 RRRRRNQK----NLPEIEVERSW-VHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 28 ~~I~L~V~----ypPeI~v~~~~-Vha~~G~~a~L~CiV~A~-P~a 67 (70)
..+.|+|. -+|.|.+..+- .....|..++|.|.+.++ |.+
T Consensus 121 ~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p 166 (512)
T 1zvo_C 121 QGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTS 166 (512)
T ss_pred CceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCc
Confidence 55678887 36888744321 112247899999999998 764
No 446
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.54 E-value=0.16 Score=28.76 Aligned_cols=22 Identities=18% Similarity=0.137 Sum_probs=17.7
Q ss_pred eEEeccCCcEEEEEEEeeeCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
.+...+|..++|.|.+.+.| +.
T Consensus 12 ~~~v~~G~~v~L~C~~~g~p-p~ 33 (99)
T 2cr3_A 12 SFLVHPGDLLQLRCRLRDDV-QS 33 (99)
T ss_dssp ECCBCTTSCEEEECCCCSSC-CE
T ss_pred CeEEeCCCcEEEEEEecCCC-Ce
Confidence 34457899999999999987 44
No 447
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=85.51 E-value=1.3 Score=28.69 Aligned_cols=35 Identities=11% Similarity=0.154 Sum_probs=0.0
Q ss_pred EEEEee-----cCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 30 RRRNQK-----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 30 I~L~V~-----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
..|.|. -+|.|.+..+ .+..++|.|.+.+ +|.+.|
T Consensus 107 t~L~V~~~~~~~~P~V~~~~~-----~~~~~~L~C~~~g~~P~p~v 147 (203)
T 2bnu_A 107 TSLIVHPYIQNPDPAVYQLRR-----SKSSDKSVCLFTDFDSQTNV 147 (203)
T ss_dssp EEEEEECCCSSCCCEEEEECC-----SSSSSCEEEEEESCCTTCCC
T ss_pred EEEEEeCCCCCCCCeEEecCC-----CCCCcEEEEEccccccCccc
No 448
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=85.39 E-value=0.47 Score=30.39 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=18.7
Q ss_pred eEEeccCCcEEEEEEEeee--CCCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAE--PHADP 69 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~--P~a~V 69 (70)
.+.+.+|..++|.|.+.+. |.+.|
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v 36 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSNYV 36 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTSCC
T ss_pred cEEEcCCCcEEEEEecCCCCCCCceE
Confidence 3666889999999999886 55443
No 449
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=85.35 E-value=0.86 Score=26.79 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=19.2
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|+.+.+ +.+.+|..++|.|.+...+
T Consensus 4 v~q~~~-~~~~~G~~v~L~C~~~~~~ 28 (120)
T 1oaq_L 4 VTQESA-LTTSPGETVTLTCRSSTGA 28 (120)
T ss_dssp EEECSE-EEECTTCEEEEEEEETTBC
T ss_pred EEcCCc-EEEcCCCCEEEEEEeCCCc
Confidence 334444 7788999999999998765
No 450
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=85.35 E-value=0.94 Score=29.04 Aligned_cols=21 Identities=14% Similarity=0.128 Sum_probs=17.1
Q ss_pred ceEEeccCCcEEEEEEEeeeC
Q psy15736 45 SWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~P 65 (70)
+.+.+.+|..++|.|.+.+.|
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~ 36 (257)
T 3gkz_A 16 GPSLVKPSQTLSLTCSVTGDS 36 (257)
T ss_dssp CCSEECTTCCEEEEEEEEESC
T ss_pred CCeEEcCCCcEEEEEEEEccc
Confidence 345578999999999999854
No 451
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=84.99 E-value=1.4 Score=26.45 Aligned_cols=18 Identities=17% Similarity=0.324 Sum_probs=16.3
Q ss_pred ccCCcEEEEEEEeeeCCC
Q psy15736 50 GEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 50 ~~G~~a~L~CiV~A~P~a 67 (70)
.+|..++|.|.+.+.|.+
T Consensus 11 ~~G~~v~l~C~~~~~~~p 28 (184)
T 3b5h_A 11 DLGSKILLTCSLNDSATE 28 (184)
T ss_dssp EETTEEEEEEEEESCSSC
T ss_pred ecCCCEEEEEECCCCCCC
Confidence 679999999999998877
No 452
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A 1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A* 1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A 2g9h_A* 1h15_A ...
Probab=84.57 E-value=1.3 Score=28.91 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=24.0
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEee-eCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHA-EPH 66 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~ 66 (70)
|...-||.|.+-..-. +..|..++|.|.|.+ +|+
T Consensus 81 l~r~~~P~v~v~~~~~-~~~~~~~~L~C~a~gFyP~ 115 (181)
T 3c5j_A 81 PITNVPPEVTVLTNSP-VELREPNVLICFIDKFTPP 115 (181)
T ss_dssp CCCCBCCEEEEEESSC-CCTTSCEEEEEEEEEEBSS
T ss_pred cccccCCceecccCCh-hhcCCCCeEEEEEeEEECC
Confidence 3445689998864321 245888999999999 454
No 453
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=84.44 E-value=0.21 Score=30.01 Aligned_cols=27 Identities=30% Similarity=0.254 Sum_probs=21.9
Q ss_pred ecceEEeccCCcEEEEEE-EeeeCC-CCC
Q psy15736 43 ERSWVHSGEGYEAQLVCI-VHAEPH-ADP 69 (70)
Q Consensus 43 ~~~~Vha~~G~~a~L~Ci-V~A~P~-a~V 69 (70)
+.+-+...+|..+.|.|. +.+.|. +.|
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v 42 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSY 42 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEE
Confidence 345667789999999999 999998 654
No 454
>3s6c_A Beta-2-microglobulin, T-cell surface glycoprotein membrane-associated; MHC, immunoglobulin domain, immune system, antigen presentat glycosylation; HET: NAG FUC; 2.90A {Homo sapiens}
Probab=84.41 E-value=1 Score=33.14 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=25.1
Q ss_pred eecCCeEEEe-cceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 34 QKNLPEIEVE-RSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 34 V~ypPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
|+-||.|.+- +.- +..|..++|.|.|.++-++.|
T Consensus 1 v~~~P~V~v~~~~~--~~~~~~~tL~C~v~~FyP~~i 35 (392)
T 3s6c_A 1 IQRTPKIQVYSRHP--AENGKSNFLNCYVSGFHPSDI 35 (392)
T ss_dssp CCBCCCCEEEESSC--CCSSSCEEEEEEEEEEBSSCC
T ss_pred CCCCCEEEEEcCCc--cccCCcEEEEEEEeeEECCCc
Confidence 4568999983 332 246888999999999877754
No 455
>2bc4_B HLA class II histocompatibility antigen, DM beta chain; MHC class II, immune system; HET: NDG BMA; 2.27A {Homo sapiens} PDB: 1hdm_B 1k8i_B*
Probab=84.38 E-value=1.4 Score=29.05 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=25.1
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHAD 68 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~ 68 (70)
|...-+|.|.+-..-. ...|..++|.|.|.++-++.
T Consensus 91 l~~~~~P~V~v~~~~~-~~~~~~~~L~C~v~gFyP~~ 126 (211)
T 2bc4_B 91 TNRTRPPSVQVAKTTP-FNTREPVMLACYVWGFYPAE 126 (211)
T ss_dssp HTCCBCCEEEEEECCC-CSCSSSEEEEEEEEEEBSSC
T ss_pred ccccCCCeeEEEeCCc-ccCCCceEEEEEEeeeECCC
Confidence 3445789999864322 23578899999999974443
No 456
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=84.21 E-value=1.3 Score=28.01 Aligned_cols=20 Identities=15% Similarity=0.017 Sum_probs=17.3
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~ 28 (220)
T 2fbj_H 9 GGLVQPGGSLKLSCAASGFD 28 (220)
T ss_dssp CEEECTTCCEEEEEEEESSC
T ss_pred CeEecCCCcEEEEEEecCcc
Confidence 46778999999999998866
No 457
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=84.19 E-value=0.71 Score=26.93 Aligned_cols=22 Identities=18% Similarity=0.145 Sum_probs=18.1
Q ss_pred eEEeccCCcEEEEEEEeeeCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a 67 (70)
.|.+.+|..++|.|.+...+.+
T Consensus 11 ~v~~~~G~~v~L~C~~~~~~~~ 32 (128)
T 3r0n_A 11 EVRGQLGGTVELPCHLLPPVPG 32 (128)
T ss_dssp EEECCTTSCEEECCEEESCCTT
T ss_pred eEEEEcCCCEEEEEEeecCCCC
Confidence 3567889999999999887654
No 458
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=84.19 E-value=0.85 Score=29.47 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=20.7
Q ss_pred ecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 43 ERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 43 ~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
....+.+.+|..++|.|.+.+.|.+.|
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v 33 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWM 33 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCE
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceE
Confidence 344677789999999999887776543
No 459
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=84.00 E-value=0.96 Score=28.69 Aligned_cols=20 Identities=20% Similarity=-0.056 Sum_probs=17.1
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~ 28 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFR 28 (225)
T ss_dssp CEEEETTCCEEEEEEEESSC
T ss_pred CeEecCCCCEEEEEEecCcc
Confidence 35678899999999999876
No 460
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=83.88 E-value=1.4 Score=26.92 Aligned_cols=26 Identities=8% Similarity=0.143 Sum_probs=20.4
Q ss_pred eEEEecceEEeccCCcEEEEEEEeee
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.|......+.+.+|+.++|.|.+.+.
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~ 44 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS 44 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC
Confidence 34555556778899999999999876
No 461
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=83.44 E-value=0.85 Score=26.47 Aligned_cols=23 Identities=17% Similarity=0.193 Sum_probs=17.8
Q ss_pred EecceEEeccCCcEEEEEEEeee
Q psy15736 42 VERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 42 v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.....+.+.+|..++|.|.+...
T Consensus 5 q~p~~~~~~~G~~vtL~C~~~~~ 27 (116)
T 1tvd_A 5 QSSPDQTVASGSEVVLLCTYDTV 27 (116)
T ss_dssp CCSCCEEEETTCCEEECCEEECC
T ss_pred cCCCcEEEecCCeEEEEeEeEcC
Confidence 33455677899999999998754
No 462
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=83.44 E-value=0.81 Score=29.67 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=19.7
Q ss_pred CeEEEecceEEeccCCcEEEEEEEee
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHA 63 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A 63 (70)
+.|..+.+.+.+.+|..++|.|.+.+
T Consensus 28 ~~v~~~p~~v~v~~G~~v~L~C~~~~ 53 (270)
T 3qib_D 28 MKVIQTPRYLVKGQGQKAKMRCIPEK 53 (270)
T ss_dssp CCCEEECSEEEEETTSCEEEEEECCT
T ss_pred eeEEeCCCeEEEcCCCCEEEEEEecC
Confidence 34445555677889999999999865
No 463
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=83.40 E-value=1.5 Score=33.41 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=30.6
Q ss_pred EeecCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 33 NQKNLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 33 ~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
.-.-.|.+..+..-+....|+.+.|.|.|.+.|.|+|
T Consensus 478 ~~~~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v 514 (573)
T 3uto_A 478 RSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVV 514 (573)
T ss_dssp GGGGSCEEEECCCCEEECTTSCEEEEEEEECSSCCEE
T ss_pred ccccCCccccCCCCcEEeCCCcEEEEEEEEccCCCeE
Confidence 3445787777766777889999999999999999976
No 464
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=83.35 E-value=0.8 Score=27.86 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=21.5
Q ss_pred CeEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 38 PEIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 38 PeI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
|.|+-+. .+.+.+|..++|.|.+...+
T Consensus 2 p~v~Qp~-~v~v~~G~~vtL~C~~s~~~ 28 (123)
T 3t0v_A 2 PVLTQSP-SVSGTPGQKVTIFCSGSSSN 28 (123)
T ss_dssp CSBEECC-CEEECTTCCEEEEEECCTTT
T ss_pred CccCccC-eEEEcCCCCEEEEEecCCCc
Confidence 6666664 67778999999999998754
No 465
>1k5n_A Major histocompatibility complex molecule HLA-B*2; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1jgd_A 1of2_A 1uxw_A 1w0w_A 3b3i_A* 3bp7_A 3czf_A* 3hcv_A* 3d18_A* 2bss_A 2bsr_A 2a83_A 1jge_A 1hsa_A 1uxs_A 1w0v_A 1ogt_A 2bst_A 3b6s_A* 3bp4_A ...
Probab=83.28 E-value=1.7 Score=30.07 Aligned_cols=31 Identities=23% Similarity=0.208 Sum_probs=23.5
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
-||.|.+-..-. .|..++|.|.|.++.++.|
T Consensus 183 ~~P~v~v~~~~~---~~~~~~L~C~~~gFyP~~i 213 (276)
T 1k5n_A 183 DPPKTHVTHHPI---SDHEATLRCWALGFYPAEI 213 (276)
T ss_dssp BCCEEEEEEEEE---ETTEEEEEEEEEEEBSSCC
T ss_pred cCceeEEEcCCC---CCCceeEEEEEeCeECCcE
Confidence 578888865432 4669999999999877654
No 466
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=83.25 E-value=0.43 Score=30.37 Aligned_cols=42 Identities=7% Similarity=-0.185 Sum_probs=18.5
Q ss_pred hcCcCCCccceeeeEEEEe-ecCCeEEEecceEEeccCCcEEE
Q psy15736 16 EEEPEKDKEEVRRRRRRNQ-KNLPEIEVERSWVHSGEGYEAQL 57 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V-~ypPeI~v~~~~Vha~~G~~a~L 57 (70)
-|.+.+....+++.+.|.| ..+|.+.+..+......|+.+..
T Consensus 217 ~C~a~n~~g~~~~~~~l~V~~~~p~~~~~p~~~~~~~~q~~~~ 259 (268)
T 3mj6_A 217 TCSIYVGKLESRKTIVLHVVQDEFQRTISPTPPTDKGQQGILN 259 (268)
T ss_dssp EEEEEETTEEEEEEEEEEEECC---------------------
T ss_pred EEEEEcCCceEEEEEEEEEEcCCCeeeeCCCCCCCCcceeccc
Confidence 4888888888999999999 77888888888888888887653
No 467
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=83.21 E-value=0.19 Score=31.99 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=22.1
Q ss_pred CCeEEEe-cceEEeccCCcEEEEEEEeeeCC
Q psy15736 37 LPEIEVE-RSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 37 pPeI~v~-~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
+|.|.+. .+.+.+.+|..++|.|.+.+.|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p 33 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRD 33 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCS
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeEC
Confidence 5666555 33344578999999999999864
No 468
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=83.17 E-value=1.8 Score=25.21 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=15.8
Q ss_pred eEEeccCCcEEEEEEEeee
Q psy15736 46 WVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~ 64 (70)
.+.+.+|..++|.|.+.+.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~ 27 (120)
T 1n4x_H 9 PELKKPGETVKISCKATNY 27 (120)
T ss_dssp CEEECTTCCEEEEEEEESS
T ss_pred CEEEcCCCeEEEEEEecCc
Confidence 3667899999999999754
No 469
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=83.04 E-value=1.4 Score=25.64 Aligned_cols=25 Identities=8% Similarity=0.106 Sum_probs=18.4
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
++.+.+ +.+.+|..++|.|.+...+
T Consensus 4 v~q~~~-~~~~~G~~vtL~C~~~~~~ 28 (116)
T 1a2y_B 4 LQESGP-GLVAPSQSLSITCTVSGFS 28 (116)
T ss_dssp EEEECC-SEECTTSCEEEEEEEESSC
T ss_pred EEcCCC-EEEeCCCcEEEEEEEcCCC
Confidence 344433 5678999999999998654
No 470
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=83.01 E-value=0.94 Score=28.05 Aligned_cols=26 Identities=15% Similarity=0.295 Sum_probs=19.4
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|+.+.+ +.+.+|..++|.|.+...+
T Consensus 8 ~v~q~~~-v~v~~G~~vtL~C~~~~~~ 33 (135)
T 1p4b_L 8 VVTQESA-LTTSPGETVTLTCRSSTGA 33 (135)
T ss_dssp CEECCSE-EEECTTCEEEEEEEETTSS
T ss_pred eEEECCc-EEEcCCCCEEEEEEecCCC
Confidence 3444444 7778999999999998764
No 471
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=82.90 E-value=1.8 Score=27.89 Aligned_cols=35 Identities=6% Similarity=0.142 Sum_probs=0.0
Q ss_pred EEEEee-----cCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 30 RRRNQK-----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 30 I~L~V~-----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
..|.|. -.|.|.+..+ ....++|.|.+.+ +|.+.|
T Consensus 108 t~L~V~~~~~~~~P~V~~~~~-----~~~~~tL~Cl~~gf~P~~~V 148 (194)
T 1lp9_E 108 TSLSVVPNIQNPEPAVYQLKD-----PRSQDSTLCLFTDFDSQINV 148 (194)
T ss_dssp EEEEEECCCSSCCCEEEEEEC-----TTSSSCEEEEEESCCTTSCC
T ss_pred ceEEecCcCCCCCCeeEecCC-----CCCCcEEEEEeecccCCccc
No 472
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=82.80 E-value=0.5 Score=26.37 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=18.2
Q ss_pred eEEeccCCcEEEEEEEeeeCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.+.+|..++|.|.+.+.|.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~ 24 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSG 24 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTC
T ss_pred CEEEEcCCCEEEEEEeECCCCC
Confidence 4677899999999999887644
No 473
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=82.79 E-value=1.8 Score=25.27 Aligned_cols=28 Identities=25% Similarity=0.234 Sum_probs=22.3
Q ss_pred eecCCeEEEecceEEeccCCcEEEEEEEe
Q psy15736 34 QKNLPEIEVERSWVHSGEGYEAQLVCIVH 62 (70)
Q Consensus 34 V~ypPeI~v~~~~Vha~~G~~a~L~CiV~ 62 (70)
..-+|.|+...+++- ..|..++|.|...
T Consensus 6 ~~pkPsL~a~P~~vv-~~G~~VtL~C~~~ 33 (106)
T 3kgr_A 6 DLPRPSISAEPGTVI-PLGSHVTFVCRGP 33 (106)
T ss_dssp CCCCCEEEEESCSEE-ETTCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCcc-CCCCeEEEEEEcc
Confidence 345799999987765 5699999999864
No 474
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=82.49 E-value=0.55 Score=26.78 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=17.6
Q ss_pred eEEeccCCcEEEEEEEeeeCCC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEPHA 67 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P~a 67 (70)
-|.+.+|..++|.|.+.+.|.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~ 24 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQ 24 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCC
T ss_pred EEEEEeCCCEEEEeEeCCCCcC
Confidence 3667889999999999876643
No 475
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=82.49 E-value=0.74 Score=26.91 Aligned_cols=21 Identities=10% Similarity=0.237 Sum_probs=17.5
Q ss_pred cceEEeccCCcEEEEEEEeee
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~ 64 (70)
...+.+.+|..++|.|.+...
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~ 27 (116)
T 1fo0_A 7 QTSISVMEKTTVTMDCVYETQ 27 (116)
T ss_dssp CCEEEEETTCCEEECCEECCC
T ss_pred CCcEEEecCCcEEEEeEecCC
Confidence 445777899999999999876
No 476
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=82.47 E-value=1.8 Score=27.22 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=20.7
Q ss_pred EEEecceEEeccCCcEEEEEEEeeeCC
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~P~ 66 (70)
|+.....+.+.+|..++|.|.+...+.
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~ 29 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVN 29 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCT
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCc
Confidence 444455677889999999999987653
No 477
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=82.33 E-value=1.1 Score=27.84 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=16.3
Q ss_pred EEeccCCcEEEEEEEeeeC
Q psy15736 47 VHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 47 Vha~~G~~a~L~CiV~A~P 65 (70)
+.+.+|..++|.|.+.+.|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~ 28 (219)
T 1c1e_H 10 ELKKPGETVKISCKASGYM 28 (219)
T ss_dssp EEECTTCCEEEEEEEESSC
T ss_pred eEecCCCcEEEEEEEeCcc
Confidence 4567899999999999876
No 478
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=82.32 E-value=1.3 Score=28.91 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=16.9
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.|
T Consensus 9 ~~~v~~G~~v~L~C~~~g~~ 28 (256)
T 1nqb_A 9 AELVKPGASVKLSCKASGYT 28 (256)
T ss_dssp CEEECTTCCEEEEEEECSSC
T ss_pred CeeecCCCcEEEEEEecccc
Confidence 35568899999999999876
No 479
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=82.29 E-value=0.37 Score=28.76 Aligned_cols=19 Identities=21% Similarity=0.391 Sum_probs=16.1
Q ss_pred EeccCCcEEEEEEEeeeCC
Q psy15736 48 HSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 48 ha~~G~~a~L~CiV~A~P~ 66 (70)
.+..|..++|.|.+.+.|.
T Consensus 10 v~~~G~~v~L~C~~~g~P~ 28 (82)
T 3r08_E 10 VSISGTSVELTCPLDSDEN 28 (82)
T ss_dssp EEEETTEEEEECSSCCCSS
T ss_pred EEEcCCeEEEEEECCCCCc
Confidence 3456999999999999994
No 480
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=82.17 E-value=1.5 Score=25.95 Aligned_cols=26 Identities=19% Similarity=0.302 Sum_probs=21.0
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEee
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHA 63 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A 63 (70)
++.|..+.+ |.+.+|..++|.|.+..
T Consensus 4 ~~~v~~~~~-v~~~~G~~v~L~C~~~~ 29 (117)
T 3q0h_A 4 TGTIETTGN-ISAEKGGSIILQCHLSS 29 (117)
T ss_dssp SCEEEESCC-EEEETTCCEEECEEEES
T ss_pred eEEEEccCC-EEEecCCCEEEEEEecC
Confidence 566777765 56688999999999986
No 481
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=81.98 E-value=1.9 Score=26.11 Aligned_cols=25 Identities=12% Similarity=0.347 Sum_probs=18.8
Q ss_pred EEEecceEEeccCCcEEEEEEEeee
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
|+.....+.+.+|..++|.|.+.+.
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~ 27 (121)
T 2i24_N 3 VDQTPQRITKETGESLTINCVVRDS 27 (121)
T ss_dssp EEEECSEEEEETTCCEEEEEEECSC
T ss_pred cEECCcEEEEecCCcEEEEeEccCC
Confidence 3343455677899999999999765
No 482
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=81.81 E-value=1.4 Score=28.19 Aligned_cols=20 Identities=15% Similarity=0.109 Sum_probs=17.1
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.|
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~ 28 (227)
T 1mju_H 9 AELVKPGASVKLSCKASGYT 28 (227)
T ss_dssp EEEECTTCCEEEEEEEESSC
T ss_pred CeEEcCCCCEEEEEEecCCc
Confidence 45578899999999999876
No 483
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=81.78 E-value=2.4 Score=24.67 Aligned_cols=24 Identities=13% Similarity=-0.000 Sum_probs=17.8
Q ss_pred EEEecceEEeccCCcEEEEEEEeee
Q psy15736 40 IEVERSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 40 I~v~~~~Vha~~G~~a~L~CiV~A~ 64 (70)
++.+. .+.+.+|..++|.|.+...
T Consensus 4 v~qp~-~~~~~~G~~vtL~C~~~~~ 27 (120)
T 3b9v_A 4 LVESG-GGLVQPGGSLRLSCAASGF 27 (120)
T ss_dssp EEEEC-CEEECTTCCEEEEEEEESS
T ss_pred EECCC-CEEEeCCccEEEEEEeeCc
Confidence 34444 3567899999999999754
No 484
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=81.77 E-value=1.2 Score=25.79 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=16.9
Q ss_pred cceEEeccCCcEEEEEEEeee
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~ 64 (70)
.+.+.+.+|..++|.|.+.+.
T Consensus 5 p~~~~~~~G~~vtL~C~~~~~ 25 (115)
T 2atp_B 5 PSSLLVQTNHTAKMSCEVKSI 25 (115)
T ss_dssp CSEEEECTTSCEEEEEECCSS
T ss_pred CCCEEEcCCCcEEEEEEecCC
Confidence 345667899999999999764
No 485
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Probab=81.58 E-value=1.9 Score=28.72 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=24.7
Q ss_pred EEeecCCeEEEecceEEeccCCcEEEEEEEeee-CCC
Q psy15736 32 RNQKNLPEIEVERSWVHSGEGYEAQLVCIVHAE-PHA 67 (70)
Q Consensus 32 L~V~ypPeI~v~~~~Vha~~G~~a~L~CiV~A~-P~a 67 (70)
|...-||.|.+-..-. ...|..++|.|.|.++ |+.
T Consensus 84 l~~~~~P~V~v~~~~~-~~~~~~~tL~C~a~gFyP~~ 119 (197)
T 1uvq_A 84 AATNEVPEVTVFSKSP-VTLGQPNTLICLVDNIFPPV 119 (197)
T ss_dssp CCCCCCCEEEEEESSC-CCTTSCEEEEEEEEEECSSC
T ss_pred ccccCCCCcccccCCc-cccCCccEEEEEEEeEcCCC
Confidence 4456789998865421 2357889999999995 543
No 486
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=81.46 E-value=1.3 Score=28.33 Aligned_cols=22 Identities=14% Similarity=0.092 Sum_probs=17.5
Q ss_pred cceEEeccCCcEEEEEEEeeeC
Q psy15736 44 RSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 44 ~~~Vha~~G~~a~L~CiV~A~P 65 (70)
..-+.+.+|..++|.|.+.+.|
T Consensus 8 p~~~~v~~G~~v~L~C~~~g~~ 29 (253)
T 3uzq_A 8 SGAELVKPGASVRLSCTASGFN 29 (253)
T ss_dssp CCCEEECTTCCEEEEEEECSSC
T ss_pred CCCeeecCCCcEEEEEEeeCCc
Confidence 3445678899999999998854
No 487
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=81.39 E-value=0.45 Score=27.40 Aligned_cols=29 Identities=3% Similarity=-0.075 Sum_probs=23.0
Q ss_pred hcCcCCCccceeeeEEEEeecCCeEEEec
Q psy15736 16 EEEPEKDKEEVRRRRRRNQKNLPEIEVER 44 (70)
Q Consensus 16 ~~~~~~~~~pvs~~I~L~V~ypPeI~v~~ 44 (70)
.|.+.+......+.+.|.|..+|.|.+..
T Consensus 90 ~C~a~n~~g~~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 90 TCAASSGLMTKKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEECC----
T ss_pred EEEEccCCCceEEEEEEEEeccCeEEeec
Confidence 58899988889999999999999998764
No 488
>1onq_A T-cell surface glycoprotein CD1A; protein-glycolipid complex, beta sheet platform,, immune SYS; HET: NAG FUC SLF; 2.15A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1xz0_A*
Probab=81.34 E-value=2 Score=29.96 Aligned_cols=30 Identities=30% Similarity=0.247 Sum_probs=21.9
Q ss_pred cCCeEEEecceEEeccCCcEEEEEEEee-eCCC
Q psy15736 36 NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHA 67 (70)
Q Consensus 36 ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a 67 (70)
-||.|.+-..- +..|..++|.|.|.+ +|+.
T Consensus 185 ~~P~v~v~~~~--~~~~~~~~L~C~a~gFyP~~ 215 (283)
T 1onq_A 185 VKPEAWLSHGP--SPGPGHLQLVCHVSGFYPKP 215 (283)
T ss_dssp BCCEEEEEEEC--CCSTTEEEEEEEEEEEBSSC
T ss_pred cCceEEEEecc--CCCCCceeEEEEEEeEECCc
Confidence 57888886432 234678999999999 5654
No 489
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=81.24 E-value=1.4 Score=25.29 Aligned_cols=21 Identities=14% Similarity=0.234 Sum_probs=17.2
Q ss_pred ceEEeccCCcEEEEEE-EeeeC
Q psy15736 45 SWVHSGEGYEAQLVCI-VHAEP 65 (70)
Q Consensus 45 ~~Vha~~G~~a~L~Ci-V~A~P 65 (70)
+.+.+.+|..++|.|. +.+.|
T Consensus 8 ~~~~v~~G~~v~L~C~v~~~~~ 29 (109)
T 1pew_A 8 HSVSESPGKTVTISCTRSSGNI 29 (109)
T ss_dssp SEEEECTTSCEEEEEEESSSCG
T ss_pred CCEEEcCCCCEEEEEEeCCCCC
Confidence 4567789999999999 77665
No 490
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=81.22 E-value=0.59 Score=30.21 Aligned_cols=26 Identities=15% Similarity=0.028 Sum_probs=20.7
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEe
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVH 62 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~ 62 (70)
.|.|..+...+.+.+|..++|.|.+.
T Consensus 26 ~~~v~~~p~~v~v~~G~~v~L~C~~~ 51 (268)
T 3pl6_D 26 GAGVSQTPSNKVTEKGKYVELRCDPI 51 (268)
T ss_dssp -SSCBCCCSEEEEETTCCEEEEEBCB
T ss_pred CceeEeCCCEEEecCCCCEEEEEEeC
Confidence 45566666778889999999999986
No 491
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=81.17 E-value=2.2 Score=25.54 Aligned_cols=27 Identities=11% Similarity=0.047 Sum_probs=20.4
Q ss_pred eEEEecceEEeccCCcEEEEEEEeeeC
Q psy15736 39 EIEVERSWVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 39 eI~v~~~~Vha~~G~~a~L~CiV~A~P 65 (70)
.|+.+...+.+.+|..++|.|.+...+
T Consensus 7 ~V~Q~p~~~~v~~G~~vtL~C~~~~~~ 33 (125)
T 3r8b_B 7 AVTQSPRNKVAVTGEKVTLSCKQTNSY 33 (125)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCC
T ss_pred cEEecCCeEEEcCCCcEEEEEEECCCC
Confidence 345555667778999999999987654
No 492
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=80.83 E-value=2.7 Score=27.47 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=24.0
Q ss_pred EEEEee-----cCCeEEEecceEEeccCCcEEEEEEEee-eCCCCC
Q psy15736 30 RRRNQK-----NLPEIEVERSWVHSGEGYEAQLVCIVHA-EPHADP 69 (70)
Q Consensus 30 I~L~V~-----ypPeI~v~~~~Vha~~G~~a~L~CiV~A-~P~a~V 69 (70)
..|.|. -+|.|.+..+. +..++|.|.+.+ +|.+.|
T Consensus 111 t~L~V~~~~~~~~P~V~~~~~~-----~~~vtL~Cl~~gf~P~~~v 151 (211)
T 2ak4_D 111 TRLQVFPNIQNPDPAVYQLRDS-----KSSDKSVCLFTDFDSQTNV 151 (211)
T ss_dssp EEEEEECCCSSCCCEEEEEBCC-----SSSCCEEEEEESCCTTCCC
T ss_pred EEEEEeCcCCCCCCEEEEccCC-----CCceEEEEEeeeecCCccc
Confidence 456664 45788776542 347999999998 777654
No 493
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=80.76 E-value=2.5 Score=25.17 Aligned_cols=20 Identities=15% Similarity=0.042 Sum_probs=16.3
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.+
T Consensus 11 ~~~v~~G~~vtL~C~~s~~~ 30 (121)
T 2xt1_B 11 GGLVQAGGSLRLSCAASGSF 30 (121)
T ss_dssp CEEEETTCCEEEEEEEESSS
T ss_pred CEEEeCCCCEEEEEEecCee
Confidence 45678899999999998644
No 494
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=80.67 E-value=2.6 Score=24.33 Aligned_cols=19 Identities=16% Similarity=-0.025 Sum_probs=15.7
Q ss_pred eEEeccCCcEEEEEEEeee
Q psy15736 46 WVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~ 64 (70)
.+.+.+|..++|.|.+...
T Consensus 9 ~~~~~~G~~vtL~C~~~~~ 27 (117)
T 2yc1_A 9 GGLVQPGGSLRLSCTGSGF 27 (117)
T ss_dssp CEEECTTCCEEEEEEEESS
T ss_pred CEEEcCCCeEEEEEEecCc
Confidence 3567889999999999754
No 495
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=80.52 E-value=2.5 Score=24.71 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=16.1
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+.+.+
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~ 28 (121)
T 1j05_H 9 AELVEPGASVKLSCTASGFN 28 (121)
T ss_dssp CEEECTTCCEEEEEEEESSC
T ss_pred CEEEeCCCcEEEEEEecCcc
Confidence 34668899999999998643
No 496
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=80.43 E-value=0.3 Score=34.79 Aligned_cols=31 Identities=26% Similarity=0.258 Sum_probs=25.8
Q ss_pred CCeEEEecceEEeccCCcEEEEEEEeeeCCCCC
Q psy15736 37 LPEIEVERSWVHSGEGYEAQLVCIVHAEPHADP 69 (70)
Q Consensus 37 pPeI~v~~~~Vha~~G~~a~L~CiV~A~P~a~V 69 (70)
+|.|....+-+...+|..++|.|.+. |.|.|
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i 382 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSV 382 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEE
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcE
Confidence 57777776778889999999999988 87754
No 497
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=80.27 E-value=2.3 Score=26.26 Aligned_cols=29 Identities=14% Similarity=0.106 Sum_probs=18.2
Q ss_pred cCCeEEEe-cceEEeccCCcEEEEEEEeee
Q psy15736 36 NLPEIEVE-RSWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 36 ypPeI~v~-~~~Vha~~G~~a~L~CiV~A~ 64 (70)
|..+|.+. .+.+.+.+|..++|.|.+...
T Consensus 2 ~~~~~~l~q~~~~~v~~G~~vtL~C~~s~~ 31 (136)
T 3tpk_A 2 YKDEVQLVESGGGSVQPGGSLRLSCTASGY 31 (136)
T ss_dssp ---CEEEEEECCEEECTTCCEEEEEEEEES
T ss_pred CCccEEEEeeCCEEEccCCCEEEEEEEccc
Confidence 34444333 234567899999999998753
No 498
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=80.07 E-value=0.4 Score=29.62 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=16.8
Q ss_pred EEeccCCcEEEEEEEeeeCC
Q psy15736 47 VHSGEGYEAQLVCIVHAEPH 66 (70)
Q Consensus 47 Vha~~G~~a~L~CiV~A~P~ 66 (70)
+...+|..++|.|.+.+.|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~ 29 (231)
T 2pet_A 10 VEVMRGKSVILDCTPTGTHD 29 (231)
T ss_dssp EEEETTCCEEECCCCBSCCS
T ss_pred EEEEcCCCEEEecccCCCCC
Confidence 44477999999999999885
No 499
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=79.92 E-value=2.2 Score=24.77 Aligned_cols=20 Identities=25% Similarity=0.358 Sum_probs=16.6
Q ss_pred ceEEeccCCcEEEEEEEeee
Q psy15736 45 SWVHSGEGYEAQLVCIVHAE 64 (70)
Q Consensus 45 ~~Vha~~G~~a~L~CiV~A~ 64 (70)
+.+.+.+|..++|.|.+...
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~ 28 (115)
T 2otu_A 9 SSASFSLGASAKLTCTLSSQ 28 (115)
T ss_dssp CCEECCTTCCEEEEEEECGG
T ss_pred CCEEECCCCCEEEEEEecCC
Confidence 45677899999999999765
No 500
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=79.74 E-value=1.1 Score=26.22 Aligned_cols=20 Identities=30% Similarity=0.342 Sum_probs=16.8
Q ss_pred eEEeccCCcEEEEEEEeeeC
Q psy15736 46 WVHSGEGYEAQLVCIVHAEP 65 (70)
Q Consensus 46 ~Vha~~G~~a~L~CiV~A~P 65 (70)
.+.+.+|..++|.|.+...+
T Consensus 16 ~v~v~~G~~v~L~C~~~~~~ 35 (120)
T 3noi_A 16 EIRTLEGSSAFLPCSFNASQ 35 (120)
T ss_dssp EEEEETTSCEEECCEECCCT
T ss_pred EEEEEcCCCEEEEeeecCCC
Confidence 46678899999999998765
Done!